BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019423
(341 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225461322|ref|XP_002284546.1| PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic
protein 2 [Vitis vinifera]
gi|302143076|emb|CBI20371.3| unnamed protein product [Vitis vinifera]
Length = 358
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 260/361 (72%), Positives = 292/361 (80%), Gaps = 23/361 (6%)
Query: 1 MSLLINQS-----VHFSRISCHQRSTAYGKQMAPGVSVHKSHSVAK---KSIRCFS---- 48
M+L+IN F + S H+ T GK P V V K ++A+ + I S
Sbjct: 1 MNLVINHRHSSYGTPFCKFSSHKHET--GKYKVP-VRVPKRSAMAEDLTQDIVSLSKTEK 57
Query: 49 TNTFL--------STLTVANLAAIGNAKALTMENVLEGAASVYTMADGSLGDMFGGFLYS 100
+ +FL + A AKA ++++LEGA SVYT+ADGS+GD FGGFLYS
Sbjct: 58 SGSFLIKTAATSSAFAAANFFATTDMAKAANIKDILEGATSVYTLADGSIGDWFGGFLYS 117
Query: 101 AGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQI 160
AGQQAN AV QLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGK RA++
Sbjct: 118 AGQQANAAVQDQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKGRAEV 177
Query: 161 IGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP 220
IG+S+AFSLGLATTLA+LGV ASFAGKAYGQIG GLPLAASGLA++MGLNLLEIIELQLP
Sbjct: 178 IGNSVAFSLGLATTLAILGVAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLP 237
Query: 221 SFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLL 280
SFF+NFDPR+AAAN PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDP+IGG+LL
Sbjct: 238 SFFNNFDPRSAAANLPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLL 297
Query: 281 LSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFPTTMA 340
L+YTTGYVAPLLLAASFAGALQSLLSFRKFS+WINP SGALLLGGG+YT LDRLFPT+M
Sbjct: 298 LTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINPTSGALLLGGGIYTLLDRLFPTSMV 357
Query: 341 M 341
M
Sbjct: 358 M 358
>gi|255580440|ref|XP_002531046.1| Thiol:disulfide interchange protein dsbD precursor, putative
[Ricinus communis]
gi|223529374|gb|EEF31339.1| Thiol:disulfide interchange protein dsbD precursor, putative
[Ricinus communis]
Length = 350
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 260/350 (74%), Positives = 297/350 (84%), Gaps = 9/350 (2%)
Query: 1 MSLLINQSV------HFSRISCHQRSTAYGKQMAPGVSVHKSH-SVAKKSIRCFST-NTF 52
MSLLINQSV + + + H + A GK + ++ ++ S++K RC S T
Sbjct: 1 MSLLINQSVSCYLNNNNGQRTNHSKEKATGKLSSTNENLRRNVLSLSKNDSRCSSRIKTI 60
Query: 53 LSTLTVANLAAIGNAKALTMENVLEGAA-SVYTMADGSLGDMFGGFLYSAGQQANEAVLG 111
++L V+NL I AKA++ + +LE A +YT+ADG +GD G LYSAGQQANEAV
Sbjct: 61 ATSLAVSNLINIDAAKAVSTDKLLEEATIYMYTLADGGIGDWLGRLLYSAGQQANEAVQD 120
Query: 112 QLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGL 171
QLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRA+++ DSIAF+LGL
Sbjct: 121 QLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEVVADSIAFALGL 180
Query: 172 ATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAA 231
ATTLALLG+GASFAGKAYGQIG GLPLAASGLA++MGLNLLEIIELQLPSFF+NFDPRAA
Sbjct: 181 ATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRAA 240
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVA SKDP++GG+LLL+YTTGYVAPL
Sbjct: 241 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKDPIVGGSLLLTYTTGYVAPL 300
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFPTTMAM 341
LLAASFAGALQSLLSFRKFS+WINPMSGALLLGGG+YTFLDRLFP +M+M
Sbjct: 301 LLAASFAGALQSLLSFRKFSAWINPMSGALLLGGGVYTFLDRLFPVSMSM 350
>gi|356517207|ref|XP_003527280.1| PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic
protein 2-like [Glycine max]
Length = 344
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 263/352 (74%), Positives = 295/352 (83%), Gaps = 23/352 (6%)
Query: 1 MSLLINQSVHFSR---ISC--HQRSTAYGKQMAPGVSVHKSHSVAKKSIRC-FSTN---- 50
MSL N S+ +SC HQ G+ + P ++ H+ S +K +R + N
Sbjct: 5 MSLCGNYSLQLQNRRIVSCNLHQD----GRHIVP-INTHQKPSKPEKCLRSKWKINGNNI 59
Query: 51 -TFLSTLTVANLAAIGNAKALTMENVLEGAASVYTMADGSLGDMFGGFLYSAGQQANEAV 109
T + +TVA+L A AKA E AAS+Y +ADGSLGD FGGFL+SAGQQANEAV
Sbjct: 60 GTCIGVMTVAHLVAPVAAKA-------EVAASIYALADGSLGDWFGGFLFSAGQQANEAV 112
Query: 110 LGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSL 169
GQL++LSFTSLAVI+GAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ++GDSIAFSL
Sbjct: 113 QGQLTSLSFTSLAVIYGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQVVGDSIAFSL 172
Query: 170 GLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR 229
GLATTLALLGVGASFAGKAYGQIG GLPLAASGLAI+MGLNLLEIIEL+LPSFFD+FDPR
Sbjct: 173 GLATTLALLGVGASFAGKAYGQIGQGLPLAASGLAIIMGLNLLEIIELRLPSFFDSFDPR 232
Query: 230 AAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVA 289
AAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVA SKDP+IGG+LLL+YTTGYV+
Sbjct: 233 AAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKDPVIGGSLLLTYTTGYVS 292
Query: 290 PLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFPTTMAM 341
PLLLAASFAGALQSLLSFRKFS+WINP+SGA+LLGGG+YTFLDRLFP TM M
Sbjct: 293 PLLLAASFAGALQSLLSFRKFSAWINPISGAMLLGGGVYTFLDRLFPVTMVM 344
>gi|358249182|ref|NP_001240262.1| cytochrome c-type biogenesis ccda-like chloroplastic protein 2-like
[Glycine max]
gi|32402380|gb|AAP81162.1| c-type cytochrome biogenesis protein [Glycine max]
gi|255636862|gb|ACU18764.1| unknown [Glycine max]
Length = 344
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 255/336 (75%), Positives = 286/336 (85%), Gaps = 20/336 (5%)
Query: 14 ISC--HQRSTAYGKQMAPGVSVHKSHSVAKKSIRCF------STNTFLSTLTVANLAAIG 65
+SC HQ G+ + P ++ H+ S + +R + T + +TVA+L A
Sbjct: 21 VSCNLHQD----GRHIVP-INTHQKTSKPENCLRSKWKINGNNIRTCIGVMTVAHLVAPV 75
Query: 66 NAKALTMENVLEGAASVYTMADGSLGDMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIF 125
AKA E AAS+Y +ADGSL D FGGFLYSAGQQANEAV GQL++LSFTSLAVI+
Sbjct: 76 TAKA-------EVAASIYALADGSLNDWFGGFLYSAGQQANEAVQGQLTSLSFTSLAVIY 128
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFA 185
GAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRA+++GDSIAFSLGLATTLALLGVGASFA
Sbjct: 129 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEVVGDSIAFSLGLATTLALLGVGASFA 188
Query: 186 GKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAG 245
GKAYGQIG GLPLAASGLAI+MGLNLLEIIEL+LPSFFD+FDPRAAAANFPSSVQAYLAG
Sbjct: 189 GKAYGQIGQGLPLAASGLAIIMGLNLLEIIELRLPSFFDSFDPRAAAANFPSSVQAYLAG 248
Query: 246 LTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLL 305
LTFALAASPCSTPVLATLLGYVA SKDP+IGG+LLL+YTTGYV+PLLLAASFAGALQSLL
Sbjct: 249 LTFALAASPCSTPVLATLLGYVAASKDPVIGGSLLLTYTTGYVSPLLLAASFAGALQSLL 308
Query: 306 SFRKFSSWINPMSGALLLGGGLYTFLDRLFPTTMAM 341
SFRKFS+WINP+SGA+LLGGG+YTFLDRLFP TM M
Sbjct: 309 SFRKFSAWINPISGAMLLGGGVYTFLDRLFPVTMVM 344
>gi|255646784|gb|ACU23864.1| unknown [Glycine max]
Length = 340
Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust.
Identities = 261/352 (74%), Positives = 293/352 (83%), Gaps = 23/352 (6%)
Query: 1 MSLLINQSVHFSR---ISC--HQRSTAYGKQMAPGVSVHKSHSVAKKSIRC-FSTN---- 50
MSL N + +SC HQ G+ + P ++ H+ S +K +R + N
Sbjct: 1 MSLCGNYGLQLQNRRIVSCNLHQD----GRHIVP-INTHQKPSKPEKCLRSKWKINGNNI 55
Query: 51 -TFLSTLTVANLAAIGNAKALTMENVLEGAASVYTMADGSLGDMFGGFLYSAGQQANEAV 109
T + +TVA+L A AKA E AAS+Y +ADGSLGD FGGFL+SAGQQANEAV
Sbjct: 56 GTCIGVMTVAHLVAPVAAKA-------EVAASIYALADGSLGDWFGGFLFSAGQQANEAV 108
Query: 110 LGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSL 169
GQL++LSFTSLAVI+GAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ++GDSIAFSL
Sbjct: 109 QGQLTSLSFTSLAVIYGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQVVGDSIAFSL 168
Query: 170 GLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR 229
GLATTLALLGVGASFAGKAYGQIG GLPLAASGLAI+MGLNLLEIIEL+LPSFFD+FDPR
Sbjct: 169 GLATTLALLGVGASFAGKAYGQIGQGLPLAASGLAIIMGLNLLEIIELRLPSFFDSFDPR 228
Query: 230 AAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVA 289
AAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVA SKDP+I G+LLL+YTTGYV+
Sbjct: 229 AAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKDPVIRGSLLLTYTTGYVS 288
Query: 290 PLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFPTTMAM 341
PLLLAASFAGALQSLLSFRKFS+WINP+SGA+LLGGG+YTFLDRLFP TM M
Sbjct: 289 PLLLAASFAGALQSLLSFRKFSAWINPISGAMLLGGGVYTFLDRLFPVTMVM 340
>gi|27464259|gb|AAO16018.1| chloroplast biogenesis protein [Lotus japonicus]
Length = 345
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 251/326 (76%), Positives = 282/326 (86%), Gaps = 15/326 (4%)
Query: 23 YGKQMAPGVSVHKSHSVAKKSIRC-FSTN-----TFLSTLTVANLAAIGNAKALTMENVL 76
+G+ + P ++VHK S + ++ + +N TF+ +T ANL A AKA
Sbjct: 28 HGRHVVP-INVHKKASEPENCLQSDWKSNGNNIRTFIGAMTAANLVAPIAAKA------- 79
Query: 77 EGAASVYTMADGSLGDMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPC 136
E AAS Y +ADGS+ D FGG LYSAGQQANEAVL QLS+LSFTSLAVIFGAGLVTSLSPC
Sbjct: 80 EVAASFYDLADGSINDWFGGILYSAGQQANEAVLDQLSSLSFTSLAVIFGAGLVTSLSPC 139
Query: 137 TLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGL 196
TLSVLPLTLGYIGAFGSGKSRA++IGDSIAFSLGLATTLALLGV ASFAGKAYGQIG GL
Sbjct: 140 TLSVLPLTLGYIGAFGSGKSRAEVIGDSIAFSLGLATTLALLGVAASFAGKAYGQIGQGL 199
Query: 197 PLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCS 256
PLAASGLA++MGLNLLEIIELQLPSFFD+FDPR+ AAN PSSVQAYLAGLTFALAASPCS
Sbjct: 200 PLAASGLAVIMGLNLLEIIELQLPSFFDSFDPRSVAANLPSSVQAYLAGLTFALAASPCS 259
Query: 257 TPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINP 316
TPVLATLLGYVA SKDP+IGG+LLL+YTTGY+APLLLAASFAGALQSLLSFRK+S+WINP
Sbjct: 260 TPVLATLLGYVAASKDPVIGGSLLLTYTTGYIAPLLLAASFAGALQSLLSFRKYSAWINP 319
Query: 317 MSGALLLGGGLYTFLDRLFP-TTMAM 341
+SGA+LLGGG+YTFLD+LFP TTMAM
Sbjct: 320 ISGAMLLGGGVYTFLDKLFPATTMAM 345
>gi|224122910|ref|XP_002330394.1| predicted protein [Populus trichocarpa]
gi|222871779|gb|EEF08910.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/265 (90%), Positives = 256/265 (96%)
Query: 77 EGAASVYTMADGSLGDMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPC 136
E AASVYT+ADGS+GD FGGFLYS+GQQANEAV QLSALSFTSLAVIFGAGLVTSLSPC
Sbjct: 1 EEAASVYTLADGSIGDWFGGFLYSSGQQANEAVQDQLSALSFTSLAVIFGAGLVTSLSPC 60
Query: 137 TLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGL 196
TLSVLPLTLGYIGAFGSGKSRA+I+GDSIAF+LGLATTLALLG+ ASFAGK YGQIG GL
Sbjct: 61 TLSVLPLTLGYIGAFGSGKSRAEIVGDSIAFALGLATTLALLGIAASFAGKTYGQIGQGL 120
Query: 197 PLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCS 256
PLAASGLA++MGLNLLE+IELQLPSFF+NFDPRAAAANFPSSVQAYLAGLTFALAASPCS
Sbjct: 121 PLAASGLAVIMGLNLLEVIELQLPSFFNNFDPRAAAANFPSSVQAYLAGLTFALAASPCS 180
Query: 257 TPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINP 316
TPVLATLLGYVA SKDP++GG+LLL+YTTGYVAPLLLAASFAGALQSLLSFRKFS+WINP
Sbjct: 181 TPVLATLLGYVAASKDPVVGGSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINP 240
Query: 317 MSGALLLGGGLYTFLDRLFPTTMAM 341
MSGALLLGGG+YTFLDRLFP TMAM
Sbjct: 241 MSGALLLGGGVYTFLDRLFPPTMAM 265
>gi|449463144|ref|XP_004149294.1| PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic
protein 2-like [Cucumis sativus]
gi|449528927|ref|XP_004171453.1| PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic
protein 2-like [Cucumis sativus]
Length = 362
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 246/301 (81%), Positives = 274/301 (91%)
Query: 41 KKSIRCFSTNTFLSTLTVANLAAIGNAKALTMENVLEGAASVYTMADGSLGDMFGGFLYS 100
+ S F F++ ++ + A+ AKA T++++ EGAASVYT+ADG +GD FGG LYS
Sbjct: 62 RNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILYS 121
Query: 101 AGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQI 160
AGQQAN AV QLSALSFTSLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFGSGKS+A++
Sbjct: 122 AGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEV 181
Query: 161 IGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP 220
+G+S+AFSLGLATTLALLG+GASFAGKAYGQIG GLPLAASGLA++MGLNLLEIIELQLP
Sbjct: 182 VGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLP 241
Query: 221 SFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLL 280
SFF+NFDPR+AAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDP+IGG+LL
Sbjct: 242 SFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIGGSLL 301
Query: 281 LSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFPTTMA 340
L+YTTGYV PLLLAASFAGALQSLLSFRKFSSWINP+SGALLLGGGLYTFLDRLFP TMA
Sbjct: 302 LTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVTMA 361
Query: 341 M 341
M
Sbjct: 362 M 362
>gi|122206055|sp|Q2QY07.1|CCDA2_ORYSJ RecName: Full=Cytochrome c-type biogenesis ccda-like chloroplastic
protein 2; AltName: Full=Cytochrome b6f biogenesis
protein CCDA2; Flags: Precursor
gi|77552967|gb|ABA95763.1| Cytochrome C biogenesis protein transmembrane region containing
protein, expressed [Oryza sativa Japonica Group]
Length = 362
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/325 (71%), Positives = 271/325 (83%), Gaps = 14/325 (4%)
Query: 30 GVSVHKSHSVAKKSIR------------CFSTNTFLSTLTVANLAAIGNAKALTMENVLE 77
GV + SV+K +IR L+T+ V +L A G A A + + L
Sbjct: 39 GVPRERGSSVSKAAIRGARLEAAARCSLVRQRPMLLATVAVGSLVAAGAANATEIGDSLL 98
Query: 78 GAASVYTMADGSLGDMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCT 137
G++ + +AD S+GD FG LYSAGQQANEAV QLSALSFTSLAVIFGAGLVTSLSPCT
Sbjct: 99 GSSGL-ALADLSIGDWFGNLLYSAGQQANEAVQDQLSALSFTSLAVIFGAGLVTSLSPCT 157
Query: 138 LSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLP 197
LSVLPLTLGYIGAFGSGK R++++G+S+AFSLGLATTLA+LGV ASFAGKAYGQ+G GLP
Sbjct: 158 LSVLPLTLGYIGAFGSGKDRSEVVGNSVAFSLGLATTLAILGVAASFAGKAYGQVGQGLP 217
Query: 198 LAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCST 257
+AASGLA++MGLNLLE+IELQLPSFF ++DPRAAAAN PSSVQAYLAGLTFALAASPCST
Sbjct: 218 VAASGLAVIMGLNLLEVIELQLPSFFSDYDPRAAAANLPSSVQAYLAGLTFALAASPCST 277
Query: 258 PVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPM 317
PVLATLLGYVATS+DP++GG+LLL+YTTGYVAPLL+AASFAGALQSLLSFR++S+WINP+
Sbjct: 278 PVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLIAASFAGALQSLLSFRRYSAWINPI 337
Query: 318 SGALLLGGGLYTFLDRLFP-TTMAM 341
SGA LLGGG+YT LDRLFP T+M M
Sbjct: 338 SGAFLLGGGVYTLLDRLFPATSMVM 362
>gi|122208139|sp|Q2RAR6.1|CCDA1_ORYSJ RecName: Full=Cytochrome c-type biogenesis ccda-like chloroplastic
protein 1; AltName: Full=Cytochrome b6f biogenesis
protein CCDA1; Flags: Precursor
gi|77548619|gb|ABA91416.1| Cytochrome C biogenesis protein transmembrane region containing
protein, expressed [Oryza sativa Japonica Group]
gi|215769034|dbj|BAH01263.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 367
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/325 (71%), Positives = 271/325 (83%), Gaps = 14/325 (4%)
Query: 30 GVSVHKSHSVAKKSIR------------CFSTNTFLSTLTVANLAAIGNAKALTMENVLE 77
GV + SV+K +IR L+T+ V +L A G A A + + L
Sbjct: 44 GVPRERGSSVSKAAIRGARLEAAARCSLVRQRPMLLATVAVGSLVAAGAANATEIGDSLL 103
Query: 78 GAASVYTMADGSLGDMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCT 137
G++ + +AD S+GD FG LYSAGQQANEAV QLSALSFTSLAVIFGAGLVTSLSPCT
Sbjct: 104 GSSGL-ALADLSVGDWFGNLLYSAGQQANEAVQDQLSALSFTSLAVIFGAGLVTSLSPCT 162
Query: 138 LSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLP 197
LSVLPLTLGYIGAFGSGK R++++G+S+AFSLGLATTLA+LGV ASFAGKAYGQ+G GLP
Sbjct: 163 LSVLPLTLGYIGAFGSGKDRSEVVGNSVAFSLGLATTLAILGVAASFAGKAYGQVGQGLP 222
Query: 198 LAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCST 257
+AASGLA++MGLNLLE+IELQLPSFF ++DPRAAAAN PSSVQAYLAGLTFALAASPCST
Sbjct: 223 VAASGLAVIMGLNLLEVIELQLPSFFSDYDPRAAAANLPSSVQAYLAGLTFALAASPCST 282
Query: 258 PVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPM 317
PVLATLLGYVATS+DP++GG+LLL+YTTGYVAPLL+AASFAGALQSLLSFR++S+WINP+
Sbjct: 283 PVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLIAASFAGALQSLLSFRRYSAWINPI 342
Query: 318 SGALLLGGGLYTFLDRLFP-TTMAM 341
SGA LLGGG+YT LDRLFP T+M M
Sbjct: 343 SGAFLLGGGVYTLLDRLFPATSMVM 367
>gi|218185213|gb|EEC67640.1| hypothetical protein OsI_35045 [Oryza sativa Indica Group]
gi|222615496|gb|EEE51628.1| hypothetical protein OsJ_32910 [Oryza sativa Japonica Group]
Length = 362
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/325 (71%), Positives = 271/325 (83%), Gaps = 14/325 (4%)
Query: 30 GVSVHKSHSVAKKSIR------------CFSTNTFLSTLTVANLAAIGNAKALTMENVLE 77
GV + SV+K +IR L+T+ V +L A G A A + + L
Sbjct: 39 GVPRERGSSVSKAAIRGARLEAAARCSLVRQRPMLLATVAVGSLVAAGAANATEIGDSLL 98
Query: 78 GAASVYTMADGSLGDMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCT 137
G++ + +AD S+GD FG LYSAGQQANEAV QLSALSFTSLAVIFGAGLVTSLSPCT
Sbjct: 99 GSSGL-ALADLSVGDWFGNLLYSAGQQANEAVQDQLSALSFTSLAVIFGAGLVTSLSPCT 157
Query: 138 LSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLP 197
LSVLPLTLGYIGAFGSGK R++++G+S+AFSLGLATTLA+LGV ASFAGKAYGQ+G GLP
Sbjct: 158 LSVLPLTLGYIGAFGSGKDRSEVVGNSVAFSLGLATTLAILGVAASFAGKAYGQVGQGLP 217
Query: 198 LAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCST 257
+AASGLA++MGLNLLE+IELQLPSFF ++DPRAAAAN PSSVQAYLAGLTFALAASPCST
Sbjct: 218 VAASGLAVIMGLNLLEVIELQLPSFFSDYDPRAAAANLPSSVQAYLAGLTFALAASPCST 277
Query: 258 PVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPM 317
PVLATLLGYVATS+DP++GG+LLL+YTTGYVAPLL+AASFAGALQSLLSFR++S+WINP+
Sbjct: 278 PVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLIAASFAGALQSLLSFRRYSAWINPI 337
Query: 318 SGALLLGGGLYTFLDRLFP-TTMAM 341
SGA LLGGG+YT LDRLFP T+M M
Sbjct: 338 SGAFLLGGGVYTLLDRLFPATSMVM 362
>gi|242069931|ref|XP_002450242.1| hypothetical protein SORBIDRAFT_05g002430 [Sorghum bicolor]
gi|241936085|gb|EES09230.1| hypothetical protein SORBIDRAFT_05g002430 [Sorghum bicolor]
Length = 353
Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/311 (73%), Positives = 269/311 (86%), Gaps = 5/311 (1%)
Query: 33 VHKSHSVAKKSIRCFSTNTFLSTLTVANLAAIGNAKALTMENVLE-GAASVYTMADGSLG 91
V+K + A++S C S L+++ V +L A G A A + + L +S +AD +G
Sbjct: 46 VNKQEATARRS--C-SRPMVLASVAVGSLVAAGAANATELWDPLALHGSSGLILADLGIG 102
Query: 92 DMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAF 151
D FGG L+SAGQQANEAV QLSALSF+SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAF
Sbjct: 103 DWFGGLLFSAGQQANEAVQDQLSALSFSSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAF 162
Query: 152 GSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNL 211
GSGK R++++G+SIAFSLGLATTLA+LGV ASFAGKAYGQ+G GLP+AASGLAI+MGLNL
Sbjct: 163 GSGKGRSEVVGNSIAFSLGLATTLAILGVAASFAGKAYGQVGQGLPVAASGLAIIMGLNL 222
Query: 212 LEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSK 271
LE++ELQLPSFF +FDPRAAAAN PS VQAYLAGLTFALAASPCSTPVLATLLGYVATS+
Sbjct: 223 LEVLELQLPSFFSDFDPRAAAANLPSGVQAYLAGLTFALAASPCSTPVLATLLGYVATSR 282
Query: 272 DPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFL 331
DP+IGG+LLL+YTTGYVAPLL+AASFAGALQSLLSFR++S+WINP+SGA LLGGG+YT L
Sbjct: 283 DPIIGGSLLLTYTTGYVAPLLVAASFAGALQSLLSFRRYSAWINPISGAFLLGGGVYTLL 342
Query: 332 DRLFP-TTMAM 341
DR+FP T+MAM
Sbjct: 343 DRVFPATSMAM 353
>gi|414588660|tpg|DAA39231.1| TPA: hypothetical protein ZEAMMB73_102687 [Zea mays]
Length = 330
Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/312 (73%), Positives = 267/312 (85%), Gaps = 6/312 (1%)
Query: 33 VHKSHSVAKKSIRCFSTNTFLSTLTVANLAAIGNAKALTMEN--VLEGAASVYTMADGSL 90
V K + A + R S L+++ V +L A G A A + + L G++ + +AD +
Sbjct: 22 VAKPEAAATPARR--SRPIPLASVAVWSLVATGAANAAELWDPLALHGSSGL-VLADLGI 78
Query: 91 GDMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGA 150
GD FGG L+SAGQQANEAV QLSALSF+SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGA
Sbjct: 79 GDWFGGLLFSAGQQANEAVQDQLSALSFSSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGA 138
Query: 151 FGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLN 210
FGSGK R++++G+SIAFSLGLATTLA+LGV ASFAGKAYGQ+G GLP+AASGLAI+MGLN
Sbjct: 139 FGSGKGRSEVVGNSIAFSLGLATTLAILGVAASFAGKAYGQVGQGLPVAASGLAIIMGLN 198
Query: 211 LLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATS 270
LLE++ELQLPSFF +FDPRAAAAN PS VQAYLAGLTFALAASPCSTPVLATLLGYVATS
Sbjct: 199 LLEVLELQLPSFFSDFDPRAAAANLPSGVQAYLAGLTFALAASPCSTPVLATLLGYVATS 258
Query: 271 KDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTF 330
+DP+IGG+LLL+YTTGYVAPLL+AASFAGALQSLLSFR++S+WINP+SGA LLGGG+YT
Sbjct: 259 RDPIIGGSLLLTYTTGYVAPLLIAASFAGALQSLLSFRRYSAWINPISGAFLLGGGVYTL 318
Query: 331 LDRLFP-TTMAM 341
LDR+FP T+M M
Sbjct: 319 LDRVFPATSMVM 330
>gi|357161033|ref|XP_003578956.1| PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic
protein 2-like [Brachypodium distachyon]
Length = 348
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/312 (72%), Positives = 265/312 (84%), Gaps = 4/312 (1%)
Query: 33 VHKSHSVAKKSIRCF--STNTFLSTLTVANLAAIGNAKALTMENVLEGAASVYTMADGSL 90
+H SV ++ + + LS++ V +L A A A + + L G + +AD S+
Sbjct: 38 IHGPGSVTEEKLSFLLRPRSVLLSSVAVGSLVAASAANAADLGDSLIGPPGLL-LADLSI 96
Query: 91 GDMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGA 150
GD FGG L+SAGQQANEAVL QLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGA
Sbjct: 97 GDWFGGLLFSAGQQANEAVLDQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGA 156
Query: 151 FGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLN 210
FG+GK R +++G+S+AFSLGLATTLA+LGV ASFAGKAYGQ+G GLP+AASGL I+MGLN
Sbjct: 157 FGAGKDRTEVVGNSVAFSLGLATTLAILGVAASFAGKAYGQVGQGLPVAASGLGIIMGLN 216
Query: 211 LLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATS 270
LLE++ELQLPSFF +FDPRAAAAN P SVQAYLAGLTFALAASPCSTPVLATLLGYVATS
Sbjct: 217 LLEVVELQLPSFFSDFDPRAAAANLPPSVQAYLAGLTFALAASPCSTPVLATLLGYVATS 276
Query: 271 KDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTF 330
+DP++GG+LLL+YTTGYVAPLL+AASFAGALQSLLSFR++S+WINP+SGA LLGGG+YT
Sbjct: 277 RDPIVGGSLLLTYTTGYVAPLLIAASFAGALQSLLSFRRYSTWINPISGAFLLGGGVYTL 336
Query: 331 LDRLFP-TTMAM 341
LD+LFP T+M M
Sbjct: 337 LDKLFPVTSMVM 348
>gi|27464261|gb|AAO16019.1| biogenesis protein [Hordeum vulgare subsp. vulgare]
gi|326512184|dbj|BAJ96073.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/257 (83%), Positives = 242/257 (94%), Gaps = 1/257 (0%)
Query: 86 ADGSLGDMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTL 145
AD +GD FGG L+SAGQQANEAVL QLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTL
Sbjct: 88 ADLGIGDWFGGLLFSAGQQANEAVLDQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTL 147
Query: 146 GYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAI 205
GYIGAFGSGK RA+++G+S+AFSLGLATTLA+LGV ASFAGKAYGQ+G GLP+AASGL I
Sbjct: 148 GYIGAFGSGKDRAEVVGNSVAFSLGLATTLAILGVAASFAGKAYGQVGQGLPVAASGLGI 207
Query: 206 VMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLG 265
VMGLNLLE++ELQLPSFF ++DPR+AAAN PSSVQAYLAGLTFALAASPCSTPVLATLLG
Sbjct: 208 VMGLNLLEVVELQLPSFFSDYDPRSAAANLPSSVQAYLAGLTFALAASPCSTPVLATLLG 267
Query: 266 YVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGG 325
YVATS+DP++GG+LLL+YTTGYVAPLL+AASFAGALQSLLSFR++S+WINP+SGA LLGG
Sbjct: 268 YVATSRDPIVGGSLLLTYTTGYVAPLLIAASFAGALQSLLSFRRYSTWINPISGAFLLGG 327
Query: 326 GLYTFLDRLFP-TTMAM 341
G+YT LD+LFP T+M M
Sbjct: 328 GVYTLLDKLFPATSMVM 344
>gi|27464263|gb|AAO16020.1| biogenesis protein [Medicago truncatula]
Length = 338
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 243/331 (73%), Positives = 273/331 (82%), Gaps = 13/331 (3%)
Query: 15 SCHQRSTAYGKQMAPGVSVHKSHS---VAKKSIRCFSTNTFLSTLTVANLAAIGNAKALT 71
SC ++ +GK++ V H +K I S TF+ LT A L A AKA
Sbjct: 17 SCRTINS-HGKRIIATKKVKTEHENCLRSKSKINGNSIMTFIGGLTAAQLVAPVTAKA-- 73
Query: 72 MENVLEGAASVYTMADGSLGDMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVT 131
E A V+T+ADG +GD FGG L+SAGQQANEAVL QLS+LSFTSLAVI+GAGLVT
Sbjct: 74 -----EIVAPVFTLADGGIGDWFGGILFSAGQQANEAVLDQLSSLSFTSLAVIYGAGLVT 128
Query: 132 SLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQ 191
SLSPCTLSVLPLTLGYIGAFGSGKSRAQ+IGDSIAFSLGLATTLALLGVGASFAGKAYGQ
Sbjct: 129 SLSPCTLSVLPLTLGYIGAFGSGKSRAQVIGDSIAFSLGLATTLALLGVGASFAGKAYGQ 188
Query: 192 IGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALA 251
IG GLP+AASGLA++MGLNLLEIIELQLPSFFD+FDP++ AANFPSSVQAYLAGLTFALA
Sbjct: 189 IGQGLPVAASGLAVIMGLNLLEIIELQLPSFFDSFDPKSLAANFPSSVQAYLAGLTFALA 248
Query: 252 ASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFS 311
ASPCSTPVLATLLGYVA SK+P+IGG+LLL+YTTGY+ P FAGALQSLLSFRK+S
Sbjct: 249 ASPCSTPVLATLLGYVAASKNPVIGGSLLLTYTTGYIFPYFWLF-FAGALQSLLSFRKYS 307
Query: 312 SWINPMSGALLLGGGLYTFLDRLFP-TTMAM 341
+WINP+SGA+LLGGG+YTFLDRLFP TMAM
Sbjct: 308 AWINPISGAMLLGGGVYTFLDRLFPAATMAM 338
>gi|297792879|ref|XP_002864324.1| cytochrome c biogenesis protein family [Arabidopsis lyrata subsp.
lyrata]
gi|297310159|gb|EFH40583.1| cytochrome c biogenesis protein family [Arabidopsis lyrata subsp.
lyrata]
Length = 350
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 254/345 (73%), Positives = 286/345 (82%), Gaps = 14/345 (4%)
Query: 2 SLLINQSVHFSRI--SCH-QRSTAYGKQMAPGVSVHKSHSVAKKSIRCFSTNTFLSTLTV 58
S +NQ + R +C QR T+ ++ VS+H+ S KS++ S L V
Sbjct: 15 SCRLNQEKKWVRAAKNCELQRETSL---VSDAVSLHRKES---KSMKL---AMLASGLGV 65
Query: 59 ANLAAIGNAKALTMEN-VLEGAASVYTMADGSLGDMFGGFLYSAGQQANEAVLGQLSALS 117
ANL +AKA ++ VL+ A S+Y +A+GSLGD G FLYSA QQANEAV QLSALS
Sbjct: 66 ANLVTFSSAKAADLKMIVLDQATSIYILAEGSLGDSVGNFLYSANQQANEAVQDQLSALS 125
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLAL 177
TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR Q+IGD++AF+LGLATTLAL
Sbjct: 126 VTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRGQVIGDTVAFALGLATTLAL 185
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
LG+ ASFAGKAYGQIG GLP+AASGLAIVMGLNLLEIIELQLPSFF+NFDPRAAAANFPS
Sbjct: 186 LGIVASFAGKAYGQIGQGLPVAASGLAIVMGLNLLEIIELQLPSFFNNFDPRAAAANFPS 245
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
SVQAYLAGLTFALAASPCSTPVLATLLGYVATS+DP+IGG+LLL+YTTGYVAPL++AASF
Sbjct: 246 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPVIGGSLLLTYTTGYVAPLIVAASF 305
Query: 298 AGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFP-TTMAM 341
AGALQSLLS RK S+WINP+SGALLLGGGLYTFLDRLFP TM M
Sbjct: 306 AGALQSLLSLRKVSAWINPISGALLLGGGLYTFLDRLFPAATMVM 350
>gi|346703748|emb|CBX24416.1| hypothetical_protein [Oryza glaberrima]
Length = 353
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/325 (69%), Positives = 263/325 (80%), Gaps = 23/325 (7%)
Query: 30 GVSVHKSHSVAKKSIR------------CFSTNTFLSTLTVANLAAIGNAKALTMENVLE 77
GV + SV+K +IR L+T+ V +L A G A A + + L
Sbjct: 39 GVPRERGSSVSKAAIRGARLEAAARCSLVRQRPMLLATVAVGSLVAAGAANATEIGDSLL 98
Query: 78 GAASVYTMADGSLGDMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCT 137
G++ + +AD S+GD FG LYSAGQQANEAV QLSALSFTSLAVIFGAGLVTSLSPCT
Sbjct: 99 GSSGL-ALADLSIGDWFGNLLYSAGQQANEAVQDQLSALSFTSLAVIFGAGLVTSLSPCT 157
Query: 138 LSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLP 197
LSVLPLTLGYIG +++G+S+AFSLGLATTLA+LGV ASFAGKAYGQ+G GLP
Sbjct: 158 LSVLPLTLGYIG---------KVVGNSVAFSLGLATTLAILGVAASFAGKAYGQVGQGLP 208
Query: 198 LAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCST 257
+AASGLA++MGLNLLE+IELQLPSFF ++DPRAAAAN PSSVQAYLAGLTFALAASPCST
Sbjct: 209 VAASGLAVIMGLNLLEVIELQLPSFFSDYDPRAAAANLPSSVQAYLAGLTFALAASPCST 268
Query: 258 PVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPM 317
PVLATLLGYVATS+DP++GG+LLL+YTTGYVAPLL+AASFAGALQSLLSFR++S+WINP+
Sbjct: 269 PVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLIAASFAGALQSLLSFRRYSAWINPI 328
Query: 318 SGALLLGGGLYTFLDRLFP-TTMAM 341
SGA LLGGG+YT LDRLFP T+M M
Sbjct: 329 SGAFLLGGGVYTLLDRLFPATSMVM 353
>gi|15239604|ref|NP_200240.1| cytochrome c-type biogenesis ccda-like chloroplastic protein
[Arabidopsis thaliana]
gi|75185104|sp|Q9M5P3.1|CCDA_ARATH RecName: Full=Cytochrome c-type biogenesis ccda-like chloroplastic
protein; AltName: Full=Cytochrome b6f biogenesis protein
CCDA
gi|7021486|gb|AAF35369.1| putative cytochrome c biogenesis protein precursor [Arabidopsis
thaliana]
gi|9759502|dbj|BAB10752.1| cytochrome c biogenesis protein precursor [Arabidopsis thaliana]
gi|23297361|gb|AAN12950.1| cytochrome c biogenesis protein precursor [Arabidopsis thaliana]
gi|332009097|gb|AED96480.1| cytochrome c-type biogenesis ccda-like chloroplastic protein
[Arabidopsis thaliana]
Length = 354
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 250/342 (73%), Positives = 280/342 (81%), Gaps = 8/342 (2%)
Query: 2 SLLINQSVHFSRISCHQRSTAYGKQMAPGVSVHKSHSVAKKSIRCFSTNTFLSTLTVANL 61
S +N + R H ++ VS+ + S KSI+ S L VANL
Sbjct: 19 SCRLNHEKRWVRAGKHCELERERSLVSDAVSLERLES---KSIKL---AMLASGLGVANL 72
Query: 62 AAIGNAKALTMEN-VLEGAASVYTMADGSLGDMFGGFLYSAGQQANEAVLGQLSALSFTS 120
+ +AKA ++ VL+ A S+Y +A+GSLGD G FLYSA QQANEAV QLSALS TS
Sbjct: 73 VTLSSAKAADLKMIVLDQATSIYILAEGSLGDSVGNFLYSANQQANEAVQDQLSALSVTS 132
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGV 180
LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR Q+IGD++AF+LGLATTLALLG+
Sbjct: 133 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRGQVIGDTVAFALGLATTLALLGI 192
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
ASFAGKAYGQIG GLP+AASGLAIVMGLNLLEIIELQLPSFF+NFDPRAAAANFPSSVQ
Sbjct: 193 VASFAGKAYGQIGQGLPVAASGLAIVMGLNLLEIIELQLPSFFNNFDPRAAAANFPSSVQ 252
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGA 300
AYLAGLTFALAASPCSTPVLATLLGYVATS+DP+IGG+LLL+YTTGYVAPL++AASFAGA
Sbjct: 253 AYLAGLTFALAASPCSTPVLATLLGYVATSRDPVIGGSLLLTYTTGYVAPLIVAASFAGA 312
Query: 301 LQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFP-TTMAM 341
LQSLLS RK S+WINP+SGALLLGGGLYTFLDRLFP TM M
Sbjct: 313 LQSLLSLRKVSAWINPISGALLLGGGLYTFLDRLFPAATMVM 354
>gi|37624244|gb|AAQ95739.1| c-type cytochrome biogenesis protein [Descurainia sophia]
Length = 353
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 250/353 (70%), Positives = 284/353 (80%), Gaps = 12/353 (3%)
Query: 1 MSLLINQSVH------FSRISCHQ----RSTAYGKQMAPGVSVHKSHSVAKKSIRCFSTN 50
M+L +N+ + FS H+ R+ + + S S+ KK
Sbjct: 1 MNLTVNRCITGGFVGGFSSCRIHRGGEVRAAKHCEVQRETSLRSDSVSLLKKESTSIKLT 60
Query: 51 TFLSTLTVANLAAIGNAKALTMEN-VLEGAASVYTMADGSLGDMFGGFLYSAGQQANEAV 109
S L VANL + +AKA ++ VL+ A SVY++A+GSLGD G FLYSA QQANEAV
Sbjct: 61 MLASGLGVANLITLSSAKAADLKMIVLDQAISVYSLAEGSLGDSVGNFLYSANQQANEAV 120
Query: 110 LGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSL 169
QLSALS TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ +GD++AF+L
Sbjct: 121 QDQLSALSLTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQAVGDTVAFAL 180
Query: 170 GLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR 229
GLATTLALLG+ ASFAGKAYGQIG GLP+AASGLA+VMGLNLLEIIELQLPSFF+NFDPR
Sbjct: 181 GLATTLALLGIVASFAGKAYGQIGQGLPVAASGLAVVMGLNLLEIIELQLPSFFNNFDPR 240
Query: 230 AAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVA 289
AAAANFPSS+QAYLAGLTFALAASPCSTPVLATLLGYVATS+DP+IGG+LLL+YTTGYVA
Sbjct: 241 AAAANFPSSIQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPIIGGSLLLTYTTGYVA 300
Query: 290 PLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFP-TTMAM 341
PL++AASFAGALQSLLS RK S+WINP+SGALLLGGGLYTFLDRLFP TM M
Sbjct: 301 PLIVAASFAGALQSLLSLRKVSAWINPISGALLLGGGLYTFLDRLFPAATMVM 353
>gi|15292991|gb|AAK93606.1| putative cytochrome c biogenesis protein precursor [Arabidopsis
thaliana]
Length = 354
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 249/342 (72%), Positives = 279/342 (81%), Gaps = 8/342 (2%)
Query: 2 SLLINQSVHFSRISCHQRSTAYGKQMAPGVSVHKSHSVAKKSIRCFSTNTFLSTLTVANL 61
S +N + R H ++ VS+ + S KSI+ S L VANL
Sbjct: 19 SCRLNHEKRWVRAGKHCELERERSLVSDAVSLERLES---KSIKL---AMLASGLGVANL 72
Query: 62 AAIGNAKALTMEN-VLEGAASVYTMADGSLGDMFGGFLYSAGQQANEAVLGQLSALSFTS 120
+ +AKA ++ VL+ A S+Y +A+GSLGD G FLYSA QQAN AV QLSALS TS
Sbjct: 73 VTLSSAKAADLKMIVLDQATSIYILAEGSLGDSVGNFLYSANQQANAAVQDQLSALSVTS 132
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGV 180
LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR Q+IGD++AF+LGLATTLALLG+
Sbjct: 133 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRGQVIGDTVAFALGLATTLALLGI 192
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
ASFAGKAYGQIG GLP+AASGLAIVMGLNLLEIIELQLPSFF+NFDPRAAAANFPSSVQ
Sbjct: 193 VASFAGKAYGQIGQGLPVAASGLAIVMGLNLLEIIELQLPSFFNNFDPRAAAANFPSSVQ 252
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGA 300
AYLAGLTFALAASPCSTPVLATLLGYVATS+DP+IGG+LLL+YTTGYVAPL++AASFAGA
Sbjct: 253 AYLAGLTFALAASPCSTPVLATLLGYVATSRDPVIGGSLLLTYTTGYVAPLIVAASFAGA 312
Query: 301 LQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFP-TTMAM 341
LQSLLS RK S+WINP+SGALLLGGGLYTFLDRLFP TM M
Sbjct: 313 LQSLLSLRKVSAWINPISGALLLGGGLYTFLDRLFPAATMVM 354
>gi|334188385|ref|NP_001190537.1| cytochrome c-type biogenesis ccda-like chloroplastic protein
[Arabidopsis thaliana]
gi|332009098|gb|AED96481.1| cytochrome c-type biogenesis ccda-like chloroplastic protein
[Arabidopsis thaliana]
Length = 355
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 240/290 (82%), Positives = 263/290 (90%), Gaps = 2/290 (0%)
Query: 54 STLTVANLAAIGNAKALTMEN-VLEGAASVYTMADGSLGDMFGGFLYSAGQQANEAVLGQ 112
S L VANL + +AKA ++ VL+ A S+Y +A+GSLGD G FLYSA QQANEAV Q
Sbjct: 66 SGLGVANLVTLSSAKAADLKMIVLDQATSIYILAEGSLGDSVGNFLYSANQQANEAVQDQ 125
Query: 113 LSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLA 172
LSALS TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR Q+IGD++AF+LGLA
Sbjct: 126 LSALSVTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRGQVIGDTVAFALGLA 185
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
TTLALLG+ ASFAGKAYGQIG GLP+AASGLAIVMGLNLLEIIELQLPSFF+NFDPRAAA
Sbjct: 186 TTLALLGIVASFAGKAYGQIGQGLPVAASGLAIVMGLNLLEIIELQLPSFFNNFDPRAAA 245
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATS+DP+IGG+LLL+YTTGYVAPL+
Sbjct: 246 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPVIGGSLLLTYTTGYVAPLI 305
Query: 293 LAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFP-TTMAM 341
+AASFAGALQSLLS RK S+WINP+SGALLLGGGLYTFLDRLFP TM M
Sbjct: 306 VAASFAGALQSLLSLRKVSAWINPISGALLLGGGLYTFLDRLFPAATMVM 355
>gi|21592806|gb|AAM64755.1| cytochrome c biogenesis protein precursor [Arabidopsis thaliana]
Length = 354
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 249/340 (73%), Positives = 280/340 (82%), Gaps = 17/340 (5%)
Query: 13 RISCHQRSTAYGKQ---------MAPGVSVHKSHSVAKKSIRCFSTNTFLSTLTVANLAA 63
R++ +R GK ++ VS+ + S KSI+ S L VANL
Sbjct: 21 RLTHEKRWVRAGKHCELERERSLVSDAVSLERLES---KSIKL---AMLASGLGVANLVT 74
Query: 64 IGNAKALTMEN-VLEGAASVYTMADGSLGDMFGGFLYSAGQQANEAVLGQLSALSFTSLA 122
+ +AKA ++ VL+ A S+Y +A+GSLGD G F YSA QQANEAV QLSALS TSLA
Sbjct: 75 LSSAKAADLKMIVLDQATSIYILAEGSLGDSVGNFFYSANQQANEAVQDQLSALSVTSLA 134
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGA 182
VIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR Q+IGD++AF+LGLATTLALLG+ A
Sbjct: 135 VIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRGQVIGDTVAFALGLATTLALLGIVA 194
Query: 183 SFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAY 242
SFAGKAYGQIG GLP+AASGLAIVMGLNLLEIIELQLPSFF+NFDPRAAAANFPSSVQAY
Sbjct: 195 SFAGKAYGQIGQGLPVAASGLAIVMGLNLLEIIELQLPSFFNNFDPRAAAANFPSSVQAY 254
Query: 243 LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQ 302
LAGLTFALAASPCSTPVLATLLGYVATS+DP+IGG+LLL+YTTGYVAPL++AASFAGALQ
Sbjct: 255 LAGLTFALAASPCSTPVLATLLGYVATSRDPVIGGSLLLTYTTGYVAPLIVAASFAGALQ 314
Query: 303 SLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFP-TTMAM 341
SLLS RK S+WINP+SGALLLGGGLYTFLDRLFP TM M
Sbjct: 315 SLLSLRKVSAWINPISGALLLGGGLYTFLDRLFPAATMVM 354
>gi|222616608|gb|EEE52740.1| hypothetical protein OsJ_35161 [Oryza sativa Japonica Group]
Length = 340
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/300 (71%), Positives = 251/300 (83%), Gaps = 13/300 (4%)
Query: 30 GVSVHKSHSVAKKSIR---------C---FSTNTFLSTLTVANLAAIGNAKALTMENVLE 77
GV + SV+K +IR C L+T+ V +L A G A A + + L
Sbjct: 39 GVPRERGSSVSKAAIRGARLEAAARCSLVRQRPMLLATVAVGSLVAAGAANATEIGDSLL 98
Query: 78 GAASVYTMADGSLGDMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCT 137
G++ + +AD S+GD FG LYSAGQQANEAV QLSALSFTSLAVIFGAGLVTSLSPCT
Sbjct: 99 GSSGL-ALADLSIGDWFGNLLYSAGQQANEAVQDQLSALSFTSLAVIFGAGLVTSLSPCT 157
Query: 138 LSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLP 197
LSVLPLTLGYIGAFGSGK R++++G+S+AFSLGLATTLA+LGV ASFAGKAYGQ+G GLP
Sbjct: 158 LSVLPLTLGYIGAFGSGKDRSEVVGNSVAFSLGLATTLAILGVAASFAGKAYGQVGQGLP 217
Query: 198 LAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCST 257
+AASGLA++MGLNLLE+IELQLPSFF ++DPRAAAAN PSSVQAYLAGLTFALAASPCST
Sbjct: 218 VAASGLAVIMGLNLLEVIELQLPSFFSDYDPRAAAANLPSSVQAYLAGLTFALAASPCST 277
Query: 258 PVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPM 317
PVLATLLGYVATS+DP++GG+LLL+YTTGYVAPLL+AASFAGALQSLLSFR++S+WINP+
Sbjct: 278 PVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLIAASFAGALQSLLSFRRYSAWINPI 337
>gi|326502542|dbj|BAJ95334.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/232 (84%), Positives = 221/232 (95%)
Query: 86 ADGSLGDMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTL 145
AD +GD FGG L+SAGQQANEAVL QLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTL
Sbjct: 88 ADLGIGDWFGGLLFSAGQQANEAVLDQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTL 147
Query: 146 GYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAI 205
GYIGAFGSGK RA+++G+S+AFSLGLATTLA+LGV ASFAGKAYGQ+G GLP+AASGL I
Sbjct: 148 GYIGAFGSGKDRAEVVGNSVAFSLGLATTLAILGVAASFAGKAYGQVGQGLPVAASGLGI 207
Query: 206 VMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLG 265
VMGLNLLE++ELQLPSFF ++DPR+AAAN PSSVQAYLAGLTFALAASPCSTPVLATLLG
Sbjct: 208 VMGLNLLEVVELQLPSFFSDYDPRSAAANLPSSVQAYLAGLTFALAASPCSTPVLATLLG 267
Query: 266 YVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPM 317
YVATS+DP++GG+LLL+YTTGYVAPLL+AASFAGALQSLLSFR++S+WINP+
Sbjct: 268 YVATSRDPIVGGSLLLTYTTGYVAPLLIAASFAGALQSLLSFRRYSTWINPI 319
>gi|302770172|ref|XP_002968505.1| hypothetical protein SELMODRAFT_270705 [Selaginella moellendorffii]
gi|300164149|gb|EFJ30759.1| hypothetical protein SELMODRAFT_270705 [Selaginella moellendorffii]
Length = 319
Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 203/275 (73%), Positives = 228/275 (82%), Gaps = 5/275 (1%)
Query: 62 AAIGNAKALTMENVLEGAASVYTMADGSLGDMFGGFLYSAGQQANEAVLGQLSALSFTSL 121
AA+G + + + L AS + S GD G L++AGQ AN AV G+LSALS S+
Sbjct: 40 AAVGCSDLIQLAPALVADASSW-----SAGDWLSGLLFNAGQDANSAVQGELSALSLASV 94
Query: 122 AVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVG 181
A IFGAGLVTSLSPCTLSVLPLTLGYIG+ GSGKS+AQI D+ AFS+GLATTLA+LG+
Sbjct: 95 ATIFGAGLVTSLSPCTLSVLPLTLGYIGSSGSGKSQAQIAVDAFAFSMGLATTLAVLGIV 154
Query: 182 ASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQA 241
AS AGKAYGQIG GLP+ S LA++MGLNLLEIIELQLPSFF NFDPR+AAAN P+SVQA
Sbjct: 155 ASLAGKAYGQIGQGLPIGVSCLAMLMGLNLLEIIELQLPSFFGNFDPRSAAANLPTSVQA 214
Query: 242 YLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGAL 301
YLAGLTFALAASPCSTPVLATLLGYVA S+DP+ GG LLL YT+GYVAPLLLAASFAGAL
Sbjct: 215 YLAGLTFALAASPCSTPVLATLLGYVAASQDPVTGGALLLVYTSGYVAPLLLAASFAGAL 274
Query: 302 QSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFP 336
Q LL+ RKFS+WINP SGALLLGGGLYTFLDR FP
Sbjct: 275 QQLLALRKFSAWINPTSGALLLGGGLYTFLDRTFP 309
>gi|302788422|ref|XP_002975980.1| hypothetical protein SELMODRAFT_151070 [Selaginella moellendorffii]
gi|300156256|gb|EFJ22885.1| hypothetical protein SELMODRAFT_151070 [Selaginella moellendorffii]
Length = 319
Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 201/275 (73%), Positives = 228/275 (82%), Gaps = 5/275 (1%)
Query: 62 AAIGNAKALTMENVLEGAASVYTMADGSLGDMFGGFLYSAGQQANEAVLGQLSALSFTSL 121
AA+G + + + L AS + S GD G L++AGQ AN AV G+LSALS S+
Sbjct: 40 AAVGCSDLIQLAPALVADASSW-----SAGDWLSGLLFNAGQDANSAVQGELSALSLASV 94
Query: 122 AVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVG 181
A IFGAGLVTSLSPCTLSVLPLTLGYIG+ GSGKS+AQI D+ AFS+GLATTLA+LG+
Sbjct: 95 ATIFGAGLVTSLSPCTLSVLPLTLGYIGSSGSGKSQAQIAVDAFAFSMGLATTLAVLGIV 154
Query: 182 ASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQA 241
AS AGKAYGQIG GLP+ S LA++MGLNLLEIIELQLPSFF NFDPR+AAAN P+SVQA
Sbjct: 155 ASLAGKAYGQIGQGLPIGVSCLAMLMGLNLLEIIELQLPSFFGNFDPRSAAANLPTSVQA 214
Query: 242 YLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGAL 301
YLAGLTFALAASPCSTPVLATLLGYVA S+DP+ GG LLL YT+GYV+PLLLAASFAGAL
Sbjct: 215 YLAGLTFALAASPCSTPVLATLLGYVAASQDPVTGGALLLVYTSGYVSPLLLAASFAGAL 274
Query: 302 QSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFP 336
Q LL+ RKFS+WINP SGALLLGGGLYTFLD+ FP
Sbjct: 275 QQLLALRKFSAWINPTSGALLLGGGLYTFLDKTFP 309
>gi|346703267|emb|CBX25365.1| hypothetical_protein [Oryza brachyantha]
Length = 365
Score = 350 bits (898), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 195/297 (65%), Positives = 228/297 (76%), Gaps = 28/297 (9%)
Query: 30 GVSVHKSHSVAKKSIR---------C---FSTNTFLSTLTVANLAAIGNAKALTMENVLE 77
GV + SV+K ++R C L+T+ V +L A G A A + + L
Sbjct: 47 GVPCERGSSVSKAAVRGARLEAAARCSLLRQPPVLLATVAVGSLVAAGAANATELGDSLL 106
Query: 78 GAASVYTMADGSLGDMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCT 137
G+ S + +AD S+GD FG LYSAGQQANEAV QLSALSFTSLAVIF AGLVTSLSPCT
Sbjct: 107 GS-SGFALADISIGDWFGNLLYSAGQQANEAVQDQLSALSFTSLAVIFSAGLVTSLSPCT 165
Query: 138 LSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLP 197
LSVLPLTLGYIG + + ++G+S+AFSLGLATTLA+LGV ASFAGKAYGQ+G GLP
Sbjct: 166 LSVLPLTLGYIGKYSGYR---DVVGNSVAFSLGLATTLAILGVAASFAGKAYGQVGQGLP 222
Query: 198 LAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCST 257
+AASGLA++MGLNLLE+IELQLPSFF ++DPRAAAAN PSSVQAYLAGLTFALAASPCST
Sbjct: 223 VAASGLAVIMGLNLLEVIELQLPSFFSDYDPRAAAANLPSSVQAYLAGLTFALAASPCST 282
Query: 258 PVLATLLGYVATSK------------DPLIGGTLLLSYTTGYVAPLLLAASFAGALQ 302
PVLATLLGYVATS+ DP++GG+LLL+YTTGYVAPLL+AASFAGALQ
Sbjct: 283 PVLATLLGYVATSRVCIIGGCPFFSQDPIVGGSLLLTYTTGYVAPLLIAASFAGALQ 339
>gi|168053106|ref|XP_001778979.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669651|gb|EDQ56234.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 274
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 187/255 (73%), Positives = 215/255 (84%), Gaps = 1/255 (0%)
Query: 85 MADGSLGDMFGGFLYSAGQQANEAVLGQLS-ALSFTSLAVIFGAGLVTSLSPCTLSVLPL 143
+A+G D L++AGQ AN V GQL +L+ TS+A+IFGAGLVTSLSPCTLSVLPL
Sbjct: 14 VAEGGTSDWLNNTLFTAGQNANSVVQGQLQGSLTPTSVAIIFGAGLVTSLSPCTLSVLPL 73
Query: 144 TLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGL 203
TLGYIGA G GK+R Q+ DS+AFS GLATTLA+LGVGAS AGKAYGQIG G+P+A S +
Sbjct: 74 TLGYIGASGGGKNRTQLFVDSVAFSFGLATTLAVLGVGASLAGKAYGQIGQGIPIAVSVV 133
Query: 204 AIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATL 263
A+VMGLNLLEIIELQ PSFF NFD R AAA P S QAYLAGLTFALAASPCSTPVLA+L
Sbjct: 134 AMVMGLNLLEIIELQFPSFFGNFDARKAAATLPPSAQAYLAGLTFALAASPCSTPVLASL 193
Query: 264 LGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLL 323
L YVA+S+DPL+GG+LLL+YTTGYVAPLLLAASFAGALQ L++ RK+S+WINP SGALLL
Sbjct: 194 LAYVASSQDPLVGGSLLLAYTTGYVAPLLLAASFAGALQQLMAMRKYSAWINPTSGALLL 253
Query: 324 GGGLYTFLDRLFPTT 338
GGGLY+FL R FP +
Sbjct: 254 GGGLYSFLTRTFPES 268
>gi|346703359|emb|CBX25456.1| hypothetical_protein [Oryza glaberrima]
Length = 355
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 224/324 (69%), Gaps = 64/324 (19%)
Query: 30 GVSVHKSHSVAKKSIR---------C---FSTNTFLSTLTVANLAAIGNAKALTMENVLE 77
GV + SV+K +IR C L+T+ V +L A G A A + + L
Sbjct: 44 GVPRERGSSVSKAAIRGARLEAAARCSLVRQRPMLLATVAVGSLVAAGAANATEIGDSL- 102
Query: 78 GAASVYTMADGSLGDMFGGFLYSAGQQANEAVLGQLSALSFT------------------ 119
+S +AD S+GD FG LYSAGQQANEAV QLSALSFT
Sbjct: 103 -GSSGLALADLSVGDWFGNLLYSAGQQANEAVQDQLSALSFTRLAFRPLQSIAYRQNLFT 161
Query: 120 --------------------SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ 159
SLAVIFGAGLVTSLSPCTLSVLPLTLGYI
Sbjct: 162 YFLSLYFMFLSISFLTCFSISLAVIFGAGLVTSLSPCTLSVLPLTLGYI----------- 210
Query: 160 IIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQL 219
++G+S+AFSLGLATTLA+LGV ASFAGKAYGQ+G GLP+AASGLA++MGLNLLE+IELQL
Sbjct: 211 VVGNSVAFSLGLATTLAILGVAASFAGKAYGQVGQGLPVAASGLAVIMGLNLLEVIELQL 270
Query: 220 PSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSK-DPLIGGT 278
PSFF ++DPRAAAAN PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATS+ DP++GG+
Sbjct: 271 PSFFSDYDPRAAAANLPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRQDPIVGGS 330
Query: 279 LLLSYTTGYVAPLLLAASFAGALQ 302
LLL+YTTGYVAPLL+AASFAGALQ
Sbjct: 331 LLLTYTTGYVAPLLIAASFAGALQ 354
>gi|159491447|ref|XP_001703678.1| c-type cytochrome biogenesis protein [Chlamydomonas reinhardtii]
gi|158270586|gb|EDO96427.1| c-type cytochrome biogenesis protein [Chlamydomonas reinhardtii]
Length = 308
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 148/279 (53%), Positives = 202/279 (72%), Gaps = 9/279 (3%)
Query: 64 IGNAKALTMENVLEGAASVYTMADGSLGDMFGGFLYSAGQQANEAVLGQLSALSFTSLAV 123
+ ++K+L + +Y ++D + D+ G L++AGQ A+ V QL+ ++ +
Sbjct: 34 VASSKSLKRQLRAVSGQELYELSDQA-QDLVQG-LFAAGQSADALVSQQLTGVTPLTYLA 91
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAF-----GSGKSRAQIIGDSIAFSLGLATTLALL 178
+ GAGLVTSLSPCTLSVLPLT+GYIG + G+G S+ + +++FS GLATTLA+L
Sbjct: 92 VLGAGLVTSLSPCTLSVLPLTIGYIGGYSQDDNGNGASKPNLGLQAVSFSFGLATTLAVL 151
Query: 179 GVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSS 238
GV +SF G+AYGQIG LP+A +A++MGLNLLE+++LQLPS + D R A P +
Sbjct: 152 GVVSSFLGRAYGQIGNELPIAVGLVAVLMGLNLLEVVQLQLPSLMPDVDVRKAP--VPPA 209
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFA 298
+QAYLAG TFALAASPCSTPVLATLL YV++++DPL GG+LLL+YT GYVAPLLLAASF
Sbjct: 210 LQAYLAGATFALAASPCSTPVLATLLAYVSSTRDPLEGGSLLLAYTCGYVAPLLLAASFT 269
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFPT 337
G ++ LL+ R++S+W+ P SG LL+ GG YT L RL P+
Sbjct: 270 GTVKQLLALRQYSAWVTPASGVLLVAGGTYTLLSRLVPS 308
>gi|20153422|gb|AAL84598.2|AF474178_1 putative c-type cytochrome biogenesis protein [Chlamydomonas
reinhardtii]
Length = 308
Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 147/279 (52%), Positives = 201/279 (72%), Gaps = 9/279 (3%)
Query: 64 IGNAKALTMENVLEGAASVYTMADGSLGDMFGGFLYSAGQQANEAVLGQLSALSFTSLAV 123
+ ++K+L + +Y ++D + D+ G L++AGQ A+ V QL+ ++ +
Sbjct: 34 VASSKSLKRQLRAVSGQELYELSDQA-QDLVQG-LFAAGQSADALVSQQLTGVTPLTYLA 91
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAF-----GSGKSRAQIIGDSIAFSLGLATTLALL 178
+ GAGLVTSLSPCTLSVLPLT+GYIG + G+G S+ + +++FS GLATTLA+L
Sbjct: 92 VLGAGLVTSLSPCTLSVLPLTIGYIGGYSQDDNGNGASKPNLGLQAVSFSFGLATTLAVL 151
Query: 179 GVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSS 238
GV +SF G+AYGQIG LP+ +A++MGLNLLE+++LQLPS + D R A P +
Sbjct: 152 GVVSSFLGRAYGQIGNELPITVGLVAVLMGLNLLEVVQLQLPSLMPDVDVRKAP--VPPA 209
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFA 298
+QAYLAG TFALAASPCSTPVLATLL YV++++DPL GG+LLL+YT GYVAPLLLAASF
Sbjct: 210 LQAYLAGATFALAASPCSTPVLATLLAYVSSTRDPLEGGSLLLAYTCGYVAPLLLAASFT 269
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFPT 337
G ++ LL+ R++S+W+ P SG LL+ GG YT L RL P+
Sbjct: 270 GTVKQLLALRQYSAWVTPASGVLLVAGGTYTLLSRLVPS 308
>gi|302850987|ref|XP_002957019.1| hypothetical protein VOLCADRAFT_67654 [Volvox carteri f.
nagariensis]
gi|300257737|gb|EFJ41982.1| hypothetical protein VOLCADRAFT_67654 [Volvox carteri f.
nagariensis]
Length = 253
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/241 (60%), Positives = 181/241 (75%), Gaps = 5/241 (2%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFG-SGKS 156
L+SAGQ A+ V QLS ++ + +IFGAGLVTSLSPCTLSVLPLT+GYIG + G
Sbjct: 17 LFSAGQSADALVASQLSGVTPLTYVIIFGAGLVTSLSPCTLSVLPLTIGYIGGYSKDGTD 76
Query: 157 RAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIE 216
R + ++AFS GLATTLA LGV +SF G+AYGQIG GLP+A +A+VMGLNLLE++
Sbjct: 77 RPSLSAQALAFSFGLATTLAALGVISSFLGRAYGQIGDGLPVAVGLVAVVMGLNLLEVLP 136
Query: 217 LQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIG 276
LQLPS + D R A P ++QAYLAG TFALAASPCSTPVLATLL YV+ ++DPL G
Sbjct: 137 LQLPSL--DVDVRKA--PVPPALQAYLAGATFALAASPCSTPVLATLLAYVSATRDPLEG 192
Query: 277 GTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFP 336
G LLL+YT GYV PLLLAASF G ++ L++ R++S+W+ P SG LL+ GG YT L RL P
Sbjct: 193 GALLLAYTCGYVGPLLLAASFTGMVKELMALRQYSAWVTPASGVLLVAGGTYTLLSRLVP 252
Query: 337 T 337
+
Sbjct: 253 S 253
>gi|346703176|emb|CBX25275.1| hypothetical_protein [Oryza brachyantha]
Length = 255
Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 153/226 (67%), Positives = 170/226 (75%), Gaps = 44/226 (19%)
Query: 89 SLGDMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYI 148
S+GD FG LYSAGQQANE V QLSALSFTSLAVIFGAGLVTSLSPC LSVLPLTLGYI
Sbjct: 42 SIGDWFGNLLYSAGQQANEVVQDQLSALSFTSLAVIFGAGLVTSLSPCILSVLPLTLGYI 101
Query: 149 GAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMG 208
++G+S+AFSL LATTLA+LGV ASFAGKAYGQ+G GLP+AASGLA++MG
Sbjct: 102 -----------VVGNSVAFSLELATTLAILGVAASFAGKAYGQVGQGLPVAASGLAVIMG 150
Query: 209 LNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVA 268
LNLLE VQAYLAGLTFALAASPCSTPVLATLLGYVA
Sbjct: 151 LNLLE-------------------------VQAYLAGLTFALAASPCSTPVLATLLGYVA 185
Query: 269 TSK--------DPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLS 306
TS+ DP++GG+LLL+YTTGYVAPLL+AASFAGALQ +S
Sbjct: 186 TSRVCITGGSQDPIVGGSLLLTYTTGYVAPLLIAASFAGALQWCIS 231
>gi|346703265|emb|CBX25363.1| hypothetical_protein [Oryza brachyantha]
Length = 249
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 160/262 (61%), Positives = 184/262 (70%), Gaps = 46/262 (17%)
Query: 51 TFLSTLTVANLAAIGNAKALTMENVLEGAASVYTMADGSLGDMFGGFLYSAGQQANEAVL 110
T+ S + V +L A G A A + + L +S +AD S+GD FG LYSAGQQANEAV
Sbjct: 4 TWCSLVAVGSLVAAGAANATELGDSL--GSSGLALADISIGDWFGNLLYSAGQQANEAVQ 61
Query: 111 GQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLG 170
QLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIG + S ++ G+
Sbjct: 62 DQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGKY----SGIEMTGN------- 110
Query: 171 LATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRA 230
TLA+LGV ASFAGKAYGQ+G GLP+AASGLA++MGLNLLE
Sbjct: 111 ---TLAILGVAASFAGKAYGQVGQGLPVAASGLAVIMGLNLLE----------------- 150
Query: 231 AAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSK------DPLIGGTLLLSYT 284
VQAYLAGLTFALAASPCSTPVLATLLGYVATS+ DP++GG+LLL+YT
Sbjct: 151 -------GVQAYLAGLTFALAASPCSTPVLATLLGYVATSRVCITGGDPIVGGSLLLTYT 203
Query: 285 TGYVAPLLLAASFAGALQSLLS 306
TGYVAPLL+ ASFAGALQ +S
Sbjct: 204 TGYVAPLLIEASFAGALQWCIS 225
>gi|346703178|emb|CBX25277.1| hypothetical_protein [Oryza brachyantha]
Length = 283
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 169/314 (53%), Positives = 189/314 (60%), Gaps = 76/314 (24%)
Query: 30 GVSVHKSHSVAKKSIRCFSTNTFLSTLTVANLAAIGNAKALTMENVLEGAASV-YTMADG 88
GV + SV+K ++R A L A L VL S +AD
Sbjct: 44 GVPCERGSSVSKAAVRG------------ARLEAAARCSLLRRPPVLLATGSSGLALADI 91
Query: 89 SLGDMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYI 148
S+GD FG LYSAGQQANEAV QLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYI
Sbjct: 92 SIGDWFGNLLYSAGQQANEAVQDQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYI 151
Query: 149 GAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMG 208
++G+S+AFSLGLATTLA+LGV ASFAGKAYGQ+G GLP+AASGLA++MG
Sbjct: 152 -----------VVGNSVAFSLGLATTLAILGVAASFAGKAYGQVGQGLPVAASGLAVIMG 200
Query: 209 LNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVA 268
LNLLE VQAYLAGLTFALAASPCSTPVLATLLGYVA
Sbjct: 201 LNLLE------------------------GVQAYLAGLTFALAASPCSTPVLATLLGYVA 236
Query: 269 TSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLY 328
TS+ + GG F + L F KF GA LLGGG+Y
Sbjct: 237 TSRVCITGG-------------------FISCINILSPFLKF--------GAFLLGGGVY 269
Query: 329 TFLDRLFP-TTMAM 341
T LDRLFP T+M M
Sbjct: 270 TLLDRLFPATSMVM 283
>gi|300866681|ref|ZP_07111365.1| cytochrome c biogenesis protein, transmembrane region [Oscillatoria
sp. PCC 6506]
gi|300335281|emb|CBN56525.1| cytochrome c biogenesis protein, transmembrane region [Oscillatoria
sp. PCC 6506]
Length = 245
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 137/242 (56%), Positives = 174/242 (71%), Gaps = 6/242 (2%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q AN V QL+ +S S+ VIF AGL+TSL+PC LS+LP+T+GYIG + KSR
Sbjct: 9 LYEIAQFANALVKTQLTHISSVSIGVIFLAGLLTSLTPCMLSMLPITIGYIGGY-EAKSR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q + S FSLGLATTLA LG+ ASFAGK YGQIG GLP+ S +AI+MGLNLLE + L
Sbjct: 68 IQAVAQSTWFSLGLATTLAALGILASFAGKVYGQIGIGLPIIVSIIAILMGLNLLEALPL 127
Query: 218 QLPSFFDNFDPRA-AAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIG 276
QLPSF D A + P+ V++YL GLTF L ASPCSTPVLATLL +++T+ D ++G
Sbjct: 128 QLPSF----DAAGWIAKDLPAGVRSYLLGLTFGLVASPCSTPVLATLLAWISTTGDTILG 183
Query: 277 GTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFP 336
LLLSYT GYV PL+LA +F +++ LL R++SSWI P+SG LL+G G+++ L RL P
Sbjct: 184 AVLLLSYTAGYVMPLILAGTFTASIKKLLELRRWSSWITPVSGVLLVGFGVFSLLSRLAP 243
Query: 337 TT 338
T
Sbjct: 244 IT 245
>gi|434399174|ref|YP_007133178.1| cytochrome c biogenesis protein transmembrane region [Stanieria
cyanosphaera PCC 7437]
gi|428270271|gb|AFZ36212.1| cytochrome c biogenesis protein transmembrane region [Stanieria
cyanosphaera PCC 7437]
Length = 248
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 136/237 (57%), Positives = 174/237 (73%), Gaps = 2/237 (0%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q AN V QL+ LS S+ +IF AGL+TSL+PC LS+LP+T+GYIG + S +SR
Sbjct: 9 LYQLEQFANHLVNTQLNHLSIVSIGLIFLAGLLTSLTPCMLSMLPITIGYIGGYES-QSR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q SI F+LGLATTLA LG+ A+ GK YGQIG GLP+ S +AI+MGLNLLEI+ L
Sbjct: 68 LQATIQSIWFALGLATTLAGLGIIATSIGKVYGQIGFGLPILVSLVAIIMGLNLLEILPL 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
Q P+F N DP A A N P V++Y GLTF L ASPCSTPVLA+LL +VAT+K ++G
Sbjct: 128 QFPAF-GNSDPNALAKNLPREVRSYSLGLTFGLVASPCSTPVLASLLAWVATTKSLIVGT 186
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
+LLL+Y TGYVAPL+LA +F +L+ LLS R++S WINP+SG LLL G+++ L R+
Sbjct: 187 SLLLAYATGYVAPLILAGTFTASLKKLLSLRRWSGWINPVSGTLLLSFGIFSLLSRV 243
>gi|75910027|ref|YP_324323.1| cytochrome c biogenesis protein, transmembrane region [Anabaena
variabilis ATCC 29413]
gi|75703752|gb|ABA23428.1| Cytochrome c biogenesis protein, transmembrane region [Anabaena
variabilis ATCC 29413]
Length = 246
Score = 244 bits (622), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 130/238 (54%), Positives = 173/238 (72%), Gaps = 6/238 (2%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
+Y + AN V QL+ LS S+ +IF AGL+TSL+PC LS+LP+T+GYIG + KSR
Sbjct: 9 IYQLEKFANTLVSYQLTHLSLLSIGIIFAAGLLTSLTPCMLSMLPITIGYIGGY-EAKSR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S F+LGLATTLA LGV A+ GK YGQIG GLP+ S +AI+MGLNLLE + L
Sbjct: 68 WQAAAQSTWFALGLATTLAGLGVVAALVGKVYGQIGIGLPIIVSIIAILMGLNLLEALPL 127
Query: 218 QLPSFFD-NFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIG 276
QLPSF D N+ P+ + PS V++Y GLTF L ASPCSTPVLA+LLG+VA ++D ++G
Sbjct: 128 QLPSFGDTNWIPQ----DLPSGVRSYGIGLTFGLVASPCSTPVLASLLGWVANTQDLILG 183
Query: 277 GTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LL+SYT GYV PL+LA +F +++ LL R++S WINP+SGALL+G G+++ + R+
Sbjct: 184 AVLLISYTAGYVTPLILAGTFTASIKKLLELRRWSGWINPVSGALLVGFGVFSLISRI 241
>gi|428305498|ref|YP_007142323.1| cytochrome c biogenesis protein transmembrane region [Crinalium
epipsammum PCC 9333]
gi|428247033|gb|AFZ12813.1| cytochrome c biogenesis protein transmembrane region [Crinalium
epipsammum PCC 9333]
Length = 246
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/237 (54%), Positives = 171/237 (72%), Gaps = 4/237 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY GQ AN V QL+ LS S+ +IF AGL+TSL+PC LS+LP+T+GYIG + S KSR
Sbjct: 9 LYEIGQFANTLVSNQLTHLSLLSIGIIFTAGLLTSLTPCMLSMLPITIGYIGGYES-KSR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S F+LGLATTLA LG+ A+ G+ YGQ+ GLP+ S +AI+MGLNLLE + L
Sbjct: 68 LQAAIQSTWFALGLATTLAGLGIFAALVGQVYGQLAIGLPIVVSIVAIIMGLNLLEALPL 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
QLPSF + + P V++YL GLTF L ASPCSTPVLA+LL +VAT++D ++GG
Sbjct: 128 QLPSFGGL---EWISKDLPEGVRSYLIGLTFGLVASPCSTPVLASLLAWVATTQDLILGG 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLLSYT GYVAPL+LA +F +++ LL R++SSWI P+SG LL+G G+++ L R+
Sbjct: 185 VLLLSYTAGYVAPLILAGTFTASIKKLLELRRWSSWITPVSGVLLVGFGVFSLLYRI 241
>gi|334119590|ref|ZP_08493675.1| cytochrome c biogenesis protein transmembrane region [Microcoleus
vaginatus FGP-2]
gi|333457752|gb|EGK86373.1| cytochrome c biogenesis protein transmembrane region [Microcoleus
vaginatus FGP-2]
Length = 243
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/241 (54%), Positives = 173/241 (71%), Gaps = 8/241 (3%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q AN V QL+ LS S+ VIF AGL+TSL+PC LS+LP+T+GYIG + KSR
Sbjct: 8 LYEIAQFANNLVNTQLTNLSLVSVGVIFLAGLLTSLTPCMLSMLPITIGYIGGY-EAKSR 66
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S FSLGLATTLA LG+ ASFAG+ YG+IG GLP+ S +AI+MGLNLLE + L
Sbjct: 67 LQAAAQSAWFSLGLATTLAGLGIVASFAGQVYGKIGLGLPILVSIIAILMGLNLLEALPL 126
Query: 218 QLPSFFD--NFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLI 275
Q+PSF D + P+ N P+ +++YL GLTF L ASPCSTPVLATLL +V+ + D ++
Sbjct: 127 QMPSF-DAVGWVPK----NLPAGLRSYLLGLTFGLVASPCSTPVLATLLAWVSKTGDTVL 181
Query: 276 GGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLF 335
GG LLL Y GYVAPL++A +F +++ LL R++SSWI P+SG LL+G G+++ L R+
Sbjct: 182 GGVLLLFYAAGYVAPLIIAGTFTASIKKLLELRRWSSWITPVSGVLLVGFGVFSLLSRIL 241
Query: 336 P 336
P
Sbjct: 242 P 242
>gi|332712212|ref|ZP_08432140.1| cytochrome c biogenesis protein [Moorea producens 3L]
gi|332349018|gb|EGJ28630.1| cytochrome c biogenesis protein [Moorea producens 3L]
gi|332688365|gb|AEE88258.1| putative cytochrome c biogenesis protein [Moorea producens 3L]
Length = 246
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/243 (53%), Positives = 172/243 (70%), Gaps = 4/243 (1%)
Query: 92 DMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAF 151
D F LY Q AN V QL+ LS S+A+IF AGL+TSL+PC LS+LP+T+GYIG +
Sbjct: 3 DTFSTQLYQLQQFANNLVDSQLTHLSLVSIAIIFAAGLLTSLTPCMLSMLPITIGYIGGY 62
Query: 152 GSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNL 211
+ R Q S+ FSLGLATTLA LG+ A+ G+ YGQIG GLP+ S +AI+MGLNL
Sbjct: 63 -ENQGRLQAATQSVWFSLGLATTLAALGIIAASIGRVYGQIGVGLPIIVSLIAIIMGLNL 121
Query: 212 LEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSK 271
LE + LQ P++ D + +P +++YL GLTF L ASPCSTPVLATLL +V ++K
Sbjct: 122 LEALPLQFPTW-GGMD--WISQEWPKGLRSYLIGLTFGLVASPCSTPVLATLLAWVVSTK 178
Query: 272 DPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFL 331
D ++GG LLLSYT GYVAPL+LA +F +++ LL R++SSWI P+SGALL+ G+++ L
Sbjct: 179 DLVLGGALLLSYTAGYVAPLILAGTFTASIKRLLELRQWSSWITPVSGALLVAFGVFSLL 238
Query: 332 DRL 334
R+
Sbjct: 239 SRI 241
>gi|307109336|gb|EFN57574.1| hypothetical protein CHLNCDRAFT_20834 [Chlorella variabilis]
Length = 339
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/259 (55%), Positives = 177/259 (68%), Gaps = 24/259 (9%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
L+ QAN+ V QL+ L+ S A++ GAGL+TSLSPCTLSVLPLT+GYIG + G S
Sbjct: 84 LFELVNQANDLVAQQLTGLTPISFAIVLGAGLLTSLSPCTLSVLPLTIGYIGGYSGGSSG 143
Query: 158 AQ--------------------IIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLP 197
+ ++ + AFS GLATTLA LGV +S G AYGQIG GLP
Sbjct: 144 SSSSSSSSGGGGGSSSSGSDSSLLLRAGAFSAGLATTLAALGVASSLLGGAYGQIGDGLP 203
Query: 198 LAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCST 257
+A S +A+ MGLNLLE++ L+LPS + D R A P +VQAYLAG+TFALAASPCST
Sbjct: 204 IAVSVVAVAMGLNLLEVLPLRLPSL--DLDVRQLA--VPPAVQAYLAGMTFALAASPCST 259
Query: 258 PVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPM 317
P+LATLL YV+T++DP+ GG LL +YT GYVAPLL AA F GALQ +LS R++S+WI P
Sbjct: 260 PILATLLAYVSTTRDPVTGGALLFAYTLGYVAPLLAAALFTGALQRILSVRQWSAWIMPA 319
Query: 318 SGALLLGGGLYTFLDRLFP 336
SG LLL GG Y L RL P
Sbjct: 320 SGVLLLAGGTYGLLTRLVP 338
>gi|427720604|ref|YP_007068598.1| cytochrome c biogenesis protein transmembrane region [Calothrix sp.
PCC 7507]
gi|427353040|gb|AFY35764.1| cytochrome c biogenesis protein transmembrane region [Calothrix sp.
PCC 7507]
Length = 245
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 126/237 (53%), Positives = 168/237 (70%), Gaps = 4/237 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
+Y Q AN V QL+ L S+ +IF AGL+TSL+PC LS+LP+T+GYIG + KSR
Sbjct: 9 IYELEQFANTLVSDQLTHLGVVSVGIIFVAGLLTSLTPCMLSMLPITIGYIGGY-EAKSR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S F+LGLATTLA +G+ A+F GK YGQIG GLP+ S +AI+MGLNLLE + +
Sbjct: 68 LQAAAQSTWFALGLATTLACMGIIAAFVGKVYGQIGIGLPIIVSIIAILMGLNLLEALPI 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
Q PS + + + PS V++YL GLTF L ASPCSTPVLA+LL +VA ++D ++G
Sbjct: 128 QFPSIGET---NWISPDLPSGVRSYLIGLTFGLVASPCSTPVLASLLVWVANTQDWILGA 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLLSYT GYVAPL+LA +F A++ LL R++S WINP+SG LL+G G+++ L R+
Sbjct: 185 VLLLSYTAGYVAPLILAGTFTAAIKKLLELRRWSGWINPVSGVLLVGFGVFSLLSRI 241
>gi|17230614|ref|NP_487162.1| hypothetical protein alr3122 [Nostoc sp. PCC 7120]
gi|6175552|gb|AAF05083.1|AF136760_1 putative c-type cytochrome biogenesis protein CcdA [Nostoc sp. PCC
7120]
gi|17132217|dbj|BAB74821.1| ccdA [Nostoc sp. PCC 7120]
Length = 246
Score = 240 bits (613), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 127/237 (53%), Positives = 169/237 (71%), Gaps = 4/237 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
+Y + AN V QL+ LS S+ +IF AGL+TSL+PC LS+LP+T+GYIG + KSR
Sbjct: 9 IYQLEKFANTLVSYQLTHLSLLSIGIIFAAGLLTSLTPCMLSMLPITIGYIGGY-EAKSR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S F+LGLATTLA LGV A+ GK YGQIG GLP+ S +AI+MGLNLLE + L
Sbjct: 68 WQAAAQSTWFALGLATTLAGLGVAAAMVGKVYGQIGIGLPIIVSIIAILMGLNLLEALPL 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
QLPSF D + + P V++Y GLTF L ASPCSTPVLA+LLG+VA ++D ++G
Sbjct: 128 QLPSFGDT---NWISQDLPPGVRSYGIGLTFGLVASPCSTPVLASLLGWVANTQDLILGA 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LL+SYT GYV PL+LA +F +++ LL R++S WINP+SGALL+G G+++ + R+
Sbjct: 185 VLLISYTAGYVTPLILAGTFTASIKKLLELRRWSGWINPVSGALLVGFGVFSLISRI 241
>gi|427728390|ref|YP_007074627.1| cytochrome c biogenesis protein [Nostoc sp. PCC 7524]
gi|427364309|gb|AFY47030.1| cytochrome c biogenesis protein [Nostoc sp. PCC 7524]
Length = 246
Score = 240 bits (613), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 128/237 (54%), Positives = 170/237 (71%), Gaps = 4/237 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
+Y Q AN V QL+ LS S+ +IF AGL+TSL+PC LS+LP+T+GYIG + KSR
Sbjct: 9 VYQLEQFANTLVSHQLTHLSLLSVGIIFTAGLLTSLTPCMLSMLPITIGYIGGY-EAKSR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S F+LGLATTLA LG+ A+ GK YGQIG GLP+ S +AI+MGLNLLE + L
Sbjct: 68 LQAAVQSTWFALGLATTLAGLGITAALVGKVYGQIGIGLPIIVSIIAILMGLNLLEALPL 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
QLPSF D + + P V++Y GLTF L ASPCSTPVLA+LLG+VA ++D ++G
Sbjct: 128 QLPSFGDT---NWISPDLPPGVRSYGIGLTFGLVASPCSTPVLASLLGWVANTQDLILGA 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LL+SYT GYVAPL++A +F A++ LL R++S WINP+SGALL+G G+++ + R+
Sbjct: 185 VLLISYTAGYVAPLIVAGTFTAAIKKLLELRRWSGWINPVSGALLVGFGVFSLISRI 241
>gi|428301087|ref|YP_007139393.1| cytochrome c biogenesis protein transmembrane region [Calothrix sp.
PCC 6303]
gi|428237631|gb|AFZ03421.1| cytochrome c biogenesis protein transmembrane region [Calothrix sp.
PCC 6303]
Length = 248
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 137/239 (57%), Positives = 172/239 (71%), Gaps = 8/239 (3%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY A+ V QL+ LSF S+ VIF AGL+TSL+PC LS+LP+T+GYIG + KSR
Sbjct: 9 LYQLEHFADRIVASQLTHLSFVSIGVIFLAGLLTSLTPCMLSMLPITIGYIGGY-EAKSR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S FSLGLATTLA+LG+ A+ GK YGQ+G GLP+ S LAI+MGLNLLE + L
Sbjct: 68 WQAAAQSTWFSLGLATTLAVLGIFAAGFGKVYGQVGIGLPIIVSVLAILMGLNLLEALPL 127
Query: 218 QLPSF--FDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLI 275
QLPSF D P N PS +AY GL+F L ASPCSTPVLA+LLG+VAT KD ++
Sbjct: 128 QLPSFGGTDWISP-----NLPSGFRAYCIGLSFGLVASPCSTPVLASLLGWVATQKDLVL 182
Query: 276 GGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
GG LLLSYT GYVAPL+LA +F +++ LL R++SSWINP+SG +L+G GL++ L R+
Sbjct: 183 GGVLLLSYTLGYVAPLILAGTFTASIKKLLELRRWSSWINPVSGVMLVGFGLFSLLSRI 241
>gi|428209237|ref|YP_007093590.1| cytochrome c biogenesis protein transmembrane region
[Chroococcidiopsis thermalis PCC 7203]
gi|428011158|gb|AFY89721.1| cytochrome c biogenesis protein transmembrane region
[Chroococcidiopsis thermalis PCC 7203]
Length = 244
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/237 (53%), Positives = 170/237 (71%), Gaps = 4/237 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q A+ V QLS L + S+ +IF AGL+TSL+PC LS+LP+T+GYIG + KSR
Sbjct: 9 LYKLEQFADLLVAEQLSHLGWVSIGIIFTAGLLTSLTPCMLSMLPITIGYIGGY-EAKSR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S F+LGLATTLA LG+ A+ GK YGQ+G GLP+ S +AI+MGLNLLE + +
Sbjct: 68 WQAAAQSTWFALGLATTLAALGIVAALVGKVYGQVGIGLPIIVSIIAILMGLNLLEALPI 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
QLPSF D + +FP +V++YL GLTF L ASPCSTPVLATLL +V T+++ ++G
Sbjct: 128 QLPSF-GGMD--WISKDFPPAVRSYLIGLTFGLVASPCSTPVLATLLAWVTTTQNTILGA 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLL+YT GYV PL+LA +F +++ LL R++S WI P+SGALL+G G+++ L R+
Sbjct: 185 ALLLAYTAGYVTPLILAGTFTASIKKLLELRQWSGWITPVSGALLVGFGVFSLLSRI 241
>gi|427736893|ref|YP_007056437.1| cytochrome c biogenesis protein [Rivularia sp. PCC 7116]
gi|427371934|gb|AFY55890.1| cytochrome c biogenesis protein [Rivularia sp. PCC 7116]
Length = 243
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 127/237 (53%), Positives = 167/237 (70%), Gaps = 4/237 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q AN V QL+ LS S+ +IF AGL+TSL+PC LS+LP+T+GYIG + KSR
Sbjct: 9 LYQLEQFANSLVSNQLTHLSLISIGIIFLAGLLTSLTPCMLSMLPITIGYIGGY-EAKSR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S F+LGLATTLA LG+ A+ GK YGQIG GLP+ S +AI+MGLNLLE + L
Sbjct: 68 IQAAAQSTWFALGLATTLAGLGIIAATVGKVYGQIGIGLPIVVSVIAILMGLNLLEALPL 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
QLP D + P V+AY GL+F L ASPCSTPVLA+LLG+VA++KD ++G
Sbjct: 128 QLP---DWGGTDWISQELPQGVRAYCIGLSFGLVASPCSTPVLASLLGWVASTKDLILGA 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLLSYT GYV PL+LA +F +++ ++ R+FS WINP+SGALL+G G+++ + R+
Sbjct: 185 ALLLSYTAGYVTPLILAGTFTASIKKIIEIRRFSGWINPVSGALLVGFGVFSLISRI 241
>gi|428211356|ref|YP_007084500.1| cytochrome c biogenesis protein [Oscillatoria acuminata PCC 6304]
gi|427999737|gb|AFY80580.1| cytochrome c biogenesis protein [Oscillatoria acuminata PCC 6304]
Length = 245
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 127/243 (52%), Positives = 174/243 (71%), Gaps = 8/243 (3%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q A+ V QLS LS+ S+ +IF AGL+TSL+PC LS+LP+T+GYIG + +SR
Sbjct: 9 LYHLQQLADGLVSSQLSHLSWVSVLIIFVAGLLTSLTPCMLSMLPITIGYIGGY-EAQSR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S F+LGLATTLA LG+ A++ G+ YGQ+G GLP+ S +AI+MGLNLL+ + L
Sbjct: 68 IQAAAQSTWFALGLATTLAALGIVAAYLGQVYGQVGIGLPILVSVIAILMGLNLLDALPL 127
Query: 218 QLPSFFDNFD--PRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLI 275
+LPS D + P+ + P V++YL GLTF L ASPCSTPVLATLL ++A+++D ++
Sbjct: 128 RLPSL-DGMELIPK----DVPDGVRSYLLGLTFGLVASPCSTPVLATLLAWIASTQDVML 182
Query: 276 GGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLF 335
GG LLL+YT GYVAPL+LA +F ++ LL R++S WI P+SGALL+G G+++ L RL
Sbjct: 183 GGALLLAYTAGYVAPLILAGTFTATIKKLLEVRRWSGWITPVSGALLVGFGVFSLLFRLL 242
Query: 336 PTT 338
P
Sbjct: 243 PVV 245
>gi|434404069|ref|YP_007146954.1| cytochrome c biogenesis protein [Cylindrospermum stagnale PCC 7417]
gi|428258324|gb|AFZ24274.1| cytochrome c biogenesis protein [Cylindrospermum stagnale PCC 7417]
Length = 246
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 124/237 (52%), Positives = 168/237 (70%), Gaps = 4/237 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
+Y Q AN V QL+ LS S+ VIF AGL+TSL+PC LS+LP+T+GYIG + KSR
Sbjct: 9 IYELEQFANTLVSNQLTHLSVVSIGVIFVAGLLTSLTPCMLSMLPITIGYIGGY-EAKSR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S F+LGLATTLA +G+ A GK YGQ+G GLP+ S +AI+MGLNLLE + L
Sbjct: 68 LQAAAQSTWFALGLATTLAGMGIIAGLVGKVYGQVGIGLPIIVSIIAILMGLNLLEALPL 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
Q PS + + + P+ +++YL GLTF L ASPCSTPVLA+LLG+VA ++D ++G
Sbjct: 128 QFPSLGET---NWISPDLPTGLRSYLIGLTFGLVASPCSTPVLASLLGWVANTQDLILGA 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLLSYT GYVAPL+LA +F +++ LL R++S WINP+SG LL+G G+++ + R+
Sbjct: 185 VLLLSYTAGYVAPLILAGTFTASIKKLLELRRWSGWINPVSGVLLVGFGVFSLISRI 241
>gi|384251993|gb|EIE25470.1| DsbD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 248
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 142/256 (55%), Positives = 180/256 (70%), Gaps = 13/256 (5%)
Query: 85 MAD--GSLGDMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLP 142
MAD G+ D+ LYS G + + V QL +S + A+ FGAGL+TSLSPCTLSVLP
Sbjct: 1 MADTGGTTSDL----LYSVGNRMDALVQQQLQGVSIATFAITFGAGLLTSLSPCTLSVLP 56
Query: 143 LTLGYIGAFGSGKSRAQI---IGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLA 199
LTLGYIG + + + + + + FS GLATTLA+LG+ +S G+ YGQ G GLP+A
Sbjct: 57 LTLGYIGGYSTSEENSNTGSTLSRAAVFSSGLATTLAVLGIASSLLGRTYGQFGDGLPIA 116
Query: 200 ASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPV 259
+AI+MGLNLLE++ L + D R +A P VQAYLAGLTFALAASPCSTPV
Sbjct: 117 VGLVAIIMGLNLLELLPLA--LPSLDVDVRKVSA--PPLVQAYLAGLTFALAASPCSTPV 172
Query: 260 LATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSG 319
LATLL YVATS+DP+ GG LLL+YT+GYV PL++AA+FAG L+ +L+ R++S+WI P SG
Sbjct: 173 LATLLAYVATSQDPVTGGALLLAYTSGYVIPLMVAATFAGTLKQVLAMRQWSAWITPASG 232
Query: 320 ALLLGGGLYTFLDRLF 335
LLL GG YT L RL
Sbjct: 233 VLLLSGGTYTLLSRLI 248
>gi|428320149|ref|YP_007118031.1| cytochrome c biogenesis protein transmembrane region [Oscillatoria
nigro-viridis PCC 7112]
gi|428243829|gb|AFZ09615.1| cytochrome c biogenesis protein transmembrane region [Oscillatoria
nigro-viridis PCC 7112]
Length = 243
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 130/241 (53%), Positives = 172/241 (71%), Gaps = 8/241 (3%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY AN V QL+ LS S+ VIF AGL+TSL+PC LS+LP+T+GYIG + KSR
Sbjct: 8 LYQLALFANNLVNTQLTNLSLVSVGVIFLAGLLTSLTPCMLSMLPITIGYIGGY-EAKSR 66
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S FSLGLATTLA LG+ ASFAG+ YG+IG GLP+ S +AI+MGLNLLE + L
Sbjct: 67 LQAAAQSAWFSLGLATTLAGLGIVASFAGQVYGKIGLGLPILVSIIAILMGLNLLEALPL 126
Query: 218 QLPSFFD--NFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLI 275
++PSF D + P+ + P+ V++YL GLTF L ASPCSTPVLATLL +V+ + D ++
Sbjct: 127 EMPSF-DAVGWVPK----DLPAGVRSYLLGLTFGLVASPCSTPVLATLLAWVSKTGDTVL 181
Query: 276 GGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLF 335
GG LLL Y GYVAPL++A +F +++ LL R++SSWI P+SG LL+G G+++ L R+
Sbjct: 182 GGVLLLFYAAGYVAPLIIAGTFTASIKKLLELRRWSSWITPVSGVLLVGFGVFSLLSRIL 241
Query: 336 P 336
P
Sbjct: 242 P 242
>gi|354568979|ref|ZP_08988139.1| cytochrome c biogenesis protein transmembrane region [Fischerella
sp. JSC-11]
gi|353539191|gb|EHC08683.1| cytochrome c biogenesis protein transmembrane region [Fischerella
sp. JSC-11]
Length = 243
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 125/236 (52%), Positives = 166/236 (70%), Gaps = 4/236 (1%)
Query: 99 YSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRA 158
Y Q AN V QL+ LS S+ VIF AGL+TSL+PC LS+LP+T+GYIG + KSR
Sbjct: 10 YELEQFANSLVSNQLAHLSLLSIGVIFIAGLLTSLTPCMLSMLPITIGYIGGY-EAKSRL 68
Query: 159 QIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQ 218
Q S F+ GLATTLA LG+ A+ GK YGQIG GLP+ S +AI+MGLNLLE + LQ
Sbjct: 69 QAAAQSTWFAFGLATTLASLGIVAALVGKVYGQIGFGLPIIVSVIAILMGLNLLEALPLQ 128
Query: 219 LPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGT 278
+PSF + P V+AY GL+F L ASPCSTPVLA+LLG+VA ++D ++G
Sbjct: 129 MPSFGGT---EWISQELPQGVRAYAIGLSFGLVASPCSTPVLASLLGWVANTQDLILGAV 185
Query: 279 LLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LL+SYT GYVAPL+LA +F +++ +L R++S WINP+SGALL+G G+++ + R+
Sbjct: 186 LLISYTAGYVAPLILAGTFTASIKKILELRRWSGWINPISGALLVGFGVFSLVSRI 241
>gi|113474482|ref|YP_720543.1| cytochrome c biogenesis protein, transmembrane region
[Trichodesmium erythraeum IMS101]
gi|110165530|gb|ABG50070.1| cytochrome c biogenesis protein, transmembrane region
[Trichodesmium erythraeum IMS101]
Length = 243
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 129/241 (53%), Positives = 163/241 (67%), Gaps = 4/241 (1%)
Query: 97 FLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS 156
F Y Q AN V QL+ LS+ SL IF AGL+TSL+PC LS+LP+T+GYIG + KS
Sbjct: 7 FFYETAQYANSLVKTQLTHLSWVSLVTIFVAGLLTSLTPCMLSMLPITIGYIGGY-EAKS 65
Query: 157 RAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIE 216
R Q S FSLGLATTLA LG+ AS GK YGQ+G GLP+ S +AI MGLNLLE +
Sbjct: 66 RIQATVQSAWFSLGLATTLAGLGIIASLLGKVYGQVGVGLPIVVSIIAIFMGLNLLEALP 125
Query: 217 LQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIG 276
L +PSF D+ + + P V++YL GLTF L ASPCSTPVLATLL +V+T+ D ++G
Sbjct: 126 LPMPSF-DSMG--WISQDLPKGVRSYLLGLTFGLIASPCSTPVLATLLAWVSTTGDLILG 182
Query: 277 GTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFP 336
G LL Y GYV PL+LA +F ++ L RK+SSWI P SG LL+G G+++ L R+ P
Sbjct: 183 GFFLLFYAMGYVTPLILAGAFTANIKKFLEIRKWSSWITPASGILLVGFGVFSLLSRIIP 242
Query: 337 T 337
Sbjct: 243 V 243
>gi|427710687|ref|YP_007053064.1| cytochrome c biogenesis protein transmembrane region [Nostoc sp.
PCC 7107]
gi|427363192|gb|AFY45914.1| cytochrome c biogenesis protein transmembrane region [Nostoc sp.
PCC 7107]
Length = 246
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/237 (52%), Positives = 167/237 (70%), Gaps = 4/237 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
+Y Q AN V QL+ LS S+ +IF AGL+TSL+PC LS+LP+T+GYIG + KSR
Sbjct: 9 IYELEQFANNLVANQLTHLSLLSVGIIFMAGLLTSLTPCMLSMLPITIGYIGGY-EAKSR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S F+LGLATTLA +G+ A GK YGQIG GLP+ S +AI+MGLNLLE + +
Sbjct: 68 LQAAAQSTWFALGLATTLAGMGIIAGVVGKVYGQIGVGLPIIVSVIAIIMGLNLLEALPI 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
Q PS + + + P V++Y GLTF L ASPCSTPVLA+LL +VA+++D ++G
Sbjct: 128 QFPSLGET---NWISPDLPPGVRSYSLGLTFGLVASPCSTPVLASLLTWVASTQDLILGA 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLLSYT GYVAPL+LA +F A++ LL R++S WINP+SGALL+G G+++ + R+
Sbjct: 185 VLLLSYTAGYVAPLILAGTFTAAIKKLLELRRWSGWINPVSGALLVGFGVFSLISRI 241
>gi|434391839|ref|YP_007126786.1| cytochrome c biogenesis protein transmembrane region [Gloeocapsa
sp. PCC 7428]
gi|428263680|gb|AFZ29626.1| cytochrome c biogenesis protein transmembrane region [Gloeocapsa
sp. PCC 7428]
Length = 246
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/243 (51%), Positives = 172/243 (70%), Gaps = 4/243 (1%)
Query: 92 DMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAF 151
+++ LY Q AN V QL+ L + S+ VIF AGL+TSL+PC LS+LP+T+GYIG +
Sbjct: 3 ELWQTRLYELEQFANTLVSDQLTHLGWLSVGVIFTAGLLTSLTPCMLSMLPITVGYIGGY 62
Query: 152 GSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNL 211
++R + S F+LGLATTLA LG+ A+F G+ YGQ+G GLPL S +AI+MGLNL
Sbjct: 63 -EAENRWHAMRMSTWFALGLATTLATLGIVAAFLGQVYGQVGIGLPLIVSIVAILMGLNL 121
Query: 212 LEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSK 271
LE + LQLPS + + P +++YL GLTF + ASPCSTPVLATLL +VAT++
Sbjct: 122 LEALPLQLPSVGGL---EWISQDLPQGLRSYLIGLTFGVVASPCSTPVLATLLAWVATTQ 178
Query: 272 DPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFL 331
D ++G TLLL+YT GYV PL+LA +F A++ LL R++S WI P+SGALL+G G+++ L
Sbjct: 179 DLILGATLLLAYTVGYVVPLILAGTFTAAIKKLLELRRWSGWITPVSGALLVGFGVFSLL 238
Query: 332 DRL 334
R+
Sbjct: 239 SRI 241
>gi|307154386|ref|YP_003889770.1| cytochrome c biogenesis protein transmembrane region [Cyanothece
sp. PCC 7822]
gi|306984614|gb|ADN16495.1| cytochrome c biogenesis protein transmembrane region [Cyanothece
sp. PCC 7822]
Length = 244
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/237 (55%), Positives = 163/237 (68%), Gaps = 4/237 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q AN V GQLS LS S+ VIF AGLVTSL+PC LS+LP+T+ YIG + K R
Sbjct: 9 LYFLEQFANRVVSGQLSHLSLLSVGVIFLAGLVTSLTPCMLSMLPITIAYIGTY-QDKGR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S+ F LGLATTLA LG+ A+ G+ YGQIG GLP+ S +AIVMGLNLLE+I L
Sbjct: 68 LQSTIQSVWFCLGLATTLAALGIFAASLGRVYGQIGIGLPIFVSLIAIVMGLNLLEVISL 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
PS +FPS +++YL GLTF L ASPCSTPVLATLL +V +++D ++G
Sbjct: 128 PFPSIGAT---DWIKDDFPSGLRSYLLGLTFGLVASPCSTPVLATLLAWVVSTQDLILGA 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLLSYT GYV PL++A SF +L+ LL R++S WINP+SG LLL G+ + L RL
Sbjct: 185 GLLLSYTAGYVVPLMIAGSFTASLKRLLEMRRWSGWINPVSGVLLLSFGVISLLSRL 241
>gi|186685727|ref|YP_001868923.1| cytochrome C biogenesis protein, transmembrane region [Nostoc
punctiforme PCC 73102]
gi|186468179|gb|ACC83980.1| cytochrome c biogenesis protein, transmembrane region [Nostoc
punctiforme PCC 73102]
Length = 246
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 122/237 (51%), Positives = 169/237 (71%), Gaps = 4/237 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
+Y Q AN V QL+ LS S+ +IF AGL+TSL+PC LS+LP+T+GYIG + K+R
Sbjct: 9 IYQLEQFANSLVSNQLAHLSVVSVGIIFVAGLLTSLTPCMLSMLPITIGYIGGY-EAKNR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S F+LGLATTLA +G+ A+ GK YGQ+G GLP+ S +AI+MGLNLLE + L
Sbjct: 68 LQAAAQSTWFALGLATTLAGMGIIAALVGKVYGQVGIGLPIIVSIIAILMGLNLLEALPL 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
Q PS + + + P +++YL GLTF L ASPCSTPVLA+LLG++A ++D ++G
Sbjct: 128 QFPSLGET---NWISQDLPIGLRSYLLGLTFGLVASPCSTPVLASLLGWIANTQDLILGA 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLLSYT GYVAPL+LA +F +++ LL R++S WINP+SGALL+G G+++ + R+
Sbjct: 185 VLLLSYTAGYVAPLILAGTFTASIKKLLELRRWSGWINPVSGALLVGFGVFSLISRI 241
>gi|254411164|ref|ZP_05024941.1| Cytochrome C biogenesis protein transmembrane region
[Coleofasciculus chthonoplastes PCC 7420]
gi|196181665|gb|EDX76652.1| Cytochrome C biogenesis protein transmembrane region
[Coleofasciculus chthonoplastes PCC 7420]
Length = 246
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 126/239 (52%), Positives = 170/239 (71%), Gaps = 8/239 (3%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q A+ V QL+ LS S+ +IF AGL+TSL+PC LS+LP+T+GYIG + K R
Sbjct: 9 LYQLEQFADNLVGNQLTHLSALSIGIIFAAGLLTSLTPCMLSMLPITIGYIGGY-EAKGR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S F+LGLATTLA LG+ A+ G+ YGQ+G GLP+ S +AI+MGLNLLE + L
Sbjct: 68 LQAATQSTWFALGLATTLAGLGILAASVGRVYGQVGIGLPIIVSLIAIIMGLNLLEALPL 127
Query: 218 QLPSF--FDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLI 275
QLPSF + P + P +++YL GLTF L ASPCSTPVLATLL +VA+++D ++
Sbjct: 128 QLPSFGGMEWISP-----DLPKGIRSYLIGLTFGLVASPCSTPVLATLLAWVASTQDWVL 182
Query: 276 GGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
GG LLLSYT GYV PL++A +F +++ LL R++SSWI P+SGALL+G G+++ L R+
Sbjct: 183 GGVLLLSYTAGYVTPLIVAGTFTASIKKLLEVRQWSSWITPVSGALLVGFGVFSLLSRI 241
>gi|119492802|ref|ZP_01623888.1| Cytochrome c biogenesis protein, transmembrane region [Lyngbya sp.
PCC 8106]
gi|119452955|gb|EAW34127.1| Cytochrome c biogenesis protein, transmembrane region [Lyngbya sp.
PCC 8106]
Length = 245
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 125/239 (52%), Positives = 169/239 (70%), Gaps = 4/239 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q AN V QL+ LS+ S+ +I AGL+TSL+PC LS+LP+T+GYIG + + ++R
Sbjct: 9 LYEIAQYANTLVKTQLTQLSWVSVGIILLAGLLTSLTPCMLSMLPITIGYIGGYET-QNR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S F+LGLATTLA LG+ A+ G+ YGQIG GLP+ S +AI+MGLNLLE + +
Sbjct: 68 LQAAAQSTWFALGLATTLAGLGILATVVGQVYGQIGIGLPIIVSIVAILMGLNLLEALPI 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
LP+ D + N P+ V++Y GLTF L ASPCSTPVLATLL +V+TSKD ++GG
Sbjct: 128 PLPAL-DTME--WIPKNIPNGVRSYFLGLTFGLVASPCSTPVLATLLAWVSTSKDWVLGG 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFP 336
LL+Y GYVAPL+LA +F +++ LLS R++S WI P+SGALL+G G+++ L R P
Sbjct: 185 VFLLAYAAGYVAPLVLAGTFTASIKKLLSLRQWSGWITPVSGALLVGFGVFSLLSRFVP 243
>gi|119511757|ref|ZP_01630860.1| hypothetical protein N9414_15662 [Nodularia spumigena CCY9414]
gi|119463594|gb|EAW44528.1| hypothetical protein N9414_15662 [Nodularia spumigena CCY9414]
Length = 259
Score = 234 bits (597), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 168/239 (70%), Gaps = 5/239 (2%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q AN V QL+ LS S+ +IF AGL+TSL+PC LS+LP+T+GYIG + K R
Sbjct: 22 LYELEQFANTLVSNQLTHLSLLSIGIIFTAGLLTSLTPCMLSMLPITIGYIGGY-EAKGR 80
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S F+LGLATTLA +G+ A+F GK YGQ+G GLP+ S +AI+MGLNLLE + +
Sbjct: 81 LQAAAQSTWFALGLATTLAGMGIIAAFVGKVYGQVGIGLPIIVSIIAILMGLNLLEALPI 140
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
Q PS + + + P V++Y GLTF L ASPCSTPVLA+LLG+VA+++D ++G
Sbjct: 141 QFPSLGET---NWISQDLPPGVRSYSLGLTFGLVASPCSTPVLASLLGWVASTQDLILGA 197
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFP 336
LLLSYT GYVAPL+LA +F +++ LL R++S WINP+SG LL+ G+++ + R FP
Sbjct: 198 ILLLSYTAGYVAPLILAGTFTASIKKLLELRRWSGWINPVSGVLLVAFGVFSLISR-FP 255
>gi|359457402|ref|ZP_09245965.1| cytochrome c biogenesis protein transmembrane region [Acaryochloris
sp. CCMEE 5410]
Length = 245
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 123/241 (51%), Positives = 172/241 (71%), Gaps = 4/241 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q AN V QLS LS S+ +IF AGL+TSL+PCTLS+LP+T+GYIG + + ++R
Sbjct: 9 LYHLEQFANTIVSTQLSHLSALSVGIIFLAGLLTSLTPCTLSMLPITVGYIGGYET-ENR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q + S+ F LGLA+TLA LG+GA+ G+ YGQIG GL + S +AI+MGLNLLE + L
Sbjct: 68 WQAMAQSVWFCLGLASTLAGLGIGAALLGRVYGQIGVGLAIGVSLVAIIMGLNLLEALPL 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
+LPSF + P V+++L GLTF L ASPCSTPVLATLL ++++++DP++GG
Sbjct: 128 RLPSFSGV---ELISDQLPRGVRSFLLGLTFGLVASPCSTPVLATLLAWISSTQDPILGG 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFPT 337
LLLSYT GY APL++A +F A++ LS RK+S+WI P SG +L+ G+++ L+ + P+
Sbjct: 185 GLLLSYTAGYTAPLIIAGTFTAAIKRFLSIRKWSAWITPTSGVILVAFGVFSLLNHVLPS 244
Query: 338 T 338
Sbjct: 245 V 245
>gi|282896198|ref|ZP_06304221.1| Cytochrome c biogenesis protein, transmembrane region protein
[Raphidiopsis brookii D9]
gi|281198887|gb|EFA73765.1| Cytochrome c biogenesis protein, transmembrane region protein
[Raphidiopsis brookii D9]
Length = 244
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 130/237 (54%), Positives = 170/237 (71%), Gaps = 4/237 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
+Y Q AN V QL+ L+ TS+A+IF AGL+TSL+PC LS+LP+T+GYIG + K+R
Sbjct: 9 IYHLEQFANILVAQQLNHLTITSIAIIFLAGLLTSLTPCMLSMLPITIGYIGGY-EAKTR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S F+LGLATTLA LG+ A GK YGQ+G GLP+ S LAI+MGLNLLE + L
Sbjct: 68 LQAAAQSTWFALGLATTLAGLGILAGLVGKVYGQVGMGLPIIVSILAIIMGLNLLEALPL 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
Q PS+ + + + PS V++Y GLTF L ASPCSTPVLA+LLG+VA S+D L+G
Sbjct: 128 QFPSWGET---NWISNDMPSGVRSYFIGLTFGLVASPCSTPVLASLLGWVANSQDLLLGA 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLL+YT GYV PL+LA +F ++ LL FR++S WINP+SGALL+G G+++ L RL
Sbjct: 185 FLLLAYTAGYVTPLILAGTFTATIKKLLEFRRWSGWINPVSGALLVGFGVFSLLSRL 241
>gi|158334973|ref|YP_001516145.1| cytochrome c biogenesis protein, thiol reduction transmembrane
region, CcdA [Acaryochloris marina MBIC11017]
gi|158305214|gb|ABW26831.1| cytochrome c biogenesis protein, thiol reduction transmembrane
region, CcdA [Acaryochloris marina MBIC11017]
Length = 245
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/241 (50%), Positives = 172/241 (71%), Gaps = 4/241 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q AN V QLS LS S+ +IF AGL+TSL+PCTLS+LP+T+GYIG + + ++R
Sbjct: 9 LYHLEQFANSIVSTQLSHLSALSVGIIFLAGLLTSLTPCTLSMLPITVGYIGGYET-ENR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q + S+ F LGLA+TLA LG+GA+ G+ YGQIG GL + S +AI+MGLNLLE + L
Sbjct: 68 WQAMAQSVWFCLGLASTLAGLGIGAALLGRVYGQIGVGLAIVVSLVAIIMGLNLLEALPL 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
+LPSF + P ++++L GLTF L ASPCSTPVLATLL ++++++DP++GG
Sbjct: 128 RLPSFSGV---ELISDQLPRGLRSFLLGLTFGLVASPCSTPVLATLLAWISSTQDPILGG 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFPT 337
LLLSYT GY APL++A +F A++ LS RK+S+WI P SG +L+ G+++ L+ + P+
Sbjct: 185 GLLLSYTAGYTAPLIIAGTFTAAIKRFLSIRKWSAWITPTSGVILVAFGVFSLLNHVLPS 244
Query: 338 T 338
Sbjct: 245 V 245
>gi|298492182|ref|YP_003722359.1| cytochrome c biogenesis protein transmembrane region ['Nostoc
azollae' 0708]
gi|298234100|gb|ADI65236.1| cytochrome c biogenesis protein transmembrane region ['Nostoc
azollae' 0708]
Length = 249
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/237 (52%), Positives = 167/237 (70%), Gaps = 4/237 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
+Y Q AN V QL+ +S S+A+IF AGL+TSL+PC LS+LP+T+GYIG + KSR
Sbjct: 12 IYQLEQFANTLVANQLTHVSIVSIAIIFAAGLLTSLTPCMLSMLPITIGYIGGY-EAKSR 70
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S F+LGLATTLA LG+ A GK YGQ+G GLP+ S +AI+MGLNLLE + +
Sbjct: 71 LQAAAQSTWFALGLATTLAGLGIVAGLVGKVYGQVGIGLPIIVSIIAIIMGLNLLEALPI 130
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
Q PS + + + P V++Y GLTF L ASPCSTPVLA+LLG+VA ++D ++G
Sbjct: 131 QFPSLNET---NCISQDLPPRVRSYSIGLTFGLVASPCSTPVLASLLGWVANTQDLILGA 187
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLLSYT GYVAPL+LA +F ++ LL R++S WINP+SGALL+G G+++ L R+
Sbjct: 188 VLLLSYTAGYVAPLILAGTFTATIRKLLELRRWSGWINPVSGALLVGFGVFSLLSRI 244
>gi|67922270|ref|ZP_00515783.1| Cytochrome c biogenesis protein, transmembrane region [Crocosphaera
watsonii WH 8501]
gi|416389919|ref|ZP_11685419.1| putative c-type cytochrome biogenesis protein [Crocosphaera
watsonii WH 0003]
gi|67855846|gb|EAM51092.1| Cytochrome c biogenesis protein, transmembrane region [Crocosphaera
watsonii WH 8501]
gi|357264150|gb|EHJ13075.1| putative c-type cytochrome biogenesis protein [Crocosphaera
watsonii WH 0003]
Length = 247
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 126/237 (53%), Positives = 163/237 (68%), Gaps = 4/237 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
+Y Q AN V QL L F S+A+IF AGL+TSL+PC LS+LP+T+ YIG + S + +
Sbjct: 9 IYHLQQFANRLVSLQLDHLGFVSIAIIFLAGLLTSLTPCMLSMLPITIAYIGGYES-QGK 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q + S FSLGLATTLA LG+ A+ GK YGQIG GLP+ S +AI+MGLNLLE+I
Sbjct: 68 LQGMRQSAWFSLGLATTLAGLGILAASLGKVYGQIGVGLPIVVSIIAILMGLNLLEVISF 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
Q PS + P +V++Y GLTF L ASPCSTPVLATLL +VAT +D ++GG
Sbjct: 128 QFPSLGET---NWITEELPPAVRSYSLGLTFGLVASPCSTPVLATLLAWVATKQDLILGG 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLL+YT GYV PL+LA +F L+ LL R++SSWINP+SG L+ G+++ L RL
Sbjct: 185 VLLLAYTVGYVLPLILAGTFTATLKKLLELRRWSSWINPVSGVSLIVFGMFSLLSRL 241
>gi|440680481|ref|YP_007155276.1| cytochrome c biogenesis protein transmembrane region [Anabaena
cylindrica PCC 7122]
gi|428677600|gb|AFZ56366.1| cytochrome c biogenesis protein transmembrane region [Anabaena
cylindrica PCC 7122]
Length = 246
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 167/237 (70%), Gaps = 4/237 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
+Y Q AN V QL+ LS S+ +IF AGL+TSL+PC LS+LP+T+GYIG + KSR
Sbjct: 9 IYELEQFANTLVANQLTHLSVVSIGIIFAAGLLTSLTPCMLSMLPITIGYIGGY-EAKSR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S F+LGLATTLA +G+ A GK YGQ+G GLP+ S +AI+MGLNLLE + +
Sbjct: 68 LQAAAQSTWFALGLATTLAGMGIVAGLVGKVYGQVGIGLPIIVSIIAIIMGLNLLEALPI 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
Q PS + + + P V++Y GLTF L ASPCSTPVLA+LLG+VA ++D ++G
Sbjct: 128 QFPSLNET---NWISQDLPPGVRSYCIGLTFGLVASPCSTPVLASLLGWVANTQDLILGA 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLLSYT GYVAPL+LA +F +++ LL R++S WINP+SGALL+G G+++ + R+
Sbjct: 185 VLLLSYTAGYVAPLILAGTFTASIKKLLELRRWSGWINPISGALLVGFGVFSLISRI 241
>gi|282901425|ref|ZP_06309350.1| Cytochrome c biogenesis protein, transmembrane region protein
[Cylindrospermopsis raciborskii CS-505]
gi|281193704|gb|EFA68676.1| Cytochrome c biogenesis protein, transmembrane region protein
[Cylindrospermopsis raciborskii CS-505]
Length = 246
Score = 230 bits (586), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 130/237 (54%), Positives = 169/237 (71%), Gaps = 4/237 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
+Y Q AN V QLS L+ S+A+IF AGL+TSL+PC LS+LP+T+GYIG + KSR
Sbjct: 9 IYHLEQFANILVAQQLSHLTIISIAIIFLAGLLTSLTPCMLSMLPITIGYIGGY-EAKSR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S F+LGLATTLA LG+ A GK YGQ+G GLP+ S LAI+MGLNLLE + L
Sbjct: 68 LQAAAQSTWFALGLATTLAGLGILAGLIGKVYGQVGMGLPIIVSILAIIMGLNLLEALPL 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
Q PS+ + + + PS V++Y GLTF L ASPCSTPVL +LLG+VA S+D L+GG
Sbjct: 128 QFPSWGET---NWISNDMPSGVRSYCIGLTFGLVASPCSTPVLVSLLGWVANSQDFLLGG 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLL+YT GYV PL+LA +F +++ LL FR++S WINP+SG LL+G G+++ L RL
Sbjct: 185 FLLLAYTAGYVTPLILAGTFTASIKKLLEFRQWSGWINPVSGVLLVGFGVFSLLSRL 241
>gi|443313477|ref|ZP_21043088.1| cytochrome c biogenesis protein [Synechocystis sp. PCC 7509]
gi|442776420|gb|ELR86702.1| cytochrome c biogenesis protein [Synechocystis sp. PCC 7509]
Length = 242
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/238 (52%), Positives = 174/238 (73%), Gaps = 4/238 (1%)
Query: 97 FLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS 156
++Y AN V QL+ L+FTS+A+IF AGL+TSL+PC LS+LP+T+GYIG + + K+
Sbjct: 4 YIYELEHFANNLVTSQLTHLNFTSIAIIFIAGLLTSLTPCMLSMLPITIGYIGGYET-KN 62
Query: 157 RAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIE 216
R Q S F+LGLATTLA LG+ A+F GK YGQ+G GLP+ S +AI+MGLNLLE +
Sbjct: 63 RLQAAIASTWFALGLATTLAALGIVAAFVGKVYGQVGIGLPIIVSIIAILMGLNLLEALP 122
Query: 217 LQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIG 276
L+LPSF + + P +++YL GLTF + ASPCSTPVLATLL ++A++ D ++G
Sbjct: 123 LKLPSFGGM---NWISKDLPPGLRSYLIGLTFGVVASPCSTPVLATLLAWIASTHDLVLG 179
Query: 277 GTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLL+YT GYVAPL+LA +F A+++LL R++S WI P+SGA+L+G G+++ L RL
Sbjct: 180 AGLLLAYTAGYVAPLILAGTFTAAIKNLLELRRWSGWITPVSGAILVGFGVFSLLVRL 237
>gi|77552968|gb|ABA95764.1| Cytochrome C biogenesis protein transmembrane region containing
protein, expressed [Oryza sativa Japonica Group]
Length = 245
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 153/205 (74%), Gaps = 13/205 (6%)
Query: 30 GVSVHKSHSVAKKSIR---------C---FSTNTFLSTLTVANLAAIGNAKALTMENVLE 77
GV + SV+K +IR C L+T+ V +L A G A A + + L
Sbjct: 39 GVPRERGSSVSKAAIRGARLEAAARCSLVRQRPMLLATVAVGSLVAAGAANATEIGDSLL 98
Query: 78 GAASVYTMADGSLGDMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCT 137
G++ + +AD S+GD FG LYSAGQQANEAV QLSALSFTSLAVIFGAGLVTSLSPCT
Sbjct: 99 GSSGL-ALADLSIGDWFGNLLYSAGQQANEAVQDQLSALSFTSLAVIFGAGLVTSLSPCT 157
Query: 138 LSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLP 197
LSVLPLTLGYIGAFGSGK R++++G+S+AFSLGLATTLA+LGV ASFAGKAYGQ+G GLP
Sbjct: 158 LSVLPLTLGYIGAFGSGKDRSEVVGNSVAFSLGLATTLAILGVAASFAGKAYGQVGQGLP 217
Query: 198 LAASGLAIVMGLNLLEIIELQLPSF 222
+AASGLA++MGLNLLE+ + LP
Sbjct: 218 VAASGLAVIMGLNLLEVYKHTLPDL 242
>gi|428773460|ref|YP_007165248.1| cytochrome c biogenesis protein transmembrane region
[Cyanobacterium stanieri PCC 7202]
gi|428687739|gb|AFZ47599.1| cytochrome c biogenesis protein transmembrane region
[Cyanobacterium stanieri PCC 7202]
Length = 251
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 132/237 (55%), Positives = 167/237 (70%), Gaps = 4/237 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q ANE V QLS L+ S+ +I GL+TSL+PC LS+LPLT+ YIG + S + R
Sbjct: 10 LYYLQQFANELVNSQLSHLTVFSVGIILLTGLLTSLTPCMLSMLPLTIAYIGGYQS-RGR 68
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
SI F+LGLATTLA+LGVGA+ GK YGQIG GLP+ S +AI+MGLNLLEII L
Sbjct: 69 LSSFFQSIYFALGLATTLAILGVGAAVFGKVYGQIGVGLPILVSAIAIIMGLNLLEIIPL 128
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
+LPS+ N D A N P S+++YL G+TF L ASPCSTPVL TLL Y+A +++ L+G
Sbjct: 129 KLPSW-GNTD--WVAENIPDSLRSYLLGVTFGLVASPCSTPVLITLLAYIANTQNILLGT 185
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLSY GYV+PL+LA +F G L+ LLS R + WINP+SGA+LLG G+ + RL
Sbjct: 186 VFLLSYALGYVSPLILAGTFTGTLKKLLSLRMVTQWINPISGAILLGFGVISLASRL 242
>gi|428225796|ref|YP_007109893.1| cytochrome c biogenesis protein transmembrane region [Geitlerinema
sp. PCC 7407]
gi|427985697|gb|AFY66841.1| cytochrome c biogenesis protein transmembrane region [Geitlerinema
sp. PCC 7407]
Length = 246
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 130/239 (54%), Positives = 174/239 (72%), Gaps = 4/239 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY + AN V QL L+ S+ +IF AGL+TSL+PC LS+LP+T+GYIG + ++R
Sbjct: 8 LYHLERFANGLVSEQLLHLTPLSIGIIFAAGLLTSLTPCMLSMLPITIGYIGGY-EAQTR 66
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S+ FSLGLATTLA LG+ A+ G+ YGQ+G GLP+ S LAI+MGLNLLE + L
Sbjct: 67 WQAAAQSLWFSLGLATTLAGLGILAAVLGRVYGQVGLGLPIVVSVLAILMGLNLLEALPL 126
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
LPSF + +P SVQ+YL GLTF L ASPCSTPVLATLLG+++T++DP++GG
Sbjct: 127 PLPSFTGE---GLISKEWPRSVQSYLVGLTFGLVASPCSTPVLATLLGWISTTQDPVLGG 183
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFP 336
TLL+SYT GYV+PL+LA +F A++ LL R++S+W+ P SGALL+G G+++ L RL P
Sbjct: 184 TLLISYTAGYVSPLILAGTFTAAIKKLLELRQWSAWVTPTSGALLVGFGVFSLLSRLLP 242
>gi|209527571|ref|ZP_03276072.1| cytochrome c biogenesis protein transmembrane region [Arthrospira
maxima CS-328]
gi|376006342|ref|ZP_09783623.1| conserved membrane hypothetical protein [Arthrospira sp. PCC 8005]
gi|423064708|ref|ZP_17053498.1| cytochrome c biogenesis protein transmembrane region [Arthrospira
platensis C1]
gi|209491994|gb|EDZ92348.1| cytochrome c biogenesis protein transmembrane region [Arthrospira
maxima CS-328]
gi|375325233|emb|CCE19376.1| conserved membrane hypothetical protein [Arthrospira sp. PCC 8005]
gi|406713951|gb|EKD09119.1| cytochrome c biogenesis protein transmembrane region [Arthrospira
platensis C1]
Length = 245
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/240 (51%), Positives = 165/240 (68%), Gaps = 6/240 (2%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q AN V QL+ L + S+ ++ AGL+TSL+PC LS+LP+T+ YIG + ++R
Sbjct: 9 LYEIAQFANTLVREQLTHLGWPSVLILLAAGLLTSLTPCMLSMLPITIAYIGGY-ENQNR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
S F+LGLATTLA LG+ AS G+ YGQIG GLP+ S +AI+MGLNLL+ + L
Sbjct: 68 TTAAIQSTWFALGLATTLAGLGIFASLVGQVYGQIGWGLPILVSAIAILMGLNLLDALPL 127
Query: 218 QLPSFFD-NFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIG 276
QLP+F + P N P S ++YL GLTF L ASPCSTPVLAT+L +V+T+ D L+G
Sbjct: 128 QLPAFDTMGWIPE----NLPHSARSYLLGLTFGLVASPCSTPVLATILAWVSTTGDILLG 183
Query: 277 GTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFP 336
G LLLSY GYVAPL++A +F ++ LL+ R++S WI P SG LL+G G+++ L RL P
Sbjct: 184 GVLLLSYAVGYVAPLIVAGTFTATIKRLLALRQWSGWITPASGVLLVGFGVFSLLSRLAP 243
>gi|411118909|ref|ZP_11391289.1| cytochrome c biogenesis protein [Oscillatoriales cyanobacterium
JSC-12]
gi|410710772|gb|EKQ68279.1| cytochrome c biogenesis protein [Oscillatoriales cyanobacterium
JSC-12]
Length = 244
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/236 (51%), Positives = 164/236 (69%), Gaps = 4/236 (1%)
Query: 99 YSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRA 158
Y Q AN V QLS L+ S+ +IF AGL+TSL+PC LS+LP+T+GYIG + + K+R
Sbjct: 10 YQLAQFANHLVSIQLSHLTPISIGIIFLAGLLTSLTPCMLSMLPITIGYIGGYET-KTRL 68
Query: 159 QIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQ 218
Q S F+LGLATTLA LG+ A+ GK YGQIG GLP+ S +AI+MGLNLLE + ++
Sbjct: 69 QAAIQSTWFALGLATTLAALGILAAVVGKIYGQIGIGLPVIVSLIAILMGLNLLEALPIR 128
Query: 219 LPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGT 278
LPS+ D + P ++YL GLTF L ASPCSTPVLATLL +++ ++DP++GG
Sbjct: 129 LPSY-GGLD--WISKELPEGTRSYLLGLTFGLVASPCSTPVLATLLAWISATQDPVLGGA 185
Query: 279 LLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLL YT GYV PL+LA +F ++ +L R++S WI P SG LL+G GL++ L R+
Sbjct: 186 LLLLYTAGYVVPLILAGTFTALIKKMLEVRRWSGWITPASGVLLIGFGLFSLLSRV 241
>gi|428777945|ref|YP_007169732.1| cytochrome c biogenesis protein transmembrane region [Halothece sp.
PCC 7418]
gi|428692224|gb|AFZ45518.1| cytochrome c biogenesis protein transmembrane region [Halothece sp.
PCC 7418]
Length = 246
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/238 (52%), Positives = 169/238 (71%), Gaps = 4/238 (1%)
Query: 97 FLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS 156
F Y Q A++ V QL+ LS S+ +IF AGL+TSL+PC LS+LP+T+GYIG+ +
Sbjct: 8 FFYQLQQFADQLVSQQLNHLSPVSVGLIFLAGLLTSLTPCMLSMLPITVGYIGS-SDTEG 66
Query: 157 RAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIE 216
RA + S F+LGLATTLA LG+ A+ G+ YGQIG GLP+ S +AI+MGLNLLEI+
Sbjct: 67 RADALWKSSWFALGLATTLAGLGIFAAAFGQVYGQIGVGLPIFVSAIAILMGLNLLEIVP 126
Query: 217 LQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIG 276
L+ PS +FP SV++YL GLTF L ASPCSTPVLA+LL +VA+S+D ++G
Sbjct: 127 LRFPSLGGT---DWIKEDFPPSVRSYLLGLTFGLVASPCSTPVLASLLAWVASSQDLVLG 183
Query: 277 GTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLLSYT GYV PL++A +F +++ L FR++ +WI P+SGALLLG G+++ L RL
Sbjct: 184 AGLLLSYTGGYVMPLVIAGTFTASIKKFLEFRRWGNWITPISGALLLGFGVFSLLLRL 241
>gi|428780074|ref|YP_007171860.1| cytochrome c biogenesis protein [Dactylococcopsis salina PCC 8305]
gi|428694353|gb|AFZ50503.1| cytochrome c biogenesis protein [Dactylococcopsis salina PCC 8305]
Length = 246
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 122/230 (53%), Positives = 166/230 (72%), Gaps = 4/230 (1%)
Query: 105 ANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDS 164
A++ V QL+ LS S+ +IF AGL+TSL+PC LS+LP+T+GYIGA + R + S
Sbjct: 16 ADQLVSQQLNQLSPVSVGIIFVAGLLTSLTPCMLSMLPITVGYIGA-SETEGRKDALWKS 74
Query: 165 IAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFD 224
F+LGLATTLA LGV A+ G+ YGQ+G GLP+ S +AI+MGLNLLEII L+ PSF
Sbjct: 75 SWFALGLATTLAGLGVFAAGFGQVYGQVGVGLPIIVSAIAILMGLNLLEIIPLRFPSFGG 134
Query: 225 NFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYT 284
+ +FP S+++YL GLTF L ASPCSTPVLA+LL +VA+S+D ++G LLLSYT
Sbjct: 135 T---QWIKDDFPPSIRSYLLGLTFGLVASPCSTPVLASLLAWVASSQDLILGAGLLLSYT 191
Query: 285 TGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
GYV PL++A F +++ L FR++ +WI P+SGALL+G G+++ L RL
Sbjct: 192 AGYVTPLVIAGIFTASIKKFLEFRRWGTWITPISGALLIGFGVFSLLLRL 241
>gi|172039044|ref|YP_001805545.1| c-type cytochrome biogenesis protein [Cyanothece sp. ATCC 51142]
gi|354552671|ref|ZP_08971979.1| cytochrome c biogenesis protein transmembrane region [Cyanothece
sp. ATCC 51472]
gi|171700498|gb|ACB53479.1| probable c-type cytochrome biogenesis protein [Cyanothece sp. ATCC
51142]
gi|353555993|gb|EHC25381.1| cytochrome c biogenesis protein transmembrane region [Cyanothece
sp. ATCC 51472]
Length = 247
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/237 (53%), Positives = 167/237 (70%), Gaps = 4/237 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q AN V +L LSF S+A+IF AGL+TSL+PC LS+LP+T+ YIG + S + +
Sbjct: 9 LYHLQQFANRLVSLELDHLSFISIAIIFLAGLLTSLTPCMLSMLPITIAYIGGYES-QGK 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q + S FSLGLATTLA LG+ A+ GK YGQIG GLP+ S +AI+MGLNLLE+I
Sbjct: 68 LQGMRQSAWFSLGLATTLAGLGILAASLGKVYGQIGVGLPIVVSIVAILMGLNLLEVISF 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
Q PS + + +FP +++Y GLTF L ASPCSTPVLATLLG+VAT +D ++GG
Sbjct: 128 QFPSLGET---NWISDDFPPGIRSYSLGLTFGLVASPCSTPVLATLLGWVATQQDLILGG 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLL+YT GYV PL+LA +F L+ LL R++S+WINP+SG L+ G+++ L RL
Sbjct: 185 ALLLAYTVGYVLPLILAGTFTATLKKLLELRRWSTWINPVSGVFLIVFGMFSLLSRL 241
>gi|427713219|ref|YP_007061843.1| cytochrome c biogenesis protein [Synechococcus sp. PCC 6312]
gi|427377348|gb|AFY61300.1| cytochrome c biogenesis protein [Synechococcus sp. PCC 6312]
Length = 244
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/250 (46%), Positives = 174/250 (69%), Gaps = 12/250 (4%)
Query: 89 SLGDMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYI 148
S+ ++F Y+ Q AN+ V+ QL+ L+ S+A+IF AGL+TSL+PCTLS+LP+T+GYI
Sbjct: 3 SVQELF----YALEQWANQIVVAQLTDLNPVSIAIIFMAGLLTSLTPCTLSMLPITIGYI 58
Query: 149 GAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMG 208
G + + ++R Q S F+LGLATTLA+LG+ A+ AGK YGQ+G GL + S +AI+MG
Sbjct: 59 GGY-NAENRLQAAKQSAWFALGLATTLAILGIIAALAGKIYGQVGPGLTIVVSLVAIIMG 117
Query: 209 LNLLEIIELQLPSF--FDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGY 266
LNLL + + LP++ + R P +++Y+ G +F L A+PCSTPVLATLL +
Sbjct: 118 LNLLNALPITLPTWPGLEELPERV-----PKGLRSYVLGASFGLVAAPCSTPVLATLLAW 172
Query: 267 VATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGG 326
VA ++ P++G LLL+YT GYV PL++A +F +++ LL+ R++S+WI P SG LL+G G
Sbjct: 173 VAANQKPVVGAGLLLAYTVGYVLPLIIAGTFTASIKKLLALRQWSAWITPASGVLLVGFG 232
Query: 327 LYTFLDRLFP 336
+ + RL P
Sbjct: 233 VVSLAVRLLP 242
>gi|218248802|ref|YP_002374173.1| cytochrome c biogenesis protein transmembrane region [Cyanothece
sp. PCC 8801]
gi|218169280|gb|ACK68017.1| cytochrome c biogenesis protein transmembrane region [Cyanothece
sp. PCC 8801]
Length = 246
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 129/243 (53%), Positives = 169/243 (69%), Gaps = 4/243 (1%)
Query: 92 DMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAF 151
+ F LY Q AN+ V QLS LS+ SL++IF AGL+TSL+PC LS+LP+T+ YIG +
Sbjct: 3 ESFQTQLYQLEQFANQLVSFQLSHLSWLSLSIIFSAGLLTSLTPCMLSMLPITIAYIGGY 62
Query: 152 GSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNL 211
+ R Q S F+LGLATTLA LG+ A+ GK YGQIG GLP+ S +AI+MGLNL
Sbjct: 63 -QAQGRRQAALQSTWFALGLATTLAGLGILAASLGKIYGQIGLGLPIFVSIIAILMGLNL 121
Query: 212 LEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSK 271
LE+I LQ PS P +++YL GLTF L ASPCSTPVLATLL +VAT++
Sbjct: 122 LELISLQFPSLGAT---NWITEELPPGIRSYLLGLTFGLIASPCSTPVLATLLAWVATTQ 178
Query: 272 DPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFL 331
D ++G LLLSYT GYV PL++A +F +L+ LL R++S+WINP+SG LL+G G+++ L
Sbjct: 179 DLMLGAALLLSYTAGYVTPLIVAGTFTASLKKLLELRRWSAWINPVSGVLLIGFGVFSLL 238
Query: 332 DRL 334
RL
Sbjct: 239 SRL 241
>gi|257061861|ref|YP_003139749.1| cytochrome c biogenesis protein transmembrane region [Cyanothece
sp. PCC 8802]
gi|256592027|gb|ACV02914.1| cytochrome c biogenesis protein transmembrane region [Cyanothece
sp. PCC 8802]
Length = 246
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 129/243 (53%), Positives = 169/243 (69%), Gaps = 4/243 (1%)
Query: 92 DMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAF 151
+ F LY Q AN+ V QLS LS+ SL++IF AGL+TSL+PC LS+LP+T+ YIG +
Sbjct: 3 ESFQTQLYHLEQFANQLVSFQLSHLSWLSLSIIFSAGLLTSLTPCMLSMLPITIAYIGGY 62
Query: 152 GSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNL 211
+ R Q S F+LGLATTLA LG+ A+ GK YGQIG GLP+ S +AI+MGLNL
Sbjct: 63 -QAQGRRQAALQSTWFALGLATTLAGLGILAASLGKIYGQIGLGLPIFVSIIAILMGLNL 121
Query: 212 LEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSK 271
LE+I LQ PS P +++YL GLTF L ASPCSTPVLATLL +VAT++
Sbjct: 122 LELISLQFPSLGAT---NWITEELPPGIRSYLLGLTFGLIASPCSTPVLATLLAWVATTQ 178
Query: 272 DPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFL 331
D ++G LLLSYT GYV PL++A +F +L+ LL R++S+WINP+SG LL+G G+++ L
Sbjct: 179 DLMLGAALLLSYTAGYVTPLIVAGTFTASLKKLLELRRWSAWINPVSGVLLIGFGVFSLL 238
Query: 332 DRL 334
RL
Sbjct: 239 SRL 241
>gi|254423423|ref|ZP_05037141.1| Cytochrome C biogenesis protein transmembrane region [Synechococcus
sp. PCC 7335]
gi|196190912|gb|EDX85876.1| Cytochrome C biogenesis protein transmembrane region [Synechococcus
sp. PCC 7335]
Length = 254
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 126/240 (52%), Positives = 166/240 (69%), Gaps = 3/240 (1%)
Query: 97 FLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS 156
FLY Q AN V QL LS S+ +I AGL+TSL+PC LS+LP+T+GY+G++ S KS
Sbjct: 16 FLYHLSQAANGWVEAQLGHLSLASIGIIAVAGLLTSLTPCMLSMLPITVGYMGSYES-KS 74
Query: 157 RAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIE 216
R Q +G S+ F++GLATTLA LG+ AS G YGQ+G GLP+ S +AI+MGLNLLE +
Sbjct: 75 RWQSVGQSVWFAVGLATTLAGLGLAASSLGWVYGQVGVGLPIVVSMIAILMGLNLLEALP 134
Query: 217 LQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIG 276
L F+ D + P SV++YL GLTF L ASPCSTPVLATLL +V DP++G
Sbjct: 135 LPPLPSFN--DTEFLQNDIPRSVKSYLLGLTFGLVASPCSTPVLATLLAWVGEKGDPVLG 192
Query: 277 GTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFP 336
+LLL+YT GYVAPL+LA F +++ +L R++S WI P SG LL+G GL++ + RL P
Sbjct: 193 ASLLLAYTIGYVAPLMLAGIFTASIKRILEIRRWSGWITPASGVLLVGFGLFSLVTRLLP 252
>gi|414075503|ref|YP_006994821.1| cytochrome C biogenesis protein [Anabaena sp. 90]
gi|413968919|gb|AFW93008.1| cytochrome C biogenesis protein [Anabaena sp. 90]
Length = 246
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 124/237 (52%), Positives = 167/237 (70%), Gaps = 4/237 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
+Y Q AN V QL+ LSF S+A+IF AGL+TSL+PC LS+LP+T+GYIG + K+R
Sbjct: 9 IYQLEQFANTLVANQLTHLSFVSIAIIFAAGLLTSLTPCMLSMLPITIGYIGGY-EAKTR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S F+LGLATTLA +G+ A GK YGQIG GLP+ S +AI+MGLNLLE + +
Sbjct: 68 LQAAAQSTWFALGLATTLAGMGIVAGLVGKVYGQIGIGLPIIVSIIAIIMGLNLLEALPI 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
Q PS + + + P V++Y GLTF L ASPCSTPVLA+LLG+VA ++D ++G
Sbjct: 128 QFPSLNET---NWISQDLPPGVRSYSIGLTFGLVASPCSTPVLASLLGWVANTQDLVLGA 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLL+YT GYV PL+LA +F A++ LL R++S WINP+SG LL+G G+++ L R+
Sbjct: 185 VLLLAYTAGYVTPLILAGTFTAAIKKLLELRRWSGWINPISGVLLVGFGVFSLLSRI 241
>gi|428310703|ref|YP_007121680.1| cytochrome c biogenesis protein [Microcoleus sp. PCC 7113]
gi|428252315|gb|AFZ18274.1| cytochrome c biogenesis protein [Microcoleus sp. PCC 7113]
Length = 246
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 128/237 (54%), Positives = 170/237 (71%), Gaps = 4/237 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q A+ V QL+ L+ S+ +IF AGL+TSL+PC LS+LP+TLGYIG + K R
Sbjct: 9 LYELEQFADNLVSTQLAHLTGFSIGIIFLAGLLTSLTPCMLSMLPITLGYIGGY-EAKGR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S F+LGLATTLA LG+ A+ G+ YGQIG GLP+ S +AI+MGLNLLE + L
Sbjct: 68 LQAATQSTWFALGLATTLAGLGILAASVGRVYGQIGVGLPIIVSLIAIIMGLNLLEALPL 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
QLPS+ D + ++P V++YL GLTF L ASPCSTPVLATLL +VA ++D ++GG
Sbjct: 128 QLPSW-GGMD--WISQDWPVGVRSYLIGLTFGLVASPCSTPVLATLLAWVAKTQDLVLGG 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLLSYT GYVAPL+LA +F +++ LL R++SSWI P+SGALL+ G+++ L R+
Sbjct: 185 GLLLSYTAGYVAPLILAGTFTASIKKLLELRQWSSWITPVSGALLVAFGVFSLLSRI 241
>gi|434389383|ref|YP_007099994.1| cytochrome c biogenesis protein [Chamaesiphon minutus PCC 6605]
gi|428020373|gb|AFY96467.1| cytochrome c biogenesis protein [Chamaesiphon minutus PCC 6605]
Length = 245
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/238 (50%), Positives = 166/238 (69%), Gaps = 6/238 (2%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY A+ V QL+ +++ S+A IF AGL+TSL+PCTLS+LP+T+GYIG + KSR
Sbjct: 10 LYQLEHFADRLVTEQLTQITWVSIATIFLAGLLTSLTPCTLSMLPITIGYIGGY-EYKSR 68
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S F +G+ATTLA LG+ A+ GK YGQIG GLP+ S +AI+MGLNLLE +
Sbjct: 69 WQAALQSTFFCVGIATTLAGLGIFAAVVGKVYGQIGLGLPIFVSVVAILMGLNLLEALPF 128
Query: 218 QLPSFFD-NFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIG 276
QLP F ++ P+ + P+ +++YL G+TF L ASPCSTPVLA+LL +VA++ + +G
Sbjct: 129 QLPDFGGMDWIPK----DLPNGLRSYLLGVTFGLVASPCSTPVLASLLAWVASTGNIWLG 184
Query: 277 GTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLL+YT GYVAPL+LA +F ++ LL RK+S WI P SG LL+G G+++ L R+
Sbjct: 185 AGLLLAYTAGYVAPLILAGTFTAVIKKLLEVRKWSGWITPTSGILLIGFGVFSLLTRI 242
>gi|409993484|ref|ZP_11276623.1| cytochrome c biogenesis protein transmembrane region [Arthrospira
platensis str. Paraca]
gi|291566360|dbj|BAI88632.1| putative c-type cytochrome biogenesis protein CcdA [Arthrospira
platensis NIES-39]
gi|409935632|gb|EKN77157.1| cytochrome c biogenesis protein transmembrane region [Arthrospira
platensis str. Paraca]
Length = 245
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 125/239 (52%), Positives = 164/239 (68%), Gaps = 4/239 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q AN V QL+ + + S+ ++ AGL+TSL+PC LS+LP+T+GYIG + ++R
Sbjct: 9 LYEIAQFANTLVREQLTHVGWPSILILLAAGLLTSLTPCMLSMLPITIGYIGGY-ENQNR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
S F+LGLATTLA LGV AS G+ YGQIG GLP+ S +AI+MGLNLLE + L
Sbjct: 68 TTAAIQSTWFALGLATTLAGLGVFASLVGQVYGQIGWGLPIVVSAIAILMGLNLLEALPL 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
QLP+F D P S ++YL GLTF L ASPCSTPVLAT+L +V+T+ D L+GG
Sbjct: 128 QLPAF-DTMG--WIPEKLPHSARSYLLGLTFGLVASPCSTPVLATILAWVSTTGDVLLGG 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFP 336
LLLSY GYVAPL+LA +F ++ LL+ R++S WI P SG LL+G G+++ L RL P
Sbjct: 185 ALLLSYAVGYVAPLILAGTFTATIKRLLALRQWSGWITPASGVLLVGFGVFSLLYRLAP 243
>gi|427726239|ref|YP_007073516.1| cytochrome c biogenesis protein transmembrane region [Leptolyngbya
sp. PCC 7376]
gi|427357959|gb|AFY40682.1| cytochrome c biogenesis protein transmembrane region [Leptolyngbya
sp. PCC 7376]
Length = 246
Score = 217 bits (552), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 126/229 (55%), Positives = 167/229 (72%), Gaps = 4/229 (1%)
Query: 106 NEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSI 165
+ V QL+ S S+ ++FGAGL+TSL+PCTLS+LP+T+GYIG K+R+Q I S+
Sbjct: 17 DRLVDQQLTHWSVLSIFLVFGAGLLTSLTPCTLSMLPITIGYIGG-AEEKTRSQTIFQSL 75
Query: 166 AFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDN 225
F++GLATTLA LG+ A+ G+ YGQIG GLP+ S +AIVMGLNLLEII++Q PS
Sbjct: 76 WFTVGLATTLAALGIVAAGFGQIYGQIGIGLPIVVSAIAIVMGLNLLEIIQIQFPSIGAT 135
Query: 226 FDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTT 285
+ P V+AYL GLTF L ASPCSTPVLATLL +V+T+ D ++GG LLL+YT
Sbjct: 136 ---DWITNDLPQGVRAYLVGLTFGLVASPCSTPVLATLLAWVSTTHDLVLGGGLLLAYTL 192
Query: 286 GYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
GYV P+L+A F +L+ LLS R++S WINP+SGALL+G G+++ L RL
Sbjct: 193 GYVMPVLIAGIFTASLKKLLSLRQWSGWINPVSGALLVGFGIFSLLIRL 241
>gi|126657287|ref|ZP_01728453.1| hypothetical protein CY0110_25201 [Cyanothece sp. CCY0110]
gi|126621558|gb|EAZ92269.1| hypothetical protein CY0110_25201 [Cyanothece sp. CCY0110]
Length = 247
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 122/237 (51%), Positives = 165/237 (69%), Gaps = 4/237 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q AN+ V +L LS S+ +IF AGL+TSL+PC LS+LP+T+ YIG + S + +
Sbjct: 9 LYHLQQFANKLVSLELEHLSLISITIIFFAGLLTSLTPCMLSMLPITIAYIGGYES-QGK 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q + S+ FS GLATTLA LG+ A+ GK YGQIG GLP+ S +AI+MGLNLL++I
Sbjct: 68 LQGMRQSVWFSFGLATTLAGLGILAASLGKVYGQIGLGLPIIVSFIAILMGLNLLDVISF 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
Q PS + + + P +++Y GLTF L ASPCSTPVLATLLG+VAT +D ++GG
Sbjct: 128 QFPSLGET---NWISDDLPPGIRSYSLGLTFGLVASPCSTPVLATLLGWVATKQDLILGG 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLL+YT GYV PL+LA +F L+ LL R++S+WINP+SG L+ G+++ L RL
Sbjct: 185 ILLLAYTVGYVLPLILAGTFTATLKKLLELRRWSTWINPVSGFFLIVFGMFSLLSRL 241
>gi|427417924|ref|ZP_18908107.1| cytochrome c biogenesis protein [Leptolyngbya sp. PCC 7375]
gi|425760637|gb|EKV01490.1| cytochrome c biogenesis protein [Leptolyngbya sp. PCC 7375]
Length = 246
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 120/239 (50%), Positives = 165/239 (69%), Gaps = 3/239 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY+ Q AN+ V QL+ LS S+A+I AGL+TSL+PC LS+LP+T+GY+G++ ++R
Sbjct: 9 LYNLSQLANQWVGAQLNHLSLASVAIIMAAGLLTSLTPCMLSMLPITVGYMGSY-ELENR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q +G S F+LGLATTLA LGV AS G YGQ+G GLP+ S +AI+MGLNLLE + L
Sbjct: 68 WQAVGQSSWFALGLATTLAGLGVVASSLGWVYGQVGVGLPIVVSAIAIIMGLNLLEALPL 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
+ D P S+++YL GLTF L ASPCSTPVLATLL +V DP++G
Sbjct: 128 PPLPSYSGMD--FMQETMPRSLKSYLLGLTFGLVASPCSTPVLATLLAWVGQKGDPILGS 185
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFP 336
+LLL+YT GYVAPL++A F +++ +L+ R++S WI P SG LL+G G+++ + R P
Sbjct: 186 SLLLAYTIGYVAPLVIAGIFTASIKKILALRQWSGWITPASGVLLIGFGVFSLVSRFMP 244
>gi|22297596|ref|NP_680843.1| c-type cytochrome biogenesis [Thermosynechococcus elongatus BP-1]
gi|22293773|dbj|BAC07605.1| ccdA [Thermosynechococcus elongatus BP-1]
Length = 240
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/252 (48%), Positives = 167/252 (66%), Gaps = 14/252 (5%)
Query: 85 MADGSLGDMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLT 144
MA SLG LY Q A++ V GQL L+ S ++F AGL+TSL+PCTLS+LP+T
Sbjct: 1 MASLSLG------LYQLEQWADQWVTGQLRDLTPISGGIVFLAGLLTSLTPCTLSMLPIT 54
Query: 145 LGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLA 204
+GYI + S K + + S+ F+LGLATTL +LG+ A+ AG+ YGQ+G GL L S +A
Sbjct: 55 VGYIAGYAS-KQNSSGLRQSLWFALGLATTLTVLGITATLAGRIYGQVGWGLTLGVSLVA 113
Query: 205 IVMGLNLLEIIELQLPS--FFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLAT 262
I+MGLNLL+ + L P F + R P+S+QAY G TF + A+PCSTPVLAT
Sbjct: 114 ILMGLNLLDALPLSFPRSRFLEELPDRV-----PASLQAYTLGATFGIVAAPCSTPVLAT 168
Query: 263 LLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALL 322
LL +VAT+++ +G LLL+YTTGYV PL++ +F+GALQ LL+ R++S WI +SG LL
Sbjct: 169 LLAWVATTQNLWVGAGLLLAYTTGYVVPLMIVGTFSGALQKLLALRQWSGWITRISGVLL 228
Query: 323 LGGGLYTFLDRL 334
+ G+ RL
Sbjct: 229 IAFGVIALATRL 240
>gi|255079638|ref|XP_002503399.1| predicted protein [Micromonas sp. RCC299]
gi|226518665|gb|ACO64657.1| predicted protein [Micromonas sp. RCC299]
Length = 293
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 141/281 (50%), Positives = 182/281 (64%), Gaps = 29/281 (10%)
Query: 88 GSLGDMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGY 147
GS+GD L+SA Q A+ V QL ++ + AV+ AGLVTSLSPCTLSVLPLT+GY
Sbjct: 13 GSVGDDISMGLFSAAQSADSVVGSQLENVTPITFAVVLVAGLVTSLSPCTLSVLPLTIGY 72
Query: 148 IGAFGSGKSRAQ------------------------IIGDSIAFSLGLATTLALLGVGAS 183
IG + K Q ++ + AF+ GLA+TLA LGVGA+
Sbjct: 73 IGGYAGPKEAEQGPEDETEEARARRLEAVAKAKADALLVNGFAFAAGLASTLAALGVGAA 132
Query: 184 FAGKAYGQIGTG---LPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
AGKAYGQ+G LP+A S LA+ MGLNLLE+I +Q PSF +FD R + P Q
Sbjct: 133 TAGKAYGQVGGDGPILPIAVSVLAVAMGLNLLEVIVVQFPSFGTDFDARKM--SLPPPAQ 190
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGA 300
AYLAGL FALAASPCSTPVLATLL YV+++ DP+ GG LLL+YT+GYVAPLL AA+ G+
Sbjct: 191 AYLAGLAFALAASPCSTPVLATLLAYVSSTGDPVTGGALLLTYTSGYVAPLLAAATATGS 250
Query: 301 LQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFPTTMAM 341
L ++S R++++W+ P SG +L+ GG Y FL R+ P +
Sbjct: 251 LGRIMSARQYTAWVTPASGLMLVAGGTYGFLSRVAPVVQGI 291
>gi|443323037|ref|ZP_21052048.1| cytochrome c biogenesis protein [Gloeocapsa sp. PCC 73106]
gi|442787218|gb|ELR96940.1| cytochrome c biogenesis protein [Gloeocapsa sp. PCC 73106]
Length = 242
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 136/239 (56%), Positives = 172/239 (71%), Gaps = 8/239 (3%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q AN+ V QL+ LS SLAV+ AGL+TSLSPC LS+LPLT+GYIG + +++
Sbjct: 9 LYYLEQSANQLVSQQLNHLSILSLAVVLLAGLLTSLSPCMLSMLPLTVGYIGGY-QNQTK 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q + SI F+LGLATTLALLG+ A G+ YGQIG GLPL S +AI+MGLNLLEI+ +
Sbjct: 68 LQAMIQSIWFALGLATTLALLGIIAVSLGRVYGQIGVGLPLIVSAIAIIMGLNLLEILPI 127
Query: 218 QLPSF--FDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLI 275
PS D P+ FP +V++YL GLTF L ASPCSTPVLATLL +VA S+D L+
Sbjct: 128 SFPSLGTTDWITPK-----FPPAVRSYLLGLTFGLVASPCSTPVLATLLAWVAGSQDLLM 182
Query: 276 GGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
G LLL+YT GYVAPL++A +F GA++ LS R++S WINP+SG+LLLG G + L RL
Sbjct: 183 GVILLLTYTIGYVAPLVIAGTFTGAIKQFLSLRRWSGWINPVSGSLLLGFGTLSLLYRL 241
>gi|170077709|ref|YP_001734347.1| putative c-type cytochrome biogenesis protein [Synechococcus sp.
PCC 7002]
gi|3184559|gb|AAC18974.1| putative c-type cytochrome biogenesis protein [Synechococcus sp.
PCC 7002]
gi|169885378|gb|ACA99091.1| putative c-type cytochrome biogenesis protein [Synechococcus sp.
PCC 7002]
Length = 246
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/225 (53%), Positives = 157/225 (69%), Gaps = 8/225 (3%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q ++ V QLS S S+ ++FGAGL+TSL+PCTLS+LP+T+GYIG R
Sbjct: 9 LYHLQQFSDSLVNEQLSHWSLLSIFLVFGAGLLTSLTPCTLSMLPITIGYIGG-TQDNDR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S+ F LGLATTLA LG+ A+ G+ YGQ+G GLP+ S +AI+MGLNLLEI+ L
Sbjct: 68 LQAFFQSLWFCLGLATTLAGLGIVAAGFGQIYGQVGIGLPIIVSAIAILMGLNLLEIVPL 127
Query: 218 QLPSF--FDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLI 275
+ PS D P +FP +V+AYL GLTF L ASPCSTPVLATLL +V+T+++ +
Sbjct: 128 RFPSLGATDWIKP-----DFPKAVRAYLVGLTFGLVASPCSTPVLATLLAWVSTTQNLAL 182
Query: 276 GGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGA 320
G LLL+YT GYV P+L+A F +L+ LLS R++S WINP+SGA
Sbjct: 183 GAALLLAYTLGYVVPVLIAGIFTASLKRLLSLRQWSGWINPVSGA 227
>gi|428769367|ref|YP_007161157.1| cytochrome c biogenesis protein transmembrane region
[Cyanobacterium aponinum PCC 10605]
gi|428683646|gb|AFZ53113.1| cytochrome c biogenesis protein transmembrane region
[Cyanobacterium aponinum PCC 10605]
Length = 243
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/239 (52%), Positives = 162/239 (67%), Gaps = 6/239 (2%)
Query: 92 DMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAF 151
+ F LY Q ANE V QL +S S +IF GL+TSL+PC LS+LPLT+ YIG +
Sbjct: 3 ESFSNQLYYLQQFANELVNNQLHQVSIFSFLIIFVTGLITSLTPCMLSMLPLTIAYIGGY 62
Query: 152 GSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNL 211
+ K R S F+LGLATTL LLGV A+ G+ YGQIGTGLP+ S +AI+MGLNL
Sbjct: 63 ET-KGRLSSFLQSAYFALGLATTLTLLGVFAALLGRVYGQIGTGLPIFVSAIAILMGLNL 121
Query: 212 LEIIELQLPSFFDNFD-PRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATS 270
LEI+ L+ P N+D NFP+S+++YL GLTF L ASPCSTPVL TLL +VA+S
Sbjct: 122 LEIVPLKFP----NWDASNWVKDNFPNSLKSYLLGLTFGLIASPCSTPVLITLLAFVASS 177
Query: 271 KDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYT 329
++ + LL+SY GYV PL+LA +F G L+SLL+ R + WINP+SG +LL G+Y+
Sbjct: 178 ENIFLSSLLLVSYAIGYVFPLILAGTFTGTLKSLLNLRVITQWINPISGGILLIFGIYS 236
>gi|218441888|ref|YP_002380217.1| cytochrome C biogenesis protein transmembrane region [Cyanothece
sp. PCC 7424]
gi|218174616|gb|ACK73349.1| cytochrome c biogenesis protein transmembrane region [Cyanothece
sp. PCC 7424]
Length = 253
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 126/231 (54%), Positives = 162/231 (70%), Gaps = 4/231 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q AN V QLS LS SL +IF AGLVTSL+PC LS+LP+T+ YIG + K R
Sbjct: 9 LYHLEQLANNLVSSQLSHLSLLSLGIIFLAGLVTSLTPCMLSMLPITIAYIGGY-QDKGR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q I S+ FSLGLATTLA LG+ A+ G+ YGQIG GLP+ S +AI+MGLNLLE+I L
Sbjct: 68 FQSIIQSVWFSLGLATTLAGLGIFAASVGRVYGQIGLGLPILVSLIAILMGLNLLEVISL 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
PS +FP+ +++YL GLTF L ASPCSTPVLATLL +VA+S+D ++G
Sbjct: 128 PFPSLGAT---DWIKEDFPAGLRSYLLGLTFGLVASPCSTPVLATLLAWVASSEDLVLGA 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLY 328
LLL+YT GYV PL++A +F +++ LL R++S WINP+SG LLL G++
Sbjct: 185 GLLLAYTAGYVVPLIIAGTFTASIKQLLEMRRWSGWINPVSGVLLLCFGVF 235
>gi|412988201|emb|CCO17537.1| predicted protein [Bathycoccus prasinos]
Length = 297
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/230 (53%), Positives = 162/230 (70%), Gaps = 14/230 (6%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGK-----------SRAQIIGDSIAF 167
T+ ++F AGLVTSLSPCTLSVLPLTLGYIG + S ++ + ++IAF
Sbjct: 65 TTFVLVFVAGLVTSLSPCTLSVLPLTLGYIGGYASSSLKENEEENEDAKKSAMRVNAIAF 124
Query: 168 SLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFD 227
++GLA+ AL GV A+ AGKA+GQIG P++ + LAIVMGLNLL ++L+ PSF NFD
Sbjct: 125 AVGLASAFALFGVFAATAGKAFGQIGVVAPISVAVLAIVMGLNLLGEVQLRFPSFGSNFD 184
Query: 228 PRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYV-ATSKDPLIGGTLLLSYTTG 286
PR + N P + +++AG TFALAASPC+TPVL+TLL YV A+S + L GG LL SYT G
Sbjct: 185 PR--SLNLPPFLTSFVAGATFALAASPCATPVLSTLLAYVAASSNNVLSGGFLLFSYTLG 242
Query: 287 YVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFP 336
Y APLLLAAS AG ++S++ R+ ++W+ P SG LL+ GG Y L R+ P
Sbjct: 243 YSAPLLLAASAAGNIKSVMGVREKTAWVTPASGFLLVAGGWYALLGRVVP 292
>gi|303278102|ref|XP_003058344.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459504|gb|EEH56799.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 237
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/245 (53%), Positives = 167/245 (68%), Gaps = 18/245 (7%)
Query: 98 LYSAGQQANEAVLGQLS-ALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS 156
L++A Q A+ V L+ +++ + A++ AGLVTSLSPCTLS KS
Sbjct: 3 LFAAAQSADSIVSDSLAGSVTPATFAIVLLAGLVTSLSPCTLSA---------RAAKAKS 53
Query: 157 RAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTG-----LPLAASGLAIVMGLNL 211
A + + +AF+ GLA+TLALLGV A+ GKAYGQ G G LP+A S LA MGLNL
Sbjct: 54 DAMTV-NGMAFAGGLASTLALLGVSAAAVGKAYGQSGLGGDDKLLPIAVSLLAATMGLNL 112
Query: 212 LEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSK 271
LE+I +Q PSF ++FD R + P Q+YLAGL FALAASPCSTPVLATLLGYVA+S
Sbjct: 113 LEVIVVQFPSFGNDFDARKL--SLPPPAQSYLAGLAFALAASPCSTPVLATLLGYVASSG 170
Query: 272 DPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFL 331
DP+ GG LLL+YT+GYVAPLL AA+ G+LQ ++S R +++W+ P SG LL+ GG Y FL
Sbjct: 171 DPVGGGALLLTYTSGYVAPLLAAATVTGSLQKIMSARAYTAWVTPASGFLLVAGGTYGFL 230
Query: 332 DRLFP 336
R+ P
Sbjct: 231 SRVAP 235
>gi|425445425|ref|ZP_18825455.1| CcdA protein [Microcystis aeruginosa PCC 9443]
gi|389734577|emb|CCI01778.1| CcdA protein [Microcystis aeruginosa PCC 9443]
Length = 242
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/237 (54%), Positives = 164/237 (69%), Gaps = 4/237 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q A+ V QL+ LSF S+AVIF AGL+TSL+PC LS+LP+T+ YIG + K R
Sbjct: 9 LYHLEQYADRLVTSQLTHLSFVSIAVIFLAGLLTSLTPCMLSMLPITVAYIGGY-ENKGR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
S FSLGLATTLA LG+ A+ GK YGQ+G GLP+ S +AI+MGLNLLE++ L
Sbjct: 68 LAAFWQSTWFSLGLATTLAGLGLIAATLGKVYGQVGIGLPIIVSAIAILMGLNLLELLPL 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
+ PS +FP +Q+YL GLTF L ASPCSTPVLATLL +VA + D +GG
Sbjct: 128 RFPSLGAT---DWITGDFPPILQSYLLGLTFGLIASPCSTPVLATLLAWVANTGDLSLGG 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLLSYT GYV PL++ SF +L+S LS R++S WINP+SG LL+G G+++ L RL
Sbjct: 185 GLLLSYTAGYVLPLIIVGSFTASLKSFLSLRQWSGWINPVSGVLLIGFGVFSLLSRL 241
>gi|145349815|ref|XP_001419323.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579554|gb|ABO97616.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 225
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/224 (55%), Positives = 162/224 (72%), Gaps = 13/224 (5%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFG---------SGKSRAQIIG-DSIAFS 168
T+ + AG+ TSLSPCTLSVLPLT+GYIG +G S + RA+ + S+AF+
Sbjct: 3 TTYVTVLAAGVFTSLSPCTLSVLPLTIGYIGGYGGGGGAGEAPSAEERAKTVRVASVAFA 62
Query: 169 LGLATTLALLGVGASFAGKAYGQ-IGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFD 227
GLA+TLA LGV A+ G AYGQ +G GLP AA+ LA+ MGLNLL+++E+ PSF NFD
Sbjct: 63 GGLASTLAALGVVAASFGAAYGQGLGDGLPTAAAALAVAMGLNLLDVVEVSFPSFGANFD 122
Query: 228 PRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGY 287
P++ + +QAY+AG FALAASPC+TP+LATLL Y A+S DPL GGTLLL+YT+GY
Sbjct: 123 PKSVRVS--PVLQAYIAGAVFALAASPCATPILATLLAYAASSGDPLSGGTLLLTYTSGY 180
Query: 288 VAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFL 331
VAPLL AA+ L+S+++ R+ S+W+NP SG LL+ GG Y FL
Sbjct: 181 VAPLLFAATATDGLKSVMALREKSAWVNPTSGFLLVAGGTYAFL 224
>gi|284928825|ref|YP_003421347.1| cytochrome c biogenesis protein [cyanobacterium UCYN-A]
gi|284809284|gb|ADB94989.1| cytochrome c biogenesis protein [cyanobacterium UCYN-A]
Length = 251
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/238 (45%), Positives = 154/238 (64%), Gaps = 6/238 (2%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q AN+ V QL ++ A+I AGL+TSL+PC +S+LP+T+ YIG S K
Sbjct: 14 LYFFEQFANKVVSAQLEHINIVGFAIIVFAGLLTSLNPCVVSMLPITIAYIGCHESQKKV 73
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
I S FSLGLATTL LLG+ A+ GK YGQ+G P+ S ++I+MGLNLL ++
Sbjct: 74 EGFI-QSFLFSLGLATTLVLLGITAALLGKIYGQVGIQSPIFVSIISILMGLNLLGLVSF 132
Query: 218 QLPSF-FDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIG 276
Q PS +N+ ++AYL G+TF L ASPCSTPVLATLL +V +++ +G
Sbjct: 133 QFPSVRVENW----VINKLNLRIRAYLFGMTFGLVASPCSTPVLATLLTWVTNTQNLALG 188
Query: 277 GTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
++LL+YT GYV+PL+L +F L+ +L+FR++S+ INPMS LL+G G ++ L +
Sbjct: 189 ASVLLAYTIGYVSPLILVGTFTATLKQILNFRRWSAIINPMSAVLLIGFGTFSLLSHI 246
>gi|428203411|ref|YP_007082000.1| cytochrome c biogenesis protein [Pleurocapsa sp. PCC 7327]
gi|427980843|gb|AFY78443.1| cytochrome c biogenesis protein [Pleurocapsa sp. PCC 7327]
Length = 246
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/237 (51%), Positives = 163/237 (68%), Gaps = 4/237 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q AN V QL+ LS SLA+IF AGL+TSL+PC LS+LP+T+GYIG + K +
Sbjct: 9 LYQLEQFANRLVSLQLTHLSGVSLAIIFLAGLLTSLTPCMLSMLPITIGYIGGY-EAKGK 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S FSLGLATTLA LG+ A+ G+ YGQ+G GLP+ S +AI+MGLNLL ++ L
Sbjct: 68 WQAAVQSTWFSLGLATTLAGLGIIAASLGRVYGQVGIGLPILVSAIAIIMGLNLLALLPL 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
+ PS FP+ +++YL GLTF L ASPCSTPVLA+LL +VA+++D L+G
Sbjct: 128 RFPSLGAT---DWIKEEFPTGLRSYLLGLTFGLVASPCSTPVLASLLAWVASTQDLLLGA 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLLSYT GYV PL++A +F +L+ LL R++S WI P SG LL+ G+++ L RL
Sbjct: 185 GLLLSYTGGYVTPLIVAGTFTASLKKLLELRRWSGWIKPASGVLLIVFGVFSLLSRL 241
>gi|425457076|ref|ZP_18836782.1| CcdA protein [Microcystis aeruginosa PCC 9807]
gi|389801662|emb|CCI19195.1| CcdA protein [Microcystis aeruginosa PCC 9807]
Length = 242
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 128/237 (54%), Positives = 164/237 (69%), Gaps = 4/237 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q A+ V QL+ LSF S+AVIF AGL+TSL+PC LS+LP+T+ YIG + K R
Sbjct: 9 LYHLEQYADRLVTSQLTHLSFVSIAVIFLAGLLTSLTPCMLSMLPITVAYIGGY-ENKGR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
S FSLGLATTLA LG+ A+ GK YGQ+G GLP+ S +AI+MGLNLLE++ L
Sbjct: 68 LAAFWQSTWFSLGLATTLAGLGLIAATLGKVYGQVGIGLPIIVSAIAILMGLNLLELLPL 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
+ PS +FP +++YL GLTF L ASPCSTPVLATLL +VA + D +GG
Sbjct: 128 RFPSLGAT---DWITGDFPPILRSYLLGLTFGLIASPCSTPVLATLLAWVANTGDLSLGG 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLLSYT GYV PL++ SF +L+S LS R++S WINP+SG LL+G G+++ L RL
Sbjct: 185 GLLLSYTAGYVLPLIIVGSFTASLKSFLSLRQWSGWINPISGVLLIGFGVFSLLSRL 241
>gi|443653386|ref|ZP_21131063.1| cytochrome C biogenesis transmembrane region family protein
[Microcystis aeruginosa DIANCHI905]
gi|159030208|emb|CAO91100.1| ccdA [Microcystis aeruginosa PCC 7806]
gi|443334025|gb|ELS48555.1| cytochrome C biogenesis transmembrane region family protein
[Microcystis aeruginosa DIANCHI905]
Length = 242
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 128/237 (54%), Positives = 164/237 (69%), Gaps = 4/237 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q A+ V QL+ LSF S+AVIF AGL+TSL+PC LS+LP+T+ YIG + K R
Sbjct: 9 LYHLEQYADRLVTSQLTHLSFVSIAVIFLAGLLTSLTPCMLSMLPITVAYIGGY-ENKGR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
S FSLGLATTLA LG+ A+ GK YGQ+G GLP+ S +AI+MGLNLLE++ L
Sbjct: 68 LAAFWQSTWFSLGLATTLAGLGLIAATLGKVYGQVGIGLPIIVSAIAILMGLNLLELLPL 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
+ PS +FP +++YL GLTF L ASPCSTPVLATLL +VA + D +GG
Sbjct: 128 RFPSLGAT---DWITGDFPPILRSYLLGLTFGLIASPCSTPVLATLLAWVANTGDLSLGG 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLLSYT GYV PL++ SF +L+S LS R++S WINP+SG LL+G G+++ L RL
Sbjct: 185 GLLLSYTAGYVLPLIIVGSFTASLKSFLSLRQWSGWINPVSGVLLIGFGVFSLLSRL 241
>gi|422301516|ref|ZP_16388883.1| CcdA protein [Microcystis aeruginosa PCC 9806]
gi|425438060|ref|ZP_18818469.1| CcdA protein [Microcystis aeruginosa PCC 9432]
gi|425438832|ref|ZP_18819174.1| CcdA protein [Microcystis aeruginosa PCC 9717]
gi|425452738|ref|ZP_18832553.1| CcdA protein [Microcystis aeruginosa PCC 7941]
gi|425459839|ref|ZP_18839325.1| CcdA protein [Microcystis aeruginosa PCC 9808]
gi|389676799|emb|CCH94193.1| CcdA protein [Microcystis aeruginosa PCC 9432]
gi|389717299|emb|CCH98584.1| CcdA protein [Microcystis aeruginosa PCC 9717]
gi|389765364|emb|CCI08734.1| CcdA protein [Microcystis aeruginosa PCC 7941]
gi|389789511|emb|CCI14479.1| CcdA protein [Microcystis aeruginosa PCC 9806]
gi|389827637|emb|CCI20948.1| CcdA protein [Microcystis aeruginosa PCC 9808]
Length = 242
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 128/237 (54%), Positives = 164/237 (69%), Gaps = 4/237 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q A+ V QL+ LSF S+AVIF AGL+TSL+PC LS+LP+T+ YIG + K R
Sbjct: 9 LYHLEQYADRLVTSQLTHLSFVSIAVIFLAGLLTSLTPCMLSMLPITVAYIGGY-ENKGR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
S FSLGLATTLA LG+ A+ GK YGQ+G GLP+ S +AI+MGLNLLE++ L
Sbjct: 68 LAAFWQSTWFSLGLATTLAGLGLIAATLGKVYGQVGIGLPIIVSAIAILMGLNLLELLPL 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
+ PS +FP +++YL GLTF L ASPCSTPVLATLL +VA + D +GG
Sbjct: 128 RFPSLGAT---DWITGDFPPILRSYLLGLTFGLIASPCSTPVLATLLAWVANTGDLSLGG 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLLSYT GYV PL++ SF +L+S LS R++S WINP+SG LL+G G+++ L RL
Sbjct: 185 GLLLSYTAGYVLPLIIVGSFTASLKSFLSLRQWSGWINPVSGVLLIGFGVFSLLSRL 241
>gi|220910346|ref|YP_002485657.1| cytochrome c biogenesis protein transmembrane subunit [Cyanothece
sp. PCC 7425]
gi|219866957|gb|ACL47296.1| cytochrome c biogenesis protein transmembrane region [Cyanothece
sp. PCC 7425]
Length = 244
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 124/241 (51%), Positives = 160/241 (66%), Gaps = 5/241 (2%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q A+ V QL LS S+ +IF AGL+TSL+PCTLS+LP+T+GYIG + + +SR
Sbjct: 9 LYLLEQYADRLVSQQLGELSLLSILLIFTAGLLTSLTPCTLSMLPITVGYIGGYET-QSR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S F+LGLATTLA LG+ A+ AGK YGQIG+GL + S +AIVMGLNLLE +
Sbjct: 68 WQAAVQSTWFALGLATTLAGLGMVAAIAGKIYGQIGSGLAIGVSIIAIVMGLNLLEALP- 126
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
+ P ++A+ GLTF L ASPCSTPVLATLLG+++T+ DP++GG
Sbjct: 127 ---LPLPSLTGWGIVDKLPQGMRAFGLGLTFGLVASPCSTPVLATLLGWISTTHDPILGG 183
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFPT 337
LLLSYT GY APL+LA +F ++ L R++S WI P SG LLLG G++ L L P
Sbjct: 184 GLLLSYTAGYAAPLVLAGTFTATIKHFLELRRWSGWITPTSGVLLLGFGVFALLSHLLPI 243
Query: 338 T 338
T
Sbjct: 244 T 244
>gi|440754645|ref|ZP_20933847.1| cytochrome C biogenesis transmembrane region family protein
[Microcystis aeruginosa TAIHU98]
gi|440174851|gb|ELP54220.1| cytochrome C biogenesis transmembrane region family protein
[Microcystis aeruginosa TAIHU98]
Length = 242
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/237 (53%), Positives = 164/237 (69%), Gaps = 4/237 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q A+ V QL+ LSF S+AVIF AGL+TSL+PC LS+LP+T+ YIG + + R
Sbjct: 9 LYHLEQYADRLVTSQLTHLSFVSIAVIFLAGLLTSLTPCMLSMLPITVAYIGGY-ENQGR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
S FSLGLATTLA LG+ A+ GK YGQ+G GLP+ S +AI+MGLNLLE++ L
Sbjct: 68 LAAFWQSTWFSLGLATTLAGLGLIAATLGKVYGQVGIGLPIIVSAIAILMGLNLLELLPL 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
+ PS +FP +++YL GLTF L ASPCSTPVLATLL +VA + D +GG
Sbjct: 128 RFPSLGAT---DWITGDFPPILRSYLLGLTFGLIASPCSTPVLATLLAWVANTGDLSLGG 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLLSYT GYV PL++ SF +L+S LS R++S WINP+SG LL+G G+++ L RL
Sbjct: 185 GLLLSYTAGYVLPLIIVGSFTASLKSFLSLRQWSGWINPVSGVLLIGFGVFSLLSRL 241
>gi|425472114|ref|ZP_18850965.1| CcdA protein [Microcystis aeruginosa PCC 9701]
gi|389881889|emb|CCI37594.1| CcdA protein [Microcystis aeruginosa PCC 9701]
Length = 242
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/237 (53%), Positives = 164/237 (69%), Gaps = 4/237 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q A+ V QL+ LSF S+AVIF AGL+TSL+PC LS+LP+T+ YIG + K R
Sbjct: 9 LYHLEQYADRLVTSQLTHLSFVSIAVIFLAGLLTSLTPCMLSMLPITVAYIGGY-ENKGR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
S FSLGLATTLA LG+ A+ GK YGQ+G GLP+ S +AI+MGLNLLE++ L
Sbjct: 68 LAAFWQSTWFSLGLATTLAGLGLIAATLGKVYGQVGIGLPIIVSAIAILMGLNLLELLPL 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
+ PS +FP +++YL GLTF L ASPCSTPVLA+LL +VA + D +GG
Sbjct: 128 RFPSLGAT---DWITGDFPPILRSYLLGLTFGLIASPCSTPVLASLLAWVANTGDLSLGG 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLLSYT GYV PL++ SF +L+S LS R++S WINP+SG LL+G G+++ L RL
Sbjct: 185 GLLLSYTAGYVLPLIIVGSFTASLKSFLSLRQWSGWINPVSGVLLIGFGVFSLLSRL 241
>gi|428222957|ref|YP_007107127.1| cytochrome c biogenesis protein [Synechococcus sp. PCC 7502]
gi|427996297|gb|AFY74992.1| cytochrome c biogenesis protein [Synechococcus sp. PCC 7502]
Length = 245
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 110/238 (46%), Positives = 158/238 (66%), Gaps = 5/238 (2%)
Query: 97 FLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS 156
+LY A+ V QL+ LS S+ ++F AGL+TSL+PCTLS+LPLT+GYIG F S K+
Sbjct: 12 WLYQIENFADGIVKTQLAHLSIFSVGLVFLAGLITSLTPCTLSMLPLTIGYIGGFES-KN 70
Query: 157 RAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIE 216
S+ F+LG ATTL LG+ A+ GK YGQ+G+GL + +AI MGL LLE+I
Sbjct: 71 TLSSAWQSMWFALGFATTLCGLGLAAALFGKIYGQVGSGLSIILGIIAIAMGLYLLELIP 130
Query: 217 LQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIG 276
LQLP N+ P ++++YL GL+F L ASPCSTPVL TLL Y++T+ +PL+G
Sbjct: 131 LQLP----NWGSIEIGQTLPKNLRSYLIGLSFGLVASPCSTPVLITLLAYISTTNNPLLG 186
Query: 277 GTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLL+Y G V P+++A +F GA++ LL R++S + +SG +L+G G + L+++
Sbjct: 187 TMLLLAYAIGSVLPVVIAGTFTGAIKQLLKLRQWSGGLTWLSGIILIGFGTISILNQI 244
>gi|16332146|ref|NP_442874.1| thiol:disulfide interchange protein DsbD [Synechocystis sp. PCC
6803]
gi|383323889|ref|YP_005384743.1| thiol:disulfide interchange protein DsbD [Synechocystis sp. PCC
6803 substr. GT-I]
gi|383327058|ref|YP_005387912.1| thiol:disulfide interchange protein DsbD [Synechocystis sp. PCC
6803 substr. PCC-P]
gi|383492942|ref|YP_005410619.1| thiol:disulfide interchange protein DsbD [Synechocystis sp. PCC
6803 substr. PCC-N]
gi|384438210|ref|YP_005652935.1| thiol:disulfide interchange protein DsbD [Synechocystis sp. PCC
6803]
gi|451816298|ref|YP_007452750.1| thiol:disulfide interchange protein DsbD [Synechocystis sp. PCC
6803]
gi|1653775|dbj|BAA18686.1| thiol:disulfide interchange protein; DsbD [Synechocystis sp. PCC
6803]
gi|339275243|dbj|BAK51730.1| thiol:disulfide interchange protein DsbD [Synechocystis sp. PCC
6803]
gi|359273209|dbj|BAL30728.1| thiol:disulfide interchange protein DsbD [Synechocystis sp. PCC
6803 substr. GT-I]
gi|359276379|dbj|BAL33897.1| thiol:disulfide interchange protein DsbD [Synechocystis sp. PCC
6803 substr. PCC-N]
gi|359279549|dbj|BAL37066.1| thiol:disulfide interchange protein DsbD [Synechocystis sp. PCC
6803 substr. PCC-P]
gi|407960210|dbj|BAM53450.1| thiol:disulfide interchange protein DsbD [Synechocystis sp. PCC
6803]
gi|451782267|gb|AGF53236.1| thiol:disulfide interchange protein DsbD [Synechocystis sp. PCC
6803]
Length = 248
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/237 (54%), Positives = 165/237 (69%), Gaps = 4/237 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
L+ Q A+ V+ QL L+ SL +I AGLVTSL+PC LS+LPLT+ YIG G R
Sbjct: 9 LFFLQQWADRLVVEQLGQLTPLSLLIILLAGLVTSLTPCLLSLLPLTIAYIGGTTEGD-R 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q + S+ F+LGLA TLA LG+GA+ GK YGQIG GLP+ S +AI+MGLNLLE++ L
Sbjct: 68 LQSLRQSLWFALGLAITLASLGLGAAALGKIYGQIGLGLPILVSLVAILMGLNLLELLPL 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
Q PS +FP +++A LAGLTF L ASPCSTPVLA+LL +VA+ +D L+G
Sbjct: 128 QFPSLGAT---DWIKDDFPPALRALLAGLTFGLIASPCSTPVLASLLAWVASRQDLLLGS 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLL+YT GYVAPL+L FAG+L+ LL R++S W+NP+SG +LLG G+ T L RL
Sbjct: 185 GLLLAYTVGYVAPLILVGLFAGSLKRLLQLRQWSGWLNPLSGTILLGFGVITLLSRL 241
>gi|428216988|ref|YP_007101453.1| cytochrome c biogenesis protein transmembrane region [Pseudanabaena
sp. PCC 7367]
gi|427988770|gb|AFY69025.1| cytochrome c biogenesis protein transmembrane region [Pseudanabaena
sp. PCC 7367]
Length = 241
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 109/242 (45%), Positives = 156/242 (64%), Gaps = 5/242 (2%)
Query: 92 DMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAF 151
+ F +LY+ A+ V QL+ LS S+ V+F AGLVTSLSPCTLS++P+T+GYIG +
Sbjct: 3 ETFNYWLYNLENWADLLVSNQLTHLSPISIGVMFLAGLVTSLSPCTLSMVPITVGYIGGY 62
Query: 152 GSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNL 211
S S + + S+ F+ G ATTL G+ A+ G+ YGQ G G L +AIVMG L
Sbjct: 63 ESKNSFSAAL-QSLWFAFGFATTLTGFGLAAALLGRVYGQTGWGWSLLMGIVAIVMGFQL 121
Query: 212 LEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSK 271
L +I LQLP++ N D + P +++YL GLTF + ASPCSTPVL TLL +V+++
Sbjct: 122 LGLITLQLPNW-GNVD---VSDTLPRGLRSYLIGLTFGIVASPCSTPVLITLLTWVSSTG 177
Query: 272 DPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFL 331
+ +G +LL+Y G + PL++A +F G ++ LL+ RK+SSWI P SG +L+G G + L
Sbjct: 178 NMALGTVVLLAYAIGLIMPLIVAGTFTGTVKQLLAVRKWSSWITPASGIVLIGFGTVSIL 237
Query: 332 DR 333
R
Sbjct: 238 SR 239
>gi|443325890|ref|ZP_21054564.1| cytochrome c biogenesis protein [Xenococcus sp. PCC 7305]
gi|442794517|gb|ELS03930.1| cytochrome c biogenesis protein [Xenococcus sp. PCC 7305]
Length = 241
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/236 (53%), Positives = 164/236 (69%), Gaps = 4/236 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY + A+ V QL LS S+ +IF AGL+TSL+PC LS+LP+T+GYIG + S + R
Sbjct: 8 LYYLERFADNLVATQLDHLSVVSMGIIFLAGLLTSLTPCMLSMLPITIGYIGGYES-QGR 66
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S F+LGLATTLALLGV A+ GK YGQIG GLP+ S +AIVMGLNLLEI+ L
Sbjct: 67 WQAATQSSWFALGLATTLALLGVIATTIGKVYGQIGLGLPIVVSLIAIVMGLNLLEIVPL 126
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
+ PS P V++YL GLTF L ASPCSTPVLATLL +VAT++D L+G
Sbjct: 127 RFPSLGAT---EWITDELPHGVRSYLLGLTFGLVASPCSTPVLATLLAWVATTQDLLLGA 183
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDR 333
LLL+Y GYVAPL+LA +F +++ LL R++S WINP+SG LL+ G+++ L+R
Sbjct: 184 GLLLAYALGYVAPLILAGTFTASIKKLLELRRWSGWINPVSGTLLVLFGVFSLLNR 239
>gi|166365257|ref|YP_001657530.1| putative c-type cytochrome biogenesis protein [Microcystis
aeruginosa NIES-843]
gi|425467513|ref|ZP_18846793.1| putative c-type cytochrome biogenesis protein [Microcystis
aeruginosa PCC 9809]
gi|166087630|dbj|BAG02338.1| putative c-type cytochrome biogenesis protein [Microcystis
aeruginosa NIES-843]
gi|389829690|emb|CCI28774.1| putative c-type cytochrome biogenesis protein [Microcystis
aeruginosa PCC 9809]
Length = 242
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 127/237 (53%), Positives = 164/237 (69%), Gaps = 4/237 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q A+ V QL+ LSF S+AVIF AGL+TSL+PC LS+LP+T+ YIG + + R
Sbjct: 9 LYHLEQYADRLVTSQLTHLSFVSIAVIFLAGLLTSLTPCMLSMLPITVAYIGGY-ENQGR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
S FSLGLATTLA LG+ A+ GK YGQ+G GLP+ S +AI+MGLNLLE++ L
Sbjct: 68 LAAFWQSTWFSLGLATTLAGLGLIAATLGKVYGQVGIGLPIIVSAIAILMGLNLLELLPL 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
+ PS +FP +++YL GLTF L ASPCSTPVLATLL +VA + D +GG
Sbjct: 128 RFPSLGAT---DWITGDFPPILRSYLLGLTFGLIASPCSTPVLATLLAWVANTGDLSLGG 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLLSYT GYV PL++ SF +L+S LS R++S WINP+SG LL+G G+++ L RL
Sbjct: 185 GLLLSYTGGYVLPLIIVGSFTASLKSFLSLRQWSGWINPVSGVLLIGFGVFSLLSRL 241
>gi|390441811|ref|ZP_10229842.1| putative c-type cytochrome biogenesis protein [Microcystis sp.
T1-4]
gi|389834865|emb|CCI33968.1| putative c-type cytochrome biogenesis protein [Microcystis sp.
T1-4]
Length = 242
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/237 (53%), Positives = 164/237 (69%), Gaps = 4/237 (1%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY Q A+ V QL+ LSF S+AVIF AGL+TSL+PC LS+LP+T+ YIG + + R
Sbjct: 9 LYHLEQYADRLVTSQLTHLSFVSIAVIFLAGLLTSLTPCMLSMLPITVAYIGGY-ENQGR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
S FSLGLATTLA LG+ A+ GK YGQ+G GLP+ S +AI+MGLNLLE++ L
Sbjct: 68 LAAFWQSTWFSLGLATTLAGLGLIAATLGKVYGQVGIGLPIIVSAIAILMGLNLLELLPL 127
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
+ PS +FP +++YL GLTF L ASPCSTPVLA+LL +VA + D +GG
Sbjct: 128 RFPSLGAT---DWITGDFPPILRSYLLGLTFGLIASPCSTPVLASLLAWVANTGDLSLGG 184
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LLLSYT GYV PL++ SF +L+S LS R++S WINP+SG LL+G G+++ L RL
Sbjct: 185 GLLLSYTGGYVLPLIIVGSFTASLKSFLSLRQWSGWINPVSGVLLIGFGVFSLLSRL 241
>gi|297611212|ref|NP_001065713.2| Os11g0140800 [Oryza sativa Japonica Group]
gi|255679775|dbj|BAF27558.2| Os11g0140800 [Oryza sativa Japonica Group]
Length = 113
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/108 (83%), Positives = 102/108 (94%), Gaps = 1/108 (0%)
Query: 235 FPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
FP VQAYLAGLTFALAASPCSTPVLATLLGYVATS+DP++GG+LLL+YTTGYVAPLL+A
Sbjct: 6 FPIGVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLIA 65
Query: 295 ASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFP-TTMAM 341
ASFAGALQSLLSFR++S+WINP+SGA LLGGG+YT LDRLFP T+M M
Sbjct: 66 ASFAGALQSLLSFRRYSAWINPISGAFLLGGGVYTLLDRLFPATSMVM 113
>gi|443478510|ref|ZP_21068255.1| cytochrome c biogenesis protein transmembrane region [Pseudanabaena
biceps PCC 7429]
gi|443016194|gb|ELS30910.1| cytochrome c biogenesis protein transmembrane region [Pseudanabaena
biceps PCC 7429]
Length = 247
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 105/238 (44%), Positives = 147/238 (61%), Gaps = 5/238 (2%)
Query: 97 FLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS 156
+ Y Q A+ V QL+ S+TS+ ++F AGLVTSL+PCTLS+LPLT+GYIG + S KS
Sbjct: 14 WFYHLEQWADVLVHKQLNQASWTSVGIVFLAGLVTSLTPCTLSMLPLTIGYIGGYES-KS 72
Query: 157 RAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIE 216
+ S F LG A L G+ A+ GK YGQ G + +AIVMGL LLE+I
Sbjct: 73 TGKAALQSAWFCLGFAIALTGFGLAAALLGKIYGQTAWGWSVVMGLIAIVMGLQLLEVIS 132
Query: 217 LQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIG 276
+LPSF N++ + N P +++ L GL+F ASPCSTPVL TLL +V+ S + L+G
Sbjct: 133 FRLPSF-GNWE---ISPNLPQGLRSLLIGLSFGFVASPCSTPVLVTLLAWVSGSGNLLMG 188
Query: 277 GTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LL+Y G V PL +A +F G ++ L R++SSW+N SG +L+ G + L ++
Sbjct: 189 TEFLLAYAIGSVLPLAIAGTFTGIIKRFLELRRWSSWLNWGSGLILIAFGTLSILSKI 246
>gi|37521288|ref|NP_924665.1| c-type cytochrome biogenesis protein [Gloeobacter violaceus PCC
7421]
gi|35212285|dbj|BAC89660.1| ccdA [Gloeobacter violaceus PCC 7421]
Length = 242
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/238 (44%), Positives = 152/238 (63%), Gaps = 5/238 (2%)
Query: 97 FLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS 156
+LY Q A + QL+ +S TS +++ GL TS +PC LS+LP+T+GYIG + S +S
Sbjct: 8 WLYQIEQGAEQLARAQLTQISPTSFLLLYLIGLATSFTPCILSMLPVTIGYIGGYQS-RS 66
Query: 157 RAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIE 216
R + + S F+LGLA T+ LG+ A+ G YGQ+GTG +A LAI+MG NLL +I
Sbjct: 67 RFEALVQSGWFALGLAVTITGLGLVATIPGMLYGQVGTGWFIAMGALAILMGFNLLGLIP 126
Query: 217 LQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIG 276
L LP + FD A + P S+++ G TF L ASPCSTPVL LL +V+T+ +P +G
Sbjct: 127 LSLPQW-GGFD---LAKDTPQSLKSLATGATFGLVASPCSTPVLIALLAWVSTTGNPWVG 182
Query: 277 GTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LL SY+ G+ PL+LA +F GAL+++LS R++S IN +SG LL+ G L+ L
Sbjct: 183 AGLLFSYSIGHATPLILAGAFTGALKAMLSLRRWSGLINQVSGILLIFTGTLAILNIL 240
>gi|443315941|ref|ZP_21045408.1| cytochrome c biogenesis protein [Leptolyngbya sp. PCC 6406]
gi|442784471|gb|ELR94344.1| cytochrome c biogenesis protein [Leptolyngbya sp. PCC 6406]
Length = 247
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/244 (50%), Positives = 171/244 (70%), Gaps = 6/244 (2%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY+ Q AN+ V QL++LS S+ ++ AGL+TSL+PC LS+LP+ +GY+G + + R
Sbjct: 9 LYAVSQYANQLVASQLTSLSLLSVVIVGVAGLLTSLTPCMLSMLPIMVGYMGGY-EAEDR 67
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q I S F+LGLATTLA LG+ A G+ YGQ+G GLP+ S LAI+MGLNLLE + L
Sbjct: 68 GQAIAQSTWFALGLATTLAALGLLAGAVGRVYGQVGMGLPILVSILAILMGLNLLEALPL 127
Query: 218 QLPSFFD-NFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIG 276
LPS + +F R P +V++YL GLTF + ASPCSTPVLATLL +++T+ DP++G
Sbjct: 128 ALPSGGNLDFLNR----GLPQAVKSYLLGLTFGVVASPCSTPVLATLLAWISTTGDPVLG 183
Query: 277 GTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFP 336
LLL+YT GYVAPL+LA SF ++ LL+ R++S WI P SG LL+G G+++ L R+ P
Sbjct: 184 AGLLLAYTVGYVAPLVLAGSFTATIKRLLALRRWSGWITPASGILLVGFGVFSLLVRVLP 243
Query: 337 TTMA 340
++
Sbjct: 244 GSLV 247
>gi|86608114|ref|YP_476876.1| cytochrome c biogenesis membrane protein [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86556656|gb|ABD01613.1| cytochrome c biogenesis membrane protein [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 249
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/242 (46%), Positives = 153/242 (63%), Gaps = 9/242 (3%)
Query: 97 FLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFG---- 152
+LY Q A E V QL LS SL V+ AGL+TSLSPCTLS+LP+T+GYIG +
Sbjct: 8 WLYHLEQWATELVQFQLQHLSPVSLLVVGLAGLLTSLSPCTLSMLPVTIGYIGGYTPASE 67
Query: 153 --SGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLN 210
+G+ R Q+ S+ F+ G+A TL LLG+ A+ G+ YGQ G+ P+ G+AI+MGLN
Sbjct: 68 ETAGEGRWQVWAQSLGFAAGVAFTLTLLGLSAALLGRVYGQTGSFGPVVVGGIAILMGLN 127
Query: 211 LLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATS 270
LLE+I L+ P +F+ + +P +A L GLTF L ASPCSTPVL LL +V+T+
Sbjct: 128 LLEVIPLRFPDWFNRLE---IPGEWPRLGRAVLLGLTFGLVASPCSTPVLVALLAWVSTT 184
Query: 271 KDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTF 330
P +GG LLL+Y G PLLLA F G ++ LL+ R++S W+ SG +L+G G T
Sbjct: 185 GQPWVGGGLLLAYGLGLAFPLLLAGVFTGLVKQLLALRRWSGWLTYASGVVLVGFGSVTI 244
Query: 331 LD 332
L
Sbjct: 245 LS 246
>gi|86604975|ref|YP_473738.1| cytochrome c biogenesis membrane protein [Synechococcus sp.
JA-3-3Ab]
gi|86553517|gb|ABC98475.1| cytochrome c biogenesis membrane protein [Synechococcus sp.
JA-3-3Ab]
Length = 249
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 113/249 (45%), Positives = 157/249 (63%), Gaps = 9/249 (3%)
Query: 90 LGDMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIG 149
+ D +LY Q A + V GQL LS SL ++ AGLVTSLSPC LS+LP+T+GYIG
Sbjct: 1 MADTLQLWLYHLEQWATQLVQGQLQHLSPLSLLLVGLAGLVTSLSPCMLSLLPVTIGYIG 60
Query: 150 AFG------SGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGL 203
+ +G+ R Q+ S+ F+ G+A TL+ LG+GA+ G+ YGQ L A G+
Sbjct: 61 GYAPTTPAAAGEVRWQVWVQSLGFAAGVALTLSGLGLGAALLGRVYGQTAAFGSLVAGGI 120
Query: 204 AIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATL 263
AI+MGLNLLE++ L+ P +F+ + +P ++ L G TF L ASPCSTPVL L
Sbjct: 121 AILMGLNLLEVVPLRFPDWFNRLE---IPGQWPGLGRSVLLGSTFGLVASPCSTPVLVAL 177
Query: 264 LGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLL 323
LG+V+T+ P +GG LLL+Y G V+PLLLA FAG+++ LL+ R++S W SG +L+
Sbjct: 178 LGWVSTTGQPWVGGGLLLAYALGLVSPLLLAGVFAGSMKQLLALRRWSIWFTYASGVVLV 237
Query: 324 GGGLYTFLD 332
G G T L
Sbjct: 238 GFGTVTILS 246
>gi|428179402|gb|EKX48273.1| hypothetical protein GUITHDRAFT_105877 [Guillardia theta CCMP2712]
Length = 251
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 148/247 (59%), Gaps = 13/247 (5%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
L+S Q V +L+ +S TS V+ AG++TSL+PC LS LP +GYIG G + R
Sbjct: 9 LFSIEQTMTSVVSNELTHISPTSTFVMLLAGILTSLTPCALSTLPFIVGYIG--GVDERR 66
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTG-----LPLAASGLAIVMGLNLL 212
+ I+ S AFSLG AT+L +LG+GA+ G YG +G + +S L +VMGL LL
Sbjct: 67 SPIV-PSAAFSLGFATSLCMLGLGAALFGSVYGATSSGPLQETFAIVSSALFVVMGLALL 125
Query: 213 EIIELQLPSFFDNFDPRAAAANFPSS--VQAYLAGLTFALAASPCSTPVLATLLGYVATS 270
+I L LPS + + P+ V+AY+ G++ A +SPC+TPVLA+LL ++A +
Sbjct: 126 DI--LPLPSLISAPKIDETSRDNPAQAVVRAYIFGISVAFVSSPCATPVLASLLTFIANN 183
Query: 271 K-DPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYT 329
K DP +G LLL+Y+ GY +P+ A ++SL+ + W P+SG++L+ G Y
Sbjct: 184 KTDPSVGAVLLLAYSIGYTSPVFAAGLTTQFMKSLVGMKANFRWFTPLSGSMLIAYGTYE 243
Query: 330 FLDRLFP 336
++R+FP
Sbjct: 244 AVNRIFP 250
>gi|116071319|ref|ZP_01468588.1| putative c-type cytochrome biogenesis protein CcdA [Synechococcus
sp. BL107]
gi|116066724|gb|EAU72481.1| putative c-type cytochrome biogenesis protein CcdA [Synechococcus
sp. BL107]
Length = 239
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 132/223 (59%), Gaps = 7/223 (3%)
Query: 97 FLYSAGQQANEAVLGQ-LSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGK 155
L S Q +EA+L L+ ++A++FG G +TSL PC+LS+LP+TL Y+ F G+
Sbjct: 6 LLLSEMAQRSEALLSSALANPGPLTIALVFGGGALTSLGPCSLSLLPVTLAYLAGFEDGR 65
Query: 156 SRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEII 215
S Q S+AF G+ L +LG + GK YGQ+ +P + LA+ MGLNLL +I
Sbjct: 66 SPWQ---RSLAFCFGIVGALVVLGSLSGLLGKIYGQMPALVPTLVAILAVAMGLNLLGLI 122
Query: 216 ELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLI 275
++LP+ DP + P+ AGL F +AASPC+TPV+A LLG++A S PL+
Sbjct: 123 RIRLPA---GPDPNSWRNKVPAPFAPVAAGLAFGVAASPCTTPVVAVLLGWIAQSGRPLV 179
Query: 276 GGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMS 318
G LL S+ G V PLL+A +FA ++ LL R W+ P+S
Sbjct: 180 GVALLTSFGIGQVLPLLIAGTFAASVPKLLELRPIGRWVPPIS 222
>gi|56751199|ref|YP_171900.1| c-type cytochrome biogenesis protein CcdA [Synechococcus elongatus
PCC 6301]
gi|81299134|ref|YP_399342.1| cytochrome c biogenesis protein-like protein [Synechococcus
elongatus PCC 7942]
gi|6137101|gb|AAF04331.1|AF079137_3 CcdA [Synechococcus elongatus PCC 6301]
gi|56686158|dbj|BAD79380.1| putative c-type cytochrome biogenesis protein CcdA [Synechococcus
elongatus PCC 6301]
gi|81168015|gb|ABB56355.1| Cytochrome c biogenesis protein-like [Synechococcus elongatus PCC
7942]
Length = 252
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 150/238 (63%), Gaps = 4/238 (1%)
Query: 97 FLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS 156
L+ A V QL + A+++ AGL TSL+PCTLS+LP+T Y+G + G
Sbjct: 15 LLFQLSLWAETLVNSQLQHPGLPTFAIVWVAGLATSLTPCTLSMLPVTFAYLGGYSEGD- 73
Query: 157 RAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIE 216
RAQ + S F LGLATTL LG+ A+ G+ YGQIG GL LA+S +AIVMGLNLLE++
Sbjct: 74 RAQSLRQSGLFCLGLATTLMGLGLSAAVLGRIYGQIGWGLTLASSLIAIVMGLNLLELLP 133
Query: 217 LQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIG 276
L+LP +P ++AYL GLTF L ASPCSTPVLATLL +VA S +G
Sbjct: 134 LRLPGLNTT---SWLQEEWPIDLRAYLLGLTFGLVASPCSTPVLATLLAWVAASGQVQLG 190
Query: 277 GTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LL +Y G V PLLLA A +L+ LL+ R++S+W+ P SG +L+G G+ T L RL
Sbjct: 191 AALLGTYALGSVLPLLLAGLLAASLRQLLALRQWSAWLTPTSGVVLIGFGVLTLLLRL 248
>gi|124026563|ref|YP_001015678.1| c-type cytochrome biogenesis protein CcdA [Prochlorococcus marinus
str. NATL1A]
gi|123961631|gb|ABM76414.1| putative c-type cytochrome biogenesis protein CcdA [Prochlorococcus
marinus str. NATL1A]
Length = 246
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 126/213 (59%), Gaps = 6/213 (2%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
++ ++F GL+TSL PC+LS+LP+T+ Y+ F + ++ Q +I+F G+ +L +LG
Sbjct: 37 TILIVFSGGLLTSLGPCSLSLLPITVAYLAGFKNNQNPLQ---KTISFCSGIVFSLVVLG 93
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
+ F GK YGQ+ + S LAI+MGLNLL I++ LPS DP PS+
Sbjct: 94 SLSGFLGKIYGQLPGFFSIFISFLAIIMGLNLLGILKFSLPS---GPDPEIWKNKVPSAF 150
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
AG F LA+SPC+TPVLA LL +VA +PL G L S+ G + PL +A +FA
Sbjct: 151 APVSAGFAFGLASSPCTTPVLAVLLAWVAKQGNPLSGTIFLGSFAIGQIVPLFVAGTFAA 210
Query: 300 ALQSLLSFRKFSSWINPMSGALLLGGGLYTFLD 332
++ LLS R W+ P+SG +LL GL + L
Sbjct: 211 SIPKLLSLRPIGKWVPPISGVILLTIGLISLLS 243
>gi|72382827|ref|YP_292182.1| c-type cytochrome biogenesis protein CcdA [Prochlorococcus marinus
str. NATL2A]
gi|72002677|gb|AAZ58479.1| putative c-type cytochrome biogenesis protein CcdA [Prochlorococcus
marinus str. NATL2A]
Length = 246
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 126/213 (59%), Gaps = 6/213 (2%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
++ ++F GL+TSL PC+LS+LP+T+ Y+ F + ++ Q +I+F G+ +L +LG
Sbjct: 37 TILIVFTGGLLTSLGPCSLSLLPITVAYLAGFKNNQNPLQ---KTISFCSGIVFSLVVLG 93
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
+ F GK YGQ+ + S LAI+MGLNLL I++ LPS DP PS+
Sbjct: 94 SLSGFLGKIYGQLPGFFSIFISFLAIIMGLNLLGILKFSLPS---GPDPEIWKNKVPSAF 150
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
AG F LA+SPC+TPVLA LL +VA +PL G L S+ G + PL +A +FA
Sbjct: 151 APVSAGFAFGLASSPCTTPVLAVLLAWVAKQGNPLSGTIFLGSFAIGQIVPLFVAGTFAA 210
Query: 300 ALQSLLSFRKFSSWINPMSGALLLGGGLYTFLD 332
++ LLS R W+ P+SG +LL GL + L
Sbjct: 211 SIPKLLSLRPIGKWVPPISGVILLTIGLISLLS 243
>gi|78184050|ref|YP_376485.1| c-type cytochrome biogenesis protein CcdA [Synechococcus sp.
CC9902]
gi|78168344|gb|ABB25441.1| putative c-type cytochrome biogenesis protein CcdA [Synechococcus
sp. CC9902]
Length = 234
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/223 (40%), Positives = 132/223 (59%), Gaps = 7/223 (3%)
Query: 97 FLYSAGQQANEAVLGQ-LSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGK 155
L S Q +EA+L L+ ++A++FG G +TSL PC+LS+LP+TL Y+ F G+
Sbjct: 1 MLLSEMAQRSEALLSSALANPGPLTIALVFGGGALTSLGPCSLSLLPVTLAYLAGFEDGR 60
Query: 156 SRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEII 215
+ Q S+AF G+ L +LG + GK YGQ+ +P + LA+ MGLNLL ++
Sbjct: 61 TPWQ---RSLAFCCGIVGALVVLGSLSGLLGKIYGQMPALVPSLVAILAVAMGLNLLGLL 117
Query: 216 ELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLI 275
+ LP+ DP + P+ AGL F +AASPC+TPV+A LLG++A S PL+
Sbjct: 118 RIPLPA---GPDPNSWRNKVPAPFAPVAAGLAFGVAASPCTTPVVAVLLGWIAQSGRPLV 174
Query: 276 GGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMS 318
G LL S+ G V PLL+A +FA ++ +LL R W+ P+S
Sbjct: 175 GVALLTSFGIGQVLPLLVAGTFAASVPNLLKLRPIGRWVPPIS 217
>gi|296134065|ref|YP_003641312.1| cytochrome c biogenesis protein transmembrane region [Thermincola
potens JR]
gi|296032643|gb|ADG83411.1| cytochrome c biogenesis protein transmembrane region [Thermincola
potens JR]
Length = 230
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/223 (39%), Positives = 134/223 (60%), Gaps = 7/223 (3%)
Query: 106 NEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSI 165
NE + + +S + V+F G++TSLSPC LS++P+ +GYIG + S +SR++ S
Sbjct: 7 NETLPNLVQNVSLLTFLVVFLGGILTSLSPCILSMVPVMMGYIGGY-SERSRSRGFVMSF 65
Query: 166 AFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDN 225
F LGLA T ALLG+ A+ GK +GQIG G + +AIVMGL LLE+I ++ P+
Sbjct: 66 VFVLGLAVTFALLGIFAALLGKIFGQIGKGWYYVIAIVAIVMGLQLLEVINIKFPTLKKM 125
Query: 226 FDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTT 285
P + PS + G+ F L ASPC+TPVLA ++ Y+A + G +L Y
Sbjct: 126 --PIKSRGLLPS----FFIGMLFGLVASPCATPVLAVIMTYIAAQGNIGTGAAMLFIYGL 179
Query: 286 GYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLY 328
G+ PL++A +FA L SL F++++++I SG +L+ GLY
Sbjct: 180 GHGLPLVIAGTFAAFLTSLRKFQQWTAYITKASGVILILVGLY 222
>gi|87301265|ref|ZP_01084106.1| putative c-type cytochrome biogenesis protein CcdA [Synechococcus
sp. WH 5701]
gi|87284233|gb|EAQ76186.1| putative c-type cytochrome biogenesis protein CcdA [Synechococcus
sp. WH 5701]
Length = 210
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 128/212 (60%), Gaps = 3/212 (1%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGA 182
++F AGL+TSL PC+LS+LP+T+ Y+ F S ++ Q S++F+ G+ L LLG
Sbjct: 1 MVFSAGLLTSLGPCSLSLLPITVAYMAGFSSPEAPGQAWQRSLSFAAGIVAALVLLGGTT 60
Query: 183 SFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAY 242
S G+ YGQ+ +P + LA+VMGLNLL ++ L LP+ DP P+ +
Sbjct: 61 SLLGRLYGQVPGVVPTVVALLAVVMGLNLLGLVRLPLPA---GPDPELWRQRVPAPLAPL 117
Query: 243 LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQ 302
AG F LAASPC+TPVLA LL ++A PL+G LL + G V PL+LA + A A+
Sbjct: 118 AAGAAFGLAASPCTTPVLAVLLAWIAQQGQPLVGMLLLTCFGAGQVIPLMLAGTAAAAMP 177
Query: 303 SLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LL+ R+ S WI P+SG +LL G T L +L
Sbjct: 178 RLLALRERSRWIPPISGVVLLASGGLTLLAQL 209
>gi|116073702|ref|ZP_01470964.1| putative c-type cytochrome biogenesis protein CcdA [Synechococcus
sp. RS9916]
gi|116069007|gb|EAU74759.1| putative c-type cytochrome biogenesis protein CcdA [Synechococcus
sp. RS9916]
Length = 206
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/210 (42%), Positives = 125/210 (59%), Gaps = 6/210 (2%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGAS 183
+F G +TSL PC+LS+LP+TL Y+ F + + Q S+ F G+ L +LG +
Sbjct: 1 MFAGGALTSLGPCSLSLLPVTLAYLAGFEAKQPAWQ---RSVLFCSGIVGALVVLGSLSG 57
Query: 184 FAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYL 243
G+ YGQ+ +P + LA+VMGLNLL +I + LP+ DP P+ +
Sbjct: 58 LVGRIYGQVPDVVPTLVALLAVVMGLNLLGLIRIPLPA---GPDPMRWTKRVPAPLAPIA 114
Query: 244 AGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQS 303
AGL F LAASPC+TPVLA LLG++ATS PL+G LL S+ G V PLL+A S A ++
Sbjct: 115 AGLAFGLAASPCTTPVLAVLLGWIATSGQPLVGVMLLTSFGIGQVLPLLIAGSAAASVPK 174
Query: 304 LLSFRKFSSWINPMSGALLLGGGLYTFLDR 333
LL+ R W+ P+SG +LL G+ T L R
Sbjct: 175 LLALRPIGRWVPPISGVVLLSTGMLTLLAR 204
>gi|78213718|ref|YP_382497.1| c-type cytochrome biogenesis protein CcdA [Synechococcus sp.
CC9605]
gi|78198177|gb|ABB35942.1| putative c-type cytochrome biogenesis protein CcdA [Synechococcus
sp. CC9605]
Length = 237
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 121/200 (60%), Gaps = 6/200 (3%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
+LA++FG G +TSL PC+LS+LP+TL Y+ F G+ Q S+AF G+ L +LG
Sbjct: 28 TLALVFGGGALTSLGPCSLSLLPVTLAYLAGFDDGQPAWQ---RSLAFCGGIVGALVVLG 84
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
+ G+ YGQ+ +P + LAI MGLNLL ++ + LPS DP P+ +
Sbjct: 85 SISGLLGRIYGQVPALIPTLVAILAIAMGLNLLGVLRIPLPS---GPDPEQWRQKVPAPL 141
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
AGL F LAASPC+TPVLA LLG++A S PL G LL S+ G V PLLLA +FA
Sbjct: 142 APVAAGLAFGLAASPCTTPVLAVLLGWIAQSGRPLAGVALLSSFGIGQVLPLLLAGTFAA 201
Query: 300 ALQSLLSFRKFSSWINPMSG 319
A+ LL+ R S W+ P SG
Sbjct: 202 AIPKLLALRGISRWVPPASG 221
>gi|260434621|ref|ZP_05788591.1| cytochrome c biogenesis protein [Synechococcus sp. WH 8109]
gi|260412495|gb|EEX05791.1| cytochrome c biogenesis protein [Synechococcus sp. WH 8109]
Length = 237
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/222 (42%), Positives = 129/222 (58%), Gaps = 9/222 (4%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
L +G+Q + L L+ LA++FG G +TSL PC+LS+LP+TL Y+ F G+
Sbjct: 9 LAQSGEQLLQRALADPGPLT---LALVFGGGALTSLGPCSLSLLPVTLAYLAGFDDGQPA 65
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
Q S+AF G+ L +LG + G+ YGQ+ +P + LA+ MGLNLL ++ +
Sbjct: 66 WQ---RSLAFCGGIVGALVVLGSISGLLGRIYGQVPALIPTLVAILAVAMGLNLLGVLRI 122
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
LPS DP P+ + AGL F LAASPC+TPVLA LLG++A S PL G
Sbjct: 123 PLPS---GPDPEQWRQKVPAPLAPVAAGLAFGLAASPCTTPVLAVLLGWIAQSGRPLAGV 179
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSG 319
LL S+ G V PLLLA +FA A+ LL+ R S W+ P SG
Sbjct: 180 ALLSSFGIGQVLPLLLAGTFAAAIPKLLALRGISRWVPPASG 221
>gi|374994996|ref|YP_004970495.1| cytochrome c biogenesis protein [Desulfosporosinus orientis DSM
765]
gi|357213362|gb|AET67980.1| cytochrome c biogenesis protein [Desulfosporosinus orientis DSM
765]
Length = 371
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/225 (40%), Positives = 130/225 (57%), Gaps = 7/225 (3%)
Query: 106 NEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSI 165
N+ + LS T L +F G++TSLSPC LS+LP+ LGYIG S+ + S+
Sbjct: 150 NDTLPRVLSNGGLTILLFVFLGGIMTSLSPCILSMLPVMLGYIGGL-EKPSKTKGFITSM 208
Query: 166 AFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDN 225
+F LGLATT A+LG+ AS GKA+GQIG+ + +I+MGL L+ ++ + LP
Sbjct: 209 SFVLGLATTFAMLGIAASLLGKAFGQIGSAWLYIIALFSIIMGLQLIGVVNINLPGL--- 265
Query: 226 FDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTT 285
+A + ++ GL F L ASPC+TPVLA L+ YVA GG LL Y
Sbjct: 266 ---QAMPEKKGGVLGSFGVGLLFGLVASPCATPVLAVLMTYVAGQGVLWYGGLLLFIYGL 322
Query: 286 GYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTF 330
G+ PL++A +F L+SL +++S +I +SG LL+ GLY F
Sbjct: 323 GHGLPLIIAGTFTAVLKSLPRLQRWSHYITLLSGGLLIVLGLYFF 367
>gi|159904119|ref|YP_001551463.1| c-type cytochrome biogenesis protein CcdA [Prochlorococcus marinus
str. MIT 9211]
gi|159889295|gb|ABX09509.1| putative c-type cytochrome biogenesis protein CcdA [Prochlorococcus
marinus str. MIT 9211]
Length = 210
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 128/213 (60%), Gaps = 6/213 (2%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGV 180
LA+ F +GL+TSL PC+LS+LP+T+ Y+ F K + + S+ FS G+ +L +LG
Sbjct: 2 LAIAFCSGLLTSLGPCSLSLLPITVAYLAGF---KGKQNPLQRSLIFSSGIVLSLVILGS 58
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
+ G+ YGQ+ + L S +AIVMGL+LL II+++LP N +P P +
Sbjct: 59 LSGLFGQIYGQLSSKLNGLVSIIAIVMGLSLLGIIDIKLP---INPNPNLLTEKLPEPLA 115
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGA 300
AG+ F +A+SPC+TPVLA LL ++A + +P+ G LL + G V PL+LA AG+
Sbjct: 116 PIAAGVVFGMASSPCTTPVLAVLLAWIAQNGNPVTGIILLAFFGAGQVIPLVLAGIAAGS 175
Query: 301 LQSLLSFRKFSSWINPMSGALLLGGGLYTFLDR 333
+ +LL+ + FS WI SG + L G + + R
Sbjct: 176 IPNLLALKPFSRWIPIASGIIFLSTGSLSLISR 208
>gi|402572320|ref|YP_006621663.1| thiol:disulfide interchange protein [Desulfosporosinus meridiei DSM
13257]
gi|402253517|gb|AFQ43792.1| thiol:disulfide interchange protein [Desulfosporosinus meridiei DSM
13257]
Length = 302
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/225 (40%), Positives = 127/225 (56%), Gaps = 7/225 (3%)
Query: 106 NEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSI 165
N+ + LS T L +F GL+TSLSPC LS+LP+ LGYIG S+ + S+
Sbjct: 81 NDTLPRVLSNGGVTILLFVFLGGLMTSLSPCILSMLPVMLGYIGGL-EKPSKTKGFITSM 139
Query: 166 AFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDN 225
+F LGLA T ALLG+ AS GKA+GQIG+ + +I+MGL L+ ++ LP
Sbjct: 140 SFVLGLAATFALLGIAASLLGKAFGQIGSAWLYIIALFSIIMGLQLIGVVNFNLPGL--- 196
Query: 226 FDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTT 285
+A + ++ GL F L ASPC+TPVLA L+ YVA GG LL Y
Sbjct: 197 ---QAMPEKKGGVLGSFGVGLLFGLVASPCATPVLAVLMTYVAGQGVLWYGGLLLFIYGL 253
Query: 286 GYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTF 330
G+ PL++A +F L+SL +++ +I +SG LL+ GLY F
Sbjct: 254 GHGLPLIIAGTFTAVLKSLPRLQRWGHYITLLSGGLLIVLGLYFF 298
>gi|352095908|ref|ZP_08956855.1| cytochrome c biogenesis protein transmembrane region [Synechococcus
sp. WH 8016]
gi|351677264|gb|EHA60413.1| cytochrome c biogenesis protein transmembrane region [Synechococcus
sp. WH 8016]
Length = 209
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 123/201 (61%), Gaps = 6/201 (2%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGV 180
+A++F G +TSL PC+LS+LP+TL Y+ F S + Q S++F G+ L +LG
Sbjct: 1 MALVFAGGALTSLGPCSLSLLPITLAYLAGFDSQQKPWQ---RSLSFCAGIVGALVVLGS 57
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
+ G+ YGQ+ +P + LA+VMGLNLL ++ + LP+ DP + P+ +
Sbjct: 58 LSGLLGRIYGQVPGLIPTLVAALAVVMGLNLLGVVRIPLPA---GPDPMRWTSRVPAPLA 114
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGA 300
AGL F LAASPC+TPVLA LLG++A++ PL+G +L S+ G V PLLLA + A +
Sbjct: 115 PVAAGLAFGLAASPCTTPVLAVLLGWIASTGRPLLGVLMLTSFGIGQVLPLLLAGNLAAS 174
Query: 301 LQSLLSFRKFSSWINPMSGAL 321
L LL+ R W+ P+SG +
Sbjct: 175 LPRLLALRPIGRWVPPISGVI 195
>gi|123966871|ref|YP_001011952.1| c-type cytochrome biogenesis protein CcdA [Prochlorococcus marinus
str. MIT 9515]
gi|123201237|gb|ABM72845.1| putative c-type cytochrome biogenesis protein CcdA [Prochlorococcus
marinus str. MIT 9515]
Length = 218
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 127/214 (59%), Gaps = 9/214 (4%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
++ ++F AGL+TSL PC+LS+LP+T+ YIG G+ K++ ++I +FS G+ +L LG
Sbjct: 12 TIFLVFTAGLLTSLGPCSLSLLPITIAYIG--GTKKNKFKLI----SFSGGVIFSLVTLG 65
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
+ F GK YGQ+ + + +AI+MGLNLL I++ QLP + D R P +
Sbjct: 66 ALSGFLGKIYGQLPSYYSSLVAFIAIIMGLNLLGILKFQLP---NGPDLRFMEDKVPPLI 122
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
+L G TF LA+SPC TPVLATLL +V+ +K+P I L + G + PL+LA +
Sbjct: 123 TPFLIGGTFGLASSPCITPVLATLLAWVSQAKNPTISIIFLFFFGLGQITPLILAGATTE 182
Query: 300 ALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDR 333
L+ L RK+S I +SG L+ G+ +
Sbjct: 183 NLKQFLELRKYSQIIPTLSGVFLVSVGILNLISN 216
>gi|126696987|ref|YP_001091873.1| c-type cytochrome biogenesis protein CcdA [Prochlorococcus marinus
str. MIT 9301]
gi|126544030|gb|ABO18272.1| putative c-type cytochrome biogenesis protein CcdA [Prochlorococcus
marinus str. MIT 9301]
Length = 218
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 126/208 (60%), Gaps = 9/208 (4%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
++ +IF AGL+TSL PC+LS+LP+T+ YIG G+ K++ ++I +FS G+ +L LG
Sbjct: 12 TIFLIFSAGLLTSLGPCSLSLLPVTIAYIG--GTEKNKFKLI----SFSGGVVFSLVALG 65
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
+ F GK YGQI + + +AI+MGLNLL I++ + P + D + PS +
Sbjct: 66 SASGFLGKIYGQIPSYYTSIVALIAIIMGLNLLGIVKFKFP---NGPDFKIIEDKIPSFL 122
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
+ G +F LA+SPC TPVLATLL +V+ +K+P I L + G V PL++A + A
Sbjct: 123 APFAIGTSFGLASSPCITPVLATLLVWVSQAKNPTISIIFLFFFGIGQVTPLIVAGATAE 182
Query: 300 ALQSLLSFRKFSSWINPMSGALLLGGGL 327
L+ L RKFS I +SG L+ GL
Sbjct: 183 NLKKFLELRKFSQIIPTLSGIFLVSLGL 210
>gi|194476673|ref|YP_002048852.1| putative c-type cytochrome biogenesis protein CcdA [Paulinella
chromatophora]
gi|171191680|gb|ACB42642.1| putative c-type cytochrome biogenesis protein CcdA [Paulinella
chromatophora]
Length = 217
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 121/211 (57%), Gaps = 5/211 (2%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
+L ++F +GL+TSL PC+LS+LP+TL Y+ F + + I S++FS G+ T++ LG
Sbjct: 7 ALLLVFISGLITSLGPCSLSLLPVTLAYLAGFDNNDQKPWI--RSLSFSSGIVTSMVFLG 64
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
+ + G YG+I + +P+ + L+I+MGL LLE+I + L DP + P S+
Sbjct: 65 LISGTVGHLYGKIPSVVPVLVATLSIIMGLQLLEVIRIPL---RLGPDPESWRRKMPGSL 121
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
AGL F L ASPCSTPVLA LL +A S+ P+ G LL + G V PL++ A
Sbjct: 122 APLTAGLAFGLTASPCSTPVLAVLLASIAQSRQPITGILLLAFFGAGQVVPLMIGGMAAA 181
Query: 300 ALQSLLSFRKFSSWINPMSGALLLGGGLYTF 330
L L F +W+ +SG +L+ G+
Sbjct: 182 NLPRLSILLPFGNWVPSISGVILITTGMMNL 212
>gi|87125404|ref|ZP_01081250.1| putative c-type cytochrome biogenesis protein CcdA [Synechococcus
sp. RS9917]
gi|86167173|gb|EAQ68434.1| putative c-type cytochrome biogenesis protein CcdA [Synechococcus
sp. RS9917]
Length = 206
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/210 (42%), Positives = 124/210 (59%), Gaps = 6/210 (2%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGAS 183
+F G +TSL PC+LS+LP+TL Y+ F + Q S+ F G+ + L +LG +
Sbjct: 1 MFVGGALTSLGPCSLSLLPVTLAYLAGFEGRQPPWQ---RSLLFCAGIVSALVILGSLSG 57
Query: 184 FAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYL 243
G+ YGQ+ L + LA+VMGLNLL ++ L LP+ DP+ + + P+ +
Sbjct: 58 LLGRIYGQVPDALATVVAVLALVMGLNLLGLVRLPLPA---GPDPQHWSQHVPAPLAPIA 114
Query: 244 AGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQS 303
AGL F LAASPC+TPVLA LLG++ATS PLIG LL S+ G V PLLLA S A ++
Sbjct: 115 AGLAFGLAASPCTTPVLAVLLGWIATSGSPLIGVVLLSSFGFGQVMPLLLAGSAAASVPG 174
Query: 304 LLSFRKFSSWINPMSGALLLGGGLYTFLDR 333
LL+ R W+ P+SG +L+ G T
Sbjct: 175 LLALRPIGRWVPPISGMVLIATGALTLFSH 204
>gi|113954204|ref|YP_731524.1| cytochrome C biogenesis protein [Synechococcus sp. CC9311]
gi|113881555|gb|ABI46513.1| Cytochrome c biogenesis protein [Synechococcus sp. CC9311]
Length = 209
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 123/201 (61%), Gaps = 6/201 (2%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGV 180
+A++F G +TSL PC+LS+LP+TL Y+ F S + Q S++F G+ L +LG
Sbjct: 1 MALVFAGGALTSLGPCSLSLLPVTLAYLAGFDSKQKPWQ---RSLSFCAGIVGALVVLGS 57
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
+ G+ YGQI +P + LA+VMGLNLL ++ + LP+ DP + P+ +
Sbjct: 58 LSGLLGRIYGQIPGLVPTLVAVLAMVMGLNLLGVVRIPLPA---GPDPMRWTSKVPAPLA 114
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGA 300
AGL F LAASPC+TPVLA LLG++A++ PL+G +L S+ G V PLLLA + A +
Sbjct: 115 PVAAGLAFGLAASPCTTPVLAVLLGWIASTGRPLLGVLMLTSFGIGQVLPLLLAGNLAAS 174
Query: 301 LQSLLSFRKFSSWINPMSGAL 321
L LL+ R W+ P+SG +
Sbjct: 175 LPRLLALRPIGRWVPPISGVV 195
>gi|91070194|gb|ABE11115.1| putative c-type cytochrome biogenesis protein CcdA [uncultured
Prochlorococcus marinus clone HF10-11D6]
Length = 218
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 127/208 (61%), Gaps = 9/208 (4%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
++ ++F AGL+TSL PC+LS+LP+T+ YIG G+ K++ ++I +FS G+ +L LG
Sbjct: 12 TIFLVFSAGLLTSLGPCSLSLLPVTIAYIG--GTEKNKFKLI----SFSGGVVFSLVALG 65
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
+ F GK YGQI + + +AI+MGLNLL I++ Q P + D + PS +
Sbjct: 66 AASGFLGKIYGQIPSYYTSFVALIAIIMGLNLLGILKFQFP---NGPDLKIIEDKIPSLI 122
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
+ G TF LA+SPC TPVLATLL +V+ +K+P+I L + G V PL+LA + A
Sbjct: 123 APFTIGTTFGLASSPCITPVLATLLAWVSQAKNPIISIIFLFFFGIGQVTPLILAGATAE 182
Query: 300 ALQSLLSFRKFSSWINPMSGALLLGGGL 327
L+ L RKFS I +SG L+ GL
Sbjct: 183 NLKKFLELRKFSQIIPTLSGIFLVALGL 210
>gi|148240366|ref|YP_001225753.1| cytochrome c biogenesis protein [Synechococcus sp. WH 7803]
gi|147848905|emb|CAK24456.1| Cytochrome c biogenesis protein [Synechococcus sp. WH 7803]
Length = 273
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/235 (43%), Positives = 138/235 (58%), Gaps = 10/235 (4%)
Query: 100 SAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ 159
SA Q N A L Q LS L V+ G +TSL PC+LS+LP+TL Y+ F ++ Q
Sbjct: 48 SAEQLLNHA-LEQPGPLS---LGVVLIGGALTSLGPCSLSLLPVTLAYLAGFEGRQAPWQ 103
Query: 160 IIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQL 219
S+AFS G+ L +LG + G YGQ+ +P + LAIVMGLNLL +I + L
Sbjct: 104 ---RSLAFSAGIVAALVMLGSLSGLLGGIYGQVPGLIPTLVAVLAIVMGLNLLGMIRIPL 160
Query: 220 PSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTL 279
P+ DP+A + P+ + AGL F LAASPC+TPVLA LL ++A++ + +IG
Sbjct: 161 PA---GPDPKAWSNRVPAPLAPLAAGLAFGLAASPCTTPVLAVLLAWIASTGNVVIGILF 217
Query: 280 LLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
L S+ G V PLLLA S A +L L++ R S WI +SGA+L+ G T L RL
Sbjct: 218 LSSFGIGQVLPLLLAGSMAASLPKLMALRPVSQWIPSISGAVLITVGSLTLLARL 272
>gi|78779936|ref|YP_398048.1| c-type cytochrome biogenesis protein CcdA [Prochlorococcus marinus
str. MIT 9312]
gi|78713435|gb|ABB50612.1| putative c-type cytochrome biogenesis protein CcdA [Prochlorococcus
marinus str. MIT 9312]
Length = 218
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 126/208 (60%), Gaps = 9/208 (4%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
++ ++F AGL+TSL PC+LS+LP+T+ YIG G+ K++ ++I +FS G+ +L LG
Sbjct: 12 TIFLVFSAGLLTSLGPCSLSLLPVTIAYIG--GTEKNKFKLI----SFSGGVVFSLVALG 65
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
+ F GK YGQI + + +AI+MGLNLL I++ Q P + D + P +
Sbjct: 66 AASGFLGKIYGQIPSYYTSFVALIAIIMGLNLLGILKFQFP---NGPDLKKIEEKIPPLL 122
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
+ G TF LA+SPC TPVLATLL +V+ +K+P+I L + G V PL++A + A
Sbjct: 123 APFTIGTTFGLASSPCITPVLATLLAWVSQAKNPIISIIFLFFFGIGQVTPLIIAGATAE 182
Query: 300 ALQSLLSFRKFSSWINPMSGALLLGGGL 327
L+ L RKFS I +SG L+ GL
Sbjct: 183 NLKKFLELRKFSQIIPTLSGIFLVALGL 210
>gi|33862015|ref|NP_893576.1| c-type cytochrome biogenesis protein CcdA [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
gi|33640383|emb|CAE19918.1| putative c-type cytochrome biogenesis protein CcdA [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
Length = 218
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 123/214 (57%), Gaps = 9/214 (4%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
++ ++F AGL+TSL PC+LS+LP+T+ Y+G + K + I+FS G+ +L LG
Sbjct: 12 TIFLVFTAGLLTSLGPCSLSLLPITIAYVGGTKNNKFKL------ISFSGGVIFSLITLG 65
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
+ F GK YGQ+ + + +AI+MGLNLL I++ QLP + D + PS +
Sbjct: 66 ALSGFLGKIYGQLPSYYASLVALIAIIMGLNLLGILKFQLP---NGPDLQFMEDKVPSII 122
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
++ G F LA+SPC TPVLATLL +V+ +K+P I L + G V PL+LA +
Sbjct: 123 TPFVVGGAFGLASSPCITPVLATLLAWVSQAKNPTISIIFLFFFGLGQVTPLILAGATTE 182
Query: 300 ALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDR 333
L+ L RK+S I +SG L+ G+ +
Sbjct: 183 NLKQFLELRKYSQVIPTLSGVFLVSLGILNLISN 216
>gi|157414060|ref|YP_001484926.1| putative c-type cytochrome biogenesis protein CcdA [Prochlorococcus
marinus str. MIT 9215]
gi|157388635|gb|ABV51340.1| putative c-type cytochrome biogenesis protein CcdA [Prochlorococcus
marinus str. MIT 9215]
Length = 218
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 123/208 (59%), Gaps = 9/208 (4%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
++ ++F AGL+TSL PC+LS+LP+T+ YIG + K + I+FS G+ +L LG
Sbjct: 12 TIFLVFSAGLLTSLGPCSLSLLPVTIAYIGGTENNKFKL------ISFSGGVVFSLVALG 65
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
+ F GK YGQI + + +AI+MGLNLL I++ Q P + D + PS +
Sbjct: 66 AASGFLGKIYGQIPSYYTSFVALVAIIMGLNLLGILKFQFP---NGPDLKILEDKIPSLI 122
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
+ G TF LA+SPC TPVLATLL +V+ +K+P+I L + G V PL++A + A
Sbjct: 123 APFTIGTTFGLASSPCITPVLATLLAWVSQAKNPIISIIFLFFFGIGQVTPLIIAGATAE 182
Query: 300 ALQSLLSFRKFSSWINPMSGALLLGGGL 327
L+ L RK+S I +SG L+ GL
Sbjct: 183 NLKKFLELRKYSQIIPTLSGIFLVALGL 210
>gi|123969193|ref|YP_001010051.1| c-type cytochrome biogenesis protein CcdA [Prochlorococcus marinus
str. AS9601]
gi|123199303|gb|ABM70944.1| putative c-type cytochrome biogenesis protein CcdA [Prochlorococcus
marinus str. AS9601]
Length = 218
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 125/208 (60%), Gaps = 9/208 (4%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
++ +IF AGL+TSL PC+LS+LP+T+ YIG G+ K + ++I +FS G+ +L LG
Sbjct: 12 TIFLIFSAGLLTSLGPCSLSLLPITIAYIG--GTEKKQFKLI----SFSGGVVFSLVALG 65
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
+ G+ YGQI + + +AI+MGLNLL I++ Q P + D + PS +
Sbjct: 66 AASGLLGRIYGQIPSYYTSIVALIAIIMGLNLLGILKFQFP---NGPDLQKIEDKIPSLM 122
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
+ G TF LA+SPC TPVLATLL +V+ +K+P+I L + G V PL++A + A
Sbjct: 123 APFAIGTTFGLASSPCITPVLATLLAWVSQAKNPIISIIFLFFFGIGQVTPLIIAGATAE 182
Query: 300 ALQSLLSFRKFSSWINPMSGALLLGGGL 327
L+ L RKFS I +SG L+ GL
Sbjct: 183 NLKKFLELRKFSQIIPTLSGIFLVALGL 210
>gi|345858715|ref|ZP_08811097.1| cytochrome C biogenesis transmembrane region family protein
[Desulfosporosinus sp. OT]
gi|344328240|gb|EGW39636.1| cytochrome C biogenesis transmembrane region family protein
[Desulfosporosinus sp. OT]
Length = 306
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/201 (42%), Positives = 111/201 (55%), Gaps = 7/201 (3%)
Query: 131 TSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYG 190
TSLSPC LS+LP+ LGYIG S+ + S +F LGLA T A+LGV AS GKA+G
Sbjct: 109 TSLSPCMLSMLPVMLGYIGGL-EKPSKLKGFSASTSFVLGLAVTFAMLGVIASLLGKAFG 167
Query: 191 QIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFAL 250
QIG+ AI MGL L+ II LP + + ++ GL F L
Sbjct: 168 QIGSVWLYMMGFFAIFMGLQLIGIINFNLPGL------KTMPKQNGRFLGSFGVGLLFGL 221
Query: 251 AASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKF 310
ASPC+TPVLA L+ YVA G LL Y G+ PL++ +F L+SL +K+
Sbjct: 222 VASPCATPVLAVLMTYVAGQGVLWYGALLLFIYGLGHGLPLIVVGTFTAVLKSLPRLQKW 281
Query: 311 SSWINPMSGALLLGGGLYTFL 331
+I +SGALL+ GLY FL
Sbjct: 282 GHYITYLSGALLIILGLYLFL 302
>gi|254431894|ref|ZP_05045597.1| cytoChrome c biogenesis protein [Cyanobium sp. PCC 7001]
gi|197626347|gb|EDY38906.1| cytoChrome c biogenesis protein [Cyanobium sp. PCC 7001]
Length = 242
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/216 (41%), Positives = 125/216 (57%), Gaps = 3/216 (1%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
T+L V+F GL+TSL PC+LS+LP+T+ Y+ F ++ A S +F+ G+ + LL
Sbjct: 29 TTLLVVFAGGLLTSLGPCSLSLLPITVAYLAGFRDSEAPALPWLRSASFAGGIVMAMVLL 88
Query: 179 GVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSS 238
G+ + G+ YGQI +P + LA+ MGLNLL ++ LP DP P+
Sbjct: 89 GLASGLLGRVYGQIPGLVPTLVALLAVAMGLNLLGLLRFSLPV---GPDPERWRQRVPAP 145
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFA 298
+ AGL F LAA+PC+TPVLA LLG++ PL+G LL S+ G V PLLLA + A
Sbjct: 146 LAPLAAGLAFGLAATPCTTPVLAVLLGWLTQMGQPLMGMLLLTSFGAGQVMPLLLAGTAA 205
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
L LL R+ W+ P+SG +LL GL T + L
Sbjct: 206 ATLPGLLRLRQLGQWVPPISGVVLLSSGLITLVANL 241
>gi|11465830|ref|NP_053974.1| hypothetical protein PopuCp179 [Porphyra purpurea]
gi|1723410|sp|P51364.1|YCXN_PORPU RecName: Full=Putative cytochrome c-type biogenesis protein
dbsD-like; AltName: Full=ORF240
gi|1276830|gb|AAC08250.1| ORF240 (chloroplast) [Porphyra purpurea]
Length = 240
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 126/237 (53%), Gaps = 6/237 (2%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY++ N L QL+ ++ S + +F +GL TS SPC +S+LP+ + YI G S+
Sbjct: 7 LYNSQHLINNITLYQLNHINIASFSFVFFSGLFTSFSPCLISILPICIMYISGEGQKLSQ 66
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
+ + F LG ++ LG+ A+ K Y Q+ G+P+ ++ + I MG +LL I+ L
Sbjct: 67 IDKLKNLFFFCLGAISSFTTLGLIATLLAKTYSQLFNGIPVISALVIIYMGFSLLNIVPL 126
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
+N + R N +++ YL+G+ LA S CSTP+ TLL +V ++ + IG
Sbjct: 127 ST----NNLNTRINNTN--QNIKMYLSGVGIGLAISSCSTPIFVTLLIWVTSNHNLFIGL 180
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
+L Y+ GY+ P+++ + F+ + S ++ P SG +LL G ++ +
Sbjct: 181 IFILIYSIGYIFPIIIGSLFSSRFLTTASSPFLNNLWAPFSGTILLSAGTFSLFSSI 237
>gi|219123287|ref|XP_002181959.1| biogenesis protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406560|gb|EEC46499.1| biogenesis protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 382
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 128/252 (50%), Gaps = 47/252 (18%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
TSL +++GAGL+TS SPC +LPLT+ YI + Q ++AF+ GLA L
Sbjct: 107 TSLPIMYGAGLLTSFSPCVWGLLPLTMSYISNAAGERQDQQTTLPTLAFAAGLAVVFCSL 166
Query: 179 GVGASFAGKAYGQIGTG---LPLAASGLAIVMGLNLLEIIELQLPSF---------FDNF 226
G+ A G +G + LPL ++ + + MGL LLE++E LPSF F N
Sbjct: 167 GMAAVELGGVFGGSTSSSVLLPLFSNVICLAMGLKLLELVEFPLPSFNALSSAPRSFGNS 226
Query: 227 DPRAAAA-------------NFPSS-----------VQAYLAGLTFALAASPCSTPVLAT 262
D + A SS V+ +L G + AL ASPC+TPVL +
Sbjct: 227 DQSSGQAAPELLLVGEDGLLTMDSSRSRSRDEKGSLVRTFLLGGSSALVASPCATPVLTS 286
Query: 263 LLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG-ALQSLLS----------FRKFS 311
+L +VA +++P +G LLL YT GY PLL+ AS G AL +L + K +
Sbjct: 287 ILAFVAKAQNPALGAALLLGYTLGYSTPLLIIASTGGKALNNLKQQERAEGGASVYGKIA 346
Query: 312 SWINPMSGALLL 323
W+ P++G +LL
Sbjct: 347 PWVTPLTGGILL 358
>gi|317968969|ref|ZP_07970359.1| putative c-type cytochrome biogenesis protein CcdA [Synechococcus
sp. CB0205]
Length = 238
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/202 (43%), Positives = 122/202 (60%), Gaps = 5/202 (2%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
++ ++F GL+TSL PC+LS+LP+TL Y+ F G R S++F G+ +L LLG
Sbjct: 28 TVGLVFAGGLITSLGPCSLSLLPVTLAYLAGFDRGGQRPW--ARSLSFCSGIVGSLVLLG 85
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
+G+ G+ YGQ+ +P + LA+VMGLNLL ++ LQLP+ DP P ++
Sbjct: 86 LGSGALGRIYGQVPGVVPTLVALLAVVMGLNLLGLVPLQLPA---GPDPEQWRQRVPPAL 142
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
AGL F LAASPC+TPVLA LL ++A S PL G LL ++ G V PLLLA + A
Sbjct: 143 APLAAGLAFGLAASPCTTPVLAVLLAWIAQSGTPLTGALLLTAFAAGQVMPLLLAGTAAA 202
Query: 300 ALQSLLSFRKFSSWINPMSGAL 321
LL+ R W+ P+SGA+
Sbjct: 203 WAPRLLALRSLGQWVPPISGAV 224
>gi|33865008|ref|NP_896567.1| c-type cytochrome biogenesis protein CcdA [Synechococcus sp. WH
8102]
gi|33638692|emb|CAE06987.1| putative c-type cytochrome biogenesis protein CcdA [Synechococcus
sp. WH 8102]
Length = 238
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 137/231 (59%), Gaps = 7/231 (3%)
Query: 104 QANEAVLGQ-LSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIG 162
Q +EA+L Q L+ +L ++ G +TSL PC+LS+LP+TL Y+ F G++ Q
Sbjct: 12 QTSEALLDQALAQPGPLTLGLVLAGGALTSLGPCSLSLLPVTLAYLAGFEDGQTPWQ--- 68
Query: 163 DSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSF 222
S+AF G+ L LLG + G+ YGQ+ +P + LA++MGLNLL ++ + LPS
Sbjct: 69 RSLAFCGGIVGALVLLGSLSGLLGRIYGQVPALVPTLVAVLAVLMGLNLLGLLRIPLPS- 127
Query: 223 FDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS 282
DP P+ + AGL F LAASPC+TPVLA LLG++A S PL+G LL
Sbjct: 128 --GPDPERWRNKVPAPLAPVAAGLAFGLAASPCTTPVLAVLLGWIAQSGRPLVGMVLLSC 185
Query: 283 YTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDR 333
+ G V PLLLA +FA ++ LL+ R W+ P+SG +LL G+ T L R
Sbjct: 186 FGVGQVLPLLLAGTFAASVPKLLALRSVGRWVPPISGVVLLTSGVLTLLAR 236
>gi|427704271|ref|YP_007047493.1| cytochrome c biogenesis protein [Cyanobium gracile PCC 6307]
gi|427347439|gb|AFY30152.1| cytochrome c biogenesis protein [Cyanobium gracile PCC 6307]
Length = 242
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/241 (40%), Positives = 142/241 (58%), Gaps = 6/241 (2%)
Query: 96 GFLYSAGQQANEAVL-GQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGS- 153
G ++ +++E +L G L+ +LAV+F GL+TSL PC+LS+LP+TL Y+ FG+
Sbjct: 5 GLPFADWARSSELLLQGSLAHPGPLTLAVVFSGGLLTSLGPCSLSLLPVTLAYLAGFGAE 64
Query: 154 GKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLE 213
G+ RA S++F+ G+ L LLG+ + G+ YG+I LPL + +A+VMGLNLL
Sbjct: 65 GQGRAPW-QRSVSFAAGIVAALVLLGLASGLMGRLYGRIPGQLPLLVAVVAVVMGLNLLG 123
Query: 214 IIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDP 273
++ L DP P+ + AGL F LAA+PC+TPVLA LL ++A + P
Sbjct: 124 LLRL---PLPAGPDPERWRRRVPAPLAPLAAGLAFGLAATPCTTPVLAVLLAWMAQTGQP 180
Query: 274 LIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDR 333
L+G LL + G V PLLLA + A +L LL R+ W+ P+SG +LL G T L
Sbjct: 181 LVGLVLLACFGAGQVMPLLLAGTVAASLPGLLQLRRLGQWVPPISGVVLLASGGLTLLSV 240
Query: 334 L 334
L
Sbjct: 241 L 241
>gi|90994555|ref|YP_537045.1| hypothetical protein 240 [Pyropia yezoensis]
gi|122194657|sp|Q1XDC3.1|YCXN_PORYE RecName: Full=Putative cytochrome c-type biogenesis protein
dbsD-like
gi|90819119|dbj|BAE92488.1| unnamed protein product [Pyropia yezoensis]
Length = 224
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 109/208 (52%), Gaps = 6/208 (2%)
Query: 97 FLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS 156
F+Y++ N L QL+ L+ TS + IF +GL TSLSPC +S+LP+ + YI +
Sbjct: 6 FVYNSQHFVNNITLYQLNHLNSTSFSFIFLSGLFTSLSPCIISILPVCILYIAGETQKLN 65
Query: 157 RAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIE 216
+ F LG ++ LG+ A+ K Y Q G+P ++ + I MGLNLL I+
Sbjct: 66 PINKTKNLFLFCLGTISSFITLGILATLITKTYSQFFNGIPTISAVVIIYMGLNLLNIVH 125
Query: 217 LQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIG 276
+ P F N + + YL+G+ +A S CSTP+ TLL ++ +++ G
Sbjct: 126 INSPKF------NGLVTNNNYNFKMYLSGVGIGIAISSCSTPIFVTLLVWINSTQKIFTG 179
Query: 277 GTLLLSYTTGYVAPLLLAASFAGALQSL 304
+L Y+ GY+ P+++ + F+ + L
Sbjct: 180 LIFILIYSIGYIFPIIIGSIFSTSFLKL 207
>gi|33863743|ref|NP_895303.1| c-type cytochrome biogenesis protein CcdA [Prochlorococcus marinus
str. MIT 9313]
gi|33635326|emb|CAE21651.1| putative c-type cytochrome biogenesis protein CcdA [Prochlorococcus
marinus str. MIT 9313]
Length = 236
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/201 (45%), Positives = 121/201 (60%), Gaps = 6/201 (2%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
+LA++F AG +TSL PC+LS+LP+TL Y+ F S ++ + SIAF G+ +L LLG
Sbjct: 27 TLALVFAAGFLTSLGPCSLSLLPVTLAYLAGFDSNQAPWR---RSIAFCGGIVGSLVLLG 83
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
+ G+ YGQ+ +P + LA+VMGLNLL +++L DP P+ +
Sbjct: 84 SLSGLIGRIYGQVPGVVPTLVALLAVVMGLNLLGLLKL---PLPAGPDPDLWRQRVPAPL 140
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
AGL F LAASPC+TPVLA LLG++A S PL+G LL + G V PLLLA S A
Sbjct: 141 APVAAGLAFGLAASPCTTPVLAVLLGWIAQSGQPLVGIVLLTCFGIGQVLPLLLAGSAAA 200
Query: 300 ALQSLLSFRKFSSWINPMSGA 320
L LL+ R WI PMSGA
Sbjct: 201 ILPKLLALRPLGRWIPPMSGA 221
>gi|33241061|ref|NP_876003.1| c-type cytochrome biogenesis protein CcdA [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
gi|33238590|gb|AAQ00656.1| Cytochrome c biogenesis protein [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 217
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 122/214 (57%), Gaps = 6/214 (2%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
+L +IF GL+TSL PC+LS+LP+T+ Y+ F + S+ F G+ +L +LG
Sbjct: 8 TLIIIFTGGLLTSLGPCSLSLLPVTVAYLAGF---NEKQNPFIRSLIFCSGIVLSLVILG 64
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
+ GK YGQ+ + + + + I+MGLNLL +++LQLP+ FD P +
Sbjct: 65 SLSGLFGKLYGQLPSEIGIIVPLITILMGLNLLGLLKLQLPNA-PEFD--TWLGKVPKPL 121
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
AGLTF LAASPC+TPVLA LL ++A +P G LL + TG V PLLLA + A
Sbjct: 122 APIAAGLTFGLAASPCTTPVLAVLLTWIADKGNPATGVVLLTCFGTGQVIPLLLAGTTAA 181
Query: 300 ALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDR 333
A+ LS R + WI +SG + L GL + R
Sbjct: 182 AVPKFLSIRAITRWIPSLSGVIFLTTGLLSLFAR 215
>gi|124022182|ref|YP_001016489.1| c-type cytochrome biogenesis protein CcdA [Prochlorococcus marinus
str. MIT 9303]
gi|123962468|gb|ABM77224.1| putative c-type cytochrome biogenesis protein CcdA [Prochlorococcus
marinus str. MIT 9303]
Length = 222
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 120/201 (59%), Gaps = 6/201 (2%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
+LA++F AG +TSL PC+LS+LP+TL Y+ F S ++ + SIAF G+ +L LLG
Sbjct: 13 TLALVFAAGFLTSLGPCSLSLLPVTLAYLAGFDSNQAPWR---RSIAFCGGIVGSLVLLG 69
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
+ G+ YGQ+ +P + LA+VMGLNLL +++L DP P+ +
Sbjct: 70 SLSGLIGRIYGQVPGVVPTLVALLAVVMGLNLLGLLKL---PLPAGPDPDLWRQRVPAPL 126
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
AGL F LAASPC+TPVLA LLG++A PL+G LL + G V PLLLA S A
Sbjct: 127 APVAAGLAFGLAASPCTTPVLAVLLGWIAQRGQPLVGIVLLTCFGIGQVLPLLLAGSAAA 186
Query: 300 ALQSLLSFRKFSSWINPMSGA 320
L LL+ R WI PMSGA
Sbjct: 187 ILPKLLALRPLGRWIPPMSGA 207
>gi|378787401|gb|AFC40032.1| hypothetical protein [Porphyra umbilicalis]
Length = 240
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 121/238 (50%), Gaps = 6/238 (2%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
LY+ N L QL+ L+ S + +F +GL TS SPC +SVLP+ + YI S+
Sbjct: 7 LYNGQHLINNITLNQLNHLNLASFSFVFVSGLFTSCSPCLISVLPICIVYISGESQELSQ 66
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
+ + F LG ++ LG+ A+ K Y + G+P+ ++ + I MG +LL ++ L
Sbjct: 67 INKLKNLFFFCLGSISSFTTLGLIATLLAKTYSKFFNGIPIISALVIIYMGFSLLNLVPL 126
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
N +++ YL+G+ LA S CSTP+ TLL ++ +S IG
Sbjct: 127 SNN------KINTKINNNNQNIKMYLSGIGIGLAISSCSTPIFVTLLIWINSSHKLFIGL 180
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLF 335
+L Y+ GY+ P+++ + F+ ++ S F++ P SG +LL G ++ +F
Sbjct: 181 IFILIYSIGYIFPIIIGSLFSSRFLTVGSNPFFNNLWAPFSGTILLSAGTFSLFSSIF 238
>gi|148242991|ref|YP_001228148.1| cytochrome c biogenesis protein [Synechococcus sp. RCC307]
gi|147851301|emb|CAK28795.1| Cytochrome c biogenesis protein [Synechococcus sp. RCC307]
Length = 238
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 137/232 (59%), Gaps = 8/232 (3%)
Query: 104 QANEAVLGQ-LSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIG 162
QA+E +L L + +L ++F GL+TSL PC+LS+LP+++ Y+ FG G + +
Sbjct: 13 QASEQLLRSGLEHPTPLTLVLVFAGGLLTSLGPCSLSLLPVSVAYLAGFGEGPAWQR--- 69
Query: 163 DSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSF 222
S F G+ L +LG ++ G+ YGQ + +A + LA++MGLNLL ++ L+LPS
Sbjct: 70 -SAGFCSGVVGALVILGTASAMLGRLYGQTPEAISVAVAILAVLMGLNLLGLLPLRLPS- 127
Query: 223 FDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS 282
DP P+ AGL F LAASPC+TPVLA LL +++ S PL+G LL
Sbjct: 128 --GPDPERWRRFAPAGFGPPAAGLAFGLAASPCTTPVLAVLLAWISQSGKPLVGMVLLSC 185
Query: 283 YTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
+ G V PLLLA S A ++ LL+ R S WI P+SGA+L+ G + + RL
Sbjct: 186 FGAGQVLPLLLAGSLAASIPKLLALRAVSQWIPPISGAVLVVIGGLSLVSRL 237
>gi|189424251|ref|YP_001951428.1| cytochrome c biogenesis protein transmembrane protein [Geobacter
lovleyi SZ]
gi|189420510|gb|ACD94908.1| cytochrome c biogenesis protein transmembrane region [Geobacter
lovleyi SZ]
Length = 227
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 103/183 (56%), Gaps = 7/183 (3%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGAS 183
+F AG+V+S SPC L+ +PL +G++G + G R + S++F LGL+ T G+ A
Sbjct: 22 VFLAGVVSSASPCVLATIPLVVGFVGGYADG-DRKKAFSYSLSFILGLSLTFTAFGMAAG 80
Query: 184 FAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYL 243
G +G +G +AA +A+VMG ++ + E++LP F P+ V ++L
Sbjct: 81 LLGTMFGTMGGWWYVAAGIVALVMGGQMIGLYEIRLP-IKREFKPKQGGI-----VGSFL 134
Query: 244 AGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQS 303
GL F + +SPC+TPVL +L YVAT L G LL +Y G+ +L A +F G +++
Sbjct: 135 LGLFFGVVSSPCATPVLVVILTYVATKGQMLYGAALLFTYAVGHCLLMLFAGTFTGFIEA 194
Query: 304 LLS 306
+
Sbjct: 195 FVK 197
>gi|406981021|gb|EKE02547.1| hypothetical protein ACD_20C00363G0013 [uncultured bacterium]
Length = 235
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 114/212 (53%), Gaps = 9/212 (4%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGAS 183
+F G++TSLSPCTL +LP+ +GY+G ++ I + F +GL+ L LG+ A+
Sbjct: 25 VFLGGIITSLSPCTLGLLPIIIGYVGGCSENSNKKTAIQITF-FVIGLSLVLTALGITAA 83
Query: 184 FAGKAYG-QIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAY 242
AGKA+G + + L ++MGL+LLEIIE+ +PS + N +S+ Y
Sbjct: 84 IAGKAFGFHANPIWAIVMASLILIMGLSLLEIIEIPMPSII-----KQMPQNKGNSLVLY 138
Query: 243 --LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGA 300
L G FA A+SPCSTPVLA ++ Y + + + GG LL ++ G L++A
Sbjct: 139 PLLIGAAFAFASSPCSTPVLAGIMAYTSLKANIIFGGLLLFFFSLGQGVVLVIAGLSTSL 198
Query: 301 LQSLLSFRKFSSWINPMSGALLLGGGLYTFLD 332
+ + F+ S + SG +L+ Y +L
Sbjct: 199 FKRISYFKSISGYFVKFSGIILIIAASYIYLK 230
>gi|322419909|ref|YP_004199132.1| cytochrome c biogenesis protein transmembrane region [Geobacter sp.
M18]
gi|320126296|gb|ADW13856.1| cytochrome c biogenesis protein transmembrane region [Geobacter sp.
M18]
Length = 228
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 115/214 (53%), Gaps = 10/214 (4%)
Query: 113 LSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLA 172
+SA + +F AG+++S SPC L+ +PL +G++G + G +R + S+AF +GL+
Sbjct: 11 ISAYPLLAFGAVFLAGVISSASPCVLATIPLVVGFVGGYSEG-NRWKAFRYSLAFIVGLS 69
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
T G A G +G +G +AA +A+VMG ++ + E++LP D F P+
Sbjct: 70 LTFTAFGAAAGLLGTMFGTLGGSWYVAAGVVALVMGGQMMGLYEIRLPIRRD-FKPKRGG 128
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
V A+L GL F + +SPC+TP L LL VAT L G LL +Y G+ +L
Sbjct: 129 V-----VGAFLLGLFFGVVSSPCATPALVVLLTLVATKGQVLYGVALLFTYAIGHCLLML 183
Query: 293 LAASFAGALQSLLSFR---KFSSWINPMSGALLL 323
A +F G +++ + + FS W G++++
Sbjct: 184 AAGTFTGFIEAFVKAKGVVNFSLWAKRGGGSVIV 217
>gi|318042287|ref|ZP_07974243.1| putative c-type cytochrome biogenesis protein CcdA [Synechococcus
sp. CB0101]
Length = 238
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 120/205 (58%), Gaps = 5/205 (2%)
Query: 117 SFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLA 176
S ++ ++F GL+TSL PC+LS+LP+TL Y+ F + + S++F G+ +L
Sbjct: 25 SAVTVLLVFAGGLITSLGPCSLSLLPVTLAYLAGFDDQQEKPW--QRSLSFCGGIVASLV 82
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
LLG+ + G+ YGQ+ +P + LA++MGLNLL ++ L + DP P
Sbjct: 83 LLGLASGALGRIYGQVPGLIPTLVAVLAVLMGLNLLGLLPL---QLPNGPDPEQWRQRVP 139
Query: 237 SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
++ AGL F LAASPC+TPVLA LL ++A + +PL G LL ++ G V PLLLA +
Sbjct: 140 KALAPLAAGLAFGLAASPCTTPVLAVLLAWIAQAGEPLAGVVLLTAFAGGQVMPLLLAGT 199
Query: 297 FAGALQSLLSFRKFSSWINPMSGAL 321
A + LL+ R W+ P+SG +
Sbjct: 200 AAAWVPRLLALRALGQWVPPISGVV 224
>gi|148262517|ref|YP_001229223.1| cytochrome c biogenesis transmembrane protein [Geobacter
uraniireducens Rf4]
gi|146396017|gb|ABQ24650.1| cytochrome c biogenesis protein, transmembrane region [Geobacter
uraniireducens Rf4]
Length = 228
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 117/211 (55%), Gaps = 11/211 (5%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGAS 183
+F G+++S SPC L+ +PL +G++G + G R + S+AF LGL+ T G A
Sbjct: 22 VFLGGVLSSASPCVLATIPLVVGFVGGYSEG-DRWKAFRYSLAFILGLSLTFTAFGAAAG 80
Query: 184 FAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYL 243
G +G +G +AA +A+VMG ++ E++LP D + P+ + ++L
Sbjct: 81 LLGTMFGTLGGWWYMAAGVVALVMGGQMMGFYEIRLPIRRD-YKPKQGGI-----IGSFL 134
Query: 244 AGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQS 303
GL F + +SPC+TPVL +L +VA + L G LL +Y G+ +LLA +F G +++
Sbjct: 135 LGLFFGVVSSPCATPVLVVILTFVAGKRQVLYGMALLFTYAVGHCLLMLLAGTFTGFVEA 194
Query: 304 LLSFR---KFSSWINPMSGALL-LGGGLYTF 330
+ + F++ + +SG ++ + GG + +
Sbjct: 195 FVRAKGIADFTARVKKVSGMIITMAGGYFLW 225
>gi|253700501|ref|YP_003021690.1| cytochrome C biogenesis protein transmembrane region [Geobacter sp.
M21]
gi|251775351|gb|ACT17932.1| cytochrome c biogenesis protein transmembrane region [Geobacter sp.
M21]
Length = 228
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 123/219 (56%), Gaps = 10/219 (4%)
Query: 113 LSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLA 172
++A + V+F AG+V+S SPC L+ +PL +GY+G + G R + S+AF LGL+
Sbjct: 11 IAAYPILAFGVVFLAGVVSSASPCVLATIPLVVGYVGGYAEG-DRKKAFRYSLAFVLGLS 69
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
T G A AG +G +G LAA +A+VMG L+ + EL+LP ++ + P+
Sbjct: 70 ATFTAFGAAAGLAGTMFGTLGGWWYLAAGAVALVMGGQLMGLYELRLPLRWE-YRPKQGG 128
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
+ ++L GL F +A+SPC+TPVL LL VAT + G LL +Y G+ +L
Sbjct: 129 V-----IGSFLLGLFFGVASSPCATPVLVVLLTVVATRGEVAYGVALLFTYAIGHCLLML 183
Query: 293 LAASFAGALQSLLSFR---KFSSWINPMSGALLLGGGLY 328
A +F G L+S++ + FS+W ++G ++ G Y
Sbjct: 184 AAGTFVGFLESMVKAKGIVDFSNWTKRIAGVVVAAAGTY 222
>gi|88807366|ref|ZP_01122878.1| putative c-type cytochrome biogenesis protein CcdA [Synechococcus
sp. WH 7805]
gi|88788580|gb|EAR19735.1| putative c-type cytochrome biogenesis protein CcdA [Synechococcus
sp. WH 7805]
Length = 156
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 92/147 (62%), Gaps = 3/147 (2%)
Query: 189 YGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTF 248
YGQ+ +P +GLAIVMGLNLL +I + LP+ DP A + P+ + AGL F
Sbjct: 13 YGQVPGLIPTLVAGLAIVMGLNLLGMIRIPLPA---GPDPMAWSKRVPAPLAPLAAGLAF 69
Query: 249 ALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFR 308
LAASPC+TPVLA LLG++A++ + ++G L S+ G V PLLLA S A +L L++ R
Sbjct: 70 GLAASPCTTPVLAVLLGWIASTGNVVVGILFLSSFGIGQVLPLLLAGSVAASLPKLMALR 129
Query: 309 KFSSWINPMSGALLLGGGLYTFLDRLF 335
S WI +SGA+L+ G T L RL
Sbjct: 130 SVSQWIPSISGAVLITVGSLTLLSRLV 156
>gi|296132004|ref|YP_003639251.1| cytochrome c biogenesis protein transmembrane region [Thermincola
potens JR]
gi|296030582|gb|ADG81350.1| cytochrome c biogenesis protein transmembrane region [Thermincola
potens JR]
Length = 229
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 111/216 (51%), Gaps = 4/216 (1%)
Query: 113 LSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLA 172
L S ++ ++F G+VTS+ PC +S++P+ + Y+G S ++A+ S F+LG +
Sbjct: 13 LQGYSLLAMVLVFWGGIVTSIGPCNMSMIPVLMAYVGG-TSDANKARSFWLSFFFTLGTS 71
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
TT ALLGV SF G +G L A+ +++ +GL +L II LP+ R
Sbjct: 72 TTFALLGVIVSFIGGIFGASKALLMYIAAAVSVTVGLKMLGIINFNLPNIGSRILRRPQR 131
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
+ A+L GL LA S C TPVL +L V + + G LL Y G P++
Sbjct: 132 QGIWA---AFLMGLLIGLAGSQCGTPVLFAILSLVMSKGKIIYGAVLLFLYGMGRGLPVI 188
Query: 293 LAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLY 328
+A +F G + L +++ +G +L+G GLY
Sbjct: 189 IAGTFTGFAKGLPGLSRWAGAFEKTAGIILIGIGLY 224
>gi|413925302|gb|AFW65234.1| hypothetical protein ZEAMMB73_043818 [Zea mays]
Length = 190
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/65 (76%), Positives = 56/65 (86%)
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFA 298
VQAYL GLTF L+A PCSTP+LATLLGYVATS+DP+IGG+LLL+YTTGYVA L ASFA
Sbjct: 106 VQAYLDGLTFVLSALPCSTPILATLLGYVATSRDPIIGGSLLLTYTTGYVARLPTIASFA 165
Query: 299 GALQS 303
ALQ
Sbjct: 166 RALQK 170
>gi|118578595|ref|YP_899845.1| cytochrome c biogenesis protein, transmembrane region [Pelobacter
propionicus DSM 2379]
gi|118501305|gb|ABK97787.1| cytochrome c biogenesis protein, transmembrane region [Pelobacter
propionicus DSM 2379]
Length = 228
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 108/213 (50%), Gaps = 10/213 (4%)
Query: 113 LSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLA 172
++A +L +F AG+++S SPC LS +PL +G++G + G R + S+ F +GL+
Sbjct: 11 IAAYPLLALGAVFLAGVISSASPCVLSTIPLVVGFVGGYSDG-DRWKAFRYSLMFIIGLS 69
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
T G A G +G +G A +A+VMG L+ + ++ P D F P+
Sbjct: 70 LTFTAFGAAAGVLGTIFGVVGGWWYGVAGAVALVMGGQLMGLYTIRQPVKPD-FKPKKGG 128
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
A++ GL F L +SPC+TPV+ LL VA L G TL+ SY G+ +L
Sbjct: 129 MY-----GAFILGLFFGLVSSPCATPVMVVLLTVVAGKGQVLYGITLMFSYAVGHCMLML 183
Query: 293 LAASFAGALQSLLSFRKF---SSWINPMSGALL 322
A +F G +++ R S+W SG ++
Sbjct: 184 AAGTFTGFVEAFFKTRGVLNASAWSRKASGIII 216
>gi|39998049|ref|NP_954000.1| thiol:disulfide interchange protein [Geobacter sulfurreducens PCA]
gi|409913406|ref|YP_006891871.1| thiol:disulfide interchange protein [Geobacter sulfurreducens
KN400]
gi|39984994|gb|AAR36350.1| thiol:disulfide interchange protein [Geobacter sulfurreducens PCA]
gi|298506991|gb|ADI85714.1| thiol:disulfide interchange protein [Geobacter sulfurreducens
KN400]
Length = 228
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 116/221 (52%), Gaps = 11/221 (4%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLAL 177
F + +F G+++S SPC L+ +PL +G++G + + +SR + S++F +GL+ T +
Sbjct: 16 FLAFVAVFVGGVLSSASPCVLATIPLVVGFVGGYAA-ESRKKAFLYSLSFIVGLSLTFTI 74
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
G A+ G +G +G A +A+ MGL ++ EL+LP F P+
Sbjct: 75 FGAAAALLGTMFGTVGGWWYAAVGAVAVAMGLQMMGFYELRLPVL-PQFRPKRGGFW--- 130
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
A L GL F +A+SPC+TPVL +L + A + L G LL +Y G+ +L A +F
Sbjct: 131 --GALLLGLFFGVASSPCATPVLVVILSFAALQGNILYGTLLLFTYALGHCLLMLAAGTF 188
Query: 298 AGALQSLLSFR---KFSSWINPMSGALLLGGGLYTFLDRLF 335
G +++ + R S W SGA++ G + F+ R F
Sbjct: 189 TGFVEAFAASRGVANVSHWAKRGSGAVIALAGAW-FIWRAF 228
>gi|118579291|ref|YP_900541.1| cytochrome c biogenesis protein, transmembrane region [Pelobacter
propionicus DSM 2379]
gi|118502001|gb|ABK98483.1| cytochrome c biogenesis protein, transmembrane region [Pelobacter
propionicus DSM 2379]
Length = 228
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 110/211 (52%), Gaps = 11/211 (5%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGAS 183
+F AG+++S SPC L+ +PL +G++G + G R + S+AF LGL+ T G A
Sbjct: 22 VFCAGVLSSASPCVLATIPLVVGFVGGYSDG-DRGKAFRYSLAFILGLSLTFTAFGAAAG 80
Query: 184 FAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYL 243
G +G +G L A +A+ MG ++ + E++LP D + P+ A+L
Sbjct: 81 LLGTMFGALGGPWHLVAGVIALAMGGQMMGLYEIRLPVRRD-YKPKQGGL-----AGAFL 134
Query: 244 AGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQS 303
GL F + +SPC+TPVL LL VA L G LL Y G+ +L A +F G ++
Sbjct: 135 LGLFFGVVSSPCATPVLVLLLTLVAGKGQVLYGTALLFCYAIGHCLLMLFAGTFTGFVEG 194
Query: 304 LLSFR---KFSSWINPMSGALL-LGGGLYTF 330
R FSSW +SG ++ L GG + +
Sbjct: 195 FAKARGVVNFSSWSKRISGGVIALAGGWFVW 225
>gi|328953292|ref|YP_004370626.1| cytochrome c biogenesis protein transmembrane region [Desulfobacca
acetoxidans DSM 11109]
gi|328453616|gb|AEB09445.1| cytochrome c biogenesis protein transmembrane region [Desulfobacca
acetoxidans DSM 11109]
Length = 231
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 108/205 (52%), Gaps = 9/205 (4%)
Query: 128 GLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGK 187
G++ + SPC L+ +PL +G++G + +G+++ + S+ F LGLA +ALLG AS G
Sbjct: 26 GMLATASPCILASIPLVIGFVGGY-AGENKKRAFFYSLTFVLGLAFIMALLGAMASLMGT 84
Query: 188 AYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLT 247
+G G +G+ I+MGL+L +I L+L + R A++ GL
Sbjct: 85 MFGMHGPVWNFILAGVLIIMGLHLAGVIHLKLETSQKLIPQRTGLLG------AFILGLL 138
Query: 248 FALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSF 307
F SPC++PVLA +L A + + G +LL +Y G ++LA +F G L+S L+
Sbjct: 139 FGTVLSPCASPVLAVILTLAAVQQKVVYGSSLLFAYALGQGTLIILAGTFTGVLESFLAS 198
Query: 308 R--KFSSWINPMSGALLLGGGLYTF 330
+ I +G LL G+Y F
Sbjct: 199 KGSNLGVSIQRTAGGLLFLAGMYVF 223
>gi|78044353|ref|YP_359941.1| thioredoxin [Carboxydothermus hydrogenoformans Z-2901]
gi|77996468|gb|ABB15367.1| thioredoxin domain selenoprotein/cytochrome C biogenesis family
protein [Carboxydothermus hydrogenoformans Z-2901]
Length = 395
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 104/325 (32%), Positives = 145/325 (44%), Gaps = 23/325 (7%)
Query: 12 SRISCHQRSTAYGKQMAPGVSV--HKSHSVAKKSIRCFSTNTFLSTLTVANLAAIGNAKA 69
SR Q + +G Q P V + V + F+ LT L A + A
Sbjct: 91 SRQDSQQLAAKFGIQYVPTFIVVDQNGNIVPWTDAQGNQMPMFVGGLTKEELKAQMDKVA 150
Query: 70 LTMENVLEGAASVYTMADGSLGDMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGL 129
L + E L D G S Q + + G L +L V+F G+
Sbjct: 151 LKEKKTPE------------LND--SGKKKSFAQTLADKLPGLLGDSKLLALFVVFLGGI 196
Query: 130 VTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAY 189
TS +PC L ++PL +GY G + +G+S A+ S+ F LGLATTL LLGVG G
Sbjct: 197 ATSFTPCILGMIPLIIGYTGGY-AGRSPAKGFIYSLFFVLGLATTLTLLGVGIGVLGTFI 255
Query: 190 GQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFA 249
+AI+MG ++ + LP P F S YL GL F
Sbjct: 256 KSRLFAFNFILGIVAILMGFAVMGFYTINLPGL--KRMPVKGTGLFSS----YLMGLFFG 309
Query: 250 LAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRK 309
L+ASPC+TPVL ++ Y PL GG LL SY+ G+ PL+LA +F+ L + S +
Sbjct: 310 LSASPCATPVLIVIVTYALAKASPLFGGALLFSYSFGHGLPLILAGTFSAFLGKITSLGR 369
Query: 310 FSSWINPMSGALLLGGGLYTFLDRL 334
+ IN + G +L+ GLY RL
Sbjct: 370 YGEIINYIFGGILVLYGLYLLFGRL 394
>gi|222056584|ref|YP_002538946.1| cytochrome c biogenesis protein transmembrane region [Geobacter
daltonii FRC-32]
gi|221565873|gb|ACM21845.1| cytochrome c biogenesis protein transmembrane region [Geobacter
daltonii FRC-32]
Length = 228
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 109/211 (51%), Gaps = 12/211 (5%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
+ +F AG+++S SPC L+ +PL +G++G + G R + S+AF LGL+ T G
Sbjct: 18 AFGAVFLAGVLSSASPCVLATIPLVVGFVGGYSDG-DRMKAFRYSLAFILGLSLTFTAFG 76
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
A G +G +G L A +A+VMG ++ E++LP NF P+ +
Sbjct: 77 AAAGLLGTMFGTLGGPWYLIAGTIALVMGGQMMGFYEIRLPVK-RNFKPKRGGI-----I 130
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
+L GL F + +SPC+TPVL LL VA L G LL Y G+ +L A + G
Sbjct: 131 GTFLLGLFFGIVSSPCATPVLVVLLTLVAGKGQVLYGIALLFCYAIGHCLLMLFAGTCTG 190
Query: 300 ALQSLLSFR---KFSSWINPMSGAL--LLGG 325
++ + R FS+W +SG + L+GG
Sbjct: 191 FVEGFVKARGVVNFSAWAKRVSGGVVALIGG 221
>gi|411116579|ref|ZP_11389066.1| cytochrome c biogenesis protein [Oscillatoriales cyanobacterium
JSC-12]
gi|410712682|gb|EKQ70183.1| cytochrome c biogenesis protein [Oscillatoriales cyanobacterium
JSC-12]
Length = 310
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 114/216 (52%), Gaps = 13/216 (6%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASF 184
F GLV S+SPC LS+LP+ L YIG SR + +F G+ T L+LLG+ +SF
Sbjct: 83 FLGGLVASISPCILSLLPINLSYIGT-QEIYSRRDAFVKAFSFVCGVVTVLSLLGLFSSF 141
Query: 185 AGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPS--FFDNFDPRAAA----ANFPSS 238
AG + Q +A + ++MGL L ++I + LP + + + A +++ ++
Sbjct: 142 AGFVFVQFRGYFHVAVGIVIVLMGLTLADVICIPLPQNRWLTVLNQSSLAPSPKSHWRNT 201
Query: 239 VQA-----YLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
+Q Y GLTFAL +SPC++PV+ ++L + L ++SY GY A + L
Sbjct: 202 LQTQCLGPYSVGLTFALVSSPCTSPVMVSVLTAATATGSQLQSTLAMVSYALGYTAIIFL 261
Query: 294 AASFAGALQSLLSFRKFSSWINPM-SGALLLGGGLY 328
A+ F G ++ S +SS I + S LLL G Y
Sbjct: 262 ASLFTGLVKQTRSLLTYSSTIVRIASVVLLLTGSFY 297
>gi|84686970|ref|ZP_01014853.1| sulfur oxidation V protein [Maritimibacter alkaliphilus HTCC2654]
gi|84664944|gb|EAQ11425.1| sulfur oxidation V protein [Rhodobacterales bacterium HTCC2654]
Length = 246
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 113/214 (52%), Gaps = 26/214 (12%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD--------------SIAFSLGLA 172
AGLV +PC L ++P L Y+ +G S AQ+ G+ ++ F+LG+
Sbjct: 13 AGLVAFFTPCILPMVPFYLSYM----AGISMAQLTGEGDIQPGAQRRLVVSALFFALGVT 68
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
T LLG+GA+ AG+A+ Q L A+ + V GL+ L +I + F + R +
Sbjct: 69 TIFGLLGLGATAAGQAFAQWKQELSWIAAAVIFVFGLHFLHVIRIP----FLMREARMQS 124
Query: 233 ANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLI-GGTLLLSYTTGYVAP 290
PS+ V AY+ GL F + C PVLA++L +A KD L GG+LL+++ G AP
Sbjct: 125 KADPSTIVGAYVMGLAFGFGWTACVGPVLASIL-MIAAMKDSLWQGGSLLITFGLGMTAP 183
Query: 291 LLLAASFAGALQSLLSF-RKFSSWINPMSGALLL 323
++AA FA + ++ RK+ ++ + G +L+
Sbjct: 184 FVIAAVFAKPFLAFMARNRKYMPYVEKVMGVMLI 217
>gi|223992609|ref|XP_002285988.1| cytochrome c biogenesis protein precursor [Thalassiosira pseudonana
CCMP1335]
gi|220977303|gb|EED95629.1| cytochrome c biogenesis protein precursor [Thalassiosira pseudonana
CCMP1335]
Length = 280
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 128/226 (56%), Gaps = 29/226 (12%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASF 184
+ AGL TS SPC+L +LP+T+ YI + + I +I+F++GLA LGV AS
Sbjct: 48 YTAGLWTSFSPCSLGLLPITVSYITTAANERRDKNTILPTISFAIGLALVFTALGVSASA 107
Query: 185 AGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLA 244
G +G +G A+S +++VMGL LLE+I + LP+ +N D RA S ++ +L
Sbjct: 108 LGGVFGSSNSGSSAASSLVSVVMGLQLLELINVPLPN--NNNDERA------SLLRIFLL 159
Query: 245 GLTFALAASPCSTPVLATLLGYVATSK--------DPLIGGTLLLSYTTGYVAPLLLAAS 296
G T AL ASPC+TPVLA+LL Y+A++ D G +LSYT GY PLL+ +
Sbjct: 160 GGTSALVASPCATPVLASLLAYLASASSSMAASSGDVSKGAAWMLSYTLGYCTPLLIVGA 219
Query: 297 FAGALQSLLSFRKFS-----------SWINPMSGALLLGGGLYTFL 331
G Q+L++ +K S W+ P++G +L+ G+ FL
Sbjct: 220 TGG--QALVNLQKDSVDGQGIGSWLGQWVTPLTGGVLIVFGMNGFL 263
>gi|296109196|ref|YP_003616145.1| cytochrome c biogenesis protein transmembrane region
[methanocaldococcus infernus ME]
gi|295434010|gb|ADG13181.1| cytochrome c biogenesis protein transmembrane region
[Methanocaldococcus infernus ME]
Length = 213
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 114/219 (52%), Gaps = 19/219 (8%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
L +IF +G++++LSPC LS+LPL L YI FG K + + +S+ F LG + +LLG
Sbjct: 2 DLIIIFISGILSALSPCVLSILPLALLYI--FGVSKDKYDSLLNSLFFILGFSFMFSLLG 59
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP--- 236
+ F+ Y T L AS L+ + GL+L+ +L S + R N
Sbjct: 60 I--LFSAFGYFVNVTILKYLASLLSSIFGLSLILNYNFKLFS-----EERGKVYNKIIKI 112
Query: 237 ------SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAP 290
S + ++L GL+F+L A+ CSTP+L ++L YVAT KD + G L Y+ G+ P
Sbjct: 113 ANSKKLSFLSSFLFGLSFSLVANICSTPILISILSYVATKKDLIFGFLSLFIYSIGFSLP 172
Query: 291 LLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYT 329
+ + + G + L + +N +SG +L+ +Y
Sbjct: 173 IFIFSIIGGKGKEFLE-KMNPKVVNIISGIILIFLSIYI 210
>gi|428309217|ref|YP_007120194.1| cytochrome c biogenesis protein [Microcoleus sp. PCC 7113]
gi|428250829|gb|AFZ16788.1| cytochrome c biogenesis protein [Microcoleus sp. PCC 7113]
Length = 286
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 109/217 (50%), Gaps = 11/217 (5%)
Query: 98 LYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR 157
++S + E + Q +A L + F GL+ S+SPC + +L + L YIG SR
Sbjct: 52 VFSLEENYKEWLGKQNTANPLILLLLAFVGGLIGSISPCHIGLLTVNLTYIGT-REVTSR 110
Query: 158 AQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL 217
+ +F LG+ T L+LLG+ +SFAG + + + ++MGL LLEII L
Sbjct: 111 RDAFVKAASFVLGVVTVLSLLGLVSSFAGAVMRDYRGHVNIVVGLVVLLMGLTLLEIIRL 170
Query: 218 QLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
LP F A P + Y AG+TFAL +SPC++PVL ++L A + +
Sbjct: 171 PLPQF---------GAALPIT-GPYTAGVTFALVSSPCASPVLFSVLTAAAATGSQVQST 220
Query: 278 TLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWI 314
++SY G A + A+ F G + + K+S WI
Sbjct: 221 LTMVSYALGTSALIFFASLFTGLAKQARTLVKYSEWI 257
>gi|134298424|ref|YP_001111920.1| cytochrome c biogenesis protein, transmembrane region
[Desulfotomaculum reducens MI-1]
gi|134051124|gb|ABO49095.1| cytochrome c biogenesis protein, transmembrane region
[Desulfotomaculum reducens MI-1]
Length = 223
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAG 186
AGL + +SPCTL + + Y+G + + +SR + S++F LGL+ TLA+ G S G
Sbjct: 22 AGLFSGISPCTLPTAVMVVAYVGGYDN-RSRLKGFILSLSFVLGLSLTLAIAGAVVSAVG 80
Query: 187 KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ------ 240
+ LAA +A++MG NLL + +LP F N P+ V+
Sbjct: 81 GLFMGSKVVWYLAAL-VAVLMGANLLGL--FKLPGFGVN----------PTGVKQGSGVL 127
Query: 241 -AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
A+L G+ FA+ ASPC+ P+ AT+L Y AT G TLL +Y G PLL A +F
Sbjct: 128 GAFLLGIPFAIIASPCTAPITATVLAYAATKGSVWYGFTLLFAYAIGRSIPLLAAGTFTS 187
Query: 300 ALQSLLSFRKFSSWINPMSGALLLGGGLY 328
L++ F FS + +SG L+G G Y
Sbjct: 188 VLKNASKFENFSLVVQRISGMALIGLGFY 216
>gi|85860547|ref|YP_462749.1| thiol:disulfide interchange protein [Syntrophus aciditrophicus SB]
gi|85723638|gb|ABC78581.1| thiol:disulfide interchange protein [Syntrophus aciditrophicus SB]
Length = 238
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 110/198 (55%), Gaps = 8/198 (4%)
Query: 111 GQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLG 170
G ++ SF + + GL+ S +PC V+PL + YIGA GS +SR S+ + LG
Sbjct: 11 GYMADSSFAAYLAAYLGGLLVSFTPCVYPVMPLVIAYIGARGS-RSRLYGFLLSLTYVLG 69
Query: 171 LATTLALLGVGASFAGKAYGQIGTGLPLA--ASGLAIVMGLNLLEI--IELQLPSFFDNF 226
L+ T A+LG ++ G+ +G I + +A + + I+MGL +L++ I++++P F +
Sbjct: 70 LSLTYAVLGGISALTGRLFGTIQSSFWVAFLVANVCILMGLAMLDVFTIQIRIPGFATS- 128
Query: 227 DPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTG 286
P+ + S + ++L G+T L PCS PV + LL YVAT ++ G +LL + G
Sbjct: 129 -PQTGDMH-KSVIGSFLVGITSGLLIGPCSAPVFSVLLAYVATRQNLFFGMSLLFVFALG 186
Query: 287 YVAPLLLAASFAGALQSL 304
L+ SFAG + SL
Sbjct: 187 MGTLLVAIGSFAGLMASL 204
>gi|427737112|ref|YP_007056656.1| cytochrome c biogenesis protein [Rivularia sp. PCC 7116]
gi|427372153|gb|AFY56109.1| cytochrome c biogenesis protein [Rivularia sp. PCC 7116]
Length = 270
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 101/209 (48%), Gaps = 12/209 (5%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGV 180
+ + F GL+ S+SPC LS+LP+ L YIG +SR + F LG + +L G+
Sbjct: 64 IPIAFIGGLIASISPCILSLLPVNLSYIGTLNI-ESRKDAFFKASFFVLGAVSIFSLFGL 122
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
A+FA + + + ++MGL+ I L LP + P
Sbjct: 123 FAAFASSVMVDFRGYINVVVGAIILLMGLSFAGIFHLPLPK-------KQVRIPVPGP-- 173
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGA 300
+ AGLTFAL SPC++PVL +L A S ++ ++SY GY A + A+ F G
Sbjct: 174 -FGAGLTFALVTSPCASPVLFAVLATAAASGSQVLSTVTMISYALGYTAVIFFASLFTGL 232
Query: 301 LQSLLSFRKFSSWINPM-SGALLLGGGLY 328
++ S WI + SGAL+L GG Y
Sbjct: 233 VKQRQVLLTKSQWIIRLGSGALILAGGFY 261
>gi|159045349|ref|YP_001534143.1| cytochrome c biogenesis protein [Dinoroseobacter shibae DFL 12]
gi|157913109|gb|ABV94542.1| cytochrome c biogenesis protein [Dinoroseobacter shibae DFL 12]
Length = 244
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGK----------SRAQIIGDSIAFSLGLATTLA 176
AGL++ LSPC L ++P L Y+ G + R + + ++AFS G+ T
Sbjct: 12 AGLLSFLSPCILPIVPFYLSYMAGVGMNQLEQDTEITPAIRTRAVLSALAFSAGVITIFV 71
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
+G GAS G+ GQ L A+ L MGL+ L +I + + F A +
Sbjct: 72 AMGAGASAFGQVLGQYMDVLRWVAAALIATMGLHFLGVIRIGF--LYRQFRMEAGSTTNM 129
Query: 237 SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPLLLAA 295
S + AYL GL FA +PC PVLA +L VAT + G LLL+ Y G P +LAA
Sbjct: 130 SFLGAYLIGLAFAFGWTPCVGPVLAAILFTVATEGTGMTRGMLLLTVYGVGMTLPFVLAA 189
Query: 296 SFAGA-LQSLLSFRKFSSWINPMSGALLL 323
F G L+ + FR+ I +G L+
Sbjct: 190 LFIGPFLRWMRGFRRHLGRIEKATGVFLV 218
>gi|428300851|ref|YP_007139157.1| cytochrome c biogenesis protein transmembrane region [Calothrix sp.
PCC 6303]
gi|428237395|gb|AFZ03185.1| cytochrome c biogenesis protein transmembrane region [Calothrix sp.
PCC 6303]
Length = 283
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 111/226 (49%), Gaps = 24/226 (10%)
Query: 112 QLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGL 171
Q +A F L + F G + S+SPC L++LP+ L YIG KSR + F LG
Sbjct: 66 QDTANPFVLLPLAFAGGAIASVSPCILALLPVNLSYIGTLNI-KSRWDAFTKAGLFVLGA 124
Query: 172 ATTLALLGVGASFAG------KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDN 225
T L+L G+ +SFAG + Y I GL +A VMGL L+ ++ + LP N
Sbjct: 125 VTILSLFGLVSSFAGTVMVEYRGYINIVVGLIMA------VMGLWLMGVVNIPLPQMNVN 178
Query: 226 FDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTT 285
P+A Y GLTFAL +SPC++PVL +L A + ++G ++SY
Sbjct: 179 L-PKAGP---------YGVGLTFALVSSPCASPVLFAVLASAAATGSQVLGTLTMISYAL 228
Query: 286 GYVAPLLLAASFAG-ALQSLLSFRKFSSWINPMSGALLLGGGLYTF 330
GY + LA+ F G A QS I S AL+L G Y F
Sbjct: 229 GYTLLIFLASLFTGLAKQSRSLLNHSEGIIRFGSVALILTGVYYLF 274
>gi|422328179|ref|ZP_16409206.1| hypothetical protein HMPREF0981_02526 [Erysipelotrichaceae
bacterium 6_1_45]
gi|371661456|gb|EHO26684.1| hypothetical protein HMPREF0981_02526 [Erysipelotrichaceae
bacterium 6_1_45]
Length = 230
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 116/207 (56%), Gaps = 10/207 (4%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAG 186
AG++TS++PC+LS +PL +GY+G G ++ I +I FSLG A T LLG+ A+ AG
Sbjct: 27 AGILTSVTPCSLSNVPLIIGYVGGVGEKNTKRAFIYSAI-FSLGTAVTFVLLGIIATSAG 85
Query: 187 KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGL 246
+ G + L L ++M L + EI +PS N + F + A+LAG+
Sbjct: 86 RLMGTSSSIWYLLLGVLMVLMALQIWEIFNF-IPSI--NLLSKNKKRGF---IGAFLAGI 139
Query: 247 TFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLS 306
+ +SPCSTPVL +L VA + + G L+L Y+ G+ +++A + G +Q + S
Sbjct: 140 LGGIFSSPCSTPVLIAMLAIVAGEGNLVWGIILMLLYSIGHSTLVMVAGTSVGFIQKINS 199
Query: 307 ---FRKFSSWINPMSGALLLGGGLYTF 330
++K ++ + + GA++L GLY F
Sbjct: 200 SDNYKKTATILKIVIGAVILLIGLYMF 226
>gi|404495373|ref|YP_006719479.1| thiol:disulfide interchange protein [Geobacter metallireducens
GS-15]
gi|418065563|ref|ZP_12702935.1| cytochrome c biogenesis protein transmembrane region [Geobacter
metallireducens RCH3]
gi|78192992|gb|ABB30759.1| thiol:disulfide interchange protein [Geobacter metallireducens
GS-15]
gi|373561948|gb|EHP88170.1| cytochrome c biogenesis protein transmembrane region [Geobacter
metallireducens RCH3]
Length = 228
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 114/215 (53%), Gaps = 11/215 (5%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGAS 183
+F G+++S SPC L+ +PL +G++G +G+SR + S++F +GL+ T + G A+
Sbjct: 22 VFMGGVLSSASPCVLATIPLVVGFVGGH-AGESRKKAFLYSLSFIIGLSLTFTIFGAAAA 80
Query: 184 FAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYL 243
G +G +G +A +A+ MGL +L + +L LP+ F P+ + +
Sbjct: 81 LLGTMFGTVGGWWYVAVGAVAVAMGLQMLGLYDLNLPAL-PQFRPKRGGLVGALLLGLF- 138
Query: 244 AGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQS 303
F +A+SPC+TPVL +L + A + L G LL +Y G+ +L A +F G +++
Sbjct: 139 ----FGVASSPCATPVLVVILSFAALKGNILDGTFLLFTYALGHCLLMLAAGTFTGFVEA 194
Query: 304 LLSFR---KFSSWINPMSGALLLGGGLYTFLDRLF 335
+ R S W +SG ++ G + F+ R F
Sbjct: 195 FAASRGVADISLWGKRVSGFIIALAGAW-FIWRAF 228
>gi|357025320|ref|ZP_09087448.1| cytochrome c-type biogenesis protein CcdA [Mesorhizobium amorphae
CCNWGS0123]
gi|355542802|gb|EHH11950.1| cytochrome c-type biogenesis protein CcdA [Mesorhizobium amorphae
CCNWGS0123]
Length = 248
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 102/216 (47%), Gaps = 16/216 (7%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYI------------GAFGSGKSRAQIIGDSIAFSLGLAT 173
GAG ++ LSPC L ++P L Y+ GA +R +I SIAF LG +T
Sbjct: 12 GAGAISFLSPCVLPLVPPYLCYMAGVSVDDFRGDAGATAKAGARGALIASSIAFVLGFST 71
Query: 174 TLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAA 233
LG GAS G L +AA L I+MGLN L I+ + L S F + A
Sbjct: 72 VFVALGAGASTIGHWLRVWQEQLAMAAGVLIILMGLNFLGILRIPLLSREARFQSQGKPA 131
Query: 234 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
S + AY+ GL FA +PC PVL +L + G LL +Y+ G P L+
Sbjct: 132 ---SLIAAYVMGLAFAFGWTPCIGPVLGPILTLAGGRETVGEGALLLAAYSLGLGIPFLI 188
Query: 294 AASFAGALQSLL-SFRKFSSWINPMSGALLLGGGLY 328
AA F+GA L FR + GALL+ G++
Sbjct: 189 AALFSGAFMRFLGKFRVHLGRVEKAIGALLVVAGVF 224
>gi|426405150|ref|YP_007024121.1| thiol:disulfide interchange protein [Bdellovibrio bacteriovorus
str. Tiberius]
gi|425861818|gb|AFY02854.1| thiol:disulfide interchange protein [Bdellovibrio bacteriovorus
str. Tiberius]
Length = 600
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 111/223 (49%), Gaps = 13/223 (5%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGV 180
L +F AG+ TS +PC ++P+TL +G + ++R Q S + LG+ATT +LLG+
Sbjct: 195 LIFVFFAGIFTSFTPCIFPMIPITLAVLGNHSNERTRLQNFFTSCIYVLGIATTYSLLGL 254
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIV---MGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
A+ +G +G G P + + ++ M L++ + +LQ+P+F N R
Sbjct: 255 AAASSGGLFGA-SLGNPYVLTVVCVIFLAMALSMYGLYDLQVPAFLRNKLGRGTKKQ--G 311
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
+ YL GL + ASPC PVL +L YVA++++ ++G L Y G ++ F
Sbjct: 312 VIGVYLTGLFAGIVASPCVGPVLVAILTYVASTQNKMLGFLYLFVYALGLGLIFIVLGLF 371
Query: 298 AGALQSLLSFRKFSSWINPMS---GALLLGGGLYTFLDRLFPT 337
SL + W+N G L+L Y +L+ L PT
Sbjct: 372 NQLANSL---PRSGPWMNAFKFILGTLML-SAFYYYLELLLPT 410
>gi|406935644|gb|EKD69555.1| hypothetical protein ACD_47C00076G0001 [uncultured bacterium]
Length = 233
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 110/214 (51%), Gaps = 9/214 (4%)
Query: 120 SLAVI--FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLAL 177
+LAV+ F GL+T+ +PC L+++PL LG++G + K + + S+ F +GL T
Sbjct: 20 ALAVVAAFFGGLLTASNPCVLAMVPLMLGFVGGYDELKGLKKSLTFSLLFVIGLGITFTA 79
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
+G+ A+ GK +G +G G+ ++M L+L +IE + +
Sbjct: 80 MGLFAAAFGKLFGDVGRYWNYIIFGICVLMALHLWGLIEFKS----GKLAGLTSKVKHKG 135
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
+ A L G F + ++PC+ PVLA +L Y+ GG LL +Y G+ +++A +
Sbjct: 136 WLGAILLGALFGVVSAPCAVPVLAVILAYMVKGGSMTYGGILLFAYAVGHSVLIVIAGTS 195
Query: 298 AGALQSLLSFRKF---SSWINPMSGALLLGGGLY 328
GA Q+LLS K + ++ L+LG G+Y
Sbjct: 196 FGAAQALLSSEKLAYANKVFKHVAAVLILGVGVY 229
>gi|119486023|ref|ZP_01620085.1| hypothetical protein L8106_05865 [Lyngbya sp. PCC 8106]
gi|119456798|gb|EAW37926.1| hypothetical protein L8106_05865 [Lyngbya sp. PCC 8106]
Length = 283
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 117/235 (49%), Gaps = 24/235 (10%)
Query: 103 QQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIG 162
Q + + Q +A F L + F G++ S+SPC L++LP+ L YIG KS+ +
Sbjct: 57 NQYQQWFIQQNTANPFVLLPLAFLGGVLASVSPCILALLPVNLSYIGTLKI-KSQWDALT 115
Query: 163 DSIAFSLGLATTLALLGVGASFAG------KAYGQIGTGLPLAASGLAIVMGLNLLEIIE 216
+ F LG T L+L G+ +SFAG + Y I GL +A VMGL L+ +++
Sbjct: 116 KAGLFVLGAVTILSLFGLVSSFAGALMVEYRGYINIIVGLLMA------VMGLWLVGVVQ 169
Query: 217 LQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIG 276
L LP N P + Y GLTFAL +SPC++PVL +L A + ++G
Sbjct: 170 LPLPQ---------TNVNLPGA-GPYGVGLTFALVSSPCASPVLFAVLASAAATGSQILG 219
Query: 277 GTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPM-SGALLLGGGLYTF 330
++SY GY + LA+ F G ++ + S I S AL+L G Y F
Sbjct: 220 TLTMVSYALGYTLLIFLASLFTGLIKQSRQLLQHSEGIIRFGSVALILTGIYYLF 274
>gi|319783824|ref|YP_004143300.1| cytochrome C biogenesis protein transmembrane region [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317169712|gb|ADV13250.1| cytochrome c biogenesis protein transmembrane region [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 248
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 103/216 (47%), Gaps = 16/216 (7%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYI------------GAFGSGKSRAQIIGDSIAFSLGLAT 173
GAG ++ LSPC L ++P L Y+ GA +R +I SIAF LG +T
Sbjct: 12 GAGAISFLSPCVLPLVPPYLCYMAGVSVDDFRGNAGATAREGARGALIYSSIAFVLGFST 71
Query: 174 TLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAA 233
LG GAS G+ L + A L I+MGLN L ++ + L S F + A
Sbjct: 72 VFVALGAGASTIGRLLRVWQEPLAMGAGVLIILMGLNFLGVLRIPLLSREARFQSQGKPA 131
Query: 234 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
S+V AY+ GL FA +PC PVL +L + G LL +Y+ G P L+
Sbjct: 132 ---SAVAAYVMGLAFAFGWTPCIGPVLGPILTLAGGRETVGEGALLLAAYSLGLGIPFLI 188
Query: 294 AASFAGALQSLL-SFRKFSSWINPMSGALLLGGGLY 328
AA F+GA L FR + GALL+ G++
Sbjct: 189 AALFSGAFMRFLGKFRVHLGRVEKAIGALLVIAGVF 224
>gi|13470987|ref|NP_102556.1| cytochrome C biogenesis protein [Mesorhizobium loti MAFF303099]
gi|14021730|dbj|BAB48342.1| c-type cytochrome biogenesis protein [Mesorhizobium loti
MAFF303099]
Length = 248
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 102/216 (47%), Gaps = 16/216 (7%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYI------------GAFGSGKSRAQIIGDSIAFSLGLAT 173
GAG ++ LSPC L ++P L Y+ G +R ++ SIAF LG +T
Sbjct: 12 GAGAISFLSPCVLPLVPPYLCYMAGVSVDDFRGDAGVTAREGTRGALLYSSIAFVLGFST 71
Query: 174 TLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAA 233
LG GAS G+ L + A L I+MGLN L I+ + L S F + A
Sbjct: 72 VFVALGAGASTIGRLLRVWQEPLAMGAGVLIILMGLNFLGILRIPLLSREARFQSQGKPA 131
Query: 234 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
N ++ AY+ GL FA +PC PVL +L + G LL +Y+ G P L+
Sbjct: 132 N---AIAAYIMGLAFAFGWTPCIGPVLGPILTLAGGRETVGEGALLLAAYSLGLGIPFLI 188
Query: 294 AASFAGALQSLL-SFRKFSSWINPMSGALLLGGGLY 328
AA F+GA L FR + GALL+ G++
Sbjct: 189 AAVFSGAFMRFLGKFRVHLGRVEKAIGALLVVAGVF 224
>gi|337268584|ref|YP_004612639.1| cytochrome c biogenesis protein transmembrane subunit
[Mesorhizobium opportunistum WSM2075]
gi|336028894|gb|AEH88545.1| cytochrome c biogenesis protein transmembrane region [Mesorhizobium
opportunistum WSM2075]
Length = 248
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 103/216 (47%), Gaps = 16/216 (7%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYI------------GAFGSGKSRAQIIGDSIAFSLGLAT 173
GAG ++ LSPC L ++P L Y+ GA +R ++ SIAF LG +T
Sbjct: 12 GAGAISFLSPCVLPLVPPYLCYMAGVSVDDFRGNAGATAREGTRGALLYSSIAFVLGFST 71
Query: 174 TLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAA 233
LG GAS G+ L + A L I+MGLN L I+ + L S F + A
Sbjct: 72 VFVALGAGASTIGRLLRVWQEPLAMGAGVLIILMGLNFLGILRIPLLSREARFQSQGKPA 131
Query: 234 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
S+V AY+ GL FA +PC PVL +L + G LL +Y+ G P L+
Sbjct: 132 ---SAVAAYVMGLAFAFGWTPCIGPVLGPILTLAGGRETVGEGALLLAAYSLGLGIPFLI 188
Query: 294 AASFAGALQSLL-SFRKFSSWINPMSGALLLGGGLY 328
AA F+GA L FR + GALL+ G++
Sbjct: 189 AALFSGAFMRFLGKFRVHLGRVEKAIGALLVVAGVF 224
>gi|90419661|ref|ZP_01227571.1| cytochrome c-type biogenesis protein CcdA [Aurantimonas
manganoxydans SI85-9A1]
gi|90336598|gb|EAS50339.1| cytochrome c-type biogenesis protein CcdA [Aurantimonas
manganoxydans SI85-9A1]
Length = 246
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 110/214 (51%), Gaps = 18/214 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRA----------QIIGDSIAFSLGLATTLA 176
AG ++ LSPC L ++P L Y+ + + RA ++I S+ F LG +T
Sbjct: 13 AGALSFLSPCVLPLVPPYLCYMAGVSADELRAGRQMETTSYGRLIATSVTFVLGFSTVFI 72
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
+LG GAS G+ Q L + A IVMGLN L + L F + + R +A + P
Sbjct: 73 MLGAGASTIGQLLRQNLDWLGMVAGVAIIVMGLNFLGVFRLS----FLSREARISAPDKP 128
Query: 237 SSV-QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPLLLA 294
SV AYL GL FA +PC PVL +LG +A +K + G L+L Y+ G P +LA
Sbjct: 129 RSVLGAYLMGLAFAFGWTPCIGPVLGAILG-LAGAKSTVGEGALMLGFYSAGLGIPFILA 187
Query: 295 ASFAGA-LQSLLSFRKFSSWINPMSGALLLGGGL 327
A+F+GA + + FR + + G LL+ GL
Sbjct: 188 AAFSGAFFRWMHGFRAHLATVEKAMGGLLVVTGL 221
>gi|433775133|ref|YP_007305600.1| cytochrome c biogenesis protein [Mesorhizobium australicum WSM2073]
gi|433667148|gb|AGB46224.1| cytochrome c biogenesis protein [Mesorhizobium australicum WSM2073]
Length = 248
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 103/216 (47%), Gaps = 16/216 (7%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYI------------GAFGSGKSRAQIIGDSIAFSLGLAT 173
GAG ++ LSPC L ++P L Y+ GA +R ++ SIAF LG +T
Sbjct: 12 GAGAISFLSPCVLPLVPPYLCYMAGVSVDDFRGNAGATAREGARGALLYSSIAFVLGFST 71
Query: 174 TLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAA 233
LG GAS G+ L + A L I+MGLN L I+ + L S F + A
Sbjct: 72 VFVALGAGASTIGRLLRVWQEPLAMGAGVLIILMGLNFLGILRIPLLSREARFQSQGKPA 131
Query: 234 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
S+V AY+ GL FA +PC PVL +L + G LL +Y+ G P L+
Sbjct: 132 ---SAVAAYVMGLAFAFGWTPCIGPVLGPILTLAGGRETVGEGALLLAAYSLGLGIPFLI 188
Query: 294 AASFAGALQSLL-SFRKFSSWINPMSGALLLGGGLY 328
AA F+GA L FR + GALL+ G++
Sbjct: 189 AALFSGAFMRFLGKFRVHLGRVEKAIGALLVVAGVF 224
>gi|298528087|ref|ZP_07015491.1| cytochrome c biogenesis protein transmembrane region
[Desulfonatronospira thiodismutans ASO3-1]
gi|298511739|gb|EFI35641.1| cytochrome c biogenesis protein transmembrane region
[Desulfonatronospira thiodismutans ASO3-1]
Length = 448
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 118/222 (53%), Gaps = 10/222 (4%)
Query: 111 GQLSALS-FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSL 169
G L L+ F +LA +F GL +L+PC ++P+T+ + G G +I + + L
Sbjct: 45 GTLEGLALFGTLAAVFAGGLALNLTPCVYPLIPITVSFFGGMGGQGRGRLLIHGGL-YIL 103
Query: 170 GLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVM---GLNLLEIIELQLPSFFDNF 226
GLATT ++LGV A+ G G + PL +G+A+V+ L++ EL+LP+ +
Sbjct: 104 GLATTNSILGVAAALTGGLIGGLLQN-PLVLAGIALVLLIFALSMFGFWELRLPASLN-- 160
Query: 227 DPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTG 286
+AA+ +F + GLT + A+PC P + LL +VAT PL+G + + + G
Sbjct: 161 --QAASRSFGGYFGSLFMGLTIGVVAAPCIGPFVLGLLAWVATMGSPLLGFAVFFTLSLG 218
Query: 287 YVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLY 328
PL A F+G LQSL ++ W+ + G +L+G +Y
Sbjct: 219 LGVPLFFLAVFSGKLQSLPRSGEWMIWVRKLLGWILVGMAVY 260
>gi|406924354|gb|EKD61171.1| hypothetical protein ACD_54C00365G0002 [uncultured bacterium]
Length = 245
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 16/213 (7%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ----------IIGDSIAFSLGLATTLA 176
AGL++ LSPC L ++P L Y+ + RA+ ++ ++AF+LG+ T
Sbjct: 12 AGLLSFLSPCILPMVPFYLCYMAGLSMQELRAKEGIAPGAQRRLVVQAVAFALGVTTIFV 71
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
LLG+GA+ G+ + Q L A + IV GL+ L + + F + R + P
Sbjct: 72 LLGLGATALGRVFLQWKETLSWVAGAVLIVFGLHFLGVFRIA----FLYREARIETQSKP 127
Query: 237 SS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
++ + AY+ GL F +PC P LA +L + D GGTLLL Y P ++AA
Sbjct: 128 TTLIGAYVMGLAFGFGWTPCVGPALAAILMVASGMGDMWRGGTLLLVYGLAMTLPFVVAA 187
Query: 296 SFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
FAG S ++ R ++ G +L+ GL
Sbjct: 188 LFAGPFLSWVARHRSLLGYVEKAMGVMLIVFGL 220
>gi|282896754|ref|ZP_06304761.1| Cytochrome c biogenesis protein, transmembrane region protein
[Raphidiopsis brookii D9]
gi|281198360|gb|EFA73249.1| Cytochrome c biogenesis protein, transmembrane region protein
[Raphidiopsis brookii D9]
Length = 287
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 119/231 (51%), Gaps = 24/231 (10%)
Query: 112 QLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGL 171
Q +A F L + F GL+ S+SPC L++LP+ L YIG KSR + F LG
Sbjct: 70 QNTANPFVLLPLAFIGGLLASISPCILALLPVNLSYIGTLKI-KSRWDAFSQAGLFVLGT 128
Query: 172 ATTLALLGVGASFAG------KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDN 225
T L+L G+ +SFAG + Y I GL +A VMGL L+ +I++ LP D
Sbjct: 129 VTILSLFGLVSSFAGMVIIEYRGYINIVVGLIMA------VMGLWLIGVIKIYLPQI-DL 181
Query: 226 FDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTT 285
P P SV GLTFAL +SPC++PVL +L A + ++G ++SY
Sbjct: 182 KLPNTG----PYSV-----GLTFALVSSPCASPVLFAVLAAAAATGSQVLGTLTMVSYAL 232
Query: 286 GYVAPLLLAASFAGALQSLLSFRKFSSWINPM-SGALLLGGGLYTFLDRLF 335
GY A + LA+ F G ++ S + S I + S AL+L G Y + L+
Sbjct: 233 GYTALIFLASLFTGLVKQSRSLLQHSETIIQVGSVALMLTGIYYLYTGTLW 283
>gi|42524631|ref|NP_970011.1| thiol:disulfide interchange protein [Bdellovibrio bacteriovorus
HD100]
gi|39576841|emb|CAE78070.1| thiol:disulfide interchange protein [Bdellovibrio bacteriovorus
HD100]
Length = 653
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 109/221 (49%), Gaps = 11/221 (4%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGV 180
L +F AG+ TS +PC ++P+TL +G + ++R Q S + LG+ATT +LLG+
Sbjct: 248 LIFVFFAGIFTSFTPCIFPMIPITLAVLGNHSNERTRLQNFFTSCIYVLGIATTYSLLGL 307
Query: 181 GASFAGKAYG-QIGTGLPL-AASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSS 238
A+ +G +G +G L + + M L++ + +LQ+P+F N R
Sbjct: 308 AAASSGGLFGASLGNPYVLTVVCAIFLAMALSMYGLYDLQVPAFLRNKLGRGTKKQ--GV 365
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFA 298
+ YL GL + ASPC PVL +L YVA++++ ++G L Y G ++ F
Sbjct: 366 IGVYLTGLFAGIVASPCVGPVLVAILTYVASTQNKMMGFLYLFVYALGLGLIFIVLGLFN 425
Query: 299 GALQSLLSFRKFSSWINPMS---GALLLGGGLYTFLDRLFP 336
SL + W+N G L+L Y +L+ L P
Sbjct: 426 QLANSL---PRSGPWMNAFKFILGTLML-SAFYYYLELLLP 462
>gi|255262108|ref|ZP_05341450.1| C-type cytochrome biogenesis protein [Thalassiobium sp. R2A62]
gi|255104443|gb|EET47117.1| C-type cytochrome biogenesis protein [Thalassiobium sp. R2A62]
Length = 250
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 105/205 (51%), Gaps = 12/205 (5%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGK------SRAQIIGDSIAFSLGLATTLALLGV 180
AGL++ LSPC L ++P L Y+G +R + + + F LGL+T LG+
Sbjct: 21 AGLLSFLSPCVLPIVPPYLAYMGGVSVSDMSEARGARRKALVSACFFVLGLSTVFLFLGL 80
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP-SSV 239
S AG+A+ Q + A G+ ++ GL+ + +I + F + R A + S+
Sbjct: 81 AFSAAGRAFLQYQDWFIMIAGGIIVIFGLHFIGLIRIP----FLLREARVDAGDKGGSAF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
AY+ GL FA +PC P+L +LG A+ D + G TLL +Y G P LL A+F
Sbjct: 137 GAYVLGLAFAFGWTPCLGPILGAILGMAASEGDVVRGTTLLGAYAIGLGIPFLLVAAFFP 196
Query: 300 ALQSLLSFRKFS-SWINPMSGALLL 323
L L+ + K + I +SGALL+
Sbjct: 197 RLTRLMGWMKRNMGAIEKVSGALLI 221
>gi|333910571|ref|YP_004484304.1| cytochrome c biogenesis protein transmembrane region [Methanotorris
igneus Kol 5]
gi|333751160|gb|AEF96239.1| cytochrome c biogenesis protein transmembrane region [Methanotorris
igneus Kol 5]
Length = 218
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 112/221 (50%), Gaps = 12/221 (5%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
L +IF AGL T+L PC +++LP++L Y FG S+ + S+ F LGL+ +LLG
Sbjct: 2 DLLLIFFAGLFTALGPCVITILPISLAY--TFGVSNSKKEGFIVSLFFVLGLSLIFSLLG 59
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPS----FFDNFDPRAAAANF 235
V ++ G + L A LAI G + L +L + + F ++ +A F
Sbjct: 60 VISAVFGSTFDL--YKLKFIAGILAIAFGFSTLFNYKLSILTDSLNKFRSYLNKAKNKKF 117
Query: 236 PSS----VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
S + A+L G + + A+ C+ PVL T+L Y AT D L G L Y+ G+ P+
Sbjct: 118 QFSSLKYLNAFLFGFFYGVTANTCADPVLITILSYTATKSDILFGFIALFIYSIGFGIPI 177
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLD 332
++ ++ +S+++ IN +SG +L+ G+Y +
Sbjct: 178 IILSTLGAEGKSIINKITKPRVINIISGVILIVLGIYVIFN 218
>gi|320352689|ref|YP_004194028.1| Protein-disulfide reductase [Desulfobulbus propionicus DSM 2032]
gi|320121191|gb|ADW16737.1| Protein-disulfide reductase [Desulfobulbus propionicus DSM 2032]
Length = 232
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 18/204 (8%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
SL + F G++ SL+PC ++P+T G IG G SR + S+ + G+A T A LG
Sbjct: 19 SLIIAFAGGVLASLTPCVYPMIPITAGVIGHANIGGSRWRGFVLSLIYVTGMALTYAALG 78
Query: 180 VGASFAGKAYGQIGTGLP---LAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
V A+ G+ +G I + P L + ++ L +L+++ QLP+F R
Sbjct: 79 VFAAATGRFFGAINSS-PWTFLLVGNIILLFALGMLDVV--QLPTFAGRMASRRLGMT-- 133
Query: 237 SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
++AG++ AL A PC+TPVL TLL Y AT++ + GG LL ++ G A LL +
Sbjct: 134 ---GIFVAGISSALVAGPCTTPVLGTLLAYTATTRSLVAGGLLLFVFSLGMGALLLGVGT 190
Query: 297 FAGALQS-------LLSFRKFSSW 313
F+ L S ++ +K W
Sbjct: 191 FSSFLASIPRSGSWMVKIKKIMGW 214
>gi|407961075|dbj|BAM54315.1| hypothetical protein BEST7613_5384 [Synechocystis sp. PCC 6803]
Length = 247
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 105/209 (50%), Gaps = 12/209 (5%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGV 180
L + F GL+ S SPC L++LP+ L YIG SR Q +G + F LG L+L G+
Sbjct: 41 LPLAFLGGLLASFSPCILALLPVNLSYIGTL-QVTSRRQALGKASLFVLGTVIVLSLFGL 99
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
++FA + +A + +VMGL+ ++ L LP N P A P V
Sbjct: 100 VSAFATAVIVDFKGYVHVAIGTIILVMGLSFAGLVHLPLPKTQINL-PVAG----PLGV- 153
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGA 300
G+TFAL +SPC++PVL +L +T+ + ++ Y GY A + A+ F G
Sbjct: 154 ----GMTFALVSSPCASPVLFAVLAAASTTGSQSLSVMAMVFYALGYTAVIFFASLFTGL 209
Query: 301 LQSLLSFRKFSSWINPM-SGALLLGGGLY 328
++ K S W+ + SG L+L GG Y
Sbjct: 210 IKQSRVLLKNSHWVTGLGSGLLMLAGGYY 238
>gi|16331537|ref|NP_442265.1| hypothetical protein sll0686 [Synechocystis sp. PCC 6803]
gi|383323279|ref|YP_005384133.1| hypothetical protein SYNGTI_2371 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383326448|ref|YP_005387302.1| hypothetical protein SYNPCCP_2370 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383492332|ref|YP_005410009.1| hypothetical protein SYNPCCN_2370 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384437600|ref|YP_005652325.1| hypothetical protein SYNGTS_2372 [Synechocystis sp. PCC 6803]
gi|451815689|ref|YP_007452141.1| hypothetical protein MYO_123960 [Synechocystis sp. PCC 6803]
gi|1001191|dbj|BAA10335.1| sll0686 [Synechocystis sp. PCC 6803]
gi|339274633|dbj|BAK51120.1| hypothetical protein SYNGTS_2372 [Synechocystis sp. PCC 6803]
gi|359272599|dbj|BAL30118.1| hypothetical protein SYNGTI_2371 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275769|dbj|BAL33287.1| hypothetical protein SYNPCCN_2370 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278939|dbj|BAL36456.1| hypothetical protein SYNPCCP_2370 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|451781658|gb|AGF52627.1| hypothetical protein MYO_123960 [Synechocystis sp. PCC 6803]
Length = 275
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 105/209 (50%), Gaps = 12/209 (5%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGV 180
L + F GL+ S SPC L++LP+ L YIG SR Q +G + F LG L+L G+
Sbjct: 69 LPLAFLGGLLASFSPCILALLPVNLSYIGTL-QVTSRRQALGKASLFVLGTVIVLSLFGL 127
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
++FA + +A + +VMGL+ ++ L LP N P A P V
Sbjct: 128 VSAFATAVIVDFKGYVHVAIGTIILVMGLSFAGLVHLPLPKTQINL-PVAG----PLGV- 181
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGA 300
G+TFAL +SPC++PVL +L +T+ + ++ Y GY A + A+ F G
Sbjct: 182 ----GMTFALVSSPCASPVLFAVLAAASTTGSQSLSVMAMVFYALGYTAVIFFASLFTGL 237
Query: 301 LQSLLSFRKFSSWINPM-SGALLLGGGLY 328
++ K S W+ + SG L+L GG Y
Sbjct: 238 IKQSRVLLKNSHWVTGLGSGLLMLAGGYY 266
>gi|310659101|ref|YP_003936822.1| Membrane protein [[Clostridium] sticklandii]
gi|308825879|emb|CBH21917.1| Membrane protein [[Clostridium] sticklandii]
Length = 232
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 117/237 (49%), Gaps = 23/237 (9%)
Query: 107 EAVLGQLSALS----FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIG 162
+ VL SA + ++ + F AG++++ SPC L+ +PL +GY+G R + +
Sbjct: 2 DVVLQMFSAFMLEHIYMAVPIAFLAGVISAFSPCVLTTIPLVIGYMGN-SKISDRKKGLL 60
Query: 163 DSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSF 222
S+ F+LGL+ T LG ++ G + G + L + + I LN+L II
Sbjct: 61 YSLIFTLGLSITFIALGFLTAYVGMIFSGYGKVIYLVLAFIMIGSSLNILGII------- 113
Query: 223 FDNFDPRAAAANFPSS------VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIG 276
NF + A + + + GL AASPC+TPVLA +L +VA+ +P++G
Sbjct: 114 --NFKKQENACSIEEKPVRKGLIGIFTLGLFGGFAASPCATPVLAAILSFVASRGNPVLG 171
Query: 277 GTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGAL---LLGGGLYTF 330
+L++Y+ G ++LA L SL++ K+ N + L +L GLY F
Sbjct: 172 VFMLMAYSIGNSILVILAGVSVSTLNSLVTQPKYIKLANNLKNILAVFILFAGLYVF 228
>gi|71907898|ref|YP_285485.1| cytochrome c biogenesis protein, transmembrane region
[Dechloromonas aromatica RCB]
gi|71847519|gb|AAZ47015.1| Cytochrome c biogenesis protein, transmembrane region
[Dechloromonas aromatica RCB]
Length = 234
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 107/208 (51%), Gaps = 12/208 (5%)
Query: 128 GLVTSLSPCTLSVLPLTLGYIGAFG----SGKSRAQIIGDSIAFSLGLATTLALLGVGAS 183
GL T+L+PC L + P LGY+G G +G +I + AF G+AT ++GV +
Sbjct: 27 GLATALNPCCLPMYPAALGYLGQTGLHPEAGAKSGRI---AFAFIAGMATATTVMGVATA 83
Query: 184 FAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN--FPSSVQA 241
G +GQ+ L L + L VMGL+LL +I L P+ + + R + P A
Sbjct: 84 SFGWVFGQLPVPLRLFLAVLPFVMGLDLLGVIRLH-PALYVPWLSRTSPLKQFVPRMGHA 142
Query: 242 YLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGAL 301
++ G F LA +PC+TP+L +L +A S P G L+ Y G PLL A A +
Sbjct: 143 FVVGFLFTLAIAPCATPILIGILSAIAMSGSPRYGAALMFLYGLGAGLPLLAVARGAHLM 202
Query: 302 -QSLLSFRKFSSWINPMSGALLLGGGLY 328
Q L+S R + +N + G +L+ GL+
Sbjct: 203 GQRLISSRARRA-VNAILGGMLVVLGLF 229
>gi|422873329|ref|ZP_16919814.1| cytochrome c-type biogenesis protein [Clostridium perfringens F262]
gi|380305714|gb|EIA17991.1| cytochrome c-type biogenesis protein [Clostridium perfringens F262]
Length = 403
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 20/217 (9%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ------IIGDSIAFSLGLATTLA 176
++F G+++ SPC L +LP+ L + R +I +++ F+LG++TT
Sbjct: 8 IVFIEGILSIFSPCILPILPIYLSILSNSSVEDIRDSNFKSGVLIRNTLFFTLGISTTFF 67
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIV-MGLNLLEIIELQLPSFFDNFDPRAAAANF 235
+LG S A ++ + + G+ I+ MGL L +I L + + R NF
Sbjct: 68 ILGSSIS-ALSSFFNTNKNIIMILGGVIILFMGLFYLGVINLNILN-------REKRLNF 119
Query: 236 P----SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
S V A++ G TF+ +PC P+LA++L ++SK+ L+ L+L YT G++ P
Sbjct: 120 KYKNMSPVSAFVLGFTFSFGWTPCIGPILASVLVMASSSKNLLMSNLLILVYTIGFILPF 179
Query: 292 LLAASFAGAL-QSLLSFRKFSSWINPMSGALLLGGGL 327
++A+ F G L + +K I +SG ++ GL
Sbjct: 180 IIASLFYGKLFKKFDGIKKHMDLIKKISGIFIIMAGL 216
>gi|418937305|ref|ZP_13490956.1| cytochrome c biogenesis protein transmembrane region [Rhizobium sp.
PDO1-076]
gi|375055964|gb|EHS52173.1| cytochrome c biogenesis protein transmembrane region [Rhizobium sp.
PDO1-076]
Length = 248
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGY-----IGAFGSGK------SRAQIIGDSIAFSLGLATTL 175
AG ++ LSPC L ++P L Y + F +G+ +R + S+ F+LG AT
Sbjct: 14 AGALSFLSPCVLPLVPPYLCYMAGISVDQFRAGEETQNAAARRTVFLTSLVFTLGFATVF 73
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LG GAS G Q L + IVMGLN L + L F + + R A
Sbjct: 74 VALGAGASTIGGLLRQHLDLLAKIGGAIIIVMGLNFLGVFRLG----FLSSEMRFAGGGK 129
Query: 236 PSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPLLL 293
P+++ AY+ GL FA +PC PVL +LG VA SK + G LLL+ Y+ G P +
Sbjct: 130 PATLSGAYVMGLAFAFGWTPCIGPVLGAILG-VAASKQTVGDGALLLAIYSLGLAVPFWI 188
Query: 294 AASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
AA F+GA L+ FR + + G LL+ GL
Sbjct: 189 AAGFSGAFMRFLARFRHHLGLVEKIMGGLLVATGL 223
>gi|18309723|ref|NP_561657.1| cytochrome C-type biogenesis protein [Clostridium perfringens str.
13]
gi|18144401|dbj|BAB80447.1| probable cytochrome C-type biogenesis protein [Clostridium
perfringens str. 13]
Length = 403
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 111/220 (50%), Gaps = 20/220 (9%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ------IIGDSIAFSLGLAT 173
+L ++F G+++ SPC L +LP+ L + R +I +++ F+LG++T
Sbjct: 5 NLFIVFIEGILSIFSPCILPILPIYLSMLSNSSVEDIRDSNFKSGVLIRNTLFFTLGIST 64
Query: 174 TLALLGVGASFAGKAYGQIGTGLPLAASGLAIV-MGLNLLEIIELQLPSFFDNFDPRAAA 232
T +LG S A ++ + + G+ I+ MGL L +I L + + R
Sbjct: 65 TFFILGSSIS-ALSSFFNTNKNIIMILGGVIILFMGLFYLGLINLNILN-------REKR 116
Query: 233 ANFP----SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYV 288
NF S V A++ G TF+ +PC P+LA++L ++SK+ L+ L+L YT G++
Sbjct: 117 LNFKYKNMSPVSAFVLGFTFSFGWTPCIGPILASVLVMASSSKNLLMSNLLILVYTIGFI 176
Query: 289 APLLLAASFAGAL-QSLLSFRKFSSWINPMSGALLLGGGL 327
P ++A+ F G L + +K I +SG ++ GL
Sbjct: 177 LPFIIASLFYGKLFKKFDGIKKHMDLIKKISGIFIIIAGL 216
>gi|422345183|ref|ZP_16426097.1| hypothetical protein HMPREF9476_00170 [Clostridium perfringens
WAL-14572]
gi|373227908|gb|EHP50218.1| hypothetical protein HMPREF9476_00170 [Clostridium perfringens
WAL-14572]
Length = 403
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 20/217 (9%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ------IIGDSIAFSLGLATTLA 176
++F G+++ SPC L +LP+ L + R +I +++ F+LG++TT
Sbjct: 8 IVFIEGILSIFSPCILPILPIYLSMLSNSSVEDIRDSNFKSGVLIRNTLFFTLGISTTFF 67
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIV-MGLNLLEIIELQLPSFFDNFDPRAAAANF 235
+LG S A ++ + + G+ I+ MGL L +I L + + R NF
Sbjct: 68 ILGSSIS-ALSSFFNTNKNIIMILGGVIILFMGLFYLGVINLNILN-------REKRLNF 119
Query: 236 P----SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
S V A++ G TF+ +PC P+LA++L ++SK+ L+ L+L YT G++ P
Sbjct: 120 KYKNMSPVSAFVLGFTFSFGWTPCIGPILASVLVMASSSKNLLMSNLLILVYTIGFILPF 179
Query: 292 LLAASFAGAL-QSLLSFRKFSSWINPMSGALLLGGGL 327
++A+ F G L + +K I +SG ++ GL
Sbjct: 180 IIASLFYGKLFKKFDGIKKHMDLIKKISGIFIIIAGL 216
>gi|406897533|gb|EKD41468.1| hypothetical protein ACD_73C00712G0001 [uncultured bacterium]
Length = 230
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 116/214 (54%), Gaps = 11/214 (5%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIG-AFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L +++ +G+ TSL+PC ++P+ +GY+G GS K R + +A GL+ + L
Sbjct: 14 TLFLVYLSGVATSLTPCVYPLIPVVVGYLGNQSGSNKHRFFVCLSYVA---GLSLIYSAL 70
Query: 179 GVGASFAGKAYGQIGTG--LPLAASGLAIVMGLNLLEIIELQLPSFF-DNFDPRAAAANF 235
GV A F G +G++ T L LA ++G +++ E+ LP F DP A+
Sbjct: 71 GVVAVFTGSVFGEMTTSSWLYLAFGFFMALLGGTMMDFYEIPLPRFLAPKADPSGASHK- 129
Query: 236 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
S ++++ G T L ASPC+ PVLA LL Y+A+ K G ++L ++ G + LLLA
Sbjct: 130 -SLFKSFMVGATSGLVASPCTAPVLAGLLLYIASQKQYGRGAFMMLIFSLG-LNTLLLAI 187
Query: 296 SF-AGALQSLLSFRKFSSWINPMSGALLLGGGLY 328
F AG L+++ + + + G +L+G G Y
Sbjct: 188 GFSAGILRNIPRSGMWMIRVKKIMGLILIGTGFY 221
>gi|110802194|ref|YP_699793.1| membrane protein [Clostridium perfringens SM101]
gi|110682695|gb|ABG86065.1| membrane protein [Clostridium perfringens SM101]
Length = 230
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 112/217 (51%), Gaps = 10/217 (4%)
Query: 119 TSLAVI--FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLA 176
T LA+I F AG+V S SPCTLS +PL +GY+ K + S+ FS+GL T
Sbjct: 15 TFLAIILSFFAGVVASFSPCTLSSIPLLIGYVQG-SEIKDNKKAFKYSLIFSIGLGITFT 73
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
++G+ + GKA+ G + + + I GL +L++I L F D D
Sbjct: 74 VIGLLTALIGKAFLGAGKFWYIILAFIMIGSGLQVLDVINL----FGDKKDACKITKRRE 129
Query: 237 SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
+ + G+ + ASPC+TP++A ++ ++A S + +IG +LL Y+ G+ ++LA +
Sbjct: 130 GILDVFFLGILSGILASPCATPIMAAIIVFIAASGNLVIGMIMLLMYSLGHSVLIILAGT 189
Query: 297 FAGALQSLL---SFRKFSSWINPMSGALLLGGGLYTF 330
G ++ + +K + + G +++ GLY F
Sbjct: 190 SFGLVEKIAYSEKGKKTGRVLKNILGTIIILVGLYLF 226
>gi|316934480|ref|YP_004109462.1| cytochrome c biogenesis transmembrane protein [Rhodopseudomonas
palustris DX-1]
gi|315602194|gb|ADU44729.1| cytochrome c biogenesis protein transmembrane region
[Rhodopseudomonas palustris DX-1]
Length = 247
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 106/217 (48%), Gaps = 16/217 (7%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAF--------GSGKSRA---QIIGDSIAFSLGLAT 173
FGAG+++ LSPC L ++P L Y+ G SRA +++ S+AF LG +T
Sbjct: 11 FGAGVLSFLSPCVLPLVPPYLCYLAGVSLDQLARGGDQPSRAIDGRVVAASLAFVLGFST 70
Query: 174 TLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAA 233
LG AS GKA L + A + IV+GL+ L + + L F +
Sbjct: 71 VFVALGASASAIGKAVTDHFDTLGIVAGAIIIVLGLHFLGVFRIGLLYREARFHNVSRGV 130
Query: 234 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
F V AY+ GL FA +PC PVLAT+L G LL +Y+ G P LL
Sbjct: 131 GF---VGAYVVGLAFAFGWTPCVGPVLATILLVAGVEGSAAHGAVLLGAYSLGIGLPFLL 187
Query: 294 AASFAGALQSLLSFRK--FSSWINPMSGALLLGGGLY 328
A+ F+GA L++ + ++ M GAL+L G L+
Sbjct: 188 ASLFSGAFIRLMARLRTQMATVEKVMGGALVLTGVLF 224
>gi|56695892|ref|YP_166243.1| sulfur oxidation V protein [Ruegeria pomeroyi DSS-3]
gi|56677629|gb|AAV94295.1| sulfur oxidation V protein [Ruegeria pomeroyi DSS-3]
Length = 245
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 106/210 (50%), Gaps = 18/210 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAF------GSGK----SRAQIIGDSIAFSLGLATTLA 176
AGL++ +PC L ++P L Y+G G G+ ++ ++I S+AF+ G+ +
Sbjct: 12 AGLLSFFTPCVLPMVPFYLSYMGGLSMAELRGDGRIAPGAQRRLIVSSVAFAAGVTSVFM 71
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
+LG+GA+ G+ +G L AA+ + +V GL+ L +I + L D + P
Sbjct: 72 MLGMGATALGRLFGTYLDTLSWAAAAILVVFGLHFLGVIRVPLLYREARMD-----STMP 126
Query: 237 SS--VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
+S + AYL GL F +PC P LA +L + + GG LLL Y G AP ++A
Sbjct: 127 ASTLLGAYLMGLAFGFGWTPCVGPALAAILMIASGMGEIWRGGLLLLVYGIGMTAPFVVA 186
Query: 295 ASFAGA-LQSLLSFRKFSSWINPMSGALLL 323
A FA L + R +W+ GA+L+
Sbjct: 187 AFFARPFLGWVQRHRAAFAWVEKGMGAMLI 216
>gi|262196458|ref|YP_003267667.1| protein-disulfide reductase [Haliangium ochraceum DSM 14365]
gi|262079805|gb|ACY15774.1| Protein-disulfide reductase [Haliangium ochraceum DSM 14365]
Length = 611
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 19/220 (8%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGAS 183
+FGAG +TSL+PC ++P+ +G GA +R + + A+ LG+ A+LG+ +
Sbjct: 43 VFGAGFLTSLTPCVYPMIPIVVGVFGARDEDVTRQKAFALASAYVLGMGAMYAVLGIVFA 102
Query: 184 FAGKAYGQIGTG----LPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
GK +G I + P+ A L + + ++ EL LP+ + R +
Sbjct: 103 LIGKQFGSILSDPKVVFPIVA--LYLALAASMFGAFELNLPA---SLQARLSRVGGRGYG 157
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
A+ GL L A+PC+ P+L +LGYVAT++D + G +LL +Y G L A+F
Sbjct: 158 GAFGMGLVGGLTAAPCTGPILVGILGYVATTRDVVAGASLLFTYAIGMGVLFWLLAAFT- 216
Query: 300 ALQSLLSFRKFSSWINPMS---GALLLGGGLYTFLDRLFP 336
+S K W+ + G LL ++ FL +FP
Sbjct: 217 -----VSLPKSGRWMESVKSFGGIALLAVSIF-FLRPIFP 250
>gi|168204553|ref|ZP_02630558.1| putative cytochrome C-type biogenesis protein [Clostridium
perfringens E str. JGS1987]
gi|170663744|gb|EDT16427.1| putative cytochrome C-type biogenesis protein [Clostridium
perfringens E str. JGS1987]
Length = 403
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 20/217 (9%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ------IIGDSIAFSLGLATTLA 176
++F G+++ SPC L +LP+ L + R +I +++ F+LG++TT
Sbjct: 8 IVFIEGILSIFSPCILPILPIYLSMLSNSSVEDIRDSNFKSGVLIRNTLFFTLGISTTFF 67
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIV-MGLNLLEIIELQLPSFFDNFDPRAAAANF 235
+LG S A ++ + + G+ I+ MGL L +I L + + R NF
Sbjct: 68 ILGSSIS-ALSSFFNTNKNIIMILGGVIILFMGLFYLGLINLNILN-------REKRLNF 119
Query: 236 P----SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
S V A++ G TF+ +PC P+LA++L ++SK+ L+ L+L YT G++ P
Sbjct: 120 KYKNMSPVSAFVLGFTFSFGWTPCIGPILASVLVMASSSKNLLMSNLLILVYTIGFILPF 179
Query: 292 LLAASFAGAL-QSLLSFRKFSSWINPMSGALLLGGGL 327
++A+ F G L + +K I +SG ++ GL
Sbjct: 180 IIASLFYGKLFKKFDGIKKHMDLIKKISGIFIIIAGL 216
>gi|427729057|ref|YP_007075294.1| cytochrome c biogenesis protein [Nostoc sp. PCC 7524]
gi|427364976|gb|AFY47697.1| cytochrome c biogenesis protein [Nostoc sp. PCC 7524]
Length = 283
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 111/217 (51%), Gaps = 24/217 (11%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGV 180
L + F G++ S+SPC L++LP+ L YIG KSR + F LG T L+L G+
Sbjct: 75 LPLAFIGGVLASVSPCILALLPVNLSYIGTLKI-KSRWDAFSKAGLFVLGAVTILSLFGL 133
Query: 181 GASFAG------KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
+SFAG + Y I GL + +VMGL L+ +++L LP N P+A
Sbjct: 134 VSSFAGAVMVDYRGYINIVVGL------IMVVMGLWLMGVVKLPLPQMNVNV-PQAGP-- 184
Query: 235 FPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
Y GLTFAL +SPC++PVL +L A + ++G ++SY GY + + LA
Sbjct: 185 -------YGVGLTFALVSSPCASPVLFAVLAAAAATGSQVLGTLTMVSYALGYTSLIFLA 237
Query: 295 ASFAG-ALQSLLSFRKFSSWINPMSGALLLGGGLYTF 330
+ F G A QS + I S AL+L G Y F
Sbjct: 238 SLFTGLAKQSNKLLKHSEGIIRFGSVALILTGAYYLF 274
>gi|397690967|ref|YP_006528221.1| thioredoxin [Melioribacter roseus P3M]
gi|395812459|gb|AFN75208.1| thioredoxin [Melioribacter roseus P3M]
Length = 583
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 112/219 (51%), Gaps = 10/219 (4%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS-RAQIIGDSIAFSLGLATTLALLGVGA 182
+F GL +L+PC ++P+T+GY G G++ R ++G + LG+A T +++GV
Sbjct: 204 VFLGGLALNLTPCVYPLIPITVGYFGGQSEGRTGRLFLLGS--LYVLGMALTYSVIGVIT 261
Query: 183 SFAGKAYGQI--GTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
+ +G +G + T + + + L +V+ L+ + E +LP D++ +A A
Sbjct: 262 ALSGAVFGSLLQNTIVIVGIAVLFVVLSLSQFGVYEFKLP---DSWVMKAGGAK-SGYFG 317
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGA 300
A+ GLT + A+PC P + L+ YVA DP+ G L G P L A F+G
Sbjct: 318 AFFMGLTMGIVAAPCIGPFVLGLVTYVAAKGDPVYGFWLFFVMALGLGLPYLFLALFSGK 377
Query: 301 LQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFPTTM 339
++SL + + + G LLLG +Y F+ LFP +
Sbjct: 378 IKSLPRAGDWMEGVKHVFGFLLLGMAVY-FVAPLFPKEI 415
>gi|417091928|ref|ZP_11956662.1| putative cytochrome C biogenesis protein [Streptococcus suis R61]
gi|353532497|gb|EHC02166.1| putative cytochrome C biogenesis protein [Streptococcus suis R61]
Length = 231
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 103/196 (52%), Gaps = 11/196 (5%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS-RAQIIGDSIAFSLGLATTLA 176
FT L +F GL++ LSPC L +LP+ +G + GK +++ ++++F +G+A T
Sbjct: 6 FTVLT-LFAEGLLSFLSPCVLPILPIYVGLLAGGAEGKEGEKKVLVNTLSFVVGIALTFF 64
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
LLG +S + Q + SGL IV+ + +L++ +P F +
Sbjct: 65 LLGFASSLLSRVL-QANAQVLQIISGLLIVL-MGILQLGWFNIPVLEREFSAKNKVYQAG 122
Query: 237 SSVQ---AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
V A+L G TF+ + +PC P+LA++ Y A+S+ + G LLL Y G++ P +L
Sbjct: 123 KQVTPFLAFLMGFTFSFSWTPCIGPILASVFIY-ASSQQGWLSGILLLVYCLGFILPFIL 181
Query: 294 AASFAGALQSLLSFRK 309
A F+ Q +L+F K
Sbjct: 182 VAFFS---QKMLAFFK 194
>gi|428311697|ref|YP_007122674.1| cytochrome c biogenesis protein [Microcoleus sp. PCC 7113]
gi|428253309|gb|AFZ19268.1| cytochrome c biogenesis protein [Microcoleus sp. PCC 7113]
Length = 288
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 114/242 (47%), Gaps = 12/242 (4%)
Query: 88 GSLGDMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGY 147
G+L + + G + + Q + L++ F GL+ S+SPC L +LP+ L Y
Sbjct: 42 GALSEAIDNLAFGLGDRYQQWFDKQSTNNPLVLLSLSFAGGLIASISPCILCLLPVNLSY 101
Query: 148 IGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVM 207
IG SR + + +F LG+ T L+L G+ +S AG + + + IVM
Sbjct: 102 IGT-REITSRWDALIKAGSFVLGVVTMLSLFGLFSSLAGAVLIHFRGYVQVVVGAVIIVM 160
Query: 208 GLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYV 267
GL LL I+ L LP NF A + GLTFAL +SPC++PV+ +L
Sbjct: 161 GLMLLGIVHLPLPQ--TNFKLPIAGP--------FGVGLTFALVSSPCTSPVMFAVLAAA 210
Query: 268 ATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPM-SGALLLGGG 326
A + + ++SY+ GY A + A+ F G ++ S I S AL+L GG
Sbjct: 211 AATGSQIQSVLSMVSYSLGYTAIIFFASLFTGLVKRTRFLLNHSQGIVRFGSVALILIGG 270
Query: 327 LY 328
Y
Sbjct: 271 YY 272
>gi|17229695|ref|NP_486243.1| hypothetical protein alr2203 [Nostoc sp. PCC 7120]
gi|17131294|dbj|BAB73902.1| alr2203 [Nostoc sp. PCC 7120]
Length = 283
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 110/217 (50%), Gaps = 24/217 (11%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGV 180
L + F GL+ S+SPC L++LP+ L YIG KSR + F LG T L+L G+
Sbjct: 75 LPLAFVGGLLASVSPCILALLPVNLSYIGTLKI-KSRWDAFSKAGLFVLGAVTILSLFGL 133
Query: 181 GASFAG------KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
+SFAG + Y I GL +A VMGL L+ ++++ LP N P+A
Sbjct: 134 VSSFAGAVMVEYRGYINIVVGLIMA------VMGLWLMGVVKIPLPQMNVNL-PQAGP-- 184
Query: 235 FPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
Y GLTFAL +SPC++PVL +L A + ++G ++SY GY + LA
Sbjct: 185 -------YGVGLTFALVSSPCASPVLFAVLAAAAATGSQVLGTLTMVSYALGYTLLIFLA 237
Query: 295 ASFAG-ALQSLLSFRKFSSWINPMSGALLLGGGLYTF 330
+ F G A QS + I S AL+L G Y F
Sbjct: 238 SLFTGMAKQSNKLLKHSEGIIRFGSVALILTGAYYLF 274
>gi|114706581|ref|ZP_01439482.1| Cytochrome c biogenesis protein, transmembrane region [Fulvimarina
pelagi HTCC2506]
gi|114537973|gb|EAU41096.1| Cytochrome c biogenesis protein, transmembrane region [Fulvimarina
pelagi HTCC2506]
Length = 244
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 101/215 (46%), Gaps = 14/215 (6%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ---------IIGDSIAFSLGLATTL 175
F AGL++ +SPC L ++P L Y+ + R Q I+ S AF +G T
Sbjct: 10 FFAGLLSFVSPCVLPLVPPYLAYLAGISFDQVREQGADPAVARRIVLSSFAFVVGFTTVF 69
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LG AS G+A + L + A L IVMGL+ L + L L F+ A A
Sbjct: 70 IALGATASVIGQAIAEWFDTLSVLAGILIIVMGLHFLGVFRLSLLYREARFNIGAKPAG- 128
Query: 236 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
+ AY+ GL FA +PC PVLA +L + + + G LL +Y+ G P +LAA
Sbjct: 129 --PLGAYIMGLAFAFGWTPCVGPVLAAILFIAGSQETAMRGAGLLATYSLGIGIPFMLAA 186
Query: 296 SFAGALQSLLS-FRKFSSWINP-MSGALLLGGGLY 328
FA S FR + + M GAL+ G L+
Sbjct: 187 VFATRFLDWASRFRNHMATVEKVMGGALVFTGALF 221
>gi|282901355|ref|ZP_06309280.1| Cytochrome c biogenesis protein, transmembrane region protein
[Cylindrospermopsis raciborskii CS-505]
gi|281193634|gb|EFA68606.1| Cytochrome c biogenesis protein, transmembrane region protein
[Cylindrospermopsis raciborskii CS-505]
Length = 296
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 116/226 (51%), Gaps = 24/226 (10%)
Query: 112 QLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGL 171
Q +A F L + F GL+ S+SPC L++LP+ L YIG KSR + F LG
Sbjct: 79 QNTANPFVLLPLAFIGGLLASISPCILALLPVNLSYIGTLKI-KSRWDAFSQAGLFVLGT 137
Query: 172 ATTLALLGVGASFAG------KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDN 225
T L+L G+ +SFAG + Y I GL +A VMGL L+ +I++ LP D
Sbjct: 138 VTILSLFGLVSSFAGMVIIEYRGYINIIVGLIMA------VMGLWLIGVIKIYLPQI-DL 190
Query: 226 FDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTT 285
P P SV GLTFAL +SPC++PVL +L A + ++G ++SY
Sbjct: 191 KLPNTG----PYSV-----GLTFALVSSPCASPVLFAVLAAAAATGSQVLGTLTMVSYAL 241
Query: 286 GYVAPLLLAASFAGALQSLLSFRKFSSWINPM-SGALLLGGGLYTF 330
GY + LA+ F G ++ + + S I + S AL+L G Y +
Sbjct: 242 GYTILIFLASLFTGLVKQSRNLLQHSETIIQLGSVALMLTGIYYLY 287
>gi|313885771|ref|ZP_07819518.1| cytochrome C biogenesis protein transmembrane region [Eremococcus
coleocola ACS-139-V-Col8]
gi|312618998|gb|EFR30440.1| cytochrome C biogenesis protein transmembrane region [Eremococcus
coleocola ACS-139-V-Col8]
Length = 238
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 27/233 (11%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIG----------DSIAFSLGLAT 173
+F AG ++ +PCT +LP+ +G + +G+ IG ++AF LGL+T
Sbjct: 11 VFIAGFLSFFAPCTFPLLPVYIGLLTD-KAGEYNKMTIGRLEINKGAIIKTMAFVLGLST 69
Query: 174 TLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAA 233
+ +LG GA GK I L + A L ++G++ +++I+ + + F+
Sbjct: 70 SFVILGFGAGIIGKLL--INRWLLMIAGFLVFLLGIHQMDLIQFEK---INQFNGIQVNH 124
Query: 234 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
N P ++ AYL G++F+L +PC P+LA +L A+S G L+L Y+ G + P L+
Sbjct: 125 NKPKALGAYLMGVSFSLGWTPCVGPILAAVLITSASSGQQFYGAFLMLVYSIGLMIPFLI 184
Query: 294 AA--------SFAGALQSLLSFRKFSSWINPMSGALLLGG---GLYTFLDRLF 335
A F + L++ ++ ++ + G +L+ L F + LF
Sbjct: 185 MAIASSALMNHFEQVKKHLVTIKRIGGFLVALMGIVLMSNQLPNLTAFFNNLF 237
>gi|114767009|ref|ZP_01445917.1| sulfur oxidation V protein [Pelagibaca bermudensis HTCC2601]
gi|114540793|gb|EAU43857.1| sulfur oxidation V protein [Roseovarius sp. HTCC2601]
Length = 245
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 97/188 (51%), Gaps = 23/188 (12%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDS--------------IAFSLGLA 172
AGL++ +PC L ++P L Y+ +G S A++ DS + F+ G+
Sbjct: 12 AGLLSFFTPCILPMVPFYLCYM----AGISMAELRDDSGIEAGAQRRLVLSAVVFAAGVT 67
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
T LLG+GA+ G+A+ L AA+ + +V GL+ L +I + L + + R +
Sbjct: 68 TIFVLLGMGATAVGQAFADWKQPLSYAAAAVLLVFGLHFLGVIRVPL----LHREARMES 123
Query: 233 ANFPSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
P+SV AY+ GL F +PC P LA++L + D + GG LLL Y G AP
Sbjct: 124 KAEPTSVLGAYVMGLAFGFGWTPCVGPALASILMIASGMGDIVRGGLLLLVYGIGMTAPF 183
Query: 292 LLAASFAG 299
++AA F+G
Sbjct: 184 VIAALFSG 191
>gi|90417859|ref|ZP_01225771.1| cytochrome c-type biogenesis protein, transmembrane region, DsbD
family [Aurantimonas manganoxydans SI85-9A1]
gi|90337531|gb|EAS51182.1| cytochrome c-type biogenesis protein, transmembrane region, DsbD
family [Aurantimonas manganoxydans SI85-9A1]
Length = 244
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 109/219 (49%), Gaps = 24/219 (10%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIG--AFGSGKSRA-------QIIGDSIAFSLGLATTLAL 177
AGL++ +SPC L ++P L Y+ +F + R QI+ S+AF G T
Sbjct: 12 AGLLSFVSPCVLPIVPPYLAYLAGLSFDQVRERGTEPAVARQIMLASLAFVAGFTTVFVA 71
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
LG AS G+ Q L + A + I+MGL+ L + L L + R A P+
Sbjct: 72 LGATASLVGQVIAQWFDVLSVVAGIIIIIMGLHFLGVFRLSL----LYREARVNVAQKPA 127
Query: 238 S-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKD-PLIGGTLLLSYTTGYVAPLLLAA 295
+ AY+ GL FA +PC PVLA +L +VA S+D L G LL +Y+ G P LLAA
Sbjct: 128 GPLGAYVIGLAFAFGWTPCVGPVLAAIL-FVAGSQDTALRGAGLLATYSIGIGVPFLLAA 186
Query: 296 SFAGALQSLLSF-----RKFSSWINPMSGALLLGGGLYT 329
+FA L+F R ++ M GAL++ G L+
Sbjct: 187 AFA---TRFLAFAARIRRHMATVEKIMGGALVVTGILFV 222
>gi|169344431|ref|ZP_02865400.1| putative cytochrome C-type biogenesis protein [Clostridium
perfringens C str. JGS1495]
gi|169297351|gb|EDS79460.1| putative cytochrome C-type biogenesis protein [Clostridium
perfringens C str. JGS1495]
Length = 403
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 20/217 (9%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ------IIGDSIAFSLGLATTLA 176
++F G+++ SPC L +LP+ L + R +I +++ F+LG++TT
Sbjct: 8 IVFIEGILSIFSPCILPILPIYLSMLSNSSVEDIRDSNFKSGVLIRNTLFFTLGISTTFF 67
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIV-MGLNLLEIIELQLPSFFDNFDPRAAAANF 235
+LG S A ++ + + G+ I+ MGL L +I L + R NF
Sbjct: 68 ILGSSIS-ALSSFFNTNKNIIMILGGVIILFMGLFYLGVINLNTLN-------REKRLNF 119
Query: 236 P----SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
S V A++ G TF+ +PC P+LA++L ++SK+ L+ L+L YT G++ P
Sbjct: 120 KYKNMSPVSAFVLGFTFSFGWTPCIGPILASVLVMASSSKNLLMSNLLILVYTIGFILPF 179
Query: 292 LLAASFAGAL-QSLLSFRKFSSWINPMSGALLLGGGL 327
++A+ F G L + +K I +SG ++ GL
Sbjct: 180 IIASLFYGKLFKKFDGIKKHMDLIKKISGIFIIIAGL 216
>gi|110799581|ref|YP_695190.1| cytochrome C-type biogenesis protein [Clostridium perfringens ATCC
13124]
gi|110674228|gb|ABG83215.1| putative cytochrome C-type biogenesis protein [Clostridium
perfringens ATCC 13124]
Length = 403
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 109/217 (50%), Gaps = 20/217 (9%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ------IIGDSIAFSLGLATTLA 176
++F G+++ SPC L +LP+ L + R +I +++ F+LG++TT
Sbjct: 8 IVFIEGILSIFSPCILPILPIYLSMLSNSSVEDIRDSNFKSGVLIRNTLFFTLGISTTFF 67
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIV-MGLNLLEIIELQLPSFFDNFDPRAAAANF 235
+LG S A ++ + + G+ I+ MGL L +I L + + R NF
Sbjct: 68 ILGSSIS-ALSSFFNTNKNIIMILGGVIILFMGLFYLGVINLNILN-------REKRLNF 119
Query: 236 P----SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
S + A++ G TF+ +PC P+LA++L ++SK+ L+ L+L YT G++ P
Sbjct: 120 KYKNMSPLSAFVLGFTFSFGWTPCIGPILASVLVMASSSKNLLMSNLLILVYTIGFILPF 179
Query: 292 LLAASFAGAL-QSLLSFRKFSSWINPMSGALLLGGGL 327
++A+ F G L + +K I +SG ++ GL
Sbjct: 180 IIASLFYGKLFKKFDGIKKHMDLIKKISGIFIIIAGL 216
>gi|407973217|ref|ZP_11154129.1| cytochrome c-type biogenesis protein CcdA [Nitratireductor indicus
C115]
gi|407431058|gb|EKF43730.1| cytochrome c-type biogenesis protein CcdA [Nitratireductor indicus
C115]
Length = 253
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 110/218 (50%), Gaps = 25/218 (11%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIG---------------AFGS--GKSRAQIIGDSIAFS 168
GAG ++ LSPC L ++P L Y+ A G+ G++R + S AF
Sbjct: 12 GAGALSFLSPCVLPLVPPYLCYMAGVSVEEFQGEKEDGKAHGAAPGRTRLALFSASFAFV 71
Query: 169 LGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
LG T LLG GAS G L +AA + I+MGLN L + L++P F +
Sbjct: 72 LGFTTVFVLLGAGASTIGGLLRAWQQELAIAAGIVIILMGLNFLGV--LRIPFLFR--EA 127
Query: 229 RAAAANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTG 286
R A P++ + AY+ GL FA +PC PVL +L +A +D + G LLL+ Y+ G
Sbjct: 128 RFQAGGKPATKLGAYIMGLAFAFGWTPCIGPVLGPIL-TLAGGRDTVGEGALLLAVYSLG 186
Query: 287 YVAPLLLAASFAGALQSLLS-FRKFSSWINPMSGALLL 323
P L+AA F+GA L+ FR + + GALL+
Sbjct: 187 LGIPFLIAALFSGAFMRFLARFRMHLGRVEKVMGALLV 224
>gi|260431359|ref|ZP_05785330.1| cytochrome c biogenesis protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415187|gb|EEX08446.1| cytochrome c biogenesis protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 265
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYI----------GAFGSGKSRAQIIGDSIAFSLGLATTLA 176
AGL++ LSPC L ++P L Y+ GA S R + + + F+LG+ T
Sbjct: 31 AGLLSFLSPCILPIVPFYLSYLAGAGMNQIAAGAEVSNAVRVRAVLAATCFALGVITVFV 90
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
LG A+ G + L A+ + I MGL+ L +I++ + + F A +
Sbjct: 91 GLGATATVFGSLVREYFDILRWVAAAIIIAMGLHFLGVIKIGI--LYRQFRADAGDTSNV 148
Query: 237 SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
S + AY+ GL FA +PC PVLA +L A + G LLL+Y G P ++AA
Sbjct: 149 SLIGAYVIGLAFAFGWTPCVGPVLAAILFTAAGQETANQGAALLLAYGAGMTLPFIVAAM 208
Query: 297 FAGALQSLLS-FRKFSSWINPMSGALLL 323
F G + ++ FRK I + G +L+
Sbjct: 209 FIGPFMAWMARFRKHLWLIEKLMGLMLV 236
>gi|410656803|ref|YP_006909174.1| putative cytochrome c biogenesis protein [Dehalobacter sp. DCA]
gi|410659845|ref|YP_006912216.1| putative c-type cytochrome biogenesis protein [Dehalobacter sp. CF]
gi|409019158|gb|AFV01189.1| putative cytochrome c biogenesis protein [Dehalobacter sp. DCA]
gi|409022201|gb|AFV04231.1| putative c-type cytochrome biogenesis protein [Dehalobacter sp. CF]
Length = 230
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 99/187 (52%), Gaps = 13/187 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAG 186
AG++TS++PC L+ +PL +GY+G G+ + + S+AF+LG+A T LG AS G
Sbjct: 27 AGVLTSITPCALTSVPLVIGYVGGTGNNDPK-KAFRLSLAFALGMAVTFTTLGTAASLLG 85
Query: 187 KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRA---AAANFPSSVQAYL 243
K IGT P L ++M L L+ E+ NF P + + A++
Sbjct: 86 K---LIGTSSPWWYIALGVLMVLMALQTWEVY------NFIPSTFLTSKTTKKGYIGAFV 136
Query: 244 AGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQS 303
G+ + +SPC+TPVL LLG VA S + G LLL Y+ G+ +L A + G ++
Sbjct: 137 TGILGGVFSSPCATPVLVVLLGIVARSGNVAWGVLLLLLYSVGHSVLVLAAGTSVGLVKK 196
Query: 304 LLSFRKF 310
+ S ++
Sbjct: 197 VTSSGRY 203
>gi|182624128|ref|ZP_02951915.1| putative cytochrome C-type biogenesis protein [Clostridium
perfringens D str. JGS1721]
gi|177910744|gb|EDT73104.1| putative cytochrome C-type biogenesis protein [Clostridium
perfringens D str. JGS1721]
Length = 403
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 109/217 (50%), Gaps = 20/217 (9%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ------IIGDSIAFSLGLATTLA 176
++F G+++ SPC L +LP+ L + R +I +++ F+LG++TT
Sbjct: 8 IVFIEGILSIFSPCILPILPIYLSMLSNSSVEDIRDSNFKSGVLIRNTLFFTLGISTTFF 67
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIV-MGLNLLEIIELQLPSFFDNFDPRAAAANF 235
+LG S A ++ + + G+ I+ MGL L +I L + + R NF
Sbjct: 68 ILGSSIS-ALSSFFNTNKNIIMILGGVIILFMGLFYLGVINLNILN-------REKRLNF 119
Query: 236 P----SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
S V A++ G TF+ +PC P+LA++L ++SK+ L+ L+L YT G++ P
Sbjct: 120 KYKNMSPVSAFVLGFTFSFGWTPCIGPILASVLVMASSSKNLLMSNLLILVYTIGFILPF 179
Query: 292 LLAASFAGAL-QSLLSFRKFSSWINPMSGALLLGGGL 327
++A+ F G L + + + I +SG ++ GL
Sbjct: 180 IIASLFYGKLFKKIDGIKTHMDLIKKISGIFIIIAGL 216
>gi|110802776|ref|YP_698047.1| cytochrome C biogenesis protein [Clostridium perfringens SM101]
gi|110683277|gb|ABG86647.1| putative cytochrome C-type biogenesis protein [Clostridium
perfringens SM101]
Length = 403
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 20/217 (9%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ------IIGDSIAFSLGLATTLA 176
++F G+++ SPC L +LP+ L + R +I +++ F+LG++TT
Sbjct: 8 IVFIEGILSIFSPCILPILPIYLSMLSNSSVEDIRDSNFKSGVLIRNTLFFTLGISTTFF 67
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIV-MGLNLLEIIELQLPSFFDNFDPRAAAANF 235
+LG S A ++ + + G+ I+ MGL L +I L + + R NF
Sbjct: 68 ILGSSIS-ALSSFFNTNKNIIMILGGVIILFMGLFYLGVINLNILN-------REKRLNF 119
Query: 236 P----SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
S V A++ G TF+ +PC P+LA++L ++SK+ L+ L+L YT G++ P
Sbjct: 120 KYKNMSPVSAFVLGFTFSFGWTPCIGPILASVLVMASSSKNLLMSNLLILVYTIGFILPF 179
Query: 292 LLAASFAGAL-QSLLSFRKFSSWINPMSGALLLGGGL 327
++A+ F L + +K I +SG ++ GL
Sbjct: 180 IIASLFYSKLFKKFDGIKKHMDLIKKISGIFIIIAGL 216
>gi|168217403|ref|ZP_02643028.1| putative cytochrome C-type biogenesis protein [Clostridium
perfringens NCTC 8239]
gi|182380548|gb|EDT78027.1| putative cytochrome C-type biogenesis protein [Clostridium
perfringens NCTC 8239]
Length = 403
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 109/217 (50%), Gaps = 20/217 (9%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ------IIGDSIAFSLGLATTLA 176
++F G+++ SPC L +LP+ L + R +I +++ F+LG++TT
Sbjct: 8 IVFIEGILSIFSPCILPILPIYLSMLSNSSVEDIRDSNFKSGVLIRNTLFFTLGISTTFF 67
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIV-MGLNLLEIIELQLPSFFDNFDPRAAAANF 235
+LG S A ++ + + G+ I+ MGL L +I L + + R NF
Sbjct: 68 ILGSSIS-ALSSFFNTNKNIIMILGGVIILFMGLFYLGVINLNILN-------REKRLNF 119
Query: 236 P----SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
S + A++ G TF+ +PC P+LA++L ++SK+ L+ L+L YT G++ P
Sbjct: 120 KYKNMSPLSAFVLGFTFSFGWTPCIGPILASVLVMASSSKNLLMSNLLILVYTIGFILPF 179
Query: 292 LLAASFAGAL-QSLLSFRKFSSWINPMSGALLLGGGL 327
++A+ F G L + +K I +SG ++ GL
Sbjct: 180 IIASLFYGKLFKKFDGIKKHMDLIKKVSGIFIVIAGL 216
>gi|425436244|ref|ZP_18816682.1| Similar to tr|Q8YUX8|Q8YUX8 [Microcystis aeruginosa PCC 9432]
gi|389679090|emb|CCH92105.1| Similar to tr|Q8YUX8|Q8YUX8 [Microcystis aeruginosa PCC 9432]
Length = 283
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 110/215 (51%), Gaps = 24/215 (11%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGV 180
L + F G++ S+SPC L++LP+ L YIG +SR + F LG T L+L G+
Sbjct: 75 LPLAFLGGVIASISPCILALLPVNLSYIGTLKI-ESRWDAFSKAGLFVLGAVTILSLFGL 133
Query: 181 GASFAG------KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
+SFAG + Y I GL +A VMGL LL +I+L LP N P+A
Sbjct: 134 VSSFAGTVMVEYRGYINIVVGLIMA------VMGLWLLGVIKLPLPQMNLNL-PQAGP-- 184
Query: 235 FPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
Y GLTFAL +SPC++PVL +L A + ++G ++SY GY + LA
Sbjct: 185 -------YGVGLTFALVSSPCASPVLFAVLAAAAATGSQVLGTLTMVSYALGYTILIFLA 237
Query: 295 ASFAG-ALQSLLSFRKFSSWINPMSGALLLGGGLY 328
+ F G A QS + + I S AL++ G Y
Sbjct: 238 SLFTGLAKQSRNLLQHSETIIRLGSVALMVTGAYY 272
>gi|440752312|ref|ZP_20931515.1| cytochrome C biogenesis transmembrane region family protein
[Microcystis aeruginosa TAIHU98]
gi|440176805|gb|ELP56078.1| cytochrome C biogenesis transmembrane region family protein
[Microcystis aeruginosa TAIHU98]
Length = 283
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 110/215 (51%), Gaps = 24/215 (11%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGV 180
L + F G++ S+SPC L++LP+ L YIG +SR + F LG T L+L G+
Sbjct: 75 LPLAFLGGVIASISPCILALLPVNLSYIGTLKI-ESRWDAFSKAGLFVLGAVTILSLFGL 133
Query: 181 GASFAG------KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
+SFAG + Y I GL +A VMGL LL +I+L LP N P+A
Sbjct: 134 VSSFAGTVMVEYRGYINIVVGLIMA------VMGLWLLGVIKLPLPQMNLNL-PQAGP-- 184
Query: 235 FPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
Y GLTFAL +SPC++PVL +L A + ++G ++SY GY + LA
Sbjct: 185 -------YGVGLTFALVSSPCASPVLFAVLAAAAATGSQVLGTLTMVSYALGYTILIFLA 237
Query: 295 ASFAG-ALQSLLSFRKFSSWINPMSGALLLGGGLY 328
+ F G A QS + + I S AL++ G Y
Sbjct: 238 SLFTGLAKQSRNLLQHSETIIRLGSVALMVTGAYY 272
>gi|227822000|ref|YP_002825971.1| cytochrome c-type biogenesis protein [Sinorhizobium fredii NGR234]
gi|227341000|gb|ACP25218.1| putative cytochrome c-type biogenesis protein [Sinorhizobium fredii
NGR234]
Length = 248
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 111/215 (51%), Gaps = 19/215 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIG-----------AFGSGKSRAQIIGDSIAFSLGLATTL 175
AG ++ LSPC L ++P L Y+ A +G +R ++ ++ F+LG AT
Sbjct: 14 AGALSFLSPCVLPLVPPYLCYMAGVSVDQFRSGDAAAAGSTRRAVLPAALLFTLGFATVF 73
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LG GAS G Q L + IVMGL+ L + + L + + R
Sbjct: 74 VALGAGASSIGLLLRQYIDLLSRIGGIIIIVMGLHFLGVFRIGLLAR----EARFHGGGK 129
Query: 236 PSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPLLL 293
P+++ AY+ GL FA +PC PVL T+LG VA +++ + G +LL+ Y+ G P +
Sbjct: 130 PATLSGAYIMGLAFAFGWTPCIGPVLGTILG-VAAARETVSDGAMLLAIYSLGLAVPFWI 188
Query: 294 AASFAGA-LQSLLSFRKFSSWINPMSGALLLGGGL 327
AA F+GA ++ L+ FR+ + + GALL+ GL
Sbjct: 189 AAGFSGAFMRFLMRFRRHLGLVEKLMGALLVLAGL 223
>gi|225872850|ref|YP_002754307.1| cytochrome c biogenesis protein [Acidobacterium capsulatum ATCC
51196]
gi|225794140|gb|ACO34230.1| cytochrome c biogenesis protein [Acidobacterium capsulatum ATCC
51196]
Length = 230
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 17/213 (7%)
Query: 112 QLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYI--------GAFGSGKSRAQI-IG 162
LS S ++ V G + SL PC L + P G G A+ +
Sbjct: 8 DLSGSSVLAIPVALVGGAIASLCPCCLPLYPAAAATCSSARESDCGCCGPQMPIAKRGLA 67
Query: 163 DSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSF 222
+S+AF+LG+A +ALLG+ A+ G+ G L + + ++MG+++L + L LP+F
Sbjct: 68 NSVAFALGMAVAMALLGIVAALVGR-IATAGDWLRYVVAVIPLLMGMHILGWLRLPLPAF 126
Query: 223 FDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS 282
+ F + A+ G +L +PC TP+LA +L Y A + L G LL +
Sbjct: 127 SIK------ESRF-QATGAFGIGFLLSLVIAPCGTPILAAVLSYAAIKGNTLYGALLLFA 179
Query: 283 YTTGYVAPLLLAASFAGALQSLLSFRKFSSWIN 315
Y G PLL+AAS +G + L R + W++
Sbjct: 180 YGVGAGIPLLIAASASGRIAGWLDLRGYRKWVD 212
>gi|392411600|ref|YP_006448207.1| thiol:disulfide interchange protein [Desulfomonile tiedjei DSM
6799]
gi|390624736|gb|AFM25943.1| thiol:disulfide interchange protein [Desulfomonile tiedjei DSM
6799]
Length = 488
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 110/224 (49%), Gaps = 10/224 (4%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
+L +F G+ +L+PC ++P+T+ + G + + R ++ + + +GL+ T +LLG
Sbjct: 97 ALLAVFVGGMALNLTPCVYPLIPVTIAFFGG-RTEQGRGKLAIHAALYIIGLSITNSLLG 155
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVM---GLNLLEIIELQLPSFFDNFDPRAAAANFP 236
V A+ G G P S +A+++ +L + E QLP N ++ A F
Sbjct: 156 VIAALTGNILGSALQN-PFVLSAVAVILLAFAASLFGLWEFQLPERLRNSASKSYAGYFG 214
Query: 237 SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
S + GLT + A+PC P + LL +VA P +G + + G PL + A
Sbjct: 215 S----FFMGLTLGVVAAPCLGPFVVGLLTWVAAMGSPWMGFLVFFVLSLGLGVPLFVLAM 270
Query: 297 FAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFPTTMA 340
F+GAL+ L + W+ + G +L+ +Y F+ LFP +A
Sbjct: 271 FSGALEKLPGSGAWMLWVRKLMGWVLIAMAVY-FVRPLFPEWIA 313
>gi|168209884|ref|ZP_02635509.1| putative cytochrome C-type biogenesis protein [Clostridium
perfringens B str. ATCC 3626]
gi|170711936|gb|EDT24118.1| putative cytochrome C-type biogenesis protein [Clostridium
perfringens B str. ATCC 3626]
Length = 403
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 20/217 (9%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ------IIGDSIAFSLGLATTLA 176
++F G+++ SPC L +LP+ L + R +I +++ F+LG++TT
Sbjct: 8 IVFIEGILSIFSPCILPILPIYLSMLSNSSVEDIRDSNFKSGVLIRNTLFFTLGISTTFF 67
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIV-MGLNLLEIIELQLPSFFDNFDPRAAAANF 235
+LG S A ++ + + G+ I+ MGL L +I L + R NF
Sbjct: 68 ILGSSIS-ALSSFFNTNKNIIMILGGVIILFMGLFYLGVINLNTLN-------REKRLNF 119
Query: 236 P----SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
S + A++ G TF+ +PC P+LA++L ++SK+ L+ L+L YT G++ P
Sbjct: 120 KYKNMSPLSAFVLGFTFSFGWTPCIGPILASVLVMASSSKNLLMSNLLILVYTIGFILPF 179
Query: 292 LLAASFAGAL-QSLLSFRKFSSWINPMSGALLLGGGL 327
++A+ F G L + +K I +SG ++ GL
Sbjct: 180 IIASLFYGKLFKKFDGIKKHMDLIKKISGIFIIIAGL 216
>gi|163746722|ref|ZP_02154079.1| sulfur oxidation V protein [Oceanibulbus indolifex HEL-45]
gi|161379836|gb|EDQ04248.1| sulfur oxidation V protein [Oceanibulbus indolifex HEL-45]
Length = 245
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 95/184 (51%), Gaps = 17/184 (9%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYI-----------GAFGSGKSRAQIIGDSIAFSLGLATTL 175
AGL++ +PC L ++P L Y+ GA G R +++ S+ F+LG++T
Sbjct: 12 AGLLSFFTPCILPMVPFYLSYMAGLSVTELRGDGAIAPGAQR-RLVLSSVLFALGVSTIF 70
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LLG+GA+ G+ + Q L A+ + +V GL+ L +I ++P + + R
Sbjct: 71 VLLGMGATALGQVFTQYLEPLSWVAAAILLVFGLHFLGVI--KVPLLYR--EARLEGGGK 126
Query: 236 PSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
P+S+ AY+ GL F +PC P LA +L + D GG LL +Y G AP ++A
Sbjct: 127 PTSIWGAYVMGLAFGFGWTPCVGPALAAILMIASGMGDITRGGLLLFAYGAGMTAPFVVA 186
Query: 295 ASFA 298
A FA
Sbjct: 187 ALFA 190
>gi|386811213|ref|ZP_10098439.1| thiol:disulfide interchange protein [planctomycete KSU-1]
gi|386405937|dbj|GAB61320.1| thiol:disulfide interchange protein [planctomycete KSU-1]
Length = 610
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 112/218 (51%), Gaps = 10/218 (4%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKSRAQIIGDSIAFSLGLA 172
F SL +IF AG+ S +PC ++P+T+ IG SG+ + + S+ + LG+A
Sbjct: 195 FVSLILIFLAGIGLSFTPCVYPMIPITVAIIGGQAAADQASGRRPLKALLLSLIYVLGIA 254
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAI--VMGLNLLEIIELQLPSFFDNFDPRA 230
A LGV A+ G +G + +A+ + L++ + L++PSF + R
Sbjct: 255 VVYASLGVAAASTGALFGTALQSPWIIGFVVAVFVALALSMFGLYTLRVPSFISD---RL 311
Query: 231 AAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAP 290
V ++ GL + ASPC PVLA+LL Y+A++ + +G +L + G P
Sbjct: 312 GTKTGKGFVGVFIMGLISGIVASPCIGPVLASLLVYIASTGNKFLGFWMLFIFAWGLGVP 371
Query: 291 LLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLY 328
L++ +F+GA+++L ++ + + G LLLG LY
Sbjct: 372 LIVLGTFSGAIKTLPKSGEWMVTVERIFGLLLLGVALY 409
>gi|416399379|ref|ZP_11686960.1| hypothetical protein CWATWH0003_3738 [Crocosphaera watsonii WH
0003]
gi|357262405|gb|EHJ11538.1| hypothetical protein CWATWH0003_3738 [Crocosphaera watsonii WH
0003]
Length = 282
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 108/217 (49%), Gaps = 24/217 (11%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGV 180
L + F GL+ S+SPC L++LP+ L YIG KSR + F LG T L+L G+
Sbjct: 75 LPLAFIGGLLASISPCILALLPVNLSYIGTLNI-KSRWDAFSKAGLFVLGAVTILSLFGL 133
Query: 181 GASFAG------KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
+SFAG + Y I GL +A VMGL L+ ++++ LP N A
Sbjct: 134 VSSFAGLVMVEYRGYINIVVGLIMA------VMGLWLIGVVKIPLPQM--NVSLPVAGP- 184
Query: 235 FPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
Y GLTFAL +SPC++PVL +L A S ++G ++SY GY + LA
Sbjct: 185 -------YGVGLTFALVSSPCASPVLFAVLAAAAASGSQILGTLTMVSYALGYTMLIFLA 237
Query: 295 ASFAG-ALQSLLSFRKFSSWINPMSGALLLGGGLYTF 330
+ F G A QS + I S AL++ G Y F
Sbjct: 238 SLFTGLAKQSKKLLSHSETIIRTGSVALIMTGAYYLF 274
>gi|422302535|ref|ZP_16389897.1| Similar to tr|Q8YUX8|Q8YUX8 [Microcystis aeruginosa PCC 9806]
gi|389788268|emb|CCI16245.1| Similar to tr|Q8YUX8|Q8YUX8 [Microcystis aeruginosa PCC 9806]
Length = 283
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 107/214 (50%), Gaps = 23/214 (10%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGV 180
L + F G++ S+SPC L++LP+ L YIG +SR + F LG T L+L G+
Sbjct: 75 LPLAFLGGVIASISPCILALLPVNLSYIGTLKI-ESRWDAFSKAGLFVLGAVTILSLFGL 133
Query: 181 GASFAG------KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
+SFAG + Y I GL +A VMGL LL +I+L LP N P+A
Sbjct: 134 VSSFAGTVMVEYRGYINIVVGLIMA------VMGLWLLGVIKLPLPQMNLNL-PQAGP-- 184
Query: 235 FPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
Y GLTFAL +SPC++PVL +L A + ++G ++SY GY + LA
Sbjct: 185 -------YGVGLTFALVSSPCASPVLFAVLAAAAATGSQVLGTLTMVSYALGYTILIFLA 237
Query: 295 ASFAGALQSLLSFRKFSSWINPMSGALLLGGGLY 328
+ F G + + + S I + L+ G Y
Sbjct: 238 SLFTGLAKQSRNLLQHSETIIRLGSVALMATGAY 271
>gi|378825931|ref|YP_005188663.1| putative cytochrome c-type biogenesis protein [Sinorhizobium fredii
HH103]
gi|365178983|emb|CCE95838.1| putative cytochrome c-type biogenesis protein [Sinorhizobium fredii
HH103]
Length = 248
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 111/215 (51%), Gaps = 19/215 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIG-----------AFGSGKSRAQIIGDSIAFSLGLATTL 175
AG ++ LSPC L ++P L Y+ A +G +R ++ ++ F+LG AT
Sbjct: 14 AGALSFLSPCVLPLVPPYLCYMAGVSVDQFRSGDAAAAGSTRRAVLPAALLFTLGFATVF 73
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LG GAS G Q L + IVMGL+ L + + L + + R
Sbjct: 74 VALGAGASSIGLLLRQYIDLLSRIGGIIIIVMGLHFLGVFRIGLLAR----EARFHGGGK 129
Query: 236 PSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPLLL 293
P+++ AY+ GL FA +PC PVL T+LG VA +++ + G +LL+ Y+ G P +
Sbjct: 130 PATLSGAYIMGLAFAFGWTPCIGPVLGTILG-VAAARETVGDGAMLLAIYSLGLAVPFWI 188
Query: 294 AASFAGA-LQSLLSFRKFSSWINPMSGALLLGGGL 327
AA F+GA ++ L+ FR+ + + GALL+ GL
Sbjct: 189 AAGFSGAFMRFLMRFRRHLGLVEKLMGALLVLAGL 223
>gi|443648215|ref|ZP_21129917.1| cytochrome C biogenesis transmembrane region family protein
[Microcystis aeruginosa DIANCHI905]
gi|159029107|emb|CAO90096.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443335262|gb|ELS49738.1| cytochrome C biogenesis transmembrane region family protein
[Microcystis aeruginosa DIANCHI905]
Length = 283
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 107/214 (50%), Gaps = 23/214 (10%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGV 180
L + F G++ S+SPC L++LP+ L YIG +SR + F LG T L+L G+
Sbjct: 75 LPLAFLGGVIASISPCILALLPVNLSYIGTLKI-ESRWDAFSKAGLFVLGAVTILSLFGL 133
Query: 181 GASFAG------KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
+SFAG + Y I GL +A VMGL LL +I+L LP N P+A
Sbjct: 134 VSSFAGAVMVEYRGYINIVVGLIMA------VMGLWLLGVIKLPLPQMNLNL-PQAGP-- 184
Query: 235 FPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
Y GLTFAL +SPC++PVL +L A + ++G ++SY GY + LA
Sbjct: 185 -------YGVGLTFALVSSPCASPVLFAVLAAAAATGSQVLGTLTMVSYALGYTILIFLA 237
Query: 295 ASFAGALQSLLSFRKFSSWINPMSGALLLGGGLY 328
+ F G + + + S I + L+ G Y
Sbjct: 238 SLFTGLAKQSRNLLQHSETIIRLGSVALMATGAY 271
>gi|158321737|ref|YP_001514244.1| cytochrome c biogenesis protein transmembrane region [Alkaliphilus
oremlandii OhILAs]
gi|158141936|gb|ABW20248.1| cytochrome c biogenesis protein transmembrane region [Alkaliphilus
oremlandii OhILAs]
Length = 231
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 8/221 (3%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGS----GKSRAQIIGDSIAFSLGLATT 174
SL++ FGAG ++ SPC L ++P+ + YI +S+ ++ F LG
Sbjct: 6 VSLSIAFGAGFLSFFSPCILPLVPVYIMYITGISVEEEINQSKLLAFKRTMGFVLGFTII 65
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
++G A F GK + + + L ++ G N++ I+ L + N
Sbjct: 66 FMIMGTSAGFLGKIFIRNREIFSKISGILIMIFGFNMMGILNLNILKLEKRLKAPKKMTN 125
Query: 235 FPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
+ SS+ L G+ FA +PC PVLA++L Y +S G LLL Y+ G P +L
Sbjct: 126 WFSSI---LMGMAFAAGWTPCFGPVLASILVYAGSSATVSKGVYLLLIYSIGMAIPFILT 182
Query: 295 ASFAGALQSLLSF-RKFSSWINPMSGALLLGGGLYTFLDRL 334
+ F + +F +I +SG +++ G+ F +++
Sbjct: 183 SLFINTFNRFIQKAERFIPYIPKISGFIMIVFGVLVFFNKI 223
>gi|325293182|ref|YP_004279046.1| cytochrome c-type biogenesis protein [Agrobacterium sp. H13-3]
gi|418408442|ref|ZP_12981758.1| cytochrome c-type biogenesis protein [Agrobacterium tumefaciens 5A]
gi|325061035|gb|ADY64726.1| cytochrome c-type biogenesis protein [Agrobacterium sp. H13-3]
gi|358005356|gb|EHJ97682.1| cytochrome c-type biogenesis protein [Agrobacterium tumefaciens 5A]
Length = 253
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 108/215 (50%), Gaps = 19/215 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ-----------IIGDSIAFSLGLATTL 175
AG ++ LSPC L ++P L Y+ + R + ++ + F+LG AT
Sbjct: 19 AGALSFLSPCVLPLVPPYLCYMAGVSVEQFRTENTAPRPEIRRAVLFSAFFFTLGFATVF 78
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LG GAS G Q L + I+MGLN L + + L S + R A
Sbjct: 79 VALGAGASTIGTLLRQNLDILAKIGGFIIILMGLNFLGVFRIGLFSR----EARFQGAGK 134
Query: 236 PSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPLLL 293
P+++ AY+ GL FA +PC PVL +LG VA S+D + G +LL+ Y+ G P +
Sbjct: 135 PATLSGAYVMGLAFAFGWTPCIGPVLGAILG-VAASRDTVGDGAMLLAVYSLGLAVPFWI 193
Query: 294 AASFAGA-LQSLLSFRKFSSWINPMSGALLLGGGL 327
AA+F+G+ ++ L+ FR+ + + G LL+ GL
Sbjct: 194 AAAFSGSFMRFLVRFRRHLGLVEKLMGVLLVLTGL 228
>gi|385810080|ref|YP_005846476.1| thiol:disulfide interchange protein [Ignavibacterium album JCM
16511]
gi|383802128|gb|AFH49208.1| Thiol:disulfide interchange protein [Ignavibacterium album JCM
16511]
Length = 590
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 110/223 (49%), Gaps = 10/223 (4%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGK-SRAQIIGDSIAFSLGLATTLALLG 179
L +F GL +L+PC ++P+T+GY G G SR ++G + F LG+A T +++G
Sbjct: 209 LLFVFIGGLALNLTPCVYPLIPITIGYFGGQSEGSTSRLTLMG--VLFMLGMAVTYSIVG 266
Query: 180 VGASFAGKAYGQI--GTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
V S G +G + + + + + +V+ L++ + E +LP D++ A
Sbjct: 267 VITSLTGAVFGALLQNPVVIVIIAAIFVVLSLSMFGVYEFKLP---DSW-VAKAGGAKGG 322
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
A+ GLT + A+PC P + L+ YVA DPL G + G P L A F
Sbjct: 323 YYGAFFMGLTMGIVAAPCIGPFVLGLVTYVAAKGDPLFGFLMFFVLALGLGLPYLFLAIF 382
Query: 298 AGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFPTTMA 340
+G +++L + + + G +LLG LY FL L P ++
Sbjct: 383 SGKIKNLPRAGMWMDAVKHIFGFILLGMALY-FLLPLLPKNIS 424
>gi|160936755|ref|ZP_02084122.1| hypothetical protein CLOBOL_01646 [Clostridium bolteae ATCC
BAA-613]
gi|158440546|gb|EDP18291.1| hypothetical protein CLOBOL_01646 [Clostridium bolteae ATCC
BAA-613]
Length = 240
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 21/226 (9%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSG---------KSRAQIIGDSIAFSLGL 171
L + AGL++ SPC + +LP+ YI F +G + R + + S F G+
Sbjct: 16 LGTVLTAGLLSFFSPCIVPLLPV---YISVFSAGSGAAQEDIFQRRIRTLFKSCLFVAGI 72
Query: 172 ATTLALLGVGASFAGKAYGQIGTGLPLAASGL-AIVMGLNLLEIIELQLPSFFDNFD-PR 229
+T +LG GA G IG+ + A GL IV+GL+ +I ++ S+ + R
Sbjct: 73 STCFIILGFGAGALGSI---IGSSFFMTAIGLIVIVLGLHQTGLIHIKWLSYEKKVNLKR 129
Query: 230 AAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVA 289
+ +++ +L GLTF+ +PC PVL +LG ATS P GG L+ Y+ G++
Sbjct: 130 SHRSDY---FGVFLLGLTFSFGWTPCIGPVLGAILGLSATSSRPFYGGFLMAVYSLGFLI 186
Query: 290 PLLLAASFAGA-LQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
P L+ A F+ LQ + K I G +++ G+ D L
Sbjct: 187 PFLILALFSDVLLQRIKKLNKHLGKIKAAGGVVIIMMGILLMTDNL 232
>gi|338738734|ref|YP_004675696.1| cytochrome c biogenesis protein transmembrane region
[Hyphomicrobium sp. MC1]
gi|337759297|emb|CCB65126.1| Cytochrome c biogenesis protein transmembrane region
[Hyphomicrobium sp. MC1]
Length = 265
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 101/198 (51%), Gaps = 19/198 (9%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG----SGKSRA------QIIGDSIAFSLGLATTLA 176
AGLV+ LSPC L ++P LGYIG +G+ + +++ ++ F LG T
Sbjct: 14 AGLVSFLSPCVLPLVPPYLGYIGGTTLDQLTGEDKIDRRVWLRVVASAVFFVLGFTTVFV 73
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
LG GAS G+ L AA + I+ GL+ L I+++ +F+ + R +AA
Sbjct: 74 SLGAGASTIGQVLLSYRAALGTAAGVVIILFGLHFLGILKIH--AFYK--EARYSAAEME 129
Query: 237 SSV-QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
+S AY+ GL FA +PC PVLAT+L A+ G LLL Y+ G P +LAA
Sbjct: 130 ASFFGAYIMGLAFAFGWTPCIGPVLATVLTLAASENSLATGVKLLLIYSLGLGVPFILAA 189
Query: 296 SFAGALQSLLSF-RKFSS 312
A++ L F +KF
Sbjct: 190 V---AVRPFLGFMQKFKR 204
>gi|452995149|emb|CCQ93217.1| Cytochrome c-type biogenesis protein CcdA [Clostridium ultunense
Esp]
Length = 244
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 102/228 (44%), Gaps = 8/228 (3%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFG----SGKSRAQIIGDSIAFSLGLATT 174
SL + FGAG ++ SPC L ++P+ + Y+ + R + + F +G
Sbjct: 19 VSLPIAFGAGFLSFFSPCILPLIPVYIMYMTGVNLESEMEERRLIALTRTTGFVIGFTII 78
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
++G ASF GK + + + L ++ GLN++ II+ + + +N
Sbjct: 79 FMIMGTSASFIGKIFIRNKEIFSKVSGALIVIFGLNMMGIIKFRFLNMEKKMKAPKKVSN 138
Query: 235 FPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
+ SS+ L G+ FA +PC PVLA++L Y + G LL Y+ G P LL
Sbjct: 139 WFSSI---LMGMAFAAGWTPCFGPVLASILIYAGGAATVSKGIYLLFIYSVGMAIPFLLT 195
Query: 295 ASFAGALQSLLS-FRKFSSWINPMSGALLLGGGLYTFLDRLFPTTMAM 341
A F L K +I + G +++ G+ F +++ + M
Sbjct: 196 ALFINVFSKFLEKMEKVMVYIPKIGGLIMVIFGMLVFFNKVIDISRLM 243
>gi|153006962|ref|YP_001381287.1| cytochrome c biogenesis protein transmembrane region
[Anaeromyxobacter sp. Fw109-5]
gi|152030535|gb|ABS28303.1| cytochrome c biogenesis protein transmembrane region
[Anaeromyxobacter sp. Fw109-5]
Length = 399
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 112/220 (50%), Gaps = 10/220 (4%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGA-----FGSGKSRAQIIGDSIAFSLGLATTLALL 178
+F AGL+T LSPC L ++P+ LG +G +G +R +++ + AFSLGLA+ L
Sbjct: 8 LFAAGLLTFLSPCVLPLVPIYLGLLGGASASDVRAGSARGRLVATAGAFSLGLASVFVAL 67
Query: 179 GVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSS 238
G+GAS AG L A + + GL L + L+LP P A A S
Sbjct: 68 GLGASAAGALLEAHRETLLRVAGVVVVAFGLKFLGL--LRLPGLDRERRPLLARAAPGGS 125
Query: 239 VQAYLA-GLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLL-SYTTGYVAPLLLAAS 296
+ A A G FAL +PC PVL ++L Y +S G L L +Y G VAPLL+AA+
Sbjct: 126 LLASFAFGGAFALGWTPCIGPVLGSVLTYTVSSGASAARGALYLATYAAGLVAPLLVAAA 185
Query: 297 FA-GALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLF 335
FA AL+ L + + +GALL+ G DRL
Sbjct: 186 FAPRALRLLDRVKPHLRKVELATGALLVAVGALLATDRLM 225
>gi|254476134|ref|ZP_05089520.1| sulfur oxidation V protein [Ruegeria sp. R11]
gi|214030377|gb|EEB71212.1| sulfur oxidation V protein [Ruegeria sp. R11]
Length = 245
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 16/209 (7%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ----------IIGDSIAFSLGLATTLA 176
AGL++ +PC L ++P L Y+G + R + ++ S+ F+ G+ T
Sbjct: 12 AGLLSFFTPCVLPMVPFYLSYMGGLSMAELRGKAVIAPGAQRRLVLASLVFAAGVTTVFV 71
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
L+G+GA+ G+ +GQ L A+ + + GL+ L ++ + L D A P
Sbjct: 72 LMGMGATALGQLFGQYMDVLSYVAAVILLAFGLHFLGVVRIPLLYREARIDSTAE----P 127
Query: 237 SSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
S++ AYL GL F +PC P LA++L + D GG LL Y P ++AA
Sbjct: 128 STLAGAYLMGLAFGFGWTPCVGPALASILMIASGMGDVWRGGVLLFVYGAAMTTPFVVAA 187
Query: 296 SFAGALQSLLS-FRKFSSWINPMSGALLL 323
FAG S +S R W+ G +L+
Sbjct: 188 LFAGPFLSFVSRHRAAFVWVEKGMGVMLI 216
>gi|149916474|ref|ZP_01904992.1| sulfur oxidation V protein [Roseobacter sp. AzwK-3b]
gi|149809645|gb|EDM69500.1| sulfur oxidation V protein [Roseobacter sp. AzwK-3b]
Length = 245
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 111/211 (52%), Gaps = 20/211 (9%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYI-----------GAFGSGKSRAQIIGDSIAFSLGLATTL 175
AGL++ +PC L ++P L Y+ GA G + +I ++ F+LG+ T
Sbjct: 12 AGLLSFFTPCILPMVPFYLCYMAGLSMTELRGDGAIAPGAQKRLVI-SAVMFALGVTTIF 70
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LLG+GA+ G+A+ Q L A+G+ + GL+ L ++ ++P + + R ++
Sbjct: 71 VLLGMGATALGQAFAQWRDPLSYVAAGILALFGLHFLGVV--RIPLLYR--EARMESSAE 126
Query: 236 PSSV-QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLI-GGTLLLSYTTGYVAPLLL 293
P++V AY+ GL F +PC P LA +L VA+ L G LL+ Y AP ++
Sbjct: 127 PTTVIGAYVMGLAFGFGWTPCVGPALAAIL-MVASGMGSLTEGAALLMVYGLAMTAPFVV 185
Query: 294 AASFAGA-LQSLLSFRKFSSWINPMSGALLL 323
AA FA L + S RK+ +++ + GA+L+
Sbjct: 186 AAFFARPFLAWIQSKRKYMAYVEKVMGAMLI 216
>gi|89897421|ref|YP_520908.1| hypothetical protein DSY4675 [Desulfitobacterium hafniense Y51]
gi|89336869|dbj|BAE86464.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 229
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 107/208 (51%), Gaps = 12/208 (5%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ-IIGDSIAFSLGLATTLALLGVGASFA 185
AG++TS +PC+LS +PL + Y+G G+G+ A+ SI F+LG A T LGV AS A
Sbjct: 26 AGVLTSFTPCSLSSIPLVISYVG--GTGQRDAKKAFWLSITFALGAAVTFTTLGVSASIA 83
Query: 186 GKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAG 245
G+ G + + L ++M L I E+ S+ + + + A++AG
Sbjct: 84 GRLIGTSASWWYIILGILMLLMALQTWGIYEIIPSSYLVSKNTKRGYLG------AFIAG 137
Query: 246 LTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLL 305
+ + +SPCSTPVL LL VA G LLL Y+ G+ ++A + G +Q L
Sbjct: 138 ILGGVFSSPCSTPVLIALLAIVAGKGSIFWGILLLLMYSIGHGILAIVAGTSIGFVQKLS 197
Query: 306 SFRKF---SSWINPMSGALLLGGGLYTF 330
S K+ S+ + + G L+L G Y F
Sbjct: 198 SSEKYGKTSTILKIVMGTLILLIGFYMF 225
>gi|114704728|ref|ZP_01437636.1| c-type cytochrome biogenesis protein [Fulvimarina pelagi HTCC2506]
gi|114539513|gb|EAU42633.1| c-type cytochrome biogenesis protein [Fulvimarina pelagi HTCC2506]
Length = 246
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 103/210 (49%), Gaps = 18/210 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRA----------QIIGDSIAFSLGLATTLA 176
AG ++ LSPC L ++P L Y+ + RA +++ S+ F LG +T
Sbjct: 13 AGALSFLSPCVLPLVPPYLCYMAGVSADDLRAGARSESVRQGRLLLASVVFVLGFSTVFV 72
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
LG GAS G + L + A IVMGLN L + L F + R + P
Sbjct: 73 ALGAGASTIGGLLRHNLSWLGIVAGIAIIVMGLNFLGVFRLS----FLAREKRFRGPDSP 128
Query: 237 SSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPLLLA 294
+ V AYL GL FA +PC PVL +LG +A S+D + G +L+ Y+ G P +LA
Sbjct: 129 AGVVGAYLMGLAFAFGWTPCIGPVLGAILG-LAGSRDTVGEGAFMLAVYSAGLGVPFILA 187
Query: 295 ASFAGALQSLL-SFRKFSSWINPMSGALLL 323
A+F+GA S L FR+ + G LL+
Sbjct: 188 ATFSGAFLSWLGGFRRHLKTVERTMGGLLV 217
>gi|326792240|ref|YP_004310061.1| cytochrome C biogenesis protein transmembrane region [Clostridium
lentocellum DSM 5427]
gi|326543004|gb|ADZ84863.1| cytochrome c biogenesis protein transmembrane region [Clostridium
lentocellum DSM 5427]
Length = 398
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 107/221 (48%), Gaps = 23/221 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSG-----KSRAQIIGDSIAFSLGLATT 174
+L V+F GLV+ LSPC L +LP+ L + ++R ++ +++ F LG++TT
Sbjct: 5 NLVVVFIEGLVSFLSPCVLPILPVYLAMLSQNTDNEGQAKRNRKTLLINTLLFVLGISTT 64
Query: 175 LALLGVGASFAGK---AYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAA 231
+LG G F + + GL + ++LL+I ELQ R
Sbjct: 65 FLILGTGVGFIRPFLMSNKNVFLGLGGLLIIGMGLFYMDLLKIDELQ----------REK 114
Query: 232 AANFP----SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGY 287
++ + + AY+ G TF+ +PC P+LA++L +TS + L G L+ YT G+
Sbjct: 115 RMHYQVKKMNPLAAYILGFTFSFGWTPCIGPMLASVLVVASTSSNALTGYLLIGVYTLGF 174
Query: 288 VAPLLLAASFAGALQSLLSFRKFSSW-INPMSGALLLGGGL 327
V P LL A FA + LL K I + G LL+ GL
Sbjct: 175 VVPFLLLAVFAEKMIELLERVKSKGLSIKRIGGMLLVLTGL 215
>gi|87300598|ref|ZP_01083440.1| hypothetical protein WH5701_04100 [Synechococcus sp. WH 5701]
gi|87284469|gb|EAQ76421.1| hypothetical protein WH5701_04100 [Synechococcus sp. WH 5701]
Length = 273
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 85/165 (51%), Gaps = 11/165 (6%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASF 184
F GL+ S+SPC L++LPL LGYIG G SR Q + F G T L+L G+ ASF
Sbjct: 68 FAGGLLASVSPCVLAMLPLNLGYIGTLGP-LSRRQAVVRVGGFVAGTVTVLSLYGLVASF 126
Query: 185 AGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLA 244
A + LA + + MGL+L + L+LP + P S +L
Sbjct: 127 ASAVVVDHRGPVHLAVGLVILAMGLHLRGWLPLRLPRMPE----------LPPSGGPFLV 176
Query: 245 GLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVA 289
G+ FAL +SPC++PVL ++L A + ++ ++SY GY A
Sbjct: 177 GIGFALVSSPCASPVLFSVLAAAAATGSGVLSVITMVSYALGYTA 221
>gi|126735808|ref|ZP_01751553.1| putative cytochrome c-type biogenesis protein CcdA [Roseobacter sp.
CCS2]
gi|126714995|gb|EBA11861.1| putative cytochrome c-type biogenesis protein CcdA [Roseobacter sp.
CCS2]
Length = 251
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 99/208 (47%), Gaps = 10/208 (4%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGK------SRAQIIGDSIAFSLGLATTLALLGV 180
AG+++ LSPC L V+P L Y+G + +R ++ +I F LGL+T LLG+
Sbjct: 22 AGILSFLSPCVLPVVPPYLAYMGGVSVSEMEETKTARRRVFVSAIFFVLGLSTIFLLLGL 81
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
S G+ Q+ + A L +V+G + + + + F D A S+
Sbjct: 82 AFSTMGRMLLQVQDWFVIVAGALIMVLGAHFVGVFRI---GFLDRELRVDAGDKGGSAFG 138
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGA 300
AYL GL FA +PC P+L +L A+ D G LL Y G P LL A+F
Sbjct: 139 AYLLGLAFAFGWTPCLGPILGAILSLAASEADVSRGTVLLAVYALGLGIPFLLVAAFFPR 198
Query: 301 LQSLLSF-RKFSSWINPMSGALLLGGGL 327
L+ ++ + ++ I +SG LL GL
Sbjct: 199 LKGVMGWMKRHMDRIEKVSGLLLWTVGL 226
>gi|312621904|ref|YP_004023517.1| cytochrome c biogenesis protein transmembrane region
[Caldicellulosiruptor kronotskyensis 2002]
gi|312202371|gb|ADQ45698.1| cytochrome c biogenesis protein transmembrane region
[Caldicellulosiruptor kronotskyensis 2002]
Length = 215
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAG 186
AG ++ SPC L ++P+ + Y+ F SR + +S+ F LG + +LGV A+ G
Sbjct: 11 AGFLSFFSPCILPLIPVYVLYL--FSQKGSRLK---NSLLFVLGFSIVFVVLGVLAAAVG 65
Query: 187 KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDN-FDPRAAAANFPSSVQAYLAG 245
+ L A+ + ++MGL +L++ P F F P N + + G
Sbjct: 66 SVFSGYSFLLKKIAAIVIVLMGLVMLDLS----PDFLKRIFIPIQGKGNLDINASPLILG 121
Query: 246 LTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLL 305
+ +++ +PC PVL ++L A SK L G LL Y+ G+ P L+++ L++
Sbjct: 122 MVLSISWTPCVGPVLTSILSMAAISKTLLKGAMLLFIYSIGFAVPFLISSFLIDRLKAFF 181
Query: 306 -SFRKFSSWINPMSGALLLGGGLYTFLDRL 334
++S I +GALL+ G+ F D++
Sbjct: 182 GMLNRYSRAIEYFTGALLIAFGMLAFFDKI 211
>gi|254451587|ref|ZP_05065024.1| cytochrome c biogenesis protein CcdA [Octadecabacter arcticus 238]
gi|198265993|gb|EDY90263.1| cytochrome c biogenesis protein CcdA [Octadecabacter arcticus 238]
Length = 240
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 104/215 (48%), Gaps = 10/215 (4%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAF------GSGKSRAQIIGDSIAFSLGLAT 173
+L V F AG+++ LSPC L ++P L Y+G + +R + + S+ F LGL+T
Sbjct: 4 ALLVAFSAGILSFLSPCVLPIVPPYLAYMGGVSVTDMEDNRAARGRAVVASLFFVLGLST 63
Query: 174 TLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAA 233
+LG GAS G+A+ L + A + ++ GL+ L + L+ F D A
Sbjct: 64 VFLILGAGASALGRAFASYRPYLEVGAGVVVVIFGLHFLGLFRLK---FLDREMRMDAGD 120
Query: 234 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
S+ AY GL FA +PC P+L+ +L D G LL Y G P +L
Sbjct: 121 QGGSAFGAYFLGLAFAFGWTPCLGPILSAILSLAGGQADVSKGVMLLGVYAIGLGVPFVL 180
Query: 294 AASFAGALQSLLSFRKFS-SWINPMSGALLLGGGL 327
A+F ++ +++ K + I SG LL+ GL
Sbjct: 181 VAAFFPQMKRPMAWMKRNMGVIEKTSGVLLVVVGL 215
>gi|146296079|ref|YP_001179850.1| cytochrome c biogenesis transmembrane protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409655|gb|ABP66659.1| cytochrome c biogenesis protein, transmembrane region
[Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 215
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAG 186
AG ++ SPC L ++P+ + YI + R + ++ F LG + LG+ AS G
Sbjct: 11 AGFLSFFSPCILPLVPVYILYIFS-----QRGSKLKNAFLFVLGFSIVFVGLGILASLFG 65
Query: 187 KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDN-FDPRAAAANFPSSVQAYLAG 245
A+ Q + A+ + I+MGL +L++ P F F P N+ + G
Sbjct: 66 VAFSQYKWVIVKIAAIILILMGLVMLDL----SPDFLKRLFIPIGGNGNYQKERIPLILG 121
Query: 246 LTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLL 305
+ +++ +PC P+LA++L A K + G LL+ Y+ G+ P LLA+ F ++S
Sbjct: 122 MLLSISWTPCVGPILASILSLAAVQKTFVKGVLLLVFYSIGFAMPFLLASLFIERIKSFF 181
Query: 306 SF-RKFSSWINPMSGALLLGGGLYTFLDRL 334
SF + + ++G ++ G+ F D++
Sbjct: 182 SFINRHVKVVEYLAGIFMVIFGVLVFFDKI 211
>gi|359791986|ref|ZP_09294817.1| cytochrome c-type biogenesis protein CcdA [Mesorhizobium alhagi
CCNWXJ12-2]
gi|359251911|gb|EHK55217.1| cytochrome c-type biogenesis protein CcdA [Mesorhizobium alhagi
CCNWXJ12-2]
Length = 249
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 102/217 (47%), Gaps = 17/217 (7%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYI-------------GAFGSGKSRAQIIGDSIAFSLGLA 172
GAG ++ LSPC L ++P L Y+ GA +R+ ++ S AF LG
Sbjct: 12 GAGAISFLSPCVLPLVPPYLCYMAGVSVEDFRADGGGAAVKSGTRSALLVTSFAFVLGFT 71
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
T LG GAS G+ L +AA L I+MGLN L ++ + S F +
Sbjct: 72 TVFVALGAGASTIGRLLRVWQDPLAMAAGVLIILMGLNFLGVLRIPFLSREARFQSQGKP 131
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
A S++ AY+ GL FA +PC PVL +L + G LL +Y+ G P L
Sbjct: 132 A---STLAAYVMGLAFAFGWTPCIGPVLGPILTLAGGRETVGEGAALLAAYSLGLGIPFL 188
Query: 293 LAASFAGALQSLL-SFRKFSSWINPMSGALLLGGGLY 328
+AA F+GA L F+ + GA+L+ G++
Sbjct: 189 VAALFSGAFMRFLGRFKVHLGRVEKAIGAMLVVAGVF 225
>gi|373486247|ref|ZP_09576923.1| cytochrome c biogenesis protein transmembrane region [Holophaga
foetida DSM 6591]
gi|372012152|gb|EHP12730.1| cytochrome c biogenesis protein transmembrane region [Holophaga
foetida DSM 6591]
Length = 236
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 103/221 (46%), Gaps = 16/221 (7%)
Query: 117 SFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLA 176
++ L ++F GL+TS +PC L PL +G+ G G+ + R + S F LGLA
Sbjct: 17 AYQQLGIVFLGGLLTSANPCVLVAAPLVVGFTG--GTSEGRHHPVVLSGVFVLGLAAAFT 74
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSF--FDNFDPRAAAAN 234
LG+ A+ +G G IG G + + +GL+LL + L + F
Sbjct: 75 ALGLLAAISGSLLGDIGWGWKAILGLVLLAIGLHLLGLYSLPFKAHGHLHRFQGAGLLGA 134
Query: 235 FPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
F L GLT L+A PC+TP LA +L VA K L GG LL Y G+V L LA
Sbjct: 135 FA------LGGLTGTLSA-PCATPALAAVLTLVALQKQVLWGGVLLFVYALGHVLLLFLA 187
Query: 295 ASFAGA----LQSLLSFRKFSSWINPMSGALLLGGGLYTFL 331
+ +G QS S R W+ G LL G L+ L
Sbjct: 188 GASSGWASKYAQSRFS-RVLGRWLPKAMGLLLCGCALWVLL 227
>gi|398828359|ref|ZP_10586560.1| cytochrome c biogenesis protein [Phyllobacterium sp. YR531]
gi|398218394|gb|EJN04904.1| cytochrome c biogenesis protein [Phyllobacterium sp. YR531]
Length = 248
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 103/226 (45%), Gaps = 25/226 (11%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ------------IIGDSIAFSLGLAT 173
GAG ++ LSPC L ++P L Y+ RA ++ S F LG T
Sbjct: 12 GAGALSFLSPCVLPLVPPYLCYMAGVTVEDFRADAPAARISPVRRALLLSSFCFVLGFTT 71
Query: 174 TLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAA 233
LLG GAS G + + A + I+MGLN L + L S F + A
Sbjct: 72 VFVLLGAGASTIGGFLRMWQQEIAIVAGVVIILMGLNFLGVFRLAFLSREARFQSQGTPA 131
Query: 234 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPLL 292
N AY+ GL FA +PC PVL +L +A ++D + G LLL+ Y+ G P +
Sbjct: 132 N---PFAAYVMGLAFAFGWTPCIGPVLGPILA-LAGARDTVSDGALLLAVYSLGLGIPFI 187
Query: 293 LAASFAGALQSLLS-FR-------KFSSWINPMSGALLLGGGLYTF 330
+AA F+G LS FR K + ++G L L GGL TF
Sbjct: 188 IAALFSGMFMRFLSRFRMHLGKVEKIMGVLLVITGVLFLTGGLQTF 233
>gi|307942220|ref|ZP_07657571.1| cytochrome c-type biogenesis protein CcdA [Roseibium sp. TrichSKD4]
gi|307774506|gb|EFO33716.1| cytochrome c-type biogenesis protein CcdA [Roseibium sp. TrichSKD4]
Length = 245
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 99/203 (48%), Gaps = 17/203 (8%)
Query: 133 LSPCTLSVLPLTLGYIGAFG----SGKSRAQ-----IIGDSIAFSLGLATTLALLGVGAS 183
+SPC L ++P LGY+ SG+ Q + ++AF G +T +LG AS
Sbjct: 19 ISPCVLPLVPPYLGYLAGVSLEELSGEDVDQAATRKVFFTALAFVAGFSTVFVILGASAS 78
Query: 184 FAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS-SVQAY 242
G+ Q L A L IVMGL+ L + ++ F + R P+ V AY
Sbjct: 79 LIGQFVSQYLQYLSYIAGALIIVMGLHFLGVFKIG----FLYQEARVQVERKPAGHVGAY 134
Query: 243 LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPLLLAASFAGAL 301
L GL FA +PC P+LAT+L +VA S++ G +LLS Y G P LLAA FAG
Sbjct: 135 LMGLAFAFGWTPCVGPILATIL-FVAGSEETTGQGAILLSAYALGLGIPFLLAALFAGPF 193
Query: 302 QSLL-SFRKFSSWINPMSGALLL 323
+ + FRK + G +L+
Sbjct: 194 LNFMKKFRKHMGTVEKGMGVVLV 216
>gi|383788727|ref|YP_005473296.1| putative cytochrome c-type biogenesis protein CcdA [Caldisericum
exile AZM16c01]
gi|381364364|dbj|BAL81193.1| putative cytochrome c-type biogenesis protein CcdA [Caldisericum
exile AZM16c01]
Length = 304
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 16/211 (7%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYI-----GAFGSGK-SRAQIIGDSIAFSLGLATTLALLGV 180
AG V+ +SPC L ++P + YI SG+ S +++ +S+AF LG + LLG
Sbjct: 14 AGFVSFISPCVLPLIPAYISYITGETLSELKSGETSTKKLLINSVAFVLGFSVVFILLGA 73
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
A+F GK + A + I+ GL+ +I+ + + R + PS ++
Sbjct: 74 TATFVGKFLSRNKKLFEFIAGIIVIIFGLHTAQIVRFNFLGYEKKMNVRTST---PSLLK 130
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA----S 296
A+L G F+ +PC P+L T+L T L G LL Y+ G P ++ A
Sbjct: 131 AFLMGFAFSFGWTPCVGPILGTILIMAGTHSQVLQGIILLTFYSLGLGIPFVITALAINK 190
Query: 297 FAGALQSLLSFRKFSSWINPMSGALLLGGGL 327
F A +++ +++ + +G L++G GL
Sbjct: 191 FFDAFKAI---KRYFGQVEMFAGLLIIGIGL 218
>gi|328543949|ref|YP_004304058.1| cytochrome C biogenesis protein transmembrane region [Polymorphum
gilvum SL003B-26A1]
gi|326413693|gb|ADZ70756.1| Cytochrome C biogenesis protein transmembrane region [Polymorphum
gilvum SL003B-26A1]
Length = 245
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 106/213 (49%), Gaps = 17/213 (7%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYI---------GAFGSGKSRAQIIGDSIAFSLGLATTLAL 177
AG+++ +SPC L ++P LG++ G G ++ ++ ++AF G +T L
Sbjct: 13 AGILSFISPCVLPLVPPYLGFLAGTSLEELTGEGGESEAGRRVFLSALAFVAGFSTVFVL 72
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
LG AS G+ Q L A + IVMGL+ L + + L + R A P+
Sbjct: 73 LGASASLIGQFVTQHIQFLGYVAGVMIIVMGLHFLGVFRIGL----LYREARVHVARKPA 128
Query: 238 SVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPLLLAA 295
+ AYL GL FA +PC P+LA +L +VA S++ + G LLLS Y G P L AA
Sbjct: 129 GLAGAYLIGLAFAFGWTPCVGPILAAIL-FVAGSEETVAQGALLLSAYALGLGIPFLAAA 187
Query: 296 SFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
FAG + + FR+ + G +L+ G+
Sbjct: 188 LFAGPFLAFMKRFRRHMGAVEKAMGVVLVATGV 220
>gi|291278605|ref|YP_003495440.1| cytochrome c-type biogenesis protein [Deferribacter desulfuricans
SSM1]
gi|290753307|dbj|BAI79684.1| cytochrome c-type biogenesis protein [Deferribacter desulfuricans
SSM1]
Length = 265
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 113/237 (47%), Gaps = 33/237 (13%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS------------RAQIIGDSIAFSLGLA 172
F AG+++ LSPC VLPL GYI +F SG+S + + I +I F +G
Sbjct: 30 FIAGILSFLSPC---VLPLIPGYI-SFISGESVESLTENSSLSPKVKAIIGAIFFGIGFT 85
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQ--LPSFFDNFDPRA 230
LLG A+ GK Q L A + I++GL+++ I +++ L N+ R
Sbjct: 86 LIFMLLGASATSIGKLINQYRPILEKIAGIIVIILGLHMVGIFKIKKLLVQKKWNYQKR- 144
Query: 231 AAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAP 290
N P ++A+L G+ F +PC P+LA +L A + G +LL Y+ G P
Sbjct: 145 ---NSPFFIEAFLLGVAFVFGWTPCIGPILAGILALAAKENTVMQGVSLLFVYSLGLWIP 201
Query: 291 LLLAASFAG-ALQSLLSFRKFSSWINPMSGALLLGGG----------LYTFLDRLFP 336
L+AA G L +L K I +SGALL+ G + ++L RLFP
Sbjct: 202 FLIAAIMLGFVLSALKKAGKLLIIIEKISGALLIFIGVLILSGSMTAVISYLMRLFP 258
>gi|86137341|ref|ZP_01055918.1| sulfur oxidation V protein [Roseobacter sp. MED193]
gi|85825676|gb|EAQ45874.1| sulfur oxidation V protein [Roseobacter sp. MED193]
Length = 245
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 105/209 (50%), Gaps = 16/209 (7%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRA----------QIIGDSIAFSLGLATTLA 176
AGL++ +PC L ++P L Y+G + R+ +++ ++ F+ G+ +
Sbjct: 12 AGLLSFFTPCILPMVPFYLSYLGGLSMAELRSDGEIAPGAQRRMVMAALCFAAGVTSVFM 71
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
L+G+GA+ G+ +GQ L A+ + +V GL+ L +I + L + R ++ P
Sbjct: 72 LMGMGATALGQLFGQYMEILSYGAALILVVFGLHFLGVIRIGL----LYREARVESSADP 127
Query: 237 SSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
SS+ AYL GL F +PC P LA++L + + GG LL Y AP ++AA
Sbjct: 128 SSLAGAYLMGLAFGFGWTPCVGPALASILMVASGLGEIWRGGALLFVYGAAMTAPFVVAA 187
Query: 296 SFAGALQSLLS-FRKFSSWINPMSGALLL 323
FA + ++ R W+ + GA+L+
Sbjct: 188 LFAKPFLAWVARHRAAFHWVEKIMGAMLI 216
>gi|430003763|emb|CCF19552.1| Cytochrome c biogenesis protein transmembrane region [Rhizobium
sp.]
Length = 249
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 103/215 (47%), Gaps = 18/215 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAF------GSGKS------RAQIIGDSIAFSLGLATT 174
AG ++ LSPC L ++P L Y+ G G S R ++ ++ F+LG AT
Sbjct: 14 AGALSFLSPCVLPLVPPYLCYMAGISVDQFRGEGPSEAAVATRRAVLTAAVFFTLGFATV 73
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
LG GAS G Q L + I MGLN L + + L S + R ++
Sbjct: 74 FVALGAGASTIGVLLRQHLDLLSKIGGLIIIAMGLNFLGVFRIGLLSR----EARFQSSG 129
Query: 235 FPSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
P+++ AY+ GL FA +PC PVL +LG A+ + G TLL Y+ G P +
Sbjct: 130 KPATLSGAYVMGLAFAFGWTPCIGPVLGAILGVAASRETVGDGATLLAVYSLGLAVPFWI 189
Query: 294 AASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
AA F+G+ LS FR+ + + G LL+ GL
Sbjct: 190 AAGFSGSFMRFLSRFRRHLGAVEKVMGVLLVLTGL 224
>gi|390450983|ref|ZP_10236567.1| cytochrome c-type biogenesis protein CcdA [Nitratireductor
aquibiodomus RA22]
gi|389661745|gb|EIM73344.1| cytochrome c-type biogenesis protein CcdA [Nitratireductor
aquibiodomus RA22]
Length = 252
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 108/217 (49%), Gaps = 24/217 (11%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYI-----------GAFGSGKS-----RAQIIGDSIAFSL 169
GAG ++ LSPC L ++P L Y+ GA G+G S R + S++F L
Sbjct: 12 GAGALSFLSPCVLPLVPPYLCYMAGVSVEQFQGEGADGTGASSGGATRFALFAASVSFVL 71
Query: 170 GLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR 229
G T LLG GAS G L + A + I+MGLN L ++ + F + + R
Sbjct: 72 GFTTVFVLLGAGASTIGAVLRAWQQELAILAGIVIIIMGLNFLGVVRIP----FLSREAR 127
Query: 230 AAAANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGY 287
A P++ + AY+ GL FA +PC PVL +L +A ++ + G LLL+ Y+ G
Sbjct: 128 FQAGGKPATRLGAYVMGLAFAFGWTPCIGPVLGPIL-TLAGGRETVGDGALLLAVYSLGL 186
Query: 288 VAPLLLAASFAGALQSLLS-FRKFSSWINPMSGALLL 323
P LLAA F+G+ L+ FR I + G LL+
Sbjct: 187 GVPFLLAALFSGSFMRFLARFRMQLGRIEKIMGGLLV 223
>gi|254469551|ref|ZP_05082956.1| cytochrome c biogenesis protein, transmembrane region [Pseudovibrio
sp. JE062]
gi|374331695|ref|YP_005081879.1| Cytochrome c assembly protein, transmembrane region
domain-containing protein [Pseudovibrio sp. FO-BEG1]
gi|211961386|gb|EEA96581.1| cytochrome c biogenesis protein, transmembrane region [Pseudovibrio
sp. JE062]
gi|359344483|gb|AEV37857.1| protein containing Cytochrome c assembly protein, transmembrane
region domain [Pseudovibrio sp. FO-BEG1]
Length = 245
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFG------SGKSRAQ---IIGDSIAFSLGLATTL 175
F AG+++ +SPC L ++P LGYI KS AQ ++ ++ F G +T
Sbjct: 11 FFAGILSFVSPCVLPLVPPYLGYIAGLSIEEVTSKDKSAAQSNRVMIAAMCFVAGFSTVF 70
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LLG ASF G+ Q L A + I+MGL+ L ++ F + R
Sbjct: 71 VLLGASASFLGQFVLQYSQYLAYVAGAMIIIMGLHFLGAFKIG----FLYREARVQIDRQ 126
Query: 236 PSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
P AYL GL F +PC PVLA++L T G LL +Y G P ++A
Sbjct: 127 PGGFGGAYLMGLAFGFGWTPCIGPVLASILLIAGTQASVNQGVILLAAYALGIGVPFMIA 186
Query: 295 ASFAGALQSLLS-FRKFSSWINPMSGALLL 323
A FAG ++ FRK + + GA L+
Sbjct: 187 AMFAGPFMGFMARFRKHMGTVEKVMGAFLV 216
>gi|431793534|ref|YP_007220439.1| cytochrome c biogenesis protein [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430783760|gb|AGA69043.1| cytochrome c biogenesis protein [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 222
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 4/202 (1%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGA 182
++F G++T +SPC L +LP+ + Y GS + + + +++AF LG LG A
Sbjct: 5 LLFLEGIITFISPCLLPMLPIYISYFAGQGSEDKKQKALTNALAFVLGFTLVFITLGAFA 64
Query: 183 SFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAY 242
G Q TG+ +A+ + I+ GLN L ++ + + + + F SS+
Sbjct: 65 GTVGNVLRQYSTGVNIASGLIVILFGLNFLGVLRIPFLNRYRQLEANVVKLGFFSSL--- 121
Query: 243 LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQ 302
L G+ F++ +PC L + L + A+ L G +LL ++ G P + +A L+
Sbjct: 122 LFGIIFSIGWTPCVGAFLGSALMFAASEGGTLKGVIMLLCFSLGLGIPFIASAVLIDRLK 181
Query: 303 SLLSF-RKFSSWINPMSGALLL 323
S L F ++ IN SG LL+
Sbjct: 182 STLDFIKRNYRLINLFSGGLLV 203
>gi|126732567|ref|ZP_01748365.1| sulfur oxidation V protein [Sagittula stellata E-37]
gi|126707013|gb|EBA06081.1| sulfur oxidation V protein [Sagittula stellata E-37]
Length = 245
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 16/209 (7%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR----------AQIIGDSIAFSLGLATTLA 176
AGL++ +PC L ++P L Y+ + R ++I ++ F+ G+ T
Sbjct: 12 AGLLSFFTPCILPMVPFYLCYMAGISMAELRDDAGIPPGAQKRLIVSAVFFAAGVTTIFV 71
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
LLG+GA+ G+A+ L A+ + V GL+ L +I + L D +A P
Sbjct: 72 LLGMGATAVGQAFADWKQPLSYVAAAILFVFGLHFLGVIRIGLLYREARVDSKAE----P 127
Query: 237 SSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
+++ AY+ GL F +PC P LA++L + D GG LLL Y G AP ++AA
Sbjct: 128 TTLMGAYVMGLAFGFGWTPCVGPALASILMIASGMGDIWRGGLLLLVYGIGMTAPFVIAA 187
Query: 296 SFAGA-LQSLLSFRKFSSWINPMSGALLL 323
F+G L+ R ++ + G +L+
Sbjct: 188 LFSGPFLKWTARHRSKLQYVEKVMGVMLI 216
>gi|254440290|ref|ZP_05053784.1| Cytochrome C biogenesis protein transmembrane region
[Octadecabacter antarcticus 307]
gi|198255736|gb|EDY80050.1| Cytochrome C biogenesis protein transmembrane region
[Octadecabacter antarcticus 307]
Length = 251
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 10/215 (4%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAF------GSGKSRAQIIGDSIAFSLGLAT 173
+L + F AG+++ LSPC L ++P L Y+G + +R + + S+ F LGL+T
Sbjct: 15 ALLIAFSAGILSFLSPCVLPIVPPYLAYMGGVSVTDMEDNSAARLRAVVASLFFVLGLST 74
Query: 174 TLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAA 233
+LG GAS G+A+ L + A + I+ GL+ L + L+ F D A
Sbjct: 75 VFLVLGAGASAIGRAFASYRPYLEVGAGVVVIIFGLHFLGLFRLK---FLDREMRMEAGD 131
Query: 234 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
S+ AY GL FA +PC P+L+ +L + D G LL Y G P +L
Sbjct: 132 QGGSAFGAYFLGLAFAFGWTPCLGPILSAILSLAGSQADVSKGMLLLGVYAVGLGVPFIL 191
Query: 294 AASFAGALQSLLSFRKFS-SWINPMSGALLLGGGL 327
A+ ++ +++ K + I SG LL+ GL
Sbjct: 192 VAALFPQMKRPMAWMKRNMGVIEKTSGVLLIVIGL 226
>gi|385763539|gb|AFI78372.1| sulfur/thiosulfate oxidation protein SoxV [uncultured bacterium
ws101A12]
Length = 245
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 112/211 (53%), Gaps = 20/211 (9%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYI-----------GAFGSGKSRAQIIGDSIAFSLGLATTL 175
AGL++ +PC L ++P L Y+ GA +G ++ +++ ++AF+LG+ T
Sbjct: 12 AGLLSFFTPCILPMVPFYLCYMAGISMSELREDGAIEAG-AQTRLVISAVAFALGVTTIF 70
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LLG+GA+ G+A+ Q L A+G+ + GL+ L ++ ++P + + R +
Sbjct: 71 VLLGMGATALGQAFAQWRQPLSYVAAGVLFIFGLHFLGVV--RIPLLYR--EARIESTAE 126
Query: 236 PSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLI-GGTLLLSYTTGYVAPLLL 293
P++ + AY+ GL F +PC P LA++L VA+ L G +LLL Y AP ++
Sbjct: 127 PTTLIGAYVMGLAFGFGWTPCVGPALASIL-MVASGMGSLTQGASLLLVYGLAMTAPFVI 185
Query: 294 AASFAGALQSLLSF-RKFSSWINPMSGALLL 323
AA FA + + RK+ ++ G +L+
Sbjct: 186 AALFAKPFLAWMQRNRKYLGYVEKAMGVMLI 216
>gi|254502075|ref|ZP_05114226.1| Cytochrome C biogenesis protein transmembrane region [Labrenzia
alexandrii DFL-11]
gi|222438146|gb|EEE44825.1| Cytochrome C biogenesis protein transmembrane region [Labrenzia
alexandrii DFL-11]
Length = 246
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 110/220 (50%), Gaps = 27/220 (12%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD--------------SIAFSLGLA 172
AG+++ +SPC L ++P LGY+ +G S Q+ G+ ++ F LG +
Sbjct: 13 AGVLSFVSPCVLPLVPPYLGYL----AGVSLDQLTGEDDTDEAASRRVFFSALVFVLGFS 68
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
T LLG ASF G+ L A IVMGL+ L + ++ F + R
Sbjct: 69 TVFVLLGATASFLGQFIRMYLDYLGYIAGAAIIVMGLHFLGVFKIG----FLYKEARVHV 124
Query: 233 ANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLL-SYTTGYVAP 290
P+ + AY+ GL F +PC P+LA +L +VA +KD ++ GT+LL +Y G P
Sbjct: 125 DQKPAGPMGAYVIGLAFGFGWTPCVGPILAAIL-FVAGAKDTVLQGTVLLAAYALGLGIP 183
Query: 291 LLLAASFAGA-LQSLLSFRKFSSWINP-MSGALLLGGGLY 328
L+AA FA L+ + FRK + M G L+L G ++
Sbjct: 184 FLIAALFARPFLRFMKRFRKHMGTVEKAMGGVLVLTGIMF 223
>gi|428770885|ref|YP_007162675.1| cytochrome c biogenesis protein transmembrane region
[Cyanobacterium aponinum PCC 10605]
gi|428685164|gb|AFZ54631.1| cytochrome c biogenesis protein transmembrane region
[Cyanobacterium aponinum PCC 10605]
Length = 286
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 107/213 (50%), Gaps = 24/213 (11%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASF 184
F GL+ S+SPC L++LP+ L YIG KSR + F LG L+L G+ +SF
Sbjct: 82 FLGGLIASVSPCILALLPVNLSYIGTLKI-KSRWDAFKKAGLFVLGSVVILSLFGLVSSF 140
Query: 185 AG------KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSS 238
AG + Y I GL +A VMGL LL +I++ LP N P+A P
Sbjct: 141 AGAVMVEYRGYINIVVGLIMA------VMGLWLLGVIKINLPETELNL-PKAG----PFG 189
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFA 298
V GLTFAL +SPC++PVL +L A + ++ ++SY GY + LA+ F
Sbjct: 190 V-----GLTFALVSSPCASPVLFAVLAAAAATGSQVLATLTMVSYALGYTMLIFLASLFT 244
Query: 299 G-ALQSLLSFRKFSSWINPMSGALLLGGGLYTF 330
G A QS + I S ALL+ G Y F
Sbjct: 245 GLAKQSNNLLKHSEGIIRFGSVALLMTGAYYLF 277
>gi|150401019|ref|YP_001324785.1| cytochrome c biogenesis protein transmembrane region [Methanococcus
aeolicus Nankai-3]
gi|150013722|gb|ABR56173.1| cytochrome c biogenesis protein transmembrane region [Methanococcus
aeolicus Nankai-3]
Length = 215
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 111/216 (51%), Gaps = 13/216 (6%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
L +IF AG+ T+L PC ++VLP+ Y FG +S+ + S++F LG + +LLG
Sbjct: 2 DLFLIFIAGIFTALGPCVMTVLPIVFAY--TFGISESKTEAFIISLSFVLGFSIVFSLLG 59
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
+S G G + + A +AI+ G+ +L S + F N +S
Sbjct: 60 AVSSIFGIMIGF--SKIKYLAGIIAILFGITILLKKRFSFRSKQNIFVKIIKKLNEKTSF 117
Query: 240 Q-----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
+ + + G+++ A+ C+ PVLA +L Y A+ +D L G LL Y+ GY P++L
Sbjct: 118 KYKILTSIILGISYGFGANVCADPVLAGILTYTASKEDILFGFFALLIYSLGYGLPIILL 177
Query: 295 ASFAGALQSLLSFRKFSSW--INPMSGALLLGGGLY 328
++ + ++ K S++ IN +SG +L+ G+Y
Sbjct: 178 STLGMEGKKII--EKISNFEIINIISGLMLIILGVY 211
>gi|222148596|ref|YP_002549553.1| cytochrome c-type biogenesis protein [Agrobacterium vitis S4]
gi|221735582|gb|ACM36545.1| cytochrome c-type biogenesis protein [Agrobacterium vitis S4]
Length = 248
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----------SGKSRAQIIGDSIAFSLGLATTL 175
AG ++ LSPC L ++P L Y+ ++R+ +I ++ F+LG AT
Sbjct: 14 AGTLSFLSPCVLPLVPPYLCYMAGVSVEQFRGEAVAVDRRARSAVIFSALCFTLGFATVF 73
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LG GAS G Q L + IVMGLN L + + L + + R A
Sbjct: 74 VALGAGASSIGMMLRQHLDLLSKIGGLIIIVMGLNFLGLFRIGLLAR----EMRFAGGGK 129
Query: 236 PSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPLLL 293
P+++ AY+ GL FA +PC PVL +L VA ++D + G +LL+ Y+ G P +
Sbjct: 130 PATLTGAYVMGLAFAFGWTPCIGPVLGAILA-VAAARDTVGQGAVLLAVYSLGLAIPFWI 188
Query: 294 AASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
AA F+GA L+ FR+ + + G LL+ GL
Sbjct: 189 AAGFSGAFMRFLTRFRRHLGLVEKLMGLLLVVTGL 223
>gi|187777134|ref|ZP_02993607.1| hypothetical protein CLOSPO_00679 [Clostridium sporogenes ATCC
15579]
gi|187774062|gb|EDU37864.1| cytochrome C biogenesis protein transmembrane region [Clostridium
sporogenes ATCC 15579]
Length = 234
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 18/211 (8%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSG-------KSRAQIIGDSIAFSLGLATTL 175
++F G++T +SPC L ++P+ Y+ F G K+RA I SIAF G
Sbjct: 12 LLFLEGIITFISPCILPMIPI---YVSYFAGGDIDNKNYKNRALI--SSIAFVAGFTLVF 66
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQL--PSFFDNFDPRAAAA 233
LLGV A G + + + + + I+ GLN L II ++L SF N P
Sbjct: 67 TLLGVAAGTVGVIFNTYMREINIVSGSIMIIFGLNYLGIINVELLHRSFKIN-KPTGHKK 125
Query: 234 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
+F S L G+ F +PC P L + L + S + +G ++L+ Y+ G P +L
Sbjct: 126 SFIMSTA--LFGMIFGFGWTPCVGPFLGSALMIASNSTNVFMGASMLMIYSLGLGIPFIL 183
Query: 294 AASFAGALQSLLSF-RKFSSWINPMSGALLL 323
+A +L++ F ++ IN +SG LL+
Sbjct: 184 SALLIDSLKTTFEFIKRNYKIINRISGVLLI 214
>gi|148378264|ref|YP_001252805.1| cytochrome C biogenesis protein [Clostridium botulinum A str. ATCC
3502]
gi|153932982|ref|YP_001382666.1| cytochrome c-type biogenesis protein CcdA [Clostridium botulinum A
str. ATCC 19397]
gi|148287748|emb|CAL81814.1| cytochrome C biogenesis protein [Clostridium botulinum A str. ATCC
3502]
gi|152929026|gb|ABS34526.1| DsbD family protein [Clostridium botulinum A str. ATCC 19397]
Length = 227
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGAFG----SGKSRAQIIGDSIAFSLGLATTLALL 178
++F G++T +SPC L ++P+ + Y + K+RA I SIAF G LL
Sbjct: 5 LLFLEGIITFISPCILPMIPIYVSYFAGEDIDNKNYKNRALI--SSIAFVAGFTFVFTLL 62
Query: 179 GVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSS 238
GV A G + + + + + + +V GLN L II + L +F +A + SS
Sbjct: 63 GVAAGTVGVIFNKYMREINIVSGSIMVVFGLNYLGIINVGLLH--RSFKINKSAGHKKSS 120
Query: 239 VQAY-LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
+ + L G+ F +PC P L + L + S + +G ++L+ Y+ G P +L+A
Sbjct: 121 IMSTALFGMIFGFGWTPCVGPFLGSALMIASNSTNVFMGASMLMIYSLGLGIPFILSALL 180
Query: 298 AGALQSLLSF--RKFSSWINPMSGALLLGGGL 327
+L++ F R + + IN +SG LL+ G+
Sbjct: 181 IDSLKTTFDFIKRNYKT-INRISGGLLIAIGI 211
>gi|294139509|ref|YP_003555487.1| cytochrome c biogenesis protein [Shewanella violacea DSS12]
gi|293325978|dbj|BAJ00709.1| cytochrome c biogenesis protein, putative [Shewanella violacea
DSS12]
Length = 264
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 117 SFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLA 176
S ++A +F AGL+TSL+PC +LP+T+ +G+ SG R Q I S+ + GLA A
Sbjct: 53 SLWAIAAVFAAGLLTSLTPCVYPMLPITVSVVGSQASG--RTQSILYSLLYVFGLALVYA 110
Query: 177 LLGVGASFAGKAYGQIGTGLP---LAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAA 233
LG+ A+ +G +G + + P L +G ++M +L + L F ++A
Sbjct: 111 ALGILAASSGVLFGSVASH-PVTLLLVAGFCLLMAAWMLGWLRLPAGLMAPEFKSKSAPF 169
Query: 234 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
N + AG L +PC++PVL LL YVA + L L+ + G A L++
Sbjct: 170 N------VFFAGGLSGLVMAPCTSPVLGMLLMYVAGEGNRLWAALLMFVFAFGMSALLIV 223
Query: 294 AASFAGALQSLLSFRKFSSWIN 315
A SF+ AL +L + W+N
Sbjct: 224 AGSFSSALSAL---PRSGPWLN 242
>gi|8517641|emb|CAB94377.1| ShxV protein [Paracoccus denitrificans]
Length = 245
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 15/194 (7%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYI----------GAFGSGKSRAQIIGDSIAFSLGLATTLA 176
AGL++ LSPC L ++P L Y+ G + +R +++ ++AF+LG+ T
Sbjct: 12 AGLLSFLSPCILPMVPFYLSYMAGASVRELRDGGTVAAGARQRMVLRALAFALGVTTIFL 71
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
+LG+GA+ G+A+ Q L A+G+ ++ GL+ L ++ + L + R P
Sbjct: 72 MLGLGATALGQAFAQWKGTLSWVAAGVLVLFGLHFLGVLRIGL----LYREARVQTEAKP 127
Query: 237 SS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
S+ + AY+ GL F +PC P LA +L + + GG LL+ Y P +LAA
Sbjct: 128 STLIGAYVMGLAFGFGWTPCVGPALAAILMVASGMGELWRGGLLLVVYGLAMTLPFVLAA 187
Query: 296 SFAGALQSLLSFRK 309
FA S ++ +
Sbjct: 188 FFAAPFLSWVARHR 201
>gi|434388625|ref|YP_007099236.1| cytochrome c biogenesis protein [Chamaesiphon minutus PCC 6605]
gi|428019615|gb|AFY95709.1| cytochrome c biogenesis protein [Chamaesiphon minutus PCC 6605]
Length = 286
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 102/208 (49%), Gaps = 14/208 (6%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASF 184
F GL+ S+SPC L++LPL L YIG + SR + F LG L L G+ +SF
Sbjct: 83 FIGGLIASVSPCILALLPLNLSYIGT-RNITSRGDAFVKAGLFVLGNVIILGLFGLVSSF 141
Query: 185 AGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF-PSSVQAYL 243
AG + + + + ++MG LL +I++ LP N D +NF P V
Sbjct: 142 AGAVMVEYRGHINMVVGAIILIMGFGLLGLIKIPLPQI--NVD----GSNFGPFGV---- 191
Query: 244 AGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG-ALQ 302
GLTFAL +SPC++PVL +L S L+ + SY GY + LA+ G A Q
Sbjct: 192 -GLTFALVSSPCASPVLFAVLAAAGASGSQLLAVLTMASYAFGYTIIIFLASLLTGFAKQ 250
Query: 303 SLLSFRKFSSWINPMSGALLLGGGLYTF 330
+ L + + S +L+L G Y F
Sbjct: 251 ANLLLKHSQNITRFGSVSLILAGIYYLF 278
>gi|312793014|ref|YP_004025937.1| cytochrome c biogenesis protein transmembrane region
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|344996774|ref|YP_004799117.1| cytochrome c biogenesis transmembrane protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|312180154|gb|ADQ40324.1| cytochrome c biogenesis protein transmembrane region
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|343964993|gb|AEM74140.1| cytochrome c biogenesis protein transmembrane region
[Caldicellulosiruptor lactoaceticus 6A]
Length = 215
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 104/210 (49%), Gaps = 11/210 (5%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAG 186
AG ++ SPC L ++P+ + Y+ + G+ + +S+ F LG + +LG+ A+ G
Sbjct: 11 AGFLSFFSPCILPLIPVYVLYLFSQKGGRLK-----NSLLFVLGFSIVFVVLGMTAAAVG 65
Query: 187 KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDN-FDPRAAAANFPSSVQAYLAG 245
+ L A+ + ++MGL +L++ P F F P N + + G
Sbjct: 66 SVFSGYSFVLKKIAAIVIVLMGLVMLDLS----PDFLKRLFIPIHGKGNLDINASPLILG 121
Query: 246 LTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLL 305
+ +++ +PC PVL ++L A S+ L G LLL Y+ G+ P L+++ L++
Sbjct: 122 MVLSISWTPCVGPVLTSILSMAAISETFLKGAMLLLIYSMGFAVPFLISSFLIDRLKTFF 181
Query: 306 S-FRKFSSWINPMSGALLLGGGLYTFLDRL 334
++S I +GALL+ G+ F D++
Sbjct: 182 GMLNRYSRAIEYFTGALLIAFGILAFFDKI 211
>gi|334316313|ref|YP_004548932.1| cytochrome c biogenesis protein transmembrane region [Sinorhizobium
meliloti AK83]
gi|384529496|ref|YP_005713584.1| cytochrome c biogenesis protein transmembrane region [Sinorhizobium
meliloti BL225C]
gi|384536177|ref|YP_005720262.1| putative cytochrome C-type biogenesis protein [Sinorhizobium
meliloti SM11]
gi|6739565|gb|AAF27307.1|AF155772_1 cytochrome c-type biogenesis protein [Sinorhizobium meliloti]
gi|333811672|gb|AEG04341.1| cytochrome c biogenesis protein transmembrane region [Sinorhizobium
meliloti BL225C]
gi|334095307|gb|AEG53318.1| cytochrome c biogenesis protein transmembrane region [Sinorhizobium
meliloti AK83]
gi|336033069|gb|AEH79001.1| putative cytochrome C-type biogenesis protein [Sinorhizobium
meliloti SM11]
Length = 299
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIG-----------AFGSGKSRAQIIGDSIAFSLGLATTL 175
AG ++ LSPC L ++P L Y+ A + +R ++ ++ F+LG AT
Sbjct: 66 AGALSFLSPCVLPLVPPYLCYMAGVSVDQFRDGNAVATASTRRAVLPAALFFTLGFATVF 125
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LG GAS G Q L + I+MGL+ L + + L + F
Sbjct: 126 VALGAGASSIGLLLRQHLDLLSRIGGIIIIIMGLHFLGVFRIGLLAREARFQ-----GGK 180
Query: 236 PSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPLLL 293
P+++ AY+ GL FA +PC PVL T+LG VA ++D + G LL+ Y+ G P +
Sbjct: 181 PATLSGAYVMGLAFAFGWTPCIGPVLGTILG-VAAARDTVADGAALLAIYSLGLAVPFWI 239
Query: 294 AASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
AA F+ A LS FR+ I + GALL+ GL
Sbjct: 240 AAGFSSAFMRFLSRFRRHLGLIEKLMGALLVAAGL 274
>gi|150396637|ref|YP_001327104.1| cytochrome c biogenesis transmembrane protein [Sinorhizobium
medicae WSM419]
gi|150028152|gb|ABR60269.1| cytochrome c biogenesis protein transmembrane region [Sinorhizobium
medicae WSM419]
Length = 247
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 109/219 (49%), Gaps = 21/219 (9%)
Query: 127 AGLVTSLSPCTLSVLPLTLGY-----IGAFGSGK------SRAQIIGDSIAFSLGLATTL 175
AG ++ LSPC L ++P L Y + F SG+ +R ++ ++ F+LG AT
Sbjct: 14 AGALSFLSPCVLPLVPPYLCYMAGVSVEEFRSGEAVAAASTRRAVLPAALLFTLGFATVF 73
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LG GAS G Q L + IVMGL+ L + + L + F
Sbjct: 74 VALGAGASSIGLLLRQHLDLLSRIGGIIIIVMGLHFLGLFRIGLLAREARFQ-----GGK 128
Query: 236 PSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPLLL 293
P+++ AY+ GL FA +PC PVL T+LG VA ++D + G LL+ Y+ G P +
Sbjct: 129 PATLSGAYVMGLAFAFGWTPCIGPVLGTILG-VAAARDTVADGAALLAIYSLGLAVPFWI 187
Query: 294 AASFAGALQSLLS-FRKFSSWINPMSGALLLGGGLYTFL 331
AA F+GA LS FR+ I + G LL+ G + FL
Sbjct: 188 AAGFSGAFMRFLSRFRRHLGVIEKLMGGLLVATG-FAFL 225
>gi|144899377|emb|CAM76241.1| Cytochrome c biogenesis protein, transmembrane region
[Magnetospirillum gryphiswaldense MSR-1]
Length = 241
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 107/215 (49%), Gaps = 10/215 (4%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFG----SGKSRAQIIGDSIAFSLGLATT 174
S A FGAG ++ LSPC L ++P L ++G G + + + ++ +IAF LG +T
Sbjct: 6 VSFAGAFGAGALSFLSPCVLPLIPAYLCFLGGVGLDQLTERRQRGVLAAAIAFVLGFSTV 65
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
+G AS + L +AA + IV GL+ + ++ + F NF+ R
Sbjct: 66 FIAMGASASALNRVIMDNMRWLSVAAGLVIIVFGLHYMGVLRIA----FLNFEKRLHVQQ 121
Query: 235 FPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
P+ V A++ GL FA +PC P+LAT+L A G LL +Y G P LL
Sbjct: 122 RPAGLVGAFVLGLAFAFGWTPCVGPILATILMLAAGGDSVWYGTALLGAYAAGLGLPFLL 181
Query: 294 AASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
AA+ A S L+ FR+ + + GALL+ GL
Sbjct: 182 AAAAARPFMSFLTRFRRHMRVVELIIGALLIVTGL 216
>gi|424910584|ref|ZP_18333961.1| cytochrome c biogenesis protein [Rhizobium leguminosarum bv. viciae
USDA 2370]
gi|392846615|gb|EJA99137.1| cytochrome c biogenesis protein [Rhizobium leguminosarum bv. viciae
USDA 2370]
Length = 248
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 101/197 (51%), Gaps = 19/197 (9%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ-----------IIGDSIAFSLGLATTL 175
AG ++ LSPC L ++P L Y+ + R + ++ ++ F+LG AT
Sbjct: 14 AGALSFLSPCVLPLVPPYLCYMAGVSVEQFRTEDAAPRPEIRRAVLFSAVFFTLGFATVF 73
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LG GAS G Q L + I+MGLN L + + L S + R A
Sbjct: 74 VALGAGASTIGTLLRQNLDILAKIGGFIIILMGLNFLGVFRIGLFSR----EARFQGAGK 129
Query: 236 PSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPLLL 293
P+++ AY+ GL FA +PC PVL +LG VA S+D + G +LL+ Y+ G P +
Sbjct: 130 PATLSGAYIMGLAFAFGWTPCIGPVLGAILG-VAASRDTVGDGAMLLAVYSLGLAVPFWI 188
Query: 294 AASFAGA-LQSLLSFRK 309
AA+F+G+ ++ L+ FR+
Sbjct: 189 AAAFSGSFMRFLVRFRR 205
>gi|335036400|ref|ZP_08529727.1| cytochrome c-type biogenesis protein [Agrobacterium sp. ATCC 31749]
gi|333792291|gb|EGL63661.1| cytochrome c-type biogenesis protein [Agrobacterium sp. ATCC 31749]
Length = 248
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 100/197 (50%), Gaps = 19/197 (9%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ-----------IIGDSIAFSLGLATTL 175
AG ++ LSPC L ++P L Y+ + R + ++ + F+LG AT
Sbjct: 14 AGALSFLSPCVLPLVPPYLCYMAGVSVEQFRTEETAPRPEVRRAVLFSAFCFTLGFATVF 73
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LG GAS G Q L + I+MGLN L + + L S + R A
Sbjct: 74 VALGAGASTIGTLLRQNLDILAKIGGFIIILMGLNFLGVFRIGLFSR----EARFQGAGK 129
Query: 236 PSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPLLL 293
P+++ AY+ GL FA +PC PVL +LG VA S+D + G +LL+ Y+ G P +
Sbjct: 130 PATLSGAYVMGLAFAFGWTPCIGPVLGAILG-VAASRDTVGDGAMLLAVYSLGLAVPFWI 188
Query: 294 AASFAGA-LQSLLSFRK 309
AA+F+G+ ++ L+ FR+
Sbjct: 189 AAAFSGSFMRFLVRFRR 205
>gi|67925394|ref|ZP_00518743.1| Cytochrome c biogenesis protein, transmembrane region [Crocosphaera
watsonii WH 8501]
gi|67852768|gb|EAM48178.1| Cytochrome c biogenesis protein, transmembrane region [Crocosphaera
watsonii WH 8501]
Length = 235
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 102/206 (49%), Gaps = 24/206 (11%)
Query: 132 SLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAG----- 186
S+SPC L++LP+ L YIG KSR + F LG T L+L G+ +SFAG
Sbjct: 39 SISPCILALLPVNLSYIGTLNI-KSRWDAFSKAGLFVLGAVTILSLFGLVSSFAGLVMVE 97
Query: 187 -KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAG 245
+ Y I GL +A VMGL L+ ++++ LP N A Y G
Sbjct: 98 YRGYINIVVGLIMA------VMGLWLIGVVKIPLPQM--NVSLPVAGP--------YGVG 141
Query: 246 LTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG-ALQSL 304
LTFAL +SPC++PVL +L A S ++G ++SY GY + LA+ F G A QS
Sbjct: 142 LTFALVSSPCASPVLFAVLAAAAASGSQILGTLTMVSYALGYTMLIFLASLFTGLAKQSK 201
Query: 305 LSFRKFSSWINPMSGALLLGGGLYTF 330
+ I S AL++ G Y F
Sbjct: 202 KLLSHSETIIRTGSVALIMTGAYYLF 227
>gi|424828206|ref|ZP_18252947.1| putative cytochrome c-type biogenesis protein CcdA [Clostridium
sporogenes PA 3679]
gi|365979689|gb|EHN15742.1| putative cytochrome c-type biogenesis protein CcdA [Clostridium
sporogenes PA 3679]
Length = 227
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 16/210 (7%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSG-------KSRAQIIGDSIAFSLGLATTL 175
++F G++T +SPC L ++P+ Y+ F G K+RA I SIAF G
Sbjct: 5 LLFLEGIITFISPCILPMIPI---YVSYFAGGDIDNKNYKNRALI--SSIAFVAGFTLVF 59
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LLGV A G + + + + + I+ GLN L II ++L +F +
Sbjct: 60 TLLGVAAGTVGVIFNTYMREINIVSGSIMIIFGLNYLGIINVEL--LHRSFKINKPTGHK 117
Query: 236 PSSVQAY-LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
SS+ + L G+ F +PC P L + L + S + +G ++L+ Y+ G P +L+
Sbjct: 118 KSSIMSTALFGMIFGFGWTPCVGPFLGSALMIASNSTNVFMGASMLMIYSLGLGIPFILS 177
Query: 295 ASFAGALQSLLSF-RKFSSWINPMSGALLL 323
A +L++ F ++ IN +SG LL+
Sbjct: 178 ALLIDSLKNTFEFIKRNYKIINRISGVLLI 207
>gi|226228985|ref|YP_002763091.1| thiol--disulfide interchange protein [Gemmatimonas aurantiaca T-27]
gi|226092176|dbj|BAH40621.1| thiol--disulfide interchange protein [Gemmatimonas aurantiaca T-27]
Length = 241
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 109/206 (52%), Gaps = 13/206 (6%)
Query: 109 VLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGK-------SRAQII 161
V QLS L ++FGAG++TSL+PC ++P+T +G S + SR + +
Sbjct: 5 VAAQLSGNPAAVLPLLFGAGVLTSLTPCVYPMIPITAAIVGGQSSSELSGATKASRWRPL 64
Query: 162 GDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLA---ASGLAIVMGLNLLEIIELQ 218
G S+A+ +GLA A LG+ A G +G I + P A + L ++ L++L++I ++
Sbjct: 65 GLSLAYVMGLALVYAGLGLIAGLTGTMFGTISSN-PWAFFVMANLLLIAALSMLDVIPVR 123
Query: 219 LPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGT 278
+P+ A A + A++ G L A+PCS PV+A +L +VAT+K +G T
Sbjct: 124 VPA--AIMQRAANAGTGGRAAGAFVMGAASGLVAAPCSAPVMAAVLTWVATTKSAALGFT 181
Query: 279 LLLSYTTGYVAPLLLAASFAGALQSL 304
L +++ G L++ AG L L
Sbjct: 182 YLFTFSLGMCTLLVIVGLSAGTLSRL 207
>gi|395786173|ref|ZP_10465900.1| hypothetical protein ME5_01218 [Bartonella tamiae Th239]
gi|423716934|ref|ZP_17691124.1| hypothetical protein MEG_00664 [Bartonella tamiae Th307]
gi|395422471|gb|EJF88667.1| hypothetical protein ME5_01218 [Bartonella tamiae Th239]
gi|395429008|gb|EJF95083.1| hypothetical protein MEG_00664 [Bartonella tamiae Th307]
Length = 265
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 91/194 (46%), Gaps = 14/194 (7%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGA-----FGSGK------SRAQIIGDSIAFSLGLA 172
+F AG ++ LSPC L ++P L Y+ F G R + ++AF+LG
Sbjct: 12 VFFAGALSFLSPCVLPLVPPYLCYMAGVSVEDFRGGNIEKKAPVRFTLFIAALAFALGFT 71
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
T LG AS G+ G L +AA + I+ GLN L + +L S F R+
Sbjct: 72 TVFVALGASASTIGRFIGYYRDWLAMAAGFIIIIFGLNFLGVFKLGFLSREARFQTRSTP 131
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
A + AY+ GL FA +PC P+L ++ T + G LL Y+ G P +
Sbjct: 132 AG---PIGAYIIGLAFAFGWTPCIGPILGPIITLAGTKESVGEGAFLLAVYSMGLAIPFI 188
Query: 293 LAASFAGALQSLLS 306
LAA F+G+ + L+
Sbjct: 189 LAALFSGSFMAFLN 202
>gi|394990334|ref|ZP_10383166.1| hypothetical protein SCD_02760 [Sulfuricella denitrificans skB26]
gi|393790599|dbj|GAB72805.1| hypothetical protein SCD_02760 [Sulfuricella denitrificans skB26]
Length = 740
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGV 180
+A FG GL+ +L+PC ++P+ G I G ++++ +G S+A+ LG+A T A +GV
Sbjct: 328 MASFFGFGLLLALTPCVFPMIPILSGIIVGQGHALTKSRALGLSVAYVLGMALTYAAVGV 387
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIV---MGLNLLEIIELQLPSFFDN-FDPRAAAANFP 236
A +G + P G A++ + ++ ELQ+PSF N F+ +
Sbjct: 388 AAGMSGTLFSSALQN-PWVLGGFAMIFVALAFSMFGFYELQMPSFIQNRFNDASNRVKGG 446
Query: 237 SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
S+ ++ G A+ PC LA L Y+ + D ++GG+ L G APLLL
Sbjct: 447 STAGVFVMGALSAVIVGPCVAAPLAGALLYIGQTGDVVLGGSALFFLALGMGAPLLLVGV 506
Query: 297 FAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
AGAL K +W+ + G LLLG ++
Sbjct: 507 SAGAL-----LPKAGAWMEAVKSFFGVLLLGMAIW 536
>gi|116750310|ref|YP_846997.1| cytochrome c biogenesis protein transmembrane subunit
[Syntrophobacter fumaroxidans MPOB]
gi|116699374|gb|ABK18562.1| cytochrome c biogenesis protein, transmembrane region
[Syntrophobacter fumaroxidans MPOB]
Length = 449
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 10/206 (4%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIG--AFGSGKSRAQIIGDSIAFSLGLATTLALLGVG 181
IF G+ +L+PC ++P+T+ Y G A G+G + ++ + + GLA T +LLGV
Sbjct: 58 IFAGGMALNLTPCVYPLIPITVSYFGGRATGAGTAPGSVVAHGLCYVAGLAVTNSLLGVV 117
Query: 182 ASFAGKAYGQIGTGLPLAASGLAIVM---GLNLLEIIELQLPSFFDNFDPRAAAANFPSS 238
A+ G G + PL S +A+++ +L EL+LP+ +AAA +P
Sbjct: 118 AALTGGLMGGLLQN-PLVLSAVAVILVVFATSLFGFWELRLPAGLT----QAAAKPYPGY 172
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFA 298
+ GLT + +PC P + L+ +VA PL G + + + G PL + A F+
Sbjct: 173 FGSVFMGLTLGIVTAPCIGPFVLGLITWVAGIGSPLFGFLVFFTLSLGLGCPLFVLAVFS 232
Query: 299 GALQSLLSFRKFSSWINPMSGALLLG 324
G L L + W+ + G +L+G
Sbjct: 233 GYLDRLPRSGGWMVWVRKLMGWVLIG 258
>gi|386714436|ref|YP_006180759.1| cytochrome c-type biogenesis protein CcdA [Halobacillus halophilus
DSM 2266]
gi|384073992|emb|CCG45485.1| cytochrome c-type biogenesis protein CcdA [Halobacillus halophilus
DSM 2266]
Length = 234
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 113/231 (48%), Gaps = 25/231 (10%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-----------S 164
+S ++ + FGAG ++ +SPC L + P L YI +G S +++ D +
Sbjct: 1 MSEINIFIAFGAGFLSFISPCVLPLYPAFLSYI----TGMSVSELKDDNAMLRRKSLLHT 56
Query: 165 IAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFD 224
I+F +G T +LG SF + Q T + + L I G ++ + Q F
Sbjct: 57 ISFLIGFTTIFLVLGFSGSFLSQFLIQNDTIIRRLGAILIIFFGFVIIGVFNFQ----FL 112
Query: 225 NFDPRAAAANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSY 283
D + A N P+ + ++L GLTF+L +PC+ P+L+ +L V + P + ++L+Y
Sbjct: 113 MKDRKIAFKNRPAGFIGSFLIGLTFSLGWTPCTGPILSAVL--VLAADSPELFMVMMLAY 170
Query: 284 TTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
+ G+ P L+ + F G L + RK S I + G +++ G+ + D +
Sbjct: 171 SLGFSVPFLVLSFFVGKLNWV---RKHSGTIVKIGGYIMIMMGIALYFDWM 218
>gi|444309995|ref|ZP_21145623.1| cytochrome c-type biogenesis protein CcdA [Ochrobactrum intermedium
M86]
gi|443486642|gb|ELT49416.1| cytochrome c-type biogenesis protein CcdA [Ochrobactrum intermedium
M86]
Length = 258
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 97/217 (44%), Gaps = 18/217 (8%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ--------------IIGDSIAFSLGL 171
GAG ++ LSPC L ++P L Y+ RA+ + +I F LG
Sbjct: 12 GAGALSFLSPCVLPLVPPYLCYMAGVSVEDFRAEKATTVAAAPSARRSLAFAAICFVLGF 71
Query: 172 ATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAA 231
T LG GAS G + + A + I+MGLN L ++ L S F R A
Sbjct: 72 TTVFVALGAGASSIGAFLRAWQQEIAIVAGVVIILMGLNFLGVLRLSFLSREARFQARNA 131
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
A S + AY+ GL FA +PC PVL +L S G LL +Y+ G P
Sbjct: 132 PA---SPLGAYVMGLAFAFGWTPCIGPVLGPILTLAGGSSTVGEGALLLATYSLGLGIPF 188
Query: 292 LLAASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
L+AA F+GA LS FR + GALL+ G+
Sbjct: 189 LIAALFSGAFMRFLSRFRVHLGKVEKAMGALLVVAGV 225
>gi|407472618|ref|YP_006787018.1| cytochrome c biogenesis protein, transmembrane region, dsbD family
[Clostridium acidurici 9a]
gi|407049126|gb|AFS77171.1| cytochrome c biogenesis protein, transmembrane region, dsbD family
[Clostridium acidurici 9a]
Length = 231
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 104/224 (46%), Gaps = 14/224 (6%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYI----GAFGSGKSRAQIIGDSIAFSLGLATT 174
SL + FGAG ++ LSPC L ++P + YI + + + +I F +G
Sbjct: 6 VSLFIAFGAGFLSFLSPCILPLIPAYIMYITGCSNEYDIKNKKLFTLIRTIGFVIGFTLI 65
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASGLAI-VMGLNLLEIIELQLPSFFDNFDPRAAA- 232
++G ASF GK + + + SG+ I V GL L+ I + F N + R +A
Sbjct: 66 FMVMGSSASFLGKIFIR-NKDIFSKLSGIIISVFGLYLMGFINFK----FLNIEKRISAP 120
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
N + + L G+ FA +PC PVL ++L Y +S G LLL Y+ G P +
Sbjct: 121 KNMNNWFSSILMGMAFAAGWTPCFGPVLGSILFYAGSSATVSKGTLLLLVYSVGMAVPFI 180
Query: 293 LAASFAGALQSLLSFR--KFSSWINPMSGALLLGGGLYTFLDRL 334
L A F L R F +I +SG ++ G+ F +++
Sbjct: 181 LTALFTDIFNKFL-IRAGWFLKYIPKISGLVMFIFGILVFFNKV 223
>gi|417859782|ref|ZP_12504838.1| cytochrome c-type biogenesis protein [Agrobacterium tumefaciens F2]
gi|338822846|gb|EGP56814.1| cytochrome c-type biogenesis protein [Agrobacterium tumefaciens F2]
Length = 248
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----------SGKSRAQIIGDSIAFSLGLATTL 175
AG ++ LSPC L ++P L Y+ + R ++ + F+LG AT
Sbjct: 14 AGALSFLSPCVLPLVPPYLCYMAGVSVEQFKTEDVAPRPEVRKAVLFSAFFFTLGFATVF 73
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LG GAS G Q L + I+MGLN L + + + S + R A
Sbjct: 74 VALGAGASTIGTLLRQNLDILAKIGGFIIILMGLNFLGVFRIGMFSR----EARFQGAGK 129
Query: 236 PSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPLLL 293
P+++ AY+ GL FA +PC PVL +LG +A S+D + G +LL+ Y+ G P +
Sbjct: 130 PATLSGAYVMGLAFAFGWTPCIGPVLGAILG-IAASRDTVGDGAMLLAVYSLGLAVPFWI 188
Query: 294 AASFAGA-LQSLLSFRKFSSWINPMSGALLL 323
AA F+G+ ++ L+ FR+ + + G LL+
Sbjct: 189 AAGFSGSFMRFLVRFRRHLGLVEKLMGVLLV 219
>gi|239833946|ref|ZP_04682274.1| cytochrome c biogenesis protein transmembrane region [Ochrobactrum
intermedium LMG 3301]
gi|239822009|gb|EEQ93578.1| cytochrome c biogenesis protein transmembrane region [Ochrobactrum
intermedium LMG 3301]
Length = 262
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 97/217 (44%), Gaps = 18/217 (8%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ--------------IIGDSIAFSLGL 171
GAG ++ LSPC L ++P L Y+ RA+ + +I F LG
Sbjct: 16 GAGALSFLSPCVLPLVPPYLCYMAGVSVEDFRAEKATTVAAAPSARRSLAFAAICFVLGF 75
Query: 172 ATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAA 231
T LG GAS G + + A + I+MGLN L ++ L S F R A
Sbjct: 76 TTVFVALGAGASSIGAFLRAWQQEIAIVAGVVIILMGLNFLGVLRLSFLSREARFQARNA 135
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
A S + AY+ GL FA +PC PVL +L S G LL +Y+ G P
Sbjct: 136 PA---SPLGAYVMGLAFAFGWTPCIGPVLGPILTLAGGSSTVGEGALLLATYSLGLGIPF 192
Query: 292 LLAASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
L+AA F+GA LS FR + GALL+ G+
Sbjct: 193 LIAALFSGAFMRFLSRFRVHLGKVEKAMGALLVVAGV 229
>gi|399992436|ref|YP_006572676.1| ccdA-like protein SoxV [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
gi|398656991|gb|AFO90957.1| ccdA-like protein SoxV [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
Length = 245
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD------------SIAFSLGLA 172
F AGL++ +PC L ++P L Y+G + R + GD SI F+ G+
Sbjct: 10 FVAGLLSFFTPCVLPMVPFYLSYMGGLSMAELRNE--GDIAPGAQRRLVLASICFAAGVT 67
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
T L+G+GA+ G+ +GQ L A+ L +V GL+ L ++ + L + A+
Sbjct: 68 TVFVLMGMGATALGQLFGQYLDILAYGAAALLLVFGLHFLGVVRIPLLYREARVESSASP 127
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
A F AY+ GL F +PC P LA++L + D GG LLL Y AP +
Sbjct: 128 ATFAG---AYMMGLAFGFGWTPCVGPALASILMIASGMGDIWRGGLLLLVYGAAMTAPFV 184
Query: 293 LAASFAGALQSLLSF----RKFSSWINPMSGALLL 323
+AA FA + L F R +W+ G +L+
Sbjct: 185 IAALFA---RPFLGFVARHRAAFAWVEKGMGVMLI 216
>gi|323702439|ref|ZP_08114103.1| cytochrome c biogenesis protein transmembrane region
[Desulfotomaculum nigrificans DSM 574]
gi|323532578|gb|EGB22453.1| cytochrome c biogenesis protein transmembrane region
[Desulfotomaculum nigrificans DSM 574]
Length = 233
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 113/227 (49%), Gaps = 20/227 (8%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGY-----IGAFGSGKSRAQIIGDSIAFSLGLATTL 175
L + F AG+V+ LSPC L ++P + Y I A G+ +R ++ ++ F+LG
Sbjct: 6 LYIAFSAGIVSFLSPCILPLVPGYISYLAGVSITAQGAAVNRGLVVRRAVLFNLGFMLVF 65
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAI-VMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
L+G S+ GK + T L GL I +MGL + +++L+ F R N
Sbjct: 66 ILMGATGSYIGKLFLTYKTVF-LKVGGLFIFIMGLQMTGLLKLK-------FLYRTYKIN 117
Query: 235 FPSSVQ----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAP 290
S A L G+TFA +PC PVLA++L Y S G LL +Y+ G P
Sbjct: 118 HNLSTNGPLGALLLGVTFAAGWTPCVGPVLASILMYAGMSGTVTKGVILLGAYSLGLAVP 177
Query: 291 LLLAA-SFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFP 336
+LAA S + + L F K+ + I+ +SG +L+ G FL+ +FP
Sbjct: 178 FMLAAVSISWTVNYLPRFNKYLAMISVISGIILMIVGAALFLN-IFP 223
>gi|302392699|ref|YP_003828519.1| cytochrome c biogenesis protein transmembrane region [Acetohalobium
arabaticum DSM 5501]
gi|302204776|gb|ADL13454.1| cytochrome c biogenesis protein transmembrane region [Acetohalobium
arabaticum DSM 5501]
Length = 226
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 107/217 (49%), Gaps = 4/217 (1%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
S+ V AG+ + +SPC L ++P + YI + K R + +I F +G + L+
Sbjct: 4 VSIIVALLAGITSFVSPCVLPLVPAYVSYITGSAAQKGRLFTLVRAIGFVIGFSIIFILM 63
Query: 179 GVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSS 238
G AS+ G+ + + + + L IV GL ++ I++ L F A N+ SS
Sbjct: 64 GASASYLGQLFARYQSIFTKISGILIIVFGLQMVGILKFDLLYKEVRFKGPQQATNWFSS 123
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFA 298
+ L G+ FA +PC VLA++L Y +S + G LL Y+ G P +L A F
Sbjct: 124 I---LMGMAFAAGWTPCVGTVLASILLYAGSSTTVVTGVLLLTVYSLGLGIPFILTAVFI 180
Query: 299 GALQSLLS-FRKFSSWINPMSGALLLGGGLYTFLDRL 334
SL + K+ I+ +SG +++ G+ +L+++
Sbjct: 181 NKFTSLSNKINKYLPLISKVSGVVMIIFGILLYLNQI 217
>gi|149202499|ref|ZP_01879471.1| putative cytochrome c-type biogenesis protein CcdA [Roseovarius sp.
TM1035]
gi|149143781|gb|EDM31815.1| putative cytochrome c-type biogenesis protein CcdA [Roseovarius sp.
TM1035]
Length = 264
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFG------SGKSRAQIIGDSIAFSLGLAT 173
++ V AG+++ LSPC L ++P L Y+ SG+SRA+ + ++ F LGL+T
Sbjct: 28 AMFVALAAGIISFLSPCVLPIVPPYLAYMSGVSLNDLSESGQSRARAVVPALFFVLGLST 87
Query: 174 TLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAA 233
LG AS G + Q + A L ++ G + + + ++ F D A
Sbjct: 88 VFIFLGFTASAIGTVFLQYQSYFNTVAGILVMIFGAHFVGVYRIK---FLDREARLDAGD 144
Query: 234 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPLL 292
SS AY+ GL FA +PC P L +L +A S+ + GT+LL+ Y G P L
Sbjct: 145 RGGSSFGAYILGLAFAFGWTPCIGPQLGAILS-LAASEGSVARGTMLLAIYAIGLGVPFL 203
Query: 293 LAASFAGALQSLLSFRK 309
L A+F LQ L+ + K
Sbjct: 204 LVAAFLPRLQGLMGWMK 220
>gi|422875482|ref|ZP_16921967.1| membrane protein [Clostridium perfringens F262]
gi|380303540|gb|EIA15842.1| membrane protein [Clostridium perfringens F262]
Length = 230
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 113/216 (52%), Gaps = 8/216 (3%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLAL 177
F ++ + F AG+V S SPCTLS +PL +GY+ K + S+ FS+GL T +
Sbjct: 16 FLAIILSFFAGVVASFSPCTLSSIPLLIGYVQG-SEVKDNKKAFKCSLIFSIGLGITFTV 74
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
+G+ + GKA+ G + + + I GL +L++I L F D +
Sbjct: 75 IGLLTALIGKAFLGAGKFWYIILAFIMIGSGLQVLDVINL----FGDKKEACKITKRREG 130
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
+ + G+ + ASPC+TP++A ++ ++A S + +IG +LL Y+ G+ ++LA +F
Sbjct: 131 ILDVFFLGILSGILASPCATPIMAAIIAFIAASGNLVIGMIMLLMYSLGHSVLIILAGTF 190
Query: 298 AGALQSLL---SFRKFSSWINPMSGALLLGGGLYTF 330
G ++ + + +K + + G +++ GLY F
Sbjct: 191 FGLVEKIAYSENGKKIGRVLKNILGTIIILVGLYLF 226
>gi|407779782|ref|ZP_11127034.1| cytochrome c-type biogenesis protein CcdA [Nitratireductor
pacificus pht-3B]
gi|407298401|gb|EKF17541.1| cytochrome c-type biogenesis protein CcdA [Nitratireductor
pacificus pht-3B]
Length = 252
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAF----------------GSGKSRAQIIGDSIAFSL 169
GAG ++ LSPC L ++P L Y+ G +R + S AF L
Sbjct: 12 GAGALSFLSPCVLPLVPPYLCYMAGVSVEEFQGQKQAEQASSGLNGTRLALFSASFAFVL 71
Query: 170 GLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR 229
G T LLG GAS G L + A + I+MGLN L I L++P F + + R
Sbjct: 72 GFTTVFVLLGAGASSIGAVLRAWQNELAIVAGVVIILMGLNFLGI--LRIP--FLSREAR 127
Query: 230 AAAANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYV 288
A P++ + AY+ GL FA +PC PVL +L + G LL Y+ G
Sbjct: 128 FQAGGKPATKLGAYVMGLAFAFGWTPCIGPVLGPILTLAGGRETVTDGAILLAVYSLGLG 187
Query: 289 APLLLAASFAGALQSLLS-FRKFSSWINPMSGALLL 323
P L+AA F+G+ LS FR + + G LL+
Sbjct: 188 IPFLIAALFSGSFMRFLSRFRMHLGRVEKVMGGLLV 223
>gi|15965428|ref|NP_385781.1| cytochrome C-type biogenesis protein [Sinorhizobium meliloti 1021]
gi|407720636|ref|YP_006840298.1| cytochrome c biogenesis protein transmembrane region [Sinorhizobium
meliloti Rm41]
gi|418403329|ref|ZP_12976821.1| cytochrome c-type biogenesis protein [Sinorhizobium meliloti
CCNWSX0020]
gi|433613459|ref|YP_007190257.1| Cytochrome c biogenesis protein [Sinorhizobium meliloti GR4]
gi|15074609|emb|CAC46254.1| Putative cytochrome C-type biogenesis protein [Sinorhizobium
meliloti 1021]
gi|359502706|gb|EHK75276.1| cytochrome c-type biogenesis protein [Sinorhizobium meliloti
CCNWSX0020]
gi|407318868|emb|CCM67472.1| cytochrome c biogenesis protein transmembrane region [Sinorhizobium
meliloti Rm41]
gi|429551649|gb|AGA06658.1| Cytochrome c biogenesis protein [Sinorhizobium meliloti GR4]
Length = 247
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIG-----------AFGSGKSRAQIIGDSIAFSLGLATTL 175
AG ++ LSPC L ++P L Y+ A + +R ++ ++ F+LG AT
Sbjct: 14 AGALSFLSPCVLPLVPPYLCYMAGVSVDQFRDGNAVATASTRRAVLPAALFFTLGFATVF 73
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LG GAS G Q L + I+MGL+ L + + L + F
Sbjct: 74 VALGAGASSIGLLLRQHLDLLSRIGGIIIIIMGLHFLGVFRIGLLAREARFQ-----GGK 128
Query: 236 PSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPLLL 293
P+++ AY+ GL FA +PC PVL T+LG VA ++D + G LL+ Y+ G P +
Sbjct: 129 PATLSGAYVMGLAFAFGWTPCIGPVLGTILG-VAAARDTVADGAALLAIYSLGLAVPFWI 187
Query: 294 AASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
AA F+ A LS FR+ I + GALL+ GL
Sbjct: 188 AAGFSSAFMRFLSRFRRHLGLIEKLMGALLVAAGL 222
>gi|317496249|ref|ZP_07954609.1| cytochrome C biogenesis protein transmembrane protein [Gemella
morbillorum M424]
gi|316913824|gb|EFV35310.1| cytochrome C biogenesis protein transmembrane protein [Gemella
morbillorum M424]
Length = 259
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 17/207 (8%)
Query: 114 SALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGK----------SRAQIIGD 163
+++S L+ +F GL++ LSPC + +LP+ YIG K ++ I +
Sbjct: 23 TSVSLVKLSFLFLEGLLSFLSPCVIPILPI---YIGILAGKKEQNEHGELVFNKRNTITN 79
Query: 164 SIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL-QLPSF 222
++ F LG+ +T +L SF + L + + L + MGL L + ++ L
Sbjct: 80 TLFFVLGICSTFFILAFATSFISIFLNENIKTLQIVSGILIVFMGLLQLGVFKIGFLKQE 139
Query: 223 FDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS 282
F D N + V A+L G TF+ + +PC P+LA++ Y A+S ++ L+L
Sbjct: 140 FSIKDKVKRKGNKTTPVLAFLMGFTFSFSWTPCIGPILASVFLY-ASSHTGIMSIILVLV 198
Query: 283 YTTGYVAPLLLAASFAGALQSLLSFRK 309
Y G++ P + A FA L + F+K
Sbjct: 199 YCLGFILPFIFVAFFASTLLRI--FKK 223
>gi|83590664|ref|YP_430673.1| cytochrome c biogenesis protein, transmembrane region [Moorella
thermoacetica ATCC 39073]
gi|83573578|gb|ABC20130.1| Cytochrome c biogenesis protein, transmembrane region [Moorella
thermoacetica ATCC 39073]
Length = 227
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 116/229 (50%), Gaps = 22/229 (9%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIG--AFGSGK----SRAQIIGDSIAFSLGLA 172
SL + FGAGL++ SPC + +LP Y+G A SG+ R+ + G + F+ G A
Sbjct: 4 VSLVIAFGAGLLSFFSPCIIPLLPAYFTYLGGSAVASGQVQDLGRSFLAGRAALFTAGFA 63
Query: 173 TTLALLGV---GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR 229
LLG G + +AY + L L I+ G+ + I + + ++ R
Sbjct: 64 LIFILLGASAGGLGYVLQAYRPVLNRL---GGILIIIFGMQVAGIGRIPFLAREKKWELR 120
Query: 230 AAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYV 288
P + ++L G+ FA +PC PVL ++L Y A S+ L+ G LLL+ Y+ G
Sbjct: 121 PRT---PGAAASFLLGMAFAAGWTPCIGPVLGSILIY-AGSQATLLRGMLLLAVYSLGLA 176
Query: 289 APLLLAASFAGALQSLLSFRKFSSW---INPMSGALLLGGGLYTFLDRL 334
P LLAA F G + L S RKFS + I+ +SG +L+ G+ FL RL
Sbjct: 177 VPFLLAALFLGPV--LYSLRKFSRYLPQISLISGIILVVMGVLVFLGRL 223
>gi|11095328|gb|AAG29835.1|AF308446_2 cytochrome c biogenesis protein CcdA [Paracoccus pantotrophus]
Length = 247
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 100/217 (46%), Gaps = 12/217 (5%)
Query: 127 AGLVTSLSPCTLSVLPLTLGY-----IGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVG 181
AG+++ LSPC L V+P L Y +G SG+ A + ++ F LGL+T L+G+
Sbjct: 21 AGILSFLSPCVLPVVPPYLAYMTGVGVGGLKSGERSAVV--PALFFVLGLSTVFLLMGMA 78
Query: 182 ASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQA 241
AS G+ + Q L A I+MGL+ L II + F D A SS+ A
Sbjct: 79 ASAFGRMFLQWQDWLARGAGVAVIIMGLHFLRIIRI---PFLDTEARLDAGDKGGSSLGA 135
Query: 242 YLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG-A 300
Y+ GL FA +PC P L +L T + G LL Y G P LL+A F A
Sbjct: 136 YILGLAFAFGWTPCIGPQLGMILSLAVTGAEAGRGAALLAVYALGLGIPFLLSAIFINRA 195
Query: 301 LQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFPT 337
+ + + I M G LL+ G L FPT
Sbjct: 196 IGVMNRIKPHLKLIERMMGGLLVAVG-AALLTGAFPT 231
>gi|329768120|ref|ZP_08259629.1| hypothetical protein HMPREF0428_01326 [Gemella haemolysans M341]
gi|328838275|gb|EGF87887.1| hypothetical protein HMPREF0428_01326 [Gemella haemolysans M341]
Length = 242
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 17/207 (8%)
Query: 114 SALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGK----------SRAQIIGD 163
+A S + ++F GL++ LSPC + +LP+ YIG K ++ I +
Sbjct: 6 TASSVLKMGLVFLEGLLSFLSPCVIPILPI---YIGILAGKKEMNEHGELVFNKRNTITN 62
Query: 164 SIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL-QLPSF 222
+++F LG+ +T +L SF + L + + L I MGL L + ++ L
Sbjct: 63 TLSFVLGICSTFFILAFATSFISIFLNENIKTLQIVSGVLIIFMGLLQLGVFKIGFLKQE 122
Query: 223 FDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS 282
F + N + + A+L G TF+ + +PC P+LA++ Y A+S ++ L+L+
Sbjct: 123 FSIKNKVKRKGNKTTPILAFLMGFTFSFSWTPCIGPILASVFLY-ASSHTGIMSVLLILA 181
Query: 283 YTTGYVAPLLLAASFAGALQSLLSFRK 309
Y G++ P +L A FA L L F+K
Sbjct: 182 YCLGFILPFILVAFFASKLLEL--FKK 206
>gi|375090388|ref|ZP_09736703.1| hypothetical protein HMPREF9708_01093 [Facklamia languida CCUG
37842]
gi|374565601|gb|EHR36867.1| hypothetical protein HMPREF9708_01093 [Facklamia languida CCUG
37842]
Length = 238
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 108/215 (50%), Gaps = 27/215 (12%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIG---------AFGSGKSRAQIIGDSIAFSLGLATT 174
+F AG ++ +PCT ++P+ +G + FG + + ++AF LGL+T+
Sbjct: 11 VFIAGFLSFFAPCTFPLIPVYIGLLTDKAGEYKKIKFGRYELNKGAMIKTMAFVLGLSTS 70
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASG-LAIVMGLNLLEIIEL----QLPSF-FDNFDP 228
A+LG GA G I L A+G L ++G++ +++I L ++ F F++ P
Sbjct: 71 FAILGFGAGVIGSV---INNRWVLTAAGFLVFLLGIHQMDLIHLDQINKIKGFQFNHHKP 127
Query: 229 RAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYV 288
RA A YL G++F+L +PC P+LA +L A+S G L+L Y+ G +
Sbjct: 128 RALGA--------YLMGVSFSLGWTPCVGPILAAVLITSASSGQQFYGAFLMLIYSIGLM 179
Query: 289 APLLLAASFAGALQSLLS-FRKFSSWINPMSGALL 322
P L+ A + AL + F+K I + G L+
Sbjct: 180 IPFLIMAIASSALMNHFKLFKKHLVTIKRIGGFLV 214
>gi|206890683|ref|YP_002249022.1| C-type cytochrome biogenesis protein [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206742621|gb|ACI21678.1| C-type cytochrome biogenesis protein [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 225
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGS--------GKSRAQIIGDSIAFSLGLATTLA 176
F G+++ SPC L +LP+ YI F G SR +I ++ F G +T
Sbjct: 10 FLGGIISFFSPCILPLLPV---YISLFSGLSTAELSVGNSRLRIFIYTLIFIAGFSTVYL 66
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
LGVG+SF G + L + I+ GL L+ +I+ F F A F
Sbjct: 67 ALGVGSSFIGTLFFDYQDYLRIIGGVFLILFGLVLIGLIKSGF--FVREFRLNVKAQKFG 124
Query: 237 SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
+ V A+L G+ FA SPC PVL ++L Y + S + G +L +Y+ G P L+++
Sbjct: 125 TPVGAFLIGVGFAAGWSPCIGPVLGSILIYSSMSGSIVSGIKMLGAYSMGIAIPFLISSL 184
Query: 297 FAG-ALQSLLSFRKFSSWINPMSGALLLGGGL 327
++ L F K WIN + G L+ GL
Sbjct: 185 LIDTVMRYLRKFMKIFRWINYLIGVSLIILGL 216
>gi|297588770|ref|ZP_06947413.1| probable c-type cytochrome biogenesis protein [Finegoldia magna
ATCC 53516]
gi|297574143|gb|EFH92864.1| probable c-type cytochrome biogenesis protein [Finegoldia magna
ATCC 53516]
Length = 227
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 18/208 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAG 186
AG++TS PC+L ++P+ +GY+ G+ + + ++ FSLG + G+ A+ G
Sbjct: 26 AGILTSFLPCSLPMIPIIIGYLS--GNNYDKKKSFKVALVFSLGSILVFTIFGLTAALVG 83
Query: 187 KAYGQIGTGLPLAASGLAIVMGL---NLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYL 243
K Q + L I+M ++++II L +++ + A++
Sbjct: 84 KILNQFSRVFYIVIGILLILMAFQNWHVIKIISLN----------KSSKITKTGLLGAFI 133
Query: 244 AGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQS 303
AG+ A+ ASPCSTPVL +L+ A +++ L L + Y G + ++A G ++
Sbjct: 134 AGVIQAVFASPCSTPVLVSLMAIAANTRNILFSIVLFIFYGIGNCFLVFMSALLMGKVEE 193
Query: 304 LL---SFRKFSSWINPMSGALLLGGGLY 328
++ S+ K S I + GA+L+ GLY
Sbjct: 194 IIQNDSYTKVSKIIEIVLGAVLMLFGLY 221
>gi|39937532|ref|NP_949808.1| c-type cytochrome biogenesis protein [Rhodopseudomonas palustris
CGA009]
gi|39651391|emb|CAE29913.1| putative c-type cytochrome biogenesis protein [Rhodopseudomonas
palustris CGA009]
Length = 247
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 109/226 (48%), Gaps = 16/226 (7%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYI----------GAFGSGKS-RAQIIGDS 164
+S SL FGAG+++ LSPC L ++P L ++ GA K+ +++ S
Sbjct: 2 VSNISLVGAFGAGVLSFLSPCVLPLVPPYLCFLAGVSLDQLTRGADQPSKTVDGRVVAAS 61
Query: 165 IAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFD 224
+AF LG +T LG AS GKA L + A + IV+GL+ L + + L
Sbjct: 62 LAFVLGFSTVFVALGASASAIGKAVTDHFEALGIVAGVIIIVLGLHFLGLFRIGLLYREA 121
Query: 225 NFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYT 284
F + V AY+ GL FA +PC PVLAT+L G LL +Y+
Sbjct: 122 RFHNVSRGVGL---VGAYVVGLAFAFGWTPCVGPVLATILLVAGVDGSAAHGAVLLGAYS 178
Query: 285 TGYVAPLLLAASFAGALQSLLSFRK--FSSWINPMSGALLLGGGLY 328
G P LLA+ F+GA L++ + ++ M GAL+L G L+
Sbjct: 179 LGIGLPFLLASLFSGAFIRLMARLRAQMATVEKVMGGALVLTGVLF 224
>gi|424890480|ref|ZP_18314079.1| cytochrome c biogenesis protein [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393172698|gb|EJC72743.1| cytochrome c biogenesis protein [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 249
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 100/215 (46%), Gaps = 18/215 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAF------GSG------KSRAQIIGDSIAFSLGLATT 174
AG ++ LSPC L ++P L Y+ G G R ++ ++ F+LG AT
Sbjct: 14 AGALSFLSPCVLPLVPPYLCYMAGISVEQFRGGGAVAVAPDVRRGVLFSALLFTLGFATV 73
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
LG GAS G A Q L + IVMGLN L + L L + + R
Sbjct: 74 FVALGAGASSIGMALRQHLDLLSKIGGLIIIVMGLNFLGVFRLGLLAR----EARFQGGG 129
Query: 235 FPSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
P+++ AY+ GL FA +PC PVL +LG A+ + G LL Y+ G P +
Sbjct: 130 KPATLTGAYIMGLAFAFGWTPCIGPVLGAILGVAASRETVGSGAGLLAVYSLGLAIPFWI 189
Query: 294 AASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
AA F+GA LS FR+ + + G L+ GL
Sbjct: 190 AAGFSGAFMRFLSRFRRHLGTVEKVMGVFLVLTGL 224
>gi|240850748|ref|YP_002972148.1| cytochrome c-type biogenesis protein, transmembrane region
[Bartonella grahamii as4aup]
gi|240267871|gb|ACS51459.1| cytochrome c-type biogenesis protein, transmembrane region
[Bartonella grahamii as4aup]
Length = 261
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 96/217 (44%), Gaps = 17/217 (7%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ-----------IIGDSIAFSLGLA 172
+F AG ++ LSPC L ++P L Y+ G R++ ++ IAF LG
Sbjct: 9 VFFAGALSFLSPCVLPLVPPYLCYMAGVGIDDFRSENRDEKVFIRWALLSSVIAFVLGFT 68
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
T LG AS GK G LAA + I+ GLN L I ++ F + R
Sbjct: 69 TVFVALGASASTIGKFIGYYRDWFALAAGIVIIIFGLNFLGIFKIA----FLFREARFQT 124
Query: 233 ANFPS-SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
PS + AY+ GL FA +PC P+L ++ T + G LL Y G P
Sbjct: 125 KKTPSGPLGAYIIGLAFAFGWTPCIGPILGPIITLAGTKETVGEGAVLLAVYALGLAIPF 184
Query: 292 LLAASFAGALQSLL-SFRKFSSWINPMSGALLLGGGL 327
+LAA F+ + L +FR + + G L+ G+
Sbjct: 185 MLAALFSSSFMRFLGAFRIHLGKVEKIIGVFLILTGI 221
>gi|418056213|ref|ZP_12694266.1| cytochrome c biogenesis protein transmembrane region
[Hyphomicrobium denitrificans 1NES1]
gi|353209432|gb|EHB74835.1| cytochrome c biogenesis protein transmembrane region
[Hyphomicrobium denitrificans 1NES1]
Length = 265
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 101/219 (46%), Gaps = 28/219 (12%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD--------------SIAFSLGLA 172
AGL + LSPC L ++P LGYIG G + Q+ G+ S+ F LG
Sbjct: 14 AGLASFLSPCVLPLVPPYLGYIG----GTTLDQLTGEDAVDRRVWGRVVISSLFFVLGFT 69
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
T LG GAS G+ L A + ++ GL+ L + + L + A
Sbjct: 70 TVFVALGAGASTIGQVLLAYRASLGTIAGIVIVLFGLHFLGVFRIPLVYSEARYSHAAEE 129
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
A+F V AY+ GL FA +PC PVLAT+L A+ G LL +Y+ G P +
Sbjct: 130 ASF---VSAYIMGLAFAFGWTPCIGPVLATVLTLAASETSLWAGVKLLFAYSLGLGVPFV 186
Query: 293 LAA----SFAGALQSLLSFRKFSSWINPMSGALLLGGGL 327
LAA F G ++ F+K + + + G LL+ GL
Sbjct: 187 LAAIAIRPFLGFMK---RFKKHFTTLEKLMGLLLIAMGL 222
>gi|400754122|ref|YP_006562490.1| ccdA-like protein SoxV [Phaeobacter gallaeciensis 2.10]
gi|398653275|gb|AFO87245.1| ccdA-like protein SoxV [Phaeobacter gallaeciensis 2.10]
Length = 245
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD------------SIAFSLGLA 172
F AGL++ +PC L ++P L Y+G + R + GD SI F+ G+
Sbjct: 10 FVAGLLSFFTPCVLPMVPFYLSYMGGLSMAELRNE--GDIAPGAQRRLVLASICFAAGVT 67
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
T L+G+GA+ G+ +GQ L A+ L +V GL+ L ++ + L + A+
Sbjct: 68 TVFVLMGMGATALGQLFGQYLDILAYGAAALLLVFGLHFLGVVRIPLLYREARVESSASP 127
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
A F AY+ GL F +PC P LA++L + D GG LL+ Y AP +
Sbjct: 128 ATFAG---AYMMGLAFGFGWTPCVGPALASILMIASGMGDIWRGGLLLMVYGAAMTAPFV 184
Query: 293 LAASFAGALQSLLS-FRKFSSWINPMSGALLL 323
+AA FA ++ R +W+ G +L+
Sbjct: 185 VAALFARPFLGFVARHRAAFAWVEKGMGVMLI 216
>gi|414174156|ref|ZP_11428783.1| hypothetical protein HMPREF9695_02429 [Afipia broomeae ATCC 49717]
gi|410890790|gb|EKS38589.1| hypothetical protein HMPREF9695_02429 [Afipia broomeae ATCC 49717]
Length = 242
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 103/206 (50%), Gaps = 16/206 (7%)
Query: 113 LSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIG---AFGS--GKSRAQIIGDSIAF 167
++ +S L F AG V+ LSPC L ++P + Y+ GS GK+R + +G S+ F
Sbjct: 1 MALISNIGLTTAFAAGAVSFLSPCVLPLVPGYVSYVAGQSVVGSTAGKARLRTLGLSLCF 60
Query: 168 SLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGL---NLLEIIELQLPSFFD 224
LG +T LLG+GA+ + LA+ L I+ GL LL + LQ +
Sbjct: 61 VLGFSTVFVLLGLGANALSMLLNAYRWEVNLASGLLVIIFGLFTAGLLRLPWLQRELRWH 120
Query: 225 NFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYT 284
P + V AY G+ FA +PC PVL +L V+TS L G LL++Y+
Sbjct: 121 GNPPGS------GPVAAYFLGMAFAFGWTPCIGPVLGAVLA-VSTSSSNLNGVALLVAYS 173
Query: 285 TGYVAPLLLAASFAGA-LQSLLSFRK 309
G P +LAA F G ++ L +FR+
Sbjct: 174 LGLGLPFILAALFMGGFVERLRTFRQ 199
>gi|89069853|ref|ZP_01157187.1| putative cytochrome c-type biogenesis protein CcdA [Oceanicola
granulosus HTCC2516]
gi|89044529|gb|EAR50648.1| putative cytochrome c-type biogenesis protein CcdA [Oceanicola
granulosus HTCC2516]
Length = 250
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 97/208 (46%), Gaps = 10/208 (4%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAF------GSGKSRAQIIGDSIAFSLGLATTLALLGV 180
AGL++ LSPC L ++P L Y+G G SR ++ + F LGL+T LLG
Sbjct: 21 AGLLSFLSPCVLPIVPPYLAYMGGVSVNELDGEAASRRKVTVAAAFFVLGLSTVFLLLGF 80
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
S G+ + Q A + ++ G + L I + F D A S+
Sbjct: 81 AFSALGRMFLQFQDWFVWGAGIVIMIFGAHFLGIFRI---GFMDREARLDAGERGGSAFG 137
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGA 300
A++ GL FA +PC P+L +LG A+ D G LL+ Y G P LL A+F
Sbjct: 138 AFVLGLAFAFGWTPCLGPILGAILGLAASEADMGRGTALLVFYALGLGIPFLLVAAFFPR 197
Query: 301 LQSLLSF-RKFSSWINPMSGALLLGGGL 327
++ +++ ++ I +SG LL GL
Sbjct: 198 MKGAMAWMKRHMGRIERVSGLLLWTVGL 225
>gi|424894940|ref|ZP_18318514.1| cytochrome c biogenesis protein [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393179167|gb|EJC79206.1| cytochrome c biogenesis protein [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 249
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 100/215 (46%), Gaps = 18/215 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAF------GSG------KSRAQIIGDSIAFSLGLATT 174
AG ++ LSPC L ++P L Y+ G G R ++ ++ F+LG AT
Sbjct: 14 AGALSFLSPCVLPLVPPYLCYMAGISVEQFRGGGAVAVAPDVRRGVLFSALLFTLGFATV 73
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
LG GAS G A Q L + IVMGLN L + L L + + R
Sbjct: 74 FVALGAGASSIGMALRQHLDLLSKLGGLIIIVMGLNFLGVFRLGLLAR----EARFQGGG 129
Query: 235 FPSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
P+++ AY+ GL FA +PC PVL +LG A+ + G LL Y+ G P +
Sbjct: 130 KPATLTGAYIMGLAFAFGWTPCIGPVLGAILGVAASRETVGSGAGLLAVYSLGLAIPFWI 189
Query: 294 AASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
AA F+GA LS FR+ + + G L+ GL
Sbjct: 190 AAGFSGAFMRFLSRFRRHLGTVEKVMGVFLVLTGL 224
>gi|168177607|ref|ZP_02612271.1| putative cytochrome c-type biogenesis protein CcdA [Clostridium
botulinum NCTC 2916]
gi|168182124|ref|ZP_02616788.1| putative cytochrome c-type biogenesis protein CcdA [Clostridium
botulinum Bf]
gi|237793583|ref|YP_002861135.1| DsbD family protein [Clostridium botulinum Ba4 str. 657]
gi|182670322|gb|EDT82296.1| putative cytochrome c-type biogenesis protein CcdA [Clostridium
botulinum NCTC 2916]
gi|182674557|gb|EDT86518.1| putative cytochrome c-type biogenesis protein CcdA [Clostridium
botulinum Bf]
gi|229260926|gb|ACQ51959.1| DsbD family protein [Clostridium botulinum Ba4 str. 657]
Length = 227
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 6/205 (2%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYI--GAFGSGKSRAQIIGDSIAFSLGLATTLALLGV 180
++F G++T +SPC L ++P+ + Y G + + + + SIAF G LLGV
Sbjct: 5 LLFLEGIITFISPCILPMIPIYVSYFAGGDIDNKNYKNRSLISSIAFVAGFTFVFTLLGV 64
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
A G + + + + + + ++ GLN L II + L +F + SS+
Sbjct: 65 AAGTVGVIFNKYMREINIVSGSIMVIFGLNYLGIINVGL--LHRSFKINKPTGHKKSSIM 122
Query: 241 AY-LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
+ L G+ F +PC P L + L + S + +G ++L+ Y+ G P +L+A
Sbjct: 123 STALFGMIFGFGWTPCVGPFLGSALMIASNSTNVFMGASMLMIYSLGLGIPFILSALLID 182
Query: 300 ALQSLLSF-RKFSSWINPMSGALLL 323
+L++ F +K IN +SG LL+
Sbjct: 183 SLKTTFEFIKKNYKIINKISGGLLI 207
>gi|169334257|ref|ZP_02861450.1| hypothetical protein ANASTE_00655 [Anaerofustis stercorihominis DSM
17244]
gi|169258974|gb|EDS72940.1| cytochrome C biogenesis protein transmembrane region [Anaerofustis
stercorihominis DSM 17244]
Length = 230
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 93/169 (55%), Gaps = 15/169 (8%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGA 182
V F AG++ S +PC+LS +PL +GY+G G ++ ++ S+ F++G A T +LG A
Sbjct: 23 VAFFAGILVSFTPCSLSSIPLIVGYVGMNGKEDTK-KLFKLSVTFAVGTALTFTVLGTLA 81
Query: 183 SFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAY 242
S GK + L+ IV+G+ ++ ++ LQ F NF P + + + Y
Sbjct: 82 SMLGKV-------MTLSGQWFYIVLGV-IMVLMALQTFELF-NFIPSTYLVS-KNEKRGY 131
Query: 243 ----LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGY 287
L+G+ + +SPCSTPVL +LG VA S + L G LL+ Y+ G+
Sbjct: 132 GGALLSGILAGVFSSPCSTPVLVVILGIVAGSGNILWGILLLVCYSIGH 180
>gi|190891673|ref|YP_001978215.1| cytochrome c biogenesis protein [Rhizobium etli CIAT 652]
gi|190696952|gb|ACE91037.1| cytochrome c biogenesis protein [Rhizobium etli CIAT 652]
Length = 249
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 101/215 (46%), Gaps = 18/215 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGA-----FGSGKS-------RAQIIGDSIAFSLGLATT 174
AG ++ LSPC L ++P L Y+ F G + R ++ ++ F+LG AT
Sbjct: 14 AGALSFLSPCVLPLVPPYLCYMAGISVEQFRGGSAVAVAPDVRRGVLFSALFFTLGFATV 73
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
LG GAS G A Q L + IVMGLN L + + F + R +
Sbjct: 74 FVALGAGASSIGMALRQHLDLLSKIGGLIIIVMGLNFLGLFRIG----FLGREARFQSGG 129
Query: 235 FPSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
P+++ AY+ GL FA +PC PVL +LG A+ + G LL Y+ G P +
Sbjct: 130 KPATLTGAYVMGLAFAFGWTPCIGPVLGAILGVAASRETVGSGAGLLAIYSLGLAIPFWI 189
Query: 294 AASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
AA F+GA LS FR+ + + G L+ GL
Sbjct: 190 AAGFSGAFMRFLSRFRRHLGTVEKVMGVFLILTGL 224
>gi|403388562|ref|ZP_10930619.1| cytochrome c biogenesis protein transmembrane region [Clostridium
sp. JC122]
Length = 400
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 111/223 (49%), Gaps = 12/223 (5%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGY-----IGAFGSGKSR---AQIIGDSIAFSLG 170
+L ++F GL++ SPC L +LP+ L + + +G+ + + + ++I F+LG
Sbjct: 4 VNLLIVFIQGLLSFFSPCILPILPIYLSILSNSSVQSLKNGEDKFIKSSLFKNTIFFTLG 63
Query: 171 LATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRA 230
++TT +LG + + + + I+MGL + I+ L + ++
Sbjct: 64 ISTTFFILGSSVNALSSFFNTNKNMIMFIGGIIIIIMGLFYMGILNFSLLNKEKRYNMEV 123
Query: 231 AAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAP 290
+V AYL G TF+ +PC P+LA++L ++S L G L+ +YT G++ P
Sbjct: 124 KEM---KAVSAYLLGFTFSFGWTPCVGPILASVLIIASSSSTMLKGNILIATYTIGFILP 180
Query: 291 LLLAASFAGAL-QSLLSFRKFSSWINPMSGALLLGGGLYTFLD 332
L+ A F L ++L + + I + G +L+G G++ ++
Sbjct: 181 FLITALFYNKLFKTLDKIKLYMDIIKKIGGLILIGAGMFMIIN 223
>gi|51892870|ref|YP_075561.1| cytochrome C biogenesis protein [Symbiobacterium thermophilum IAM
14863]
gi|51856559|dbj|BAD40717.1| cytochrome C biogenesis protein [Symbiobacterium thermophilum IAM
14863]
Length = 234
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAF-------GSGKSRAQIIGDSIAFSLGLATTLAL 177
FGAG+++ +SPC L + P L Y+ GS RA ++ S+AF G +
Sbjct: 10 FGAGVLSFVSPCVLPIYPSFLSYLTGVSVDQLSEGSRAVRAHVLKHSLAFFAGFSVIYVA 69
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
LG+ AS G + + LP+ +MGL+++ I L++P F D R A+ P
Sbjct: 70 LGLTASALGSFFYSSRSWLPVVGGIFIALMGLSMMGI--LRVP--FLMRDTRRQLASRPE 125
Query: 238 S-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
+ + L GLTFA +PC P+L +L ATS P GG LLL+Y+ G+ P +
Sbjct: 126 GYLGSALIGLTFAAGWTPCIGPILGAVLALAATS--PGYGGLLLLAYSVGFALPFI---G 180
Query: 297 FAGALQSLLSFRKFSSWINPMSGALLL 323
A AL S+ S + S I + GA+++
Sbjct: 181 MAYALGSVRSLARHSVAIQRVGGAVMV 207
>gi|154245472|ref|YP_001416430.1| cytochrome c biogenesis protein transmembrane subunit [Xanthobacter
autotrophicus Py2]
gi|154159557|gb|ABS66773.1| cytochrome c biogenesis protein transmembrane region [Xanthobacter
autotrophicus Py2]
Length = 241
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 98/209 (46%), Gaps = 9/209 (4%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYI-----GAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
F AGL++ SPC L ++P LG++ G G R ++I S+ F LG +T LLG
Sbjct: 11 FLAGLLSFASPCVLPLVPAYLGFLTGTVAGHEGEAAPRRRVIAASVLFVLGFSTVFILLG 70
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
AS G+ + L L + L ++ GL++ ++ + L D AAA V
Sbjct: 71 ATASTLGQILMRHVEALTLVSGALLVLFGLHMTGLVRIPLLYRQAKID---AAATPAGLV 127
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
YL GL F SPC PVLA +L G LL Y G P LLAA+F G
Sbjct: 128 GPYLIGLAFGFGWSPCVGPVLAAILMVAGAEASVGKGMALLAVYAAGIGIPFLLAAAFTG 187
Query: 300 A-LQSLLSFRKFSSWINPMSGALLLGGGL 327
L S R+ I ++GALL+ GL
Sbjct: 188 PFLAWAASARRRLGLIEKVAGALLILTGL 216
>gi|302036221|ref|YP_003796543.1| cytochrome c biogenesis protein CcdA [Candidatus Nitrospira
defluvii]
gi|300604285|emb|CBK40617.1| Cytochrome c biogenesis protein CcdA [Candidatus Nitrospira
defluvii]
Length = 248
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFG---------SGKSRAQIIGDSIAFSLG 170
SL F AGL++ +SPC L ++P + YI + R II +S+ F G
Sbjct: 9 SLVAAFSAGLLSFVSPCVLPLVPSYISYITGLSIEQLTDVSERNRFRKAIILNSLLFIAG 68
Query: 171 LATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRA 230
+T G AS G+A L + I+ GL LL I+ L + R
Sbjct: 69 FSTVFVAFGASASLLGQALITYQEHLRRFGGIVVIIFGLYLLGILNLNFLKMEHRYQFRN 128
Query: 231 AAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAP 290
A F S +L G+ FA +PC PVL T+L Y +T++ L G LL Y+ G P
Sbjct: 129 RPAGFLGS---FLIGIAFAAGWTPCVGPVLGTILLYASTTESMLSGVVLLTFYSLGLALP 185
Query: 291 LLLAASFAGALQSLLSFRKFSSW---INPMSGALLLGGGLYTFLDRL 334
L L A G + L F++ ++ ++ +SG LL+ G+ + + L
Sbjct: 186 LFLTA--LGVDRFLSYFKEVRAYLWGVSTVSGVLLIVVGVMIYANSL 230
>gi|226947487|ref|YP_002802578.1| DsbD family protein [Clostridium botulinum A2 str. Kyoto]
gi|226843477|gb|ACO86143.1| DsbD family protein [Clostridium botulinum A2 str. Kyoto]
Length = 227
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 6/205 (2%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYI--GAFGSGKSRAQIIGDSIAFSLGLATTLALLGV 180
++F G++T +SPC L ++P+ + Y G + + + + SIAF G LLGV
Sbjct: 5 LLFLEGIITFISPCILPMIPIYVSYFAGGDIDNKNYKNRSLISSIAFVAGFTFVFTLLGV 64
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
A G + + + + + + ++ GLN L II + L +F + SS+
Sbjct: 65 AAGTVGVIFNKYMREINIVSGSIMVIFGLNYLGIINVGL--LHRSFRINKPTGHKKSSIM 122
Query: 241 AY-LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
+ L G+ F +PC P L + L + S + +G ++L+ Y+ G P +L+A
Sbjct: 123 STALFGMIFGFGWTPCVGPFLGSALMIASNSTNVFMGASMLMIYSLGLGIPFILSALLID 182
Query: 300 ALQSLLSF-RKFSSWINPMSGALLL 323
+L++ F +K IN +SG LL+
Sbjct: 183 SLKTTFEFIKKNYKIINKISGGLLI 207
>gi|298290978|ref|YP_003692917.1| cytochrome c biogenesis transmembrane protein [Starkeya novella DSM
506]
gi|296927489|gb|ADH88298.1| cytochrome c biogenesis protein transmembrane region [Starkeya
novella DSM 506]
Length = 244
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 113/228 (49%), Gaps = 27/228 (11%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFG--------SGKSRAQIIGDSIAFSLGLATTLA 176
FGAGL++ SPC L ++P LG++G G +G +R ++I SIAF G ++
Sbjct: 11 FGAGLLSFASPCVLPLVPAYLGFLGGAGRGLAEQSGAGTTRRRLIALSIAFVGGFSSVFI 70
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL-----QLPSFFDNFDPRAA 231
LLG AS QIG L + A L +V G L+ ++P + P A
Sbjct: 71 LLGATAS-------QIGQWLAVHAPALTMVAGAVLVLFGLHFLGLLRIPLLYRRVAPDVA 123
Query: 232 AANFPSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLL-SYTTGYVA 289
A P+ + AYL GL F +PC P+L+ +L +A ++D L G LLL +Y G
Sbjct: 124 RA--PAGLTGAYLIGLAFGFGWTPCVGPILSMIL-IIAGTEDSLGKGVLLLAAYAAGIGL 180
Query: 290 PLLLAASFA-GALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFP 336
P + AA+F+ G L+ + R I +SG LL+ G+ F+ P
Sbjct: 181 PFIAAAAFSTGFLRWSAAIRSRLGLIEKLSGVLLVATGI-VFMGGWMP 227
>gi|126728738|ref|ZP_01744553.1| cytochrome c-type biogenesis protein CcdA [Sagittula stellata E-37]
gi|126710668|gb|EBA09719.1| cytochrome c-type biogenesis protein CcdA [Sagittula stellata E-37]
Length = 252
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 93/203 (45%), Gaps = 10/203 (4%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKSRAQIIGDSIAFSLGLATTLALLGVG 181
AGLV+ LSPC L ++P L ++ G+ R ++ ++ F LGL+T LLG
Sbjct: 25 AGLVSFLSPCVLPIVPPYLAFMSGLSLNEMQEGRKRGKVALAALFFVLGLSTIFVLLGFT 84
Query: 182 ASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQA 241
AS+ G + L A + IV GL+ L + + F D + R S+ A
Sbjct: 85 ASWLGSFFLTNQVLLGRIAGAVVIVFGLHFLGVFRI---GFLDR-EMRMEGGEGGSAFGA 140
Query: 242 YLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGAL 301
Y+ GL FA +PC P L +L AT G LL Y G P LLAA F G
Sbjct: 141 YILGLAFAFGWTPCIGPQLGAILSLAATEASVARGTVLLAVYAAGLGIPFLLAAIFLGRA 200
Query: 302 QSLLS-FRKFSSWINPMSGALLL 323
L++ ++ I + G LL+
Sbjct: 201 VGLMNRLKRHMGLIEKVMGVLLI 223
>gi|27378619|ref|NP_770148.1| cytochrome c-type biogenesis protein [Bradyrhizobium japonicum USDA
110]
gi|27351767|dbj|BAC48773.1| cytochrome c-type biogenesis protein [Bradyrhizobium japonicum USDA
110]
Length = 243
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 114/228 (50%), Gaps = 16/228 (7%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAF-------GSGKSRAQIIGDSIAFSLGL 171
+L F AGL++ LSPC L ++P L Y+ G R +I+ ++AF G
Sbjct: 5 VTLGAAFVAGLLSFLSPCILPLVPPFLCYMAGVSVNDLSGGKPDLRPRILVSALAFVAGF 64
Query: 172 ATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAA 231
+ LG AS AG+ + L + A GL IVMGL+ L + L++P + +
Sbjct: 65 SLVFVALGSTASLAGRLISAHLSTLGIVAGGLIIVMGLHFLGV--LRIPLLYRS--ATVQ 120
Query: 232 AANFPSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLL-SYTTGYVA 289
N P+ V A++ GL FA +PC+ P+LA +L +A S+D G LLL +Y+ G
Sbjct: 121 VDNRPAGVAGAFVMGLAFAFGWTPCAGPILAAVL-LMAGSEDTTGRGALLLFAYSIGTGI 179
Query: 290 PLLLAASFAGA-LQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFP 336
P L+AA+F G + +L R+ + G L+ GL FL L P
Sbjct: 180 PFLIAAAFTGRFIVALGRARRHLGLVEKTMGVFLVATGLM-FLTGLMP 226
>gi|424834389|ref|ZP_18259100.1| putative cytochrome c-type biogenesis protein [Clostridium
sporogenes PA 3679]
gi|365978735|gb|EHN14804.1| putative cytochrome c-type biogenesis protein [Clostridium
sporogenes PA 3679]
Length = 228
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 98/191 (51%), Gaps = 16/191 (8%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLAL 177
F +L + F G+++S SPC LS LPL +GY+ +G + S+ FSLG+ T L
Sbjct: 17 FLALLISFLGGIISSFSPCVLSSLPLIIGYVNKYGKNDKKTAF-KYSLFFSLGIIITFTL 75
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
LG+ +S G+ + G L + + +GL L+ +IE + A P
Sbjct: 76 LGIISSLVGRLFTSGGKLWYLLLGIIMLFVGLQLIGVIE-----------SKNKACKVPK 124
Query: 238 SVQ----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
+ A+ G+ + +SPCSTP+L +L +V + + L+G +LL Y+ G+ ++L
Sbjct: 125 KRKGVLGAFFLGILGGVLSSPCSTPILIAILAFVGSKGNILLGFLMLLLYSIGHCFVIIL 184
Query: 294 AASFAGALQSL 304
+ + G ++S+
Sbjct: 185 SGTSLGFVESI 195
>gi|169343269|ref|ZP_02864280.1| membrane protein [Clostridium perfringens C str. JGS1495]
gi|169298567|gb|EDS80648.1| membrane protein [Clostridium perfringens C str. JGS1495]
Length = 230
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 112/216 (51%), Gaps = 8/216 (3%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLAL 177
F ++ + F AG+V S SPCTLS +PL +GY+ K + S+ FS+GL T +
Sbjct: 16 FLAIILSFFAGVVASFSPCTLSSIPLLIGYVQG-SEVKDNKKAFKYSLIFSIGLGITFTV 74
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
+G+ + GKA+ G + + + I GL +L++I L F D D
Sbjct: 75 IGLLTALIGKAFLGAGKFWYIILAFIMIGSGLQVLDVINL----FGDKKDACKITKRREG 130
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
+ A+ G+ + ASPC+TP++A ++ ++A S + +IG +LL Y+ G+ ++LA +
Sbjct: 131 ILDAFFLGILSGILASPCATPIMAAIIAFIAASGNLVIGMIMLLMYSLGHSVLIILAGTS 190
Query: 298 AGALQSLL---SFRKFSSWINPMSGALLLGGGLYTF 330
G ++ + +K + + G +++ GLY F
Sbjct: 191 FGLVEKIAYSEKGKKIGRVLKNILGTIIILVGLYLF 226
>gi|302380243|ref|ZP_07268715.1| cytochrome C biogenesis protein transmembrane region [Finegoldia
magna ACS-171-V-Col3]
gi|302312026|gb|EFK94035.1| cytochrome C biogenesis protein transmembrane region [Finegoldia
magna ACS-171-V-Col3]
Length = 227
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 18/208 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAG 186
AG++TS PC+L ++P+ +GY+ G+ R + ++ FSLG + G+ A+ G
Sbjct: 26 AGILTSFLPCSLPMIPIIIGYLS--GNNYDRKKSFKVALVFSLGSILVFTIFGLTAALVG 83
Query: 187 KAYGQIGTGLPLAASGLAIVMGL---NLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYL 243
K Q + L I+M ++++II L +++ + A+L
Sbjct: 84 KILNQFSRVFYIIIGILLILMAFQNWHVIKIISLN----------KSSKITKTGLLGAFL 133
Query: 244 AGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQS 303
AG+ A+ ASPCSTPVL +L+ A +++ L L L Y G + ++A G ++
Sbjct: 134 AGVIQAVFASPCSTPVLVSLMAIAANTRNILFSIVLFLFYGIGNCFLVFMSALLMGKVEE 193
Query: 304 LL---SFRKFSSWINPMSGALLLGGGLY 328
++ S+ K S I + GA+L+ GLY
Sbjct: 194 IIQNDSYTKVSKIIEIVLGAVLMLFGLY 221
>gi|291288027|ref|YP_003504843.1| cytochrome c biogenesis protein transmembrane subunit
[Denitrovibrio acetiphilus DSM 12809]
gi|290885187|gb|ADD68887.1| cytochrome c biogenesis protein transmembrane region [Denitrovibrio
acetiphilus DSM 12809]
Length = 230
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 107/210 (50%), Gaps = 13/210 (6%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASF 184
F AGL TS +PC++ +PL +GYIG ++ ++ S+ F++G A LLG SF
Sbjct: 26 FAAGLATSFTPCSVGGIPLLIGYIGG-TDVRNSSKAFKLSLLFAIGGAVVYTLLGFTVSF 84
Query: 185 AGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLA 244
AG ++ + + L +M L ++++ E +PS NF R + ++ +A
Sbjct: 85 AG-SFIALSKVWYIILGILMTMMALQIMDVFEF-IPS--GNFISRDIRKGYAGAI---VA 137
Query: 245 GLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA----ASFAGA 300
G L +SPCSTPVL +L A S + G LL SY+ G+ + LL+A ASFA
Sbjct: 138 GALSGLFSSPCSTPVLVAILSIAAKSGNTAYGVLLLFSYSIGH-SILLIACGTSASFANR 196
Query: 301 LQSLLSFRKFSSWINPMSGALLLGGGLYTF 330
+ + + + I M ++L GLY F
Sbjct: 197 ILQQKRYHQATVVIKYMLAIVILAAGLYLF 226
>gi|254460433|ref|ZP_05073849.1| holoCytochrome c synthase [Rhodobacterales bacterium HTCC2083]
gi|206677022|gb|EDZ41509.1| holoCytochrome c synthase [Rhodobacteraceae bacterium HTCC2083]
Length = 246
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 99/212 (46%), Gaps = 13/212 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG----------SGKSRAQIIGDSIAFSLGLATTLA 176
AGL++ LSPC L ++P L Y+ G S + R + + F+LG+ T
Sbjct: 12 AGLLSFLSPCILPIVPFYLSYLAGVGMNQIAADAEVSPQVRLRAFAAACCFALGVITVFM 71
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
LG A+ G+ + L A+ + I MGL+ L +I++ + + F +
Sbjct: 72 GLGATATMFGQVVREYFDVLRWVAAAIIIAMGLHFLGVIKIGI--LYRQFRVDTGNSTNV 129
Query: 237 SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
+ A++ GL FA +PC PVLA +L A + G LL SY G P ++AA
Sbjct: 130 GLLGAFVIGLAFAFGWTPCVGPVLAAILFTAAGQESAGQGAVLLFSYGVGMTLPFIVAAL 189
Query: 297 FAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
F G ++ FR + I + GALL+ GL
Sbjct: 190 FIGPFMKWMARFRSYLGLIEKLMGALLIVFGL 221
>gi|404317901|ref|ZP_10965834.1| cytochrome c-type biogenesis protein CcdA [Ochrobactrum anthropi
CTS-325]
Length = 265
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 95/217 (43%), Gaps = 18/217 (8%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGK--------------SRAQIIGDSIAFSLGL 171
GAG ++ LSPC L ++P L Y+ +R + +I F LG
Sbjct: 27 GAGALSFLSPCVLPLVPPYLCYMAGVSVEDFRADKATAVAAAPSARRSLAFAAICFVLGF 86
Query: 172 ATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAA 231
T LG GAS G + + A + I+MGLN L I+ S F R A
Sbjct: 87 TTVFVALGAGASSIGAFLRAWQQEIAIVAGVVIILMGLNFLGILRFSFLSREARFQARNA 146
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
A S + AY+ GL FA +PC PVL +L S G LL +Y+ G P
Sbjct: 147 PA---SPLGAYVMGLAFAFGWTPCIGPVLGPILTLAGGSSTVGEGALLLATYSLGLGIPF 203
Query: 292 LLAASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
L+AA F+GA LS FR + GALL+ G+
Sbjct: 204 LIAALFSGAFMRFLSRFRVHLGKVEKAMGALLVAAGV 240
>gi|357040595|ref|ZP_09102381.1| cytochrome c biogenesis protein transmembrane region
[Desulfotomaculum gibsoniae DSM 7213]
gi|355356396|gb|EHG04185.1| cytochrome c biogenesis protein transmembrane region
[Desulfotomaculum gibsoniae DSM 7213]
Length = 232
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 108/221 (48%), Gaps = 13/221 (5%)
Query: 122 AVIFGAGLVTSLSPCTLSVLPLTLGYIGAF----GSGKSRAQIIGDSIAFSLGLATTLAL 177
A +FG ++ LSPC L +LP L +I + SR + + +S F LG +
Sbjct: 12 AFVFGG--LSFLSPCVLPLLPGYLSFIAGTDITGAAAPSRRRAMWNSTGFVLGFSVLFVS 69
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
LG AS AG+ T L AA + I+ GL++ EI+ ++L + P A F
Sbjct: 70 LGAAASSAGQWLISNQTLLKQAAGIIIIIFGLHISEILPIKLFYRQVKWQP---AQRFTG 126
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
+ A+ GL+FA +PC PVLA++L ++ G TLL+ Y+ G P LLAA
Sbjct: 127 WLGAFFLGLSFAAGWTPCVGPVLASILLLATNTQTLYQGVTLLIWYSMGLAIPFLLAALG 186
Query: 298 AGALQSLL-SFRKFSSWINPMSGALLLGGGL---YTFLDRL 334
G + S L K +IN +SG LL+ G+ DRL
Sbjct: 187 IGFVHSWLGKMNKVIPYINAVSGGLLIAMGVLLLLGLWDRL 227
>gi|83943675|ref|ZP_00956133.1| sulfur oxidation V protein [Sulfitobacter sp. EE-36]
gi|83845355|gb|EAP83234.1| sulfur oxidation V protein [Sulfitobacter sp. EE-36]
Length = 246
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 98/212 (46%), Gaps = 13/212 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGK----------SRAQIIGDSIAFSLGLATTLA 176
AGL++ LSPC L ++P L Y+ G + R + + ++ F+ G+ T
Sbjct: 12 AGLLSFLSPCILPIVPFYLSYLAGVGMNQITADGPVDAAVRRRAVIAALFFAAGVITIFV 71
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
LG A+ G+ L A+ + I MGL+ L +I + + F A
Sbjct: 72 GLGAVATTFGQIVRDYFDVLRWVAAAVIIAMGLHFLGVIRIGF--LYRQFRADAGNTTAT 129
Query: 237 SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
S + AY+ GL FA +PC PVLA +L A ++ G LLL+Y G AP +LAA
Sbjct: 130 SFLGAYVIGLAFAFGWTPCVGPVLAAILFTAAGAETAGSGALLLLTYGVGMTAPFVLAAL 189
Query: 297 FAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
F G ++ FR+ + G LL+ GL
Sbjct: 190 FIGPFMRWMAGFRQHLGTVEKAMGVLLIVFGL 221
>gi|386401357|ref|ZP_10086135.1| cytochrome c biogenesis protein [Bradyrhizobium sp. WSM1253]
gi|385741983|gb|EIG62179.1| cytochrome c biogenesis protein [Bradyrhizobium sp. WSM1253]
Length = 243
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 113/230 (49%), Gaps = 16/230 (6%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAF-------GSGKSRAQIIGDSIAFSLGL 171
+L F AGL++ LSPC L ++P L Y+ G R +I+ ++AF G
Sbjct: 5 VTLGAAFVAGLLSFLSPCILPLVPPFLCYMAGVSVTDLSGGRPDLRPRILISALAFVAGF 64
Query: 172 ATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAA 231
+ +LG AS AG+ + L + A L IVMGL+ + + ++P + +
Sbjct: 65 SLVFVVLGSTASIAGRFISAHLSTLGIVAGALIIVMGLHFVGL--FRIPLLYRS--ATVQ 120
Query: 232 AANFPSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLL-SYTTGYVA 289
N P+ V A++ GL FA +PC+ P+LA +L +A S+D G LLL +Y+ G
Sbjct: 121 VDNRPAGVAGAFVMGLAFAFGWTPCAGPILAAVL-LMAGSEDTTGRGALLLFAYSIGTGI 179
Query: 290 PLLLAASFAGALQSLL-SFRKFSSWINPMSGALLLGGGLYTFLDRLFPTT 338
P L+AA+F G + L R+ I G L+ GL FL L PT
Sbjct: 180 PFLVAAAFTGRFMAALGRVRRHLGLIEKTMGVFLVATGL-MFLTGLMPTV 228
>gi|392551760|ref|ZP_10298897.1| cytochrome c biogenesis protein [Pseudoalteromonas spongiae
UST010723-006]
Length = 227
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 109/226 (48%), Gaps = 32/226 (14%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFS----LGLATTLALL 178
VIF G++TSL+PC +LP+T+ + + A + S A++ LGLA + +LL
Sbjct: 21 VIFVTGVLTSLTPCVYPMLPITVAVV------RQHANNVYQSTAYTCLYVLGLALSYSLL 74
Query: 179 GVGASFAGKAYGQIGT--GLPLAASGLAIVMGLNLLEIIEL-QL---PSFFDNFDPRAAA 232
G A+ G +G + T + A +VM +L I + QL S F ++ P
Sbjct: 75 GYFAAKLGYLFGSVATHPAMLFIAGSFCLVMAAWMLGWINMPQLSVAKSSFSSYAP---- 130
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
+ +++G L +PC++PVL LL YV+T + PL+G L ++ G A L
Sbjct: 131 ------LNVFVSGALSGLVMAPCTSPVLGMLLMYVSTEQAPLVGPIYLFAFALGLSALLF 184
Query: 293 LAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLYTFLDRLF 335
+A F+ L SL K W+N ALL+G LY + F
Sbjct: 185 IAGIFSNVLNSL---PKSGPWLNGFKYILAALLIGVALYFYFQITF 227
>gi|357237989|ref|ZP_09125327.1| cytochrome C biogenesis protein transmembrane region [Streptococcus
ictaluri 707-05]
gi|356753235|gb|EHI70353.1| cytochrome C biogenesis protein transmembrane region [Streptococcus
ictaluri 707-05]
Length = 236
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 101/210 (48%), Gaps = 28/210 (13%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR-AQIIGDSI--------- 165
+SF + +F AG+++ SPC VLP+ LG + S SR I G I
Sbjct: 3 VSFIFVFSVFAAGVLSFFSPCIFPVLPVYLGIL--LDSDDSRTVTIFGKKIYWYGVVKTL 60
Query: 166 AFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSF--- 222
AF LGL+T +LG GA F G L A + I++G++ +E+I ++ F
Sbjct: 61 AFILGLSTIFVILGYGAGFLGNILYAAWFRYLLGA--IVILLGIHQMELITIKKLQFQKS 118
Query: 223 --FDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAT-SKDPLIGGTL 279
F N R A N A+L G+TF+ +PC PVL+++L VA+ GG L
Sbjct: 119 FQFQNKKERNAIVN------AFLLGITFSFGWTPCVGPVLSSVLALVASGGSGAWQGGLL 172
Query: 280 LLSYTTGYVAPLLLAASFAGALQSLLSFRK 309
++ YT G P LL SFA + L F K
Sbjct: 173 MIVYTLGLGIPFLL-LSFASGIM-LKQFNK 200
>gi|410728469|ref|ZP_11366646.1| cytochrome c biogenesis protein [Clostridium sp. Maddingley
MBC34-26]
gi|410596850|gb|EKQ51496.1| cytochrome c biogenesis protein [Clostridium sp. Maddingley
MBC34-26]
Length = 223
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 4/202 (1%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGA 182
++F G++T +SPC L +LPL + Y KSR I +S+ F LG LLG A
Sbjct: 5 LLFLEGIITFISPCILPMLPLYISYFAGESGSKSRYNSIINSLGFVLGFTIIFTLLGTLA 64
Query: 183 SFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAY 242
G T + + + + ++ GLN + I ++ + + F SS+
Sbjct: 65 GTFGNFIKHESTIINIISGLIIVIFGLNYIGIFKISILERSLKLNVEIKNFKFISSI--- 121
Query: 243 LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQ 302
L G+ FA+ +PC L L SKD + G +LL Y+ G P ++ A ++
Sbjct: 122 LFGMIFAIGWTPCVGTFLGAALMIAVNSKDIIKGTIMLLVYSIGLGIPFIVCAILIDKIK 181
Query: 303 SLLSF-RKFSSWINPMSGALLL 323
+F ++ IN +SGA+L+
Sbjct: 182 ETFNFIKRNYKIINIISGAILV 203
>gi|170760757|ref|YP_001785593.1| cytochrome c-type biogenesis protein CcdA [Clostridium botulinum A3
str. Loch Maree]
gi|169407746|gb|ACA56157.1| DsbD family protein [Clostridium botulinum A3 str. Loch Maree]
Length = 227
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 6/205 (2%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYI--GAFGSGKSRAQIIGDSIAFSLGLATTLALLGV 180
++F G++T +SPC L ++P+ + Y G + + + + SIAF G LLGV
Sbjct: 5 LLFLEGIITFISPCILPMIPIYVSYFAGGDIDNKNYKNKALISSIAFVAGFTFVFTLLGV 64
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
A G + + + + + ++ GLN L II + L +F + SS+
Sbjct: 65 AAGTVGVIFNTYMREINIVSGSIMVIFGLNYLGIINVGL--LHRSFKINKPTVHKKSSIM 122
Query: 241 AY-LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
+ L G+ F L +PC P L + L + S + +G ++L+ Y+ G P +L+A
Sbjct: 123 STALFGMIFGLGWTPCVGPFLGSALMIASNSTNVFMGASMLMIYSLGLGIPFILSALLID 182
Query: 300 ALQSLLSF-RKFSSWINPMSGALLL 323
+L++ F ++ IN +SG LL+
Sbjct: 183 SLKTTFEFIKRNYKIINRISGGLLI 207
>gi|301061941|ref|ZP_07202670.1| thioredoxin [delta proteobacterium NaphS2]
gi|300443958|gb|EFK07994.1| thioredoxin [delta proteobacterium NaphS2]
Length = 616
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 102/216 (47%), Gaps = 13/216 (6%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGAS 183
IF GL +L+PC ++P+T+ Y G G G + + + + LGLA T ++LGV A+
Sbjct: 229 IFLGGLALNLTPCVYPLIPITVSYFGGQG-GSMAGKPLVHGVFYILGLAITNSILGVSAA 287
Query: 184 FAGKAYGQIGTGL--PLA---ASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSS 238
+G G +G+ L P+ +G+ I + L+ + EL++P+ N AA NF
Sbjct: 288 LSG---GILGSALQSPIVLILVAGILIALALSFFGLWELRIPAGLTNM----AARNFGGY 340
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFA 298
GLT + A+PC P + LL YV DP +G + G PL + A F+
Sbjct: 341 FGTLFMGLTLGVVAAPCLGPFILGLLTYVGQKGDPALGFLYFFVLSLGMGLPLAVLAVFS 400
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
+ L + WI G +L+G Y L L
Sbjct: 401 KGVDKLPMSGTWMIWIRKALGWVLVGMAGYMLLPVL 436
>gi|153010966|ref|YP_001372180.1| cytochrome c biogenesis protein transmembrane region [Ochrobactrum
anthropi ATCC 49188]
gi|151562854|gb|ABS16351.1| cytochrome c biogenesis protein transmembrane region [Ochrobactrum
anthropi ATCC 49188]
Length = 249
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 96/217 (44%), Gaps = 18/217 (8%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFG--------------SGKSRAQIIGDSIAFSLGL 171
GAG ++ LSPC L ++P L Y+ + +R + +I F LG
Sbjct: 11 GAGALSFLSPCVLPLVPPYLCYMAGVSVEDFRADKATAVAAAPSARRSLAFAAICFVLGF 70
Query: 172 ATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAA 231
T LG GAS G + + A + I+MGLN L I+ S F R A
Sbjct: 71 TTVFVALGAGASSIGAFLRAWQQEIAIVAGVVIILMGLNFLGILRFSFLSREARFQARNA 130
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
A S + AY+ GL FA +PC PVL +L S G LL +Y+ G P
Sbjct: 131 PA---SPLGAYVMGLAFAFGWTPCIGPVLGPILTLAGGSSTVGEGALLLATYSLGLGIPF 187
Query: 292 LLAASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
L+AA F+GA LS FR + GALL+ G+
Sbjct: 188 LIAALFSGAFMRFLSRFRVHLGKVEKAMGALLVAAGV 224
>gi|260425924|ref|ZP_05779903.1| ShxV protein [Citreicella sp. SE45]
gi|260420416|gb|EEX13667.1| ShxV protein [Citreicella sp. SE45]
Length = 245
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 108/213 (50%), Gaps = 24/213 (11%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD--------------SIAFSLGLA 172
AGL++ +PC L ++P L Y+ +G S ++ GD ++ F+ G+
Sbjct: 12 AGLLSFFTPCVLPMVPFYLCYM----AGLSMTELRGDQDLAAGAQRRLVLSALFFAAGVT 67
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
T LLG+GA+ G+A+ L AA+ L +V GL+ L +I ++P + + R +
Sbjct: 68 TIFVLLGMGATAVGQAFADWKQPLSYAAAALLLVFGLHFLGVI--RVPLLYR--EARLES 123
Query: 233 ANFPSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
P++V AYL GL F +PC P LA++L + D GG LLL Y G AP
Sbjct: 124 KAEPTTVLGAYLMGLAFGFGWTPCVGPALASILMIASGMGDIGRGGLLLLVYGIGMTAPF 183
Query: 292 LLAASFAGA-LQSLLSFRKFSSWINPMSGALLL 323
++AA F+G L+ R ++ + GA+L+
Sbjct: 184 VVAAVFSGPFLRWTARHRSKLQYVEKLMGAMLI 216
>gi|399039290|ref|ZP_10734894.1| cytochrome c biogenesis protein [Rhizobium sp. CF122]
gi|398062578|gb|EJL54348.1| cytochrome c biogenesis protein [Rhizobium sp. CF122]
Length = 249
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 103/215 (47%), Gaps = 18/215 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGA-----FGSG-------KSRAQIIGDSIAFSLGLATT 174
AG ++ LSPC L ++P L Y+ F G +R ++ ++ F+LG AT
Sbjct: 14 AGALSFLSPCVLPLVPPYLCYMAGISVEQFRGGSAVAVAPDTRRGVLFSALFFTLGFATV 73
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
LG GAS G A Q L + IVMGLN L + + + + + R +
Sbjct: 74 FVALGAGASSIGMALRQHLDLLAKIGGLIIIVMGLNFLGVFRIGILAR----EARFQGSG 129
Query: 235 FPSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
P+++ AY+ GL FA +PC PVL +LG A+ + G LL Y+ G P +
Sbjct: 130 KPATLTGAYIMGLAFAFGWTPCIGPVLGAILGVAASRETVGSGAGLLAVYSLGLAIPFWI 189
Query: 294 AASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
AA F+GA L+ FR+ + + G+ L+ GL
Sbjct: 190 AAGFSGAFMGFLTRFRRHLGTVEKVMGSFLILTGL 224
>gi|86357585|ref|YP_469477.1| cytochrome-c-type biogenesis protein [Rhizobium etli CFN 42]
gi|86281687|gb|ABC90750.1| cytochrome-c-type biogenesis protein [Rhizobium etli CFN 42]
Length = 249
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 100/215 (46%), Gaps = 18/215 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGY-----IGAFGSGKS-------RAQIIGDSIAFSLGLATT 174
AG ++ LSPC L ++P L Y + F G + R ++ ++ F+LG AT
Sbjct: 14 AGALSFLSPCVLPLVPPYLCYMAGISVDQFRGGSAVAVAPDVRRGVLFSALFFTLGFATV 73
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
LG GAS G A Q L + IVMGLN L + + F + R +
Sbjct: 74 FVALGAGASSIGMALRQHLDLLSKIGGLIIIVMGLNFLGLFRIG----FLGREARFQSGG 129
Query: 235 FPSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
P+++ AY+ GL FA +PC PVL +LG A+ + G LL Y+ G P +
Sbjct: 130 KPATLTGAYVMGLAFAFGWTPCIGPVLGAILGVAASRETVGSGAGLLAIYSLGLAIPFWI 189
Query: 294 AASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
AA F+GA LS FR + + G L+ GL
Sbjct: 190 AAGFSGAFMRFLSRFRHHLGTVEKVMGVFLILTGL 224
>gi|428213145|ref|YP_007086289.1| cytochrome c biogenesis protein [Oscillatoria acuminata PCC 6304]
gi|428001526|gb|AFY82369.1| cytochrome c biogenesis protein [Oscillatoria acuminata PCC 6304]
Length = 283
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 107/217 (49%), Gaps = 24/217 (11%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGV 180
L + F G + S+SPC L++LP+ L YIG SR + F LG T L+L G+
Sbjct: 75 LPLAFLGGGIASVSPCILALLPVNLSYIGTLKI-TSRWDAFKKAGLFVLGAVTILSLFGL 133
Query: 181 GASFAG------KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
+SFAG + Y I GL +A VMGL L+ ++++ LP N P A
Sbjct: 134 VSSFAGAVMVDYRGYINITVGLIMA------VMGLWLIGVVKMPLPQMDINL-PVAGP-- 184
Query: 235 FPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
Y GLTFAL +SPC++PVL +L A + L+G ++SY GY + L+
Sbjct: 185 -------YGVGLTFALVSSPCASPVLFAVLAAAAATGSQLLGTLTMVSYALGYTLLIFLS 237
Query: 295 ASFAG-ALQSLLSFRKFSSWINPMSGALLLGGGLYTF 330
+ F G A QS + I S AL+L G Y F
Sbjct: 238 SLFTGLAKQSKQLLQHSEGVIRFGSLALILTGTYYLF 274
>gi|220932655|ref|YP_002509563.1| cytochrome c biogenesis protein transmembrane protein
[Halothermothrix orenii H 168]
gi|219993965|gb|ACL70568.1| cytochrome c biogenesis protein transmembrane region
[Halothermothrix orenii H 168]
Length = 225
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 103/202 (50%), Gaps = 16/202 (7%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLP--LTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLA 176
+ + F AG+++ LSPC L ++P +TL +G + K + + ++ F LG
Sbjct: 5 VNFVIAFSAGVLSFLSPCVLPLIPSYVTL-LLGDYAEKKGENRPLTPALIFILGFTIVFM 63
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
LG+ AS GK Q L + + I++GL+L I++++ + + R +F
Sbjct: 64 TLGMSASLLGKVLIQNQIILRKVSGVIIIILGLHLSGILKIK--TLY-----REKTWHFG 116
Query: 237 SSVQAYLA----GLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
++ YL G+ ALA +PC PVL+++L Y +TS L GG LL Y+ G+ P +
Sbjct: 117 QNLNKYLRALVMGIGLALAWTPCIGPVLSSILIYASTSSTILQGGMLLFFYSAGFAIPFI 176
Query: 293 LAASFAGALQSLLSFRKFSSWI 314
L A F L L ++K + ++
Sbjct: 177 LTAVFFNWL--LPRYKKLNPYL 196
>gi|300023141|ref|YP_003755752.1| cytochrome C biogenesis protein transmembrane region
[Hyphomicrobium denitrificans ATCC 51888]
gi|299524962|gb|ADJ23431.1| cytochrome c biogenesis protein transmembrane region
[Hyphomicrobium denitrificans ATCC 51888]
Length = 265
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 101/219 (46%), Gaps = 28/219 (12%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD--------------SIAFSLGLA 172
AGL + LSPC L ++P LGYIG G + Q+ G+ S+ F LG
Sbjct: 14 AGLASFLSPCVLPLVPPYLGYIG----GTTLDQLTGEDEVDRRVWGRVVVSSMFFVLGFT 69
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
T LG GAS G+ L A + ++ GL+ L + + L + A
Sbjct: 70 TVFVALGAGASTVGQVMLSYRAELGTIAGIIILLFGLHFLGVFRIPLLYSEARYSHAAEE 129
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
A+F + AY+ GL FA +PC PVLAT+L A+ G LL +Y+ G P +
Sbjct: 130 ASF---ISAYVMGLAFAFGWTPCIGPVLATVLTLAASETSLWAGVKLLFAYSLGLGVPFV 186
Query: 293 LAA----SFAGALQSLLSFRKFSSWINPMSGALLLGGGL 327
LAA F G ++ F+K + + + G LL+ GL
Sbjct: 187 LAAIAIRPFLGFMK---RFKKHFTTLERIMGLLLIAMGL 222
>gi|422347602|ref|ZP_16428513.1| hypothetical protein HMPREF9476_02586 [Clostridium perfringens
WAL-14572]
gi|373223872|gb|EHP46216.1| hypothetical protein HMPREF9476_02586 [Clostridium perfringens
WAL-14572]
Length = 230
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 112/216 (51%), Gaps = 8/216 (3%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLAL 177
F ++ + F AG+V S SPCTLS +PL +GY+ K + S+ FS+GL T +
Sbjct: 16 FLAIILSFFAGVVASFSPCTLSSIPLLIGYVQG-SEVKDNKKAFKYSLIFSIGLGITFTV 74
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
+G+ + GKA+ G + + + I GL +L++I L F D D
Sbjct: 75 IGLLTALIGKAFLGAGKFWYIILTFIMIGSGLQVLDVINL----FGDKKDACKITKRREG 130
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
+ + G+ + ASPC+TP++A ++ ++A S + +IG +LL Y+ G+ ++LA +
Sbjct: 131 ILDVFFLGILSGILASPCATPIMAAIIAFIAASGNLVIGMIMLLMYSLGHSVLIILAGTS 190
Query: 298 AGALQSLL---SFRKFSSWINPMSGALLLGGGLYTF 330
G ++ + + +K + + G +++ GLY F
Sbjct: 191 FGLVEKIAYSENGKKIGRVLKNILGTIIILVGLYLF 226
>gi|241888933|ref|ZP_04776237.1| putative cytochrome c-type biogenesis protein [Gemella haemolysans
ATCC 10379]
gi|241864182|gb|EER68560.1| putative cytochrome c-type biogenesis protein [Gemella haemolysans
ATCC 10379]
Length = 242
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQI-------IGDSIAFSLGLA 172
+ ++F GL++ LSPC + +LP+ +G + R ++ + ++++F LG+
Sbjct: 12 KMILVFLEGLLSFLSPCVIPILPIYIGILAGKKEMNERGELVFNKRNTVTNTLSFVLGIC 71
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL-QLPSFFDNFDPRAA 231
+T +L SF + L + L I MGL L + ++ L F +
Sbjct: 72 STFFILAFATSFISIFLNENIKTLQTISGILIIFMGLLQLGVFKIGFLKQEFSIKNKVKR 131
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
N + + A+L G TF+ + +PC P+LA++ Y A+S ++ L+L+Y G++ P
Sbjct: 132 KGNKTTPILAFLMGFTFSFSWTPCIGPILASVFLY-ASSHTGIMSVLLILAYCLGFILPF 190
Query: 292 LLAASFAGALQSLLSFRK 309
+L A FA L L F+K
Sbjct: 191 ILVAFFASKLLEL--FKK 206
>gi|108759425|ref|YP_633155.1| thiol:disulfide interchange protein DsbD [Myxococcus xanthus DK
1622]
gi|108463305|gb|ABF88490.1| thiol:disulfide interchange protein DsbD [Myxococcus xanthus DK
1622]
Length = 506
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 109/219 (49%), Gaps = 14/219 (6%)
Query: 122 AVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGS-GKSRAQIIGDSIAFSLGLATTLALLGV 180
AV+F GL+T+L+PC ++P+T+ GA + G+ RA ++ S + +G+ + LGV
Sbjct: 74 AVVFAGGLLTALTPCVYPLIPITVSVFGARKTEGRGRALLLTSS--YIVGMGVVFSALGV 131
Query: 181 GASFAGKAYGQIGTGLPLAASGLAI---VMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
A+ G+A+G + G P +GLA+ ++ ++ EL LPS +F + A
Sbjct: 132 LAAKTGQAFGSM-LGHPAVVTGLAVFLLLLATSMFGAFELALPS---SFQTKLNAVGGAG 187
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
A+L G A+PC+ PVL LL +VA S + +G +LL Y G P L F
Sbjct: 188 VAGAFLMGSVSGFLAAPCTGPVLTGLLAFVAKSANTTLGASLLFVYALGIGVPFFLIGVF 247
Query: 298 AGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFP 336
L + W+ + G +L+ +++L FP
Sbjct: 248 T---VRLPRGGVWMEWVKSVLGIMLVALA-FSYLKDAFP 282
>gi|421893177|ref|ZP_16323732.1| Cytochrome c-type biogenesis protein CcdA homolog, associated with
MetSO reductase [Streptococcus pyogenes NS88.2]
gi|379981076|emb|CCG27454.1| Cytochrome c-type biogenesis protein CcdA homolog, associated with
MetSO reductase [Streptococcus pyogenes NS88.2]
Length = 236
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 96/198 (48%), Gaps = 25/198 (12%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGY---------IGAFGSGKSRAQIIGDSIA 166
LS + +FGAGL++ SPC VLP+ LG I FG I+ ++A
Sbjct: 3 LSLVLMVSVFGAGLLSFFSPCIFPVLPVYLGILLDADDSKTITIFGKKLYWYGIV-KTLA 61
Query: 167 FSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSF---- 222
F GL+T +LG GA F G + L A L I++G++ + +I ++ F
Sbjct: 62 FIFGLSTIFVILGYGAGFLGNILYAVWFRYLLGA--LVIILGIHQMGLITIKSLQFQKSL 119
Query: 223 -FDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKD-PLIGGTLL 280
F N R N A++ GLTF+ +PC PVL+++L VA+ + GG L+
Sbjct: 120 TFHNNKNRNGLFN------AFILGLTFSFGWTPCVGPVLSSVLALVASGGNGAWQGGVLM 173
Query: 281 LSYTTGYVAPLLLAASFA 298
+ YT G P LL SFA
Sbjct: 174 IIYTLGLGIPFLL-ISFA 190
>gi|375103772|ref|ZP_09750033.1| thiol:disulfide interchange protein [Burkholderiales bacterium
JOSHI_001]
gi|374664503|gb|EHR69288.1| thiol:disulfide interchange protein [Burkholderiales bacterium
JOSHI_001]
Length = 643
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 113/228 (49%), Gaps = 16/228 (7%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGK-SRAQIIGDSIAFSLGLATTLA 176
+T + F GL+ SL+PC L +LP+ I G+ + +R + ++++SLG+A
Sbjct: 222 WTVIGAFFVMGLLLSLTPCVLPMLPILSSVIVGSGAQQVTRGRSFALAVSYSLGMALVYT 281
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVM---GLNLLEIIELQLPSFFDNFDPRAAAA 233
LG+ A AG+ PL +G A+++ L++ ++ ELQLPS A+
Sbjct: 282 ALGIAAGLAGEGLAA-ALQHPLVLAGFAMLLFAFALSMFDVYELQLPSALATHL-HGASQ 339
Query: 234 NFPS--SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
P+ V +L G AL SPC T LA L +++ S+D ++GG+ L + G PL
Sbjct: 340 KLPAGQHVGVFLMGGVSALIVSPCVTAPLAGALLFLSQSRDVVLGGSALFAMAAGMSVPL 399
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLYTFLDRLFP 336
LL + AGA K +W++ + G LL+G ++ L P
Sbjct: 400 LLLGASAGAW-----LPKSGAWMHAVKRFFGLLLMGVAIWIVQPVLHP 442
>gi|440226598|ref|YP_007333689.1| cytochrome-c-type biogenesis protein [Rhizobium tropici CIAT 899]
gi|440038109|gb|AGB71143.1| cytochrome-c-type biogenesis protein [Rhizobium tropici CIAT 899]
Length = 250
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAF------GSGKSRAQ-------IIGDSIAFSLGLAT 173
AG ++ LSPC L ++P L Y+ G G + AQ ++ ++ F+LG AT
Sbjct: 14 AGALSFLSPCVLPLVPPYLCYMAGISVEQFRGGGVAVAQAPGIRGNVLMSALFFTLGFAT 73
Query: 174 TLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAA 233
LG GAS G Q L + ++MGLN L + + L + + R +
Sbjct: 74 VFIALGAGASSIGMLLRQHLDILAKIGGLIIVIMGLNFLGVFRIGLLAR----EARFQSG 129
Query: 234 NFPSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
P+++ AY+ GL FA +PC PVL +LG A+ + G LL Y+ G P
Sbjct: 130 GKPATLTGAYIMGLAFAFGWTPCIGPVLGAILGIAASRETVGAGAGLLAVYSLGLAIPFW 189
Query: 293 LAASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
+AA F+GA LS FR+ + + G LL+ GL
Sbjct: 190 IAAGFSGAFMRFLSRFRRHLGTVERIMGGLLVLTGL 225
>gi|192293324|ref|YP_001993929.1| cytochrome c biogenesis protein transmembrane protein
[Rhodopseudomonas palustris TIE-1]
gi|192287073|gb|ACF03454.1| cytochrome c biogenesis protein transmembrane region
[Rhodopseudomonas palustris TIE-1]
Length = 247
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 109/226 (48%), Gaps = 16/226 (7%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYI----------GAFGSGKS-RAQIIGDS 164
+S SL FGAG+++ LSPC L ++P L ++ GA K+ +++ S
Sbjct: 2 VSNISLVGAFGAGVLSFLSPCVLPLVPPYLCFLAGVSLDQLTRGADQPSKTVDGRVVAAS 61
Query: 165 IAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFD 224
+AF LG +T LG AS GKA L + A + IV+GL+ L + + L
Sbjct: 62 LAFVLGFSTVFVALGASASAIGKAVTDHFEALGIVAGVIIIVLGLHFLGLFRIGLLYREA 121
Query: 225 NFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYT 284
F + + AY+ GL FA +PC PVLAT+L G LL +Y+
Sbjct: 122 RFHNVSRGVGL---LGAYVVGLAFAFGWTPCVGPVLATILLVAGVEGSAAHGAVLLGAYS 178
Query: 285 TGYVAPLLLAASFAGALQSLLSFRK--FSSWINPMSGALLLGGGLY 328
G P LLA+ F+GA L++ + ++ M GAL+L G L+
Sbjct: 179 LGIGLPFLLASLFSGAFIRLMARLRAQMATVEKVMGGALVLTGVLF 224
>gi|417856534|ref|ZP_12501593.1| cytochrome c-type biogenesis protein ccdA [Streptococcus pyogenes
HKU QMH11M0907901]
gi|387933489|gb|EIK41602.1| cytochrome c-type biogenesis protein ccdA [Streptococcus pyogenes
HKU QMH11M0907901]
Length = 236
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 96/198 (48%), Gaps = 25/198 (12%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGY---------IGAFGSGKSRAQIIGDSIA 166
LS + +FGAGL++ SPC VLP+ LG I FG I+ ++A
Sbjct: 3 LSLVLMVSVFGAGLLSFFSPCIFPVLPVYLGILLDADDSKTITIFGKKLYWYGIV-KTLA 61
Query: 167 FSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSF---- 222
F GL+T +LG GA F G + L A L I++G++ + +I ++ F
Sbjct: 62 FIFGLSTIFVILGYGAGFLGNILYTVWFRYLLGA--LVIILGIHQMGLITIKSLQFQKSL 119
Query: 223 -FDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKD-PLIGGTLL 280
F N R N A++ GLTF+ +PC PVL+++L VA+ + GG L+
Sbjct: 120 TFHNNKNRNGLFN------AFILGLTFSFGWTPCVGPVLSSVLALVASGGNGAWQGGVLM 173
Query: 281 LSYTTGYVAPLLLAASFA 298
+ YT G P LL SFA
Sbjct: 174 IIYTLGLGIPFLL-ISFA 190
>gi|312127109|ref|YP_003991983.1| cytochrome c biogenesis protein transmembrane region
[Caldicellulosiruptor hydrothermalis 108]
gi|311777128|gb|ADQ06614.1| cytochrome c biogenesis protein transmembrane region
[Caldicellulosiruptor hydrothermalis 108]
Length = 215
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 11/210 (5%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAG 186
AG ++ SPC L ++P+ + Y+ F SR + +S+ F LG + +LGV A+ G
Sbjct: 11 AGFLSFFSPCILPLIPVYVLYL--FSQKGSRLK---NSLLFVLGFSIVFVVLGVLAAAVG 65
Query: 187 KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDN-FDPRAAAANFPSSVQAYLAG 245
+ L A+ + ++MGL +L++ P F F N + + G
Sbjct: 66 SVFSGYSFVLKKIAAIVIVLMGLVMLDLS----PDFLKRIFIHIQGKGNLDINASPLILG 121
Query: 246 LTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLL 305
+ +++ +PC PVL ++L A S+ L G LL Y+ G+ P L+++ L++
Sbjct: 122 MVLSISWTPCVGPVLTSILSMAALSETFLKGAMLLFIYSMGFAVPFLISSFLIDRLKAFF 181
Query: 306 -SFRKFSSWINPMSGALLLGGGLYTFLDRL 334
++S I +GALL+ G+ F D++
Sbjct: 182 GMLNRYSRAIEYFTGALLIAFGMLAFFDKI 211
>gi|405381123|ref|ZP_11034955.1| cytochrome c biogenesis protein [Rhizobium sp. CF142]
gi|397322445|gb|EJJ26851.1| cytochrome c biogenesis protein [Rhizobium sp. CF142]
Length = 249
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 95/214 (44%), Gaps = 16/214 (7%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAF------GSG------KSRAQIIGDSIAFSLGLATT 174
AG ++ LSPC L ++P L Y+ G G R ++ ++ F+LG AT
Sbjct: 14 AGALSFLSPCVLPLVPPYLCYMAGISVEQFRGGGTVAAAPDVRRGVLFSALFFTLGFATV 73
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
LG GAS G Q L + IVMGLN L + + L + F A
Sbjct: 74 FVALGAGASTIGMVLRQHLDLLSKIGGLIIIVMGLNFLGLFRIGLLAREARFQGNGKPAT 133
Query: 235 FPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
AY+ GL FA +PC PVL +LG A+ + G LL Y+ G P +A
Sbjct: 134 LTG---AYIMGLAFAFGWTPCIGPVLGAILGVAASRETVGSGAGLLAVYSLGLAVPFWIA 190
Query: 295 ASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
A F+GA LS FR+ + + G L+ GL
Sbjct: 191 AGFSGAFMRFLSRFRRHLGTVEKIMGVFLVLTGL 224
>gi|71903950|ref|YP_280753.1| cytochrome c-type biogenesis protein [Streptococcus pyogenes
MGAS6180]
gi|71803045|gb|AAX72398.1| cytochrome c-type biogenesis protein [Streptococcus pyogenes
MGAS6180]
Length = 236
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 96/198 (48%), Gaps = 25/198 (12%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGY---------IGAFGSGKSRAQIIGDSIA 166
LS + +FGAGL++ SPC VLP+ LG I FG I+ ++A
Sbjct: 3 LSLVLMVSVFGAGLLSFFSPCIFPVLPVYLGILLDADDSKTITIFGKKLYWYGIV-KTLA 61
Query: 167 FSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSF---- 222
F GL+T +LG GA F G + L A L I++G++ + +I ++ F
Sbjct: 62 FIFGLSTIFVILGYGAGFLGNILYAVWFRYLLGA--LVIILGIHQMGLITIKSLQFQKSL 119
Query: 223 -FDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKD-PLIGGTLL 280
F N R N A++ GLTF+ +PC PVL+++L VA+ + GG L+
Sbjct: 120 TFHNNKNRNGLFN------AFILGLTFSFGWTPCVGPVLSSVLALVASGGNGAWQGGVLM 173
Query: 281 LSYTTGYVAPLLLAASFA 298
+ YT G P LL SFA
Sbjct: 174 IIYTLGLGIPFLL-ISFA 190
>gi|77164568|ref|YP_343093.1| cytochrome c biogenesis protein, transmembrane region
[Nitrosococcus oceani ATCC 19707]
gi|254433522|ref|ZP_05047030.1| Cytochrome C biogenesis protein transmembrane region [Nitrosococcus
oceani AFC27]
gi|76882882|gb|ABA57563.1| Cytochrome c biogenesis protein, transmembrane region
[Nitrosococcus oceani ATCC 19707]
gi|207089855|gb|EDZ67126.1| Cytochrome C biogenesis protein transmembrane region [Nitrosococcus
oceani AFC27]
Length = 626
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 109/230 (47%), Gaps = 12/230 (5%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLAL 177
+ +LA FG GL+ S +PC ++P+ G I G + + S+A+ L +A T +
Sbjct: 198 WLTLAAFFGFGLLLSFTPCVFPMIPILSGIIVGQGKNITTWRSFMLSLAYVLAMALTYTV 257
Query: 178 LGVGASFAGKAYGQI--GTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
G+ AS G+ G+ + AS + +++ L++ ++ +QLPS R +
Sbjct: 258 AGIVASLLGENLQATFQHPGILIGASLIFVLLALSMFDLYHIQLPSRLQTRLLRLSQKQK 317
Query: 236 PSSV-QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
++ A L GL AL PC P LA L Y+ S D L+GG+ L + + G PLL
Sbjct: 318 GGTLLGAGLMGLFSALIVGPCVAPPLAGALIYIGESGDALLGGSALFALSMGMGTPLLFL 377
Query: 295 ASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLYTFLDRLFPTTMAM 341
+ AG L SW+ P+ G LLL ++ L R+ P + M
Sbjct: 378 GASAGKL-----LPHVGSWMQPIKYLFGVLLLAVAIW-LLSRILPQAIIM 421
>gi|15675452|ref|NP_269626.1| cytochrome C-type biogenesis protein [Streptococcus pyogenes SF370]
gi|21910805|ref|NP_665073.1| cytochrome C-type biogenesis protein [Streptococcus pyogenes
MGAS315]
gi|28895506|ref|NP_801856.1| cytochrome C-type biogenesis protein [Streptococcus pyogenes SSI-1]
gi|71911097|ref|YP_282647.1| cytochrome C biogenesis protein [Streptococcus pyogenes MGAS5005]
gi|306826997|ref|ZP_07460295.1| cytochrome c-type biogenesis protein CcdA [Streptococcus pyogenes
ATCC 10782]
gi|386363085|ref|YP_006072416.1| cytochrome C biogenesis transmembrane region family protein
[Streptococcus pyogenes Alab49]
gi|410680949|ref|YP_006933351.1| cytochrome C biogenesis transmembrane region family protein
[Streptococcus pyogenes A20]
gi|13622643|gb|AAK34347.1| putative cytochrome C-type biogenesis protein [Streptococcus
pyogenes M1 GAS]
gi|21905009|gb|AAM79876.1| putative cytochrome C-type biogenesis protein [Streptococcus
pyogenes MGAS315]
gi|28810755|dbj|BAC63689.1| putative cytochrome C-type biogenesis protein [Streptococcus
pyogenes SSI-1]
gi|71853879|gb|AAZ51902.1| cytochrome c-type biogenesis protein [Streptococcus pyogenes
MGAS5005]
gi|94544381|gb|ABF34429.1| Cytochrome c-type biogenesis protein ccdA [Streptococcus pyogenes
MGAS10270]
gi|304430743|gb|EFM33754.1| cytochrome c-type biogenesis protein CcdA [Streptococcus pyogenes
ATCC 10782]
gi|350277494|gb|AEQ24862.1| cytochrome C biogenesis transmembrane region family protein
[Streptococcus pyogenes Alab49]
gi|395454340|dbj|BAM30679.1| cytochrome C biogenesis protein [Streptococcus pyogenes M1 476]
gi|409693538|gb|AFV38398.1| cytochrome C biogenesis transmembrane region family protein
[Streptococcus pyogenes A20]
Length = 236
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 96/198 (48%), Gaps = 25/198 (12%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGY---------IGAFGSGKSRAQIIGDSIA 166
LS + +FGAGL++ SPC VLP+ LG I FG I+ ++A
Sbjct: 3 LSLVLMVSVFGAGLLSFFSPCIFPVLPVYLGILLDADDSKTITIFGKKLYWYGIV-KTLA 61
Query: 167 FSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSF---- 222
F GL+T +LG GA F G + L A L I++G++ + +I ++ F
Sbjct: 62 FIFGLSTIFVILGYGAGFLGNILYAVWFRYLLGA--LVIILGIHQMGLITIKSLQFQKSL 119
Query: 223 -FDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKD-PLIGGTLL 280
F N R N A++ GLTF+ +PC PVL+++L VA+ + GG L+
Sbjct: 120 TFHNNKNRNGLFN------AFILGLTFSFGWTPCVGPVLSSVLALVASGGNGAWQGGVLM 173
Query: 281 LSYTTGYVAPLLLAASFA 298
+ YT G P LL SFA
Sbjct: 174 IIYTLGLGIPFLL-ISFA 190
>gi|387816487|ref|YP_005676831.1| cytochrome c-type biogenesis protein CcdA (DsbD analog)
[Clostridium botulinum H04402 065]
gi|322804528|emb|CBZ02079.1| cytochrome c-type biogenesis protein CcdA (DsbD analog)
[Clostridium botulinum H04402 065]
Length = 227
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSG-------KSRAQIIGDSIAFSLGLATTL 175
++F G++T +SPC L ++P+ Y+ F G K+RA I SIAF G
Sbjct: 5 LLFLEGIITFISPCILPMIPI---YVSYFAGGDIDNKNYKNRALI--SSIAFVAGFTFVF 59
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LLGV A G + + + + + ++ GLN L II + L +F +
Sbjct: 60 TLLGVAAGTVGVIFNTYMREINIVSGSIMVIFGLNYLGIINVGL--LHRSFKINKPTGHK 117
Query: 236 PSSVQAY-LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
SS+ + L G+ F +PC P L + L + S + +G ++L+ Y+ G P +L+
Sbjct: 118 KSSIMSTALFGMIFGFGWTPCVGPFLGSALMIASNSTNVFMGASMLMIYSLGLGIPFILS 177
Query: 295 ASFAGALQSLLSF-RKFSSWINPMSGALLL 323
A +L++ F ++ IN +SG LL+
Sbjct: 178 ALLIDSLKTTFEFIKRNYKIINRISGGLLI 207
>gi|86158568|ref|YP_465353.1| cytochrome c biogenesis protein [Anaeromyxobacter dehalogenans
2CP-C]
gi|85775079|gb|ABC81916.1| cytochrome c biogenesis protein [Anaeromyxobacter dehalogenans
2CP-C]
Length = 402
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 115/221 (52%), Gaps = 12/221 (5%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIG-----AFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+FGAG++T SPC L ++P+ L +G A G+ ++ +IAFSLGLA L
Sbjct: 8 LFGAGILTFASPCVLPLVPVYLSLLGGASVDALRRGERPRGLVPSAIAFSLGLAAVFVAL 67
Query: 179 GVGASFAGKAYGQIGTGLPLAASG-LAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
G GAS AG+A L LA SG L + +GL +L + L+LP+ P A
Sbjct: 68 GAGASAAGEALSAHRDAL-LAVSGALVVALGLKVLGV--LRLPALDVERRPWLARVRPGG 124
Query: 238 SVQAYLA-GLTFALAASPCSTPVLATLLGYVATS-KDPLIGGTLLLSYTTGYVAPLLLAA 295
S+ A A G FAL +PC PVL ++L + A++ P G L +Y G V PL+L A
Sbjct: 125 SLAASFAFGGAFALGWTPCVGPVLGSVLTWTASAGASPARGALYLGTYAAGLVTPLVLTA 184
Query: 296 SFAG-ALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLF 335
FAG AL L ++ + +G LL+G G+ DRL
Sbjct: 185 VFAGRALGWLDRLKRQLPRLEKATGLLLVGAGILLASDRLM 225
>gi|303235031|ref|ZP_07321655.1| cytochrome C biogenesis protein transmembrane region [Finegoldia
magna BVS033A4]
gi|302493886|gb|EFL53668.1| cytochrome C biogenesis protein transmembrane region [Finegoldia
magna BVS033A4]
Length = 227
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 18/208 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAG 186
AG++TS PC+L ++P+ +GY+ G+ R + ++ FSLG + G+ A+ G
Sbjct: 26 AGILTSFLPCSLPMIPIIIGYLS--GNNYDRKKSFKVALVFSLGSILVFTIFGLTAALVG 83
Query: 187 KAYGQIGTGLPLAASGLAIVMGL---NLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYL 243
K Q + L I+M ++++II L +++ + A+L
Sbjct: 84 KILNQFSRVFYIIIGILLILMAFQNWHVIKIISLN----------KSSKITKTGLLGAFL 133
Query: 244 AGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQS 303
AG+ A+ ASPCSTPVL +L+ A +++ L L + Y G + ++A G ++
Sbjct: 134 AGVIQAVFASPCSTPVLVSLMAIAANTRNILFSIVLFVFYGIGNCFLVFMSALLMGKVEE 193
Query: 304 LL---SFRKFSSWINPMSGALLLGGGLY 328
++ S+ K S I + GA+L+ GLY
Sbjct: 194 IIQNDSYTKVSKIIEIVLGAVLMLFGLY 221
>gi|395778080|ref|ZP_10458593.1| hypothetical protein MCU_00294 [Bartonella elizabethae Re6043vi]
gi|423715661|ref|ZP_17689885.1| hypothetical protein MEE_01086 [Bartonella elizabethae F9251]
gi|395418389|gb|EJF84716.1| hypothetical protein MCU_00294 [Bartonella elizabethae Re6043vi]
gi|395429788|gb|EJF95849.1| hypothetical protein MEE_01086 [Bartonella elizabethae F9251]
Length = 268
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 102/233 (43%), Gaps = 23/233 (9%)
Query: 108 AVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ-------- 159
VL ++S +S +F AG ++ LSPC L ++P L Y+ G R++
Sbjct: 6 CVLIEISTIS------VFFAGALSFLSPCVLPLVPPYLCYMAGIGIDDFRSEKRDEKVFI 59
Query: 160 ---IIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIE 216
++ IAF LG T LG AS GK G LAA + I+ GLN L + +
Sbjct: 60 RWALLSSVIAFVLGFTTVFVALGASASTIGKFIGYYRDWFALAAGVIIIIFGLNFLGLFK 119
Query: 217 LQLPSFFDNFDPRAAAANFPS-SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLI 275
+ F + R P+ + AY+ GL FA +PC P+L ++ T +
Sbjct: 120 IS----FLFREARFQTHKTPAGPLGAYVIGLAFAFGWTPCIGPILGPIITLAGTKETVGE 175
Query: 276 GGTLLLSYTTGYVAPLLLAASFAGALQSLL-SFRKFSSWINPMSGALLLGGGL 327
G LL Y G P +LAA F+ L +FR + + G L+ G+
Sbjct: 176 GAILLAVYALGLAVPFVLAALFSSHFMRFLAAFRIHLGKVEKIIGVFLILTGI 228
>gi|422316140|ref|ZP_16397541.1| hypothetical protein FPOG_01071, partial [Fusobacterium
periodonticum D10]
gi|404591470|gb|EKA93612.1| hypothetical protein FPOG_01071, partial [Fusobacterium
periodonticum D10]
Length = 217
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 107/213 (50%), Gaps = 19/213 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAG 186
AG+ + SPC ++P+ YI +G+ ++ + ++AF LGL+ T +LG GA F G
Sbjct: 13 AGIASFFSPCIFPIIPV---YISILSNGEKKS--VSKTLAFVLGLSVTYIVLGFGAGFIG 67
Query: 187 KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQA----Y 242
+ + + + + + L +++GL ++I++L+ F + N+ Q+ +
Sbjct: 68 ELF--LNSKVRVIGGILVVILGLFQMDILKLK-------FLEKTKVMNYEGEEQSLFSTF 118
Query: 243 LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQ 302
L GLTF+L +PC P+LA++L +S D L++ Y G P ++ + + L
Sbjct: 119 LLGLTFSLGWTPCVGPILASILILAGSSGDTGNSVMLMVLYLLGMATPFVIFSLASKTLF 178
Query: 303 SLLSF-RKFSSWINPMSGALLLGGGLYTFLDRL 334
+SF +K I + G L++ G D+L
Sbjct: 179 KKMSFIKKHLPLIKKIGGFLIIVMGFLLIFDKL 211
>gi|168213463|ref|ZP_02639088.1| membrane protein [Clostridium perfringens CPE str. F4969]
gi|170715039|gb|EDT27221.1| membrane protein [Clostridium perfringens CPE str. F4969]
Length = 230
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 111/216 (51%), Gaps = 8/216 (3%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLAL 177
F ++ + F AG+V S SPCTLS +PL +GY+ K + S+ FS+GL T +
Sbjct: 16 FLAIILSFFAGVVASFSPCTLSSIPLLIGYVQG-SEVKDNKKAFKCSLIFSIGLGITFTV 74
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
+G+ + GKA+ G + + + I GL +L++I L F D D
Sbjct: 75 IGLLTALIGKAFLGAGKFWYIILAFIMIGSGLQVLDVINL----FGDKKDACKITKRREG 130
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
+ + G+ + ASPC+TP++A ++ ++A S + +IG +LL Y+ G+ ++LA +
Sbjct: 131 ILDVFFLGILSGILASPCATPIMAAIIAFIAASGNLVIGMIMLLMYSLGHSVLIILAGTS 190
Query: 298 AGALQSLL---SFRKFSSWINPMSGALLLGGGLYTF 330
G ++ + +K + + G +++ GLY F
Sbjct: 191 FGLVEKIAYSEKGKKIGRVLKNILGTIIILVGLYLF 226
>gi|118591653|ref|ZP_01549049.1| Cytochrome c biogenesis protein, transmembrane region [Stappia
aggregata IAM 12614]
gi|118435646|gb|EAV42291.1| Cytochrome c biogenesis protein, transmembrane region [Stappia
aggregata IAM 12614]
Length = 244
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 15/202 (7%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYI---------GAFGSGKSRAQIIGDSIAFSL 169
SL F AGL++ +SPC L ++P L Y+ G + ++ ++I +IAF L
Sbjct: 4 VSLGAAFLAGLLSFISPCVLPIVPPYLCYLAGVSVDELKGETATAETGRRVILAAIAFVL 63
Query: 170 GLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR 229
G + LG AS G++ + L A + IVMGL+ L + + L F + R
Sbjct: 64 GFSLVFVALGATASVIGQSIARYYDILSYVAGAIIIVMGLHFLGVFRIGL--LFR--EAR 119
Query: 230 AAAANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYV 288
P+ V A++ GL FA +PC PVLA +L +S G LL Y G
Sbjct: 120 IHVERKPAGLVGAFVMGLAFAFGWTPCVGPVLAAILFVAGSSDTTWHGAGLLAVYALGIG 179
Query: 289 APLLLAASFAGALQSLL-SFRK 309
P +LAA+FA L FRK
Sbjct: 180 LPFILAAAFASRFLKLAGRFRK 201
>gi|94988908|ref|YP_597009.1| cytochrome c-type biogenesis protein [Streptococcus pyogenes
MGAS9429]
gi|94992800|ref|YP_600899.1| cytochrome c-type biogenesis protein ccdA [Streptococcus pyogenes
MGAS2096]
gi|94542416|gb|ABF32465.1| cytochrome c-type biogenesis protein [Streptococcus pyogenes
MGAS9429]
gi|94546308|gb|ABF36355.1| Cytochrome c-type biogenesis protein ccdA [Streptococcus pyogenes
MGAS2096]
Length = 236
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 96/198 (48%), Gaps = 25/198 (12%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGY---------IGAFGSGKSRAQIIGDSIA 166
LS + +FGAGL++ SPC VLP+ LG I FG I+ ++A
Sbjct: 3 LSLVLMVSVFGAGLLSFFSPCIFPVLPVYLGILLDADDSKTITIFGKKLYWYGIV-KTLA 61
Query: 167 FSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSF---- 222
F GL+T +LG GA F G + L A L I++G++ + +I ++ F
Sbjct: 62 FIFGLSTIFVILGYGAGFLGNILYAVWFRYLLGA--LVIILGIHQMGLITIKSLQFQKSL 119
Query: 223 -FDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKD-PLIGGTLL 280
F N R N A++ GLTF+ +PC PVL+++L VA+ + GG L+
Sbjct: 120 TFHNNKNRNGLFN------AFILGLTFSFGWTPCVGPVLSSVLALVASGGNGAWQGGVLM 173
Query: 281 LSYTTGYVAPLLLAASFA 298
+ YT G P LL SFA
Sbjct: 174 IIYTLGLGIPFLL-ISFA 190
>gi|414163242|ref|ZP_11419489.1| hypothetical protein HMPREF9697_01390 [Afipia felis ATCC 53690]
gi|410881022|gb|EKS28862.1| hypothetical protein HMPREF9697_01390 [Afipia felis ATCC 53690]
Length = 243
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 16/206 (7%)
Query: 133 LSPCTLSVLPLTLGYIGAFG--------SGKSRAQIIGDSIAFSLGLATTLALLGVGASF 184
+SPC L ++P ++ + +S+ ++ +IAF LG T G AS
Sbjct: 18 ISPCVLPIVPPYFAWMAGVSFDDLRDGRTERSQLRLAAIAIAFVLGFTTVFVAFGATASL 77
Query: 185 AGKAYGQIGTGLPLAASGLAIVMGLNLLEI--IELQLPSFFDNFDPRAAAANFPSSVQAY 242
GK Q L + A + IVMGL+ L + IE N D + A + AY
Sbjct: 78 IGKTVAQYFDTLSVIAGLIIIVMGLHFLGLFRIEFLYRQLRMNVDRKPAGL-----LGAY 132
Query: 243 LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQ 302
+ GL FA +PC P+LA +L +++ + G LL +Y+ G P +LAA F G
Sbjct: 133 IVGLAFAFGWTPCVGPILAAILLIASSAGSAMHGALLLTAYSLGIGIPFILAAIFMGRFM 192
Query: 303 SLLS-FRKFSSWINPMSGALLLGGGL 327
L S F+ + ++G LL+ G+
Sbjct: 193 HLFSRFKMHLDKVEKIAGGLLVLTGI 218
>gi|83954658|ref|ZP_00963369.1| sulfur oxidation V protein [Sulfitobacter sp. NAS-14.1]
gi|83840942|gb|EAP80113.1| sulfur oxidation V protein [Sulfitobacter sp. NAS-14.1]
Length = 246
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 98/212 (46%), Gaps = 13/212 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGK----------SRAQIIGDSIAFSLGLATTLA 176
AGL++ LSPC L ++P L Y+ G + R + + ++ F+ G+ T
Sbjct: 12 AGLLSFLSPCILPIVPFYLSYLAGVGMNQITADGPVDAAVRRRAVIAALFFAAGVITIFV 71
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
LG A+ G+ L A+ + I MGL+ L +I + + F A
Sbjct: 72 GLGAVATTFGQIVRDYFDILRWVAAAVIIAMGLHFLGVIRIGF--LYRQFRADAGNTTAT 129
Query: 237 SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
S + AY+ GL FA +PC PVLA +L A ++ G LLL+Y G AP +LAA
Sbjct: 130 SFLGAYVIGLAFAFGWTPCVGPVLAAILFTAAGAETAGSGALLLLTYGLGMTAPFVLAAL 189
Query: 297 FAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
F G ++ FR+ + G LL+ GL
Sbjct: 190 FIGPFMRWMAGFRQHLGTVEKAMGVLLIVFGL 221
>gi|253576291|ref|ZP_04853621.1| cytochrome c biogenesis protein transmembrane region [Paenibacillus
sp. oral taxon 786 str. D14]
gi|251844184|gb|EES72202.1| cytochrome c biogenesis protein transmembrane region [Paenibacillus
sp. oral taxon 786 str. D14]
Length = 237
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 110/232 (47%), Gaps = 21/232 (9%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGK---------SRAQIIGDSIAFSLGL 171
L + FGAG+ + +SPC L + P L YI + R + + ++AF LG
Sbjct: 6 LGIAFGAGVASFISPCCLPLYPSYLSYITGMSVQQLKTEQSKRDVRFRTMTHTLAFILGF 65
Query: 172 ATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAA 231
+ LG GA G+ + Q + ++ L I MGL L+ I + P F R
Sbjct: 66 SVVFYTLGFGAGLFGEFFNQYRGLIRQLSAILIICMGLFLMGIFQ---PQFL--LKERKM 120
Query: 232 AANFPSS--VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVA 289
F + + +++ G+ F+ SPC P+LA ++ T IG L+ +YT G+
Sbjct: 121 NLKFKPAGYIGSFIFGIGFSAGWSPCVGPILAAIIALAVTEPGTWIG--LITAYTLGFAL 178
Query: 290 PLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFPTTMAM 341
P + A F G+ + +L ++S+ + + GAL+L G+ F +R+ T+ +
Sbjct: 179 PFFVLAFFIGSTKWIL---RYSAIMMKIGGALMLLMGVLLFTNRMAQITIWL 227
>gi|340754207|ref|ZP_08690969.1| cytochrome c-type biogenesis protein ccdA [Fusobacterium sp.
2_1_31]
gi|340566561|gb|EEO38779.2| cytochrome c-type biogenesis protein ccdA [Fusobacterium sp.
2_1_31]
Length = 225
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 107/213 (50%), Gaps = 19/213 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAG 186
AG+ + SPC ++P+ YI +G+ ++ + ++AF LGL+ T +LG GA F G
Sbjct: 21 AGIASFFSPCIFPIIPV---YISILSNGEKKS--VSKTLAFVLGLSVTYIVLGFGAGFIG 75
Query: 187 KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQA----Y 242
+ + + + + + L +++GL ++I++L+ F + N+ Q+ +
Sbjct: 76 ELF--LNSKVRVIGGILVVILGLFQMDILKLK-------FLEKTKVMNYEGEEQSLFSTF 126
Query: 243 LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQ 302
L GLTF+L +PC P+LA++L +S D L++ Y G P ++ + + L
Sbjct: 127 LLGLTFSLGWTPCVGPILASILILAGSSGDTGNSVMLMVLYLLGMATPFVIFSLASKTLF 186
Query: 303 SLLSF-RKFSSWINPMSGALLLGGGLYTFLDRL 334
+SF +K I + G L++ G D+L
Sbjct: 187 KKMSFIKKHLPLIKKIGGFLIIVMGFLLIFDKL 219
>gi|366166482|ref|ZP_09466237.1| cytochrome c biogenesis protein [Acetivibrio cellulolyticus CD2]
Length = 233
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 106/211 (50%), Gaps = 13/211 (6%)
Query: 103 QQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIG 162
Q EA+ +SA + + + AG++TS +PC L+ +PL +GY+G G ++
Sbjct: 6 NQWLEALSAAISANIWLAPLLALLAGILTSFTPCALTSVPLVIGYVGGTGQRDTKRAFCL 65
Query: 163 DSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSF 222
++ FS+G+A T +LG AS G+ G+ + L I+M L EI
Sbjct: 66 SAV-FSIGMAVTFTILGTAASLLGRLMQGTGSWWYILLGILMILMALQTWEI-------- 116
Query: 223 FDNFDPRAAAANFPSS---VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTL 279
NF P + A + + + A+LAG+ L +SPC+TPVL LL VA L G L
Sbjct: 117 -YNFIPASYAISKNTKRGFLGAFLAGVLGGLFSSPCATPVLIVLLAMVAKEGSLLWGILL 175
Query: 280 LLSYTTGYVAPLLLAASFAGALQSLLSFRKF 310
L+ Y+ G+ +++A + G + L S K+
Sbjct: 176 LMLYSIGHSFLVMIAGTSVGFVHKLSSSEKY 206
>gi|126726398|ref|ZP_01742239.1| cytochrome c-type biogenesis protein CcdA [Rhodobacterales
bacterium HTCC2150]
gi|126704261|gb|EBA03353.1| cytochrome c-type biogenesis protein CcdA [Rhodobacteraceae
bacterium HTCC2150]
Length = 249
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 101/217 (46%), Gaps = 18/217 (8%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGA-----FGSGKSRAQIIGDSIAFSLGLATTL 175
L +FG GL++ LSPC L ++P L YI G+ + ++ F LGL+T
Sbjct: 16 LLAVFG-GLISFLSPCVLPIVPSYLAYISGTTLADLTDGEKPNSAVMPAVFFVLGLSTVF 74
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LLG ASF G+ Y Q T L A + +V GL+ + II + F R A +
Sbjct: 75 MLLGFTASFLGQLYLQNQTILTQIAGVVIVVFGLHFIGIIRIP-------FLYREARVDV 127
Query: 236 P----SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
S+ AY+ GL FA +PC P+L+ +L A G +L Y G P
Sbjct: 128 NTKGGSAFGAYILGLAFAFGWTPCLGPILSAILAMAADQGSTARGTMMLAFYAIGLGIPF 187
Query: 292 LLAASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
LL+A F L++ ++ I + GALL+ GL
Sbjct: 188 LLSAIFLSRSMVLMTRIKRHMVLIERIMGALLVVVGL 224
>gi|417926437|ref|ZP_12569836.1| cytochrome C biogenesis protein transmembrane region [Finegoldia
magna SY403409CC001050417]
gi|341589287|gb|EGS32569.1| cytochrome C biogenesis protein transmembrane region [Finegoldia
magna SY403409CC001050417]
Length = 227
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 109/220 (49%), Gaps = 20/220 (9%)
Query: 117 SFTSLAVIFG--AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATT 174
+ LA IF AG++TS PC+L ++P+ +GY+ G+ R + ++ FSLG
Sbjct: 14 DYVYLAPIFSLVAGILTSFLPCSLPMIPIIIGYLS--GNNYDRKKSFKVALVFSLGSILV 71
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGL---NLLEIIELQLPSFFDNFDPRAA 231
+ G+ A+ GK Q + L I+M ++++II L +++
Sbjct: 72 FTIFGLTAALVGKILNQFSRVFYIIIGILLILMAFQNWHVIKIISLN----------KSS 121
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
+ A++AG+ A+ ASPCSTPVL +L+ A +++ L L + Y G +
Sbjct: 122 KITKTGLLGAFIAGVIQAVFASPCSTPVLVSLMAIAANTRNILFSIVLFVFYGIGNCFLV 181
Query: 292 LLAASFAGALQSLL---SFRKFSSWINPMSGALLLGGGLY 328
++A G ++ ++ S+ K S I + GA+L+ GLY
Sbjct: 182 FMSALVMGKVEEIIQNDSYTKVSKIIEIVLGAVLMLFGLY 221
>gi|139473425|ref|YP_001128141.1| cytochrome c-type biogenesis protein [Streptococcus pyogenes str.
Manfredo]
gi|134271672|emb|CAM29905.1| putative cytochrome c-type biogenesis protein [Streptococcus
pyogenes str. Manfredo]
Length = 236
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 96/198 (48%), Gaps = 25/198 (12%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGY---------IGAFGSGKSRAQIIGDSIA 166
LS + +FGAGL++ SPC VLP+ LG I FG I+ ++A
Sbjct: 3 LSLVLMVSVFGAGLLSFFSPCIFPVLPVYLGILLDADDSKTITIFGKKLYWYGIV-KTLA 61
Query: 167 FSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSF---- 222
F GL+T +LG GA F G + L A L I++G++ + +I ++ F
Sbjct: 62 FIFGLSTIFVILGYGAGFLGNILYAVWFRYLLGA--LVIILGIHQMGLITIKSLQFQKSL 119
Query: 223 -FDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKD-PLIGGTLL 280
F N R N A++ GLTF+ +PC PVL+++L VA+ + GG L+
Sbjct: 120 TFHNDKNRNGLLN------AFILGLTFSFGWTPCVGPVLSSVLALVASGGNGAWQGGLLM 173
Query: 281 LSYTTGYVAPLLLAASFA 298
+ YT G P LL SFA
Sbjct: 174 IVYTLGLGIPFLL-LSFA 190
>gi|110800385|ref|YP_697225.1| membrane protein [Clostridium perfringens ATCC 13124]
gi|168205799|ref|ZP_02631804.1| membrane protein [Clostridium perfringens E str. JGS1987]
gi|168209777|ref|ZP_02635402.1| membrane protein [Clostridium perfringens B str. ATCC 3626]
gi|168217656|ref|ZP_02643281.1| membrane protein [Clostridium perfringens NCTC 8239]
gi|182624286|ref|ZP_02952071.1| membrane protein [Clostridium perfringens D str. JGS1721]
gi|110675032|gb|ABG84019.1| membrane protein [Clostridium perfringens ATCC 13124]
gi|170662658|gb|EDT15341.1| membrane protein [Clostridium perfringens E str. JGS1987]
gi|170712165|gb|EDT24347.1| membrane protein [Clostridium perfringens B str. ATCC 3626]
gi|177910504|gb|EDT72877.1| membrane protein [Clostridium perfringens D str. JGS1721]
gi|182380311|gb|EDT77790.1| membrane protein [Clostridium perfringens NCTC 8239]
Length = 230
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 113/216 (52%), Gaps = 8/216 (3%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLAL 177
F ++ + F AG+V S SPCTLS +PL +GY+ K + S+ FS+GL T +
Sbjct: 16 FLAIILSFFAGVVASFSPCTLSSIPLLIGYVQG-SEVKDNKKAFKYSLIFSIGLGITFTV 74
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
+G+ + GKA+ G + + + I GL +L++I L F D +
Sbjct: 75 IGLLTALIGKAFLGAGKFWYIILAFIMIGSGLQVLDVINL----FGDKKEACKITKRREG 130
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
+ A+ G+ + ASPC+TP++A ++ ++A S + +IG +LL Y+ G+ ++LA +
Sbjct: 131 ILDAFFLGILSGILASPCATPIMAAIIAFIAASGNLVIGMIMLLMYSLGHSVLIILAGTS 190
Query: 298 AGALQSLL---SFRKFSSWINPMSGALLLGGGLYTF 330
G ++ + + +K + + G +++ GLY F
Sbjct: 191 FGLVEKIAYSENGKKIGRVLKNILGTIIILVGLYLF 226
>gi|218289718|ref|ZP_03493926.1| cytochrome c biogenesis protein transmembrane region
[Alicyclobacillus acidocaldarius LAA1]
gi|218240175|gb|EED07359.1| cytochrome c biogenesis protein transmembrane region
[Alicyclobacillus acidocaldarius LAA1]
Length = 236
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 104/211 (49%), Gaps = 20/211 (9%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFG---------SGKSRAQIIGDSIAFSLGLATTL 175
F AGLV+ SPC L + P L Y+ + ++R ++ ++ F LG +
Sbjct: 9 FVAGLVSFFSPCVLPLYPSYLSYLSGVSLRPVDEQLLTWQARIRVFSHALFFVLGFSVIF 68
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LG+ AS G+A+ Q + +A L I MGL L +++ PS +
Sbjct: 69 FALGLSASALGRAFIQYRGIIRVAGGFLVIGMGLVLAGVVK---PSLLMREWKLHGHSRR 125
Query: 236 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
S + ++L GLTFA +PC P+L+++L V T+ +G L+ +Y G+ P L
Sbjct: 126 VSYLGSFLVGLTFAAGWTPCIGPILSSVL--VLTATHAALGLPLIAAYVIGFSIPFL--- 180
Query: 296 SFAGALQSLLSFR---KFSSWINPMSGALLL 323
+ AGA SL R ++S WI+ +SG LL+
Sbjct: 181 AIAGAFASLGRLRGMTRYSVWISRVSGYLLV 211
>gi|251778766|ref|ZP_04821686.1| cytochrome C biogenesis protein transmembrane region family
[Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243083081|gb|EES48971.1| cytochrome C biogenesis protein transmembrane region family
[Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 433
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 110/234 (47%), Gaps = 24/234 (10%)
Query: 113 LSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS--------RAQIIGDS 164
++++S S ++F G+V+ LSPC L ++PL +GY+ ++ R +++ +
Sbjct: 5 ITSVSNVSYLLVFFEGIVSFLSPCVLPLIPLYIGYLAGNAKKQNNDGTYTYERKKVLFHT 64
Query: 165 IAFSLGLATTLALLGVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPS 221
I F LG++T +LG+ + G I T + + + + + E LQ
Sbjct: 65 IFFVLGISTAFFILGISFTTIGTFLNNNKMIFTKISGIIIIILGLFQMGIFEFKFLQ--- 121
Query: 222 FFDNFDPRAAAANFP----SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
R N + + AY+ G TF+ A +PC P L+++L +++KD IG
Sbjct: 122 -----RERKLKINLNGKKVNPLIAYIMGFTFSFAWTPCVGPALSSVLILASSAKDAAIGN 176
Query: 278 TLLLSYTTGYVAPLLLAASF-AGALQSLLSFRKFSSWINPMSGALLLGGGLYTF 330
L+L Y G+V P L+ F AL + + + + + G L++ G+ TF
Sbjct: 177 LLVLIYCLGFVIPFLILGLFTTQALNFIKNNKNVMKYTIKIGGVLMIIMGVMTF 230
>gi|258512555|ref|YP_003185989.1| cytochrome c biogenesis protein transmembrane region
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|257479281|gb|ACV59600.1| cytochrome c biogenesis protein transmembrane region
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
Length = 236
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFG---------SGKSRAQIIGDSIAFSLGLATTL 175
F AGLV+ SPC L + P L Y+ + ++R ++ ++ F LG +
Sbjct: 9 FVAGLVSFFSPCVLPLYPSYLSYLSGVSLRPADEQLLTWQARIRVFSHALFFVLGFSVIF 68
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LG+ AS G+A+ Q L +A L I MGL L +++ PS +
Sbjct: 69 FALGLSASALGRAFIQYRGILRVAGGFLVIGMGLVLAGVVK---PSLLMREWKLHGHSRR 125
Query: 236 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
S + +L GLTFA +PC P+L+++L V T+ +G L+ +Y G+ P L
Sbjct: 126 VSYLGLFLVGLTFAAGWTPCIGPILSSVL--VLTATHAALGLPLIAAYVIGFSIPFL--- 180
Query: 296 SFAGALQSLLSFR---KFSSWINPMSGALLL 323
+ AGA SL R ++S WI+ +SG LL+
Sbjct: 181 AIAGAFASLGRLRGMARYSVWISRVSGYLLV 211
>gi|254500357|ref|ZP_05112508.1| Cytochrome C biogenesis protein transmembrane region [Labrenzia
alexandrii DFL-11]
gi|222436428|gb|EEE43107.1| Cytochrome C biogenesis protein transmembrane region [Labrenzia
alexandrii DFL-11]
Length = 244
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 98/210 (46%), Gaps = 15/210 (7%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYI---------GAFGSGKSRAQIIGDSIAFSLGLATTL 175
F AGL++ +SPC L ++P L Y+ G + + +++ +IAF LG +
Sbjct: 10 FLAGLLSFVSPCVLPIVPPYLCYLAGVSVDELKGNTAAATTGRRVVFAAIAFVLGFSAVF 69
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LG AS G++ + L A + I+MGL+ L I + L F + R
Sbjct: 70 VALGATASVIGQSIARYYDILSYIAGTIIIIMGLHFLGIFRIGL--LFR--EARVHVEKK 125
Query: 236 PSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
P+ V A++ GL FA +PC PVLA +L +S+ G LL Y G P +LA
Sbjct: 126 PAGLVGAFIMGLAFAFGWTPCVGPVLAAILFVAGSSETTWHGAGLLAVYALGIGIPFILA 185
Query: 295 ASFAGALQSLLS-FRKFSSWINPMSGALLL 323
A+FA S FRK I + G L+
Sbjct: 186 AAFASQFLGWASRFRKHMGIIEKIMGGFLV 215
>gi|209549242|ref|YP_002281159.1| cytochrome C biogenesis protein transmembrane region [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209534998|gb|ACI54933.1| cytochrome c biogenesis protein transmembrane region [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 249
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 101/215 (46%), Gaps = 18/215 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGA-----FGSGKS-------RAQIIGDSIAFSLGLATT 174
AG ++ LSPC L ++P L Y+ F G + R ++ ++ F+LG AT
Sbjct: 14 AGALSFLSPCVLPLVPPYLCYMAGISVEQFRGGGAVAIAPDIRRGVLFSALLFTLGFATV 73
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
LG GAS G A Q L + IVMGLN L + L + + + R
Sbjct: 74 FVALGAGASSIGMALRQHLDLLSKLGGLIIIVMGLNFLGLFRLGILAR----EARFQGGG 129
Query: 235 FPSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
P+++ AY+ GL FA +PC PVL +LG A+ + G LL Y+ G P +
Sbjct: 130 KPATLTGAYVMGLAFAFGWTPCIGPVLGAILGVAASRETVGSGAGLLAVYSLGLAIPFWI 189
Query: 294 AASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
AA F+GA LS FR+ + + G L+ GL
Sbjct: 190 AAGFSGAFMRFLSRFRRHLGTVEKVMGVFLVLTGL 224
>gi|408402087|ref|YP_006860051.1| putative cytochrome c-type biogenesis protein [Streptococcus
dysgalactiae subsp. equisimilis RE378]
gi|407968316|dbj|BAM61554.1| putative cytochrome c-type biogenesis protein [Streptococcus
dysgalactiae subsp. equisimilis RE378]
Length = 328
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 107/234 (45%), Gaps = 32/234 (13%)
Query: 97 FLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS 156
F Y+ E L LS +A +F AGL++ SPC VLP+ LG + + S
Sbjct: 80 FRYNKDNLREEL----LMTLSIVLIASVFAAGLLSFFSPCIFPVLPVYLGIL--LDADDS 133
Query: 157 RAQI----------IGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIV 206
R I ++AF GL+T +LG GA F G + L A L I+
Sbjct: 134 RTMTIFGKKLYWYGIVKTLAFIFGLSTIFVILGYGAGFLGNILYAVWFRYFLGA--LVII 191
Query: 207 MGLNLLEIIELQLPSF-----FDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLA 261
+G++ + +I ++ F F N R N A++ GLTF+ +PC PVL+
Sbjct: 192 LGIHQMGLITIKSLQFQKSLTFHNNKNRNGLFN------AFILGLTFSFGWTPCVGPVLS 245
Query: 262 TLLGYVATSKD-PLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWI 314
++L VA+ + GG +++ YT G P LL SFA + L F K S I
Sbjct: 246 SVLALVASGGNGAWQGGVMMIIYTLGLGIPFLL-ISFASGI-VLKQFNKLKSHI 297
>gi|403069871|ref|ZP_10911203.1| holocytochrome c synthase [Oceanobacillus sp. Ndiop]
Length = 234
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 108/229 (47%), Gaps = 39/229 (17%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-----------SIAFSLGLAT 173
FGAG ++ +SPCTL + P L YI +G S ++I + +I F +G ++
Sbjct: 10 FGAGFLSFISPCTLPLYPAFLSYI----TGMSVSEIKEENKWMNKRALLHTIFFLIGFSS 65
Query: 174 TLALLGVGASFAGK-------AYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNF 226
++G SF + + QIG L + GL IV N +++
Sbjct: 66 IFIMIGFTTSFISEFLLIYQDSIRQIGAVL-IIFFGLVIVGVFNFKFLMQ---------- 114
Query: 227 DPRAAAANFPSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTT 285
D + N P ++L G+ FAL +PC+ P+LA +L AT+ D IG +++SY
Sbjct: 115 DKKIKFKNRPGGFFGSFLIGMAFALGWTPCTGPILAIVLSLAATNPD--IGMIMMISYIL 172
Query: 286 GYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
G+ P L+ + F G L+ + +K S I G +++ G+ F D +
Sbjct: 173 GFSIPFLVLSFFIGRLKWI---KKHSVRIIKFGGYIMIFMGIALFFDWM 218
>gi|153939239|ref|YP_001389632.1| cytochrome c-type biogenesis protein CcdA [Clostridium botulinum F
str. Langeland]
gi|384460707|ref|YP_005673302.1| putative cytochrome c-type biogenesis protein CcdA [Clostridium
botulinum F str. 230613]
gi|152935135|gb|ABS40633.1| putative cytochrome c-type biogenesis protein CcdA [Clostridium
botulinum F str. Langeland]
gi|295317724|gb|ADF98101.1| putative cytochrome c-type biogenesis protein CcdA [Clostridium
botulinum F str. 230613]
Length = 227
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 26/215 (12%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSG-------KSRAQIIGDSIAFSLGLATTL 175
++F G++T +SPC L ++P+ Y+ F G K+RA I SIAF G
Sbjct: 5 LLFLEGIITFISPCILPMIPI---YVSYFAGGDIDNKNYKNRALI--SSIAFVAGFTFVF 59
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LLGV A G + + + + + ++ GLN L II + L R+ N
Sbjct: 60 TLLGVAAGTVGVIFNTYMREINIVSGSIMVIFGLNYLGIINVGLLH-------RSFKINK 112
Query: 236 P------SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVA 289
P S + L G+ F +PC P L + L + S + +G ++L+ Y+ G
Sbjct: 113 PTGHKKSSIISTALFGMIFGFGWTPCVGPFLGSALMIASNSTNVFMGASMLMIYSLGLGI 172
Query: 290 PLLLAASFAGALQSLLSF-RKFSSWINPMSGALLL 323
P +L+A +L++ F ++ IN +SG LL+
Sbjct: 173 PFILSALLIDSLKTTFEFIKRNYKIINRISGGLLI 207
>gi|418299521|ref|ZP_12911354.1| cytochrome c-type biogenesis protein [Agrobacterium tumefaciens
CCNWGS0286]
gi|355534986|gb|EHH04282.1| cytochrome c-type biogenesis protein [Agrobacterium tumefaciens
CCNWGS0286]
Length = 248
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 98/197 (49%), Gaps = 19/197 (9%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ-----------IIGDSIAFSLGLATTL 175
AG ++ LSPC L ++P L Y+ + R + ++ + F+LG AT
Sbjct: 14 AGALSFLSPCVLPLVPPYLCYMAGVSVEQFRTEDTAPRPEIRRAVLFSAFFFTLGFATVF 73
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LG GAS G Q L + I+MGLN L + + L S + R A
Sbjct: 74 VALGAGASTIGTLLRQNLDILAKIGGFIIILMGLNFLGVFRIGLFSR----EARFQGAGK 129
Query: 236 PSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPL-IGGTLLLSYTTGYVAPLLL 293
P+++ AY+ GL FA +PC PVL +LG VA ++D + G LL Y+ G P +
Sbjct: 130 PATLSGAYVMGLAFAFGWTPCIGPVLGAILG-VAAARDTVGDGAALLAVYSLGLAVPFWI 188
Query: 294 AASFAGA-LQSLLSFRK 309
AA+F+G+ ++ L+ FR+
Sbjct: 189 AAAFSGSFMRFLVRFRR 205
>gi|266619276|ref|ZP_06112211.1| cytochrome c biogenesis membrane protein [Clostridium hathewayi DSM
13479]
gi|288869192|gb|EFD01491.1| cytochrome c biogenesis membrane protein [Clostridium hathewayi DSM
13479]
Length = 232
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 96/200 (48%), Gaps = 28/200 (14%)
Query: 117 SFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSG---------KSRAQIIGDSIAF 167
SF S++ + AGLV+ SPC L +LP+ Y+ F SG + + ++ S+ F
Sbjct: 4 SFLSISTVLAAGLVSFFSPCILPLLPV---YLSLFSSGGVASKEDAARRKLRVFLKSVLF 60
Query: 168 SLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAI-VMGLNLLEIIELQLPSFFDNF 226
G++ LLG GA G I + L GL + ++GL+ +I ++ +
Sbjct: 61 VAGISVCFILLGFGAGALGSV---IRSKSFLTVMGLIVMILGLHQTGLIPIK-------W 110
Query: 227 DPRAAAANFPSS-----VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLL 281
R N S + A+L GLTF+ +PC PVL +LG ATS PL G L+
Sbjct: 111 LYREKRVNLERSRRGDYIGAFLLGLTFSFGWTPCIGPVLGAILGLSATSSRPLYGALLMA 170
Query: 282 SYTTGYVAPLLLAASFAGAL 301
Y+ G++ P L + F+ L
Sbjct: 171 VYSLGFLIPFLALSLFSDVL 190
>gi|187935626|ref|YP_001886993.1| cytochrome C biogenesis protein transmembrane region family
[Clostridium botulinum B str. Eklund 17B]
gi|187723779|gb|ACD25000.1| cytochrome C biogenesis protein transmembrane region family
[Clostridium botulinum B str. Eklund 17B]
Length = 433
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 110/234 (47%), Gaps = 24/234 (10%)
Query: 113 LSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS--------RAQIIGDS 164
++++S S ++F G+V+ LSPC L ++PL +GY+ ++ R +++ +
Sbjct: 5 ITSVSNVSYLLVFFEGIVSFLSPCVLPLIPLYIGYLAGNAKKQNNDGTYTYERKKVLFHT 64
Query: 165 IAFSLGLATTLALLGVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPS 221
I F LG++T +LG+ + G I T + + + + + E LQ
Sbjct: 65 IFFVLGISTAFFILGISFTTIGTFLNNNKMIFTKISGIIIIILGLFQMGIFEFKFLQ--- 121
Query: 222 FFDNFDPRAAAANFP----SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
R N + + AY+ G TF+ A +PC P L+++L +++KD IG
Sbjct: 122 -----RERKLKINLNGKKVNPLIAYIMGFTFSFAWTPCVGPALSSVLILASSAKDVAIGN 176
Query: 278 TLLLSYTTGYVAPLLLAASF-AGALQSLLSFRKFSSWINPMSGALLLGGGLYTF 330
L+L Y G+V P L+ F AL + + + + + G L++ G+ TF
Sbjct: 177 LLVLIYCLGFVIPFLILGLFTTQALNFIKNNKNVMKYTIKIGGVLMIIMGVMTF 230
>gi|169824790|ref|YP_001692401.1| putative c-type cytochrome biogenesis protein [Finegoldia magna
ATCC 29328]
gi|167831595|dbj|BAG08511.1| putative c-type cytochrome biogenesis protein [Finegoldia magna
ATCC 29328]
Length = 227
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 104/208 (50%), Gaps = 18/208 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAG 186
AG++TS PC+L ++P+ +GY+ G+ R + ++ FSLG + G+ A+ G
Sbjct: 26 AGILTSFLPCSLPMIPIIIGYLS--GNNYDRKKSFKVALVFSLGSILVFTIFGLTAALVG 83
Query: 187 KAYGQIGTGLPLAASGLAIVMGL---NLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYL 243
K Q + L I+M ++++II L +++ + A++
Sbjct: 84 KILNQFSRVFYIIIGILLILMAFQNWHVIKIISLN----------KSSKITKTGLLGAFI 133
Query: 244 AGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQS 303
AG+ A+ ASPCSTPVL +L+ A +++ L L + Y G + ++A G ++
Sbjct: 134 AGVIQAVFASPCSTPVLVSLMAIAANTRNILFSIVLFVFYGIGNCFLVFMSALLMGKVEE 193
Query: 304 LL---SFRKFSSWINPMSGALLLGGGLY 328
++ S+ K S I + GA+L+ GLY
Sbjct: 194 IIQNDSYTKVSKIIEIVLGAVLMLFGLY 221
>gi|395789440|ref|ZP_10468960.1| hypothetical protein ME9_00677 [Bartonella taylorii 8TBB]
gi|395429983|gb|EJF96035.1| hypothetical protein ME9_00677 [Bartonella taylorii 8TBB]
Length = 262
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 89/198 (44%), Gaps = 17/198 (8%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ-----------IIGDSIAFSLGLA 172
+F AG ++ LSPC L ++P L Y+ G R++ ++ IAF LG
Sbjct: 10 VFFAGALSFLSPCVLPLVPPYLCYMAGIGINDFRSEKQNEKVFIRRALLSSVIAFVLGFT 69
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
T LG AS GK G LAA + I+ GLN L ++ F + R
Sbjct: 70 TVFVALGASASTIGKFIGYYRDWFALAAGVIIIIFGLNFLGFFKIA----FLFREARFQT 125
Query: 233 ANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
N P+ + AY+ GL FA +PC P+L ++ T + G LL Y G P
Sbjct: 126 RNTPAGPLGAYIIGLAFAFGWTPCIGPILGPVITLAGTKETVGEGAVLLGIYALGLGVPF 185
Query: 292 LLAASFAGALQSLL-SFR 308
+LAA F+ + L +FR
Sbjct: 186 VLAALFSSSFMKFLGAFR 203
>gi|294783873|ref|ZP_06749195.1| cytochrome c-type biogenesis protein CcdA [Fusobacterium sp.
1_1_41FAA]
gi|294479685|gb|EFG27464.1| cytochrome c-type biogenesis protein CcdA [Fusobacterium sp.
1_1_41FAA]
Length = 225
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 107/213 (50%), Gaps = 19/213 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAG 186
AG+ + SPC ++P+ YI +G+ ++ + ++AF LGL+ T +LG GA F G
Sbjct: 21 AGIASFFSPCIFPIIPV---YISILSNGEKKS--VSKTLAFVLGLSVTYIVLGFGAGFIG 75
Query: 187 KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQA----Y 242
+ + + + + + L +++GL +++++L+ F + N+ Q+ +
Sbjct: 76 ELF--LNSKVRVIGGILVVILGLFQMDVLKLK-------FLEKTKVMNYEGEEQSLFSTF 126
Query: 243 LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQ 302
L GLTF+L +PC P+LA++L +S D L++ Y G P ++ + + L
Sbjct: 127 LLGLTFSLGWTPCVGPILASILILAGSSGDTGNSVMLMVLYLLGMATPFVIFSLASKTLF 186
Query: 303 SLLSF-RKFSSWINPMSGALLLGGGLYTFLDRL 334
+SF +K I + G L++ G D+L
Sbjct: 187 KKMSFIKKHLPLIKKIGGFLIIVMGFLLIFDKL 219
>gi|442322431|ref|YP_007362452.1| thiol:disulfide interchange protein DsbD [Myxococcus stipitatus DSM
14675]
gi|441490073|gb|AGC46768.1| thiol:disulfide interchange protein DsbD [Myxococcus stipitatus DSM
14675]
Length = 480
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 8/179 (4%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLAL 177
F A++F GL+T+L+PC ++P+T+ GA +SR + + + ++ +G+ +
Sbjct: 44 FLGAAIVFAGGLLTALTPCVYPLIPITVSVFGA-RKAESRGKAMLLTTSYIVGMGVVFSA 102
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGL---NLLEIIELQLPSFFDNFDPRAAAAN 234
LG+ A+ G+A+G + G P +GLA+ + L ++ EL LPS N R +
Sbjct: 103 LGILAAKTGQAFGSM-LGHPAVVTGLAVFLLLLASSMFGAFELALPSGLQN---RLNSVG 158
Query: 235 FPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
A+L G A+PC+ PVL LL +VA + + +G TLL Y G P +
Sbjct: 159 GAGVAGAFLMGSVSGFLAAPCTGPVLTGLLAFVAKTANTTLGATLLFIYALGIGVPFFI 217
>gi|187779587|ref|ZP_02996060.1| hypothetical protein CLOSPO_03183 [Clostridium sporogenes ATCC
15579]
gi|187773212|gb|EDU37014.1| cytochrome C biogenesis protein transmembrane region [Clostridium
sporogenes ATCC 15579]
Length = 228
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 97/191 (50%), Gaps = 16/191 (8%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLAL 177
F +L + F G+++S SPC LS LPL +GY+ +G + S+ FSLG+ T
Sbjct: 17 FLALIISFLGGIISSFSPCVLSSLPLIIGYVNKYGKNDKKTAF-KYSLFFSLGIIITFTF 75
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
LG+ +S G+ + G L + + +GL L+ +IE + + P
Sbjct: 76 LGIISSLVGRLFTSGGKLWYLLLGIIMLFVGLQLIGVIE-----------SKNKSCKVPK 124
Query: 238 SVQ----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
+ A+ G+ + +SPCSTP+L +L +V + + L+G +LL Y+ G+ ++L
Sbjct: 125 KRKGILGAFFLGILGGVLSSPCSTPILIAILAFVGSKGNILLGFLMLLLYSIGHCFVIIL 184
Query: 294 AASFAGALQSL 304
+ + G ++S+
Sbjct: 185 SGTSLGFVESI 195
>gi|168214333|ref|ZP_02639958.1| putative cytochrome C-type biogenesis protein [Clostridium
perfringens CPE str. F4969]
gi|170714212|gb|EDT26394.1| putative cytochrome C-type biogenesis protein [Clostridium
perfringens CPE str. F4969]
Length = 403
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 20/217 (9%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ------IIGDSIAFSLGLATTLA 176
++F G+++ SPC L +LP+ L + R +I +++ F+LG++TT
Sbjct: 8 IVFIEGILSIFSPCILPILPIYLSMLSNSSVEDIRDSNFKSGVLIRNTLFFTLGISTTFF 67
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIV-MGLNLLEIIELQLPSFFDNFDPRAAAANF 235
+LG S A ++ + + G+ I+ MGL L +I L + + R NF
Sbjct: 68 ILGSSIS-ALSSFFNTNKNIIMILGGVIILFMGLFYLGVINLNILN-------REKRLNF 119
Query: 236 P----SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
S + A++ G TF+ +PC P+LA++L ++SK+ LI L+L YT G++ P
Sbjct: 120 KYKNMSPLSAFVLGFTFSFGWTPCIGPILASVLVMASSSKNLLISNLLILVYTIGFILPF 179
Query: 292 LLAASFAGAL-QSLLSFRKFSSWINPMSGALLLGGGL 327
++A+ F G L + +K I +SG ++ GL
Sbjct: 180 IIASLFYGKLFKKFDGIKKHMDLIKKISGIFIIIAGL 216
>gi|163760207|ref|ZP_02167290.1| putative cytochrome c-type biogenesis protein [Hoeflea
phototrophica DFL-43]
gi|162282606|gb|EDQ32894.1| putative cytochrome c-type biogenesis protein [Hoeflea
phototrophica DFL-43]
Length = 233
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 133 LSPCTLSVLPLTLGYIGAF------GSG------KSRAQIIGDSIAFSLGLATTLALLGV 180
LSPC L ++P L Y+ GSG ++R + S+ F+LG AT LG
Sbjct: 4 LSPCVLPLVPPYLCYMAGVSVEDFRGSGAAERSRETRRAVFFASLFFTLGFATVFVALGA 63
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
GAS G A Q L + I+MGL+ L + + + + F A F
Sbjct: 64 GASSIGTALRQHMDLLAKVGGLVIILMGLHFLGVFRIGVLAREARFSGGGKPATFSG--- 120
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGA 300
AY+ GL FA +PC PVL +LG A+ + G LL +Y+ G P +AA F+
Sbjct: 121 AYVMGLAFAFGWTPCIGPVLGAVLGVAASHETVTSGALLLAAYSLGLAVPFWIAALFSER 180
Query: 301 LQSLLS-FRKFSSWINPMSGALLL 323
FRK + ++GALL+
Sbjct: 181 FMRFTQRFRKHLGTVEKITGALLV 204
>gi|237795228|ref|YP_002862780.1| putative cytochrome c-type biogenesis protein [Clostridium
botulinum Ba4 str. 657]
gi|229264127|gb|ACQ55160.1| putative cytochrome c-type biogenesis protein [Clostridium
botulinum Ba4 str. 657]
Length = 228
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 108/218 (49%), Gaps = 19/218 (8%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLAL 177
F +L + F G+++S SPC LS LPL +GY+ +G + S+ FSLG+ T
Sbjct: 17 FLALLISFLGGIISSFSPCILSSLPLIIGYVNKYGKNDKKTAF-KYSLFFSLGIIITFTS 75
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
LGV +S GK + G L + I++GL L+ +IE P
Sbjct: 76 LGVISSLVGKFFTSGGKLWYLLLGVVMILVGLQLIGVIE-----------SENKTCKVPK 124
Query: 238 SVQ----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
+ A+ G+ + +SPCSTP+L +L +V + + L+G +LL Y+ G+ ++L
Sbjct: 125 KRKGLLGAFFLGILGGVLSSPCSTPILIAILAFVGSKGNILLGFLMLLLYSIGHCFVIIL 184
Query: 294 AASFAGALQSL---LSFRKFSSWINPMSGALLLGGGLY 328
+ + G ++SL K ++ + + G ++L GLY
Sbjct: 185 SGTSLGFVESLSGSSKANKINNVLKIVLGIIILAIGLY 222
>gi|375090979|ref|ZP_09737285.1| hypothetical protein HMPREF9709_00147 [Helcococcus kunzii ATCC
51366]
gi|374564770|gb|EHR36051.1| hypothetical protein HMPREF9709_00147 [Helcococcus kunzii ATCC
51366]
Length = 238
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 98/194 (50%), Gaps = 16/194 (8%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIG---------DSIAFSLGLATT 174
+F AG+++ +PCT ++P+ +G++ + +++G ++AF LG++T+
Sbjct: 11 VFFAGMLSFFAPCTFPLIPVYIGFMTDEAGEYKKIKVLGLEINIGALIKTMAFVLGISTS 70
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASGL-AIVMGLNLLEIIELQLPSFFDNFDPRAAAA 233
+LG GA F G + L +GL I++G++ ++II L+ D +
Sbjct: 71 FVILGFGAGFLGSF---LNNKWVLTIAGLLVILLGIHQMDIIHLKKV---DRMNGVRLNV 124
Query: 234 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
+ YL G++F+L +PC PVLA++L +S G L+L Y G + P L+
Sbjct: 125 KTKGVLGTYLMGVSFSLGWTPCVGPVLASVLITSGSSNTQWYGAFLMLVYAIGLMIPFLI 184
Query: 294 AASFAGALQSLLSF 307
A + A+ + SF
Sbjct: 185 MAIASSAIINKFSF 198
>gi|170757104|ref|YP_001779910.1| cytochrome c-type biogenesis protein CcdA [Clostridium botulinum B1
str. Okra]
gi|429244053|ref|ZP_19207535.1| cytochrome c-type biogenesis protein CcdA [Clostridium botulinum
CFSAN001628]
gi|169122316|gb|ACA46152.1| DsbD family protein [Clostridium botulinum B1 str. Okra]
gi|428758973|gb|EKX81364.1| cytochrome c-type biogenesis protein CcdA [Clostridium botulinum
CFSAN001628]
Length = 227
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSG-------KSRAQIIGDSIAFSLGLATTL 175
++F G++T +SPC L ++P+ Y+ F G K+RA I SIAF G
Sbjct: 5 LLFLEGIITFISPCILPMIPI---YVSYFAGGDIDNKNYKNRALI--SSIAFVGGFTFVF 59
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LLGV A G + + + + + ++ GLN L II + L +F +
Sbjct: 60 TLLGVAAGTVGVIFNTYMREINIVSGSIMVIFGLNYLGIINVGL--LHRSFKINKPTGHK 117
Query: 236 PSSVQAY-LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
SS+ + L G+ F +PC P L + L + S + +G ++L+ Y+ G P +L+
Sbjct: 118 KSSIMSTALFGMIFGFGWTPCVGPFLGSALMIASNSTNVFMGASMLMIYSLGLGIPFILS 177
Query: 295 ASFAGALQSLLSF-RKFSSWINPMSGALLL 323
A +L++ F ++ IN +SG LL+
Sbjct: 178 ALLIDSLKTTFEFIKRNYKIINRISGGLLI 207
>gi|28209916|ref|NP_780860.1| cytochrome c-type biogenesis protein ccdA [Clostridium tetani E88]
gi|28202351|gb|AAO34797.1| cytochrome c-type biogenesis protein ccdA [Clostridium tetani E88]
Length = 229
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 117/226 (51%), Gaps = 16/226 (7%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFG----SGKSRAQIIGDSIAFSLGLATT 174
SL + F +GL++ LSPC L ++P+ L Y+ + K++ +I ++ F+LG
Sbjct: 4 VSLFLAFSSGLLSFLSPCVLPLVPIYLTYLTGSSIEEMNNKNKLTVIYKALGFTLGFTLI 63
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
++G+ + G+ + + + IV GL+++ + L++ +F+
Sbjct: 64 FIIMGISVTSLGQLFDRNKDIFRKIGGIIIIVFGLHIMGV--LKIKTFYYQ-RTMLQPQK 120
Query: 235 FPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
F S + ++ G+ FA+ +PC P+LA++L Y ++ + G LL++Y+ G P ++
Sbjct: 121 FKSGLSSFFIGMAFAIGWTPCVGPMLASILIYAGSTTTLVSGIKLLIAYSVGLGIPFII- 179
Query: 295 ASFAGALQSLLS--FRKFSSWINPM---SGALLLGGGLYTFLDRLF 335
+G L +S ++FS + N + SG +L+ G+ TF ++++
Sbjct: 180 ---SGFLVDFISGYIKRFSKYFNIVSIASGLVLIFMGIMTFTNKMY 222
>gi|188585888|ref|YP_001917433.1| cytochrome c biogenesis protein transmembrane region
[Natranaerobius thermophilus JW/NM-WN-LF]
gi|179350575|gb|ACB84845.1| cytochrome c biogenesis protein transmembrane region
[Natranaerobius thermophilus JW/NM-WN-LF]
Length = 235
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 100/226 (44%), Gaps = 17/226 (7%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYI-----GAFGSGKSRAQIIGDSIAFSLGLAT 173
S+++ F AGL+ SPC + P + YI G G ++ +++ +++ F G
Sbjct: 5 VSISIAFAAGLLFFFSPCVWPMYPAYISYIAGSSIGDVKDGLNKTKVMVNALGFVAGFTL 64
Query: 174 TLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAA 233
LLG A+ G+ + + A L I+ GL L L F +
Sbjct: 65 VFVLLGATATGIGEFLDERQNYFRVGAGILIILFGLQLGGFYRLP-------FLNKEKKI 117
Query: 234 NF----PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVA 289
NF P + + G TFA A SPC+T +L ++L Y + S G LL ++ G+
Sbjct: 118 NFIPQNPGFFSSAVFGTTFAFAWSPCTTAILFSILLYASQSDTVYQGMVLLAIFSMGFSI 177
Query: 290 PLLLAASFAGALQSLLS-FRKFSSWINPMSGALLLGGGLYTFLDRL 334
P LL A F L LS F K+ +N + G+LL+ G D+
Sbjct: 178 PFLLLAYFMRLLHPRLSKFSKYLPLLNKIGGSLLIVIGFLVLFDKF 223
>gi|188589017|ref|YP_001921916.1| cytochrome C biogenesis protein transmembrane region family
[Clostridium botulinum E3 str. Alaska E43]
gi|188499298|gb|ACD52434.1| cytochrome C biogenesis protein transmembrane region family
[Clostridium botulinum E3 str. Alaska E43]
Length = 433
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 110/234 (47%), Gaps = 24/234 (10%)
Query: 113 LSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS--------RAQIIGDS 164
++++S S ++F G+V+ LSPC L ++PL +GY+ ++ R +++ +
Sbjct: 5 ITSVSNVSYLLVFFEGIVSFLSPCVLPLIPLYIGYLAGNAKKQNNDGTYTYERKKVLFHT 64
Query: 165 IAFSLGLATTLALLGVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPS 221
I F LG++T +LG+ + G I T + + + + + E LQ
Sbjct: 65 IFFVLGISTAFFILGISFTTIGTFLNNNKMIFTKISGIIIIILGLFQMGIFEFKFLQ--- 121
Query: 222 FFDNFDPRAAAANFP----SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGG 277
R N + + AY+ G TF+ A +PC P L+++L +++KD IG
Sbjct: 122 -----RERKLKINLNGKKVNPLIAYIMGFTFSFAWTPCVGPALSSVLILASSAKDAAIGN 176
Query: 278 TLLLSYTTGYVAPLLLAASF-AGALQSLLSFRKFSSWINPMSGALLLGGGLYTF 330
L+L Y G+V P L+ F AL + + + + + G L++ G+ TF
Sbjct: 177 LLVLIYCLGFVIPFLILGLFTTQALNFIKNNKNVMKYTIKIGGILMIIMGVMTF 230
>gi|94994787|ref|YP_602885.1| Cytochrome c-type biogenesis protein ccdA [Streptococcus pyogenes
MGAS10750]
gi|94548295|gb|ABF38341.1| Cytochrome c-type biogenesis protein ccdA [Streptococcus pyogenes
MGAS10750]
Length = 236
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 97/199 (48%), Gaps = 27/199 (13%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD----------SI 165
LS + +FGAGL++ SPC VLP+ LG + + S+ I D ++
Sbjct: 3 LSLVLMVSVFGAGLLSFFSPCIFPVLPVYLGIL--LDADDSKTITIFDKKLYWYGIVKTL 60
Query: 166 AFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSF--- 222
AF GL+T +LG GA F G + L A L I++G++ + +I ++ F
Sbjct: 61 AFIFGLSTIFVILGYGAGFLGNILYAVWFRYLLGA--LVIILGIHQMGLITIKSLQFQKS 118
Query: 223 --FDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKD-PLIGGTL 279
F N R N A++ GLTF+ +PC PVL+++L VA+ + GG L
Sbjct: 119 LTFHNNKNRNGLFN------AFILGLTFSFGWTPCVGPVLSSVLALVASGGNGAWQGGVL 172
Query: 280 LLSYTTGYVAPLLLAASFA 298
++ YT G P LL SFA
Sbjct: 173 MIIYTLGLGIPFLL-ISFA 190
>gi|19746503|ref|NP_607639.1| cytochrome C-type biogenesis protein [Streptococcus pyogenes
MGAS8232]
gi|50914651|ref|YP_060623.1| cytochrome c-type biogenesis protein [Streptococcus pyogenes
MGAS10394]
gi|19748710|gb|AAL98138.1| putative cytochrome C-type biogenesis protein [Streptococcus
pyogenes MGAS8232]
gi|50903725|gb|AAT87440.1| Cytochrome c-type biogenesis protein [Streptococcus pyogenes
MGAS10394]
Length = 236
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 96/198 (48%), Gaps = 25/198 (12%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGY---------IGAFGSGKSRAQIIGDSIA 166
LS + +FGAGL++ SPC VLP+ LG I FG I+ ++A
Sbjct: 3 LSLVLMVSVFGAGLLSFFSPCIFPVLPVYLGILLDADDSKTITIFGKKLYWYGIV-KTLA 61
Query: 167 FSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSF---- 222
F GL+T +LG GA F G + L A L I++G++ + +I ++ F
Sbjct: 62 FIFGLSTIFVILGYGAGFLGNILYAVWFRSFLGA--LVIILGIHQMGLITIKSLQFQKSL 119
Query: 223 -FDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKD-PLIGGTLL 280
F N R N A++ GLTF+ +PC PVL+++L VA+ + GG L+
Sbjct: 120 TFHNNKNRNGLFN------AFILGLTFSFGWTPCVGPVLSSVLALVASGGNGAWQGGVLM 173
Query: 281 LSYTTGYVAPLLLAASFA 298
+ YT G P LL SFA
Sbjct: 174 IIYTLGLGIPFLL-ISFA 190
>gi|306838994|ref|ZP_07471815.1| cytochrome c biogenesis protein transmembrane region [Brucella sp.
NF 2653]
gi|306845915|ref|ZP_07478483.1| cytochrome c biogenesis protein transmembrane region [Brucella
inopinata BO1]
gi|306273807|gb|EFM55645.1| cytochrome c biogenesis protein transmembrane region [Brucella
inopinata BO1]
gi|306405900|gb|EFM62158.1| cytochrome c biogenesis protein transmembrane region [Brucella sp.
NF 2653]
Length = 253
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 101/226 (44%), Gaps = 24/226 (10%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRA------------QIIG-DSIAFSLGLA 172
GAG ++ LSPC L ++P L Y+ RA + +G ++ F LG
Sbjct: 16 GAGALSFLSPCVLPLVPPYLCYMAGVSVEDFRADASKATAKPSARRSLGFAALCFVLGFT 75
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
T LG GAS G + + A + I+MGLN L ++ L S F R A
Sbjct: 76 TVFVALGAGASSIGAFLRTWQQQIAIVAGVVIILMGLNFLGLLRLSFLSREARFQARNAP 135
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
A S + AY+ GL FA +PC PVL +L S G LL +Y+ G P L
Sbjct: 136 A---SPLGAYIMGLAFAFGWTPCIGPVLGPILTLAGGSSTVGEGALLLATYSLGLGIPFL 192
Query: 293 LAASFAGALQSLLS-FRKFSSWINP-------MSGALLLGGGLYTF 330
+AA F+GA LS FR + ++G L L GG+ +F
Sbjct: 193 IAALFSGAFMRFLSRFRVHLGKVEKAMGVLLIIAGVLFLTGGMQSF 238
>gi|334339147|ref|YP_004544127.1| cytochrome c biogenesis protein transmembrane region
[Desulfotomaculum ruminis DSM 2154]
gi|334090501|gb|AEG58841.1| cytochrome c biogenesis protein transmembrane region
[Desulfotomaculum ruminis DSM 2154]
Length = 232
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 103/223 (46%), Gaps = 14/223 (6%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFG------SGKSRAQIIGDSIAFSLGLA 172
SL + F AG+ + LSPC L ++P L Y+ +G +R +I ++ F+LG
Sbjct: 4 VSLYLAFSAGVASFLSPCVLPLVPGYLSYLAGVSVTSPDTAGINRGLMIRRALLFNLGFI 63
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASG--LAIVMGLNLLEIIELQLPSFFDNFDPRA 230
LLG S+ GK +G L G +MGL + I++ Q F
Sbjct: 64 LVFTLLGATGSYIGKF--LLGHKALLTKIGGVFIFIMGLQMTGILKWQ---FLYRTYQLK 118
Query: 231 AAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAP 290
+ V A L G+TFAL +PC PVL ++L Y S G LL Y+ G P
Sbjct: 119 HRLHMKGPVGAVLLGVTFALGWTPCIGPVLGSILVYAGMSGTVTKGILLLAVYSLGLAVP 178
Query: 291 LLLAASFAGAL-QSLLSFRKFSSWINPMSGALLLGGGLYTFLD 332
LLAA F + SL ++ I+ +SG +L+ G + FLD
Sbjct: 179 FLLAALFVSRIVPSLSRLNQYLPVISVVSGVILMLVGAFIFLD 221
>gi|17989028|ref|NP_541661.1| cytochrome C-type biogenesis protein CCDA [Brucella melitensis bv.
1 str. 16M]
gi|23500328|ref|NP_699768.1| cytochrome c-type biogenesis protein CcdA [Brucella suis 1330]
gi|62317559|ref|YP_223412.1| cytochrome c-type biogenesis protein CdcA [Brucella abortus bv. 1
str. 9-941]
gi|83269540|ref|YP_418831.1| cytochrome c biogenesis protein, transmembrane region [Brucella
melitensis biovar Abortus 2308]
gi|161620646|ref|YP_001594532.1| cytochrome c biogenesis protein transmembrane region [Brucella
canis ATCC 23365]
gi|163844736|ref|YP_001622391.1| hypothetical protein BSUIS_B0580 [Brucella suis ATCC 23445]
gi|189022813|ref|YP_001932554.1| cytochrome c biogenesis protein transmembrane region [Brucella
abortus S19]
gi|225629080|ref|ZP_03787113.1| cytochrome C-type biogenesis protein CCDA [Brucella ceti str. Cudo]
gi|225686370|ref|YP_002734342.1| cytochrome c biogenesis protein [Brucella melitensis ATCC 23457]
gi|237817106|ref|ZP_04596098.1| cytochrome C-type biogenesis protein CCDA [Brucella abortus str.
2308 A]
gi|256015360|ref|YP_003105369.1| cytochrome c-type biogenesis protein CcdA [Brucella microti CCM
4915]
gi|294853619|ref|ZP_06794291.1| cytochrome c-type biogenesis protein [Brucella sp. NVSL 07-0026]
gi|297249599|ref|ZP_06933300.1| cytochrome c-type biogenesis protein [Brucella abortus bv. 5 str.
B3196]
gi|340792368|ref|YP_004757832.1| cytochrome c-type biogenesis protein CcdA [Brucella pinnipedialis
B2/94]
gi|376278550|ref|YP_005108583.1| cytochrome c-type biogenesis protein CcdA [Brucella suis VBI22]
gi|384223111|ref|YP_005614276.1| cytochrome c-type biogenesis protein CcdA [Brucella suis 1330]
gi|384410194|ref|YP_005598814.1| cytochrome c biogenesis protein transmembrane region [Brucella
melitensis M28]
gi|17984868|gb|AAL53925.1| cytochrome c-type biogenesis protein ccda [Brucella melitensis bv.
1 str. 16M]
gi|23463942|gb|AAN33773.1| cytochrome c-type biogenesis protein CcdA [Brucella suis 1330]
gi|62197752|gb|AAX76051.1| CcdA, cytochrome c-type biogenesis protein CdcA [Brucella abortus
bv. 1 str. 9-941]
gi|82939814|emb|CAJ12822.1| Cytochrome c biogenesis protein, transmembrane region [Brucella
melitensis biovar Abortus 2308]
gi|161337457|gb|ABX63761.1| cytochrome c biogenesis protein transmembrane region [Brucella
canis ATCC 23365]
gi|163675459|gb|ABY39569.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|189021387|gb|ACD74108.1| Cytochrome c biogenesis protein, transmembrane region [Brucella
abortus S19]
gi|225615576|gb|EEH12625.1| cytochrome C-type biogenesis protein CCDA [Brucella ceti str. Cudo]
gi|225642475|gb|ACO02388.1| cytochrome c biogenesis protein [Brucella melitensis ATCC 23457]
gi|237787919|gb|EEP62135.1| cytochrome C-type biogenesis protein CCDA [Brucella abortus str.
2308 A]
gi|255998020|gb|ACU49707.1| cytochrome c-type biogenesis protein CcdA [Brucella microti CCM
4915]
gi|294819274|gb|EFG36274.1| cytochrome c-type biogenesis protein [Brucella sp. NVSL 07-0026]
gi|297173468|gb|EFH32832.1| cytochrome c-type biogenesis protein [Brucella abortus bv. 5 str.
B3196]
gi|326410741|gb|ADZ67805.1| Cytochrome c biogenesis protein, transmembrane region [Brucella
melitensis M28]
gi|340560827|gb|AEK56064.1| cytochrome c-type biogenesis protein CcdA [Brucella pinnipedialis
B2/94]
gi|343384559|gb|AEM20050.1| cytochrome c-type biogenesis protein CcdA [Brucella suis 1330]
gi|358259988|gb|AEU07721.1| cytochrome c-type biogenesis protein CcdA [Brucella suis VBI22]
Length = 253
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 97/216 (44%), Gaps = 17/216 (7%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRA------------QIIG-DSIAFSLGLA 172
GAG ++ LSPC L ++P L Y+ RA + +G ++ F LG
Sbjct: 16 GAGALSFLSPCVLPLVPPYLCYMAGVSVEDFRADASKATAKPSARRSLGFAALCFVLGFT 75
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
T LG GAS G + + A + I+MGLN L ++ L S F R A
Sbjct: 76 TVFVALGAGASSIGAFLRTWQQQIAIVAGVVIILMGLNFLGLLRLSFLSREARFQARNAP 135
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
A S + AY+ GL FA +PC PVL +L S G LL +Y+ G P L
Sbjct: 136 A---SPLGAYIMGLAFAFGWTPCIGPVLGPILTLAGGSSTVGEGALLLATYSLGLGIPFL 192
Query: 293 LAASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
+AA F+GA LS FR + G LL+ G+
Sbjct: 193 IAALFSGAFMRFLSRFRVHLGKVEKAMGVLLIIAGV 228
>gi|225572498|ref|ZP_03781362.1| hypothetical protein RUMHYD_00795 [Blautia hydrogenotrophica DSM
10507]
gi|225040038|gb|EEG50284.1| cytochrome C biogenesis protein transmembrane region [Blautia
hydrogenotrophica DSM 10507]
Length = 244
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 94/191 (49%), Gaps = 14/191 (7%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAG 186
AG+VTS +PC+LS +P+ L Y+GA K +A + S+ +LG+A T A+ G AS G
Sbjct: 26 AGVVTSFTPCSLSAVPMILAYVGAASDSKRKALRL--SLTMALGMAVTFAVFGSVASAIG 83
Query: 187 KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFF---DNFDPRAAAANFPSSV---- 239
+G + L +VM L + +I L LP D D + P +
Sbjct: 84 HVMHGMGHWWHVLLGVLMVVMALQIWGVIHL-LPEHEHGDDCKDHDHCECHSPRKLIRGT 142
Query: 240 ---QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGT-LLLSYTTGYVAPLLLAA 295
A+L G + AS C+TPV+ LL V S + G L++ Y G+ L++A
Sbjct: 143 GYKGAFLTGALGGVFASHCATPVMLALLAMVVESGHGIWWGIFLMILYALGHSILLVVAG 202
Query: 296 SFAGALQSLLS 306
+ GA++ L++
Sbjct: 203 TSYGAVEDLMN 213
>gi|328544311|ref|YP_004304420.1| cytochrome c biogenesis protein, transmembrane region [Polymorphum
gilvum SL003B-26A1]
gi|326414052|gb|ADZ71115.1| Cytochrome c biogenesis protein, transmembrane region [Polymorphum
gilvum SL003B-26A1]
Length = 244
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 109/215 (50%), Gaps = 25/215 (11%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDS-------------IAFSLGL 171
F AGL++ +SPC L ++P L Y+ +G S Q GD+ IAF LG
Sbjct: 10 FLAGLLSFISPCVLPIVPPYLCYL----AGVSVDQFKGDTVEPGTGRRVLLSAIAFVLGF 65
Query: 172 ATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAA 231
+ LG AS G++ + L + A + IVMGL+ L + + L F + R
Sbjct: 66 SAVFVGLGATASVIGQSIARYFDTLAIVAGIIIIVMGLHFLGVFRIAL--LFR--EARVH 121
Query: 232 AANFPSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLL-SYTTGYVA 289
P+ + A++ GL FA +PC PVLA +L +VA S D ++ G+LLL +Y+ G
Sbjct: 122 VDRQPAGLAGAFVMGLAFAFGWTPCVGPVLAAIL-FVAGSTDTVLRGSLLLATYSLGIGL 180
Query: 290 PLLLAASFAGALQSLLS-FRKFSSWINPMSGALLL 323
P +LAA+FA S + FR+ + GALL+
Sbjct: 181 PFILAAAFASRFLSWAARFRRHMGTVEKAMGALLV 215
>gi|297572019|ref|YP_003697793.1| cytochrome C biogenesis protein transmembrane region
[Arcanobacterium haemolyticum DSM 20595]
gi|296932366|gb|ADH93174.1| cytochrome c biogenesis protein transmembrane region
[Arcanobacterium haemolyticum DSM 20595]
Length = 229
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 6/208 (2%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
++AV F AG+V+ SPC L ++P+ + IG SR + +++AF +G + L
Sbjct: 2 TIAVAFMAGIVSFASPCFLPIVPVFIAQLIGGTPGRVSRWSAVWNAVAFIVGFSMVFIGL 61
Query: 179 GVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNF--DPRAAAANFP 236
V G GQ L ++ + IV+GL++ ++I ++P F D R+A P
Sbjct: 62 WVSIGLFGHVIGQYSEILRVSGGSVLIVLGLHMAQLI--RIPVLDRQFSGDMRSATRVRP 119
Query: 237 SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
++ L GL F +PC P+L +L + + + G L+L+Y G P++L A
Sbjct: 120 GVGRSGLMGLIFGAGWTPCIGPILGGILALASQTDTVVRGIVLMLAYCVGLGLPIVLVAV 179
Query: 297 FAGALQSLLS-FRKFSSWINPMSGALLL 323
A ++ FR+ I+ +SGALL+
Sbjct: 180 GAVDVRERFGWFRRHHDAISLVSGALLV 207
>gi|253827562|ref|ZP_04870447.1| cytochrome c biogenesis protein [Helicobacter canadensis MIT
98-5491]
gi|313141770|ref|ZP_07803963.1| cytochrome c biogenesis protein [Helicobacter canadensis MIT
98-5491]
gi|253510968|gb|EES89627.1| cytochrome c biogenesis protein [Helicobacter canadensis MIT
98-5491]
gi|313130801|gb|EFR48418.1| cytochrome c biogenesis protein [Helicobacter canadensis MIT
98-5491]
Length = 249
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 14/215 (6%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFG----------SGKSRAQIIGDSIAFSLGLATT 174
F AG++T +SPC L ++P L YI K R I+ +++ F LG+
Sbjct: 18 FIAGILTFVSPCVLPLIPAYLSYISEVSLSELKAYETLDFKMRLVIVRNALFFVLGMGIV 77
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
LLG A+ + + A G+ I+ GL+ +I++ ++ F + N
Sbjct: 78 FVLLGAVAARILSGGILLSPIVAYFAGGILIIFGLHTARVIQIPFLNYQKTFSIHMISFN 137
Query: 235 FPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
F +L G++F+L +PC P+LA ++ + + G L++ YT G+ P LL
Sbjct: 138 FLRDFFTPFLLGVSFSLGWTPCVGPILAGIISLASLEANE--GVMLMVIYTLGFSLPFLL 195
Query: 294 AASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
A G + + L +K+ WI +G LL+ G+
Sbjct: 196 CAFLVGYIFAFLEHIKKYFKWIEWCAGGLLIVIGI 230
>gi|254460314|ref|ZP_05073730.1| cytochrome c biogenesis protein CcdA [Rhodobacterales bacterium
HTCC2083]
gi|206676903|gb|EDZ41390.1| cytochrome c biogenesis protein CcdA [Rhodobacteraceae bacterium
HTCC2083]
Length = 250
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 98/209 (46%), Gaps = 12/209 (5%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAF------GSGKSRAQIIGDSIAFSLGLATTLALLGV 180
AG+V+ LSPC L ++P L Y+ G+ R Q +I F +GL+T LLG
Sbjct: 21 AGIVSFLSPCVLPIVPPYLAYMSGISLPEMQGTKAGRRQTGIAAIFFVMGLSTIFLLLGF 80
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP-SSV 239
AS G + Q A + I+ GL+ L I + F N + R A + S+
Sbjct: 81 TASIFGAFFLQNQVLFGQIAGIVIIIFGLHFLGIFRIG----FLNREARLDAGDRGGSAF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
AY+ GL FA +PC P L +L A+ D L G LL Y G P LLAA F
Sbjct: 137 GAYVLGLAFAFGWTPCIGPQLGAILSLAASEADVLRGTMLLGIYALGLGIPFLLAAFFID 196
Query: 300 ALQSLLS-FRKFSSWINPMSGALLLGGGL 327
+++ F++ I +SG LL+ GL
Sbjct: 197 RAMGVMNLFKRHMGLIEKISGVLLILVGL 225
>gi|265985449|ref|ZP_06098184.1| cytochrome c biogenesis protein transmembrane region [Brucella sp.
83/13]
gi|264664041|gb|EEZ34302.1| cytochrome c biogenesis protein transmembrane region [Brucella sp.
83/13]
Length = 248
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 101/226 (44%), Gaps = 24/226 (10%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRA------------QIIG-DSIAFSLGLA 172
GAG ++ LSPC L ++P L Y+ RA + +G ++ F LG
Sbjct: 11 GAGALSFLSPCVLPLVPPYLCYMAGVSVEDFRADASKATAKPSARRSLGFAALCFVLGFT 70
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
T LG GAS G + + A + I+MGLN L ++ L S F R A
Sbjct: 71 TVFVALGAGASSIGAFLRTWQQQIAIVAGVVIILMGLNFLGLLRLSFLSREARFQARNAP 130
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
A S + AY+ GL FA +PC PVL +L S G LL +Y+ G P L
Sbjct: 131 A---SPLGAYIMGLAFAFGWTPCIGPVLGPILTLAGGSSTVGEGALLLATYSLGLGIPFL 187
Query: 293 LAASFAGALQSLLS-FRKFSSWINP-------MSGALLLGGGLYTF 330
+AA F+GA LS FR + ++G L L GG+ +F
Sbjct: 188 IAALFSGAFMRFLSRFRVHLGKVEKAMGVLLIIAGVLFLTGGMQSF 233
>gi|168184876|ref|ZP_02619540.1| putative cytochrome c-type biogenesis protein [Clostridium
botulinum Bf]
gi|182672074|gb|EDT84035.1| putative cytochrome c-type biogenesis protein [Clostridium
botulinum Bf]
Length = 228
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 108/216 (50%), Gaps = 19/216 (8%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
+L + F G+++S SPC LS LPL +GY+ +G + S+ FSLG+ T LG
Sbjct: 19 ALLISFLGGIISSFSPCILSSLPLIIGYVNKYGRDDKKTAF-KYSLFFSLGIIITFTSLG 77
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
+ +S GK + G L + I +GL L+ +IE + A P
Sbjct: 78 IISSLVGKFFTSGGKLWYLLLGVVMIFVGLQLIGVIE-----------SKNKACKVPKKR 126
Query: 240 Q----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
+ A+ G+ + +SPCSTP+L +L +V + + L+G +LL Y+ G+ ++L+
Sbjct: 127 KGLLGAFFLGILGGVLSSPCSTPILIAILAFVGSKGNILLGFLMLLLYSIGHCFVIILSG 186
Query: 296 SFAGALQSL---LSFRKFSSWINPMSGALLLGGGLY 328
+ G ++SL K ++ + + G ++L GLY
Sbjct: 187 TSLGFVESLSGSSKANKINNVLKIILGIIVLAMGLY 222
>gi|84517080|ref|ZP_01004436.1| putative cytochrome c-type biogenesis protein CcdA [Loktanella
vestfoldensis SKA53]
gi|84508975|gb|EAQ05436.1| putative cytochrome c-type biogenesis protein CcdA [Loktanella
vestfoldensis SKA53]
Length = 276
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 103/221 (46%), Gaps = 22/221 (9%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFG------SGKSRAQIIGDSIAFSLGLAT 173
++ V AG+++ LSPC L V+P L Y+G + +R ++ ++ F +GL+T
Sbjct: 40 AMIVALAAGVLSFLSPCVLPVVPPYLAYMGGVSVTEMEKASTARRRVFIAALFFVMGLST 99
Query: 174 TLALLGVGASFAGK------AYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFD 227
LLG+ S G+ Y IG GL + +V+G + + + + F D
Sbjct: 100 VFLLLGIAFSTMGRMLIGVQEYFVIGAGL------VVMVLGAHFVGVFRI---GFLDREM 150
Query: 228 PRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGY 287
A S+ AYL GL FA +PC PVL +L A+ D G LL +Y G
Sbjct: 151 RLDAGDKGGSAFGAYLLGLAFAFGWTPCLGPVLGAILSLAASEADVGRGTVLLGAYAVGL 210
Query: 288 VAPLLLAASFAGALQSLLSF-RKFSSWINPMSGALLLGGGL 327
P LL A+F L+ ++ + ++ I SG LL GL
Sbjct: 211 GIPFLLVAAFFPRLKGVMGWMKRHMRQIEATSGLLLWTVGL 251
>gi|424914072|ref|ZP_18337436.1| cytochrome c biogenesis protein [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392850248|gb|EJB02769.1| cytochrome c biogenesis protein [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 249
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 101/215 (46%), Gaps = 18/215 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGA-----FGSGKS-------RAQIIGDSIAFSLGLATT 174
AG ++ LSPC L ++P L Y+ F G + R ++ ++ F+LG AT
Sbjct: 14 AGALSFLSPCVLPLVPPYLCYMAGISVEQFRGGGAVAIAPDIRRGVLFSALLFTLGFATV 73
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
LG GAS G A Q L + IVMGLN L + L + + + R
Sbjct: 74 FVALGAGASSIGMALRQHLDLLSKLGGLIIIVMGLNFLGLFRLGILAR----EARFQGGG 129
Query: 235 FPSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
P+++ AY+ GL FA +PC PVL +LG A+ + G LL Y+ G P +
Sbjct: 130 KPATLTGAYVMGLAFAFGWTPCIGPVLGAILGVAASRETVGSGAGLLAVYSLGLAFPFWI 189
Query: 294 AASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
AA F+GA LS FR+ + + G L+ GL
Sbjct: 190 AAGFSGAFMRFLSRFRRHLGTVEKVMGIFLVLTGL 224
>gi|417927731|ref|ZP_12571119.1| cytochrome C biogenesis protein transmembrane region [Streptococcus
dysgalactiae subsp. equisimilis SK1250]
gi|340765605|gb|EGR88131.1| cytochrome C biogenesis protein transmembrane region [Streptococcus
dysgalactiae subsp. equisimilis SK1250]
Length = 236
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 96/198 (48%), Gaps = 25/198 (12%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGY---------IGAFGSGKSRAQIIGDSIA 166
LS +A +F AGL++ SPC VLP+ LG I FG I+ ++A
Sbjct: 3 LSIVLIASVFAAGLLSFFSPCIFPVLPVYLGILLDADDSKTITIFGKKLYWYGIV-KTLA 61
Query: 167 FSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSF---- 222
F GL+T +LG GA F G + L A L I++G++ + +I ++ F
Sbjct: 62 FIFGLSTIFVILGYGAGFLGNILYAVWFRYFLGA--LVIILGIHQMGLITIKSLQFQKSL 119
Query: 223 -FDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKD-PLIGGTLL 280
F N R N A++ GLTF+ +PC PVL+++L VA+ + GG L+
Sbjct: 120 TFHNNKNRNGLFN------AFILGLTFSFGWTPCVGPVLSSVLALVASGGNGAWQGGVLM 173
Query: 281 LSYTTGYVAPLLLAASFA 298
+ YT G P LL SFA
Sbjct: 174 IIYTLGLGIPFLL-ISFA 190
>gi|148558709|ref|YP_001257572.1| cytochrome c-type biogenesis protein CcdA [Brucella ovis ATCC
25840]
gi|260544796|ref|ZP_05820617.1| cytochrome c biogenesis protein [Brucella abortus NCTC 8038]
gi|260564675|ref|ZP_05835160.1| cytochrome c biogenesis protein [Brucella melitensis bv. 1 str.
16M]
gi|260568129|ref|ZP_05838598.1| cytochrome c biogenesis protein [Brucella suis bv. 4 str. 40]
gi|260756653|ref|ZP_05869001.1| cytochrome c biogenesis protein transmembrane region [Brucella
abortus bv. 6 str. 870]
gi|260760084|ref|ZP_05872432.1| cytochrome c biogenesis protein transmembrane region [Brucella
abortus bv. 4 str. 292]
gi|260763322|ref|ZP_05875654.1| cytochrome c biogenesis protein transmembrane region [Brucella
abortus bv. 2 str. 86/8/59]
gi|260882470|ref|ZP_05894084.1| cytochrome c biogenesis protein [Brucella abortus bv. 9 str. C68]
gi|261216036|ref|ZP_05930317.1| cytochrome c biogenesis protein transmembrane region [Brucella
abortus bv. 3 str. Tulya]
gi|261217200|ref|ZP_05931481.1| cytochrome c biogenesis protein transmembrane region [Brucella ceti
M13/05/1]
gi|261220420|ref|ZP_05934701.1| cytochrome c biogenesis protein [Brucella ceti B1/94]
gi|261313350|ref|ZP_05952547.1| cytochrome c biogenesis protein transmembrane region [Brucella
pinnipedialis M163/99/10]
gi|261318739|ref|ZP_05957936.1| cytochrome c biogenesis protein transmembrane region [Brucella
pinnipedialis B2/94]
gi|261320071|ref|ZP_05959268.1| cytochrome c biogenesis protein transmembrane region [Brucella ceti
M644/93/1]
gi|261323173|ref|ZP_05962370.1| cytochrome c biogenesis protein [Brucella neotomae 5K33]
gi|261750293|ref|ZP_05994002.1| cytochrome c biogenesis protein transmembrane region [Brucella suis
bv. 5 str. 513]
gi|261753566|ref|ZP_05997275.1| cytochrome c biogenesis protein transmembrane region [Brucella suis
bv. 3 str. 686]
gi|261756790|ref|ZP_06000499.1| cytochrome c biogenesis protein [Brucella sp. F5/99]
gi|265986537|ref|ZP_06099094.1| cytochrome c biogenesis protein transmembrane region [Brucella
pinnipedialis M292/94/1]
gi|265989898|ref|ZP_06102455.1| cytochrome c biogenesis protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265992997|ref|ZP_06105554.1| cytochrome c biogenesis protein [Brucella melitensis bv. 3 str.
Ether]
gi|265996229|ref|ZP_06108786.1| cytochrome c biogenesis protein transmembrane region [Brucella ceti
M490/95/1]
gi|265999108|ref|ZP_05465021.2| cytochrome c biogenesis protein [Brucella melitensis bv. 2 str.
63/9]
gi|376271199|ref|YP_005114244.1| cytochrome c biogenesis protein transmembrane region [Brucella
abortus A13334]
gi|376276717|ref|YP_005152778.1| cytochrome c biogenesis protein transmembrane region [Brucella
canis HSK A52141]
gi|384213094|ref|YP_005602177.1| cytochrome c biogenesis protein transmembrane region [Brucella
melitensis M5-90]
gi|384446721|ref|YP_005660939.1| cytochrome c biogenesis protein [Brucella melitensis NI]
gi|423168547|ref|ZP_17155249.1| hypothetical protein M17_02236 [Brucella abortus bv. 1 str. NI435a]
gi|423172020|ref|ZP_17158694.1| hypothetical protein M19_02552 [Brucella abortus bv. 1 str. NI474]
gi|423174249|ref|ZP_17160919.1| hypothetical protein M1A_01646 [Brucella abortus bv. 1 str. NI486]
gi|423176126|ref|ZP_17162792.1| hypothetical protein M1E_00388 [Brucella abortus bv. 1 str. NI488]
gi|423181449|ref|ZP_17168089.1| hypothetical protein M1G_02548 [Brucella abortus bv. 1 str. NI010]
gi|423184582|ref|ZP_17171218.1| hypothetical protein M1I_02550 [Brucella abortus bv. 1 str. NI016]
gi|423187732|ref|ZP_17174345.1| hypothetical protein M1K_02549 [Brucella abortus bv. 1 str. NI021]
gi|423190153|ref|ZP_17176762.1| hypothetical protein M1M_01834 [Brucella abortus bv. 1 str. NI259]
gi|148369994|gb|ABQ62866.1| cytochrome c-type biogenesis protein CcdA [Brucella ovis ATCC
25840]
gi|260098067|gb|EEW81941.1| cytochrome c biogenesis protein [Brucella abortus NCTC 8038]
gi|260152318|gb|EEW87411.1| cytochrome c biogenesis protein [Brucella melitensis bv. 1 str.
16M]
gi|260154794|gb|EEW89875.1| cytochrome c biogenesis protein [Brucella suis bv. 4 str. 40]
gi|260670402|gb|EEX57342.1| cytochrome c biogenesis protein transmembrane region [Brucella
abortus bv. 4 str. 292]
gi|260673743|gb|EEX60564.1| cytochrome c biogenesis protein transmembrane region [Brucella
abortus bv. 2 str. 86/8/59]
gi|260676761|gb|EEX63582.1| cytochrome c biogenesis protein transmembrane region [Brucella
abortus bv. 6 str. 870]
gi|260871998|gb|EEX79067.1| cytochrome c biogenesis protein [Brucella abortus bv. 9 str. C68]
gi|260917643|gb|EEX84504.1| cytochrome c biogenesis protein transmembrane region [Brucella
abortus bv. 3 str. Tulya]
gi|260919004|gb|EEX85657.1| cytochrome c biogenesis protein [Brucella ceti B1/94]
gi|260922289|gb|EEX88857.1| cytochrome c biogenesis protein transmembrane region [Brucella ceti
M13/05/1]
gi|261292761|gb|EEX96257.1| cytochrome c biogenesis protein transmembrane region [Brucella ceti
M644/93/1]
gi|261297962|gb|EEY01459.1| cytochrome c biogenesis protein transmembrane region [Brucella
pinnipedialis B2/94]
gi|261299153|gb|EEY02650.1| cytochrome c biogenesis protein [Brucella neotomae 5K33]
gi|261302376|gb|EEY05873.1| cytochrome c biogenesis protein transmembrane region [Brucella
pinnipedialis M163/99/10]
gi|261736774|gb|EEY24770.1| cytochrome c biogenesis protein [Brucella sp. F5/99]
gi|261740046|gb|EEY27972.1| cytochrome c biogenesis protein transmembrane region [Brucella suis
bv. 5 str. 513]
gi|261743319|gb|EEY31245.1| cytochrome c biogenesis protein transmembrane region [Brucella suis
bv. 3 str. 686]
gi|262550526|gb|EEZ06687.1| cytochrome c biogenesis protein transmembrane region [Brucella ceti
M490/95/1]
gi|262763867|gb|EEZ09899.1| cytochrome c biogenesis protein [Brucella melitensis bv. 3 str.
Ether]
gi|263000567|gb|EEZ13257.1| cytochrome c biogenesis protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263092226|gb|EEZ16523.1| cytochrome c biogenesis protein [Brucella melitensis bv. 2 str.
63/9]
gi|264658734|gb|EEZ28995.1| cytochrome c biogenesis protein transmembrane region [Brucella
pinnipedialis M292/94/1]
gi|326554034|gb|ADZ88673.1| Cytochrome c biogenesis protein, transmembrane region [Brucella
melitensis M5-90]
gi|349744718|gb|AEQ10260.1| cytochrome c biogenesis protein [Brucella melitensis NI]
gi|363402371|gb|AEW19340.1| Cytochrome c biogenesis protein, transmembrane region [Brucella
abortus A13334]
gi|363405091|gb|AEW15385.1| Cytochrome c biogenesis protein, transmembrane region [Brucella
canis HSK A52141]
gi|374536442|gb|EHR07962.1| hypothetical protein M19_02552 [Brucella abortus bv. 1 str. NI474]
gi|374537753|gb|EHR09263.1| hypothetical protein M17_02236 [Brucella abortus bv. 1 str. NI435a]
gi|374540250|gb|EHR11752.1| hypothetical protein M1A_01646 [Brucella abortus bv. 1 str. NI486]
gi|374546039|gb|EHR17499.1| hypothetical protein M1G_02548 [Brucella abortus bv. 1 str. NI010]
gi|374546882|gb|EHR18341.1| hypothetical protein M1I_02550 [Brucella abortus bv. 1 str. NI016]
gi|374554728|gb|EHR26138.1| hypothetical protein M1E_00388 [Brucella abortus bv. 1 str. NI488]
gi|374555536|gb|EHR26945.1| hypothetical protein M1K_02549 [Brucella abortus bv. 1 str. NI021]
gi|374556193|gb|EHR27598.1| hypothetical protein M1M_01834 [Brucella abortus bv. 1 str. NI259]
Length = 248
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 97/216 (44%), Gaps = 17/216 (7%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRA------------QIIG-DSIAFSLGLA 172
GAG ++ LSPC L ++P L Y+ RA + +G ++ F LG
Sbjct: 11 GAGALSFLSPCVLPLVPPYLCYMAGVSVEDFRADASKATAKPSARRSLGFAALCFVLGFT 70
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
T LG GAS G + + A + I+MGLN L ++ L S F R A
Sbjct: 71 TVFVALGAGASSIGAFLRTWQQQIAIVAGVVIILMGLNFLGLLRLSFLSREARFQARNAP 130
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
A S + AY+ GL FA +PC PVL +L S G LL +Y+ G P L
Sbjct: 131 A---SPLGAYIMGLAFAFGWTPCIGPVLGPILTLAGGSSTVGEGALLLATYSLGLGIPFL 187
Query: 293 LAASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
+AA F+GA LS FR + G LL+ G+
Sbjct: 188 IAALFSGAFMRFLSRFRVHLGKVEKAMGVLLIIAGV 223
>gi|398378714|ref|ZP_10536870.1| cytochrome c biogenesis protein [Rhizobium sp. AP16]
gi|397724366|gb|EJK84837.1| cytochrome c biogenesis protein [Rhizobium sp. AP16]
Length = 250
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 133 LSPCTLSVLPLTLGYIG------------AFGSGKS-RAQIIGDSIAFSLGLATTLALLG 179
LSPC L ++P L Y+ A SG S R ++ ++ F+LG AT LG
Sbjct: 20 LSPCVLPLVPPYLCYMAGISVEQFRGGGAAVASGPSVRGNVLFSALFFTLGFATVFIALG 79
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
GAS G Q L + ++MGLN L + L + + F A
Sbjct: 80 AGASSIGLLLRQHLDILAKIGGLIIVIMGLNFLGVFRLGILAREARFQGNGKPATLTG-- 137
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
AY+ GL FA +PC PVL +LG A+ + G LL Y+ G P +AA F+G
Sbjct: 138 -AYIMGLAFAFGWTPCIGPVLGAILGVAASRETIGAGAGLLAIYSLGLAIPFWIAAGFSG 196
Query: 300 ALQS-LLSFRKFSSWINPMSGALLLGGGL 327
A S L+ FR+ + + G L+ GL
Sbjct: 197 AFMSFLVRFRRHLGTVEKVMGGFLVLTGL 225
>gi|383480307|ref|YP_005389201.1| cytochrome c-type biogenesis protein CcdA [Streptococcus pyogenes
MGAS15252]
gi|383494289|ref|YP_005411965.1| cytochrome c-type biogenesis protein CcdA [Streptococcus pyogenes
MGAS1882]
gi|378928297|gb|AFC66503.1| cytochrome c-type biogenesis protein CcdA [Streptococcus pyogenes
MGAS15252]
gi|378930016|gb|AFC68433.1| cytochrome c-type biogenesis protein CcdA [Streptococcus pyogenes
MGAS1882]
Length = 236
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 93/190 (48%), Gaps = 25/190 (13%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGY---------IGAFGSGKSRAQIIGDSIAFSLGLATT 174
+FGAGL++ SPC VLP+ LG I FG I+ ++AF GL+T
Sbjct: 11 VFGAGLLSFFSPCIFPVLPVYLGILLDADDSKTITIFGKKLYWYGIV-KTLAFIFGLSTI 69
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSF-----FDNFDPR 229
+LG GA F G + L A L I++G++ + +I ++ F F N R
Sbjct: 70 FVILGYGAGFLGNILYAVWFRYLLGA--LVIILGIHQMGLITIKSLQFQKSLTFHNNKNR 127
Query: 230 AAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKD-PLIGGTLLLSYTTGYV 288
N A++ GLTF+ +PC PVL+++L VA+ + GG L++ YT G
Sbjct: 128 NGLFN------AFILGLTFSFGWTPCVGPVLSSVLALVASGGNGAWQGGVLMIIYTLGLG 181
Query: 289 APLLLAASFA 298
P LL SFA
Sbjct: 182 IPFLL-ISFA 190
>gi|251782963|ref|YP_002997266.1| cytochrome c-type biogenesis protein [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
gi|242391593|dbj|BAH82052.1| putative cytochrome c-type biogenesis protein [Streptococcus
dysgalactiae subsp. equisimilis GGS_124]
Length = 236
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 96/198 (48%), Gaps = 25/198 (12%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYI---------GAFGSGKSRAQIIGDSIA 166
LS +A +F AGL++ SPC VLP+ LG + FG I+ +IA
Sbjct: 3 LSIVLIASVFAAGLLSFFSPCIFPVLPVYLGILLDADDSRTMTIFGKKLYWYGIV-KTIA 61
Query: 167 FSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSF---- 222
F GL+T +LG GA F G + L A L I++G++ + +I ++ F
Sbjct: 62 FIFGLSTIFVILGYGAGFLGNILYAVWFRYFLGA--LVIILGIHQMGLITIKSLQFQKSL 119
Query: 223 -FDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKD-PLIGGTLL 280
F N R N A++ GLTF+ +PC PVL+++L VA+ + GG L+
Sbjct: 120 TFHNNKNRNGLFN------AFILGLTFSFGWTPCVGPVLSSVLALVASGGNGAWQGGLLM 173
Query: 281 LSYTTGYVAPLLLAASFA 298
+ YT G P LL SFA
Sbjct: 174 IVYTLGLGIPFLL-LSFA 190
>gi|317059204|ref|ZP_07923689.1| cytochrome c-type biogenesis protein ccdA [Fusobacterium sp.
3_1_5R]
gi|313684880|gb|EFS21715.1| cytochrome c-type biogenesis protein ccdA [Fusobacterium sp.
3_1_5R]
Length = 217
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGAS 183
++ AGL++ SPC +LP+ Y+G SG R+ + +I F +GL+++ LLG GA
Sbjct: 11 VYLAGLLSFFSPCIFPLLPV---YLGMLSSGGKRSLL--KTIVFVIGLSSSFVLLGFGA- 64
Query: 184 FAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP-----SS 238
G +G L +S I+ G+ ++ +Q+ +F R S
Sbjct: 65 ------GSVGA--LLTSSTFRIISGVVVILFGFIQMDVIKASFLERTKLVELKQKEEDSV 116
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFA 298
+ A++ G TF+L +PC P+L ++L + P+ G ++ Y G P L+ + F+
Sbjct: 117 LGAFILGFTFSLGWTPCVGPILTSILFLSSGGGSPVYGALMMFIYVLGLATPFLIFSFFS 176
Query: 299 GALQSLL-SFRKFSSWINPMSGALLLGGGLYTFLDRL 334
L S + SFRK+ + + G L++ G+ DRL
Sbjct: 177 KQLGSKMGSFRKYLVPLKKIGGVLIVIMGILLLTDRL 213
>gi|85702985|ref|ZP_01034089.1| putative cytochrome c-type biogenesis protein CcdA [Roseovarius sp.
217]
gi|85671913|gb|EAQ26770.1| putative cytochrome c-type biogenesis protein CcdA [Roseovarius sp.
217]
Length = 250
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 87/193 (45%), Gaps = 9/193 (4%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGAFG------SGKSRAQIIGDSIAFSLGLATTLA 176
V AG+++ LSPC L ++P L Y+ SG SRA+ + ++ F LGL+T
Sbjct: 17 VALAAGIISFLSPCVLPIVPPYLAYMSGISLSDLSESGSSRARAVVPALFFVLGLSTVFI 76
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
LG AS G + Q + A L + G + + + ++ F D A
Sbjct: 77 FLGFTASAIGTVFLQYQSYFNTIAGVLVMAFGAHFVGVYRIK---FLDREARIDAGDKGG 133
Query: 237 SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
SS AY+ GL FA +PC P L +L A+ G LL Y G P LL A+
Sbjct: 134 SSFGAYVLGLAFAFGWTPCIGPQLGAILSLAASEGSVARGTALLAIYAIGLGVPFLLVAA 193
Query: 297 FAGALQSLLSFRK 309
F LQ L+ + K
Sbjct: 194 FLPRLQGLMGWMK 206
>gi|424881490|ref|ZP_18305122.1| cytochrome c biogenesis protein [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392517853|gb|EIW42585.1| cytochrome c biogenesis protein [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 249
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 101/215 (46%), Gaps = 18/215 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAF------GSG------KSRAQIIGDSIAFSLGLATT 174
AG ++ LSPC L ++P L Y+ G G R + ++ F+LG AT
Sbjct: 14 AGALSFLSPCVLPLVPPYLCYMAGISVEQFRGGGAVAVAPDVRRGVFFSALFFTLGFATV 73
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
LG GAS G A Q L + IVMGLN L + + + + + R ++
Sbjct: 74 FVALGAGASSIGMALRQHLDLLSKIGGLIIIVMGLNFLGLFRIGVLAR----EARFQSSG 129
Query: 235 FPSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
P+++ AY+ GL FA +PC PVL +LG A+ + G LL Y+ G P +
Sbjct: 130 KPATLTGAYIMGLAFAFGWTPCIGPVLGAILGVAASRETVGSGAGLLAIYSLGLAIPFWI 189
Query: 294 AASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
AA F+GA LS FR+ + + G L+ GL
Sbjct: 190 AAGFSGAFMRFLSRFRRHLGTVEKVMGLFLVLTGL 224
>gi|410495368|ref|YP_006905214.1| cytochrome c-type biogenesis protein [Streptococcus dysgalactiae
subsp. equisimilis AC-2713]
gi|410440528|emb|CCI63156.1| K06196 cytochrome c-type biogenesis protein [Streptococcus
dysgalactiae subsp. equisimilis AC-2713]
Length = 293
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 100/217 (46%), Gaps = 29/217 (13%)
Query: 97 FLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYI-------- 148
F Y+ E L LS +A +F AGL++ SPC VLP+ LG +
Sbjct: 45 FRYNKDNLREEL----LMTLSIVLIASVFAAGLLSFFSPCIFPVLPVYLGILLDADDSRT 100
Query: 149 -GAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVM 207
FG I+ ++AF GL+T +LG GA F G + L A L I++
Sbjct: 101 MTIFGKKLYWYGIV-KTLAFIFGLSTIFVILGYGAGFLGNILYAVWFRYFLGA--LVIIL 157
Query: 208 GLNLLEIIELQLPSF-----FDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLAT 262
G++ + I ++ F F N R N A++ GLTF+ +PC PVL++
Sbjct: 158 GIHQMGFITIKSLQFQKSLTFHNNKNRNGLFN------AFILGLTFSFGWTPCVGPVLSS 211
Query: 263 LLGYVATSKD-PLIGGTLLLSYTTGYVAPLLLAASFA 298
+L VA+ + GG L++ YT G P LL SFA
Sbjct: 212 VLALVASGGNGAWQGGVLMIIYTLGLGIPFLL-ISFA 247
>gi|408379660|ref|ZP_11177253.1| cytochrome c-type biogenesis protein [Agrobacterium albertimagni
AOL15]
gi|407746471|gb|EKF57994.1| cytochrome c-type biogenesis protein [Agrobacterium albertimagni
AOL15]
Length = 248
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGY-----IGAFGSGK------SRAQIIGDSIAFSLGLATTL 175
AG ++ LSPC L ++P L Y + F G +R ++ ++ F+LG AT
Sbjct: 14 AGALSFLSPCVLPLVPPYLCYMAGISVDQFREGAQAENAAARRTVMLTALVFTLGFATVF 73
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LG GAS G Q L + I+MGLN L + L L S + R A
Sbjct: 74 VALGAGASTIGGLLRQHMDLLSKIGGVIIIIMGLNFLGVFRLGLLSS----EYRFAGGGK 129
Query: 236 PSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPLLL 293
P+++ AY+ GL FA +PC PVL +LG VA SK+ + G LLL+ Y+ G P +
Sbjct: 130 PATLSGAYVMGLAFAFGWTPCIGPVLGAILG-VAASKETVGDGALLLAIYSLGLAVPFWI 188
Query: 294 AASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
AA F+GA L+ FR+ + G LL+ GL
Sbjct: 189 AAGFSGAFMRFLTRFRRHLGVVEKAMGGLLVLTGL 223
>gi|91204038|emb|CAJ71691.1| similar to thiol:disulfide interchange protein [Candidatus Kuenenia
stuttgartiensis]
Length = 608
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 114/229 (49%), Gaps = 17/229 (7%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSG-----KSRAQIIGDSIAFSLGLA 172
F SL +IF AG+ S +PC ++P+T+ IG +G +S + S+ + LG++
Sbjct: 193 FVSLIIIFLAGVGLSFTPCVYPMIPITVAVIGGQAAGGQATARSPLRAFFLSLIYVLGIS 252
Query: 173 TTLALLGVGASFAGKAYGQIGTGL--PLA---ASGLAIVMGLNLLEIIELQLPSFFDNFD 227
+ +GV A+ G +G T L P + + + +++ + L++PSF +
Sbjct: 253 IVYSAMGVAAASTGALFG---TALQSPWVIGFVVAVFVALAMSMFGVYYLRVPSFISD-- 307
Query: 228 PRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGY 287
R + ++ GL + ASPC P LA+LL Y+A++ + +G +L + G
Sbjct: 308 -RLGTKTGKGIIGVFIMGLVSGIVASPCIGPALASLLVYIASTGNKFMGFWMLFVFAWGL 366
Query: 288 VAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFP 336
L++ +F+GA+++L + + + G LL+G LY +L + P
Sbjct: 367 GVLLIVLGTFSGAIRALPKSGGWMETVERIFGLLLIGAALY-YLSFIIP 414
>gi|424870529|ref|ZP_18294191.1| cytochrome c biogenesis protein [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393166230|gb|EJC66277.1| cytochrome c biogenesis protein [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 249
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 95/214 (44%), Gaps = 16/214 (7%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAF------GSG------KSRAQIIGDSIAFSLGLATT 174
AG ++ LSPC L ++P L Y+ G G R + ++ F+LG AT
Sbjct: 14 AGALSFLSPCVLPLVPPYLCYMAGISVEQFRGGGAVAVAPDVRRGVFFSALLFTLGFATV 73
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
LG GAS G A Q L + IVMGLN L + + + + F A
Sbjct: 74 FVALGAGASSIGMALRQHLDLLSKIGGLIIIVMGLNFLGLFRIGVLAREARFQSSGKPAT 133
Query: 235 FPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
AY+ GL FA +PC PVL +LG A+ + G LL Y+ G P +A
Sbjct: 134 LTG---AYIMGLAFAFGWTPCIGPVLGAILGVAASRETVGSGAGLLAIYSLGLAIPFWIA 190
Query: 295 ASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
A F+GA LS FR+ + + G L+ GL
Sbjct: 191 AGFSGAFMRFLSRFRRHLGTVEKVMGLFLVLTGL 224
>gi|392413638|ref|YP_006450245.1| thiol:disulfide interchange protein [Desulfomonile tiedjei DSM
6799]
gi|390626774|gb|AFM27981.1| thiol:disulfide interchange protein [Desulfomonile tiedjei DSM
6799]
Length = 236
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 20/219 (9%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALL-GVG-- 181
F G +T+++PC L ++PL +G+IG G + + ++ F LG + LA+L VG
Sbjct: 25 FIGGALTAMNPCVLVMVPLLIGFIGGMGEDMTARKSFLFTLVFILGFSVELAVLFSVGLA 84
Query: 182 -ASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
A F Y + + + +++GL+ ++I +QLP D P+ + +
Sbjct: 85 AAPFLQSEY------MVYVVAAICVLLGLHFMDIFHIQLPISQDKL-PK-----YTGYLG 132
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGA 300
A L G F L + PC+ P L ++ + K GG ++L Y G+ +L + AGA
Sbjct: 133 AALFGFMFGLVSLPCTGPALLLIVSVIPV-KGAFFGGVMMLFYGIGHCLLILAVGTSAGA 191
Query: 301 LQSLLSFRKFSS---WINPMSGALLLGGGLYTFLDRLFP 336
+ L+S K + + +GALL G G+Y + LFP
Sbjct: 192 AKHLISSAKMHAANLVLKKAAGALLAGVGIYIAIGALFP 230
>gi|430004544|emb|CCF20343.1| SoxV protein; CcdA-like oxidoreductase; SoxW reductase [Rhizobium
sp.]
Length = 244
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 93/185 (50%), Gaps = 16/185 (8%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGK---------SRAQIIGDSIAFSLGLATTL 175
F AGL++ +SPC L ++P L ++ + R QI+ ++ F LG +T
Sbjct: 10 FLAGLLSFVSPCVLPIVPPYLAWLAGVSFDRLKDSNPGAAERRQIVLSAVFFVLGFSTVF 69
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LG AS GK Q L + A L I+MGL+ L++ ++ L + R A+
Sbjct: 70 VALGATASVIGKTIAQYFDVLSVVAGVLIILMGLHFLKVFQIGL----LYREARVQVASK 125
Query: 236 PSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLL-SYTTGYVAPLLL 293
P+ A++ GL FA +PC PVLA +L +VA + G+LLL +Y+ G P +
Sbjct: 126 PAGFAGAFVMGLAFAFGWTPCVGPVLAAIL-FVAGGEGTAAKGSLLLAAYSLGIGLPFIA 184
Query: 294 AASFA 298
+A FA
Sbjct: 185 SAVFA 189
>gi|429765107|ref|ZP_19297411.1| cytochrome C biogenesis protein transmembrane region [Clostridium
celatum DSM 1785]
gi|429186969|gb|EKY27893.1| cytochrome C biogenesis protein transmembrane region [Clostridium
celatum DSM 1785]
Length = 397
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 108/219 (49%), Gaps = 14/219 (6%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGA------FGSGKSRAQIIGDSIAFSLGLATTLA 176
++F G+++ SPC L +LP+ L + S SR+ ++ ++I F+LG++ T
Sbjct: 8 IVFIEGILSIFSPCILPILPIYLSMLSNSTVNDLKDSKVSRSILLKNTIFFTLGISITFF 67
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
+LG S + + + I+MGL L II+ + S + + A
Sbjct: 68 ILGSSISALSSFLNTNKNIIMIIGGIIIIIMGLFYLGIIKSEFLSKEKRLNINSNAM--- 124
Query: 237 SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
S V A++ G TF+ +PC P+LA++L ++S + +I L+LSY G++ P ++ A
Sbjct: 125 SPVTAFILGFTFSFGWTPCIGPILASVLIMASSSDNIIISNLLILSYIIGFILPFIIVAL 184
Query: 297 FAGALQSLLSFRKFSSW---INPMSGALLLGGGLYTFLD 332
F L F K S+ I +SG +++ GL F +
Sbjct: 185 FYDKL--FKRFDKMKSYMGIIKSISGVIIIIAGLVMFFN 221
>gi|329769293|ref|ZP_08260709.1| hypothetical protein HMPREF0433_00473 [Gemella sanguinis M325]
gi|328839096|gb|EGF88681.1| hypothetical protein HMPREF0433_00473 [Gemella sanguinis M325]
Length = 242
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 15/199 (7%)
Query: 114 SALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGK----------SRAQIIGD 163
SA S T + ++F GL++ LSPC + +LP+ YIG K ++ I +
Sbjct: 6 SAASLTKMGLLFLEGLLSFLSPCVIPILPI---YIGILAGKKEENANGELVFNKKNTITN 62
Query: 164 SIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIEL-QLPSF 222
++ F LG+ T +L SF + L + + L + MGL L + ++ L
Sbjct: 63 TLFFVLGICATFFILAFATSFISVFLNENIKTLQIISGVLIVFMGLLQLGVFKIGFLKQE 122
Query: 223 FDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS 282
F + N + A+L G TF+ + +PC P+LA++ Y A+S ++ L+L
Sbjct: 123 FSAKNKVKRKGNKTTPFLAFLMGFTFSFSWTPCIGPILASVFLY-ASSHTGIMSILLVLV 181
Query: 283 YTTGYVAPLLLAASFAGAL 301
Y G++ P +L A FA L
Sbjct: 182 YCLGFILPFILVAFFASTL 200
>gi|84500982|ref|ZP_00999217.1| putative cytochrome c-type biogenesis protein CcdA [Oceanicola
batsensis HTCC2597]
gi|84391049|gb|EAQ03467.1| putative cytochrome c-type biogenesis protein CcdA [Oceanicola
batsensis HTCC2597]
Length = 249
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 86/188 (45%), Gaps = 8/188 (4%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGA-----FGSGKSRAQIIGDSIAFSLGLATTLALLGVG 181
AG ++ LSPC L ++P + Y+ G G R + + ++ F LGL+T LLG
Sbjct: 21 AGGISFLSPCVLPIVPPYIAYMSGVTLNDLGQGSRRGRALTTAVMFVLGLSTVFLLLGFA 80
Query: 182 ASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQA 241
AS+ G + + A L +V G + L I + F D A + S+ A
Sbjct: 81 ASYVGTLFLRYQGHFNTVAGLLVMVFGAHFLGIYRI---GFLDREARLDAGDHGGSAFGA 137
Query: 242 YLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGAL 301
Y+ GL FA +PC P L +L A+ L G +LL Y G P LL A+F L
Sbjct: 138 YILGLAFAFGWTPCIGPQLGAILSLAASEASVLRGTSLLAVYALGLGVPFLLVAAFLPRL 197
Query: 302 QSLLSFRK 309
L++ K
Sbjct: 198 GGTLAWMK 205
>gi|116750902|ref|YP_847589.1| cytochrome c biogenesis protein transmembrane subunit
[Syntrophobacter fumaroxidans MPOB]
gi|116699966|gb|ABK19154.1| cytochrome c biogenesis protein, transmembrane region
[Syntrophobacter fumaroxidans MPOB]
Length = 235
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 97/189 (51%), Gaps = 5/189 (2%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLAL 177
F +L + F G++ S +PCT ++P+T+ +IG +G SR + SI + LG+A +
Sbjct: 16 FLALLLAFCGGVLASFTPCTYPMMPITVAFIGGKANG-SRWRGFILSIFYVLGMAVIYSA 74
Query: 178 LGVGASFAGKAYGQI--GTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LG A+ +G+ +G + L + + GL +LE + L P+F + + +
Sbjct: 75 LGAFAAMSGQLFGTLTANRWTYLLVGNVCLFFGLAMLEAVPLSPPAFLNRLQVKDMRGH- 133
Query: 236 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
+ + L G AL S C+TP+L LL VAT +D G +L ++ G + +++
Sbjct: 134 -DILTSVLLGGASALVVSTCTTPILGVLLTLVATRQDVAWGIGMLFAFAYGLGSLVIIVG 192
Query: 296 SFAGALQSL 304
+F G L SL
Sbjct: 193 TFTGLLTSL 201
>gi|170758842|ref|YP_001787141.1| cytochrome c-type biogenesis protein [Clostridium botulinum A3 str.
Loch Maree]
gi|169405831|gb|ACA54242.1| putative cytochrome c-type biogenesis protein [Clostridium
botulinum A3 str. Loch Maree]
Length = 228
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 16/191 (8%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLAL 177
F +L + F G+++S SPC LS LPL +GY+ +G + S+ FSLG+ T
Sbjct: 17 FLALLISFLGGIISSFSPCILSSLPLIIGYVNKYGRTDKKIAF-KYSLFFSLGIIITFTS 75
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
LG+ +S GK + G L + + +GL L+ +IE + A P
Sbjct: 76 LGIISSLVGKFFTSGGKLWYLLLGVVMLFVGLQLIGVIE-----------SKNKACKVPK 124
Query: 238 SVQ----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
+ A+ G+ + +SPCSTP+L +L +V + + L+G +LL Y+ G+ ++L
Sbjct: 125 KRKGLLGAFFLGILGGVLSSPCSTPILIAILAFVGSKGNVLLGFLMLLLYSIGHCFVIIL 184
Query: 294 AASFAGALQSL 304
+ + G ++SL
Sbjct: 185 SGTSLGFVESL 195
>gi|18311519|ref|NP_563453.1| hypothetical protein CPE2537 [Clostridium perfringens str. 13]
gi|18146203|dbj|BAB82243.1| probable c-type cytochrome biogenesis protein [Clostridium
perfringens str. 13]
Length = 230
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 112/216 (51%), Gaps = 8/216 (3%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLAL 177
F ++ + F AG+V S S CTLS +PL +GY+ K + S+ FS+GL T +
Sbjct: 16 FLAIILSFFAGVVASFSTCTLSSIPLLIGYVQG-SEVKDNKKAFKYSLIFSIGLGITFTV 74
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
+G+ + GKA+ G + + + I GL +L++I L F D D
Sbjct: 75 IGLLTALIGKAFLGAGKFWYIILAFIMIGSGLQVLDVINL----FGDKKDACKITKKREG 130
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
+ A+ G+ + ASPC+TP++A ++ ++A S + +IG +LL Y+ G+ ++LA +
Sbjct: 131 ILDAFFLGILSGILASPCATPIMAAIIAFIAASGNLVIGMIMLLMYSLGHSVLIILAGTS 190
Query: 298 AGALQSLL---SFRKFSSWINPMSGALLLGGGLYTF 330
G ++ + + +K + + G +++ GLY F
Sbjct: 191 FGLVEKIAYSENGKKIGRVLKNILGTIIILVGLYLF 226
>gi|395766188|ref|ZP_10446765.1| hypothetical protein MCO_01641 [Bartonella sp. DB5-6]
gi|395409698|gb|EJF76284.1| hypothetical protein MCO_01641 [Bartonella sp. DB5-6]
Length = 262
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 90/198 (45%), Gaps = 17/198 (8%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGY-----IGAFGSGKSRAQI------IGDSIAFSLGLA 172
+F AG ++ LSPC L ++P L Y I F S K ++ + IAF LG
Sbjct: 10 VFFAGALSFLSPCVLPLVPPYLCYMAGIVINDFCSEKREGEVFVRRALLSSVIAFVLGFT 69
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
T +LG AS G+ G AA I++GLN L + ++ F + R
Sbjct: 70 TVFVVLGASASTIGRFVGYYRDWFAFAAGVTIIILGLNFLGLFKIA----FLFREARFQT 125
Query: 233 ANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
N P+ + AY+ GL FA +PC P+L ++ T + G LL Y G P
Sbjct: 126 RNMPAGPLGAYVIGLAFAFGWTPCIGPILGPVITLAGTKETVGEGAVLLGIYALGLGVPF 185
Query: 292 LLAASFAGALQSLL-SFR 308
+LAA F+ + L +FR
Sbjct: 186 VLAALFSSSFMKFLGAFR 203
>gi|339504689|ref|YP_004692109.1| cytochrome c-type biogenesis protein SoxV [Roseobacter litoralis
Och 149]
gi|338758682|gb|AEI95146.1| cytochrome c-type biogenesis protein SoxV [Roseobacter litoralis
Och 149]
Length = 246
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 13/212 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG----------SGKSRAQIIGDSIAFSLGLATTLA 176
AGL++ LSPC L ++P L Y+ G ++R + + + F+ G+ T
Sbjct: 12 AGLLSFLSPCILPMVPFYLSYLAGVGMNQISADAQIDSRTRRRAVLAACCFAAGVITIFM 71
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
LG A+ G+ + L A+ + I MGL+ L +I + + + A+
Sbjct: 72 GLGAAATLFGQVVREYFDILRWIAAAIIIAMGLHFLGVIRIGI--LYRQLRADTGGASSV 129
Query: 237 SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
S AY+ GL FA +PC PVLA +L A + G LL Y G AP +LAA
Sbjct: 130 SYAGAYVIGLAFAFGWTPCVGPVLAAILFTAAGADTASTGAWLLFVYGVGMTAPFVLAAL 189
Query: 297 FAGA-LQSLLSFRKFSSWINPMSGALLLGGGL 327
F G ++ + FR+ I G +L+ GL
Sbjct: 190 FIGPFMRWMHRFRRHLGRIEKAMGVMLIVFGL 221
>gi|376261199|ref|YP_005147919.1| cytochrome c biogenesis protein [Clostridium sp. BNL1100]
gi|373945193|gb|AEY66114.1| cytochrome c biogenesis protein [Clostridium sp. BNL1100]
Length = 228
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 12/212 (5%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYI--GAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGA 182
F G++T +SPC L +LP+ Y+ G + K +++++ +SI F +G + +LG A
Sbjct: 11 FTEGILTFISPCLLPMLPIYFIYLAGGNDQNIKPKSRLLINSIGFVIGFSLVFTVLGATA 70
Query: 183 SFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAY 242
+ G L + + IV GLN + I++L + D + + F +S+
Sbjct: 71 TSLGHFLSNHRGLLEKVSGAVMIVFGLNFIGILKLSFINMEKRIDFKFKSLGFITSI--- 127
Query: 243 LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA----SFA 298
+ G+ FA SPC + L + L + SK G LLL ++ G P ++ +
Sbjct: 128 IFGMVFAFGWSPCLSSFLGSALALASNSKTIFEGVFLLLCFSIGLGIPFIITSIIFERVK 187
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGLYTF 330
GA + + +K S IN +SGALL+ G+ F
Sbjct: 188 GAFKQI---QKHSRTINIVSGALLIIAGILVF 216
>gi|153939844|ref|YP_001391074.1| cytochrome c-type biogenesis protein [Clostridium botulinum F str.
Langeland]
gi|384462104|ref|YP_005674699.1| putative cytochrome c-type biogenesis protein [Clostridium
botulinum F str. 230613]
gi|152935740|gb|ABS41238.1| putative cytochrome c-type biogenesis protein [Clostridium
botulinum F str. Langeland]
gi|295319121|gb|ADF99498.1| putative cytochrome c-type biogenesis protein [Clostridium
botulinum F str. 230613]
Length = 228
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 96/189 (50%), Gaps = 16/189 (8%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
+L + F G+++S SPC LS LPL +GY+ +G + S+ FSLG+ T LG
Sbjct: 19 ALLISFLGGIISSFSPCILSSLPLIIGYVNKYGRDDKKTAF-KYSLFFSLGIIITFTSLG 77
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
+ +S GK + G L + I +GL L+ +IE + A P
Sbjct: 78 IISSLVGKFFTSGGKLWYLLLGVVMIFVGLRLIGVIE-----------SKNKACKVPKKR 126
Query: 240 Q----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
+ A+ G+ + +SPCSTP+L +L +V + + L+G +LL Y+ G+ ++L+
Sbjct: 127 KGLLGAFFLGILGGVLSSPCSTPILIAILAFVGSKGNILLGFLMLLLYSIGHCFVIILSG 186
Query: 296 SFAGALQSL 304
+ G ++SL
Sbjct: 187 TSLGFVESL 195
>gi|86751478|ref|YP_487974.1| cytochrome c biogenesis protein, transmembrane region
[Rhodopseudomonas palustris HaA2]
gi|86574506|gb|ABD09063.1| Cytochrome c biogenesis protein, transmembrane region
[Rhodopseudomonas palustris HaA2]
Length = 247
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 105/217 (48%), Gaps = 16/217 (7%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGK-SRA----------QIIGDSIAFSLGLAT 173
FGAG+++ LSPC L ++P L ++ + SR +++G ++AF LG +T
Sbjct: 11 FGAGVLSFLSPCVLPLVPPYLCFLAGVSLDQLSRGSDQPAKAVDWRVVGSAVAFVLGFST 70
Query: 174 TLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAA 233
LG AS GK + L + A + +++GL+ L + + L F A
Sbjct: 71 VFVALGASASVVGKVVTEYFETLAIVAGVVIVILGLHFLGVFRIGLLFREARFHNVRRGA 130
Query: 234 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
F + AY+ GL FA +PC PVLAT+L G LL +Y+ G P LL
Sbjct: 131 GF---LGAYVVGLAFAFGWTPCVGPVLATILLVAGVEGAAARGAALLGAYSLGIGLPFLL 187
Query: 294 AASFAGALQSLLS-FRKFSSWINPMSG-ALLLGGGLY 328
AA F+G L++ R + I + G AL+L G L+
Sbjct: 188 AALFSGGFIRLMARMRAHMATIEKLMGAALVLTGVLF 224
>gi|148379778|ref|YP_001254319.1| cytochrome c-type biogenesis protein [Clostridium botulinum A str.
ATCC 3502]
gi|153933016|ref|YP_001384076.1| cytochrome c-type biogenesis protein [Clostridium botulinum A str.
ATCC 19397]
gi|153935076|ref|YP_001387616.1| cytochrome c-type biogenesis protein [Clostridium botulinum A str.
Hall]
gi|170756804|ref|YP_001781367.1| cytochrome c-type biogenesis protein [Clostridium botulinum B1 str.
Okra]
gi|387818015|ref|YP_005678360.1| putative c-type cytochrome biogenesis protein [Clostridium
botulinum H04402 065]
gi|429247183|ref|ZP_19210449.1| putative c-type cytochrome biogenesis protein [Clostridium
botulinum CFSAN001628]
gi|148289262|emb|CAL83358.1| cytochrome C-type biogenesis protein [Clostridium botulinum A str.
ATCC 3502]
gi|152929060|gb|ABS34560.1| putative cytochrome c-type biogenesis protein [Clostridium
botulinum A str. ATCC 19397]
gi|152930990|gb|ABS36489.1| putative cytochrome c-type biogenesis protein [Clostridium
botulinum A str. Hall]
gi|169122016|gb|ACA45852.1| putative cytochrome c-type biogenesis protein [Clostridium
botulinum B1 str. Okra]
gi|322806057|emb|CBZ03624.1| putative c-type cytochrome biogenesis protein [Clostridium
botulinum H04402 065]
gi|428755773|gb|EKX78378.1| putative c-type cytochrome biogenesis protein [Clostridium
botulinum CFSAN001628]
Length = 228
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 96/189 (50%), Gaps = 16/189 (8%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
+L + F G+++S SPC LS LPL +GY+ +G + S+ FSLG+ T LG
Sbjct: 19 ALLISFLGGIISSFSPCILSSLPLIIGYVNKYGRDDKKTAF-KYSLFFSLGIIITFTSLG 77
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
+ +S GK + G L + I +GL L+ +IE + A P
Sbjct: 78 IISSLVGKFFTSGGKLWYLLLGVVMIFVGLQLIGVIE-----------SKNKACKVPKKR 126
Query: 240 Q----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
+ A+ G+ + +SPCSTP+L +L +V + + L+G +LL Y+ G+ ++L+
Sbjct: 127 KGLLGAFFLGILGGVLSSPCSTPILIAILAFVGSKGNILLGFLMLLLYSIGHCFVIILSG 186
Query: 296 SFAGALQSL 304
+ G ++SL
Sbjct: 187 TSLGFVESL 195
>gi|343520111|ref|ZP_08757081.1| cytochrome C biogenesis protein transmembrane region [Parvimonas
sp. oral taxon 393 str. F0440]
gi|343398652|gb|EGV11184.1| cytochrome C biogenesis protein transmembrane region [Parvimonas
sp. oral taxon 393 str. F0440]
Length = 230
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 113/228 (49%), Gaps = 15/228 (6%)
Query: 107 EAVLGQLSALSFTSLAVIFG--AGLVTSLSPCTLSVLPLTLGYI-GAFGSGKSRAQIIGD 163
E+V+G+ S SF+ A I G++TS+SPC+L+ +PL +G++ G RA I
Sbjct: 6 ESVIGE-SLKSFSIFAPILALLGGILTSISPCSLASIPLIIGFMTGTKEDDTKRAFKI-- 62
Query: 164 SIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFF 223
S+ F++G+A T LGV A+ K + Q G + + I+M L E+I +
Sbjct: 63 SVVFAIGMAITYTTLGVLAALLSKIFNQSGQLWNIFLGIVMILMALQTWEVINVVPSKIL 122
Query: 224 DNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSY 283
N + + A + G+ L +SPCSTP+L LL VA+ L G L L Y
Sbjct: 123 TNKSKKTGY------IGALIVGIMAGLFSSPCSTPILVALLAIVASKGSLLWGVLLFLLY 176
Query: 284 TTGYVAPLLLAAS---FAGALQSLLSFRKFSSWINPMSGALLLGGGLY 328
+ G +++A + F G + S S+ K S + G ++L GLY
Sbjct: 177 SIGNSILVIVAGTSTGFVGKVMSNKSYGKISDIVKIAFGIIILLIGLY 224
>gi|116252059|ref|YP_767897.1| cytochrome c-type biogenesis protein [Rhizobium leguminosarum bv.
viciae 3841]
gi|115256707|emb|CAK07795.1| putative cytochrome c-type biogenesis protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 249
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 101/215 (46%), Gaps = 18/215 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGA-----FGSGKS-------RAQIIGDSIAFSLGLATT 174
AG ++ LSPC L ++P L Y+ F G + R + ++ F+LG AT
Sbjct: 14 AGALSFLSPCVLPLVPPYLCYMAGISVEQFRGGGAVAVAPDIRRGVFFSALLFTLGFATV 73
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
LG GAS G A Q L + IVMGLN L + + + + + R +
Sbjct: 74 FVALGAGASSIGMALRQHLDLLSKIGGLIIIVMGLNFLGLFRIGVLAR----EARFQGSG 129
Query: 235 FPSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
P+++ AY+ GL FA +PC PVL +LG A+ + G LL Y+ G P +
Sbjct: 130 KPATLTGAYIMGLAFAFGWTPCIGPVLGAILGVAASRETVGSGAGLLAIYSLGLAIPFWI 189
Query: 294 AASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
AA F+GA LS FR+ + + G L+ GL
Sbjct: 190 AAGFSGAFMRFLSRFRRHLGTVEKVMGLFLVLTGL 224
>gi|403253875|ref|ZP_10920175.1| cytochrome c biogenesis protein transmembrane region [Thermotoga
sp. EMP]
gi|402810778|gb|EJX25267.1| cytochrome c biogenesis protein transmembrane region [Thermotoga
sp. EMP]
Length = 216
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 21/194 (10%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFA 185
G GL+ SPC L ++P LG + F S ++IG F +G+++ +++GV
Sbjct: 15 GYGLLAFFSPCVLPLIPAFLGVL--FASKGDFLKVIG----FFVGISSLFSVIGV----- 63
Query: 186 GKAYGQIGTGLPL----AASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQA 241
+G G +P SGLA+V+ L + +++L N P +
Sbjct: 64 --LFGLFGNFIPTYILTWISGLALVV-FGLFYLFDVELVKMKKN--PNVWRYKGEGFLNG 118
Query: 242 YLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGAL 301
+L G + L PCS+P+L ++L VA+ ++P+ GG LL Y+ G P +L F L
Sbjct: 119 FLLGGSVGLVWIPCSSPILGSILAIVASGREPVKGGVLLFLYSLGISIPFILMGGFVNKL 178
Query: 302 QSLLSFRKFSSWIN 315
+ +SF+K W+N
Sbjct: 179 LNRVSFKK-PVWMN 191
>gi|386317478|ref|YP_006013642.1| cytochrome c-type biogenesis protein ccdA [Streptococcus
dysgalactiae subsp. equisimilis ATCC 12394]
gi|323127765|gb|ADX25062.1| cytochrome c-type biogenesis protein ccdA [Streptococcus
dysgalactiae subsp. equisimilis ATCC 12394]
Length = 236
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 96/198 (48%), Gaps = 25/198 (12%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYI---------GAFGSGKSRAQIIGDSIA 166
LS +A +F AGL++ SPC VLP+ LG + FG I+ ++A
Sbjct: 3 LSIVLIASVFAAGLLSFFSPCIFPVLPVYLGILLDADDSRTMTIFGKKLYWYGIV-KTLA 61
Query: 167 FSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSF---- 222
F GL+T +LG GA F G + L A L I++G++ + +I ++ F
Sbjct: 62 FIFGLSTIFVILGYGAGFLGNILYAVWFRYLLGA--LVIILGIHQMGLITIKSLQFQKSL 119
Query: 223 -FDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKD-PLIGGTLL 280
F N R N A++ GLTF+ +PC PVL+++L VA+ + GG L+
Sbjct: 120 TFHNNKNRNGLFN------AFILGLTFSFGWTPCVGPVLSSVLALVASGGNGAWQGGVLM 173
Query: 281 LSYTTGYVAPLLLAASFA 298
+ YT G P LL SFA
Sbjct: 174 IIYTLGLGIPFLL-ISFA 190
>gi|209559717|ref|YP_002286189.1| cytochrome C biogenesis protein [Streptococcus pyogenes NZ131]
gi|209540918|gb|ACI61494.1| Cytochrome c-type biogenesis protein [Streptococcus pyogenes NZ131]
Length = 229
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 93/190 (48%), Gaps = 25/190 (13%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGY---------IGAFGSGKSRAQIIGDSIAFSLGLATT 174
+FGAGL++ SPC VLP+ LG I FG I+ ++AF GL+T
Sbjct: 4 VFGAGLLSFFSPCIFPVLPVYLGILLDADDSKTITIFGKKLYWYGIV-KTLAFIFGLSTI 62
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSF-----FDNFDPR 229
+LG GA F G + L A + I++G++ + +I ++ F F N R
Sbjct: 63 FVILGYGAGFLGNILYAVWFRYLLGA--VVIILGIHQMGLITIKSLQFQKSLTFHNNKNR 120
Query: 230 AAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKD-PLIGGTLLLSYTTGYV 288
N A++ GLTF+ +PC PVL+++L VA+ + GG L++ YT G
Sbjct: 121 NGLFN------AFILGLTFSFGWTPCVGPVLSSVLALVASGGNGAWQGGVLMIIYTLGLG 174
Query: 289 APLLLAASFA 298
P LL SFA
Sbjct: 175 IPFLL-ISFA 183
>gi|86139910|ref|ZP_01058475.1| cytochrome c-type biogenesis protein CcdA [Roseobacter sp. MED193]
gi|85823328|gb|EAQ43538.1| cytochrome c-type biogenesis protein CcdA [Roseobacter sp. MED193]
Length = 272
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 128 GLVTSLSPCTLSVLPLTLGYIGAFGSGK------SRAQIIGDSIAFSLGLATTLALLGVG 181
GLV+ LSPC L ++P L Y+ G+ +R ++I ++ F LGL+T LLG
Sbjct: 44 GLVSFLSPCVLPIVPPYLAYMSGVSIGEMQGTEAARRKVILSALFFVLGLSTVFLLLGFT 103
Query: 182 ASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQA 241
ASF G Q A+ + I+ GL+ L + + + D A S V A
Sbjct: 104 ASFFGAFVLQNQEWFARASGVVVIIFGLHFLSVFRIPILDREARVDAGQAGG---SVVGA 160
Query: 242 YLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPLLLAASF 297
Y+ GL FA +PC P L +L +A S+ + GTLLL Y G P LLAA F
Sbjct: 161 YVLGLAFAFGWTPCIGPQLGAILA-LAASEASVSRGTLLLGIYALGLGVPFLLAAIF 216
>gi|397904141|ref|ZP_10505069.1| Cytochrome c biogenesis protein [Caloramator australicus RC3]
gi|343178887|emb|CCC57968.1| Cytochrome c biogenesis protein [Caloramator australicus RC3]
Length = 224
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 86/177 (48%), Gaps = 8/177 (4%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
+ ++F G+ + LSPC L +LP+ L Y+ G K R +I+ +S +F LG LLG
Sbjct: 5 TFGIVFLEGVASFLSPCFLPLLPVYLAYLS--GEAKER-RILRNSFSFILGFTVIFVLLG 61
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
AS GK L I+MGL L+II+ F+ F +
Sbjct: 62 ATASGIGKFLLSHREAFNKTLGILIIIMGLFYLDIIKSSFLMMERKFEFNFKGEGF---L 118
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLI-GGTLLLSYTTGYVAPLLLAA 295
+ +L G+ A +PC P+LA++L +A SK LI G LLL Y+ G P ++ A
Sbjct: 119 KGFLLGVGLAFGWTPCIGPILASVLA-IAASKSSLIYGMVLLLVYSLGIAVPFIIMA 174
>gi|335048514|ref|ZP_08541534.1| cytochrome C biogenesis protein transmembrane region [Parvimonas
sp. oral taxon 110 str. F0139]
gi|333758314|gb|EGL35872.1| cytochrome C biogenesis protein transmembrane region [Parvimonas
sp. oral taxon 110 str. F0139]
Length = 230
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 102/205 (49%), Gaps = 12/205 (5%)
Query: 128 GLVTSLSPCTLSVLPLTLGYI-GAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAG 186
G++TS+SPC+L+ +PL +G++ G RA I S+ F++G+A T LGV A+
Sbjct: 28 GILTSISPCSLASIPLIIGFMTGTKEDDTKRAFKI--SVVFAIGMAITYTTLGVLAALLS 85
Query: 187 KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGL 246
K + Q G + + I+M L EII + N + + A + G+
Sbjct: 86 KIFNQSGQLWNIFLGVVMILMALQTWEIINVVPSKILTNKSKKTGY------IGALIVGI 139
Query: 247 TFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS---FAGALQS 303
L +SPCSTP+L LL VA+ L G L L Y+ G +++A + F G + S
Sbjct: 140 MAGLFSSPCSTPILVALLAIVASKGSLLWGVLLFLLYSIGNSILVIIAGTSTGFVGKVMS 199
Query: 304 LLSFRKFSSWINPMSGALLLGGGLY 328
S+ K S + + G ++L GLY
Sbjct: 200 NKSYGKISDIVKIVFGIIILLIGLY 224
>gi|15643898|ref|NP_228947.1| cytochrome C biogenesis protein [Thermotoga maritima MSB8]
gi|418044699|ref|ZP_12682795.1| cytochrome c biogenesis protein transmembrane region [Thermotoga
maritima MSB8]
gi|4981688|gb|AAD36217.1|AE001771_10 cytochrome C-type biogenesis protein, putative [Thermotoga maritima
MSB8]
gi|351677781|gb|EHA60928.1| cytochrome c biogenesis protein transmembrane region [Thermotoga
maritima MSB8]
Length = 216
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 21/194 (10%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFA 185
G GL+ SPC L ++P LG + F S ++IG F +G+++ +++GV
Sbjct: 15 GYGLLAFFSPCVLPLIPAFLGVL--FASKGDFLKVIG----FFVGISSLFSVIGV----- 63
Query: 186 GKAYGQIGTGLPL----AASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQA 241
+G G +P SGLA+V+ L + +++L N P +
Sbjct: 64 --LFGLFGNFIPTYILTWISGLALVV-FGLFYLFDVELVKMKKN--PNVWRYKGEGFLNG 118
Query: 242 YLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGAL 301
+L G + L PCS+P+L ++L VA+ ++P+ GG LL Y+ G P +L F L
Sbjct: 119 FLLGGSVGLVWIPCSSPILGSILAIVASGREPVKGGVLLFLYSLGISIPFILMGGFVNKL 178
Query: 302 QSLLSFRKFSSWIN 315
+ +SF+K W+N
Sbjct: 179 LNRVSFKK-PVWMN 191
>gi|239623835|ref|ZP_04666866.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239521866|gb|EEQ61732.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 232
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 92/192 (47%), Gaps = 20/192 (10%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS---------RAQIIGDSIAFSLGL 171
L + AGL + SPC + +LP+ YI F SGK+ + ++ S+ F G+
Sbjct: 8 LGTVLVAGLFSFFSPCIIPLLPV---YISLFSSGKTAGDDGTSRRKFRVFLKSVLFVAGI 64
Query: 172 ATTLALLGVGASFAGKAYGQIGTGLPLAASGL-AIVMGLNLLEIIELQLPSFFDNFD-PR 229
+ LLG GA G I + L GL I++GL+ +I ++ D R
Sbjct: 65 SVCFILLGFGAGALGSV---ISSKSFLTVMGLIVIILGLHQTGLIHIKWLYHEKKVDWER 121
Query: 230 AAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVA 289
++ + A+L GLTF+ +PC PVL +LG ATS PL G L+ Y+ G++
Sbjct: 122 TRRGDY---IGAFLLGLTFSFGWTPCIGPVLGAILGLSATSSQPLYGAFLMAVYSLGFLI 178
Query: 290 PLLLAASFAGAL 301
P L + F+ L
Sbjct: 179 PFLALSLFSDTL 190
>gi|23099132|ref|NP_692598.1| holocytochrome c synthase [Oceanobacillus iheyensis HTE831]
gi|22777360|dbj|BAC13633.1| holocytochrome c synthase [Oceanobacillus iheyensis HTE831]
Length = 234
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 103/222 (46%), Gaps = 25/222 (11%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-----------SIAFSLGLAT 173
F AG ++ +SPC L + P+ L YI +G S +I D ++ F +G ++
Sbjct: 10 FSAGFLSFISPCVLPLYPIFLSYI----TGMSMNEITDDNKRMDKKAILHTLCFLIGFSS 65
Query: 174 TLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAA 233
++G +F + + + L I GL ++ ++ + F D +
Sbjct: 66 IFIMIGFTTTFISEFLMTYQATIRQVGAILIIFFGLVIVGVLNFE----FLMKDRKIHFK 121
Query: 234 NFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
N P+ + + L G+ F+L +PC+ P+LA +L AT D IG +++SY G+ P
Sbjct: 122 NRPAGYIGSLLIGMAFSLGWTPCTGPILAIVLSLAATQPD--IGMIMMISYILGFSIPFF 179
Query: 293 LAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
+ A F G L F+K S + + G +++ G+ F D +
Sbjct: 180 VLAFFIGKLT---WFKKHSQLLVKIGGWVMILMGIALFFDWM 218
>gi|403069080|ref|ZP_10910412.1| holocytochrome c synthase [Oceanobacillus sp. Ndiop]
Length = 234
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 111/229 (48%), Gaps = 39/229 (17%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-----------SIAFSLGLAT 173
FGAG ++ +SPC L + P+ L YI +G S +++ D +I F LG ++
Sbjct: 10 FGAGFLSFISPCVLPLYPVFLSYI----TGMSVSELKDDNKKMSKKALIHTICFLLGFSS 65
Query: 174 TLALLGVGASFAG-------KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNF 226
++G ++ QIG L + GL IV LN +++
Sbjct: 66 IFIMIGFTTTYISGFLITYQDIIRQIGAIL-IIFFGLVIVGVLNFDFLMK---------- 114
Query: 227 DPRAAAANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTT 285
D + N P+ V +++ G+ F+L +PC+ P+LA +L AT+ D +G +++SY
Sbjct: 115 DRKIHFKNRPAGFVGSFVIGMAFSLGWTPCTGPILAIVLSLAATNPD--LGMVMMISYIL 172
Query: 286 GYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
G+ P L+ + F G ++ + R+ SS + + G +++ G+ F D +
Sbjct: 173 GFSIPFLVLSLFIGKMKWI---RRHSSLMVKIGGWVMIFMGIALFFDWM 218
>gi|392329668|ref|ZP_10274284.1| putative cytochrome c-type biogenesis protein [Streptococcus canis
FSL Z3-227]
gi|391419540|gb|EIQ82351.1| putative cytochrome c-type biogenesis protein [Streptococcus canis
FSL Z3-227]
Length = 236
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 95/198 (47%), Gaps = 25/198 (12%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGY---------IGAFGSGKSRAQIIGDSIA 166
LS +A +F AGL++ SPC VLP+ LG I FG I+ ++A
Sbjct: 3 LSLVLMASVFAAGLLSFFSPCIFPVLPVYLGILLDADDSRAITIFGKKLYWYGIV-KTLA 61
Query: 167 FSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSF---- 222
F GL+T +LG GA F G L A L I++G++ + +I ++ F
Sbjct: 62 FIFGLSTIFVILGYGAGFLGNILYAAWFRYVLGA--LVIILGIHQMGLITIKSLQFQKSL 119
Query: 223 -FDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKD-PLIGGTLL 280
F N R N A++ GLTF+ +PC PVL+++L VA+ + GG L+
Sbjct: 120 TFHNNKNRNGLLN------AFILGLTFSFGWTPCVGPVLSSVLALVASGGNGAWQGGVLM 173
Query: 281 LSYTTGYVAPLLLAASFA 298
+ YT G P LL SFA
Sbjct: 174 IIYTLGLGIPFLL-ISFA 190
>gi|119386853|ref|YP_917908.1| cytochrome c biogenesis protein, transmembrane region [Paracoccus
denitrificans PD1222]
gi|119377448|gb|ABL72212.1| cytochrome c biogenesis protein, transmembrane region [Paracoccus
denitrificans PD1222]
Length = 245
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 94/184 (51%), Gaps = 15/184 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGK----------SRAQIIGDSIAFSLGLATTLA 176
AGL++ LSPC L ++P L Y+ + +R +++ + AF+LG+ T
Sbjct: 12 AGLLSFLSPCILPMVPFYLSYMAGVSVRELRDGGTVAPGARGRMVLRAWAFALGVTTIFL 71
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
LLG+GA+ GKA+ Q L AA+G+ I+ GL+ L ++ + L + R P
Sbjct: 72 LLGLGATALGKAFAQWKETLSWAAAGVLILFGLHFLGVLRIGL----LYREARVQTGARP 127
Query: 237 SSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
S++ AY+ GL F +PC P LA +L + D GG LL+ Y P +LAA
Sbjct: 128 STLAGAYVMGLAFGFGWTPCVGPALAAILMVASGMGDLWRGGLLLVVYGLAMTLPFVLAA 187
Query: 296 SFAG 299
FAG
Sbjct: 188 FFAG 191
>gi|374308143|ref|YP_005054574.1| cytochrome c-type biogenesis protein CcdA [Filifactor alocis ATCC
35896]
gi|291165775|gb|EFE27823.1| cytochrome c-type biogenesis protein CcdA [Filifactor alocis ATCC
35896]
Length = 417
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 8/225 (3%)
Query: 110 LGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSL 169
+ Q+ + + ++F G+V+ SPC L +LP+ LGY+ + I + + F +
Sbjct: 1 MNQVINVEHFNFLLVFLEGVVSFFSPCILPILPIYLGYLAGQSEKDVKKNKIVNMLFFGV 60
Query: 170 GLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR 229
G+A + +LG+ + GK + + G IV+ L L +I Q S F N + R
Sbjct: 61 GIALSFFILGMAFTGIGKFFDT--NKAMFSRIGGVIVLLLGLYQIGFYQ--SDFLNRERR 116
Query: 230 AAAANFPSSV---QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTG 286
V A L G TF+ A +PC P+L+++L + +K L+G L+ Y G
Sbjct: 117 IKPLWGTGKVGPLVALLMGFTFSFAWTPCVGPMLSSVLIMASGAKTALLGKVLVGVYAVG 176
Query: 287 YVAPLLLAASFAGALQSLLSFR-KFSSWINPMSGALLLGGGLYTF 330
++ P ++ F + + + + + WI + G LL+ GL F
Sbjct: 177 FLIPFVVFGIFTDFIMNFVEKKTRLFQWIPKLGGVLLIVMGLIIF 221
>gi|340754882|ref|ZP_08691615.1| cytochrome c-type biogenesis protein ccdA [Fusobacterium sp. D12]
gi|421501474|ref|ZP_15948437.1| cytochrome C biogenesis protein transmembrane region [Fusobacterium
necrophorum subsp. funduliforme Fnf 1007]
gi|313686448|gb|EFS23283.1| cytochrome c-type biogenesis protein ccdA [Fusobacterium sp. D12]
gi|402265837|gb|EJU15292.1| cytochrome C biogenesis protein transmembrane region [Fusobacterium
necrophorum subsp. funduliforme Fnf 1007]
Length = 217
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 22/218 (10%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGAS 183
++ AGL++ SPC +LP+ Y+G SG R+ I +I F +GL+++ LLG GA
Sbjct: 11 VYLAGLLSFFSPCIFPLLPV---YLGMLSSGGKRS--ILKTIVFVVGLSSSFVLLGFGA- 64
Query: 184 FAGKAYGQIGTGLP----LAASGLAIVM-GLNLLEIIELQLPSFFDNFDPRAAAANFPSS 238
G +G L SG+ +++ GL ++II+ SF + S
Sbjct: 65 ------GSVGALLTSNTFRVISGVVVILFGLIQMDIIK---ASFLERTKLVELKKKEEDS 115
Query: 239 VQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
+ A+L G TF+L +PC P+L ++L + +P+ G ++ Y G P LL + F
Sbjct: 116 ILGAFLLGFTFSLGWTPCVGPILTSILFLSSGGGNPVYGALMMFIYVLGLATPFLLFSFF 175
Query: 298 AGAL-QSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
+ L + + SFRK+ + + G L++ G+ D+L
Sbjct: 176 SEQLGRKMGSFRKYLIPLKRVGGVLIVFMGILLLTDKL 213
>gi|182415866|ref|YP_001820932.1| cytochrome c biogenesis protein transmembrane protein [Opitutus
terrae PB90-1]
gi|177843080|gb|ACB77332.1| cytochrome c biogenesis protein transmembrane region [Opitutus
terrae PB90-1]
Length = 231
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 99/201 (49%), Gaps = 13/201 (6%)
Query: 133 LSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQI 192
LSPC L+ +PL +G+I R Q +G ++ F+LG+ ++A +G + AG+ G I
Sbjct: 33 LSPCHLASIPLVVGFIAQRDETLPR-QALGVALLFALGILVSIAAIGGVTAAAGRMLGDI 91
Query: 193 GTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAA 252
G + + + +GL+LL L+LP ++ A + A+L GL F LA
Sbjct: 92 GPWTGYLVAAVLVAVGLHLLG--WLKLP-----WERTMALPRYQGPAAAFLLGLVFGLAL 144
Query: 253 SPCSTPVLATLLGYV--ATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFR-- 308
PC+ LA +LG V PL L+L+Y G+ ++ A F +Q +L +
Sbjct: 145 GPCTFAYLAPVLGVVFGVARAQPLFAALLVLAYGLGHCVLIVAAGVFTQKVQRVLDWHGA 204
Query: 309 -KFSSWINPMSGALLLGGGLY 328
+ + W+ SG L+L G +
Sbjct: 205 SRGAVWLRRSSGVLVLVGATW 225
>gi|422759457|ref|ZP_16813219.1| putative cytochrome c-type biogenesis protein [Streptococcus
dysgalactiae subsp. dysgalactiae ATCC 27957]
gi|322412292|gb|EFY03200.1| putative cytochrome c-type biogenesis protein [Streptococcus
dysgalactiae subsp. dysgalactiae ATCC 27957]
Length = 236
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 96/198 (48%), Gaps = 25/198 (12%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYI---------GAFGSGKSRAQIIGDSIA 166
LS +A +F AGL++ SPC VLP+ LG + FG I+ ++A
Sbjct: 3 LSIVLIASVFAAGLLSFFSPCIFPVLPVYLGILLDADDSRTMTIFGKKLYWYGIV-KTLA 61
Query: 167 FSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSF---- 222
F GL+T +LG GA F G + L A L I++G++ + +I ++ F
Sbjct: 62 FIFGLSTIFVILGYGAGFLGNILYAVWFRYLLGA--LVIILGIHQVGLITIKRLQFQKSL 119
Query: 223 -FDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKD-PLIGGTLL 280
F N R N A++ GLTF+ +PC PVL+++L VA+ + GG L+
Sbjct: 120 TFHNDKNRNGLLN------AFILGLTFSFGWTPCVGPVLSSVLALVASGGNGAWQGGLLM 173
Query: 281 LSYTTGYVAPLLLAASFA 298
+ YT G P LL SFA
Sbjct: 174 IVYTLGLGIPFLL-LSFA 190
>gi|410671266|ref|YP_006923637.1| c-type cytochrome biogenesis protein [Methanolobus psychrophilus
R15]
gi|409170394|gb|AFV24269.1| c-type cytochrome biogenesis protein [Methanolobus psychrophilus
R15]
Length = 217
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 97/213 (45%), Gaps = 28/213 (13%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASF 184
F AG+V+ LSPC L +LP+ L Y + G GK R A +GL+ + L+GV AS
Sbjct: 14 FFAGIVSVLSPCVLPLLPIILAY--SAGEGKFR------PFAIVIGLSLSFTLMGVVASA 65
Query: 185 AGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQA--- 241
G + G + A L IV GL +L ++D A + ++
Sbjct: 66 FGAVFQSYIQGFRILAELLIIVFGLAMLM-----------DYDLFGTFARYSGNLHVEKK 114
Query: 242 -----YLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
L G + + PC P+L +L VA D G T L+ Y+ G+ P+L+ A
Sbjct: 115 GIFGGLLVGASLGIVWIPCVGPILGAILTSVAIQGDITYGTTHLIIYSMGFAVPMLIIAY 174
Query: 297 FAGALQSLLS-FRKFSSWINPMSGALLLGGGLY 328
FA S LS K+ + ++G +L+ GL+
Sbjct: 175 FANLSSSKLSEISKYDVKLKKLTGLVLVLAGLW 207
>gi|257125115|ref|YP_003163229.1| cytochrome c biogenesis protein transmembrane protein [Leptotrichia
buccalis C-1013-b]
gi|257049054|gb|ACV38238.1| cytochrome c biogenesis protein transmembrane region [Leptotrichia
buccalis C-1013-b]
Length = 212
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 21/216 (9%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGAS 183
+F G+ + LSPC L ++P+ Y+G GK ++ F LGL+ T +G S
Sbjct: 11 VFLGGVASFLSPCILPIVPV---YLGILSKGKKTVL---NTFLFILGLSLTFVSIGFSFS 64
Query: 184 FAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP-----SS 238
F + + + A L I++GL+ I++ NF + + N SS
Sbjct: 65 FLTGIF--FNDTIKVLAGILVIILGLHQTGILKF-------NFLEKNKSVNLDLIEKNSS 115
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFA 298
+QA+L GLTF+L +PC P+LA++L + GG ++ Y G P +L + F+
Sbjct: 116 LQAFLLGLTFSLGWTPCVGPILASVLTLAGEKGSAVYGGLMMFIYVLGLATPFVLFSFFS 175
Query: 299 GA-LQSLLSFRKFSSWINPMSGALLLGGGLYTFLDR 333
L+ + + +++++ G L++ G+ +++
Sbjct: 176 QELLKKVRTLNQYTNYFKIFGGFLIIFMGILLIMNK 211
>gi|338536205|ref|YP_004669539.1| thiol:disulfide interchange protein DsbD [Myxococcus fulvus HW-1]
gi|337262301|gb|AEI68461.1| thiol:disulfide interchange protein DsbD [Myxococcus fulvus HW-1]
Length = 480
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 14/219 (6%)
Query: 122 AVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGS-GKSRAQIIGDSIAFSLGLATTLALLGV 180
AV+F GL+T+L+PC ++P+T+ GA + G+ R+ ++ S + +G+ + LGV
Sbjct: 48 AVVFAGGLLTALTPCVYPLIPITVSVFGARKTEGRGRSLLLTSS--YIVGMGVVFSALGV 105
Query: 181 GASFAGKAYGQIGTGLPLAASGLAI---VMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
A+ G+A+G + G P +GLA+ ++ ++ EL LPS A
Sbjct: 106 LAAKTGQAFGSM-LGHPAVVTGLAVFLLLLATSMFGAFELALPSSLQTKLNDVGGAGV-- 162
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
A+L G A+PC+ PVL LL +VA S + +G +LL Y G P L F
Sbjct: 163 -AGAFLMGSVSGFLAAPCTGPVLTGLLAFVAKSANTTLGASLLFVYALGIGVPFFLIGVF 221
Query: 298 AGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFP 336
L + W+ + G +L+ +++L FP
Sbjct: 222 T---VRLPRGGVWMEWVKSVLGIMLVALA-FSYLKDAFP 256
>gi|210621603|ref|ZP_03292716.1| hypothetical protein CLOHIR_00661 [Clostridium hiranonis DSM 13275]
gi|210154668|gb|EEA85674.1| hypothetical protein CLOHIR_00661 [Clostridium hiranonis DSM 13275]
Length = 424
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 112/228 (49%), Gaps = 23/228 (10%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGY----IGAFGSGKSRAQIIGDSIAFSLGLATTLA 176
L +F G+++ SPC L ++PL LGY I ++ ++I ++I F+LG++ +
Sbjct: 11 LITVFLQGVLSFTSPCILPLIPLYLGYLSGGINQEDGSYNKKKLIINTIFFTLGISLSFF 70
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGL---------NLLEIIELQLPSFFDNFD 227
++G+G S + + + G + + I+ GL NLLE E +LP D
Sbjct: 71 IMGLGVSALKEFFAEYGGIISKIGGVIMILFGLYQLGIFKRSNLLES-EHKLPFKMD--- 126
Query: 228 PRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGY 287
+ A S + A + G TF+ A +PC PVL ++L +++ + G L+ Y+ G+
Sbjct: 127 -KIAL----SPITAIIFGFTFSFAWTPCIGPVLTSVLIMAGSAETRIKGFMLIGVYSAGF 181
Query: 288 VAPLLLAASFAGALQSLL-SFRKFSSWINPMSGALLLGGGLYTFLDRL 334
+ P LL F L +L+ ++ + + L++ GL+ F +L
Sbjct: 182 IIPFLLLGIFTTQLMNLIKKYKNIVKYTVKIGAFLMIVMGLFVFSGKL 229
>gi|315917679|ref|ZP_07913919.1| cytochrome c-type biogenesis protein ccdA [Fusobacterium
gonidiaformans ATCC 25563]
gi|313691554|gb|EFS28389.1| cytochrome c-type biogenesis protein ccdA [Fusobacterium
gonidiaformans ATCC 25563]
Length = 217
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 12/213 (5%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGAS 183
++ AGL++ SPC +LP+ Y+G SG R+ + +I F +GL+++ LLG GA
Sbjct: 11 VYLAGLLSFFSPCIFPLLPV---YLGMLSSGGKRSLL--KTIVFVIGLSSSFVLLGFGAG 65
Query: 184 FAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ-AY 242
G + + ++ + I+ G +++I+ SF + SV A+
Sbjct: 66 SVGALLTS--STFRIISAIIVILFGFIQMDVIK---ASFLERTKLVELKQKEEDSVLGAF 120
Query: 243 LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQ 302
+ G TF+L +PC P+L ++L + P+ G ++ Y G P L+ + F+ L
Sbjct: 121 ILGFTFSLGWTPCVGPILTSILFLSSGGGSPVYGALMMFIYVLGLATPFLIFSFFSKQLG 180
Query: 303 SLL-SFRKFSSWINPMSGALLLGGGLYTFLDRL 334
S + SFRK+ + + G L++ G+ DRL
Sbjct: 181 SKMGSFRKYLVPLKKIGGVLIVIMGILLLTDRL 213
>gi|95930552|ref|ZP_01313287.1| cytochrome c biogenesis protein, transmembrane region
[Desulfuromonas acetoxidans DSM 684]
gi|95133387|gb|EAT15051.1| cytochrome c biogenesis protein, transmembrane region
[Desulfuromonas acetoxidans DSM 684]
Length = 232
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 105/202 (51%), Gaps = 21/202 (10%)
Query: 133 LSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQI 192
LSPC L+ +PL +G+I RA I+ + F++G+ ++AL+GV + AG+ G +
Sbjct: 34 LSPCHLASIPLIVGFIDGQQISTRRAFIVSN--LFAVGILLSIALIGVITALAGRMLGDL 91
Query: 193 GTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLA----GLTF 248
G+ + + +V GL+LL ++ + P + +S + LA GL F
Sbjct: 92 GSYGNWLVAAIFLVFGLHLLGVLPM----------PWSGPGTIHTSRRGLLAAFTMGLIF 141
Query: 249 ALAASPCSTPVLATLLGYV-ATSKDPLIGG-TLLLSYTTGYVAPLLLAASFAGALQSLLS 306
+A PC+ + +LG A + D LI +LLL+Y G+ + ++LA +F +QS L+
Sbjct: 142 GIALGPCTFAFMGPVLGVAFAEANDHLIYAISLLLAYGMGHCSVIVLAGTFTEIVQSYLN 201
Query: 307 FRKFSS---WINPMSGALLLGG 325
+ + S W+ + G L++ G
Sbjct: 202 WNETSQGTLWLKRICGVLVIAG 223
>gi|417752212|ref|ZP_12400437.1| cytochrome C biogenesis protein transmembrane region [Streptococcus
dysgalactiae subsp. equisimilis SK1249]
gi|333772008|gb|EGL48896.1| cytochrome C biogenesis protein transmembrane region [Streptococcus
dysgalactiae subsp. equisimilis SK1249]
Length = 236
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 95/198 (47%), Gaps = 25/198 (12%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYI---------GAFGSGKSRAQIIGDSIA 166
LS +A +F AGL++ SPC VLP+ LG + FG I+ ++A
Sbjct: 3 LSIVLIASVFAAGLLSFFSPCIFPVLPVYLGILLDADDSRTMTIFGKKLYWYGIV-KTLA 61
Query: 167 FSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSF---- 222
F GL+T +LG GA F G + L A L I++G++ + I ++ F
Sbjct: 62 FIFGLSTIFVILGYGAGFLGNILYAVWFRYFLGA--LVIILGIHQMGFITIKSLQFQKSL 119
Query: 223 -FDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKD-PLIGGTLL 280
F N R N A++ GLTF+ +PC PVL+++L VA+ + GG L+
Sbjct: 120 TFHNNKNRNGLFN------AFILGLTFSFGWTPCVGPVLSSVLALVASGGNGAWQGGVLM 173
Query: 281 LSYTTGYVAPLLLAASFA 298
+ YT G P LL SFA
Sbjct: 174 IIYTLGLGIPFLL-ISFA 190
>gi|148270726|ref|YP_001245186.1| cytochrome c biogenesis protein, transmembrane region [Thermotoga
petrophila RKU-1]
gi|170289450|ref|YP_001739688.1| cytochrome c biogenesis transmembrane protein [Thermotoga sp. RQ2]
gi|147736270|gb|ABQ47610.1| cytochrome c biogenesis protein, transmembrane region [Thermotoga
petrophila RKU-1]
gi|170176953|gb|ACB10005.1| cytochrome c biogenesis protein transmembrane region [Thermotoga
sp. RQ2]
Length = 216
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 21/194 (10%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFA 185
G G + SPC L ++P LG + F S +IIG F +G+++ +++GV
Sbjct: 15 GYGFLAFFSPCVLPLIPAFLGVL--FASKGDFLKIIG----FFVGISSLFSVIGV----- 63
Query: 186 GKAYGQIGTGLPL----AASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQA 241
+G G +P SGLA+V+ L + +++L N P +
Sbjct: 64 --LFGLFGNFIPTYILTWISGLALVV-FGLFYLFDVELVKMKKN--PNVWRYKGEGFLNG 118
Query: 242 YLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGAL 301
+L G + L PCS+P+L ++L VA+ ++P+ GG LL Y+ G P +L F L
Sbjct: 119 FLLGGSVGLVWIPCSSPILGSILAIVASGREPVKGGVLLFLYSLGISIPFILMGGFVNRL 178
Query: 302 QSLLSFRKFSSWIN 315
+ +SF+K W+N
Sbjct: 179 LNRVSFKK-PVWMN 191
>gi|226949060|ref|YP_002804151.1| putative cytochrome c-type biogenesis protein [Clostridium
botulinum A2 str. Kyoto]
gi|226840810|gb|ACO83476.1| putative cytochrome c-type biogenesis protein [Clostridium
botulinum A2 str. Kyoto]
Length = 228
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 95/189 (50%), Gaps = 16/189 (8%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
+L + F G+++S SPC LS LPL +GY+ +G + S+ FSLG+ T LG
Sbjct: 19 ALLISFLGGIISSFSPCILSSLPLIIGYVNKYGRDDKKTAF-KYSLFFSLGIIITFTSLG 77
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
+ +S GK + G L I +GL L+ +IE + A P
Sbjct: 78 IISSLVGKFFTSGGKLWYLLLGVAMIFVGLQLIGVIE-----------SKNKACKVPKKR 126
Query: 240 Q----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
+ A+ G+ + +SPCSTP+L +L +V + + L+G +LL Y+ G+ ++L+
Sbjct: 127 KGLLGAFFLGILGGVLSSPCSTPILIAILAFVGSKGNILLGFLMLLLYSIGHCFVIILSG 186
Query: 296 SFAGALQSL 304
+ G ++SL
Sbjct: 187 TSLGFVESL 195
>gi|89054889|ref|YP_510340.1| cytochrome c biogenesis protein, transmembrane protein [Jannaschia
sp. CCS1]
gi|88864438|gb|ABD55315.1| cytochrome c biogenesis protein transmembrane protein [Jannaschia
sp. CCS1]
Length = 251
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 100/216 (46%), Gaps = 11/216 (5%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFG----SGKSRA---QIIGDSIAFSLGLA 172
++ V AG+++ LSPC L ++P L Y+G G++RA + I ++ F +GL+
Sbjct: 14 AMLVALAAGVLSFLSPCVLPIVPPYLAYMGGITMSDIEGEARAARRKAIMPALFFVMGLS 73
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
T LG AS G+ + Q L + + I+ GL+ L I + L D A
Sbjct: 74 TVFIFLGFTASVLGQFFLQNQILLARISGAVVIIFGLHFLGFIRIPL---LDREARLDAG 130
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
S++ AY+ GL FA +PC P L +L A G LL Y G P L
Sbjct: 131 DKGGSTLGAYVLGLAFAFGWTPCIGPQLGAILSIAAQESSVQRGTMLLGVYAVGLGLPFL 190
Query: 293 LAASFAGALQSLL-SFRKFSSWINPMSGALLLGGGL 327
LAA+F Q L+ ++ I + G LL+ G+
Sbjct: 191 LAAAFIDRAQGLMGCMKRHMKLIERVMGVLLVAVGV 226
>gi|392961719|ref|ZP_10327173.1| cytochrome c biogenesis protein transmembrane region [Pelosinus
fermentans DSM 17108]
gi|421055632|ref|ZP_15518594.1| cytochrome c biogenesis protein transmembrane region [Pelosinus
fermentans B4]
gi|421072582|ref|ZP_15533691.1| cytochrome c biogenesis protein transmembrane region [Pelosinus
fermentans A11]
gi|392439397|gb|EIW17108.1| cytochrome c biogenesis protein transmembrane region [Pelosinus
fermentans B4]
gi|392445782|gb|EIW23093.1| cytochrome c biogenesis protein transmembrane region [Pelosinus
fermentans A11]
gi|392453286|gb|EIW30167.1| cytochrome c biogenesis protein transmembrane region [Pelosinus
fermentans DSM 17108]
Length = 241
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 107/222 (48%), Gaps = 11/222 (4%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSL-------GL 171
+L F AG ++ LSPC L +LP + ++ SGK + + ++ F L GL
Sbjct: 6 VTLVTAFIAGTISFLSPCVLPLLPTYMAFLTGAESGKLQDDNLVNTWPFLLRISCFLSGL 65
Query: 172 ATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAA 231
+ ++G AS+ G+ + + + ++MG++LL I++L+ + P
Sbjct: 66 SLVFIMMGATASYFGQLFLDYQDAIRQIGAIFMVIMGIHLLGIVKLEWLE--REYRP-LL 122
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAP- 290
F + A++ G+ F +PC+ P+LA++L Y +T+ G LL Y+ G+ P
Sbjct: 123 QHTFQGPIGAFILGVAFTAGWTPCTGPILASILVYASTTITLSQGAFLLFVYSLGFSVPF 182
Query: 291 LLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLD 332
LL+A F + K+ ++ +SG +L+ G+ + +
Sbjct: 183 LLMALFFKNYFFRIKVVMKWLPYLQGLSGVMLIIIGIMLYFN 224
>gi|374308627|ref|YP_005055058.1| cytochrome c-type biogenesis protein CcdA [Filifactor alocis ATCC
35896]
gi|291166954|gb|EFE29000.1| cytochrome c-type biogenesis protein CcdA [Filifactor alocis ATCC
35896]
Length = 237
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 116/233 (49%), Gaps = 27/233 (11%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQI------IGDSIA---FSLGLATT 174
+F AG+++ +PCT ++P+ +G + + +I +G I F LGL+T+
Sbjct: 11 VFIAGILSFFAPCTFPLIPIYIGLLTDSEHEYKKIRIKNTEWNVGAMIKTGTFVLGLSTS 70
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASG-LAIVMGLNLLEIIELQLPSFFDNFDPRAAAA 233
+LG GA F GK I L A+G L +++G++ ++++ ++ FD+
Sbjct: 71 FIILGFGAGFLGK---WISNQWVLFAAGFLVVLLGIHQMDLVHIKK---FDSLKGVQFKN 124
Query: 234 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
+ ++ YL G++F+L +PC P+L +L A+S L G L++ Y+ G + P L+
Sbjct: 125 SKTKALGTYLMGVSFSLGWTPCVGPILGAVLVTSASSGQELYGAFLMMIYSVGLMIPFLI 184
Query: 294 AA--------SFAGALQSLLSFRKFSSWINPMSGALLLGGGLYT---FLDRLF 335
A F+ + ++ ++ + + G +L+G L + F ++LF
Sbjct: 185 MAIASEFVMKRFSFFEKHIIGIKRAGGVLVAIMGLMLMGNQLVSLTVFFEKLF 237
>gi|254488089|ref|ZP_05101294.1| cytochrome c biogenesis protein [Roseobacter sp. GAI101]
gi|214044958|gb|EEB85596.1| cytochrome c biogenesis protein [Roseobacter sp. GAI101]
Length = 246
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 98/212 (46%), Gaps = 13/212 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGK----------SRAQIIGDSIAFSLGLATTLA 176
AGL++ LSPC L ++P L Y+ G + R + + ++ F+ G+ T
Sbjct: 12 AGLLSFLSPCILPIVPFYLSYLAGVGMNQITVDGPIQSGVRGRAVVAALFFAAGVITIFM 71
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
LG AS G+ L A+ + I MGL+ L +I + + F A
Sbjct: 72 GLGAAASSFGQVVRDYFDILRWIAAAIIIAMGLHFLGVIRIGF--LYRQFRADAGDTKAT 129
Query: 237 SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
S + AY+ GL FA +PC PVLA +L A + G LL +Y G AP +LAA
Sbjct: 130 SLLGAYVIGLAFAFGWTPCVGPVLAAILFTAAGTDTATSGALLLFTYGVGMTAPFVLAAL 189
Query: 297 FAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
F G ++ FR+ + + GALL+ GL
Sbjct: 190 FIGPFMRFMARFRRHLGTVEKVMGALLVIFGL 221
>gi|392393402|ref|YP_006430004.1| cytochrome c biogenesis protein [Desulfitobacterium dehalogenans
ATCC 51507]
gi|390524480|gb|AFM00211.1| cytochrome c biogenesis protein [Desulfitobacterium dehalogenans
ATCC 51507]
Length = 223
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 3/187 (1%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGA 182
++F G++T +SPC L +LP+ + Y GS + + +++ F LG LG A
Sbjct: 5 LLFLEGIITFISPCLLPMLPIYISYFAGQGSDDKTMRTLTNALGFVLGFTLVFVTLGAFA 64
Query: 183 SFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAY 242
G + + G+ L + IV GLN + +I + + + + F SS+
Sbjct: 65 GTLGGFFREYNQGINLVTGLIVIVFGLNFMGVIRIPFLNINRQINMKIVNLGFFSSL--- 121
Query: 243 LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQ 302
L G+ F++ +PC L + L + AT + L G +LL ++ G P + +A L+
Sbjct: 122 LFGIIFSIGWTPCVGAFLGSALMFAATEGESLKGILMLLCFSLGLGIPFVASALLIERLK 181
Query: 303 SLLSFRK 309
S L F K
Sbjct: 182 STLGFIK 188
>gi|421525459|ref|ZP_15972069.1| cytochrome C-type biogenesis protein ccdA [Fusobacterium nucleatum
ChDC F128]
gi|402258028|gb|EJU08500.1| cytochrome C-type biogenesis protein ccdA [Fusobacterium nucleatum
ChDC F128]
Length = 218
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 96/187 (51%), Gaps = 18/187 (9%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAG 186
AG+ + SPC ++P+ YI +G+ ++ + ++AF LGL+ T +LG GA F G
Sbjct: 14 AGVASFFSPCIFPIIPV---YISILSNGEKKS--VSKTLAFVLGLSVTYIILGFGAGFIG 68
Query: 187 KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQA----Y 242
+ + + + + + L +++GL +E+++L+ F + N+ Q+ +
Sbjct: 69 ELF--LNSKVRVIGGILVVILGLFQMEVLKLK-------FLEKTKVMNYEGEEQSLFSTF 119
Query: 243 LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQ 302
L GLTF+L +PC P+LA++L +S D L++ Y G P ++ + + L
Sbjct: 120 LLGLTFSLGWTPCVGPILASILILAGSSGDTGNSVMLMVLYLLGMATPFVIFSLASKTLF 179
Query: 303 SLLSFRK 309
+SF K
Sbjct: 180 KKMSFIK 186
>gi|261405926|ref|YP_003242167.1| cytochrome c biogenesis transmembrane protein [Paenibacillus sp.
Y412MC10]
gi|329924783|ref|ZP_08279772.1| cytochrome C-type biogenesis protein CcdA [Paenibacillus sp. HGF5]
gi|261282389|gb|ACX64360.1| cytochrome c biogenesis protein transmembrane region [Paenibacillus
sp. Y412MC10]
gi|328940448|gb|EGG36771.1| cytochrome C-type biogenesis protein CcdA [Paenibacillus sp. HGF5]
Length = 237
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 108/235 (45%), Gaps = 25/235 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAF---------GSGKSRAQIIGDSIAFSLG 170
++ + F AG + +SPC L + P L I + R + + ++AF LG
Sbjct: 5 NIGIAFAAGFASFISPCCLPLYPSYLSIITGMSVNDLKNEQNRKEVRFRTMTHTLAFILG 64
Query: 171 LATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRA 230
+ LG GA G+ + + + ++ L IVMGL L+ I + F +
Sbjct: 65 FSAVYYTLGWGAGLFGEFFTEYQDLIRQLSALLIIVMGLMLIGIFQ-------PKFLMKD 117
Query: 231 AAANFPSS----VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTG 286
NF S + +L G+ FA SPC P+L ++ A+ DP L+ SY+ G
Sbjct: 118 RKFNFKSKPTGYIGTFLFGIGFAAGWSPCVGPILTAIIALAAS--DPGTWFPLITSYSLG 175
Query: 287 YVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFPTTMAM 341
+ P + A F G+ + +L K+SS + + G L++ G+ F D+++ T+ +
Sbjct: 176 FAVPFFILAFFIGSTRWIL---KYSSTLMKVGGVLMILMGVLLFTDQMYKITIWL 227
>gi|383454458|ref|YP_005368447.1| thiol:disulfide interchange protein DsbD [Corallococcus coralloides
DSM 2259]
gi|380732523|gb|AFE08525.1| thiol:disulfide interchange protein DsbD [Corallococcus coralloides
DSM 2259]
Length = 475
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 12/217 (5%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGA 182
V+F GL+T+++PC ++P+T+ GA ++R + + + A+ +G+ + LG+ A
Sbjct: 49 VVFAGGLLTAMTPCVYPLIPITVSVFGA-RKAEARGRSLALTTAYIVGMGVVFSALGILA 107
Query: 183 SFAGKAYGQIGTGLPLAASGLAIVMGL---NLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
+ G+A+G + G P+ GLA+ + L ++ EL LPS + + +
Sbjct: 108 AKTGQAFGSM-LGSPVVVVGLAVFLLLLASSMFGAFELALPS---SMQTKLSNVGGTGIA 163
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
A++ G A+PC+ PVL LL +VA S + +G TLL Y G P L F
Sbjct: 164 GAFVMGSVSGFLAAPCTGPVLTGLLAFVAKSANTTLGATLLFIYALGIGVPFFLIGVFT- 222
Query: 300 ALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFP 336
L + W+ + G +L+ +++L FP
Sbjct: 223 --VRLPRGGVWMEWVKSVLGIMLVALA-FSYLKDAFP 256
>gi|323701186|ref|ZP_08112861.1| cytochrome c biogenesis protein transmembrane region
[Desulfotomaculum nigrificans DSM 574]
gi|323533788|gb|EGB23652.1| cytochrome c biogenesis protein transmembrane region
[Desulfotomaculum nigrificans DSM 574]
Length = 230
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 102/227 (44%), Gaps = 19/227 (8%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAF-----GSGKSRAQIIGDSIAFSLGLAT 173
TSL F AG+++ SPC + +LP+ I G +S I F+ G
Sbjct: 5 TSLWAAFLAGILSFFSPCMIPLLPVYTSQIATTITENNGHNRSSWGISLQVFIFTTGFVL 64
Query: 174 TLALLGVGASFAGKAYGQIGTGLPLAASGL-AIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
G+ + F G + I + L G+ I+MGLNLL + ++ LP R
Sbjct: 65 VFVGFGIASGFLGN-FLDINQIMLLKIGGIFVILMGLNLLGLFKISLPV-----RHRVTR 118
Query: 233 ANFPSS--VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAP 290
N P + ++ G++ ALA +PC PVL ++L T+ G LL+SY G P
Sbjct: 119 GNTPKKKYITSFFLGISLALAWAPCVGPVLVSVLTVAVTTNSSKAGSVLLISYALGMAIP 178
Query: 291 LL---LAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
LL L LQ +L +++S +SG L+ GL + DRL
Sbjct: 179 LLALCLMFDRFPRLQRVL--KRYSGISLKISGLFLIMLGLLMYFDRL 223
>gi|433463860|ref|ZP_20421391.1| cytochrome c-type biogenesis protein CcdA [Halobacillus sp.
BAB-2008]
gi|432186934|gb|ELK44300.1| cytochrome c-type biogenesis protein CcdA [Halobacillus sp.
BAB-2008]
Length = 234
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 24/210 (11%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAF-------GSGKSRAQIIGDSIAFSLGLATTLAL 177
FGAG ++ +SPC + P L YI +G + + + ++ F LG T +
Sbjct: 10 FGAGFLSFISPCVFPLYPAFLSYITGMSVHELKEDNGMLKRRSLLHTVLFLLGFTTIFLI 69
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
LG SF G+ Q + + + L I G ++ + + F D + A N PS
Sbjct: 70 LGFSGSFIGQFLIQNESVIRRLGAILIIFFGFVIIGVFNFR----FLMKDRKIAFKNRPS 125
Query: 238 SVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
++L GL F+L +PC+ P+LA +L A S D + ++++Y+ G+ P LL +
Sbjct: 126 GYAGSFLIGLAFSLGWTPCTGPILAGVLSLAADSPDLFL--VMMVAYSLGFSIPFLLLSF 183
Query: 297 FAGALQSLLSFRKFSSWINPMSGALLLGGG 326
F G L WI S ++ GG
Sbjct: 184 FVGKL----------GWIKRHSAGIVKAGG 203
>gi|115525086|ref|YP_781997.1| cytochrome c biogenesis protein, transmembrane region
[Rhodopseudomonas palustris BisA53]
gi|115519033|gb|ABJ07017.1| cytochrome c biogenesis protein, transmembrane region
[Rhodopseudomonas palustris BisA53]
Length = 247
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 105/226 (46%), Gaps = 16/226 (7%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFG-----------SGKSRAQIIGDS 164
+S S A GAG+++ LSPC L ++P L ++ G+ +++ +
Sbjct: 2 ISNISFAGALGAGVLSFLSPCVLPLVPPYLCFLAGVSLDDLAAREGQSGGRPNGRVVASA 61
Query: 165 IAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFD 224
+AF LG +T LG AS GKA L + A ++MGL+ L + + L
Sbjct: 62 VAFVLGFSTVFVALGASASALGKAVTAHFDTLGIIAGVAIVIMGLHFLGVFRIGLLFREV 121
Query: 225 NFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYT 284
F A + + AY+ GL FA +PC PVLAT+L G LL +Y+
Sbjct: 122 RFQNLRKGAGY---LGAYVIGLAFAFGWTPCVGPVLATILMVAGIEGSAAHGAMLLGAYS 178
Query: 285 TGYVAPLLLAASFAGALQSLLS-FRKFSSWINPMSG-ALLLGGGLY 328
G P LLA+ F+G +L++ R + + G AL+L G L+
Sbjct: 179 LGIGLPFLLASLFSGQFIALMARMRAHMGLVEKLMGSALVLTGVLF 224
>gi|385763891|gb|AFI78715.1| sulfur/thiosulfate oxidation protein SoxV [uncultured bacterium
ws406H10]
Length = 213
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 89/204 (43%), Gaps = 20/204 (9%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGA----------FGSGKSRAQIIGDSIAFSLGLATTLA 176
AGL++ +SPC L ++P + Y+ G +R +II S+ F LG T
Sbjct: 12 AGLLSFVSPCVLPIVPPYIAYLAGISFSELGDDDLAPGTAR-RIILSSLFFVLGFTTVFV 70
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
LG AS G+ Q L + A + IVMGL+ + + + L D + +
Sbjct: 71 SLGATASVIGQTVAQYFDTLAIVAGVIIIVMGLHFVGLFRIGLLYREARIDVQNDKVGYA 130
Query: 237 SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
AY+ GL FA +PC PVLA +L L G LL Y+ G P +LAA
Sbjct: 131 G---AYVMGLAFAFGWTPCVGPVLAAILFVAGAEGTALRGAMLLAVYSLGIGIPFMLAAV 187
Query: 297 FAGALQSL------LSFRKFSSWI 314
FAG L + R S W+
Sbjct: 188 FAGRFLGLPTGSSGICARSKSPWV 211
>gi|319404151|emb|CBI77744.1| cytochrome c-type biogenesis protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 262
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 100/225 (44%), Gaps = 16/225 (7%)
Query: 115 ALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGY-----IGAFGSGKS------RAQIIGD 163
+ F++L+V F AG ++ LSPC L ++P L Y I F S K R ++
Sbjct: 2 VIEFSTLSVFF-AGALSFLSPCVLPLVPPYLCYMAGVSIDDFRSEKQDRRASVRLVLLSS 60
Query: 164 SIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFF 223
IAF G T LLG AS GK G + + + I+ GLN L + ++ L
Sbjct: 61 VIAFVFGFTTVFVLLGASASTLGKFIGYYRDWFAIVSGIIIIIFGLNFLGLFKIGLLLRE 120
Query: 224 DNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSY 283
F R A + AY+ GL FA +PC P+L ++ T + G LL Y
Sbjct: 121 ARFQTRKTPAG---PLGAYIIGLAFAFGWTPCIGPILGPIITLAGTKETVSEGAMLLGVY 177
Query: 284 TTGYVAPLLLAASFAGALQSLL-SFRKFSSWINPMSGALLLGGGL 327
G P LLAA F+ + L +FR + + G L+ G+
Sbjct: 178 ALGLGVPFLLAALFSSSFMGFLGAFRVHLGKVEKIIGIFLIITGI 222
>gi|389580132|ref|ZP_10170159.1| cytochrome c biogenesis protein [Desulfobacter postgatei 2ac9]
gi|389401767|gb|EIM63989.1| cytochrome c biogenesis protein [Desulfobacter postgatei 2ac9]
Length = 232
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 15/193 (7%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAF-------GSGKSRAQIIGDSIAFSLGLATTLAL 177
F AGL++ LSPC L ++P +I + + R ++I ++A+ G + L
Sbjct: 12 FAAGLLSFLSPCVLPLIPAYFSFITGLSLDELTADNKEVRKKVILSTLAYVAGFSFIFIL 71
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
G ASF G + + G+ ++ GL+LL II ++ F F + +
Sbjct: 72 FGASASFLGGLASRYSWAVRYVGGGIILIFGLHLLGIINIKSFQFERKFHFKETPFHLFG 131
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLL-SYTTGYVAPLLLAAS 296
+ +L G+ F SPC P+L ++L VA S+D ++ G LLL +Y+ G P ++ +
Sbjct: 132 T---FLIGMAFGAGWSPCIGPMLGSIL-IVAGSQDTILQGVLLLATYSAGMALPFIVISI 187
Query: 297 FAGALQSLLSFRK 309
F + S+L+F K
Sbjct: 188 F---INSMLNFMK 197
>gi|168180393|ref|ZP_02615057.1| putative cytochrome c-type biogenesis protein [Clostridium
botulinum NCTC 2916]
gi|182668848|gb|EDT80826.1| putative cytochrome c-type biogenesis protein [Clostridium
botulinum NCTC 2916]
Length = 228
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 95/189 (50%), Gaps = 16/189 (8%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
+L + F G+++S SPC LS LPL +GY+ +G + S+ FSLG+ T LG
Sbjct: 19 ALLISFLGGIISSFSPCILSSLPLIIGYVNKYGRDDKKTAF-KYSLFFSLGIIITFTSLG 77
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
+ +S GK + G L I +GL L+ +IE + A P
Sbjct: 78 IISSLVGKFFTSGGKLWYLLLGVAMIFVGLQLIGVIE-----------SKNKACKVPKKR 126
Query: 240 Q----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
+ A+ G+ + +SPCSTP+L +L +V + + L+G +LL Y+ G+ ++L+
Sbjct: 127 KGLLGAFFLGILGGVLSSPCSTPILIAILAFVGSKGNILLGFLMLLLYSIGHCFVIILSG 186
Query: 296 SFAGALQSL 304
+ G ++SL
Sbjct: 187 TSLGFVESL 195
>gi|421835805|ref|ZP_16270459.1| putative c-type cytochrome biogenesis protein [Clostridium
botulinum CFSAN001627]
gi|409742454|gb|EKN41852.1| putative c-type cytochrome biogenesis protein [Clostridium
botulinum CFSAN001627]
Length = 228
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 95/189 (50%), Gaps = 16/189 (8%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
+L + F G+++S SPC LS LPL +GY+ +G + S+ FSLG+ T LG
Sbjct: 19 ALLISFLGGIISSFSPCILSSLPLIIGYVNKYGRDDKKTAF-KYSLFFSLGIIITFTSLG 77
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
+ +S GK + G L I +GL L+ +IE + A P
Sbjct: 78 IISSLVGKFFTSGGKLWYLLLGVAMIFVGLQLIGVIE-----------SKNKACKVPKKR 126
Query: 240 Q----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
+ A+ G+ + +SPCSTP+L +L +V + + L+G +LL Y+ G+ ++L+
Sbjct: 127 KGLLGAFFLGILGGVLSSPCSTPILIAILAFVGSKGNILLGFLMLLLYSIGHCFVIILSG 186
Query: 296 SFAGALQSL 304
+ G ++SL
Sbjct: 187 TSLGFVESL 195
>gi|383807746|ref|ZP_09963305.1| hypothetical protein IMCC13023_12670 [Candidatus Aquiluna sp.
IMCC13023]
gi|383298489|gb|EIC91105.1| hypothetical protein IMCC13023_12670 [Candidatus Aquiluna sp.
IMCC13023]
Length = 240
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 21/204 (10%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAG 186
AG+VT LSPC L ++P LGY+ GS ++ +++ +I F LG + LGV A AG
Sbjct: 22 AGIVTFLSPCVLPLVPGYLGYVS--GSANTKTRVMTGAILFVLGFSAVFVSLGVLAGTAG 79
Query: 187 ------KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
+ Q+ GL + G A++ L L+ +F P+ A P
Sbjct: 80 LLVLVRNPWIQVVLGLMVVIFGFAMIGQLGFLQ------RNFKLKLSPKMGLAGAP---- 129
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAP-LLLAASFAG 299
G+ FAL +PC P L+ +L + + DPL GG L Y+ G P +L+AA F
Sbjct: 130 --FLGVVFALGWTPCIGPTLSAVLVLASDTADPLRGGILATVYSLGIGIPFILIAAGFDW 187
Query: 300 ALQSLLSFRKFSSWINPMSGALLL 323
A S+ ++ N + GA+L+
Sbjct: 188 AKTSVGFIKRHIRTFNLVGGAMLI 211
>gi|268324117|emb|CBH37705.1| putative cytochrome c-type biogenesis protein [uncultured archaeon]
gi|268326434|emb|CBH40022.1| putative cytochrome c-type biogenesis protein [uncultured archaeon]
Length = 216
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASF 184
F G+++ LSPC L V+PL Y + SGK I +GL+T+ L+GV AS
Sbjct: 11 FAFGILSVLSPCILPVIPLIAAY--STKSGKYMP------ITIVIGLSTSFTLMGVLASA 62
Query: 185 AGKAYGQIGTGLPLAASGLAIVMGLNLL-EIIELQLPSFFDN--FDPRAAAANFPSSVQA 241
G + Q T L + I +GL ++ ++IE + N + N S+
Sbjct: 63 FGSVFQQYSTMLYTIGGVVIIFLGLCMIFDVIEQNIRRIIPNTGLSTNFSMTNVGSTAGG 122
Query: 242 YLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGAL 301
+ G + + PC P+L T+L VA D L G LL Y+ G P LLA ++
Sbjct: 123 LIFGFSLGIVWIPCVGPILGTILAIVAVEGDILYGAILLAIYSLGLGIP-LLAIAYTSRF 181
Query: 302 QSLLSFRKFSSWINPMSGALLLGGGLYTFL 331
SL K+S I +SG +L+ GLY L
Sbjct: 182 -SLKRLNKYSVSIKRISGVILVLMGLYMLL 210
>gi|421061224|ref|ZP_15523582.1| cytochrome c biogenesis protein transmembrane region, partial
[Pelosinus fermentans B3]
gi|421065695|ref|ZP_15527407.1| cytochrome c biogenesis protein transmembrane region, partial
[Pelosinus fermentans A12]
gi|392450801|gb|EIW27814.1| cytochrome c biogenesis protein transmembrane region, partial
[Pelosinus fermentans B3]
gi|392458315|gb|EIW34865.1| cytochrome c biogenesis protein transmembrane region, partial
[Pelosinus fermentans A12]
Length = 204
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 91/186 (48%), Gaps = 10/186 (5%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSL-------GL 171
+L F AG ++ LSPC L +LP + ++ SGK + + ++ F L GL
Sbjct: 6 VTLVTAFIAGTISFLSPCVLPLLPTYMAFLTGAESGKLQDDNLVNTWPFLLRISCFLSGL 65
Query: 172 ATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAA 231
+ ++G AS+ G+ + + + ++MG++LL I++L+ + P
Sbjct: 66 SLVFIMMGATASYFGQLFLDYQDAIRQIGAIFMVIMGIHLLGIVKLEWLE--REYRP-LL 122
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
F + A++ G+ F +PC+ P+LA++L Y +T+ G LL Y+ G+ P
Sbjct: 123 QHTFQGPIGAFILGVAFTAGWTPCTGPILASILVYASTTITLSQGAFLLFVYSLGFSVPF 182
Query: 292 LLAASF 297
LL A F
Sbjct: 183 LLMALF 188
>gi|407800087|ref|ZP_11146955.1| cytochrome c-type biogenesis protein CcdA [Oceaniovalibus
guishaninsula JLT2003]
gi|407058079|gb|EKE44047.1| cytochrome c-type biogenesis protein CcdA [Oceaniovalibus
guishaninsula JLT2003]
Length = 249
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 96/204 (47%), Gaps = 11/204 (5%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGK-----SRAQIIGDSIAFSLGLATTLALLGVG 181
AGL++ LSPC L ++P L Y+G + R + + ++ F LGL+T LLG
Sbjct: 21 AGLLSFLSPCVLPIVPPYLAYMGGMTMTEMTGAAQRGRAVLPALFFVLGLSTVFLLLGFT 80
Query: 182 ASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP-SSVQ 240
AS G + Q T + + IV GL+ L + + F D D R A + S++
Sbjct: 81 ASAFGAFFLQNQTLFSRLSGLVVIVFGLHFLGVFRI---GFLDR-DMRLDAGDQGGSALG 136
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGA 300
AY+ GL FA +PC P L +L A+ D G TLL Y G P LLAA F
Sbjct: 137 AYVLGLAFAFGWTPCIGPQLGAILSLAASEADVTRGTTLLAVYAAGLGIPFLLAALFIQR 196
Query: 301 LQSLLS-FRKFSSWINPMSGALLL 323
L++ R + I G LLL
Sbjct: 197 AVGLMNRLRPYMRLIERGMGVLLL 220
>gi|405354097|ref|ZP_11023506.1| Cytochrome c-type biogenesis protein DsbD, protein-disulfide
reductase [Chondromyces apiculatus DSM 436]
gi|397092788|gb|EJJ23537.1| Cytochrome c-type biogenesis protein DsbD, protein-disulfide
reductase [Myxococcus sp. (contaminant ex DSM 436)]
Length = 480
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 14/219 (6%)
Query: 122 AVIFGAGLVTSLSPCTLSVLPLTLGYIGAF-GSGKSRAQIIGDSIAFSLGLATTLALLGV 180
AV+F GL+T+++PC ++P+T+ GA G+ RA ++ S + +G+ + LGV
Sbjct: 48 AVVFAGGLLTAMTPCVYPLIPITVSVFGARKAEGRGRALLLTSS--YIVGMGVVFSALGV 105
Query: 181 GASFAGKAYGQIGTGLPLAASGLAI---VMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
A+ G+A+G + G P +GLA+ ++ ++ EL LPS A
Sbjct: 106 LAAKTGQAFGSM-LGHPAVVTGLAVFLLLLATSMFGAFELALPSSLQTKLNDVGGAGV-- 162
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
A+L G A+PC+ PVL LL +VA + + +G +LL Y G P L F
Sbjct: 163 -AGAFLMGSVSGFLAAPCTGPVLTGLLAFVAKTANTTLGASLLFVYALGIGVPFFLIGVF 221
Query: 298 AGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFP 336
L + W+ + G +L+ +++L FP
Sbjct: 222 T---VRLPRGGVWMEWVKSVLGIMLVALA-FSYLKDAFP 256
>gi|404476125|ref|YP_006707556.1| thiol disulfide interchange protein [Brachyspira pilosicoli B2904]
gi|404437614|gb|AFR70808.1| thiol disulfide interchange protein [Brachyspira pilosicoli B2904]
Length = 571
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 17/199 (8%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAF-GSGKSRAQIIGDSIAFSLGLATTLA 176
F +L +IF AGL + L PCT +L +T+ +G S K++ + S+ F+LG+ TT
Sbjct: 168 FITLILIFAAGLASVLLPCTYPLLSITVSILGTTTDSKKNKKSSVLASLLFALGVITTYT 227
Query: 177 LLGVGASFAGKAY------GQIGTGLPLAASGLAIVM---GLNLLEIIELQLPSFFDNFD 227
LLG S AG A+ G IG P+ + L ++ ++ E++ PSF +
Sbjct: 228 LLGAVVSVAGFAFHKTILFGSIGYN-PIVLTILVLLFLYFTFSMAGFYEIKAPSFLQSAK 286
Query: 228 PRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLL--GYVATSKDPLIGGTLLLSYTT 285
A A S Y+ GL + A+PC+ P++A +L G++ +P+ + Y
Sbjct: 287 TNAYAKKNQSIFHKYIMGLLAGIVATPCAAPIIAVILEIGFL----NPVFATLYMAVYAL 342
Query: 286 GYVAPLLLAASFAGALQSL 304
G+ + L + +FA L +
Sbjct: 343 GFASVLFILGTFASILTKM 361
>gi|209884614|ref|YP_002288471.1| C-type cytochrome biogenesis protein [Oligotropha carboxidovorans
OM5]
gi|337741722|ref|YP_004633450.1| cytochrome c-type biogenesis protein CcdA [Oligotropha
carboxidovorans OM5]
gi|386030738|ref|YP_005951513.1| cytochrome c-type biogenesis protein CcdA [Oligotropha
carboxidovorans OM4]
gi|209872810|gb|ACI92606.1| C-type cytochrome biogenesis protein [Oligotropha carboxidovorans
OM5]
gi|336095806|gb|AEI03632.1| cytochrome c-type biogenesis protein CcdA [Oligotropha
carboxidovorans OM4]
gi|336099386|gb|AEI07209.1| cytochrome c-type biogenesis protein CcdA [Oligotropha
carboxidovorans OM5]
Length = 244
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 127 AGLVTSLSPCTLSVLPLTLGY-----IGAFGSGK----SRAQIIGDSIAFSLGLATTLAL 177
AGLV+ LSPC L ++P L Y + SG+ SR ++ ++ F LG +T
Sbjct: 13 AGLVSFLSPCVLPLVPAYLVYLTGATVEQVASGEKPAASRRAVLLSALLFVLGFSTVFVG 72
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
LG AS G A + L + A + IVMGL+ L + + F + R +
Sbjct: 73 LGASASVIGGALRRWSAELSIVAGIVIIVMGLHFLGLTRIG----FLMREGRLTVSKPMG 128
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPLLLAAS 296
AY+ GL FA +PC PVLA +L VA S+D + G LLL+ Y+ G P LLAA
Sbjct: 129 LWGAYVMGLAFAFGWTPCIGPVLAAILS-VAASEDTVQKGALLLAVYSAGLGIPFLLAAV 187
Query: 297 FAGALQSLLS-FRKFSSWINPMSGALLL 323
S+L+ R++ + + G L++
Sbjct: 188 LIERSSSMLARLRRYLPTVERVMGVLMI 215
>gi|322418223|ref|YP_004197446.1| cytochrome c biogenesis protein transmembrane region [Geobacter sp.
M18]
gi|320124610|gb|ADW12170.1| cytochrome c biogenesis protein transmembrane region [Geobacter sp.
M18]
Length = 238
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 22/223 (9%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFG---------SGKSRAQIIGDSIAFSLGLATTL 175
F AGL++ LSPC L ++P + YI S K R Q I S+ F G
Sbjct: 12 FVAGLLSFLSPCVLPLIPSYITYITGLSFADLNAEHPSHKVRQQTIIHSLLFIAGFTCVF 71
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LLG A+F G + T + L ++ G+++ + ++ + A +
Sbjct: 72 VLLGASATFVGDFLHEHKTAIRRIGGILIVIFGIHVSGLFDITMLLGEKKLTLHRKPAGY 131
Query: 236 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
S ++ G+ FA +PC P+LAT+L AT G LLLSY+ G P +A+
Sbjct: 132 LGS---FVVGIVFAAGWTPCIGPILATILAVAATEGR---GVWLLLSYSMGLAIPFFIAS 185
Query: 296 SFAGALQS-LLSFRKFSSWI---NPMSGALLLGGGLYTFLDRL 334
AL L+ FR+F I ++GAL++ G+ F + +
Sbjct: 186 L---ALHHFLIFFRRFKRHIRLFEIVTGALMVVVGILIFTNSM 225
>gi|254303826|ref|ZP_04971184.1| cytochrome c biogenesis protein CcdA [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
gi|422339310|ref|ZP_16420269.1| cytochrome c-type biogenesis protein CcdA [Fusobacterium nucleatum
subsp. polymorphum F0401]
gi|148324018|gb|EDK89268.1| cytochrome c biogenesis protein CcdA [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
gi|355371164|gb|EHG18522.1| cytochrome c-type biogenesis protein CcdA [Fusobacterium nucleatum
subsp. polymorphum F0401]
Length = 218
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 96/187 (51%), Gaps = 18/187 (9%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAG 186
AG+ + SPC ++P+ YI +G+ ++ + ++AF LGL+ T +LG GA F G
Sbjct: 14 AGVASFFSPCIFPIIPV---YISILSNGEKKS--VSKTLAFVLGLSVTYIVLGFGAGFIG 68
Query: 187 KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQA----Y 242
+ + + + + + L +++GL +E+++L+ F + N+ Q+ +
Sbjct: 69 ELF--LNSKVRVIGGILVVILGLFQMEVLKLK-------FLEKTKVMNYEGEEQSLFSTF 119
Query: 243 LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQ 302
L GLTF+L +PC P+LA++L +S D L++ Y G P ++ + + L
Sbjct: 120 LLGLTFSLGWTPCVGPILASILILAGSSGDTGNSVMLMVLYLLGMATPFVIFSLASKTLF 179
Query: 303 SLLSFRK 309
+SF K
Sbjct: 180 KKMSFIK 186
>gi|404368755|ref|ZP_10974104.1| hypothetical protein FUAG_00400 [Fusobacterium ulcerans ATCC 49185]
gi|313688050|gb|EFS24885.1| hypothetical protein FUAG_00400 [Fusobacterium ulcerans ATCC 49185]
Length = 414
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 20/223 (8%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGS--------GKSRAQIIGDSIAFSLGL 171
+ ++F G+ + SPC + +LP+ + Y+ + ++ ++ +I F LG+
Sbjct: 12 NFILVFLGGIFSFFSPCIIPLLPVYMSYLSGNTAVTDENGNLSYNQKKVFIHTIFFILGI 71
Query: 172 ATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAA 231
+ +LG+ S G + + L + +GL Q+ +NF R
Sbjct: 72 SAAFFILGLSFSKLGGFFNSNRVLFTRISGVLILFLGL-------FQIGLLKNNFMEREH 124
Query: 232 AANFPSS----VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGY 287
F S + A++ G TF+ A +PC PVL+T+L + +K +G L+L YT G+
Sbjct: 125 RIGFDSKEINPLIAFIIGFTFSFAWTPCIGPVLSTVLIMASGAKTAFMGNMLILVYTLGF 184
Query: 288 VAPLLLAASFAGALQSLLSFRK-FSSWINPMSGALLLGGGLYT 329
V P LL F + + L +K F + +SGA+L+ G+ T
Sbjct: 185 VIPFLLLGVFTTKILNFLKAKKSFLKYSIKISGAILIIIGIMT 227
>gi|300114557|ref|YP_003761132.1| cytochrome c biogenesis protein transmembrane region [Nitrosococcus
watsonii C-113]
gi|299540494|gb|ADJ28811.1| cytochrome c biogenesis protein transmembrane region [Nitrosococcus
watsonii C-113]
Length = 627
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 18/233 (7%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLAL 177
+ +LA FG GL+ S +PC ++P+ G I G + + S+A+ L +A T +
Sbjct: 198 WLTLAAFFGFGLLLSFTPCVFPMIPILSGIIVGQGKNITTWRSFMLSLAYVLAMALTYTV 257
Query: 178 LGVGASFAGKAYGQI--GTGLPLAASGLAIVMGLNLLEIIELQLPSFFD----NFDPRAA 231
G+ AS G+ G+ + AS + +++ L++ ++ +QLP+ + +
Sbjct: 258 AGIVASLLGENLQATFQHPGILIGASLVFVLLALSMFDLYHIQLPTRLQTRLLHLSQKQK 317
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
+ A L GL AL PC P LA L Y+ S D L+GG+ L + + G PL
Sbjct: 318 GGTL---LGAGLMGLFSALIVGPCVAPPLAGALIYIGESGDALLGGSALFALSMGMGTPL 374
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLYTFLDRLFPTTMAM 341
L + AG L SW+ P+ G LLL ++ L R+ P + M
Sbjct: 375 LFLGASAGKL-----LPHAGSWMQPIKYLFGVLLLAVAIW-LLSRILPQAIIM 421
>gi|406898320|gb|EKD41964.1| thiol:disulfide interchange protein [uncultured bacterium]
Length = 542
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 6/169 (3%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
SL + F G+++ +PC ++P+T+ IG KSR + ++ +G+A +LLG
Sbjct: 202 SLLIAFLGGVLSDFTPCVWPMIPVTMVIIGV-RKDKSRLHNLLAALVLVMGMAVMYSLLG 260
Query: 180 VGASFAGKAYGQI--GTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
+ ++ GK+ G + T + ++MGL+L + E +LP F + A +
Sbjct: 261 MASAILGKSLGFLFQQTFFLWLLFAVMLLMGLSLFGLFEFRLPPRFLTWLANLTATGYRG 320
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTG 286
+L G T + A+PC PV+ ++L YVA ++D G L+L Y G
Sbjct: 321 ---IFLVGFTLGVLAAPCVGPVIGSILIYVAQTQDVWFGFWLMLFYALG 366
>gi|159184921|ref|NP_354781.2| cytochrome c-type biogenesis protein [Agrobacterium fabrum str.
C58]
gi|159140200|gb|AAK87566.2| cytochrome c-type biogenesis protein [Agrobacterium fabrum str.
C58]
Length = 214
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 84/158 (53%), Gaps = 8/158 (5%)
Query: 155 KSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEI 214
+ R ++ + F+LG AT LG GAS G Q L + I+MGLN L +
Sbjct: 19 EVRRAVLFSAFCFTLGFATVFVALGAGASTIGTLLRQNLDILAKIGGFIIILMGLNFLGV 78
Query: 215 IELQLPSFFDNFDPRAAAANFPSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDP 273
+ L S + R A P+++ AY+ GL FA +PC PVL +LG VA S+D
Sbjct: 79 FRIGLFSR----EARFQGAGKPATLSGAYVMGLAFAFGWTPCIGPVLGAILG-VAASRDT 133
Query: 274 LIGGTLLLS-YTTGYVAPLLLAASFAGA-LQSLLSFRK 309
+ G +LL+ Y+ G P +AA+F+G+ ++ L+ FR+
Sbjct: 134 VGDGAMLLAVYSLGLAVPFWIAAAFSGSFMRFLVRFRR 171
>gi|410458703|ref|ZP_11312460.1| cytochrome c biogenesis protein transmembrane protein [Bacillus
azotoformans LMG 9581]
gi|409931053|gb|EKN68041.1| cytochrome c biogenesis protein transmembrane protein [Bacillus
azotoformans LMG 9581]
Length = 235
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 106/218 (48%), Gaps = 17/218 (7%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ-------IIGDSIAFSLGLATTLAL 177
FGAG ++ +SPC L + P L YI + + + + +I F +G ++ +
Sbjct: 10 FGAGFLSFISPCCLPLYPAFLSYITGVSVTELKEENAMMQRRTMLHTIFFLIGFSSIFIM 69
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
LG+ SF GK + Q + + L + G ++ +++ P F D + A N P+
Sbjct: 70 LGMSTSFIGKFFMQYNDLIRQIGAILIVFFGFVIVGVLK---PDFLMK-DRKIAFKNRPT 125
Query: 238 S-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
+ + L G+ FA +PC+ P+LA ++ + +P G +++YT G+ P + +
Sbjct: 126 GFIGSILIGMGFAAGWTPCTGPILAAVIA--LSVSNPGSGMLYMIAYTLGFAIPFFILSF 183
Query: 297 FAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
F G +Q + ++ S I + G +++ G++ F D +
Sbjct: 184 FIGRMQWI---KRNSVKIIQIGGYVMIVMGIFLFFDWM 218
>gi|121534782|ref|ZP_01666602.1| cytochrome c biogenesis protein, transmembrane region [Thermosinus
carboxydivorans Nor1]
gi|121306577|gb|EAX47499.1| cytochrome c biogenesis protein, transmembrane region [Thermosinus
carboxydivorans Nor1]
Length = 233
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 13/217 (5%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSR---AQIIGDSIAFSLGLATTLALLGVG 181
F AG+V+ LSPC L +LP + G+ R + + ++ F G +G
Sbjct: 12 FAAGVVSFLSPCVLPLLPTYTAVLAGTGTQTGRISQWRFLMNAACFFSGFIIIFVAMGAT 71
Query: 182 ASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQA 241
AS+ G+ + + + + I+MG++L I +LP+ + + P + A F + A
Sbjct: 72 ASYFGQVFFKYQDIIRKVGAVFMILMGIHLAGFI--RLPALYREYRPLLSGA-FEGPLGA 128
Query: 242 YLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAP-LLLAASFAGA 300
++ G+ F +PC+ P+LA++L Y S G LL Y G+ P ++LA F
Sbjct: 129 FILGIAFTAGWTPCTGPILASILIYAGASATVAQGAFLLFIYAIGFCLPFIVLALLFNRY 188
Query: 301 LQSLLSFRKFSSW---INPMSGALLLGGGLYTFLDRL 334
L + R+ W I +G +L+ G + + D L
Sbjct: 189 LHKV---RRLYQWLPAIQRAAGVILIIVGCFIYFDWL 222
>gi|153003508|ref|YP_001377833.1| cytochrome c biogenesis protein transmembrane region
[Anaeromyxobacter sp. Fw109-5]
gi|152027081|gb|ABS24849.1| cytochrome c biogenesis protein transmembrane region
[Anaeromyxobacter sp. Fw109-5]
Length = 466
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 113/242 (46%), Gaps = 20/242 (8%)
Query: 102 GQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQII 161
G Q++ + L+ S + AV F G+ TSL+PC ++P+T+ GA +G SR +
Sbjct: 30 GAQSDLQLGSLLAEGSIVAFAVAFAGGVATSLTPCVYPLIPITVSIFGARKAG-SRREAT 88
Query: 162 GDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLA---ASGLAIVMGLNLLEIIELQ 218
S + LG+A + LGVGA+ GKA+G + P + + + M ++ ELQ
Sbjct: 89 AVSALYVLGIAAMYSALGVGAALTGKAFGSVMQN-PWVIGFVAVVLVAMAASMFGAFELQ 147
Query: 219 LPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGT 278
LPS ++ R + A+ GL + A+PC+ PVLA L +VA G
Sbjct: 148 LPS---SWQARLSGVGGAGRTGAFAMGLVSGIIAAPCTGPVLAAALTFVAAKGSVAFGLG 204
Query: 279 LLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSG----ALLLGGGLYTFLDRL 334
++ +Y G L +F+ +S K +W+ + ALL G+ FL
Sbjct: 205 IMFTYALGMGLLFFLIGAFS------ISLPKSGAWMETVKSVFGVALLAAAGV--FLKDA 256
Query: 335 FP 336
FP
Sbjct: 257 FP 258
>gi|435854651|ref|YP_007315970.1| cytochrome c biogenesis protein [Halobacteroides halobius DSM 5150]
gi|433671062|gb|AGB41877.1| cytochrome c biogenesis protein [Halobacteroides halobius DSM 5150]
Length = 226
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 22/225 (9%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
S+ V F AG+ + +SPC L ++P +GYI K R + ++ F +G + +G
Sbjct: 5 SVVVAFMAGVASFVSPCVLPLVPAYIGYITGSAIDKGRLFTVVRALGFVIGFSIIFITMG 64
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFD---PRAAAANFP 236
AS+ G+ + Q + L I+ GL++ + +L+L + F PR A N+
Sbjct: 65 ASASYIGRLFSQYKLLFTKVSGILIIIFGLHMTGLFKLKL--LYQEFRVQGPR-QATNWF 121
Query: 237 SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
SS+ L G+ FA PC VL ++L Y G LL +Y+ G P +L A
Sbjct: 122 SSI---LMGMAFAAGWIPCVGTVLGSILLYAGAEATLKTGVLLLTAYSLGLGLPFILTAI 178
Query: 297 FAGALQSLLSFRKFSSWIN-------PMSGALLLGGGLYTFLDRL 334
F F FS+ IN SG +++ G+ +L+++
Sbjct: 179 FIN------QFSNFSNHINNYLPIISKFSGVIMIVFGVLLYLNKV 217
>gi|222085952|ref|YP_002544484.1| cytochrome-c-type biogenesis protein [Agrobacterium radiobacter
K84]
gi|221723400|gb|ACM26556.1| cytochrome-c-type biogenesis protein [Agrobacterium radiobacter
K84]
Length = 250
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 91/209 (43%), Gaps = 17/209 (8%)
Query: 133 LSPCTLSVLPLTLGYIGAFGSGK-------------SRAQIIGDSIAFSLGLATTLALLG 179
LSPC L ++P L Y+ + R ++ ++ F+LG AT LG
Sbjct: 20 LSPCVLPLVPPYLCYMAGISVEQFRGGGAAVASGASVRGNVLFSALFFTLGFATVFIALG 79
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
GAS G Q L + ++MGLN L + L + + F A
Sbjct: 80 AGASSIGLLLRQHLDILSKIGGLIIVIMGLNFLGVFRLGILAREARFQGNGKPATLTG-- 137
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
AY+ GL FA +PC PVL +LG A+ + G LL Y+ G P +AA F+G
Sbjct: 138 -AYIMGLAFAFGWTPCIGPVLGAILGVAASRETIGAGAGLLAIYSLGLAIPFWIAAGFSG 196
Query: 300 ALQS-LLSFRKFSSWINPMSGALLLGGGL 327
A S L+ FR+ + + G L+ GL
Sbjct: 197 AFMSFLVRFRRHLGTVEKVMGGFLVLTGL 225
>gi|373496402|ref|ZP_09586948.1| hypothetical protein HMPREF0402_00821 [Fusobacterium sp. 12_1B]
gi|371965291|gb|EHO82791.1| hypothetical protein HMPREF0402_00821 [Fusobacterium sp. 12_1B]
Length = 414
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 20/223 (8%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGS--------GKSRAQIIGDSIAFSLGL 171
+ ++F G+ + SPC + +LP+ + Y+ + ++ ++ +I F LG+
Sbjct: 12 NFILVFLGGIFSFFSPCIIPLLPVYMSYLSGNTAVTDENGNLSYNQKKVFIHTIFFILGI 71
Query: 172 ATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAA 231
+ +LG+ S G + + L + +GL Q+ +NF R
Sbjct: 72 SAAFFILGLSFSKLGGFFNSNRVLFTRISGVLILFLGL-------FQIGLLKNNFMEREH 124
Query: 232 AANFPSS----VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGY 287
F S + A++ G TF+ A +PC PVL+T+L + +K +G L+L YT G+
Sbjct: 125 RIGFDSKEINPLIAFIIGFTFSFAWTPCIGPVLSTVLIMASGAKTAFMGNMLILVYTLGF 184
Query: 288 VAPLLLAASFAGALQSLLSFRK-FSSWINPMSGALLLGGGLYT 329
V P LL F + + L +K F + +SGA+L+ G+ T
Sbjct: 185 VIPFLLLGVFTTKILNFLKAKKSFLKYSIKISGAILIIIGIMT 227
>gi|239826742|ref|YP_002949366.1| cytochrome c biogenesis protein transmembrane protein [Geobacillus
sp. WCH70]
gi|239807035|gb|ACS24100.1| cytochrome c biogenesis protein transmembrane region [Geobacillus
sp. WCH70]
Length = 235
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 106/224 (47%), Gaps = 17/224 (7%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ-------IIGDSIAFSLGL 171
+L + FGAG ++ +SPC L + P L YI + + + + ++ F LG
Sbjct: 4 VNLFLAFGAGFLSFISPCCLPLYPAFLSYITGISVSELKTENALMQRRSLLHTLFFLLGF 63
Query: 172 ATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAA 231
+ +G G S GK + + + + L I+ GL ++ I P+F D R +
Sbjct: 64 SLIFISIGFGTSLIGKWFSEYQDFIRQIGALLIIIFGLVIVGIWN---PAFLMK-DRRFS 119
Query: 232 AANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAP 290
PS + + + G+ FA +PC+ P+L +++ AT +P G +L+Y+ G+ P
Sbjct: 120 FQERPSGYIGSIIIGMAFAAGWTPCTGPILVSVIALAAT--NPSSGMLYMLAYSLGFAVP 177
Query: 291 LLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
+ + F G LQ + R+ S + + G +++ G+ F D +
Sbjct: 178 FFILSFFIGKLQWI---RRHSEKMMKIGGYVMIAMGVVLFFDWM 218
>gi|126179224|ref|YP_001047189.1| cytochrome c biogenesis protein, transmembrane region
[Methanoculleus marisnigri JR1]
gi|125862018|gb|ABN57207.1| cytochrome c biogenesis protein, transmembrane region
[Methanoculleus marisnigri JR1]
Length = 300
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 16/209 (7%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASF 184
F GL + SPC +++L L Y+ GSGK + +S+ F LGL +LG
Sbjct: 98 FSLGLFSGFSPCLMAILGFILVYVT--GSGKGLRSSLLNSVIFGLGLVAAYIVLGCCFLL 155
Query: 185 AGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLA 244
AG + G G L +AA + I+ G+NLL +I +LP D++ + + + ++
Sbjct: 156 AGMSLGGFGPYLAVAAGLITILTGVNLLGLI--KLPISADDYVKSSIRKHATTLAGLFIL 213
Query: 245 GLTFALAASPCSTPVLATLLGYVATSKDPLIGGT-----LLLSYTTGYVAPLLLAASFAG 299
G+ F++ +PC+ P+L LL + LI GT LLL + G + P L G
Sbjct: 214 GMIFSIVKAPCAAPMLLVLLSRI------LIDGTVQDLSLLLVFGAGVLTP-FLGVGVLG 266
Query: 300 ALQSLLSFRKFSSWINPMSGALLLGGGLY 328
S R++ I SG LL+G G++
Sbjct: 267 GYASSSRIREYRDVIRAGSGILLIGFGVW 295
>gi|212639331|ref|YP_002315851.1| cytochrome c biogenesis protein [Anoxybacillus flavithermus WK1]
gi|212560811|gb|ACJ33866.1| Cytochrome c biogenesis protein [Anoxybacillus flavithermus WK1]
Length = 243
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 110/234 (47%), Gaps = 25/234 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-----------SIAFS 168
L V FGAG+++ +SPC L + P L YI +G S + + D ++ F
Sbjct: 13 QLFVAFGAGVLSFISPCCLPLYPAFLSYI----TGISVSDLKSDYALLQKRSLLHTLFFL 68
Query: 169 LGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
LG + +G G S G+ + + + L + G ++ I + P+F D
Sbjct: 69 LGFSFIFIAIGFGTSILGRFFHTYQDLIRQIGAILMVFFGFVIIGIFK---PTFLMT-DR 124
Query: 229 RAAAANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGY 287
R + PS + ++L G+ FA +PC+ P+L +++ AT +P +G + +Y+ G+
Sbjct: 125 RLSFQQRPSGYIGSFLIGMAFAAGWTPCTGPILVSVIALAAT--NPSLGVVYMTAYSLGF 182
Query: 288 VAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFPTTMAM 341
P LL + F G + + RK + + G +++G G+ F D + T+ M
Sbjct: 183 ALPFLLLSFFIGKMGWI---RKHHVKLMKVGGYVMIGMGVVLFFDWMTKITIYM 233
>gi|357638324|ref|ZP_09136197.1| cytochrome C biogenesis protein transmembrane region [Streptococcus
urinalis 2285-97]
gi|418416078|ref|ZP_12989277.1| hypothetical protein HMPREF9318_00025 [Streptococcus urinalis
FB127-CNA-2]
gi|357586778|gb|EHJ56186.1| cytochrome C biogenesis protein transmembrane region [Streptococcus
urinalis 2285-97]
gi|410873896|gb|EKS21827.1| hypothetical protein HMPREF9318_00025 [Streptococcus urinalis
FB127-CNA-2]
Length = 241
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 18/186 (9%)
Query: 122 AVIFGAGLVTSLSPCTLSVLPLTLGY---------IGAFGSGKSRAQIIGDSIAFSLGLA 172
+ +F AG+++ SPC VLP+ LG + FG + I+ + F L L+
Sbjct: 9 STVFIAGILSFFSPCIFPVLPVYLGLLLDQDESHQVKLFGKNFNWLGIL-KTFCFILRLS 67
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQ--LPSFFDNFDPRA 230
T +LG GA F G + + L IV+G++ +EII L+ L F ++
Sbjct: 68 TVFIILGYGAGFLGNIIN--ASWFRVIMGVLIIVLGIHQMEIITLKRLLRQKQITFKQKS 125
Query: 231 AAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLI-GGTLLLSYTTGYVA 289
+ ++F + A++ GLTF+ +PC PVL+++LG AT + GG +++Y G
Sbjct: 126 SRSDF---LNAFVLGLTFSFGWTPCVGPVLSSVLGLAATGGSGAVSGGLYMVNYAIGLSL 182
Query: 290 PLLLAA 295
P LL A
Sbjct: 183 PFLLIA 188
>gi|300869813|ref|YP_003784684.1| thiol disulfide interchange protein [Brachyspira pilosicoli
95/1000]
gi|300687512|gb|ADK30183.1| thiol disulfide interchange protein [Brachyspira pilosicoli
95/1000]
Length = 569
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAF-GSGKSRAQIIGDSIAFSLGLATTLA 176
F +L +IF AGL + L PCT +L +T+ +G G ++ + S+ F+LG+ TT
Sbjct: 166 FITLILIFAAGLASVLLPCTYPLLSITVSILGTTTGEKNNKKSSVLASLLFALGVITTYT 225
Query: 177 LLGVGASFAGKAY------GQIGTGLPLAASGLAIVM---GLNLLEIIELQLPSFFDNFD 227
LLG S AG A+ G IG P+ + L ++ ++ E++ PSF +
Sbjct: 226 LLGAVVSVAGFAFHKTILFGSIGYN-PIVLTILVLLFLYFTFSMAGFYEIKAPSFLQSAK 284
Query: 228 PRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLL--GYVATSKDPLIGGTLLLSYTT 285
A A S Y+ GL + A+PC+ P++A +L G++ +P+ + Y
Sbjct: 285 TNAYAKKNQSIFHKYIMGLLAGIVATPCAAPIIAVILEIGFL----NPVFATLYMAVYAL 340
Query: 286 GYVAPLLLAASFAGALQSL 304
G+ + L L +FA L +
Sbjct: 341 GFASVLFLLGTFASILTKM 359
>gi|452992477|emb|CCQ96109.1| Cytochrome c-type biogenesis protein CcdA [Clostridium ultunense
Esp]
Length = 235
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 28/229 (12%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS------------RAQIIGDSIAFSLGLA 172
F AG+++ LSPC L + P L YI SG S R Q++ ++ F GL+
Sbjct: 10 FSAGIISFLSPCVLPLYPSFLSYI----SGVSVADLKEGDKTGIRKQVLLHTLFFVTGLS 65
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIV-MGLNLLEIIELQLPSFFDNFDPRAA 231
++G GAS G + Q GL + I+ MGL L+ ++ F + R
Sbjct: 66 LIYVMMGFGASLIGDLF-QTYNGLIRQIGAIFIIMMGLVLIGWLKFD----FLMREHRLE 120
Query: 232 AANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAP 290
N P+ + ++ G +FA +PC P+L ++L AT D + TL Y+ G+ P
Sbjct: 121 IRNKPAGYLGSFFIGFSFAAGWTPCIGPILGSILALGATQPDLALYYTLF--YSIGFSIP 178
Query: 291 LLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFPTTM 339
+L A F G +++L K+S+ I + G L++ G+ F D++ T+
Sbjct: 179 FILLAFFIGTTRAIL---KYSNLIAKVGGGLMILMGILLFTDQMSKITI 224
>gi|281413031|ref|YP_003347110.1| cytochrome c biogenesis protein transmembrane region [Thermotoga
naphthophila RKU-10]
gi|281374134|gb|ADA67696.1| cytochrome c biogenesis protein transmembrane region [Thermotoga
naphthophila RKU-10]
Length = 216
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 21/194 (10%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFA 185
G G++ SPC L ++P LG + F S ++IG F +G+++ +++GV
Sbjct: 15 GYGVLAFFSPCVLPLIPAFLGVL--FASKGDFLKVIG----FFVGISSLFSVIGV----- 63
Query: 186 GKAYGQIGTGLP----LAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQA 241
+G G +P SGL +V+ L + +++L N P +
Sbjct: 64 --LFGLFGNFIPAYILTWVSGLVLVV-FGLFYLFDVELVKMKKN--PNVWRYKGEGFLNG 118
Query: 242 YLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGAL 301
+L G + L PCS+P+L ++L VA+ ++P+ GG LL Y+ G P +L F L
Sbjct: 119 FLLGGSVGLVWIPCSSPILGSILAIVASGREPVKGGVLLFLYSLGISIPFILMGGFVNKL 178
Query: 302 QSLLSFRKFSSWIN 315
+ +SF+K W+N
Sbjct: 179 LNRVSFKK-PVWMN 191
>gi|322379431|ref|ZP_08053801.1| cytochrome c biogenesis protein [Helicobacter suis HS1]
gi|322380958|ref|ZP_08055024.1| cytochrome c biogenesis protein [Helicobacter suis HS5]
gi|321146630|gb|EFX41464.1| cytochrome c biogenesis protein [Helicobacter suis HS5]
gi|321148140|gb|EFX42670.1| cytochrome c biogenesis protein [Helicobacter suis HS1]
Length = 243
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 14/233 (6%)
Query: 113 LSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGA-----FGSGK-SRAQIIGDSIA 166
LS L F AG++ LSPC L ++P + YI +G+ SR I+ +
Sbjct: 7 LSIFDHMPLVASFFAGILAFLSPCILPLIPAYMSYISQTSLEDLKNGQASRFSILIKASL 66
Query: 167 FSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNF 226
F LG L+GV + AY GT + + L I+ GL+ L I+ ++L +
Sbjct: 67 FVLGFGLIFWLIGVSMAKIMHAYLN-GTWTRVISGSLVILFGLHFLGILPIKLLYQSKTW 125
Query: 227 DPRAAAAN-FPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTT 285
D R N F S+ + G++FAL +PC P+ +++ + + + G LL +
Sbjct: 126 DMRLEFKNPFLQSLVPLVLGMSFALGWTPCIGPIFTSII--LLSGAQHVYGMALLGVFVL 183
Query: 286 GYVAPLLLAASFAG-ALQSLLSFRKFSSWINPMSGALLLGGGLYTF---LDRL 334
G+ P L+ A AL L R+++ WI +SG +LL G+ +DRL
Sbjct: 184 GFGVPFLIVALVINQALGFLKKIRQYAYWIEKISGLVLLLMGILIISGQMDRL 236
>gi|260891146|ref|ZP_05902409.1| cytochrome c-type biogenesis protein CcdA [Leptotrichia hofstadii
F0254]
gi|260859173|gb|EEX73673.1| cytochrome c-type biogenesis protein CcdA [Leptotrichia hofstadii
F0254]
Length = 212
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 104/216 (48%), Gaps = 21/216 (9%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGAS 183
+F G+ + LSPC L ++P+ Y+G GK ++ F LGL+ T +G S
Sbjct: 11 VFLGGVASFLSPCILPIVPV---YLGILSKGKKTVL---NTFLFILGLSLTFVSIGFSFS 64
Query: 184 FAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP-----SS 238
F + + + A + I++GL+ I++ NF + + N SS
Sbjct: 65 FLTGIF--FNDTIKVLAGIIVIILGLHQTGILKF-------NFLEKNKSVNLDLIGKNSS 115
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFA 298
+QA+L GLTF+L +PC P+LA++L + GG ++ Y G P +L + F+
Sbjct: 116 LQAFLLGLTFSLGWTPCVGPILASVLTLAGEKGSAVYGGLMMFIYVLGLATPFVLFSFFS 175
Query: 299 GA-LQSLLSFRKFSSWINPMSGALLLGGGLYTFLDR 333
L+ + + +++++ G L++ G+ +++
Sbjct: 176 QELLKKVRALNQYTNYFKIFGGFLIIFMGILLIMNK 211
>gi|224373303|ref|YP_002607675.1| C-type cytochrome biogenesis protein [Nautilia profundicola AmH]
gi|223589334|gb|ACM93070.1| C-type cytochrome biogenesis protein [Nautilia profundicola AmH]
Length = 230
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG---------SGKSRAQIIGDSIAFSLGLATTLAL 177
AGL++ LSPC L ++P+ YI +GK R +I +S F G A+ L
Sbjct: 23 AGLLSFLSPCVLPLVPIYFFYITGISAKELKEKELTGKERIKIFINSALFIAGFASVFIL 82
Query: 178 LGVG-ASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
+G A+ G + + LA + I+ G+N+ I+ F ++ R N
Sbjct: 83 IGAASANLIGNIFAYKWVNVVLAL--VIILFGINVAGFIKFN----FLQYEKRLNLQN-- 134
Query: 237 SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
A+L G +FA +PC P+ T++G AT +P ++++ YT G P +L A
Sbjct: 135 --AGAFLLGFSFAFGWTPCIGPIFGTIIGMAAT--EPAKALSMMVLYTLGLATPFILMAL 190
Query: 297 F-AGALQSLLSFRKFSSWINPMSGALLLGGGLY 328
F +++ + + + I +SG LL+ G+Y
Sbjct: 191 FTVWSMKLIDKMKNYMGIIEKISGFLLISVGVY 223
>gi|386712894|ref|YP_006179216.1| cytochrome c biogenesis protein CcdA [Halobacillus halophilus DSM
2266]
gi|384072449|emb|CCG43939.1| cytochrome c biogenesis protein CcdA [Halobacillus halophilus DSM
2266]
Length = 249
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 110/228 (48%), Gaps = 27/228 (11%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFG--------SGKSRAQIIGDSIAFSLGLATTLA 176
FGAG+++ LSPCTL + P L YI S K + +++ S+ F LG++T
Sbjct: 11 FGAGVISFLSPCTLPLFPAYLSYITGMSVKEIKEDQSAKVKRKLLLHSVFFLLGVSTVFL 70
Query: 177 LLGVGASFAGKAY-----GQIGTGLPLAASGLAIVMGLNLLEIIELQ--LPSFFDNFDPR 229
LG+GAS+ G G+ G L A I+MG + +++ + +F PR
Sbjct: 71 TLGIGASYLGNVIQGFLSGESGLLLQRIAGVFIILMGFFVAGWLKINWFMSEKRMSFKPR 130
Query: 230 AAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVA 289
+ S + AG+ FA +PC P+ A++L + + P G + Y G++
Sbjct: 131 RSF----SYAGTWFAGMGFAAGWTPCIGPIFASIL--MLAASQPTQGVLYTVVYVLGFIL 184
Query: 290 PLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGG--LYT-FLDRL 334
P L + F G+ + +L K+S I GA+++ G LYT ++ R+
Sbjct: 185 PFLAFSFFLGSTRIIL---KYSGQIMKAGGAMMIVAGALLYTGYMTRI 229
>gi|354582528|ref|ZP_09001429.1| cytochrome c biogenesis protein transmembrane region [Paenibacillus
lactis 154]
gi|353198820|gb|EHB64286.1| cytochrome c biogenesis protein transmembrane region [Paenibacillus
lactis 154]
Length = 237
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 108/235 (45%), Gaps = 25/235 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAF---------GSGKSRAQIIGDSIAFSLG 170
++ + F AG + +SPC L + P L I + R + + ++AF LG
Sbjct: 5 NVGIAFAAGFASFISPCCLPLYPSYLSIITGMSVNDLKNEQNRKEVRFRTMTHTLAFILG 64
Query: 171 LATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRA 230
+ LG GA G+ + + + ++ L IVMGL L+ I + F +
Sbjct: 65 FSAVYYTLGWGAGLFGEFFMEYQDLIRQLSALLIIVMGLMLVGIFQ-------PRFLMKD 117
Query: 231 AAANFPSS----VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTG 286
NF S + +L G+ FA SPC P+L ++ A+ DP L+ SY+ G
Sbjct: 118 RKFNFKSKPTGYIGTFLFGIGFAAGWSPCVGPILTAIIALAAS--DPGTWFPLITSYSLG 175
Query: 287 YVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFPTTMAM 341
+ P + A F G+ + +L K+SS + + G L++ G+ F D+++ T+ +
Sbjct: 176 FAVPFFILAFFIGSTRWIL---KYSSILMKVGGILMILMGILLFTDQMYKITIWL 227
>gi|253995532|ref|YP_003047596.1| cytochrome c biogenesis protein transmembrane region [Methylotenera
mobilis JLW8]
gi|253982211|gb|ACT47069.1| cytochrome c biogenesis protein transmembrane region [Methylotenera
mobilis JLW8]
Length = 614
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASF 184
F AGL+ + +PC ++P+ I + +R S+A++LG+ T L G+ A
Sbjct: 197 FTAGLLLAFTPCVFPMIPILSSIIIGKNAHVTRLHAFNLSLAYTLGMCLTYTLAGIAAGL 256
Query: 185 AGKAYGQ-IGTGLPLAASGLAIVM-GLNLLEIIELQLPSFFDN----FDPRAAAANFPSS 238
+G+ + T L L V+ L++ EL+LPS +N R F S
Sbjct: 257 SGQMLSSALQTPWALGFGALIFVLLALSMFGFYELKLPSGMENGLMNLSRRIKGGRFFSD 316
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFA 298
+L G+ AL SPC LA L Y++ + D ++GG L S + G PLLL + A
Sbjct: 317 ---FLMGVLSALIISPCVAAPLAGALLYISKTNDVVLGGVALFSLSVGMGTPLLLIGASA 373
Query: 299 GALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
G L K SW+N + G L+LG ++
Sbjct: 374 GTL-----LPKVGSWMNAVRNLFGVLMLGVAIW 401
>gi|172057140|ref|YP_001813600.1| cytochrome c biogenesis protein transmembrane region
[Exiguobacterium sibiricum 255-15]
gi|171989661|gb|ACB60583.1| cytochrome c biogenesis protein transmembrane region
[Exiguobacterium sibiricum 255-15]
Length = 232
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 103/221 (46%), Gaps = 14/221 (6%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFG------SGKSRAQIIGDSIAFSLGLAT 173
SL + FGAGL++ +SPCTL + P+ L YI G + + ++AF +G A
Sbjct: 4 SLWLAFGAGLLSFVSPCTLPLYPVFLSYITGVSVTDLKEKGVREKRSLLHTVAFLVGFAM 63
Query: 174 TLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAA 233
A+LG+ S + L + + + V G+ LL + + P F
Sbjct: 64 VFAVLGLSTSLLADVFITYRDTLRMVGALVIFVFGVVLLGLWQ---PKFLMREKKLNLGE 120
Query: 234 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
+ L G+ FA +PC+ P+LA ++G AT +P G +L Y G+ P LL
Sbjct: 121 RKGGYIGTILVGIGFAAGWTPCTGPILAGVIGLAAT--NPSQGMLYMLFYVLGFSIPFLL 178
Query: 294 AASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
A F G +S L F ++S + GAL++ G+ + D L
Sbjct: 179 MAFFVG--RSRL-FVQYSLKLTKFGGALMMLFGIVLYFDGL 216
>gi|222529878|ref|YP_002573760.1| cytochrome c biogenesis protein transmembrane protein
[Caldicellulosiruptor bescii DSM 6725]
gi|222456725|gb|ACM60987.1| cytochrome c biogenesis protein transmembrane region
[Caldicellulosiruptor bescii DSM 6725]
Length = 215
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 15/212 (7%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAG 186
AG ++ SPC L ++P+ + Y+ F SR + +S+ F LG + +LGV A+ G
Sbjct: 11 AGFLSFFSPCILPLIPVYVLYL--FSQKGSRLK---NSLLFVLGFSIVFVVLGVLAAVVG 65
Query: 187 KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDN-FDPRAAAANFPSSVQAYLAG 245
+ L A+ + ++MGL +L++ P F F P +N + + G
Sbjct: 66 SVFSGYSFVLKKIAAIVIVLMGLVMLDLS----PDFLKRIFIPIQGKSNLNINASPLILG 121
Query: 246 LTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLL 305
+ +++ SPC PVL ++L A SK L G LL Y+ G+ P L+++ L++
Sbjct: 122 MVLSISWSPCVGPVLTSILSMAAISKTLLKGAMLLFIYSMGFAVPFLISSFLIDRLKA-- 179
Query: 306 SF---RKFSSWINPMSGALLLGGGLYTFLDRL 334
SF ++S I +GALL+ G+ F D++
Sbjct: 180 SFGMLNRYSRAIEYFTGALLIAFGMLAFFDKI 211
>gi|241204567|ref|YP_002975663.1| cytochrome C biogenesis protein transmembrane region [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240858457|gb|ACS56124.1| cytochrome c biogenesis protein transmembrane region [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 249
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 99/215 (46%), Gaps = 18/215 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAF------GSG------KSRAQIIGDSIAFSLGLATT 174
AG ++ LSPC L ++P L Y+ G G R + ++ F+LG AT
Sbjct: 14 AGALSFLSPCVLPLVPPYLCYMAGISVEQFRGGGAVAVAPDVRRGVFFSALLFTLGFATV 73
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
LG GAS G Q L + IVMGLN L + + + + + R +
Sbjct: 74 FVALGAGASSIGMVLRQHLDLLSKIGGLIIIVMGLNFLGLFRIGVLAR----EARFQGSG 129
Query: 235 FPSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
P+++ AY+ GL FA +PC PVL +LG A+ + G LL Y+ G P +
Sbjct: 130 KPATLTGAYIMGLAFAFGWTPCIGPVLGAILGVAASRETVGSGAGLLAIYSLGLAIPFWI 189
Query: 294 AASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
AA F+G+ LS FR+ + + G L+ GL
Sbjct: 190 AAGFSGSFMRFLSRFRRHLGTVEKVMGLFLVLTGL 224
>gi|407779965|ref|ZP_11127214.1| cytochrome c biogenesis protein, transmembrane region
[Nitratireductor pacificus pht-3B]
gi|407298220|gb|EKF17363.1| cytochrome c biogenesis protein, transmembrane region
[Nitratireductor pacificus pht-3B]
Length = 244
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 100/211 (47%), Gaps = 20/211 (9%)
Query: 133 LSPCTLSVLPLTLGYIGAFG----------SGKSRAQIIGDSIAFSLGLATTLALLGVGA 182
+SPC L ++P L ++ +G+ R +II +IAF LG T LG A
Sbjct: 18 VSPCVLPIVPPYLAWLAGLSFEELNADTLQAGRRR-RIILAAIAFVLGFTTVFVALGATA 76
Query: 183 SFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ-A 241
S G+ Q L + A + I+MGL+ L + + L + R P+ + +
Sbjct: 77 SLIGRTIAQYFDVLSVIAGVIIIIMGLHFLGVFRIAL----LYREARVQVTRKPAGLAGS 132
Query: 242 YLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPLLLAASFAGA 300
++ GL FA +PC PVLA +L +VA S+ G +LL+ Y+ G P +LAA FA
Sbjct: 133 FVMGLAFAFGWTPCVGPVLAAIL-FVAGSEGSAARGAMLLAVYSLGIGIPFILAAVFASR 191
Query: 301 -LQSLLSFRKFSSWIN-PMSGALLLGGGLYT 329
L FRK I M G L+L G L+
Sbjct: 192 FLGWAARFRKHMHKIEMAMGGLLVLTGILFV 222
>gi|73668176|ref|YP_304191.1| cytochrome c-type biogenesis protein [Methanosarcina barkeri str.
Fusaro]
gi|72395338|gb|AAZ69611.1| cytochrome c-type biogenesis protein [Methanosarcina barkeri str.
Fusaro]
Length = 216
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 98/207 (47%), Gaps = 16/207 (7%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASF 184
FGAG+++ LSPC L +LP L A +GK+R + +A LG++ + ++GV S
Sbjct: 12 FGAGIISVLSPCILPLLPAVL----ATSAGKNRLR----PLAIVLGVSISFTIMGVATSA 63
Query: 185 AGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLA 244
G + L + A L +V+G LL ++ L + F F P V +L
Sbjct: 64 FGAVFSAYTDQLKILAEVLILVLGFALL--FDISLFNAFSKF-PLMGKMGDEGPVSGFLL 120
Query: 245 GLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSL 304
GL+ + PC P+L ++L VA + + G LL Y+ G+ P+LL A A S
Sbjct: 121 GLSLGVLWIPCVGPILGSILTMVALEGNAITGALTLLVYSLGFAIPMLLLAYSAHFSSS- 179
Query: 305 LSFRKFSSW---INPMSGALLLGGGLY 328
R S W +G +L+ GLY
Sbjct: 180 -KIRLISKWDVVFKKGAGTILVLFGLY 205
>gi|262038706|ref|ZP_06012066.1| putative cytochrome c-type biogenesis protein [Leptotrichia
goodfellowii F0264]
gi|261747258|gb|EEY34737.1| putative cytochrome c-type biogenesis protein [Leptotrichia
goodfellowii F0264]
Length = 214
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 16/181 (8%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGAS 183
+F GLV+ SPC ++P+ Y+G GK R I ++ F LGL+ T LG G
Sbjct: 11 VFLGGLVSFFSPCIFPIVPI---YLGILSKGK-RTVI--NTFLFILGLSLTFVSLGFGFG 64
Query: 184 FAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF---PSSVQ 240
F GK + + + A + I++G++ + I++ + + A N SS++
Sbjct: 65 FLGKIF--FSDTVRIVAGIIVIILGIHQMGILKFKQLE-----KTKLVAFNTAGKSSSLE 117
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGA 300
A L GLTF+L +PC P+L ++L + GG ++ Y G P +L + F+
Sbjct: 118 ALLLGLTFSLGWTPCVGPILTSVLALSGDKGSAVYGGMMMFIYVLGLATPFVLFSFFSNE 177
Query: 301 L 301
L
Sbjct: 178 L 178
>gi|329889582|ref|ZP_08267925.1| cytochrome C biogenesis protein transmembrane region family protein
[Brevundimonas diminuta ATCC 11568]
gi|328844883|gb|EGF94447.1| cytochrome C biogenesis protein transmembrane region family protein
[Brevundimonas diminuta ATCC 11568]
Length = 650
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 95/196 (48%), Gaps = 13/196 (6%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIG--AFGSGKSRAQIIGDSIAFSLGLATTLALLGVGA 182
FG G++ + +PC + P+ G IG G G R ++ S+A+ LGLA LLGV A
Sbjct: 237 FGFGVLLAFTPCVFPMYPILAGVIGRGVDGQGTRRGLLL--SVAYVLGLAVAFGLLGVAA 294
Query: 183 SFAGKAYGQIGTGLPLAASGLAI---VMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
+++G+ Q+ P A GLA+ V+ +++ ELQLPS + + R S V
Sbjct: 295 AWSGQNL-QMVLQSPWAVGGLAVVFTVLAVSMFGAFELQLPSAWTSRLSRDTGTGRRSVV 353
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
A G AL A PC T LA L Y+A + D L+G L G PL++ F
Sbjct: 354 SASGLGFLSALIAGPCVTAPLAGALLYIAQTGDVLLGAAALFFLGLGKGVPLIV---FGA 410
Query: 300 ALQSLLSFRKFSSWIN 315
A L K +W+N
Sbjct: 411 AGARFLP--KAGAWMN 424
>gi|153209041|ref|ZP_01947220.1| thiol:disulfide interchange protein DsbD [Coxiella burnetii 'MSU
Goat Q177']
gi|165924028|ref|ZP_02219860.1| thiol:disulfide interchange protein DsbD [Coxiella burnetii Q321]
gi|212217953|ref|YP_002304740.1| thiol:disulfide interchange protein [Coxiella burnetii CbuK_Q154]
gi|120575523|gb|EAX32147.1| thiol:disulfide interchange protein DsbD [Coxiella burnetii 'MSU
Goat Q177']
gi|165916532|gb|EDR35136.1| thiol:disulfide interchange protein DsbD [Coxiella burnetii Q321]
gi|212012215|gb|ACJ19595.1| thiol:disulfide interchange protein [Coxiella burnetii CbuK_Q154]
Length = 630
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 105/234 (44%), Gaps = 22/234 (9%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLAL 177
F L FG GL+ S +PC L ++P+ G I G K + G S+ + LG+A T A+
Sbjct: 221 FFVLLSFFGFGLLLSFTPCVLPMIPVLSGII--VGQQKYPKRAFGLSLMYVLGMAITYAI 278
Query: 178 LGVGASFAGKAYGQIGTGLPLAA---SGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
GV F G Q P S L I M L+L + +LQLP + R A A+
Sbjct: 279 AGVIFGFIGSTV-QAAFQNPWLIGLFSLLFIAMALSLFGLYDLQLP---QRWQTRLAQAS 334
Query: 235 FPSSVQAYLA----GLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAP 290
YL G L SPC TP L +LGY++ + + +GG L + G AP
Sbjct: 335 DRQKHGTYLGTALMGALSTLILSPCVTPALVGVLGYISHTGNASLGGVALFTMGLGMGAP 394
Query: 291 LLLAASFAGALQSLLSFRKFSSW---INPMSGALLLGGGLYTFLDRLFPTTMAM 341
LLL +F+ K W I + G L+L ++ L R+ P T+ M
Sbjct: 395 LLLLGAFSRKW-----LPKAGPWMTVIKHILGVLMLAVAVW-LLARILPGTVTM 442
>gi|215919238|ref|NP_820704.2| thiol:disulfide interchange protein [Coxiella burnetii RSA 493]
gi|206584122|gb|AAO91218.2| thiol:disulfide interchange protein [Coxiella burnetii RSA 493]
Length = 630
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 105/234 (44%), Gaps = 22/234 (9%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLAL 177
F L FG GL+ S +PC L ++P+ G I G K + G S+ + LG+A T A+
Sbjct: 221 FFVLLSFFGFGLLLSFTPCVLPMIPVLSGII--VGQQKYPKRAFGLSLMYVLGMAITYAI 278
Query: 178 LGVGASFAGKAYGQIGTGLPLAA---SGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
GV F G Q P S L I M L+L + +LQLP + R A A+
Sbjct: 279 AGVIFGFIGSTV-QAAFQNPWLIGLFSLLFIAMALSLFGLYDLQLP---QRWQTRLAQAS 334
Query: 235 FPSSVQAYLA----GLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAP 290
YL G L SPC TP L +LGY++ + + +GG L + G AP
Sbjct: 335 DRQKHGTYLGTALMGALSTLILSPCVTPALVGVLGYISHTGNASLGGVALFTMGLGMGAP 394
Query: 291 LLLAASFAGALQSLLSFRKFSSW---INPMSGALLLGGGLYTFLDRLFPTTMAM 341
LLL +F+ K W I + G L+L ++ L R+ P T+ M
Sbjct: 395 LLLLGAFSRKW-----LPKAGPWMTVIKHILGVLMLAVAVW-LLARILPGTVTM 442
>gi|113955230|ref|YP_730700.1| biogenesis protein [Synechococcus sp. CC9311]
gi|113882581|gb|ABI47539.1| biogenesis protein [Synechococcus sp. CC9311]
Length = 282
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 92/177 (51%), Gaps = 11/177 (6%)
Query: 122 AVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVG 181
A+ FG GL+ S+SPC L++LP+ L Y+GA K + G I FSLG+ T ++LG+
Sbjct: 64 ALAFGGGLIASVSPCVLALLPVQLSYLGA---QKQQRPNPGKVIQFSLGVVTAYSILGLF 120
Query: 182 ASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSF-FDNFDPRA-AAANFPSSV 239
S AG GL + A + I M L L + P F + D A AA + V
Sbjct: 121 TSLAGALIIDYRGGLFITAGVIVIAMALQL----KGWGPRFPWHRLDIGAIAAPGLINRV 176
Query: 240 QA--YLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
A +L G TFAL SPC++PVLA +L A + P + ++ Y GY +LLA
Sbjct: 177 PAGPFLIGFTFALVTSPCASPVLAAVLSASAATSSPPLAVAAMVLYAIGYSMVILLA 233
>gi|407475165|ref|YP_006789565.1| cytochrome c biogenesis protein, transmembrane region, dsbD family
[Clostridium acidurici 9a]
gi|407051673|gb|AFS79718.1| cytochrome c biogenesis protein, transmembrane region, dsbD family
[Clostridium acidurici 9a]
Length = 232
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 12/223 (5%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSG------KSRAQIIGDSIAFSLGLA 172
S + FGAG ++ SPC L ++P+ + Y+ GS K R + +I F +G
Sbjct: 6 VSTPIAFGAGFLSFFSPCILPLIPVYIMYLT--GSNAQEELEKRRLFALTRTIGFIIGFT 63
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
++G ASF GK + + + + I+ GL + II L + +
Sbjct: 64 IIFMIMGTSASFLGKIFVRNKDVFSKVSGVIIIIFGLKMTGIINLNILNREKRIASPVKV 123
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
N+ SSV L G+ FA +PC PVLA++L Y + G LLL Y+ G P +
Sbjct: 124 TNWFSSV---LMGIVFAAGWTPCFGPVLASILVYAGGTATVSKGVYLLLIYSLGMAVPFI 180
Query: 293 LAASFAGALQSLLSF-RKFSSWINPMSGALLLGGGLYTFLDRL 334
L A F + KF+ ++ +SG +++ G+ F +++
Sbjct: 181 LTALFINIFDKFIKKAEKFTKYLPKISGIVMIIFGILVFFNKV 223
>gi|310816076|ref|YP_003964040.1| cytochrome C biogenesis protein CcdA [Ketogulonicigenium vulgare
Y25]
gi|385233581|ref|YP_005794923.1| cytochrome c biogenesis protein, transmembrane region
[Ketogulonicigenium vulgare WSH-001]
gi|308754811|gb|ADO42740.1| putative cytochrome c-type biogenesis protein CcdA
[Ketogulonicigenium vulgare Y25]
gi|343462492|gb|AEM40927.1| cytochrome c biogenesis protein, transmembrane region
[Ketogulonicigenium vulgare WSH-001]
Length = 251
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 94/202 (46%), Gaps = 10/202 (4%)
Query: 133 LSPCTLSVLPLTLGYIGAFGSGK------SRAQIIGDSIAFSLGLATTLALLGVGASFAG 186
LSPC L ++P L Y+G +R ++ ++ F +GL+T LLG S G
Sbjct: 28 LSPCVLPIVPPYLAYMGGVSVNDMSEDKAARRAVMLSALFFVMGLSTVFLLLGFAFSAMG 87
Query: 187 KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGL 246
+ + Q L A + + GL+ + I+ + + D A S++ AY+ GL
Sbjct: 88 RVFLQYQDVTLLVAGIVIMFFGLHFMNILRIPFLAREARLD---AGDRGGSALGAYVLGL 144
Query: 247 TFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLS 306
FA +PC P+L +LG A+ D G +L Y G P LL A+F L+ ++
Sbjct: 145 AFAFGWTPCLGPILGAILGLAASGADMGRGTLMLAFYAAGLGIPFLLVAAFFPKLKGPMA 204
Query: 307 F-RKFSSWINPMSGALLLGGGL 327
F R+ + +SG +L GL
Sbjct: 205 FLRRHMERVERISGLMLWTVGL 226
>gi|146279921|ref|YP_001170079.1| hypothetical protein Rsph17025_3920 [Rhodobacter sphaeroides ATCC
17025]
gi|145558162|gb|ABP72774.1| hypothetical protein Rsph17025_3920 [Rhodobacter sphaeroides ATCC
17025]
Length = 245
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 13/182 (7%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRA----------QIIGDSIAFSLGLATTLA 176
AGL++ LSPC L ++P L Y+ + R +++ ++AF+LG+ T
Sbjct: 12 AGLLSFLSPCILPMVPFYLCYMAGISMHEMRGAAGIAPGAQRRLVASALAFALGVTTIFV 71
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
LLG+GA+ G+A+ + L A+G+ + GL+ L ++ + + RA ++F
Sbjct: 72 LLGLGATALGQAFARWKEPLSYVAAGVLFLFGLHFLGLLRIPFLYREARIESRAEPSSF- 130
Query: 237 SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
+ AY+ GL F +PC P LA +L + + G +LLL+Y P +LAA
Sbjct: 131 --LGAYVMGLAFGFGWTPCVGPALAAILMIASGMGELWRGASLLLTYGLAMTLPFVLAAL 188
Query: 297 FA 298
FA
Sbjct: 189 FA 190
>gi|154706624|ref|YP_001423704.1| thiol:disulfide interchange protein [Coxiella burnetii Dugway
5J108-111]
gi|154355910|gb|ABS77372.1| thiol:disulfide interchange protein [Coxiella burnetii Dugway
5J108-111]
Length = 630
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 105/234 (44%), Gaps = 22/234 (9%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLAL 177
F L FG GL+ S +PC L ++P+ G I G K + G S+ + LG+A T A+
Sbjct: 221 FFVLLSFFGFGLLLSFTPCVLPMIPVLSGII--VGQQKYPKRAFGLSLMYVLGMAITYAI 278
Query: 178 LGVGASFAGKAYGQIGTGLPLAA---SGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
GV F G Q P S L I M L+L + +LQLP + R A A+
Sbjct: 279 AGVIFGFIGSTV-QAAFQNPWLIGLFSLLFIAMALSLFGLYDLQLPQ---RWQTRLAQAS 334
Query: 235 FPSSVQAYLA----GLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAP 290
YL G L SPC TP L +LGY++ + + +GG L + G AP
Sbjct: 335 DRQKHGTYLGTALMGALSTLILSPCVTPALVGVLGYISHTGNASLGGVALFTMGLGMGAP 394
Query: 291 LLLAASFAGALQSLLSFRKFSSW---INPMSGALLLGGGLYTFLDRLFPTTMAM 341
LLL +F+ K W I + G L+L ++ L R+ P T+ M
Sbjct: 395 LLLLGAFSRKW-----LPKAGPWMTVIKHILGVLMLAVAVW-LLARILPGTVTM 442
>gi|149183279|ref|ZP_01861721.1| cytochrome c-type biogenesis protein (holocytochrome-c synthase)
[Bacillus sp. SG-1]
gi|148849006|gb|EDL63214.1| cytochrome c-type biogenesis protein (holocytochrome-c synthase)
[Bacillus sp. SG-1]
Length = 235
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 102/217 (47%), Gaps = 15/217 (6%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFG-------SGKSRAQIIGDSIAFSLGLATTLAL 177
FGAG ++ +SPC L + P L YI + K + + + +I F +G ++ +
Sbjct: 10 FGAGFLSFISPCCLPLYPAFLSYITGMSVSDLKNENVKLQKRSLIHTILFLIGFSSIFVV 69
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
LG +F G Q + + ++ GL ++ + + Q+ F+ + A +
Sbjct: 70 LGFSTTFLGNVLFQYEDIIRQVGAIFIVIFGLMVIGVFQPQVLMKDRKFEFKNRPAGYAG 129
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
SV L G+ FA +PC+ P+L ++ + T +P G + SY G+ P L+ + F
Sbjct: 130 SV---LIGMAFAAGWTPCTGPILGAVISLIGT--NPGSGMIYMTSYALGFAIPFLILSFF 184
Query: 298 AGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
G +Q + RK ++ I + G +++ G+ F D L
Sbjct: 185 VGKMQWI---RKNNAKIMKVGGYIMILVGIMLFFDWL 218
>gi|315646303|ref|ZP_07899423.1| cytochrome c biogenesis protein transmembrane region [Paenibacillus
vortex V453]
gi|315278502|gb|EFU41818.1| cytochrome c biogenesis protein transmembrane region [Paenibacillus
vortex V453]
Length = 237
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 108/235 (45%), Gaps = 25/235 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAF---------GSGKSRAQIIGDSIAFSLG 170
++ + F AG + +SPC L + P L I + R + + ++AF LG
Sbjct: 5 NIGIAFAAGFASFISPCCLPLYPSYLSIITGMSVNDLKNEQNRKEVRFRTMTHTLAFILG 64
Query: 171 LATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRA 230
+ LG GA G+ + + + ++ L IVMGL L+ + + F +
Sbjct: 65 FSAVYYTLGWGAGLFGEFFTEYQDLIRQLSALLIIVMGLMLIGLFQ-------PKFLMKD 117
Query: 231 AAANFPSS----VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTG 286
NF S + +L G+ FA SPC P+L ++ A+ DP L+ SY+ G
Sbjct: 118 RKFNFKSKPTGYIGTFLFGIGFAAGWSPCVGPILTAIIALAAS--DPGTWFPLITSYSLG 175
Query: 287 YVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFPTTMAM 341
+ P + A F G+ + +L K+SS + + G L++ G+ F D+++ T+ +
Sbjct: 176 FAVPFFILAFFIGSTRWIL---KYSSTLMKVGGILMILMGVLLFTDQMYKITIWL 227
>gi|328950515|ref|YP_004367850.1| cytochrome c biogenesis protein transmembrane region, partial
[Marinithermus hydrothermalis DSM 14884]
gi|328450839|gb|AEB11740.1| cytochrome c biogenesis protein transmembrane region [Marinithermus
hydrothermalis DSM 14884]
Length = 255
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 83/175 (47%), Gaps = 14/175 (8%)
Query: 157 RAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIE 216
R Q+ S+AF +GL+ LG A G L + A ++MGL +L +I
Sbjct: 21 RLQVTLHSLAFVMGLSLVFIALGFSAGLVSDFLFSFGDALRIGAGVFLVLMGLVMLRVI- 79
Query: 217 LQLPSFFDNFDPRAAAANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLI 275
P F D R A PS + + L G+ F +PC P+LA +L TS PL
Sbjct: 80 ---PIPFLQRDLRLHLARKPSGYLGSMLVGVAFGAGWTPCVGPILAGILVIAGTSGSPLQ 136
Query: 276 GGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSW---INPMSGALLLGGGL 327
GG LL SY+ G+ P L+AA Q L +RK + + + + G LL+G G+
Sbjct: 137 GGLLLASYSLGFAIPFLIAA------QMLTYWRKLNRYTLLVERIGGVLLIGVGV 185
>gi|150017818|ref|YP_001310072.1| cytochrome C biogenesis transmembrane protein [Clostridium
beijerinckii NCIMB 8052]
gi|149904283|gb|ABR35116.1| cytochrome c biogenesis protein, transmembrane region [Clostridium
beijerinckii NCIMB 8052]
Length = 234
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 15/224 (6%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGY-----IGAFGSGKSRAQIIGDSIAFSLGLATT 174
S+ + F AGL++ LSPC L ++P + Y I GK++ + S F LG +
Sbjct: 5 SILLAFSAGLLSFLSPCVLPLVPAYISYLTDSSIKELKEGKTKLFTLYKSFGFVLGFSII 64
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQL---PSFFDNFDPRAA 231
L+GV + GK + L IV GL+ + +++L F +FD
Sbjct: 65 FILMGVSVTSLGKLFITHKDLFRKFGGILIIVFGLHTTGVFKIKLFYQEKRFLHFDKIKG 124
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
P S + + G+ FA +PC P+L+++L Y A G LL+ Y+ G P
Sbjct: 125 ----PFS--SIIIGMAFAAGWTPCIGPILSSILIYAANMDSMDKGILLLIMYSIGLAVPF 178
Query: 292 LLAA-SFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
+L A + G + F K+ ++ +SG L++ G+ F ++L
Sbjct: 179 ILTALAIEGFAEQFKKFSKYLPIVSTISGILMVIMGVMIFTNKL 222
>gi|167756104|ref|ZP_02428231.1| hypothetical protein CLORAM_01624 [Clostridium ramosum DSM 1402]
gi|365832859|ref|ZP_09374386.1| hypothetical protein HMPREF1021_03150 [Coprobacillus sp. 3_3_56FAA]
gi|167704096|gb|EDS18675.1| antioxidant, AhpC/TSA family [Clostridium ramosum DSM 1402]
gi|365259989|gb|EHM89964.1| hypothetical protein HMPREF1021_03150 [Coprobacillus sp. 3_3_56FAA]
Length = 386
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 5/218 (2%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGK--SRAQIIGDSIAFSLGLATTLAL 177
SLA++F GLV+ LSPC L ++P+ +GY+ + K S +++ +I+F G+ + L
Sbjct: 6 SLALVFVEGLVSFLSPCVLPIIPIYMGYLAGNSNEKRNSNKKVLLFTISFIFGILLAIFL 65
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
+ + + T L +++G+ L I++ F N +
Sbjct: 66 MNASINLLQSFLKEHMTLFVRIGGILIVLLGIYQLGFIKINFLQ--RTFRFSLKTDNKMN 123
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
+ A++ G TF+ A +PC P L+++L A+S D L++ Y G+ P L+ F
Sbjct: 124 VMVAFIMGFTFSFAWTPCIGPALSSILLLAASSGDFWYSNFLMIIYAFGFTLPFLVLGLF 183
Query: 298 AG-ALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
AL L S R + + +L+ GL F +L
Sbjct: 184 TNKALNWLNSHRDIVKYTTKIGAVILIIFGLMMFSGKL 221
>gi|237734088|ref|ZP_04564569.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|229382914|gb|EEO33005.1| conserved hypothetical protein [Coprobacillus sp. D7]
Length = 386
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 5/218 (2%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGK--SRAQIIGDSIAFSLGLATTLAL 177
SLA++F GLV+ LSPC L ++P+ +GY+ + K S +++ +I+F G+ + L
Sbjct: 6 SLALVFVEGLVSFLSPCVLPIIPIYMGYLAGNSNEKRNSNKKVLLFTISFIFGILLAIFL 65
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
+ + + T L +++G+ L I++ F N +
Sbjct: 66 MNASINLLQSFLKEHMTLFVRIGGILIVLLGIYQLGFIKINFLQ--RTFRFSLKTDNKMN 123
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
+ A++ G TF+ A +PC P L+++L A+S D L++ Y G+ P L+ F
Sbjct: 124 VMVAFIMGFTFSFAWTPCIGPALSSILLLAASSGDFWYSNFLMIIYAFGFTLPFLVLGLF 183
Query: 298 AG-ALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
AL L S R + + +L+ GL F +L
Sbjct: 184 TNKALNWLNSHRDIVKYTTKIGAVILIIFGLMMFSGKL 221
>gi|261400720|ref|ZP_05986845.1| thiol:disulfide interchange protein DsbD [Neisseria lactamica ATCC
23970]
gi|269209483|gb|EEZ75938.1| thiol:disulfide interchange protein DsbD [Neisseria lactamica ATCC
23970]
Length = 613
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 203 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 260
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 261 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 319
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 320 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 376
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 377 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 411
>gi|374624297|ref|ZP_09696714.1| hypothetical protein HMPREF0978_00034 [Coprobacillus sp.
8_2_54BFAA]
gi|373915580|gb|EHQ47328.1| hypothetical protein HMPREF0978_00034 [Coprobacillus sp.
8_2_54BFAA]
Length = 386
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 5/218 (2%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGK--SRAQIIGDSIAFSLGLATTLAL 177
SLA++F GLV+ LSPC L ++P+ +GY+ + K S +++ +I+F G+ + L
Sbjct: 6 SLALVFVEGLVSFLSPCVLPIIPIYMGYLAGNSNEKRNSNKKVLLFTISFIFGILLAIFL 65
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
+ + + T L +++G+ L I++ F N +
Sbjct: 66 MNASINLLQSFLKEHMTLFVRIGGILIVLLGIYQLGFIKINFLQ--RTFRFSLKTDNKMN 123
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
+ A++ G TF+ A +PC P L+++L A+S D L++ Y G+ P L+ F
Sbjct: 124 VMVAFIMGFTFSFAWTPCIGPALSSILLLAASSGDFWYSNFLMIIYAFGFTLPFLVLGLF 183
Query: 298 AG-ALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
AL L S R + + +L+ GL F +L
Sbjct: 184 TNKALNWLNSHRDIVKYTTKIGAVILIIFGLMMFSGKL 221
>gi|86157019|ref|YP_463804.1| cytochrome c biogenesis protein, transmembrane
region/thioredoxin-related [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85773530|gb|ABC80367.1| cytochrome c biogenesis protein, transmembrane
region/Thioredoxin-related protein [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 471
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 91/182 (50%), Gaps = 11/182 (6%)
Query: 108 AVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAF 167
A+L + S L+F AV F G+ TSL+PC ++P+T+ GA +G SR + + S +
Sbjct: 39 ALLAEGSILAF---AVAFAGGVATSLTPCVYPLIPITVSIFGARKAG-SRGEAMAVSALY 94
Query: 168 SLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIV---MGLNLLEIIELQLPSFFD 224
LG+A + LGVGA+ GKA+G + P +AIV M ++ ELQLP
Sbjct: 95 VLGIAAMYSALGVGAALTGKAFGSVMQN-PWVIGFVAIVLAAMAASMFGAFELQLPP--- 150
Query: 225 NFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYT 284
+ R A+ GL + A+PC+ PVLA L +VA G ++ +Y
Sbjct: 151 SLQARLNGVGGAGRAGAFAMGLVSGIIAAPCTGPVLAAALTFVAAKGSVAFGFGIMFAYA 210
Query: 285 TG 286
G
Sbjct: 211 LG 212
>gi|258516652|ref|YP_003192874.1| cytochrome c biogenesis protein transmembrane region
[Desulfotomaculum acetoxidans DSM 771]
gi|257780357|gb|ACV64251.1| cytochrome c biogenesis protein transmembrane region
[Desulfotomaculum acetoxidans DSM 771]
Length = 229
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 105/214 (49%), Gaps = 12/214 (5%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIG----AFGSGKSRAQIIGDSIAFSLGLATT 174
T++A+ FG ++ LSPC L +LP L +I + G + Q + +S+ F LG
Sbjct: 8 TTVALFFG--FLSFLSPCILPLLPGYLSFIAGTDLSNGIRPDKKQTLLNSLFFVLGFGLI 65
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
+ G A G+ L A + I+ GL+ I + + F F + A
Sbjct: 66 FIVFGAAAGSLGQYLTYHRPWLTKLAGLIIIIFGLHTGNIFTINI--LFRQF--KCQAPK 121
Query: 235 FPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
+ A+L G+ FAL +PC PVLA++L +A+ DP G LL +YT G P +LA
Sbjct: 122 LSGRLGAFLLGVCFALGWTPCVGPVLASIL-LLASGSDPARGMLLLTAYTLGLGFPFILA 180
Query: 295 ASFAGALQSLLSFRKF-SSWINPMSGALLLGGGL 327
A G++ L ++ +IN +SGALL+ G+
Sbjct: 181 AMCIGSVHKWLQKTQWLLPYINAVSGALLITMGI 214
>gi|340756869|ref|ZP_08693473.1| cytochrome C biogenesis protein [Fusobacterium varium ATCC 27725]
gi|251834134|gb|EES62697.1| cytochrome C biogenesis protein [Fusobacterium varium ATCC 27725]
Length = 412
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 105/223 (47%), Gaps = 20/223 (8%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGS--------GKSRAQIIGDSIAFSLGL 171
S ++F G+ + SPC + +LP+ + Y+ + ++ ++ +I F LG+
Sbjct: 12 SFILVFLGGIFSFFSPCIIPLLPVYMSYLSGNTAVTDENGNISYNQKKVFIHTIFFILGI 71
Query: 172 ATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAA 231
+ +LG+ S G + + L +++GL Q+ +F R
Sbjct: 72 SAAFFILGLSFSKLGGFFNTNRVLFTRISGALILLLGL-------FQIGLLKSSFMERER 124
Query: 232 AANFPSS----VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGY 287
NF S + A++ G TF+ A +PC PVL+T+L + +K +G L+L Y+ G+
Sbjct: 125 RINFDSKKINPLIAFVIGFTFSFAWTPCIGPVLSTVLIMASGAKTSFLGNMLILVYSLGF 184
Query: 288 VAPLLLAASFAGALQSLLSFRK-FSSWINPMSGALLLGGGLYT 329
+ P LL F + + L +K F + +SGA+L+ G+ T
Sbjct: 185 IIPFLLLGIFTTKVLNFLKTKKSFLKYSIKISGAILIIIGIMT 227
>gi|416160589|ref|ZP_11606207.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis N1568]
gi|325128579|gb|EGC51450.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis N1568]
Length = 613
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 203 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 260
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 261 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 319
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 320 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 376
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 377 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 411
>gi|59801364|ref|YP_208076.1| thiol:disulfide interchange protein [Neisseria gonorrhoeae FA 1090]
gi|194098382|ref|YP_002001440.1| thiol:disulfide interchange protein [Neisseria gonorrhoeae
NCCP11945]
gi|268601142|ref|ZP_06135309.1| thiol:disulfide interchange protein [Neisseria gonorrhoeae PID18]
gi|268603460|ref|ZP_06137627.1| thiol:disulfide interchange protein [Neisseria gonorrhoeae PID1]
gi|291044035|ref|ZP_06569751.1| thiol:disulfide interchange protein [Neisseria gonorrhoeae DGI2]
gi|385335535|ref|YP_005889482.1| thiol:disulfide interchange protein [Neisseria gonorrhoeae
TCDC-NG08107]
gi|59718259|gb|AAW89664.1| putative disulphide isomerase [Neisseria gonorrhoeae FA 1090]
gi|193933672|gb|ACF29496.1| thiol:disulfide interchange protein precursor [Neisseria
gonorrhoeae NCCP11945]
gi|268585273|gb|EEZ49949.1| thiol:disulfide interchange protein [Neisseria gonorrhoeae PID18]
gi|268587591|gb|EEZ52267.1| thiol:disulfide interchange protein [Neisseria gonorrhoeae PID1]
gi|291012498|gb|EFE04487.1| thiol:disulfide interchange protein [Neisseria gonorrhoeae DGI2]
gi|317164078|gb|ADV07619.1| thiol:disulfide interchange protein precursor [Neisseria
gonorrhoeae TCDC-NG08107]
Length = 613
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 203 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 260
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 261 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 319
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 320 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 376
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 377 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 411
>gi|293399225|ref|ZP_06643390.1| thiol:disulfide interchange protein DsbD [Neisseria gonorrhoeae
F62]
gi|291610639|gb|EFF39749.1| thiol:disulfide interchange protein DsbD [Neisseria gonorrhoeae
F62]
Length = 613
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 203 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 260
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 261 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 319
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 320 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 376
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 377 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 411
>gi|161870379|ref|YP_001599551.1| thiol:disulfide interchange protein [Neisseria meningitidis 053442]
gi|385850911|ref|YP_005897426.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis M04-240196]
gi|161595932|gb|ABX73592.1| thiol:disulfide interchange protein DsbD [Neisseria meningitidis
053442]
gi|325205734|gb|ADZ01187.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis M04-240196]
Length = 613
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 203 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 260
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 261 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 319
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 320 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 376
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 377 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 411
>gi|392956042|ref|ZP_10321572.1| cytochrome c-type biogenesis protein CcdA [Bacillus macauensis
ZFHKF-1]
gi|391878284|gb|EIT86874.1| cytochrome c-type biogenesis protein CcdA [Bacillus macauensis
ZFHKF-1]
Length = 235
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 17/222 (7%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFG-------SGKSRAQIIGDSIAFSLGLATTLAL 177
F AGL++ +SPC L + P L YI G + Q + + F LG + +
Sbjct: 9 FAAGLLSFISPCCLPLYPAFLSYITGISVRDLKEEKGMLKRQAMIHTACFLLGFSIIFIV 68
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
LG+ +SF G+ + Q GL + + +V GL +L + + PSF D + N P+
Sbjct: 69 LGLSSSFIGQFFVQFKDGLRQIGAIIIVVFGLIILGVFK---PSFLMK-DHKLTFRNRPT 124
Query: 238 S-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
+ + L G+ F+ +PC+ P+LA ++ T P G + Y G+ P L +
Sbjct: 125 GYLGSILIGIGFSAGWTPCTGPILAGVIALAVT--HPGAGMLYMFFYVLGFAVPFLCLSF 182
Query: 297 FAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFPTT 338
F L L ++F+ I G L++ G+ + D + T
Sbjct: 183 F---LDKLSYIKRFNVQIMKSGGVLMVSMGVILYFDWMTKVT 221
>gi|121635190|ref|YP_975435.1| thiol:disulfide interchange protein [Neisseria meningitidis FAM18]
gi|416177266|ref|ZP_11610007.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis M6190]
gi|416191480|ref|ZP_11616106.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis ES14902]
gi|120866896|emb|CAM10655.1| putative disulphide isomerase [Neisseria meningitidis FAM18]
gi|325132664|gb|EGC55349.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis M6190]
gi|325138552|gb|EGC61115.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis ES14902]
Length = 613
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 203 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 260
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 261 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 319
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 320 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 376
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 377 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 411
>gi|385340397|ref|YP_005894269.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis G2136]
gi|416202574|ref|ZP_11619992.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis 961-5945]
gi|325142700|gb|EGC65080.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis 961-5945]
gi|325198641|gb|ADY94097.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis G2136]
Length = 613
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 203 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 260
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 261 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 319
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 320 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 376
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 377 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 411
>gi|385328812|ref|YP_005883115.1| thiol:disulfide interchange protein [Neisseria meningitidis
alpha710]
gi|385857569|ref|YP_005904081.1| membrane protein [Neisseria meningitidis NZ-05/33]
gi|416187026|ref|ZP_11614082.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis M0579]
gi|308389664|gb|ADO31984.1| thiol:disulfide interchange protein precursor [Neisseria
meningitidis alpha710]
gi|325136587|gb|EGC59188.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis M0579]
gi|325208458|gb|ADZ03910.1| membrane protein, putative [Neisseria meningitidis NZ-05/33]
Length = 613
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 203 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 260
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 261 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 319
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 320 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 376
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 377 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 411
>gi|254493576|ref|ZP_05106747.1| thiol:disulfide interchange protein [Neisseria gonorrhoeae 1291]
gi|268598783|ref|ZP_06132950.1| thiol:disulfide interchange protein [Neisseria gonorrhoeae MS11]
gi|268686408|ref|ZP_06153270.1| thiol:disulfide interchange protein [Neisseria gonorrhoeae
SK-93-1035]
gi|226512616|gb|EEH61961.1| thiol:disulfide interchange protein [Neisseria gonorrhoeae 1291]
gi|268582914|gb|EEZ47590.1| thiol:disulfide interchange protein [Neisseria gonorrhoeae MS11]
gi|268626692|gb|EEZ59092.1| thiol:disulfide interchange protein [Neisseria gonorrhoeae
SK-93-1035]
Length = 613
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 203 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 260
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 261 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 319
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 320 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 376
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 377 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 411
>gi|254672346|emb|CBA05538.1| thiol:disulfide interchange protein DsbD [Neisseria meningitidis
alpha275]
Length = 613
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 203 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 260
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 261 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 319
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 320 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 376
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 377 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 411
>gi|167629285|ref|YP_001679784.1| thiol:disulfide interchange protein [Heliobacterium modesticaldum
Ice1]
gi|167592025|gb|ABZ83773.1| thiol:disulfide interchange protein, putative [Heliobacterium
modesticaldum Ice1]
Length = 245
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 12/194 (6%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-------SIAFSLG 170
+ ++ +F GL+TS+ PC LS+ P+ YI G + + GD S++F+LG
Sbjct: 18 WLAMLFVFLGGLLTSIGPCNLSMAPVLFAYIAGTGLNEQQGPSRGDWRRGLTLSLSFTLG 77
Query: 171 LATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRA 230
A T LLG+ +F G +G A+ + ++MGL ++ + +PS F
Sbjct: 78 TACTFVLLGLLIAFVGGLFGFAQQAFIYLAAFVCLLMGLVMVGALPDVVPSLSGLFGRLG 137
Query: 231 -----AAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTT 285
F A+ GL L S C TPVL +LGYV + L G LL Y
Sbjct: 138 QGMGNKGRQFRGHGGAFFLGLFLGLTGSQCGTPVLLAILGYVLSQGALLYGAMLLFLYAI 197
Query: 286 GYVAPLLLAASFAG 299
G PL+ + G
Sbjct: 198 GRGVPLIAIGTVTG 211
>gi|304387074|ref|ZP_07369326.1| thiol:disulfide interchange protein DsbD [Neisseria meningitidis
ATCC 13091]
gi|416182436|ref|ZP_11612062.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis M13399]
gi|304338873|gb|EFM04975.1| thiol:disulfide interchange protein DsbD [Neisseria meningitidis
ATCC 13091]
gi|325134664|gb|EGC57304.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis M13399]
Length = 613
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 203 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 260
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 261 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 319
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 320 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 376
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 377 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 411
>gi|373111907|ref|ZP_09526143.1| hypothetical protein HMPREF9466_00176 [Fusobacterium necrophorum
subsp. funduliforme 1_1_36S]
gi|419840601|ref|ZP_14363989.1| cytochrome C biogenesis protein transmembrane region [Fusobacterium
necrophorum subsp. funduliforme ATCC 51357]
gi|371656766|gb|EHO22087.1| hypothetical protein HMPREF9466_00176 [Fusobacterium necrophorum
subsp. funduliforme 1_1_36S]
gi|386907544|gb|EIJ72251.1| cytochrome C biogenesis protein transmembrane region [Fusobacterium
necrophorum subsp. funduliforme ATCC 51357]
Length = 217
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 108/218 (49%), Gaps = 22/218 (10%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGAS 183
++ AGL++ SPC +LP+ Y+G SG R+ I +I F +GL+++ LLG GA
Sbjct: 11 VYLAGLLSFFSPCIFPLLPV---YLGMLSSGGKRS--ILKTIVFVVGLSSSFVLLGFGA- 64
Query: 184 FAGKAYGQIGTGLP----LAASGLAIVM-GLNLLEIIELQLPSFFDNFDPRAAAANFPSS 238
G +G L SG+ +++ GL ++II+ SF + S
Sbjct: 65 ------GSVGALLTSNTFRVISGVVVILFGLIQMDIIK---ASFLERTKLVELKKKEEDS 115
Query: 239 VQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
+ A+L G TF+L +PC P+L ++L + +P+ G ++ Y G P LL + F
Sbjct: 116 ILGAFLLGFTFSLGWTPCVGPILTSILFLSSGGGNPVYGALMMFIYVLGLATPFLLFSFF 175
Query: 298 AGAL-QSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
+ L + + SF K+ + + G L++ G+ D+L
Sbjct: 176 SEQLGKKMGSFSKYLIPLKRIGGVLIVFMGILLLTDKL 213
>gi|416169437|ref|ZP_11608178.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis OX99.30304]
gi|325130581|gb|EGC53328.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis OX99.30304]
Length = 613
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 203 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 260
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 261 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 319
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 320 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 376
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 377 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 411
>gi|433466559|ref|ZP_20424020.1| disulfide interchange protein DsbD [Neisseria meningitidis 87255]
gi|433509160|ref|ZP_20466032.1| disulfide interchange protein DsbD [Neisseria meningitidis 12888]
gi|433511721|ref|ZP_20468541.1| disulfide interchange protein DsbD [Neisseria meningitidis 4119]
gi|432204669|gb|ELK60708.1| disulfide interchange protein DsbD [Neisseria meningitidis 87255]
gi|432246368|gb|ELL01819.1| disulfide interchange protein DsbD [Neisseria meningitidis 4119]
gi|432247333|gb|ELL02771.1| disulfide interchange protein DsbD [Neisseria meningitidis 12888]
Length = 601
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 191 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 248
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 249 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 307
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 308 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 364
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 365 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 399
>gi|416195998|ref|ZP_11617967.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis CU385]
gi|325140653|gb|EGC63170.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis CU385]
Length = 608
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 198 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 255
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 256 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 314
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 315 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 371
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 372 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 406
>gi|427826122|ref|ZP_18993183.1| thioredoxin family protein [Neisseria meningitidis H44/76]
gi|316986019|gb|EFV64956.1| thioredoxin family protein [Neisseria meningitidis H44/76]
Length = 613
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 203 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 260
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 261 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 319
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 320 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 376
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 377 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 411
>gi|268594635|ref|ZP_06128802.1| thiol:disulfide interchange protein [Neisseria gonorrhoeae 35/02]
gi|268597039|ref|ZP_06131206.1| thiol:disulfide interchange protein [Neisseria gonorrhoeae FA19]
gi|268681940|ref|ZP_06148802.1| thiol:disulfide interchange protein [Neisseria gonorrhoeae PID332]
gi|268548024|gb|EEZ43442.1| thiol:disulfide interchange protein [Neisseria gonorrhoeae 35/02]
gi|268550827|gb|EEZ45846.1| thiol:disulfide interchange protein [Neisseria gonorrhoeae FA19]
gi|268622224|gb|EEZ54624.1| thiol:disulfide interchange protein [Neisseria gonorrhoeae PID332]
Length = 613
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 203 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 260
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 261 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 319
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 320 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 376
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 377 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 411
>gi|385323847|ref|YP_005878286.1| thiol:disulfide interchange protein DsbD (protein-disulfide
reductase; disulfide reductase) [Neisseria meningitidis
8013]
gi|261392234|emb|CAX49754.1| thiol:disulfide interchange protein DsbD (protein-disulfide
reductase; disulfide reductase) [Neisseria meningitidis
8013]
Length = 601
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 191 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 248
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 249 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 307
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 308 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 364
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 365 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 399
>gi|433492909|ref|ZP_20449998.1| disulfide interchange protein DsbD [Neisseria meningitidis NM586]
gi|433495034|ref|ZP_20452100.1| disulfide interchange protein DsbD [Neisseria meningitidis NM762]
gi|433497203|ref|ZP_20454237.1| disulfide interchange protein DsbD [Neisseria meningitidis M7089]
gi|433499270|ref|ZP_20456277.1| disulfide interchange protein DsbD [Neisseria meningitidis M7124]
gi|433501235|ref|ZP_20458219.1| disulfide interchange protein DsbD [Neisseria meningitidis NM174]
gi|433502167|ref|ZP_20459137.1| disulfide interchange protein DsbD [Neisseria meningitidis NM126]
gi|432227204|gb|ELK82915.1| disulfide interchange protein DsbD [Neisseria meningitidis NM586]
gi|432229422|gb|ELK85110.1| disulfide interchange protein DsbD [Neisseria meningitidis NM762]
gi|432232916|gb|ELK88551.1| disulfide interchange protein DsbD [Neisseria meningitidis M7089]
gi|432233697|gb|ELK89323.1| disulfide interchange protein DsbD [Neisseria meningitidis M7124]
gi|432235041|gb|ELK90660.1| disulfide interchange protein DsbD [Neisseria meningitidis NM174]
gi|432242841|gb|ELK98356.1| disulfide interchange protein DsbD [Neisseria meningitidis NM126]
Length = 601
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 191 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 248
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 249 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 307
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 308 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 364
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 365 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 399
>gi|421907269|ref|ZP_16337151.1| thiol:disulfide interchange protein DsbD [Neisseria meningitidis
alpha704]
gi|393291608|emb|CCI73138.1| thiol:disulfide interchange protein DsbD [Neisseria meningitidis
alpha704]
Length = 613
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 203 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 260
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 261 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 319
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 320 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 376
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 377 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 411
>gi|261867935|ref|YP_003255857.1| cytochrome c-type biogenesis protein CcdA [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261413267|gb|ACX82638.1| cytochrome c-type biogenesis protein CcdA [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 213
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 20/183 (10%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGAS 183
+F AGL + LSPC ++P+ Y G G + I ++ F GL+ T LG
Sbjct: 11 VFLAGLASFLSPCIFPIIPI---YFGILAKGGRK---IMNTFLFIAGLSLTFVSLGFSFG 64
Query: 184 FAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS-----S 238
F G + + + A + I++G++ L II+L NF R + S
Sbjct: 65 FLGNLF--FNDNVRIIAGIVVIILGIHQLGIIKL-------NFLERTKVVEVKTEGKSAS 115
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFA 298
+A+ GLTF+L +PC P+LA++L L G +++L Y G P +L + F+
Sbjct: 116 FEAFFLGLTFSLGWTPCIGPILASVLALSGDEGSALYGASMMLVYVLGLATPFVLFSLFS 175
Query: 299 GAL 301
L
Sbjct: 176 QEL 178
>gi|254805285|ref|YP_003083506.1| thiol:disulfide interchange protein [Neisseria meningitidis
alpha14]
gi|254668827|emb|CBA06846.1| Thiol:disulfide interchange protein [Neisseria meningitidis
alpha14]
Length = 613
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 203 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 260
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 261 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 319
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 320 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 376
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 377 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 411
>gi|225619964|ref|YP_002721221.1| thiol-disulfide interchange protein [Brachyspira hyodysenteriae
WA1]
gi|225214783|gb|ACN83517.1| thiol-disulfide interchange protein [Brachyspira hyodysenteriae
WA1]
Length = 580
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS-RAQIIGDSIAFSLGLATTLA 176
F +L +IF AGL + L PCT +L +T+ +G K+ + + S+ F+LG+ TT
Sbjct: 177 FITLILIFAAGLASVLLPCTYPLLSITVSILGTTTDSKNNKKSSVLASLLFALGVITTYT 236
Query: 177 LLGVGASFAGKAY------GQIGTGLPLAASGLAIVM---GLNLLEIIELQLPSFFDNFD 227
LLG S AG A+ G IG P+ + L ++ ++ E++ PSF +
Sbjct: 237 LLGAVVSVAGFAFHKTILFGSIGYN-PIVLTILVLLFLYFTFSMAGFYEIKAPSFLQSAK 295
Query: 228 PRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLL--GYVATSKDPLIGGTLLLSYTT 285
A A S Y+ GL + A+PC+ P++A +L G++ +P+ + Y
Sbjct: 296 TNAYAKKNQSIFHKYIMGLLAGIVATPCAAPIIAVILEIGFL----NPVFATLYMAVYAL 351
Query: 286 GYVAPLLLAASFAGALQSL 304
G+ + L + +FA L +
Sbjct: 352 GFASVLFILGTFASILTKM 370
>gi|268684154|ref|ZP_06151016.1| thiol:disulfide interchange protein [Neisseria gonorrhoeae
SK-92-679]
gi|268624438|gb|EEZ56838.1| thiol:disulfide interchange protein [Neisseria gonorrhoeae
SK-92-679]
Length = 613
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 203 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 260
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 261 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 319
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 320 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 376
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 377 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 411
>gi|434381955|ref|YP_006703738.1| thiol disulfide interchange protein [Brachyspira pilosicoli WesB]
gi|404430604|emb|CCG56650.1| thiol disulfide interchange protein [Brachyspira pilosicoli WesB]
Length = 569
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS-RAQIIGDSIAFSLGLATTLA 176
F +L +IF AGL + L PCT +L +T+ +G K+ + + S+ F+LG+ TT
Sbjct: 166 FITLILIFAAGLASVLLPCTYPLLSITVSILGTTTDEKNNKKSSVLASLLFALGVITTYT 225
Query: 177 LLGVGASFAGKAY------GQIGTGLPLAASGLAIVM---GLNLLEIIELQLPSFFDNFD 227
LLG S AG A+ G IG P+ + L ++ ++ E++ PSF +
Sbjct: 226 LLGAVVSVAGFAFHKTILFGSIGYN-PIVLTILVLLFLYFTFSMAGFYEIKAPSFLQSAK 284
Query: 228 PRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLL--GYVATSKDPLIGGTLLLSYTT 285
A A S Y+ GL + A+PC+ P++A +L G++ +P+ + Y
Sbjct: 285 TNAYAKKNQSIFHKYIMGLLAGIVATPCAAPIIAVILEIGFL----NPVFATLYMAVYAL 340
Query: 286 GYVAPLLLAASFAGALQSL 304
G+ + L + +FA L +
Sbjct: 341 GFASVLFILGTFASILTKM 359
>gi|114762877|ref|ZP_01442309.1| cytochrome c-type biogenesis protein CcdA [Pelagibaca bermudensis
HTCC2601]
gi|114544487|gb|EAU47494.1| cytochrome c-type biogenesis protein CcdA [Roseovarius sp.
HTCC2601]
Length = 250
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGAF------GSGKSRAQIIGDSIAFSLGLATTLA 176
V AG+++ LSPC L ++P L ++ G++R + ++ F LGL+T
Sbjct: 17 VALAAGIISFLSPCVLPIVPPYLAFMSGVSIAEMEAGGRARLRAFTAALFFVLGLSTVFV 76
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
LLG AS+ G + Q L + + IV GL+ L + + F D + R +
Sbjct: 77 LLGFTASWLGMFFLQNQILLARISGVVVIVFGLHFLHVFRI---PFLDR-EARIETGDAG 132
Query: 237 -SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
S+ AY+ GL FA +PC P L +L A+ G LL Y G P LLAA
Sbjct: 133 GSAFGAYILGLAFAFGWTPCIGPQLGAILSMAASEASVARGTALLAVYAAGLGLPFLLAA 192
Query: 296 SF-AGALQSLLSFRKFSSWINPMSGALLLGGGL 327
F + A+ + ++ I + G LL+ GL
Sbjct: 193 VFLSRAMGVMNRLKRHMGLIEKVMGVLLIAVGL 225
>gi|433469700|ref|ZP_20427115.1| disulfide interchange protein DsbD [Neisseria meningitidis 98080]
gi|432202467|gb|ELK58530.1| disulfide interchange protein DsbD [Neisseria meningitidis 98080]
Length = 601
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 191 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 248
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 249 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 307
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 308 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 364
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 365 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 399
>gi|421555165|ref|ZP_16001102.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis 98008]
gi|433473899|ref|ZP_20431258.1| disulfide interchange protein DsbD [Neisseria meningitidis 97021]
gi|433482409|ref|ZP_20439667.1| disulfide interchange protein DsbD [Neisseria meningitidis 2006087]
gi|433484922|ref|ZP_20442136.1| disulfide interchange protein DsbD [Neisseria meningitidis 2002038]
gi|433486717|ref|ZP_20443909.1| disulfide interchange protein DsbD [Neisseria meningitidis 97014]
gi|402331444|gb|EJU66781.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis 98008]
gi|432208828|gb|ELK64800.1| disulfide interchange protein DsbD [Neisseria meningitidis 97021]
gi|432215129|gb|ELK71019.1| disulfide interchange protein DsbD [Neisseria meningitidis 2006087]
gi|432219159|gb|ELK75007.1| disulfide interchange protein DsbD [Neisseria meningitidis 2002038]
gi|432221236|gb|ELK77049.1| disulfide interchange protein DsbD [Neisseria meningitidis 97014]
Length = 601
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 191 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 248
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 249 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 307
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 308 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 364
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 365 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 399
>gi|110678821|ref|YP_681828.1| cytochrome c biogenesis protein [Roseobacter denitrificans OCh 114]
gi|109454937|gb|ABG31142.1| cytochrome c biogenesis protein [Roseobacter denitrificans OCh 114]
Length = 245
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 13/212 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG----------SGKSRAQIIGDSIAFSLGLATTLA 176
AGL++ LSPC L ++P L Y+ G ++R + + + F+ G+ T
Sbjct: 11 AGLLSFLSPCILPMVPFYLSYLAGVGMNQISADAQIDARTRTRAVLAACCFAAGVITIFV 70
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
LG A+ G+ L A+ + I MGL+ L +I + + + A
Sbjct: 71 GLGAAATLFGQVVRDYFDILRWIAAAIIIAMGLHFLGVIRIGV--LYRQLRTDTGGALSV 128
Query: 237 SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
S AY+ GL FA +PC PVLA +L A + G LL Y G AP +LAA
Sbjct: 129 SYAGAYVIGLAFAFGWTPCVGPVLAAILFTAAGADTASTGAWLLFVYGVGMTAPFVLAAL 188
Query: 297 F-AGALQSLLSFRKFSSWINPMSGALLLGGGL 327
F A ++ + FR+ I G +L+ GL
Sbjct: 189 FIAPFMRWMHRFRRHLGRIEKAMGVMLIVFGL 220
>gi|406705965|ref|YP_006756318.1| integral membrane protein, DsbD family [alpha proteobacterium
HIMB5]
gi|406651741|gb|AFS47141.1| integral membrane protein, DsbD family [alpha proteobacterium
HIMB5]
Length = 235
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDS-------IAFSLGLA 172
L + FGAGL++ LSPC VLPL GYI +F SG+S I I F G +
Sbjct: 3 ELVIAFGAGLISFLSPC---VLPLIPGYI-SFVSGQSLKDITEKKEFDLSPLIKFCFGFS 58
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
+ G ASF GK Q L A + I L LL + F N D R
Sbjct: 59 IVFIIFGASASFLGKVLLQNSQSFRLIAGLVIIFFSLQLLGVFNFG----FLNMDKRFDF 114
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPL 291
F S + G F +PC P+L ++L +A+ ++ L LLLS Y+ G P
Sbjct: 115 KKFDSFFFPVVIGFAFGFGWTPCIGPILGSILA-LASIEETLARAILLLSFYSLGLAIPF 173
Query: 292 LLAASFAGALQSLLSFRK-FSSWINPMS 318
+++ +Q L F K S IN +S
Sbjct: 174 IISGY---LIQRFLIFSKNMSKHINTIS 198
>gi|15677372|ref|NP_274527.1| thiol:disulfide interchange protein [Neisseria meningitidis MC58]
gi|385852874|ref|YP_005899388.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis H44/76]
gi|433465471|ref|ZP_20422950.1| disulfide interchange protein DsbD [Neisseria meningitidis NM422]
gi|433487888|ref|ZP_20445057.1| disulfide interchange protein DsbD [Neisseria meningitidis M13255]
gi|433490858|ref|ZP_20447977.1| disulfide interchange protein DsbD [Neisseria meningitidis NM418]
gi|433505350|ref|ZP_20462288.1| disulfide interchange protein DsbD [Neisseria meningitidis 9506]
gi|433507513|ref|ZP_20464418.1| disulfide interchange protein DsbD [Neisseria meningitidis 9757]
gi|14285427|sp|Q9JYM0.1|DSBD_NEIMB RecName: Full=Thiol:disulfide interchange protein DsbD; AltName:
Full=Protein-disulfide reductase; Short=Disulfide
reductase; Flags: Precursor
gi|7226763|gb|AAF41875.1| thiol:disulfide interchange protein DsbD [Neisseria meningitidis
MC58]
gi|325199878|gb|ADY95333.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis H44/76]
gi|432202126|gb|ELK58191.1| disulfide interchange protein DsbD [Neisseria meningitidis NM422]
gi|432224919|gb|ELK80681.1| disulfide interchange protein DsbD [Neisseria meningitidis M13255]
gi|432226624|gb|ELK82350.1| disulfide interchange protein DsbD [Neisseria meningitidis NM418]
gi|432240530|gb|ELK96065.1| disulfide interchange protein DsbD [Neisseria meningitidis 9757]
gi|432240642|gb|ELK96176.1| disulfide interchange protein DsbD [Neisseria meningitidis 9506]
Length = 601
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 191 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 248
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 249 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 307
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 308 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 364
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 365 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 399
>gi|240014296|ref|ZP_04721209.1| thiol:disulfide interchange protein precursor [Neisseria
gonorrhoeae DGI18]
gi|240016731|ref|ZP_04723271.1| thiol:disulfide interchange protein precursor [Neisseria
gonorrhoeae FA6140]
gi|240121859|ref|ZP_04734821.1| thiol:disulfide interchange protein precursor [Neisseria
gonorrhoeae PID24-1]
Length = 601
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 191 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 248
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 249 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 307
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 308 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 364
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 365 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 399
>gi|385341584|ref|YP_005895455.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis M01-240149]
gi|421542808|ref|ZP_15988913.1| membrane protein, putative [Neisseria meningitidis NM255]
gi|433522236|ref|ZP_20478922.1| disulfide interchange protein DsbD [Neisseria meningitidis 61103]
gi|325201790|gb|ADY97244.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis M01-240149]
gi|402316605|gb|EJU52148.1| membrane protein, putative [Neisseria meningitidis NM255]
gi|432258426|gb|ELL13710.1| disulfide interchange protein DsbD [Neisseria meningitidis 61103]
Length = 601
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 191 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 248
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 249 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 307
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 308 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 364
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 365 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 399
>gi|431807122|ref|YP_007234020.1| thiol disulfide interchange protein [Brachyspira pilosicoli
P43/6/78]
gi|430780481|gb|AGA65765.1| thiol disulfide interchange protein [Brachyspira pilosicoli
P43/6/78]
Length = 569
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS-RAQIIGDSIAFSLGLATTLA 176
F +L +IF AGL + L PCT +L +T+ +G K+ + + S+ F+LG+ TT
Sbjct: 166 FITLILIFAAGLASVLLPCTYPLLSITVSILGTTTDSKNNKKSSVLASLLFALGVITTYT 225
Query: 177 LLGVGASFAGKAY------GQIGTGLPLAASGLAIVM---GLNLLEIIELQLPSFFDNFD 227
LLG S AG A+ G IG P+ + L ++ ++ E++ PSF +
Sbjct: 226 LLGAVVSVAGFAFHKTILFGSIGYN-PIVLTILVLLFLYFTFSMAGFYEIKAPSFLQSAK 284
Query: 228 PRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLL--GYVATSKDPLIGGTLLLSYTT 285
A A S Y+ GL + A+PC+ P++A +L G++ +P+ + Y
Sbjct: 285 TNAYAKKNQSIFHKYIMGLLAGIVATPCAAPIIAVILEIGFL----NPVFATLYMAVYAL 340
Query: 286 GYVAPLLLAASFAGALQSL 304
G+ + L + +FA L +
Sbjct: 341 GFASVLFVLGTFASILTKM 359
>gi|226358062|ref|YP_002787801.1| Cytochrome C biogenesis protein transmembrane region (DsbD-like)
(CcdA) [Deinococcus deserti VCD115]
gi|226319705|gb|ACO47699.1| putative Cytochrome C biogenesis protein transmembrane region
(DsbD-like) (CcdA) [Deinococcus deserti VCD115]
Length = 233
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 13/208 (6%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYI-----GAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
FGAGL++ LSPC L +LP LG++ G ++R + ++AF G + LG
Sbjct: 11 FGAGLLSFLSPCVLPMLPAYLGFLTGMSRGELAGPQARRLALSHAVAFLAGFSVVFLALG 70
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
A GT + + + ++MGL L ++ + ++ A + S
Sbjct: 71 ALVESAAVVLTTYGTPVRVIGGAMVLMMGLFTLGVLRVNALYLERRVQLKSKPAGYLGSA 130
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
+ GL FA +PC P+LA +L ++ P +G LLL+Y G+ P LL A F
Sbjct: 131 ---VVGLAFAAGWTPCMGPILAGVL--FMAAQQPALGVPLLLTYALGFSVPFLLGALF-- 183
Query: 300 ALQSLLSFRKFSSWINPMSGALLLGGGL 327
L+ + + +F+ + GAL++ G+
Sbjct: 184 -LERVRALHRFTPRLERAGGALMVVAGI 210
>gi|433537459|ref|ZP_20493954.1| disulfide interchange protein DsbD [Neisseria meningitidis 77221]
gi|432271224|gb|ELL26350.1| disulfide interchange protein DsbD [Neisseria meningitidis 77221]
Length = 601
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 191 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 248
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 249 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 307
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 308 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 364
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 365 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 399
>gi|49475739|ref|YP_033780.1| cytochrome c-type biogenesis protein [Bartonella henselae str.
Houston-1]
gi|49238546|emb|CAF27786.1| Cytochrome c-type biogenesis protein [Bartonella henselae str.
Houston-1]
Length = 262
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 88/198 (44%), Gaps = 17/198 (8%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ-----------IIGDSIAFSLGLA 172
+F AG ++ LSPC L ++P L Y+ G R++ ++ IAF +G
Sbjct: 10 VFFAGALSFLSPCVLPLVPPYLCYMAGIGIDDFRSEKHKGRVFIRWALLSSVIAFVMGFT 69
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
T LG AS GK L+A + I+ GLN L + ++ F + R
Sbjct: 70 TVFVALGASASTIGKLIAYYRDWFALSAGIIIIIFGLNFLGLFKIA----FLFREARFQI 125
Query: 233 ANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
PS + AY+ GL FA +PC P+L ++ T + G LL Y G P
Sbjct: 126 HKRPSGPLGAYVIGLAFAFGWTPCIGPILGPVITLAGTKETVGEGAVLLGVYALGLGVPF 185
Query: 292 LLAASFAGALQSLL-SFR 308
L+AA F+ + L +FR
Sbjct: 186 LIAALFSSSFMRFLGAFR 203
>gi|421540767|ref|ZP_15986906.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis 93004]
gi|421556889|ref|ZP_16002799.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis 80179]
gi|421559518|ref|ZP_16005391.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis 92045]
gi|421563710|ref|ZP_16009526.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis NM2795]
gi|421566909|ref|ZP_16012650.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis NM3001]
gi|402317805|gb|EJU53334.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis 93004]
gi|402335317|gb|EJU70583.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis 92045]
gi|402336143|gb|EJU71405.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis 80179]
gi|402340195|gb|EJU75398.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis NM2795]
gi|402344852|gb|EJU79985.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis NM3001]
Length = 601
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 191 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 248
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 249 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 307
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 308 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 364
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 365 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 399
>gi|421544835|ref|ZP_15990907.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis NM140]
gi|421546920|ref|ZP_15992961.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis NM183]
gi|421549170|ref|ZP_15995188.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis NM2781]
gi|421553100|ref|ZP_15999068.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis NM576]
gi|402322396|gb|EJU57858.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis NM183]
gi|402322628|gb|EJU58080.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis NM140]
gi|402324560|gb|EJU59992.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis NM2781]
gi|402329010|gb|EJU64373.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis NM576]
Length = 601
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 191 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 248
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 249 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 307
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 308 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 364
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 365 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 399
>gi|134096293|ref|YP_001101368.1| thiol:disulfide interchange protein, cytochrome c-type biogenesis,
electron carrier, N-terminal interacts with and
activates DsbC [Herminiimonas arsenicoxydans]
gi|133740196|emb|CAL63247.1| Thiol:disulfide interchange protein dsbD precursor
(Protein-disulfide reductase) (Disulfide reductase)
[Herminiimonas arsenicoxydans]
Length = 586
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 22/194 (11%)
Query: 132 SLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQ 191
+ +PC L ++P+ I G+ R++ + ++ +SLG+A LG+ A G
Sbjct: 195 AFTPCVLPMVPILSSIIIGEGAQTKRSRGLLLAVVYSLGMALVYTCLGLAA-------GW 247
Query: 192 IGTGL------PLAASGLAIVM---GLNLLEIIELQLPSFFDNFDPRAAAANFPSS-VQA 241
+G GL P SG AI+M L++ ++ LQ+P+F + RA+ V
Sbjct: 248 VGEGLSAALQNPWVLSGFAILMVGLALSMFDVYHLQMPAFVQHRLTRASERQSAGKLVGV 307
Query: 242 YLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGAL 301
++ G AL PC LA L Y++ ++D +IGG+ L + G PLLL + AG L
Sbjct: 308 FVMGALSALIVGPCVAAPLAGALLYISQTRDLVIGGSALFAMAIGMSVPLLLVGASAGTL 367
Query: 302 QSLLSFRKFSSWIN 315
+ +W+N
Sbjct: 368 -----LPRTGAWMN 376
>gi|310823042|ref|YP_003955400.1| thiol:disulfide interchange protein dsbd [Stigmatella aurantiaca
DW4/3-1]
gi|309396114|gb|ADO73573.1| Thiol:disulfide interchange protein DsbD [Stigmatella aurantiaca
DW4/3-1]
Length = 461
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 10/180 (5%)
Query: 122 AVIFGAGLVTSLSPCTLSVLPLTLGYIGAF-GSGKSRAQIIGDSIAFSLGLATTLALLGV 180
A++F GL+T+++PC ++P+T+ GA G+ +A ++ S + +G+ ++LGV
Sbjct: 38 AIVFAGGLLTAMTPCVYPLIPITVSIFGARKAEGRGKALLLTSS--YIIGMGVVFSVLGV 95
Query: 181 GASFAGKAYGQIGTGLPLAASGLAI---VMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
A+ G+A+G + G P GLA+ + ++ EL+LPS + R +
Sbjct: 96 LAAKTGQAFGAL-LGHPGVVLGLAVFLVALATSMFGAFELELPS---SVQQRLSTVGGAG 151
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
A+L G A+PC+ PVL LL +VA + + +G LL Y G P L F
Sbjct: 152 VAGAFLMGSVSGFLAAPCTGPVLTGLLAFVAKTANTSLGAGLLFIYALGIGVPFFLIGVF 211
>gi|319405604|emb|CBI79227.1| cytochrome c-type biogenesis protein [Bartonella sp. AR 15-3]
Length = 262
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 102/225 (45%), Gaps = 16/225 (7%)
Query: 115 ALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGY-----IGAFGSGKS------RAQIIGD 163
A+ F++ +V F AG ++ LSPC L ++P L Y I F S K R ++
Sbjct: 2 AIEFSTFSVFF-AGALSFLSPCVLPLVPPYLCYMAGVSIDDFRSEKQDTGASVRLVLLSS 60
Query: 164 SIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFF 223
IAF LG T LLG AS GK G +A+ + I+ GLN L ++ L
Sbjct: 61 VIAFILGFTTVFVLLGASASTLGKFIGYYRDWFAIASGIIIIIFGLNFLGFFKIGLLLRE 120
Query: 224 DNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSY 283
F R A + AY+ GL FA +PC P+L ++ T + G LL Y
Sbjct: 121 VRFQTRKTPAG---PLGAYIIGLAFAFGWTPCIGPILGPIITLAGTKETVSEGAILLSVY 177
Query: 284 TTGYVAPLLLAASFAGALQSLL-SFRKFSSWINPMSGALLLGGGL 327
G P LLAA F+ + L +FR S + + G L+ G+
Sbjct: 178 ALGLGVPFLLAALFSSSFMEFLGAFRVHLSKVEKIIGIFLIITGI 222
>gi|451940760|ref|YP_007461398.1| cytochrome c-type biogenesis protein [Bartonella australis
Aust/NH1]
gi|451900147|gb|AGF74610.1| cytochrome c-type biogenesis protein [Bartonella australis
Aust/NH1]
Length = 261
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 100/224 (44%), Gaps = 18/224 (8%)
Query: 117 SFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAF-----------GSGKSRAQIIGDSI 165
F++ +V F AG ++ LSPC L ++P L Y+ GS R ++ +
Sbjct: 3 EFSTFSVFF-AGALSFLSPCVLPLVPPYLCYMAGVTIDDFRLAKQNGSTSVRLALLSSVV 61
Query: 166 AFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDN 225
AF G T LG AS GK G L +AA + I+ GLN L + ++ F
Sbjct: 62 AFIFGFTTVFIALGASASTIGKFVGYYRDWLAIAAGIIIIIFGLNFLGVFKIG----FLF 117
Query: 226 FDPRAAAANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYT 284
+ R PS + AY+ GL FA +PC P+L ++ T + G LL Y
Sbjct: 118 REARFQTRKMPSGPLGAYVIGLAFAFGWTPCIGPILGPIITLAGTKETAGEGAVLLGIYA 177
Query: 285 TGYVAPLLLAASFAGALQSLL-SFRKFSSWINPMSGALLLGGGL 327
G P +LAA F+G+ L +FR I + G L+ G+
Sbjct: 178 LGLGVPFMLAALFSGSFTRFLGAFRVHLGKIEKIIGIFLIATGI 221
>gi|304391764|ref|ZP_07373706.1| cytochrome c-type biogenesis protein CcdA [Ahrensia sp. R2A130]
gi|303295993|gb|EFL90351.1| cytochrome c-type biogenesis protein CcdA [Ahrensia sp. R2A130]
Length = 248
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 91/207 (43%), Gaps = 10/207 (4%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYI---------GAFGSGKSRAQIIGDSIAFSLGLATTLAL 177
AGL++ LSPC L ++P L Y+ G S R + +G++ F LG
Sbjct: 13 AGLLSFLSPCVLPLVPPYLTYLAGSSLDELTGEQDSRTIRNRALGNAAFFVLGFTCVFVA 72
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
LG GAS + Q L A + I MGL+ L + L +
Sbjct: 73 LGAGASTFSQVIRQNQDVLSTIAGVVIIAMGLHFLGVFRFALMYREARVQVSPELTRSAT 132
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
+ A++ GL FA +PC P+L +LG +TS G +L Y+ G P +LAA F
Sbjct: 133 AAGAFVMGLAFAFGWTPCIGPILGVILGMASTSDTVGEGAFMLGVYSLGLGIPFMLAALF 192
Query: 298 AGA-LQSLLSFRKFSSWINPMSGALLL 323
AG L+ L FR+ + G LL+
Sbjct: 193 AGPFLRFLQRFRRHLGLVEKAMGLLLV 219
>gi|114768947|ref|ZP_01446573.1| putative cytochrome c-type biogenesis protein CcdA [Rhodobacterales
bacterium HTCC2255]
gi|114549864|gb|EAU52745.1| putative cytochrome c-type biogenesis protein CcdA [Rhodobacterales
bacterium HTCC2255]
Length = 250
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 12/216 (5%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAF------GSGKSRAQIIGDSIAFSLGLAT 173
S+ + AG+ + LSPC L ++P L Y+G + R + ++ F+LGL+T
Sbjct: 14 SMVIALIAGIFSFLSPCVLPIVPPYLAYMGGISMQEMENNKDMRRHTVICALFFTLGLST 73
Query: 174 TLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAA 233
LLG+ S G+ Q A + I GL+ + + L++P + D R A
Sbjct: 74 VFILLGIAVSALGQFMLQNQDWFSRVAGAVIIFFGLHFIGV--LKIPFLYS--DLRVDAG 129
Query: 234 NFP-SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
+ ++ AY+ GL FA +PC P+L T+L A L+ Y G P +
Sbjct: 130 DRGGNAFGAYILGLAFAFGWTPCIGPILGTILSLAAQEASFARSSILMALYAVGLGVPFI 189
Query: 293 LAASFAG-ALQSLLSFRKFSSWINPMSGALLLGGGL 327
LAA F A++ + F++ + G LL+ G+
Sbjct: 190 LAAVFINKAIRIMTRFKRHMRKVEISMGVLLVVIGI 225
>gi|340029980|ref|ZP_08666043.1| cytochrome c biogenesis protein, transmembrane region [Paracoccus
sp. TRP]
Length = 247
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 88/176 (50%), Gaps = 10/176 (5%)
Query: 127 AGLVTSLSPCTLSVLPLTLGY-----IGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVG 181
AG+++ LSPC L ++P L Y +G SG+ A + ++ F LGL+T L+G+
Sbjct: 21 AGILSFLSPCVLPIVPPYLAYMTGVGVGGLKSGERSAVV--PALFFVLGLSTVFLLMGMA 78
Query: 182 ASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQA 241
AS G+ + Q L A + I++GL+ L + L++P F D A S++ A
Sbjct: 79 ASAFGRMFLQWQDLLARGAGVVVILLGLHFLHV--LRIP-FLDTEARIDAKEQGGSALGA 135
Query: 242 YLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
Y+ GL FA +PC P L +L AT G LL Y G P LL+A F
Sbjct: 136 YVLGLAFAFGWTPCIGPQLGMILSLAATGGAMGKGTALLAIYALGLGIPFLLSAIF 191
>gi|387769572|ref|ZP_10125835.1| cytochrome C biogenesis protein transmembrane region [Pasteurella
bettyae CCUG 2042]
gi|386906881|gb|EIJ71606.1| cytochrome C biogenesis protein transmembrane region [Pasteurella
bettyae CCUG 2042]
Length = 216
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 28/221 (12%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGAS 183
+F AGL + LSPC ++P+ Y G G + ++ F +GL+ T LG
Sbjct: 11 VFLAGLASFLSPCIFPIIPI---YFGILSKGGKKVL---NTFLFIMGLSLTFVSLGFSFG 64
Query: 184 FAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP-----SS 238
F G T + A + I++G++ L +I++ NF + SS
Sbjct: 65 FLGDLLLNDVT--RIIAGVIVIILGIHQLGLIKI-------NFLEKTKLVEIKTNGKSSS 115
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFA 298
+A++ GLTF+L +PC P+LA++L L GG ++ Y G P ++ + F+
Sbjct: 116 FEAFVLGLTFSLGWTPCIGPILASVLALSGDEGSALYGGAMMFVYVLGLSLPFIIFSFFS 175
Query: 299 GAL--------QSLLSFRKFSSWINPMSGALLLGGGLYTFL 331
L + L F+ F + + G LL+ L+ F+
Sbjct: 176 DELLKRVKLLNKHLNKFKIFGGLLIILMGVLLITNNLHIFM 216
>gi|416212695|ref|ZP_11621986.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis M01-240013]
gi|325144790|gb|EGC67081.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis M01-240013]
Length = 608
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 198 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 255
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 256 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 314
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 315 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 371
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + + W+N + G +LL +Y
Sbjct: 372 IAIGTFGGHI-----LPRAGDWMNAVKYAFGFILLAVAVY 406
>gi|20807504|ref|NP_622675.1| cytochrome c biogenesis protein [Thermoanaerobacter tengcongensis
MB4]
gi|254479570|ref|ZP_05092884.1| Cytochrome C biogenesis protein transmembrane region
[Carboxydibrachium pacificum DSM 12653]
gi|20516034|gb|AAM24279.1| Cytochrome c biogenesis protein [Thermoanaerobacter tengcongensis
MB4]
gi|214034492|gb|EEB75252.1| Cytochrome C biogenesis protein transmembrane region
[Carboxydibrachium pacificum DSM 12653]
Length = 218
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 10/216 (4%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASF 184
F AG+V+ LSPC L ++P + YI FG+ K+ I + I F LG + L+G AS
Sbjct: 7 FAAGIVSFLSPCVLPLIPAYVSYI--FGNRKNN---IVNLILFVLGFSLIFVLMGATASQ 61
Query: 185 AGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS-SVQAYL 243
GK + + + ++ GL + + P F + N + + +++
Sbjct: 62 LGKLFLSYKDAFRKISGIIIVIFGLQMTGLFR---PLFLNKEVKLINMENIQTGYIGSFI 118
Query: 244 AGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQS 303
G+TFA +PC P+LA++L Y ++ +G LL +Y+ G P ++ A ++
Sbjct: 119 LGVTFAAGWTPCVGPILASILLYASSVSTLSVGVILLFAYSMGLGIPFIVTALLIDKFKT 178
Query: 304 LL-SFRKFSSWINPMSGALLLGGGLYTFLDRLFPTT 338
+ K +I SG +L+ G+ + + L T
Sbjct: 179 MYKKINKILPYIEVASGVILIIFGILLYFNMLIKIT 214
>gi|160878894|ref|YP_001557862.1| cytochrome c biogenesis protein transmembrane region [Clostridium
phytofermentans ISDg]
gi|160427560|gb|ABX41123.1| cytochrome c biogenesis protein transmembrane region [Clostridium
phytofermentans ISDg]
Length = 222
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 3/188 (1%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASF 184
F G++T +SPC L +LPL L YI +++ + +++ F G +TT L+G A
Sbjct: 7 FLEGIITFISPCLLPMLPLYLTYIAGQPDTRTKYGTLKNALLFISGFSTTFVLMGAFAGT 66
Query: 185 AGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLA 244
G+ + + + + I++GL+ L I+++ + F+ + + S+ A+L
Sbjct: 67 LGRFIIRYHMAVNIISGIFLILLGLSFLGIVKIPI---FNGMNSQKLTRTKNQSIAAFLF 123
Query: 245 GLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSL 304
G+ F++ +PC L + L A + + G +LL Y G P LL+A L+S
Sbjct: 124 GIIFSVGWTPCVGAFLGSALVMAARTGSTMKGIVMLLMYALGLGLPFLLSALLIDQLKST 183
Query: 305 LSFRKFSS 312
F K +S
Sbjct: 184 FDFLKRNS 191
>gi|418290959|ref|ZP_12903040.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis NM220]
gi|372200718|gb|EHP14751.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis NM220]
Length = 608
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 198 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 255
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 256 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 314
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 315 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 371
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + + W+N + G +LL +Y
Sbjct: 372 IAIGTFGGHI-----LPRAGDWMNAVKYAFGFILLAVAVY 406
>gi|292493528|ref|YP_003528967.1| cytochrome C biogenesis protein transmembrane region [Nitrosococcus
halophilus Nc4]
gi|291582123|gb|ADE16580.1| cytochrome c biogenesis protein transmembrane region [Nitrosococcus
halophilus Nc4]
Length = 627
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 109/231 (47%), Gaps = 12/231 (5%)
Query: 117 SFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLA 176
S+ +LA FG GL+ + +PC ++P+ G I G + + S+ + L +A T
Sbjct: 197 SWLTLAAFFGFGLLLAFTPCVFPMIPILSGIIVGQGKNITTQRSFMLSLMYVLAMALTYT 256
Query: 177 LLGVGASFAGKAYGQI--GTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
+ G+ A G+ G+ + AS + +++ L++ ++ QLP+ N +
Sbjct: 257 VAGIVAGLVGENLQATFQHPGILVGASLVFVLLALSMFDLYHFQLPTRLQNRLFHISQNQ 316
Query: 235 FPSSV-QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
++ A L GL AL PC P LA L Y+ S D L+GG+ L + + G PLL+
Sbjct: 317 KGGTLLGAGLMGLFSALIVGPCVAPPLAGALIYIGESGDALLGGSALFALSMGMGTPLLV 376
Query: 294 AASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLYTFLDRLFPTTMAM 341
+ AG L + W+ P+ G LLL ++ L R+ P ++ M
Sbjct: 377 FGTSAGKL-----LPRAGGWMQPVKYLFGVLLLAVAIW-LLSRILPHSVIM 421
>gi|375007851|ref|YP_004981484.1| cytochrome c-type biogenesis protein CcdA [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|359286700|gb|AEV18384.1| Cytochrome c-type biogenesis protein CcdA [Geobacillus
thermoleovorans CCB_US3_UF5]
Length = 287
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 17/218 (7%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFG-------SGKSRAQIIGDSIAFSLGLATTLAL 177
FGAGL++ +SPC L + P L YI +G + + I + F LG +
Sbjct: 62 FGAGLLSFISPCCLPLYPAFLSYITGVSVDEIKKENGMLQKRAILHTFFFLLGFSVIFIA 121
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
+G G S GK + + ++ + GL +L + PSF D R N PS
Sbjct: 122 IGFGTSVIGKLFVDYQDLIRQISALFIVFFGLVILGVFS---PSFMMK-DKRLVFRNKPS 177
Query: 238 S-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
+ L G+ FA +PC+ P+L +++ AT P + +Y G+ P + +
Sbjct: 178 GYFGSILIGIGFAAGWTPCTGPILVSVIALAATK--PSAAMLYMFAYVLGFAVPFFIMSF 235
Query: 297 FAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
F G L + +K+++ I + G L++ G+ F D +
Sbjct: 236 FIGKLNWI---KKYNTVIVRVGGILMVIMGIMLFFDWM 270
>gi|91978719|ref|YP_571378.1| cytochrome c biogenesis protein, transmembrane region
[Rhodopseudomonas palustris BisB5]
gi|91685175|gb|ABE41477.1| cytochrome c biogenesis protein, transmembrane region
[Rhodopseudomonas palustris BisB5]
Length = 247
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 105/217 (48%), Gaps = 16/217 (7%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAF-------GSGK-SRA---QIIGDSIAFSLGLAT 173
FGAG+++ LSPC L ++P L ++ GS + +RA +++G S AF LG +T
Sbjct: 11 FGAGVLSFLSPCVLPLVPPYLCFLAGISLDQLVRGSDQPTRAINWRVVGASAAFVLGFST 70
Query: 174 TLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAA 233
LG AS G+ L + A + I++GL+ L + + L F +
Sbjct: 71 VFVALGASASALGQVITDHFDTLGIVAGIVIIILGLHFLGVFRIGLLFREARFQNVSRGV 130
Query: 234 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
F AY+ GL FA +PC PVLAT+L G LL +Y+ G P LL
Sbjct: 131 GF---FGAYVVGLAFAFGWTPCVGPVLATILLVAGVEGSATRGALLLGAYSLGIGLPFLL 187
Query: 294 AASFAGALQSLLS-FRKFSSWINPMSG-ALLLGGGLY 328
AA F+GA L++ R I + G AL+L G L+
Sbjct: 188 AALFSGAFIRLMARMRAHMETIEKVMGSALVLTGVLF 224
>gi|255526546|ref|ZP_05393455.1| cytochrome c biogenesis protein transmembrane region [Clostridium
carboxidivorans P7]
gi|296187652|ref|ZP_06856046.1| thioredoxin [Clostridium carboxidivorans P7]
gi|255509796|gb|EET86127.1| cytochrome c biogenesis protein transmembrane region [Clostridium
carboxidivorans P7]
gi|296047609|gb|EFG87049.1| thioredoxin [Clostridium carboxidivorans P7]
Length = 404
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 22/222 (9%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGY-----IGAFGSGKSR---AQIIGDSIAFSLGL 171
+L ++F G+++ SPC L VLP+ L + + G+ + + ++ ++I F LG+
Sbjct: 5 NLFLVFAEGVLSLFSPCILPVLPVYLSILSNSSVESLKHGEFKFINSSLLKNTILFVLGI 64
Query: 172 ATTLALLGVGAS-----FAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNF 226
+TT +LG S F I G L MG + +P F
Sbjct: 65 STTFFILGSSVSVLNQFFTSNKKIIILIGGILIIIMGIFYMGY-------INIP-FLQKE 116
Query: 227 DPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTG 286
+ AY+ G TF+ +PC P+L+++L +TSK LIG L+L YT G
Sbjct: 117 KKIHIEIKEMKPITAYILGFTFSFGWTPCVGPMLSSVLIMASTSKSVLIGNLLILIYTIG 176
Query: 287 YVAPLLLAASFAGALQSLLSFRKFS-SWINPMSGALLLGGGL 327
++ P ++ A F L + K I + G +L+ GL
Sbjct: 177 FILPFIIIAIFYNKLFKFIDKIKLHMGIIQKIGGVILIVSGL 218
>gi|418288708|ref|ZP_12901158.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis NM233]
gi|254670694|emb|CBA06830.1| thiol:disulfide interchange protein DsbD [Neisseria meningitidis
alpha153]
gi|372201320|gb|EHP15262.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis NM233]
Length = 613
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 203 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 260
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 261 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 319
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 320 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 376
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + + W+N + G +LL +Y
Sbjct: 377 IAIGTFGGHI-----LPRAGDWMNAVKYAFGFILLAVAVY 411
>gi|389605322|emb|CCA44242.1| thiol:disulfide interchange protein precursor [Neisseria
meningitidis alpha522]
Length = 613
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 203 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 260
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 261 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 319
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 320 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 376
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + + W+N + G +LL +Y
Sbjct: 377 IAIGTFGGHI-----LPRAGDWMNAVKYAFGFILLAVAVY 411
>gi|390934732|ref|YP_006392237.1| cytochrome c biogenesis protein transmembrane region
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|389570233|gb|AFK86638.1| cytochrome c biogenesis protein transmembrane region
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
Length = 220
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 101/214 (47%), Gaps = 24/214 (11%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
SL F G+V+ SPC L ++P+ + YI FG K + F LG + L+G
Sbjct: 2 SLFAAFLGGIVSFFSPCILPLIPVYVTYI--FGGKKKN---FFNLFLFVLGFSIVFVLMG 56
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVM-GLNLLEIIELQLPSFFDNFDPRAAAANFPSS 238
AS GK + L ASG+ I++ GL ++ II+ P+F R N PS
Sbjct: 57 ATASQLGKFFVSYKV-LFRKASGIIILLFGLYMMGIIK---PAFLS----REVKFNIPSK 108
Query: 239 VQAYLA----GLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
+ Y++ G+ FA +PC P+LAT+L Y IG LL +Y+ G P ++A
Sbjct: 109 KEGYISSFIFGIAFASGWTPCVGPILATILLYAGEQNTVSIGIFLLFAYSLGIGIPFIVA 168
Query: 295 ASFAGALQSLLSFRKFSSWINPMSGALLLGGGLY 328
A + +F K ++I P + GGL+
Sbjct: 169 AILIDKFK---AFYKKINFIMPYIEKI---GGLF 196
>gi|403234697|ref|ZP_10913283.1| cytochrome C biogenesis protein transmembrane region [Bacillus sp.
10403023]
Length = 235
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 103/222 (46%), Gaps = 25/222 (11%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-----------SIAFSLGLAT 173
FGAG ++ +SPC L + P L YI +G S +++ D +I F +G +
Sbjct: 10 FGAGFLSFISPCCLPLYPAFLSYI----TGASVSELKSDNAMLQKRSILHTIFFLVGFSI 65
Query: 174 TLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAA 233
+LG G SF G+ + + + L I GL +L II+ P F D +
Sbjct: 66 IFVMLGFGTSFVGQIFSDYKDLIRQIGAILIIFFGLVVLGIIK---PGFLMK-DRKIEFK 121
Query: 234 NFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
+ P+ V + G+ FA +PC P+L +++ T+ D + ++ Y+ G+ P L
Sbjct: 122 HRPAGYVGSIFIGMAFAAGWTPCMGPILMSVIALAGTNPDSAM--LYMVMYSLGFSIPFL 179
Query: 293 LAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
+ + F G LQ + RK S I + G ++ G+ + D +
Sbjct: 180 ILSFFIGRLQWI---RKNSIKIVKIGGYAMIIMGIILYFDWM 218
>gi|146276770|ref|YP_001166929.1| cytochrome c biogenesis protein, transmembrane region [Rhodobacter
sphaeroides ATCC 17025]
gi|145555011|gb|ABP69624.1| cytochrome c biogenesis protein, transmembrane region [Rhodobacter
sphaeroides ATCC 17025]
Length = 248
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 86/188 (45%), Gaps = 9/188 (4%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGA-----FGSGKSRAQIIGDSIAFSLGLATTLALLGVG 181
AG+++ LSPC L ++P L Y+G G SR I+ ++ F +GL+T LG
Sbjct: 21 AGVLSFLSPCVLPIVPPYLAYMGGISMKDLNEGASRGPILA-ALFFVMGLSTVFLFLGFT 79
Query: 182 ASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQA 241
AS G + Q A + + G + L I + SF D A S+ A
Sbjct: 80 ASAFGAFFLQNADSFATLAGIIVMAFGAHFLGIYRI---SFLDREMRMDAGDRGGSAFGA 136
Query: 242 YLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGAL 301
Y+ GL FA +PC P L +L A+ G TLL +Y G P LL A+F L
Sbjct: 137 YILGLAFAFGWTPCIGPQLGAILTLAASEASIARGTTLLATYAAGLGIPFLLVAAFFPRL 196
Query: 302 QSLLSFRK 309
L+++ K
Sbjct: 197 TGLMAWMK 204
>gi|126650806|ref|ZP_01723022.1| Cytochrome c-type biogenesis protein ccdA [Bacillus sp. B14905]
gi|126592471|gb|EAZ86489.1| Cytochrome c-type biogenesis protein ccdA [Bacillus sp. B14905]
Length = 236
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 25/227 (11%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-----------SIAFS 168
+L + FGAG + +SPCTL + P + YI +G S ++ GD ++ F
Sbjct: 6 NLLLAFGAGFLNFISPCTLPLYPAFISYI----TGMSLDELQGDNKKLRTMGMLHTLFFL 61
Query: 169 LGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
+G + LG +S G + Q L + L ++ GL ++ + P F +
Sbjct: 62 IGFSVIFIFLGYSSSVVGWFFFQYQDVLRQVGAILIVLFGLMIIGALS---PKFLMQ-EK 117
Query: 229 RAAAANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGY 287
R + N P+ + ++ GL FA +PC+ P+ + ++ S+ P +G +++Y G+
Sbjct: 118 RLSFKNRPTGYLGSFFIGLAFAAGWTPCTGPITGAV--FMMASQHPGVGMFYMVAYVLGF 175
Query: 288 VAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
P L + F L + RK+S I + G ++ G+ F D L
Sbjct: 176 AIPFFLLSQFVTKLAWI---RKYSQTITKVGGYFMIVLGIVLFFDGL 219
>gi|296127401|ref|YP_003634653.1| Protein-disulfide reductase [Brachyspira murdochii DSM 12563]
gi|296019217|gb|ADG72454.1| Protein-disulfide reductase [Brachyspira murdochii DSM 12563]
Length = 581
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS-RAQIIGDSIAFSLGLATTLA 176
F +L +IF AGL + L PCT +L +T+ +G K+ + + S+ F+LG+ TT
Sbjct: 178 FITLILIFAAGLASVLLPCTYPLLSITVSILGTTTDNKNNKKSSVLASLLFALGVITTYT 237
Query: 177 LLGVGASFAGKAY------GQIGTGLPLAASGLAIVM---GLNLLEIIELQLPSFFDNFD 227
LLG S AG A+ G IG P+ + L ++ ++ E++ PSF +
Sbjct: 238 LLGAVVSVAGFAFHKTILFGSIGYN-PIILTILVLLFLYFTFSMAGFYEIKAPSFLQSAK 296
Query: 228 PRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLL--GYVATSKDPLIGGTLLLSYTT 285
A + S Y+ GL + A+PC+ P++A +L G++ +P+ + Y
Sbjct: 297 TNAYSKKNQSLFHKYIMGLLAGIVATPCAAPIIAVILEIGFL----NPVFAALYMAVYAL 352
Query: 286 GYVAPLLLAASFAGALQSL 304
G+ + L + +FA L +
Sbjct: 353 GFASVLFVLGTFASILTKM 371
>gi|431792980|ref|YP_007219885.1| thiol:disulfide interchange protein [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430783206|gb|AGA68489.1| thiol:disulfide interchange protein [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 233
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 115/234 (49%), Gaps = 16/234 (6%)
Query: 103 QQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIG 162
Q E++ +S S+ + + AG++TS++PC L+ +PL +GY+G G + +
Sbjct: 6 NQWLESISAGISMNSWVAPLLALVAGVLTSITPCALTSVPLVIGYVGGTGQ-REPGKAFR 64
Query: 163 DSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSF 222
S F++G+A T +LG AS G+ G+ + L ++M L + E+
Sbjct: 65 LSATFAIGMAATFTVLGTIASLLGRLVQGTGSWWYIFLGVLMLLMTLQIWEV-------- 116
Query: 223 FDNFDPRAAAANFPSS---VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTL 279
NF P + A + + A+LAG+ +SPC+TPVL LL VA + G L
Sbjct: 117 -YNFIPSSYAISRNTKRGFAGAFLAGVLGGFFSSPCATPVLVVLLAVVAKEGSLIWGIFL 175
Query: 280 LLSYTTGYVAPLLLAASFAGALQSLLSFRKF---SSWINPMSGALLLGGGLYTF 330
L+SY+ G+ +L A + G +Q L S K+ S + G ++L G Y F
Sbjct: 176 LISYSLGHSFLVLFAGTSVGFVQKLTSNEKYGQISKLLRIFMGLVVLCIGFYMF 229
>gi|402487614|ref|ZP_10834432.1| cytochrome-c-type biogenesis protein [Rhizobium sp. CCGE 510]
gi|401813483|gb|EJT05827.1| cytochrome-c-type biogenesis protein [Rhizobium sp. CCGE 510]
Length = 249
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 101/215 (46%), Gaps = 18/215 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGA-----FGSGKS-------RAQIIGDSIAFSLGLATT 174
AG ++ LSPC L ++P L Y+ F G + R ++ ++ F+LG AT
Sbjct: 14 AGALSFLSPCVLPLVPPYLCYMAGISVEQFRGGGAVAVAPDIRRGVLFSALLFTLGFATV 73
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
LG GAS G A Q L + IVMGLN L + L L + + R
Sbjct: 74 FVALGAGASSIGMALRQHLDLLSKLGGLIIIVMGLNFLGLFRLGLLAR----EARFQGGG 129
Query: 235 FPSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
P+++ AY+ GL FA +PC PVL +LG A+ + G LL Y+ G P +
Sbjct: 130 KPATLTGAYVMGLAFAFGWTPCIGPVLGAILGVAASRETVGSGAGLLAVYSLGLAIPFWI 189
Query: 294 AASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
AA F+GA LS FR+ + + G L+ GL
Sbjct: 190 AAGFSGAFMRFLSRFRRHLGTVEKVMGVFLVLTGL 224
>gi|421538471|ref|ZP_15984647.1| disulfide interchange protein DsbD [Neisseria meningitidis 93003]
gi|421551127|ref|ZP_15997127.1| disulfide interchange protein DsbD [Neisseria meningitidis 69166]
gi|421561562|ref|ZP_16007403.1| disulfide interchange protein DsbD [Neisseria meningitidis NM2657]
gi|433471865|ref|ZP_20429248.1| disulfide interchange protein DsbD [Neisseria meningitidis 68094]
gi|433477971|ref|ZP_20435288.1| disulfide interchange protein DsbD [Neisseria meningitidis 70012]
gi|433526448|ref|ZP_20483077.1| disulfide interchange protein DsbD [Neisseria meningitidis 69096]
gi|433539289|ref|ZP_20495763.1| disulfide interchange protein DsbD [Neisseria meningitidis 70030]
gi|402316498|gb|EJU52043.1| disulfide interchange protein DsbD [Neisseria meningitidis 93003]
gi|402328661|gb|EJU64028.1| disulfide interchange protein DsbD [Neisseria meningitidis 69166]
gi|402337262|gb|EJU72511.1| disulfide interchange protein DsbD [Neisseria meningitidis NM2657]
gi|432207822|gb|ELK63810.1| disulfide interchange protein DsbD [Neisseria meningitidis 68094]
gi|432214376|gb|ELK70277.1| disulfide interchange protein DsbD [Neisseria meningitidis 70012]
gi|432260208|gb|ELL15468.1| disulfide interchange protein DsbD [Neisseria meningitidis 69096]
gi|432272781|gb|ELL27887.1| disulfide interchange protein DsbD [Neisseria meningitidis 70030]
Length = 601
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 191 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 248
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 249 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 307
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 308 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 364
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + + W+N + G +LL +Y
Sbjct: 365 IAIGTFGGHI-----LPRAGDWMNAVKYAFGFILLAVAVY 399
>gi|409437326|ref|ZP_11264445.1| putative cytochrome c-type biogenesis protein [Rhizobium
mesoamericanum STM3625]
gi|408751050|emb|CCM75601.1| putative cytochrome c-type biogenesis protein [Rhizobium
mesoamericanum STM3625]
Length = 249
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 102/215 (47%), Gaps = 18/215 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAF------GSG------KSRAQIIGDSIAFSLGLATT 174
AG ++ LSPC L ++P L Y+ G G R ++ ++ F+LG AT
Sbjct: 14 AGTLSFLSPCVLPLVPPYLCYMAGISVEQFRGGGAVAIASDGRRSVLFSALFFTLGFATV 73
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
LG GAS G A Q L + I+MGLN L + + + + + R +
Sbjct: 74 FVALGAGASSIGMALRQHLDLLAKIGGLIIIIMGLNFLGVFRIGILAR----EARFQGSG 129
Query: 235 FPSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
P+++ AY+ GL FA +PC PVL +LG A+ + G LL Y+ G P +
Sbjct: 130 KPATLTGAYIMGLAFAFGWTPCIGPVLGAILGVAASRETVGSGAGLLAVYSLGLAIPFWI 189
Query: 294 AASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
AA F+GA L+ FR+ + + GA L+ GL
Sbjct: 190 AAGFSGAFMRFLTRFRRHLGTVEKVMGAFLILSGL 224
>gi|384209540|ref|YP_005595260.1| thiol-disulfide interchange protein [Brachyspira intermedia PWS/A]
gi|343387190|gb|AEM22680.1| thiol-disulfide interchange protein [Brachyspira intermedia PWS/A]
Length = 578
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS-RAQIIGDSIAFSLGLATTLA 176
F +L +IF AGL + L PCT +L +T+ +G K+ + + S+ F+LG+ TT
Sbjct: 175 FITLILIFAAGLASVLLPCTYPLLSITVSILGTTTDEKNNKKSSVLASLLFALGVITTYT 234
Query: 177 LLGVGASFAGKAY------GQIGTGLPLAASGLAIVM---GLNLLEIIELQLPSFFDNFD 227
LLG S AG A+ G IG P+ + L ++ ++ E++ PSF +
Sbjct: 235 LLGAVVSVAGFAFHKTILFGSIGYN-PIVLTILVLLFLYFTFSMAGFYEIKAPSFLQSAK 293
Query: 228 PRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLL--GYVATSKDPLIGGTLLLSYTT 285
A + S Y+ GL + A+PC+ P++A +L G++ +P+ + Y
Sbjct: 294 TNAYSKKNQSIFHKYIMGLLAGIVATPCAAPIIAVILEIGFL----NPVFATLYMAVYAL 349
Query: 286 GYVAPLLLAASFAGALQSL 304
G+ + L + +FA L +
Sbjct: 350 GFASVLFILGTFASILTKM 368
>gi|91762096|ref|ZP_01264061.1| probable holocytochrome-c synthase ccdA [Candidatus Pelagibacter
ubique HTCC1002]
gi|91717898|gb|EAS84548.1| probable holocytochrome-c synthase ccdA [Candidatus Pelagibacter
ubique HTCC1002]
Length = 235
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 21/205 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDS-------IAFSLGLA 172
L + FGAGL++ LSPC VLPL GY+ +F +G + +I+ I FSLG +
Sbjct: 3 ELFIAFGAGLISFLSPC---VLPLIPGYV-SFITGSTLNEILEKKKIDLLPLIVFSLGFS 58
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
+ G ASF G+ Q L A + I+ L L+ ++ ++ F N + +
Sbjct: 59 FVFIVFGATASFLGQILLQNSQILRTIAGVIIIIFSLQLIGVLNIK----FLNVEKKFYT 114
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPL 291
+ ++ G+ F +PC P+L ++L +A++++ + LLLS Y+ G P
Sbjct: 115 KKSNNIFFVFIIGMAFGFGWTPCIGPILGSILA-LASTEETIYKAILLLSFYSLGLAIPF 173
Query: 292 LLAASFAGALQSLLSFRK-FSSWIN 315
+L+ +Q L F K F IN
Sbjct: 174 VLSGY---LMQKFLLFSKNFKRNIN 195
>gi|83952569|ref|ZP_00961300.1| sulfur oxidation V protein [Roseovarius nubinhibens ISM]
gi|83836242|gb|EAP75540.1| sulfur oxidation V protein [Roseovarius nubinhibens ISM]
Length = 249
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 128 GLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD--------------SIAFSLGLAT 173
GL+ SPC L ++P L Y+ +G S A+I D S+ FSLG+ T
Sbjct: 13 GLLVFFSPCVLPIVPFYLSYM----AGASMAEISADGRLAPGLRRRAVLASVMFSLGIIT 68
Query: 174 TLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAA 233
LLG A + + + T + A+ + +MGL+ L +I + + + A
Sbjct: 69 VFVLLGAAAYGLSQTFRGLQTEFRIFAAIVVALMGLHFLGVIRIGFLNRMVQLE--AGDT 126
Query: 234 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
+ S + AY+ GL FA +PC VL ++ +T + L G LL+++ G AP ++
Sbjct: 127 SNMSVLGAYVVGLAFAAGWTPCVGGVLTAVVFTASTEETALRGLILLITFGIGMTAPFVV 186
Query: 294 AASFAGA-LQSLLSFRKFSSWINPMSGALLL 323
AA F G L+ FR+ + G LLL
Sbjct: 187 AALFIGPFLRFAARFRRHLPKVEKAMGLLLL 217
>gi|313668097|ref|YP_004048381.1| disulfide isomerase [Neisseria lactamica 020-06]
gi|313005559|emb|CBN86995.1| putative disulphide isomerase [Neisseria lactamica 020-06]
Length = 613
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 203 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 260
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N + +
Sbjct: 261 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSKLS 319
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 320 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 376
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 377 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 411
>gi|222100403|ref|YP_002534971.1| Cytochrome C-type biogenesis protein [Thermotoga neapolitana DSM
4359]
gi|221572793|gb|ACM23605.1| Cytochrome C-type biogenesis protein [Thermotoga neapolitana DSM
4359]
Length = 216
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 20/188 (10%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFA 185
G G++ SPC L ++P G + F S +++G F LG+++ +L+GV
Sbjct: 15 GYGILAFFSPCVLPLIPAFFGVL--FSSKGDFFKLLG----FFLGISSLFSLMGV----- 63
Query: 186 GKAYGQIGTGLP----LAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQA 241
+G G +P SGLA+V+ LL + ++++ P +
Sbjct: 64 --LFGLFGNFVPSYVLTWVSGLALVV-FGLLYLFDVEVMK--VKKGPNVWKFRGGGFLNG 118
Query: 242 YLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGAL 301
+L G + L PCS+P+L ++L VA+ K+P+ GG LL Y+ G P +LA F L
Sbjct: 119 FLLGGSVGLVWIPCSSPILGSILAIVASGKEPVKGGVLLFLYSLGISIPFVLAGGFVNRL 178
Query: 302 QSLLSFRK 309
+ + FRK
Sbjct: 179 LNRIGFRK 186
>gi|119385691|ref|YP_916746.1| cytochrome c biogenesis protein, transmembrane region [Paracoccus
denitrificans PD1222]
gi|119376286|gb|ABL71050.1| cytochrome c biogenesis protein, transmembrane region [Paracoccus
denitrificans PD1222]
Length = 247
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 85/176 (48%), Gaps = 10/176 (5%)
Query: 127 AGLVTSLSPCTLSVLPLTLGY-----IGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVG 181
AG+++ LSPC L ++P L Y +G SG+ A + ++ F +GL+T L+G+
Sbjct: 21 AGILSFLSPCVLPIVPPYLAYMTGVGVGGLKSGERSAVV--PALFFVMGLSTVFLLMGMA 78
Query: 182 ASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQA 241
AS G+ + Q L A + I++GL+ L II + F D A S++ A
Sbjct: 79 ASAFGRMFLQWQDLLARGAGVVVILLGLHFLHIIRI---PFLDAEARIDAQERGGSALGA 135
Query: 242 YLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
Y GL FA +PC P L +L AT G LL Y G P LL+A F
Sbjct: 136 YALGLAFAFGWTPCIGPQLGMILSLAATGGAMGKGTALLAVYALGLGIPFLLSAIF 191
>gi|395781695|ref|ZP_10462113.1| hypothetical protein MCY_00510 [Bartonella rattimassiliensis 15908]
gi|395421128|gb|EJF87386.1| hypothetical protein MCY_00510 [Bartonella rattimassiliensis 15908]
Length = 261
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 87/198 (43%), Gaps = 17/198 (8%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ-----------IIGDSIAFSLGLA 172
+F AG ++ LSPC L ++P L Y+ R++ ++ IAF LG
Sbjct: 9 VFFAGGLSFLSPCVLPLVPPYLCYMAGISIDDFRSENRDEKVFIKWALLSSVIAFVLGFT 68
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
T LG AS GK G A+ + I+ GLN L + ++ F + R
Sbjct: 69 TVFVALGASASTIGKFIGYYRDWFAFASGIIIIIFGLNFLGLCKIT----FLFREVRFQT 124
Query: 233 ANFPS-SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
P+ + AY+ GL FA +PC P+L ++ T + G LL Y G P
Sbjct: 125 HKTPAGPLGAYIMGLAFAFGWTPCIGPILGPIITLAGTKETVGEGAVLLAVYALGLAIPF 184
Query: 292 LLAASFAGALQSLL-SFR 308
+LAA F+ + L +FR
Sbjct: 185 VLAALFSSSFMRFLGAFR 202
>gi|254474857|ref|ZP_05088243.1| cytochrome c biogenesis protein, transmembrane region [Ruegeria sp.
R11]
gi|214029100|gb|EEB69935.1| cytochrome c biogenesis protein, transmembrane region [Ruegeria sp.
R11]
Length = 250
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 94/208 (45%), Gaps = 10/208 (4%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAF------GSGKSRAQIIGDSIAFSLGLATTLALLGV 180
AGL++ LSPC L ++P L Y+ G+ +R + I ++ F +GL+T LLG
Sbjct: 21 AGLISFLSPCVLPIVPPYLAYMSGVSLGEIQGTAAARRKAIVAALFFVMGLSTVFLLLGF 80
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
AS G Q A + IV GL+ L + + + D A + S+V
Sbjct: 81 TASAFGAFVLQNQELFAQIAGVVVIVFGLHFLSVFRIPI---LDREARMDAGQSGGSAVG 137
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGA 300
AY+ GL FA +PC P L +L AT G LL Y G P LLAA F
Sbjct: 138 AYILGLAFAFGWTPCIGPQLGAILSIAATEASVTRGTVLLGVYALGLGVPFLLAAMFLNR 197
Query: 301 LQSLLS-FRKFSSWINPMSGALLLGGGL 327
+++ + + I GALL+ GL
Sbjct: 198 SMVVMNRIKPYMGIIEKAMGALLIFVGL 225
>gi|319407169|emb|CBI80808.1| cytochrome c-type biogenesis protein [Bartonella sp. 1-1C]
Length = 262
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 102/225 (45%), Gaps = 16/225 (7%)
Query: 115 ALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGY-----IGAFGSGKS------RAQIIGD 163
+ F++L+V F AG ++ LSPC L ++P L Y I F S K R ++
Sbjct: 2 VIEFSTLSVFF-AGALSFLSPCVLPLVPPYLCYMAGVSIDDFRSKKQDRRASVRLVLLSS 60
Query: 164 SIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFF 223
IAF G T LLG AS GK G +A+ + I+ GLN L + ++ L
Sbjct: 61 VIAFVFGFTTVFVLLGASASTLGKFIGYYRDWFAIASGIIIIIFGLNFLGLFKIGLLLRE 120
Query: 224 DNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSY 283
F R A + AY+ GL FA +PC P+L ++ T + G LL Y
Sbjct: 121 VRFQTRKTPAG---PLGAYIIGLAFAFGWTPCIGPILGPIITLAGTKETVGEGAMLLGVY 177
Query: 284 TTGYVAPLLLAASFAGALQSLL-SFRKFSSWINPMSGALLLGGGL 327
G P LLAA F+G+ L +FR + + G L+ G+
Sbjct: 178 ALGLGVPFLLAALFSGSFMGFLGAFRVHLGKVEKIIGIFLIITGI 222
>gi|338706080|ref|YP_004672848.1| DsbD family disulfide bond dehydrogenase D [Treponema
paraluiscuniculi Cuniculi A]
gi|378972604|ref|YP_005221208.1| DsbD family disulfide bond dehydrogenase D [Treponema pallidum
subsp. pertenue str. SamoaD]
gi|378973670|ref|YP_005222276.1| DsbD family disulfide bond dehydrogenase D [Treponema pallidum
subsp. pertenue str. Gauthier]
gi|378981579|ref|YP_005229884.1| DsbD family disulfide bond dehydrogenase D [Treponema pallidum
subsp. pertenue str. CDC2]
gi|335344141|gb|AEH40057.1| DsbD family disulfide bond dehydrogenase D [Treponema
paraluiscuniculi Cuniculi A]
gi|374676927|gb|AEZ57220.1| DsbD family disulfide bond dehydrogenase D [Treponema pallidum
subsp. pertenue str. SamoaD]
gi|374677996|gb|AEZ58288.1| DsbD family disulfide bond dehydrogenase D [Treponema pallidum
subsp. pertenue str. CDC2]
gi|374679065|gb|AEZ59356.1| DsbD family disulfide bond dehydrogenase D [Treponema pallidum
subsp. pertenue str. Gauthier]
Length = 264
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 22/197 (11%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYI-----GAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
F AGL++ LSPC L ++P + +I G+ +G +R Q+ S+ F LGL T L
Sbjct: 11 FLAGLLSFLSPCVLPLIPAYVSFISGESLGSIRAGAARLQVFLSSVFFVLGLTTVFVLFS 70
Query: 180 VGASFAGKAYGQIGTGLPLAASG-LAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSS 238
+ F+G G+ LA +G L ++ + + +I L L + FD ++
Sbjct: 71 I--VFSG--------GVQLAGAGVLTVLTRVAGVGVILLGLNTIFDVVPFLRVERRMHTT 120
Query: 239 VQ------AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
V+ AYL GL FA +PC P+L++LL Y A+S L LL Y G P +
Sbjct: 121 VRRVGVFRAYLFGLLFATGWTPCVGPILSSLLFYAASSGQLLHAAGLLTVYALGLGLPFV 180
Query: 293 LAASFAGALQSLLSFRK 309
A F G + + ++ K
Sbjct: 181 FAGIFFGRAERVFAWVK 197
>gi|260427014|ref|ZP_05780993.1| cytochrome c biogenesis protein CcdA [Citreicella sp. SE45]
gi|260421506|gb|EEX14757.1| cytochrome c biogenesis protein CcdA [Citreicella sp. SE45]
Length = 250
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 93/208 (44%), Gaps = 10/208 (4%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAF------GSGKSRAQIIGDSIAFSLGLATTLALLGV 180
AG+++ LSPC L ++P L ++ G++R + ++ F LGL+T LLG
Sbjct: 21 AGVISFLSPCVLPIVPPYLAFMSGVSLAEMEAGGRARLRAFTAALFFVLGLSTVFVLLGF 80
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
AS+ G + Q L + + IV GL+ L + + F D S+
Sbjct: 81 TASWLGTFFLQNQLLLARISGVVVIVFGLHFLHVFRI---PFLDREARIETGDTGGSAFG 137
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGA 300
AY+ GL FA +PC P L +L A+ G LL Y G P LLAA F
Sbjct: 138 AYILGLAFAFGWTPCIGPQLGAILSMAASEASIARGTALLAVYAAGLGLPFLLAAIFLSR 197
Query: 301 LQSLLS-FRKFSSWINPMSGALLLGGGL 327
L++ ++ I + G LL+ GL
Sbjct: 198 AMGLMNRIKRHMGLIEKVMGLLLVAVGL 225
>gi|340358124|ref|ZP_08680719.1| stage V sporulation cytochrome c-type biogenesis protein
[Sporosarcina newyorkensis 2681]
gi|339615238|gb|EGQ19920.1| stage V sporulation cytochrome c-type biogenesis protein
[Sporosarcina newyorkensis 2681]
Length = 236
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 17/223 (7%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAF-------GSGKSRAQIIGDSIAFSLGLA 172
+L + FGAGL+ +SPCTL + P + YI G+SR I +I F +G +
Sbjct: 6 NLFLAFGAGLLNFISPCTLPLYPAFISYITGMSLDEMNTDKGESRKSGILHTIVFLVGFS 65
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
LG +S G + Q L + ++ GL +L P F + +
Sbjct: 66 VIFIFLGYSSSLVGTFFYQYQDLLRQIGAIFIVIFGLMILGFFT---PKFLMK-EKKLQF 121
Query: 233 ANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
N P+ +L GL FA +PC+ P+ + ++ +++P G +L Y G+ P
Sbjct: 122 KNRPAGYFGTFLIGLAFAAGWTPCTGPITGAV--FMMAAQNPGSGMWYMLVYVLGFAIPF 179
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
L + F ++ + +K++ I + G L++ G+ F D L
Sbjct: 180 FLLSIFITRVKWI---QKYNRTITKVGGYLMIALGILLFFDGL 219
>gi|261364978|ref|ZP_05977861.1| thiol:disulfide interchange protein DsbD [Neisseria mucosa ATCC
25996]
gi|288566778|gb|EFC88338.1| thiol:disulfide interchange protein DsbD [Neisseria mucosa ATCC
25996]
Length = 600
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 97/204 (47%), Gaps = 19/204 (9%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK RA + S+ + GLA T L+
Sbjct: 189 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKNAGKKRAFAL--SMVYVQGLALTYTLV 246
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
GV A G + Q + LAA+GL +V+ L++ + +QLP S+F N + +
Sbjct: 247 GVIAGLTGALLTVWLQ-QAWVVLAAAGLMVVLALSMFGLFNIQLPNAVQSYFQNQSSKLS 305
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
S ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 306 GGKIAS---VFVMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 362
Query: 292 LLAASFAGALQSLLSFRKFSSWIN 315
+L +F G + K W+N
Sbjct: 363 ILIGTFGGHV-----LPKAGDWMN 381
>gi|15639095|ref|NP_218541.1| cytochrome c biogenesis protein (ccdA) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189025335|ref|YP_001933107.1| cytochrome c biogenesis protein [Treponema pallidum subsp. pallidum
SS14]
gi|378974733|ref|YP_005223341.1| DsbD family disulfide bond dehydrogenase D [Treponema pallidum
subsp. pallidum DAL-1]
gi|384421653|ref|YP_005631012.1| cytochrome c biogenesis protein [Treponema pallidum subsp. pallidum
str. Chicago]
gi|408502004|ref|YP_006869448.1| DsbD family disulfide bond dehydrogenase D [Treponema pallidum
subsp. pallidum str. Mexico A]
gi|3322362|gb|AAC65096.1| cytochrome c biogenesis protein (ccdA) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189017910|gb|ACD70528.1| cytochrome c biogenesis protein [Treponema pallidum subsp. pallidum
SS14]
gi|291059519|gb|ADD72254.1| cytochrome c biogenesis protein [Treponema pallidum subsp. pallidum
str. Chicago]
gi|374680131|gb|AEZ60421.1| DsbD family disulfide bond dehydrogenase D [Treponema pallidum
subsp. pallidum DAL-1]
gi|408475367|gb|AFU66132.1| DsbD family disulfide bond dehydrogenase D [Treponema pallidum
subsp. pallidum str. Mexico A]
Length = 264
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 22/197 (11%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYI-----GAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
F AGL++ LSPC L ++P + +I G+ +G +R Q+ S+ F LGL T L
Sbjct: 11 FLAGLLSFLSPCVLPLIPAYVSFISGESLGSIRAGAARLQVFLSSVFFVLGLTTVFVLFS 70
Query: 180 VGASFAGKAYGQIGTGLPLAASG-LAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSS 238
+ F+G G+ LA +G L ++ + + +I L L + FD ++
Sbjct: 71 I--VFSG--------GVQLAGAGVLTVLTRVAGVGVILLGLNTIFDVVPFLRVERRMHTT 120
Query: 239 VQ------AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
V+ AYL GL FA +PC P+L++LL Y A+S L LL Y G P +
Sbjct: 121 VRRVGVFRAYLFGLLFATGWTPCVGPILSSLLFYAASSGQLLHAAGLLTVYALGLGLPFV 180
Query: 293 LAASFAGALQSLLSFRK 309
A F G + + ++ K
Sbjct: 181 FAGIFFGRAERVFAWVK 197
>gi|288555605|ref|YP_003427540.1| cytochrome c-type biogenesis protein CcdA [Bacillus pseudofirmus
OF4]
gi|288546765|gb|ADC50648.1| cytochrome c-type biogenesis protein CcdA [Bacillus pseudofirmus
OF4]
Length = 247
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 28/227 (12%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFG---------SGKSRAQIIGDSIAFSLGLATTL 175
F AG ++ +SPCTL + P+ L YI S K R Q++ S F LG+++
Sbjct: 12 FLAGFISFISPCTLPLFPVYLSYITGISVKELQTNHKSQKVRKQLMIHSFFFLLGVSSIF 71
Query: 176 ALLGVGASFAGKA-----YGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNF--DP 228
LG GA+F G+ G+ G + A +VMGL + II+ FD D
Sbjct: 72 FALGFGATFFGQWLEDMIIGRNGNLIQQLAGIFIVVMGLFVSGIIQ------FDWLMKDR 125
Query: 229 RAAAANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGY 287
R P+ V AG+ FA +PC P+ A++L A+ +P G L Y G+
Sbjct: 126 RFNVGKKPAGFVGTTFAGMGFAAGWTPCIGPIFASILMLAAS--NPQEGLLYTLFYILGF 183
Query: 288 VAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
P + F G+ + ++ K+S I + GA+++ G+ F ++
Sbjct: 184 TLPFFVLTFFIGSTRFIV---KYSQPIMKIGGAIMILMGILLFTGKM 227
>gi|429124294|ref|ZP_19184826.1| Protein-disulfide reductase [Brachyspira hampsonii 30446]
gi|426280024|gb|EKV57043.1| Protein-disulfide reductase [Brachyspira hampsonii 30446]
Length = 582
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS-RAQIIGDSIAFSLGLATTLA 176
F +L +IF AGL + L PCT +L +T+ +G K+ + + S+ F+LG+ TT
Sbjct: 179 FITLILIFAAGLASVLLPCTYPLLSITVSILGTTTDDKNNKKSSVLASLLFALGVITTYT 238
Query: 177 LLGVGASFAGKAY------GQIGTGLPLAASGLAIVM---GLNLLEIIELQLPSFFDNFD 227
LLG S AG A+ G IG P+ + L ++ ++ E++ PSF +
Sbjct: 239 LLGAVVSVAGFAFHKTILFGSIGYN-PIVLTILVLLFLYFTFSMAGFYEIKAPSFLQSAK 297
Query: 228 PRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLL--GYVATSKDPLIGGTLLLSYTT 285
A + S Y+ GL + A+PC+ P++A +L G++ +P+ + Y
Sbjct: 298 TNAYSKKNQSLFHKYIMGLLAGIVATPCAAPIIAVILEIGFL----NPVFATLYMAVYAL 353
Query: 286 GYVAPLLLAASFAGALQSL 304
G+ + L + +FA L +
Sbjct: 354 GFASVLFVLGTFASILTKM 372
>gi|306841768|ref|ZP_07474454.1| cytochrome c biogenesis protein transmembrane region [Brucella sp.
BO2]
gi|306288173|gb|EFM59560.1| cytochrome c biogenesis protein transmembrane region [Brucella sp.
BO2]
Length = 253
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 100/226 (44%), Gaps = 24/226 (10%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRA------------QIIG-DSIAFSLGLA 172
GAG ++ LSPC L ++P L Y+ RA + +G ++ F LG
Sbjct: 16 GAGALSFLSPCVLPLVPPYLCYMAGVSVEDFRADASKATAKPSARRSLGFAALCFVLGFT 75
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
T LG GAS G + + A + I+MGLN L + L S F R A
Sbjct: 76 TVFVALGAGASSIGAFLRTWQQQIAIVAGIVIILMGLNFLGFLRLSFLSREARFQARNAP 135
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
A S + AY+ GL FA +PC PVL +L S G LL +Y+ G P L
Sbjct: 136 A---SPLGAYIMGLAFAFGWTPCIGPVLGPILTLAGGSSTVGEGALLLATYSLGLGIPFL 192
Query: 293 LAASFAGALQSLLS-FRKFSSWINP-------MSGALLLGGGLYTF 330
+AA F+GA LS FR + ++G L L GG+ +F
Sbjct: 193 IAALFSGAFMRFLSRFRVHLGKVEKAMGVLLIIAGVLFLTGGMQSF 238
>gi|365153384|ref|ZP_09349824.1| hypothetical protein HMPREF1019_00507 [Campylobacter sp. 10_1_50]
gi|363651912|gb|EHL90964.1| hypothetical protein HMPREF1019_00507 [Campylobacter sp. 10_1_50]
Length = 575
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 101/201 (50%), Gaps = 8/201 (3%)
Query: 106 NEAVLGQLSALSF-TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDS 164
++++ +LS+ +F SLA FG GL+ SL+PC ++P+ I + G + + S
Sbjct: 159 DQSIANELSSKNFFISLATFFGYGLLLSLTPCVFPMIPILSSIIVSKGGSLNAKKGFLLS 218
Query: 165 IAFSLGLATTLALLGVGASFAGKAYGQIGTGLPL----AASGLAIVMGLNLLEIIELQLP 220
+ + + ++ AL GVGAS G +G G + A + + +++ ++ +++LP
Sbjct: 219 LVYVVAMSLAYALAGVGASLLG--FGIAGALQNIYVLGAFAAIFVILSFSMFGFYDIKLP 276
Query: 221 SFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLL 280
S F+N + + N + ++ G AL SPC LA L Y+A S D + GG +L
Sbjct: 277 SKFENLINK-KSQNSSGLIGVFIMGFASALIVSPCVAAPLAGALLYIAQSGDAIYGGIML 335
Query: 281 LSYTTGYVAPLLLAASFAGAL 301
G APLL+ +G L
Sbjct: 336 FVMGLGMGAPLLVIGLSSGKL 356
>gi|296535777|ref|ZP_06897938.1| cytochrome c-type biogenesis protein CcdA [Roseomonas cervicalis
ATCC 49957]
gi|296263845|gb|EFH10309.1| cytochrome c-type biogenesis protein CcdA [Roseomonas cervicalis
ATCC 49957]
Length = 245
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 106/224 (47%), Gaps = 20/224 (8%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS---------RAQIIGDSIA 166
L + L F AG+V+ LSPC VLPL GY+ ++ +G+S R +G +
Sbjct: 5 LQMSGLLTAFLAGMVSFLSPC---VLPLVPGYV-SYVAGRSVAAERTAPDRLATVGLGLC 60
Query: 167 FSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFD-N 225
F LG AT +G GAS +A + + + I+ GL ++ L +P D
Sbjct: 61 FVLGFATVFVAMGAGASALSQALLRYRYEAGIVGGVVVILFGLMTAGVLRL-MPLQRDLR 119
Query: 226 FDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTT 285
F P + + + AY+ GL FA +PC PVL +L ATS+ +G LL +Y
Sbjct: 120 FMPTLSGG---TPLSAYVLGLAFAFGWTPCIGPVLGAILALTATSEISHLGIMLLAAYAA 176
Query: 286 GYVAPLLLAASFAGALQS--LLSFRKFSSWINPMSGALLLGGGL 327
G P LL A+FA A S R+ + ++G +++ G+
Sbjct: 177 GLGVPFLLVAAFADAFLRGPFRSLRRVGRVLQIVAGGIMVAMGV 220
>gi|422110484|ref|ZP_16380481.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309378717|emb|CBX22667.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 601
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 191 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 248
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N + +
Sbjct: 249 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSKLS 307
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 308 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 364
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 365 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 399
>gi|296314039|ref|ZP_06863980.1| thiol:disulfide interchange protein DsbD [Neisseria polysaccharea
ATCC 43768]
gi|296839287|gb|EFH23225.1| thiol:disulfide interchange protein DsbD [Neisseria polysaccharea
ATCC 43768]
Length = 601
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GLA T L+
Sbjct: 191 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLALTYTLV 248
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N + +
Sbjct: 249 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSKLS 307
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 308 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 364
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + K W+N + G +LL +Y
Sbjct: 365 IAIGTFGGHI-----LPKAGDWMNAVKYAFGFILLAVAVY 399
>gi|374295046|ref|YP_005045237.1| cytochrome c biogenesis protein [Clostridium clariflavum DSM 19732]
gi|359824540|gb|AEV67313.1| cytochrome c biogenesis protein [Clostridium clariflavum DSM 19732]
Length = 222
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 101/210 (48%), Gaps = 10/210 (4%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIG------AFGSGKSRAQIIGDSIAFSLGLATTLALL 178
F G++T +SPC L +LP+ Y+ G+ K + + +SI F G LL
Sbjct: 9 FAEGVLTFISPCILPMLPIYFIYLAGDSEESEKGTSKKKGNLALNSIGFVTGFTIIFVLL 68
Query: 179 GVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSS 238
G A+ G + + L + + + + GLN ++ + + + F+ NF S
Sbjct: 69 GATATTLGSFFKEHRDILKIVSGIVVFIFGLNFTGLVRIGVLNKQKGFEFNFKRLNFLKS 128
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFA 298
+ + G+ F++A SPC L++ L + S + G LLL Y+ G P +++A
Sbjct: 129 I---IFGMVFSVAWSPCVGAFLSSALAKASVSDTIMEGMLLLLIYSIGLGIPFIISAIAF 185
Query: 299 GALQSLL-SFRKFSSWINPMSGALLLGGGL 327
+++ L + ++ S ++ +SG+LL+ GL
Sbjct: 186 DSMKGLFKTVQRHSRLVSIISGSLLIIAGL 215
>gi|284105817|ref|ZP_06386221.1| cytochrome c biogenesis protein, transmembrane region [Candidatus
Poribacteria sp. WGA-A3]
gi|283830104|gb|EFC34370.1| cytochrome c biogenesis protein, transmembrane region [Candidatus
Poribacteria sp. WGA-A3]
Length = 249
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 109/238 (45%), Gaps = 24/238 (10%)
Query: 113 LSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYI---------GAFGSGKSRAQIIGD 163
+ A+S SL F AG ++ +SPC L ++P + YI A + R +I +
Sbjct: 2 IDAISQVSLFAAFSAGFLSFISPCVLPLVPSYVSYITGLSLEQLVDASERQRFRKAVILN 61
Query: 164 SIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIE---LQLP 220
S+ F G +T G ASF G+ + + + L +V GL LL +I+ +
Sbjct: 62 SLLFVTGFSTVFIAFGASASFVGQVLYEYQDLIRKIGAVLIVVFGLYLLGLIKWNAMMTE 121
Query: 221 SFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLL 280
+F R V ++L G FA A +PC P+L +L Y +T++ G LL
Sbjct: 122 RRLFSFGSRPVG-----YVGSFLIGTAFAAAWTPCVGPILGAILAYASTTESMQSGILLL 176
Query: 281 LSYTTGYVAPLLLAASFAGALQSLLSF----RKFSSWINPMSGALLLGGGLYTFLDRL 334
SY+ G P LL A ++ LS+ R++ ++ SGA L+ G ++D L
Sbjct: 177 ASYSLGLGLPFLLTAF---SVDRFLSYFQKARRYLHGVSLASGACLVLIGAMIYVDSL 231
>gi|219870761|ref|YP_002475136.1| cytochrome c-type biogenesis protein ccdA [Haemophilus parasuis
SH0165]
gi|219690965|gb|ACL32188.1| cytochrome c-type biogenesis protein ccdA [Haemophilus parasuis
SH0165]
Length = 216
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 87/179 (48%), Gaps = 12/179 (6%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGAS 183
+F AGL + LSPC ++P+ Y G G + +++ F +GL+ T LG
Sbjct: 11 VFLAGLASFLSPCIFPIVPI---YFGILSKGGKKVL---NTLLFIMGLSLTFVSLGFSFG 64
Query: 184 FAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS-SVQAY 242
F G T + A + I++G++ L II++ +F + N S SV+A+
Sbjct: 65 FLGDLLLNDTT--RVIAGIIVIILGIHQLGIIKI---NFLEQTKLVEIKTNGKSASVEAF 119
Query: 243 LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGAL 301
+ GLTF+L +PC P+LA++L L GG ++ Y G P ++ + F+ L
Sbjct: 120 VLGLTFSLGWTPCIGPILASVLALSGDEGSALYGGAMMFVYVLGLALPFIIFSFFSDEL 178
>gi|420426474|ref|ZP_14925528.1| cytochrome c biogenesis protein [Helicobacter pylori Hp A-9]
gi|393044113|gb|EJB45108.1| cytochrome c biogenesis protein [Helicobacter pylori Hp A-9]
Length = 239
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++TSKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSTSKDAY-GLILMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRTIEIVSGLVLILMGI 223
>gi|404487687|ref|YP_006711793.1| thiol-disulfide oxidoreductase CcdA [Bacillus licheniformis DSM 13
= ATCC 14580]
gi|52346686|gb|AAU39320.1| thiol-disulfide oxidoreductase CcdA [Bacillus licheniformis DSM 13
= ATCC 14580]
Length = 237
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 107/228 (46%), Gaps = 24/228 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSG--KSR-AQIIGDSI-----AFSLGL 171
+L + FG G ++ +SPC L + P + YI G K+R A+ I S+ AF G
Sbjct: 7 ALWLAFGGGFLSFISPCCLPLYPSFISYITGISVGDLKNRHAKHIKQSVMIHAAAFLAGF 66
Query: 172 ATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFF---DNFDP 228
+ +LG AS G + Q + + +VMGL LL + P+F F
Sbjct: 67 SVIFYILGFSASSVGLLFLQYHNLIRMLGGIFFVVMGLFLLGVFR---PAFMMKERRFSI 123
Query: 229 RAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLL--SYTTG 286
R +S+ L G+ FA +PC P+ T+ A ++P G ++ +Y+ G
Sbjct: 124 RKGKIGLLNSM---LVGMIFAAGWTPCIGPIFGTIA--YANFQNPDFGSAFMMITAYSLG 178
Query: 287 YVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
+ P LL A F G ++ L+ K+S+ + + GAL++ G+ + D +
Sbjct: 179 FAIPFLLMAFFIGNIRPLM---KYSNMLMKIGGALMIVIGILLYTDNM 223
>gi|182416520|ref|ZP_02947948.1| cytochrome C biogenesis protein transmembrane region family
[Clostridium butyricum 5521]
gi|237668165|ref|ZP_04528149.1| cytochrome C biogenesis protein transmembrane region family
[Clostridium butyricum E4 str. BoNT E BL5262]
gi|182379592|gb|EDT77074.1| cytochrome C biogenesis protein transmembrane region family
[Clostridium butyricum 5521]
gi|237656513|gb|EEP54069.1| cytochrome C biogenesis protein transmembrane region family
[Clostridium butyricum E4 str. BoNT E BL5262]
Length = 410
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ------IIGDSIAFSLGLATTLA 176
++F G+++ SPC L +LP+ L + R ++ ++I F+LG+++T
Sbjct: 8 IVFIEGILSIFSPCILPILPIYLSMLSNSSVQDMRESNFRNSVLLKNTIFFTLGISSTFF 67
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
+LG + + L I+MGL L II+ QL S F+ ++
Sbjct: 68 ILGSSIKALSTFLNANRNIIMIIGGLLIIIMGLFYLGIIKSQLLSREKRFNVKSKNM--- 124
Query: 237 SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLL-LSYTTGYVAPLLLAA 295
S V A++ G TF+ +PC P+LA++L +A+S D ++G LL L YT G++ P ++AA
Sbjct: 125 SPVSAFVLGFTFSFGWTPCIGPILASVL-VMASSSDSVLGANLLILVYTVGFILPFIIAA 183
Query: 296 SFAGALQSLLSFRKFSSWINPMS 318
F L ++KF N M
Sbjct: 184 LFYSKL-----YKKFDKLKNYME 201
>gi|384918633|ref|ZP_10018703.1| cytochrome c biogenesis protein, transmembrane region [Citreicella
sp. 357]
gi|384467467|gb|EIE51942.1| cytochrome c biogenesis protein, transmembrane region [Citreicella
sp. 357]
Length = 250
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 10/215 (4%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAF------GSGKSRAQIIGDSIAFSLGLAT 173
++ V AG+++ LSPC L ++P L ++ G++R + ++ F LGL+T
Sbjct: 14 AMLVALAAGVISFLSPCVLPIVPPYLAFMSGVSLSEMQAGGRARMRAFVTALFFVLGLST 73
Query: 174 TLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAA 233
LLG AS+ G + Q + + + IV GL+ L + + F D
Sbjct: 74 VFVLLGFTASWLGMFFLQNQVLMARISGVVVIVFGLHFLHVFRI---PFLDREARIETGE 130
Query: 234 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
+ S+ AY+ GL FA +PC P L +L A+ G LL Y G P LL
Sbjct: 131 SGGSAFGAYILGLAFAFGWTPCIGPQLGAILSLAASEASIARGTALLGVYAIGLGLPFLL 190
Query: 294 AASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
AA F L++ ++ I G LL+ GL
Sbjct: 191 AAVFLSRAMGLMNRIKRHMGLIEKAMGLLLIAVGL 225
>gi|73669222|ref|YP_305237.1| cytochrome c-type biogenesis protein CcdA [Methanosarcina barkeri
str. Fusaro]
gi|72396384|gb|AAZ70657.1| cytochrome c-type biogenesis protein CcdA [Methanosarcina barkeri
str. Fusaro]
Length = 214
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 14/206 (6%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASF 184
F AG+V+ LSPC L V+P Y + G GK R IA LGL+ + +G+ S
Sbjct: 11 FFAGVVSVLSPCILPVIPAVFAY--STGEGKFRP------IAIILGLSLSFTCMGIVTSI 62
Query: 185 AGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLA 244
G L + A L I+MG++LL +L + F F A + + +L
Sbjct: 63 FGATLTAYLDYLNIFAEVLLIIMGISLL--FDLNTFNIFGKFSSLANSKR-EGLLGGFLL 119
Query: 245 GLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQS- 303
GL+ + PC PVL ++L VA S + + GG +L Y+ G+ P+LL A ++ + S
Sbjct: 120 GLSLGIVWLPCVGPVLGSILTMVAVSGEVVYGGLMLFIYSLGFSVPMLLVA-YSASFSST 178
Query: 304 -LLSFRKFSSWINPMSGALLLGGGLY 328
L KF + ++G ++LG G Y
Sbjct: 179 RLQKVSKFGFPLKKVAGFIILGVGFY 204
>gi|366163158|ref|ZP_09462913.1| cytochrome C biogenesis protein transmembrane region [Acetivibrio
cellulolyticus CD2]
Length = 223
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 9/177 (5%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS------RAQIIGDSIAFSLGLATTLALL 178
F G++T +SPC L +LP+ Y+ S ++ +I +SI F G L
Sbjct: 10 FVEGIMTFVSPCILPMLPIYFFYLAGAADEDSAEHKLKKSTLIVNSIGFVAGFTIVFVLF 69
Query: 179 GVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSS 238
G A+ G L + + + + GLN + +I+L + + FD + NF S
Sbjct: 70 GATATSLGAFLKSHRDVLKIISGVVVFIFGLNFIGLIKLSILNKEKRFDYKFKRLNFIKS 129
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
+ + G+ FA +PC + LA+L + SK + G LL Y+ G P +++A
Sbjct: 130 I---VFGIVFAFGWTPCVSAFLASLFAMASNSKTLMEGMLLLFVYSIGLGIPFIISA 183
>gi|336452448|ref|YP_004606914.1| cytochrome c-type biogenesis protein CcdA [Helicobacter
bizzozeronii CIII-1]
gi|335332475|emb|CCB79202.1| cytochrome c-type biogenesis protein CcdA (DsbD analog)
[Helicobacter bizzozeronii CIII-1]
Length = 243
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 13/208 (6%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYI-----GAFGSGK-SRAQIIGDSIAFSLGLATTLALL 178
F AGL+ LSPC L +LP + YI SG+ +R I+ + F LG L
Sbjct: 19 FLAGLLAFLSPCVLPLLPAYMSYISQSSLDELKSGQFNRFAILLKACLFVLGFGLIFWL- 77
Query: 179 GVGASFAGKAYGQI-GTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN-FP 236
+GAS A + + G + + G+ I+ GL+ L I+ NF+ + N F
Sbjct: 78 -IGASMAKIMHNYLAGAWVRYVSGGIVILFGLHFLGILRFNFLYRSKNFNLSFESKNKFL 136
Query: 237 SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
++ ++ G FAL +PC P+ +++ + + + G LL+ + G+ P L+ A
Sbjct: 137 QALMPFILGAGFALGWTPCIGPIFTSIV--ILSGSQQVYGMALLIVFIVGFGLPFLVVAL 194
Query: 297 FAG-ALQSLLSFRKFSSWINPMSGALLL 323
AL+ L R+++ W SG +L+
Sbjct: 195 MVQRALEMLKKARRYAHWFEIASGVVLV 222
>gi|218768501|ref|YP_002343013.1| thiol:disulfide interchange protein [Neisseria meningitidis Z2491]
gi|385338335|ref|YP_005892208.1| thiol:disulfide interchange protein DsbD (protein-disulfide
reductase; disulfide reductase) [Neisseria meningitidis
WUE 2594]
gi|11354171|pir||B81868 thiol-disulfide interchange protein dsbD homolog NMA1719
[similarity] - Neisseria meningitidis (strain Z2491
serogroup A)
gi|121052509|emb|CAM08848.1| putative disulphide isomerase [Neisseria meningitidis Z2491]
gi|319410749|emb|CBY91132.1| thiol:disulfide interchange protein DsbD (protein-disulfide
reductase; disulfide reductase) [Neisseria meningitidis
WUE 2594]
Length = 613
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GL+ T L+
Sbjct: 203 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLSLTYTLV 260
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 261 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 319
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 320 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 376
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + + W+N + G +LL +Y
Sbjct: 377 IAIGTFGGHI-----LPRAGDWMNAVKYAFGFILLAVAVY 411
>gi|385855556|ref|YP_005902069.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis M01-240355]
gi|325204497|gb|ADY99950.1| cytochrome C biogenesis protein transmembrane region [Neisseria
meningitidis M01-240355]
Length = 613
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GL+ T L+
Sbjct: 203 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLSLTYTLV 260
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 261 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 319
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 320 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 376
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + + W+N + G +LL +Y
Sbjct: 377 IAIGTFGGHI-----LPRAGDWMNAVKYAFGFILLAVAVY 411
>gi|381210079|ref|ZP_09917150.1| holocytochrome c synthase [Lentibacillus sp. Grbi]
Length = 235
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 106/229 (46%), Gaps = 39/229 (17%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-----------SIAFSLGLAT 173
FGAG ++ +SPC L + P+ L YI +G S ++ + ++ F +G +
Sbjct: 11 FGAGFLSFISPCVLPLYPVFLSYI----TGMSVNELTNENKMLTKQSLMHTVFFLVGFSL 66
Query: 174 TLALLGVGASFAG-------KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNF 226
+LG G+SF QIG L + GL IV N +++
Sbjct: 67 VFIMLGFGSSFVAGFLESNRDIIRQIGAIL-IVFFGLVIVGVFNFEFLMK---------- 115
Query: 227 DPRAAAANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTT 285
D + N P+ +++ GL F+L +PC P+L ++ AT+ D +G +++SY
Sbjct: 116 DRKITFKNRPAGFFGSFVIGLAFSLGWTPCMGPILVIVISLAATNPD--LGMVMMISYIL 173
Query: 286 GYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
G+ P L+ + F G L + ++ SS I + G +++ G+ + D +
Sbjct: 174 GFSIPFLVLSFFIGKLSWI---KRNSSKIVKIGGYIMIFMGIALYFDWM 219
>gi|294677685|ref|YP_003578300.1| cytochrome c-type biogenesis protein CcdA [Rhodobacter capsulatus
SB 1003]
gi|6714962|gb|AAF26218.1|AF156103_2 c-type cytochrome biogenesis protein [Rhodobacter capsulatus]
gi|294476505|gb|ADE85893.1| cytochrome c-type biogenesis protein CcdA [Rhodobacter capsulatus
SB 1003]
Length = 252
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 11/203 (5%)
Query: 128 GLVTSLSPCTLSVLPLTLGYIGA-----FGSGK--SRAQIIGDSIAFSLGLATTLALLGV 180
G+++ LSPC L ++P L Y+G G+G+ +R ++ ++ F LGL+T ++G+
Sbjct: 23 GVLSFLSPCVLPIVPPYLAYMGGVTVSDMGAGRPAARGPVLLAALFFVLGLSTVFLMMGL 82
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
GAS G+A G L + + ++ G + + + + FD S++
Sbjct: 83 GASALGQALGAWKDTLAKVSGLVVMIFGAHFIGVYRIGFLDREMRFDTGDQGG---SALG 139
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGA 300
AYL GL FA +PC PVL T+ G LL +Y G P L+ A+F +
Sbjct: 140 AYLLGLAFAFGWTPCLGPVLGTIASMAMAEGTIGRGMGLLSAYAAGLGLPFLIVAAFFPS 199
Query: 301 LQSLLSF-RKFSSWINPMSGALL 322
L L+F R+ I +SG LL
Sbjct: 200 LGGALAFMRRNMGRIEKISGLLL 222
>gi|404378225|ref|ZP_10983322.1| hypothetical protein HMPREF9021_00175 [Simonsiella muelleri ATCC
29453]
gi|294484095|gb|EFG31778.1| hypothetical protein HMPREF9021_00175 [Simonsiella muelleri ATCC
29453]
Length = 605
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 104/221 (47%), Gaps = 22/221 (9%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSG-KSRAQIIGDSIAFSLGLATTLAL 177
T+L F AGL S + C +LP+ I SG K RA ++ S + GLA T L
Sbjct: 197 TNLFWFFVAGLGLSFTACMYPLLPIVSSIIVGDKSGSKKRAFVL--SFVYVQGLALTYTL 254
Query: 178 LGVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRA 230
+GV A G + Q + L A+GL + + L++ + +QLP S+F N +
Sbjct: 255 VGVLAGVTGALLTVWLQ-QAWVVLTAAGLMVALALSMFGLFNIQLPNAIQSYFQNKSNQL 313
Query: 231 AAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAP 290
+ + ++ G+ AL PC P LA LGY+ + D ++GG +L + G P
Sbjct: 314 SGGKL---ISVFVMGMLSALIVGPCVAPPLAAALGYIGKTGDAVLGGAVLYAMALGTGVP 370
Query: 291 LLLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
L+L +F G + + +W+N + G +LL +Y
Sbjct: 371 LMLIGTFGGHI-----LPRAGNWMNGIKYAFGVILLAVAVY 406
>gi|384918253|ref|ZP_10018336.1| cytochrome c biogenesis protein [Citreicella sp. 357]
gi|384467876|gb|EIE52338.1| cytochrome c biogenesis protein [Citreicella sp. 357]
Length = 245
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRA----------QIIGDSIAFSLGLATTLA 176
AGL++ +PC L ++P L Y+ + RA +++ ++ F+ G+ T
Sbjct: 12 AGLLSFFTPCILPMVPFYLCYMAGLSMTQLRADTGLAPGAQRRLVLSALLFAAGVTTIFV 71
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
LLG+GA+ AG+A+ L A+ + V GL+ L +I + F + R P
Sbjct: 72 LLGLGATAAGRAFADWKQPLSYVAALVLAVFGLHFLGVIRVP----FLLREARLETTTKP 127
Query: 237 SS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
++ + AY+ GL F +PC P LA++L + D L GG LL Y G AP ++AA
Sbjct: 128 TTALGAYVMGLAFGFGWTPCVGPALASILMIASGMGDLLRGGLLLFVYGVGMTAPFVVAA 187
Query: 296 SFAGALQSLLS-FRKFSSWINPMSGALLL 323
F+G L + R ++ + GA+LL
Sbjct: 188 LFSGPFLRLTARHRSKLKYVEKIMGAMLL 216
>gi|433475926|ref|ZP_20433263.1| disulfide interchange protein DsbD [Neisseria meningitidis 88050]
gi|433480092|ref|ZP_20437379.1| disulfide interchange protein DsbD [Neisseria meningitidis 63041]
gi|433513828|ref|ZP_20470616.1| disulfide interchange protein DsbD [Neisseria meningitidis 63049]
gi|433516077|ref|ZP_20472843.1| disulfide interchange protein DsbD [Neisseria meningitidis 2004090]
gi|433517900|ref|ZP_20474643.1| disulfide interchange protein DsbD [Neisseria meningitidis 96023]
gi|433519219|ref|ZP_20475942.1| disulfide interchange protein DsbD [Neisseria meningitidis 65014]
gi|433524557|ref|ZP_20481215.1| disulfide interchange protein DsbD [Neisseria meningitidis 97020]
gi|433528577|ref|ZP_20485185.1| disulfide interchange protein DsbD [Neisseria meningitidis NM3652]
gi|433530784|ref|ZP_20487368.1| disulfide interchange protein DsbD [Neisseria meningitidis NM3642]
gi|433533050|ref|ZP_20489610.1| disulfide interchange protein DsbD [Neisseria meningitidis 2007056]
gi|433535014|ref|ZP_20491550.1| disulfide interchange protein DsbD [Neisseria meningitidis 2001212]
gi|433541364|ref|ZP_20497812.1| disulfide interchange protein DsbD [Neisseria meningitidis 63006]
gi|14285426|sp|Q9JTL9.2|DSBD_NEIMA RecName: Full=Thiol:disulfide interchange protein DsbD; AltName:
Full=Protein-disulfide reductase; Short=Disulfide
reductase; Flags: Precursor
gi|432209035|gb|ELK65006.1| disulfide interchange protein DsbD [Neisseria meningitidis 88050]
gi|432215052|gb|ELK70943.1| disulfide interchange protein DsbD [Neisseria meningitidis 63041]
gi|432246475|gb|ELL01922.1| disulfide interchange protein DsbD [Neisseria meningitidis 63049]
gi|432252403|gb|ELL07759.1| disulfide interchange protein DsbD [Neisseria meningitidis 2004090]
gi|432252644|gb|ELL07996.1| disulfide interchange protein DsbD [Neisseria meningitidis 96023]
gi|432256147|gb|ELL11471.1| disulfide interchange protein DsbD [Neisseria meningitidis 65014]
gi|432258784|gb|ELL14065.1| disulfide interchange protein DsbD [Neisseria meningitidis 97020]
gi|432264256|gb|ELL19460.1| disulfide interchange protein DsbD [Neisseria meningitidis NM3652]
gi|432265594|gb|ELL20786.1| disulfide interchange protein DsbD [Neisseria meningitidis NM3642]
gi|432265793|gb|ELL20984.1| disulfide interchange protein DsbD [Neisseria meningitidis 2007056]
gi|432270764|gb|ELL25900.1| disulfide interchange protein DsbD [Neisseria meningitidis 2001212]
gi|432276905|gb|ELL31959.1| disulfide interchange protein DsbD [Neisseria meningitidis 63006]
Length = 601
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GL+ T L+
Sbjct: 191 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLSLTYTLV 248
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 249 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 307
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 308 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 364
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + + W+N + G +LL +Y
Sbjct: 365 IAIGTFGGHI-----LPRAGDWMNAVKYAFGFILLAVAVY 399
>gi|222054625|ref|YP_002536987.1| cytochrome c biogenesis protein transmembrane region [Geobacter
daltonii FRC-32]
gi|221563914|gb|ACM19886.1| cytochrome c biogenesis protein transmembrane region [Geobacter
daltonii FRC-32]
Length = 242
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 99/226 (43%), Gaps = 20/226 (8%)
Query: 124 IFGA---GLVTSLSPCTLSVLPLTLGYIGAFG---------SGKSRAQIIGDSIAFSLGL 171
IFGA G ++ LSPC L ++P + YI S K R Q I S+ F G
Sbjct: 8 IFGALIAGFLSFLSPCVLPLIPSYITYITGLSFNDLQAEHPSHKVRQQTIIHSLCFIAGF 67
Query: 172 ATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAA 231
+ LLG A+F G T L L + G+++ I ++ +
Sbjct: 68 TSVFVLLGASATFIGSFLQSHMTLLQKVGGALIFIFGIHVTGIFDIGMLLGEKRLTLHRK 127
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
A F S ++ G+ F+ +PC P+LA++L AT G +LLL+Y+ G P
Sbjct: 128 PAGFLGS---FVVGVAFSAGWTPCIGPILASILMVAATESTIYRGVSLLLAYSIGLAVPF 184
Query: 292 LLAASFAGALQSLLSFRKFSSWI---NPMSGALLLGGGLYTFLDRL 334
L++ Q L+ F +F +I ++G L+ G+ F + L
Sbjct: 185 FLSS--LALHQFLVLFTRFKKYIRIFEIITGVFLMVVGILIFTNNL 228
>gi|421565887|ref|ZP_16011654.1| disulfide interchange protein DsbD [Neisseria meningitidis NM3081]
gi|402342625|gb|EJU77784.1| disulfide interchange protein DsbD [Neisseria meningitidis NM3081]
Length = 601
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLG-YIGAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ +G +GK+RA ++ S+ + GL+ T L+
Sbjct: 191 NLLAFFLAGLGLSFTACMYPLLPIVSSIVVGDKKAGKARAFVL--SVVYVQGLSLTYTLV 248
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
G+ A G + Q + LAAS L +V+ L++ + +QLP S+F N R +
Sbjct: 249 GIVAGLTGALLTVWLQ-QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLS 307
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V ++ G+ AL PC P LA LGY+ + D ++GG L + G PL
Sbjct: 308 GGKI---VSVFIMGILSALIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPL 364
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+ +F G + + W+N + G +LL +Y
Sbjct: 365 IAIGTFGGHI-----LPRAGDWMNAVKYAFGFILLAVAVY 399
>gi|56419435|ref|YP_146753.1| cytochrome c biogenesis protein [Geobacillus kaustophilus HTA426]
gi|56379277|dbj|BAD75185.1| cytochrome c biogenesis protein (holocytochrome-c synthase)
[Geobacillus kaustophilus HTA426]
Length = 235
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 17/218 (7%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFG-------SGKSRAQIIGDSIAFSLGLATTLAL 177
FGAGL++ +SPC L + P L YI +G + + I + F LG +
Sbjct: 10 FGAGLLSFISPCCLPLYPAFLSYITGVSVDEIKKENGMLQKRAILHTFFFLLGFSVIFIA 69
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
+G G S GK + + ++ + GL +L + PSF D R N PS
Sbjct: 70 IGFGTSVIGKLFVDYQDLIRQISALFIVFFGLVILGVFS---PSFMMK-DKRLVFRNKPS 125
Query: 238 S-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
+ L G+ FA +PC+ P+L +++ AT P + +Y G+ P + +
Sbjct: 126 GYFGSILIGIGFAAGWTPCTGPILVSVIALAATK--PSAAMLYMFAYVLGFAVPFFIMSF 183
Query: 297 FAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
F G L + +K+++ I + G L++ G+ F D +
Sbjct: 184 FIGKLNWI---KKYNTVIVRVGGILMVIMGIMLFFDWM 218
>gi|253702064|ref|YP_003023253.1| cytochrome C biogenesis protein transmembrane region [Geobacter sp.
M21]
gi|251776914|gb|ACT19495.1| cytochrome c biogenesis protein transmembrane region [Geobacter sp.
M21]
Length = 238
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 98/222 (44%), Gaps = 20/222 (9%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFG---------SGKSRAQIIGDSIAFSLGLATTL 175
F AGL++ LSPC L ++P + YI S K R Q I S+ F G
Sbjct: 12 FVAGLLSFLSPCVLPLIPSYITYITGLSFADLQAEHPSHKVRQQTIIHSLLFIAGFTCVF 71
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LLG ASF G + T + + ++ G+++ + ++ L A +
Sbjct: 72 VLLGASASFLGDFLQEHKTAIRRIGGVMIVIFGVHVSGLFDIGLLLGEKKLTLHRKPAGY 131
Query: 236 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
S ++ G+ FA +PC P+LAT+L AT G LLL+Y+ G P LA+
Sbjct: 132 LGS---FVVGVVFAAGWTPCIGPILATILAVAATEGR---GVWLLLTYSMGLAIPFFLAS 185
Query: 296 SFAGALQSLLSFRKFSSWI---NPMSGALLLGGGLYTFLDRL 334
Q L+ F++F I ++G ++ G+ F + L
Sbjct: 186 --LALHQFLVFFKRFKRHIRLFEIITGVFMVIVGILIFTNSL 225
>gi|45358520|ref|NP_988077.1| hypothetical protein MMP0957 [Methanococcus maripaludis S2]
gi|44921278|emb|CAF30513.1| conserved hypothetical protein [Methanococcus maripaludis S2]
Length = 217
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 101/207 (48%), Gaps = 17/207 (8%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
L +IF AG+ T+L PC ++VLP L Y FG SR + S +F +G + + LG
Sbjct: 2 DLFLIFLAGISTALGPCIVTVLPFVLAY--TFGISNSRFEGFLVSFSFMVGFSIVFSTLG 59
Query: 180 VGASFAGKAYGQI--GTGLPLAASGLAIVMGLNLL--EIIELQLPSFFDNFDPRAAAANF 235
V +S A+G T L A AI+ G+ +L + + F F + + N
Sbjct: 60 VLSS----AFGIFLNFTLLKYIAGSFAIIFGILVLFNKNFTFRKEGVFQKFSKKLSNMND 115
Query: 236 PS----SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
S + + + G+ + A+ C+ P+LA +L +VA+ D G LL+Y+ GY P+
Sbjct: 116 ISLHVKILNSIVLGIVYGFGANICADPILAGILTFVASKADVYYGFFALLTYSLGYGIPI 175
Query: 292 LLAASFAGALQSLLS---FRKFSSWIN 315
+ ++ + ++ +KF ++I+
Sbjct: 176 IFLSTLGAESKQIVEKIVKKKFITYIS 202
>gi|302342032|ref|YP_003806561.1| protein-disulfide reductase [Desulfarculus baarsii DSM 2075]
gi|301638645|gb|ADK83967.1| Protein-disulfide reductase [Desulfarculus baarsii DSM 2075]
Length = 456
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 96/187 (51%), Gaps = 7/187 (3%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGV 180
+A+ F GL+ + +PC V+P+T+ Y GA SG ++ ++ + G+ + LG
Sbjct: 50 MALSFLMGLLLNATPCVYPVIPITISYFGARDSGGKGGAMLA-ALLYWAGITVMYSALGT 108
Query: 181 GASFAGKAYGQIGTGLP--LAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSS 238
A+ G GQ + P + S + + + L++ + E+++P+ R AA N
Sbjct: 109 AAALTGGILGQALSYTPVIIILSAILVALALSMFGLWEVRMPTGLT----RVAAKNRAGL 164
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFA 298
++ GL + A+PC+ PV+A L+G+VA PL G + ++ + G PL L A F+
Sbjct: 165 SGSFFMGLFSGVLAAPCAGPVVAGLMGHVAEVGSPLYGLAVFVALSLGLGLPLALVALFS 224
Query: 299 GALQSLL 305
+ +LL
Sbjct: 225 ERIAALL 231
>gi|293401941|ref|ZP_06646081.1| putative cytochrome C-type biogenesis protein [Erysipelotrichaceae
bacterium 5_2_54FAA]
gi|291304599|gb|EFE45848.1| putative cytochrome C-type biogenesis protein [Erysipelotrichaceae
bacterium 5_2_54FAA]
Length = 413
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 20/207 (9%)
Query: 114 SALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQI------IGDSIAF 167
+ S+ ++F G+++ LSPC L +LP+ +GY+ GS + QI I +++F
Sbjct: 6 DTMQHISILMVFMEGVLSFLSPCVLPLLPVYMGYL--IGSDVNNKQIRKKRFVIFFTLSF 63
Query: 168 SLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFD 227
G+ T + L+ + + + + L IV+GL QL F NF
Sbjct: 64 IFGIFTAILLMNISITLISSFFRDHMSIFIKVGGILIIVLGL-------FQLGFFKSNFL 116
Query: 228 PRAAAANFPSSVQ-----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS 282
+ F + A+L G TF+ A +PC P L+++L +S++ + L++
Sbjct: 117 GKTRRLPFTVKKEMNLLLAFLMGFTFSFAWTPCIGPALSSILLLANSSQNFWMSNFLMVI 176
Query: 283 YTTGYVAPLLLAASFAGALQSLLSFRK 309
Y G P LL F ++ + LS K
Sbjct: 177 YALGLTIPFLLIGIFTDSISNWLSNHK 203
>gi|325265511|ref|ZP_08132232.1| cytochrome c-type biogenesis protein CcdA [Clostridium sp. D5]
gi|324029259|gb|EGB90553.1| cytochrome c-type biogenesis protein CcdA [Clostridium sp. D5]
Length = 448
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 108/231 (46%), Gaps = 31/231 (13%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGK---------SRAQIIGDSIAFSLGLATT 174
+F GL++ SPC L ++PL +GY+ G+ K SR +++ +++ F +G++ T
Sbjct: 14 VFVQGLLSFFSPCVLPLIPLYIGYLAG-GTRKVGEDGKVYFSRKKVMINTLFFVIGVSFT 72
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEII--------ELQLPSFFDNF 226
LLG GAS G + + L +V G L I E +LP D
Sbjct: 73 FFLLGFGASVLGNFFKGSQSMFARIGGILIVVFGFYQLGIFGKSKVLSQEHRLPFHLDKL 132
Query: 227 DPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTG 286
A P + A + G TF+ A +PC P L+++L A++ + G L+ YT G
Sbjct: 133 ------AMSPWT--ALIMGFTFSFAWTPCVGPALSSVLLMSASASTKVWGFALIGVYTLG 184
Query: 287 YVAPLLLAASFAGALQSLLSFRKFSSWIN---PMSGALLLGGGLYTFLDRL 334
+V P L F+ L L F+K ++ + + G L++ GL F ++
Sbjct: 185 FVLPFLAVGIFSTTLLDL--FKKHNNVVKYTVKVGGVLMILMGLMMFTGKM 233
>gi|291518701|emb|CBK73922.1| Cytochrome c biogenesis protein [Butyrivibrio fibrisolvens 16/4]
Length = 426
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 29/234 (12%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIG-----AFGSGK---SRAQIIGDSIAFSLGL 171
S+ +F GL++ SPC L ++P+ +GY+ G G R +++ ++I F +G+
Sbjct: 2 SIVSVFIEGLLSFFSPCVLPLIPVYIGYLSGGTLKTTGDGHMVYDRKKVVINTIFFVIGI 61
Query: 172 ATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIV----------MGLNLLEIIELQLPS 221
+ +LG G S G+ + G + A +G I+ +G N + + +LP
Sbjct: 62 SMAFFVLGFGISAVGRFFS--GYQMIFARAGGIIIVLFGLYQLGFLGTNRILSGDYRLPV 119
Query: 222 FFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLL 281
F+ S + A L G + A +PC PVL+++L AT+ G L+
Sbjct: 120 QFEKMTM--------SPITAILMGFVISFAWTPCIGPVLSSVLIMAATAGSSANGFGLIA 171
Query: 282 SYTTGYVAPLLLAASFAGALQSLLSFRK-FSSWINPMSGALLLGGGLYTFLDRL 334
YT GY+ P +L F L + S K + + G +L+ GL F ++
Sbjct: 172 VYTLGYIIPFILVGFFTNTLLNFFSKHKGVVKYTVKIGGVILIVMGLMMFTGKM 225
>gi|319408655|emb|CBI82310.1| cytochrome c-type biogenesis protein [Bartonella schoenbuchensis
R1]
Length = 262
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 93/206 (45%), Gaps = 16/206 (7%)
Query: 115 ALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGY-----IGAFGSGKS------RAQIIGD 163
L F+ L+V F AG ++ LSPC L ++P L Y + F S K R ++
Sbjct: 2 VLEFSILSVFF-AGALSFLSPCVLPLVPPYLCYMAGISVDDFRSEKENGNTSVRLALLSS 60
Query: 164 SIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFF 223
AF LG T LG AS GK G +AA + I+ GLN L + ++ L S
Sbjct: 61 VFAFVLGFTTVFVALGASASTIGKFIGYYRDWFAIAAGIIIIIFGLNFLHVFKINLLSRE 120
Query: 224 DNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSY 283
F R + AY+ GL FA +PC P+L ++ T + G LL Y
Sbjct: 121 ARFQTRKIPTG---PLGAYVIGLAFAFGWTPCIGPILGPIITLAGTKETVGEGAILLGFY 177
Query: 284 TTGYVAPLLLAASFAGALQSLL-SFR 308
+ G P +LAA F+ + L +FR
Sbjct: 178 SLGLAVPFVLAALFSSSFMKFLGAFR 203
>gi|262065857|ref|ZP_06025469.1| cytochrome c-type biogenesis protein CcdA [Fusobacterium
periodonticum ATCC 33693]
gi|291380444|gb|EFE87962.1| cytochrome c-type biogenesis protein CcdA [Fusobacterium
periodonticum ATCC 33693]
Length = 218
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 81/150 (54%), Gaps = 18/150 (12%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAG 186
AG+ + SPC ++P+ YI +G+ ++ + ++AF LGL+ T +LG GA F G
Sbjct: 14 AGIASFFSPCIFPIIPV---YISILSNGEKKS--VSKTLAFVLGLSVTYIVLGFGAGFIG 68
Query: 187 KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQA----Y 242
+ + + + + + L +++GL +++++L+ F + N+ Q+ +
Sbjct: 69 ELF--LNSKVRVIGGILVVILGLFQMDVLKLK-------FLEKTKVMNYEGEEQSLFSTF 119
Query: 243 LAGLTFALAASPCSTPVLATLLGYVATSKD 272
L GLTF+L +PC P+LA++L +S D
Sbjct: 120 LLGLTFSLGWTPCVGPILASILILAGSSGD 149
>gi|167856312|ref|ZP_02479043.1| RNA polymerase sigma factor [Haemophilus parasuis 29755]
gi|167852588|gb|EDS23871.1| RNA polymerase sigma factor [Haemophilus parasuis 29755]
Length = 216
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 87/179 (48%), Gaps = 12/179 (6%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGAS 183
+F AGL + LSPC ++P+ Y G G + +++ F +GL+ T LG
Sbjct: 11 VFLAGLASFLSPCIFPIVPI---YFGILSKGGKKVL---NTLLFIMGLSLTFVSLGFSFG 64
Query: 184 FAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS-SVQAY 242
F G T + A + I++G++ L II++ +F + N S SV+A+
Sbjct: 65 FLGDLLLNDIT--RVIAGIIVIILGIHQLGIIKI---NFLEQTKLVEIKTNGKSASVEAF 119
Query: 243 LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGAL 301
+ GLTF+L +PC P+LA++L L GG ++ Y G P ++ + F+ L
Sbjct: 120 VLGLTFSLGWTPCIGPILASVLALSGDEGSALYGGAMMFVYVLGLALPFIIFSFFSDEL 178
>gi|160946245|ref|ZP_02093456.1| hypothetical protein PEPMIC_00207 [Parvimonas micra ATCC 33270]
gi|158447768|gb|EDP24763.1| cytochrome C biogenesis protein transmembrane region [Parvimonas
micra ATCC 33270]
Length = 230
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 107 EAVLGQLSALSFTSLAVIFG--AGLVTSLSPCTLSVLPLTLGYI-GAFGSGKSRAQIIGD 163
E+++G+ SF+ A I G++TS+SPC+L+ +PL +G++ G RA
Sbjct: 6 ESIIGE-GLKSFSIFAPILALLGGILTSISPCSLASIPLIIGFMTGTKEDDTKRA--FKT 62
Query: 164 SIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFF 223
S+ F++G+A T LGV A+ K + Q G + + I+M L E+I +
Sbjct: 63 SVVFAIGMAITYTTLGVLAALLSKIFNQSGPFWNIFLGIVMILMALQTWEVINVVPSKIL 122
Query: 224 DNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSY 283
N + V A + G+ L +SPCSTP+L LL VA+ L G L L Y
Sbjct: 123 TNKSKKTGY------VGALIVGIMAGLFSSPCSTPILVALLAIVASKGSLLWGVLLFLLY 176
Query: 284 TTGYVAPLLLA---ASFAGALQSLLSFRKFSS 312
+ G +++A A F G + S S+ K S
Sbjct: 177 SIGNSILVVVAGTSAGFVGKVMSNKSYGKISD 208
>gi|134299390|ref|YP_001112886.1| cytochrome c biogenesis protein, transmembrane region
[Desulfotomaculum reducens MI-1]
gi|134052090|gb|ABO50061.1| cytochrome c biogenesis protein, transmembrane region
[Desulfotomaculum reducens MI-1]
Length = 231
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 101/217 (46%), Gaps = 15/217 (6%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIG-----AFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
FGAG+V+ LSPC L ++P L Y+ A + +R Q+I ++ F+LG LG
Sbjct: 10 FGAGIVSFLSPCILPLVPGYLSYLAGVSVTADSTEINRRQLISRALLFNLGFILVFISLG 69
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIE---LQLPSFFDNFDPRAAAANFP 236
V S+ GK L +MGL++ I++ L F N P
Sbjct: 70 VTGSYLGKVLLTYKPVLTKIGGIFIFLMGLHMTGILKWSTLYRTYKFHNNSPVTGP---- 125
Query: 237 SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA- 295
+ A L G+TFA +PC PVL ++L Y S G LL Y+ G P +LAA
Sbjct: 126 --LGALLLGVTFAAGWTPCVGPVLGSILVYAGMSGTVSKGVLLLGVYSLGLAIPFMLAAI 183
Query: 296 SFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLD 332
S + ++ L K+ +I+ +SG +L+ G F D
Sbjct: 184 SLSWTVKYLPRISKYLPYISLVSGIVLMIVGGLLFFD 220
>gi|52078813|ref|YP_077604.1| hypothetical protein BL01701 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319648894|ref|ZP_08003103.1| integral membrane protein [Bacillus sp. BT1B_CT2]
gi|423680713|ref|ZP_17655552.1| hypothetical protein MUY_00524 [Bacillus licheniformis WX-02]
gi|52002024|gb|AAU21966.1| integral membrane protein [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317388888|gb|EFV69706.1| integral membrane protein [Bacillus sp. BT1B_CT2]
gi|383441819|gb|EID49528.1| hypothetical protein MUY_00524 [Bacillus licheniformis WX-02]
Length = 233
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 107/228 (46%), Gaps = 24/228 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSG--KSR-AQIIGDSI-----AFSLGL 171
+L + FG G ++ +SPC L + P + YI G K+R A+ I S+ AF G
Sbjct: 3 ALWLAFGGGFLSFISPCCLPLYPSFISYITGISVGDLKNRHAKHIKQSVMIHAAAFLAGF 62
Query: 172 ATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFF---DNFDP 228
+ +LG AS G + Q + + +VMGL LL + P+F F
Sbjct: 63 SVIFYILGFSASSVGLLFLQYHNLIRMLGGIFFVVMGLFLLGVFR---PAFMMKERRFSI 119
Query: 229 RAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLL--SYTTG 286
R +S+ L G+ FA +PC P+ T+ A ++P G ++ +Y+ G
Sbjct: 120 RKGKIGLLNSM---LVGMIFAAGWTPCIGPIFGTIA--YANFQNPDFGSAFMMITAYSLG 174
Query: 287 YVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
+ P LL A F G ++ L+ K+S+ + + GAL++ G+ + D +
Sbjct: 175 FAIPFLLMAFFIGNIRPLM---KYSNMLMKIGGALMIVIGILLYTDNM 219
>gi|395784179|ref|ZP_10464018.1| hypothetical protein ME3_00674 [Bartonella melophagi K-2C]
gi|395423934|gb|EJF90122.1| hypothetical protein ME3_00674 [Bartonella melophagi K-2C]
Length = 262
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 115 ALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAF-----------GSGKSRAQIIGD 163
L F+ L+V F AG ++ LSPC L ++P L Y+ G+ R ++
Sbjct: 2 VLEFSILSVFF-AGALSFLSPCVLPLVPPYLCYMAGISVDDFRSEKENGNASVRLVLLSS 60
Query: 164 SIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFF 223
AF LG T LG AS GK G +AA + I+ GLN L + ++ L S
Sbjct: 61 VFAFVLGFTTIFVALGASASTIGKFIGYYRDWFAIAAGIIIIIFGLNFLHVFKINLLSR- 119
Query: 224 DNFDPRAAAANFPS-SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS 282
+ R P+ + AY+ GL FA +PC P+L ++ T + G LL
Sbjct: 120 ---EARFQTHKIPTGPLGAYVIGLAFAFGWTPCIGPILGPIITLAGTKETVAEGAILLGF 176
Query: 283 YTTGYVAPLLLAASFAGALQSLL-SFR 308
Y+ G P +LAA F+ + L +FR
Sbjct: 177 YSLGLAVPFVLAALFSSSFMKFLRAFR 203
>gi|433445590|ref|ZP_20409940.1| cytochrome C biogenesis membrane protein, DsbD family
[Anoxybacillus flavithermus TNO-09.006]
gi|432001004|gb|ELK21891.1| cytochrome C biogenesis membrane protein, DsbD family
[Anoxybacillus flavithermus TNO-09.006]
Length = 234
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 109/234 (46%), Gaps = 25/234 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-----------SIAFS 168
L V FGAG+++ +SPC L + P L YI +G S + + D ++ F
Sbjct: 4 QLFVAFGAGVLSFISPCCLPLYPAFLSYI----TGVSVSDLKSDYALLQKRSLLHTLFFL 59
Query: 169 LGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
LG + +G G S G+ + + + L + G ++ I + P+F D
Sbjct: 60 LGFSFIFIAIGFGTSILGRFFHTYQDLIRQIGAILMVFFGFVIIGIFK---PTFLMT-DR 115
Query: 229 RAAAANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGY 287
R + PS + ++L G+ FA +PC+ +L +++ AT +P +G + +Y+ G+
Sbjct: 116 RLSFQQRPSGYIGSFLIGMAFAAGWTPCTGSILVSVIALAAT--NPSLGVVYMTAYSLGF 173
Query: 288 VAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFPTTMAM 341
P LL + F G + + RK + + G +++G G+ F D + T+ M
Sbjct: 174 ALPFLLLSFFIGKMGWI---RKHHVKLMKVGGYVMIGMGVVLFFDWMTKITIYM 224
>gi|225023194|ref|ZP_03712386.1| hypothetical protein EIKCOROL_00046 [Eikenella corrodens ATCC
23834]
gi|224944018|gb|EEG25227.1| hypothetical protein EIKCOROL_00046 [Eikenella corrodens ATCC
23834]
Length = 594
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 130/315 (41%), Gaps = 31/315 (9%)
Query: 17 HQRSTAYGKQMAPGVSVHKSHSVAKKSIRCFSTNTFLSTLTVANLAAIGNAKALTMENVL 76
+ +GKQ +VH +V K + + + TLT A G + +
Sbjct: 84 EKEDEFFGKQ-----TVHYHQAVVKLPFQSAAPAAYRLTLTYQGCADAGVCYPPVTKTLE 138
Query: 77 EGAASVYTMADGSLGDMFGGFLYSAGQQANEAV--LGQLSALSFT--------SLAVIFG 126
A VY D + G ++A Q A + Q F+ +L F
Sbjct: 139 IKGAGVY--GDTAAPPAGGSNRFTAPQDGAPAASSVPQPRKSPFSLSRDTLGANLLAFFS 196
Query: 127 AGLVTSLSPCTLSVLPLTLGYI--GAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASF 184
G+ S + C +LP+ G I +GK R I+ S + GLA T A +GV A
Sbjct: 197 FGIGLSFTACMYPLLPIVSGIIVGDRANAGKRRGLIL--SSVYVQGLALTYAAVGVLAGL 254
Query: 185 AGKAYGQIGTGLP---LAASGLAIVMGLNLLEIIELQLPSFFDN-FDPRAAAANFPSSVQ 240
G + P L+A+ L +V+ L + ++ +QLPSF + F +++ +
Sbjct: 255 TGSLL-TVWLQQPWVVLSAAALIVVLALGMFDVFTIQLPSFIQSYFQQQSSKLSGGKMAS 313
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGA 300
++ G+ AL PC P LA LGY+ + D +GG L S G PL+L +F G
Sbjct: 314 VFVMGMLSALIVGPCVAPPLAVALGYIGQTGDAALGGLALYSMALGTGVPLVLVGTFGGH 373
Query: 301 LQSLLSFRKFSSWIN 315
+ K +W+N
Sbjct: 374 I-----LPKAGAWMN 383
>gi|381208994|ref|ZP_09916065.1| cytochrome c-type biogenesis protein CcdA [Lentibacillus sp. Grbi]
Length = 247
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 112/238 (47%), Gaps = 27/238 (11%)
Query: 113 LSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSG--------KSRAQIIGDS 164
++A S ++ + FGAG+++ LSPCTL + P L YI + R++++ S
Sbjct: 1 MTAASNLTIWLAFGAGILSFLSPCTLPIFPAYLSYITGMSVKELKENQDIRIRSKLLIHS 60
Query: 165 IAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAI-------VMGLNLLEIIEL 217
+ F LG++T LGVG SF G+ + TG SGL I ++G+ L L
Sbjct: 61 VFFLLGVSTVFLGLGVGISFLGQWIQGMLTG----DSGLFIQRIAGIFIIGMGLFVAGLL 116
Query: 218 QLPSFFDNFDPRAAAANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIG 276
+ SF + R A P+ + G+ FA +PC P+ A++L A+ +P G
Sbjct: 117 NISSFMK--EKRMQFARKPAGYLGTIFVGVGFAAGWTPCIGPIFASILAVAAS--NPTQG 172
Query: 277 GTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
Y G+ P L+ F G+ +L ++S I GA+++ G+ F ++
Sbjct: 173 TIYTTMYIIGFALPFLILTFFLGSTHLIL---RYSQKIMKAGGAVMIFMGILLFTGQM 227
>gi|450004767|ref|ZP_21826230.1| putative cytochrome C biogenesis protein [Streptococcus mutans
NMT4863]
gi|449189336|gb|EMB91003.1| putative cytochrome C biogenesis protein [Streptococcus mutans
NMT4863]
Length = 237
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 17/206 (8%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-------SIAFS 168
L ++ +F GL++ SPC L +LP+ +G + G GK +II D + F
Sbjct: 3 LQHITVLTLFIEGLLSFFSPCVLPILPVYIGILAGQGEGKQSGEIIWDRRKVFTNTFLFI 62
Query: 169 LGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
G+A T +L +S + L L ++MGL + +I+ S F N +
Sbjct: 63 SGIAATFFILAFASSLISQFLQSHIQFLQNLGGILILIMGLVQIGLIK----SHFFNREY 118
Query: 229 RAAAANFPSSVQ-----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSY 283
A + + + A+L G TF+ + +PC P+LA++ Y +T + + L+L Y
Sbjct: 119 SAKNKVYQAGQKVTPLIAFLMGFTFSFSWTPCIGPILASVFLYASTHQG-IYSVLLILIY 177
Query: 284 TTGYVAPLLLAASFAGALQSLLSFRK 309
G+V P L A F+ + S+ +K
Sbjct: 178 CLGFVIPFALIALFSQRVMSVFKKQK 203
>gi|402298330|ref|ZP_10818032.1| cytochrome c-type biogenesis protein CcdA [Bacillus alcalophilus
ATCC 27647]
gi|401726484|gb|EJS99710.1| cytochrome c-type biogenesis protein CcdA [Bacillus alcalophilus
ATCC 27647]
Length = 236
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 17/218 (7%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAF--GSGKSRAQIIG-----DSIAFSLGLATTLAL 177
FGAG+++ +SPC L + P L YI K + + + + F LG +T +
Sbjct: 10 FGAGVLSFISPCNLPLYPAFLSYITGMTVDEMKKKGRFLPPRAMLHTFIFILGFSTIFVV 69
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
LG+ + G + + + + I+ GL L +I PSF + + +N PS
Sbjct: 70 LGMSTTLVGDLFLKYNNLIRQLGAIFIILFGLVTLGVIR---PSFLMK-NHQFQFSNKPS 125
Query: 238 S-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
+ Y+ G+ FA +PC P+LA+++ + +P G + +Y+ G+ P L
Sbjct: 126 GYIGTYVIGIAFAAGWTPCIGPILASVI--TLSMTNPGSGMLYMSAYSIGFAIPFFLMTF 183
Query: 297 FAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
F G + + +K+++ I SG L++ G++ + D +
Sbjct: 184 FIGRMNWI---KKYTNLIMKFSGILMIIFGVFLYFDWM 218
>gi|149909176|ref|ZP_01897833.1| Cytochrome c biogenesis protein, transmembrane region [Moritella
sp. PE36]
gi|149807700|gb|EDM67646.1| Cytochrome c biogenesis protein, transmembrane region [Moritella
sp. PE36]
Length = 625
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 11/176 (6%)
Query: 132 SLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYG- 190
+ +PC L ++P+ IG GSG + + S+A+ LG+A++ AL+GV + G+
Sbjct: 214 AFTPCVLPMIPILSSIIGGQGSGMTGWKGFYISVAYVLGMASSYALIGVLMATVGQGVNI 273
Query: 191 ---QIGTGLPLAASGLAIVMGLNLLEIIELQLPSF----FDNFDPRAAAANFPSSVQAYL 243
T L + SGL +++ L + + ELQLPS +N R ++ ++
Sbjct: 274 QAAMQQTWLLVIFSGLFVLLALAMFGVYELQLPSRLQVALNNQSQRLTGGK---TITVFM 330
Query: 244 AGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
G AL SPC + LA L YV+T++D L GG +L G PL++ + G
Sbjct: 331 MGAISALVVSPCVSAPLAGALLYVSTTQDWLFGGGVLFVMALGMGVPLVIIGTSGG 386
>gi|160879991|ref|YP_001558959.1| cytochrome c biogenesis protein transmembrane region [Clostridium
phytofermentans ISDg]
gi|160428657|gb|ABX42220.1| cytochrome c biogenesis protein transmembrane region [Clostridium
phytofermentans ISDg]
Length = 409
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 91/207 (43%), Gaps = 27/207 (13%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAF------------------------ 151
+ + ++F G+++ LSPC + +LP+ L +
Sbjct: 1 MEHINFIIVFLEGVLSFLSPCVIPILPIYLAILSNSRNDRNRNRDMKSVTINNENHTVKQ 60
Query: 152 GSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNL 211
S ++ ++ +++ F G++TT LLG G + + G +MGL
Sbjct: 61 DSRANKRVLLTNTLLFVFGISTTFFLLGTGIGIFRTFLTEYKRYFLIVGGGFIFLMGL-- 118
Query: 212 LEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSK 271
+ ++++P F N + + AYL G TF+ +PC P+LA++L +T +
Sbjct: 119 FYVGDIKIP-FLQKEKRIQLKTNQMNPIIAYLLGFTFSFGWTPCIGPMLASVLVLASTKQ 177
Query: 272 DPLIGGTLLLSYTTGYVAPLLLAASFA 298
D G L+ YT G++ P L+ A+F+
Sbjct: 178 DIWTGNLLIGIYTLGFIIPFLIVAAFS 204
>gi|392941166|ref|ZP_10306810.1| cytochrome c biogenesis protein [Thermoanaerobacter siderophilus
SR4]
gi|392292916|gb|EIW01360.1| cytochrome c biogenesis protein [Thermoanaerobacter siderophilus
SR4]
Length = 218
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 24/219 (10%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASF 184
F AG+V+ LSPC L ++P + YI FG+ K+ + + I F LG + L+G AS
Sbjct: 7 FLAGIVSFLSPCVLPLIPAYVSYI--FGNKKNN---LINLILFVLGFSIVFVLMGATASQ 61
Query: 185 AGK---AYGQIGTGLPLAASGLAIVM-GLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
GK AY I SG+ IV+ GL + I P F + N
Sbjct: 62 LGKLFLAYKDIFR----KVSGIIIVLFGLQMTGIFR---PLFLNK---EVKLINMEKVQT 111
Query: 241 AYLA----GLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
Y+ G+TFA +PC P+LA++L Y + +G LL +Y+ G P ++ A
Sbjct: 112 GYIGSLVLGITFAAGWTPCVGPILASILLYAGSVSTLSVGVILLFAYSMGLGIPFIVTAL 171
Query: 297 FAGALQSLLS-FRKFSSWINPMSGALLLGGGLYTFLDRL 334
+S+ K +I +SG +L+ G+ + + L
Sbjct: 172 LIDKFKSMYKRINKILPYIEVISGVILIIFGVLLYFNML 210
>gi|260577100|ref|ZP_05845078.1| cytochrome c biogenesis protein transmembrane region [Rhodobacter
sp. SW2]
gi|259020678|gb|EEW23996.1| cytochrome c biogenesis protein transmembrane region [Rhodobacter
sp. SW2]
Length = 249
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 84/171 (49%), Gaps = 10/171 (5%)
Query: 133 LSPCTLSVLPLTLGYIGAFGSGK-----SRAQIIGDSIAFSLGLATTLALLGVGASFAGK 187
LSPC L ++P L Y+G G+ +R +++ ++ F LGL+T LG AS G
Sbjct: 27 LSPCVLPIVPPYLAYMGGISMGEMTGTTARRRVLLPALFFVLGLSTVFLFLGFTASAFGA 86
Query: 188 AYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLT 247
+ Q A+ + I+ GL+ L + + + D A S++ AY+ GL
Sbjct: 87 FFLQNQEIFAKASGAVVIIFGLHFLGVFRIPI---LDREARMDAGDRGGSALGAYVLGLA 143
Query: 248 FALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPLLLAASF 297
FA +PC P L +L +A S+ L GTLLL+ Y G P LLAA F
Sbjct: 144 FAFGWTPCIGPQLGAILS-LAASEASLTRGTLLLAVYAAGLGLPFLLAALF 193
>gi|125974449|ref|YP_001038359.1| cytochrome c biogenesis protein, transmembrane region [Clostridium
thermocellum ATCC 27405]
gi|256005197|ref|ZP_05430165.1| cytochrome c biogenesis protein transmembrane region [Clostridium
thermocellum DSM 2360]
gi|281418975|ref|ZP_06249993.1| cytochrome c biogenesis protein transmembrane region [Clostridium
thermocellum JW20]
gi|385779906|ref|YP_005689071.1| cytochrome c biogenesis protein transmembrane region [Clostridium
thermocellum DSM 1313]
gi|419722056|ref|ZP_14249206.1| cytochrome c biogenesis protein transmembrane region [Clostridium
thermocellum AD2]
gi|419726098|ref|ZP_14253122.1| cytochrome c biogenesis protein transmembrane region [Clostridium
thermocellum YS]
gi|125714674|gb|ABN53166.1| cytochrome c biogenesis protein transmembrane region [Clostridium
thermocellum ATCC 27405]
gi|255990851|gb|EEU00965.1| cytochrome c biogenesis protein transmembrane region [Clostridium
thermocellum DSM 2360]
gi|281407432|gb|EFB37692.1| cytochrome c biogenesis protein transmembrane region [Clostridium
thermocellum JW20]
gi|316941586|gb|ADU75620.1| cytochrome c biogenesis protein transmembrane region [Clostridium
thermocellum DSM 1313]
gi|380770494|gb|EIC04390.1| cytochrome c biogenesis protein transmembrane region [Clostridium
thermocellum YS]
gi|380781907|gb|EIC11555.1| cytochrome c biogenesis protein transmembrane region [Clostridium
thermocellum AD2]
Length = 222
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 8/190 (4%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGS-----GKSRAQIIGDSIAFSLGLATTLALLG 179
F G++T +SPC +LP Y+ F GK++ +++ +S+ F LG LLG
Sbjct: 10 FAEGILTFVSPCIFPMLPAYFSYLAGFSDKEDKDGKNKRRLLINSLGFVLGFTIVFTLLG 69
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
A+ G + L + + + I+ GLN + I+ + + F+ +A + F SV
Sbjct: 70 AAATSLGAFLKEHRDVLKIISGIVIIIFGLNFIGILNIGFLNREKRFEYKADSLKFVGSV 129
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
+ G FA +PC + LA++L A S G LL+ Y+ G P +++A
Sbjct: 130 ---IFGFCFAFGWTPCISYFLASILALAANSSTMPEGLMLLVVYSLGLGIPFIVSAMIFE 186
Query: 300 ALQSLLSFRK 309
+++ +F K
Sbjct: 187 SIREAFNFIK 196
>gi|407476948|ref|YP_006790825.1| cytochrome c biogenesis protein transmembrane region
[Exiguobacterium antarcticum B7]
gi|407061027|gb|AFS70217.1| cytochrome c biogenesis protein transmembrane region
[Exiguobacterium antarcticum B7]
Length = 232
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 103/221 (46%), Gaps = 14/221 (6%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFG------SGKSRAQIIGDSIAFSLGLAT 173
SL + FGAG+++ +SPCTL + P+ L YI G + + ++AF +G A
Sbjct: 4 SLWLAFGAGVLSFVSPCTLPLYPVFLSYITGVSVTDLKEKGVREKRSLLHTLAFLVGFAM 63
Query: 174 TLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAA 233
A+LG+ S + L + + + V G+ LL + + P+F
Sbjct: 64 VFAVLGLSTSLLADVFITYRDTLRMIGALVIFVFGVVLLGLWQ---PTFCRREKKLDLGE 120
Query: 234 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
+ L G+ FA +PC+ P+LA ++ AT +P G +L Y G+ P LL
Sbjct: 121 RKGGYIGTVLVGIGFAAGWTPCTGPILAGVIALAAT--NPSQGMLYMLFYVLGFSIPFLL 178
Query: 294 AASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
A F G +S L F ++S + GAL++ G+ + D L
Sbjct: 179 MAFFVG--RSRL-FVQYSLKMTKFGGALMMVFGIVLYFDGL 216
>gi|256545976|ref|ZP_05473330.1| cytochrome c-type biogenesis protein CcdA [Anaerococcus vaginalis
ATCC 51170]
gi|256398270|gb|EEU11893.1| cytochrome c-type biogenesis protein CcdA [Anaerococcus vaginalis
ATCC 51170]
Length = 238
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 108/227 (47%), Gaps = 21/227 (9%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYI-------GAFGSGKSRAQI--IGDSIAFSLGL 171
L+ +F AG ++ +PCT S++P +G I F GK I I ++ F LGL
Sbjct: 8 LSSVFIAGFLSFFAPCTFSLMPAYIGIITDQRGEYKNFKFGKIYINIGAIIKTMTFILGL 67
Query: 172 ATTLALLGVGASFAGKAYGQIGTGLPLAASGLAI-VMGLNLLEIIELQLPSFFD--NFDP 228
AT+ +LG GA + + GL + ++GL+ +EII ++ + NF
Sbjct: 68 ATSFVILGFGAG---FFGKFVNNRWVIFIGGLIVFLLGLHQMEIINIERLNVTKTVNFKN 124
Query: 229 RAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYV 288
+ A + YL GL+F+L +PC P+L +L A+S G ++L Y+ G +
Sbjct: 125 KKTKA-----LGTYLMGLSFSLGWTPCVGPILGAVLLTSASSGKEFYGAFMMLVYSFGLM 179
Query: 289 APLLLAASFAGALQSLLS-FRKFSSWINPMSGALLLGGGLYTFLDRL 334
P LL A + L FRK ++ + G L++ G+ ++L
Sbjct: 180 VPFLLMAVLSSTLNKNFDFFRKHLIFMKRLGGFLIMVMGVVLMTNQL 226
>gi|399992541|ref|YP_006572781.1| cytochrome C biogenesis protein, transmembrane region [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
gi|400754223|ref|YP_006562591.1| cytochrome C biogenesis protein, transmembrane region [Phaeobacter
gallaeciensis 2.10]
gi|398653376|gb|AFO87346.1| cytochrome C biogenesis protein, transmembrane region [Phaeobacter
gallaeciensis 2.10]
gi|398657096|gb|AFO91062.1| cytochrome C biogenesis protein, transmembrane region [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 250
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 127 AGLVTSLSPCTLSVLPLTLGY-----IGAF-GSGKSRAQIIGDSIAFSLGLATTLALLGV 180
AGLV+ LSPC L ++P L Y IG G+ ++R + I ++ F +GL+T LLG
Sbjct: 21 AGLVSFLSPCVLPIVPPYLAYMSGVSIGEIQGTARARRKAIVAALFFIMGLSTVFLLLGF 80
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
AS G Q + + IV GL+ L + + L D + S+V
Sbjct: 81 TASAFGAFVLQNQELFAQVSGVVVIVFGLHFLSVFRIPL---LDREARMETDQSGGSAVG 137
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
AY+ GL FA +PC P L +L AT G LL Y G P LLAA F
Sbjct: 138 AYILGLAFAFGWTPCIGPQLGAILSLAATEASVTRGTLLLGIYALGLGVPFLLAAIF 194
>gi|297182662|gb|ADI18820.1| cytochrome c biogenesis protein [uncultured SAR11 cluster bacterium
HF4000_37C10]
Length = 238
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 100/219 (45%), Gaps = 18/219 (8%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSG--------KSRAQIIGDSIAFSLG 170
T+L++ F AGL++ LSPC VLPL GYI ++ SG K + ++ +I F+LG
Sbjct: 3 TTLSIAFLAGLISFLSPC---VLPLIPGYI-SYISGTSFDKLVEKKKNLVVIKTIFFTLG 58
Query: 171 LATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRA 230
+ LG ASF GK + + A + I L L+ II + F N D R
Sbjct: 59 FSFVFIALGSTASFIGKLFLTNSDIFRIIAGLIIIFFSLQLIGIINFK----FMNKDIRI 114
Query: 231 AAANFPSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVA 289
+ ++ L G F +PC P+L ++L A + LL SY+ G
Sbjct: 115 YTDQYSHNLAFPVLVGAAFGFGWTPCIGPILGSILTLAAIETNISKSIFLLSSYSLGLAI 174
Query: 290 PLLLAASFAGALQSL-LSFRKFSSWINPMSGALLLGGGL 327
P +++ +FRK+ S I + G +LL G+
Sbjct: 175 PFIISGILIDKFLFFSKNFRKYISTITKIGGTILLLTGI 213
>gi|416119388|ref|ZP_11594908.1| Cytochrome c-type biogenesis protein DsbD2C [Campylobacter concisus
UNSWCD]
gi|384576942|gb|EIF06252.1| Cytochrome c-type biogenesis protein DsbD2C [Campylobacter concisus
UNSWCD]
Length = 577
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 8/201 (3%)
Query: 106 NEAVLGQLSALSF-TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDS 164
++ + +LS+ +F SLA FG GL+ SL+PC ++P+ I + G + + S
Sbjct: 159 DQNIANELSSKNFFISLATFFGYGLLLSLTPCVFPMIPILSSIIVSKGGSLNAKKGFLLS 218
Query: 165 IAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASG----LAIVMGLNLLEIIELQLP 220
+ + + ++ AL GVGAS G +G G + G + +++ ++ +++LP
Sbjct: 219 LVYVVAMSLAYALAGVGASLLG--FGIAGALQNIYVLGAFATIFVILSFSMFGFYDIKLP 276
Query: 221 SFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLL 280
S F+N + + N + ++ G AL SPC LA L Y+A S D + GG +L
Sbjct: 277 SKFENLISK-KSQNSSGLIGVFIMGFASALIVSPCVAAPLAGALLYIAQSGDAIYGGIML 335
Query: 281 LSYTTGYVAPLLLAASFAGAL 301
G APLL+ +G L
Sbjct: 336 FVMGLGMGAPLLVIGLSSGKL 356
>gi|420481844|ref|ZP_14980481.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-2]
gi|420512267|ref|ZP_15010750.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-2b]
gi|393099078|gb|EJB99659.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-2]
gi|393157330|gb|EJC57591.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-2b]
Length = 239
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLILMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S RK++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLRKYNRAIEIVSGLVLILMGI 223
>gi|299132697|ref|ZP_07025892.1| cytochrome c biogenesis protein transmembrane region [Afipia sp.
1NLS2]
gi|298592834|gb|EFI53034.1| cytochrome c biogenesis protein transmembrane region [Afipia sp.
1NLS2]
Length = 241
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 109/226 (48%), Gaps = 13/226 (5%)
Query: 112 QLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD---SIAFS 168
++AL+ ++A+ AGLV ++P + ++ + G+ G+ +S ++ G SI F
Sbjct: 10 DIAALTPFTVALAMLAGLVVGVAPSSFPLISVATGFAAGQGATESGSRHFGGLRLSIGFV 69
Query: 169 LGLATTLALLGVGASFAGKAYGQIGTGLPLAASG----LAIVMGLNLLEIIELQLPSFFD 224
LG+AT A+LG G A ++ A + IV+GL LL + + +P+
Sbjct: 70 LGIATVDAVLGALFGLFGFAVLRVLASYLALAYLLLAVIMIVVGLALLRFVHIVIPTLAP 129
Query: 225 NFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYT 284
+ P + V +YL G+ F L+ P TP+L + A + DPL+G L+ ++
Sbjct: 130 SSKPTH------NLVGSYLLGIPFGLSTCPGCTPLLLPVAAAAAGTADPLLGAALMGAFG 183
Query: 285 TGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTF 330
P+++ A+ AG L S +F+ W + AL+ LY F
Sbjct: 184 LARGIPIIVVATMAGRLASFRHTHRFTLWAERIGAALMFVSALYFF 229
>gi|387926927|ref|ZP_10129606.1| cytochrome c biogenesis protein transmembrane region [Bacillus
methanolicus PB1]
gi|387589071|gb|EIJ81391.1| cytochrome c biogenesis protein transmembrane region [Bacillus
methanolicus PB1]
Length = 235
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 17/217 (7%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ-------IIGDSIAFSLGLATTLALL 178
GAG ++ +SPC L + P L YI G+ + + + +I F LG + +
Sbjct: 11 GAGFLSFISPCCLPLYPAFLSYITGMSVGEIKTENAMLQRRSLLHTICFLLGFSVIFIAI 70
Query: 179 GVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSS 238
G SF G+ + + + + GL ++ I++ P F D R N PS
Sbjct: 71 GYTTSFIGQFFADYKDLIRQIGAIFIVFFGLVIVGILK---PEFMMK-DRRFEFKNRPSG 126
Query: 239 -VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
+ + G+ FA +PC+ P+L ++ A+ +P G +++YT G+ P + + F
Sbjct: 127 YIGSAFIGMAFAAGWTPCTGPILMSVFALAAS--NPGSGMLYMIAYTLGFAIPFFVLSFF 184
Query: 298 AGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
G LQ + +K + I + G +++ G+ F D +
Sbjct: 185 IGKLQWI---KKHNVKIMKVGGYIMIVMGIVLFFDWM 218
>gi|311030189|ref|ZP_07708279.1| cytochrome c-type biogenesis protein CcdA [Bacillus sp. m3-13]
Length = 236
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 14/190 (7%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQI-------IGDSIAFSLGLA 172
+L + FGAG+++ +SPCTL + P L YI G+ + + I ++ F +G +
Sbjct: 6 TLFLAFGAGVLSFISPCTLPIYPAFLSYITGVSVGELKEEKGMLQKRSILHTLFFLVGFS 65
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
LG +F G+ + Q + + L I GL +L + + P F D + A
Sbjct: 66 LIFIALGFSTTFLGRFFLQYQDLIRQVGAILIIFFGLVILGVFQ---PKFLMQ-DKKFAF 121
Query: 233 ANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
N PS + L G+ FA +PCS P+L ++ + +P G +L+Y G+ P
Sbjct: 122 KNRPSGYIGTVLIGMAFAAGWTPCSGPILGAVIA--MSINNPSSGMYYMLAYVLGFAIPF 179
Query: 292 LLAASFAGAL 301
+ + F G +
Sbjct: 180 FILSFFIGKM 189
>gi|242310442|ref|ZP_04809597.1| cytochrome c biogenesis protein [Helicobacter pullorum MIT 98-5489]
gi|239522840|gb|EEQ62706.1| cytochrome c biogenesis protein [Helicobacter pullorum MIT 98-5489]
Length = 244
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 13/190 (6%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFG----------SGKSRAQIIGDSIAFSLG 170
L + F AG++T +SPC L ++P L YI + R I+ +++ F LG
Sbjct: 9 LGISFLAGILTFISPCVLPLIPAYLSYISEVSLSELKAYHTLDRRMRFVIVRNALFFVLG 68
Query: 171 LATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRA 230
+ LLGV A+ + + A G+ I+ GL+ ++IE+ ++ N
Sbjct: 69 MGIVFVLLGVVAARILSGGILLSPYVAYFAGGILIIFGLHTAKVIEIPFLNYQKNAKFNV 128
Query: 231 AAANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVA 289
+F +L G++F+L +PC P+LA ++ + D G L++ YT G+
Sbjct: 129 VHFSFLRDFFMPFLLGVSFSLGWTPCIGPILAGIISLASLRADE--GIILMIVYTLGFSL 186
Query: 290 PLLLAASFAG 299
P LL A G
Sbjct: 187 PFLLCAFLVG 196
>gi|421074394|ref|ZP_15535427.1| cytochrome c biogenesis protein transmembrane region [Pelosinus
fermentans JBW45]
gi|392527531|gb|EIW50624.1| cytochrome c biogenesis protein transmembrane region [Pelosinus
fermentans JBW45]
Length = 241
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSL-------GLATTLAL 177
F AG+++ LSPC L +LP + ++ S K + F L GL+ +
Sbjct: 12 FIAGIISFLSPCILPLLPTYMAFLTGAESEKIHDNKPVSTWPFLLRISCFLSGLSLVFIM 71
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN-FP 236
+G AS+ G+ + + + ++MG++LL I++L+ + + R N F
Sbjct: 72 MGATASYFGQLFLDYQDAIRQIGAIFMVIMGIHLLGIVKLE----WLEREYRPLLQNTFQ 127
Query: 237 SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
+ A++ G+ F +PC+ P+LA++L Y +T+ G LL Y+ G+ P LL A
Sbjct: 128 GPIGAFILGVAFTAGWTPCTGPILASILVYASTTITLSQGAFLLFIYSLGFSVPFLLMAL 187
Query: 297 FAGALQSLLSFRKFSSWINPMSG 319
F L + W+ + G
Sbjct: 188 FFK--NYLFRIKIVMKWLPYLQG 208
>gi|403739706|ref|ZP_10952042.1| cytochrome c-type biogenesis protein CcdA [Austwickia chelonae NBRC
105200]
gi|403190449|dbj|GAB78812.1| cytochrome c-type biogenesis protein CcdA [Austwickia chelonae NBRC
105200]
Length = 234
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 7/202 (3%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYI--GAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASF 184
AG+V+ +SPC L ++P+ +GY+ G G SR + + AF G + L
Sbjct: 12 AGIVSFVSPCFLPIVPVYVGYMVGGQDGQPTSRRATLLQACAFVGGFSAVFITLWASIGL 71
Query: 185 AGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAA--AANFPSSVQAY 242
G A L +A + IVMGL++ +IEL + + P A A P+ ++
Sbjct: 72 VGYALSDYRDLLRIAGGAVLIVMGLHVAGLIELSV--LYRTTRPIGAPGAGGRPTLRRSG 129
Query: 243 LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGAL- 301
L GL F +PC P+L ++G + S G LL++Y G P +L A A AL
Sbjct: 130 LLGLAFGAGWTPCIGPILGGVIGLASVSSTVGEGALLLVAYCLGLGLPFVLVAMGADALH 189
Query: 302 QSLLSFRKFSSWINPMSGALLL 323
+ + + R+ ++ I SGA L+
Sbjct: 190 RRMTALRRHTTAIALTSGAFLI 211
>gi|118594158|ref|ZP_01551505.1| Protein-disulfide reductase [Methylophilales bacterium HTCC2181]
gi|118439936|gb|EAV46563.1| Protein-disulfide reductase [Methylophilales bacterium HTCC2181]
Length = 564
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 92/189 (48%), Gaps = 23/189 (12%)
Query: 113 LSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLA 172
L ALSF F +G + SL+PC L ++P+ G I A SGK++AQ++ ++A+ LG+
Sbjct: 166 LVALSF------FISGALLSLTPCALPMVPILSGIIIA--SGKNKAQVL--TLAYVLGVC 215
Query: 173 TTLALLGVGASFAGKAYGQ--IGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRA 230
T LG+ A G T +S + +V L +L+II + +P P
Sbjct: 216 FTYTSLGLIAGLTGTLISSSIQNTNFLYFSSVMFLVFALMMLDIIRVNIP-----LAPNN 270
Query: 231 AAANFPSSVQ------AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYT 284
++F +L GL AL SPC P LA + ++ S D ++GG LLS
Sbjct: 271 TISSFTQRFMGGGITSVFLMGLFSALVLSPCVAPPLAAAILFIGQSGDMIVGGVSLLSMA 330
Query: 285 TGYVAPLLL 293
G PLLL
Sbjct: 331 LGMSLPLLL 339
>gi|386750697|ref|YP_006223917.1| cytochrome c biogenesis protein [Helicobacter pylori Shi417]
gi|384556955|gb|AFH97423.1| cytochrome c biogenesis protein [Helicobacter pylori Shi417]
Length = 239
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + L A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWLNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVVGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|121601918|ref|YP_989050.1| putative cytochrome c-type biogenesis protein [Bartonella
bacilliformis KC583]
gi|421760857|ref|ZP_16197668.1| cytochrome c-type biogenesis protein [Bartonella bacilliformis INS]
gi|120614095|gb|ABM44696.1| putative cytochrome c-type biogenesis protein [Bartonella
bacilliformis KC583]
gi|411174088|gb|EKS44124.1| cytochrome c-type biogenesis protein [Bartonella bacilliformis INS]
Length = 250
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ-----------IIGDSIAFS 168
S+ +F AG ++ LSPC L ++P L Y+ R++ ++ SIAF
Sbjct: 6 SIFSVFFAGALSFLSPCVLPLVPPYLCYMAGVSIDDFRSENRSEKVSVRLALLFSSIAFI 65
Query: 169 LGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
G T LG AS GK G L + + + I+ GLN L I+++ F + +
Sbjct: 66 FGFTTVFVALGASASTIGKFIGYYRDWLVIFSGIIIIIFGLNFLGILKIN----FLSREV 121
Query: 229 RAAAANFPS-SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGY 287
R P+ + +Y+ GL FA +PC P+L ++ T + G LL Y+ G
Sbjct: 122 RIQMRKIPTGPLGSYIIGLAFAFGWTPCIGPILGPVITLAGTKETVGEGAMLLGIYSLGL 181
Query: 288 VAPLLLAASFAGALQSLL-SFR 308
P +LAA F+G L SFR
Sbjct: 182 AVPFVLAAFFSGIFMRFLESFR 203
>gi|110634122|ref|YP_674330.1| cytochrome c biogenesis protein, transmembrane region
[Chelativorans sp. BNC1]
gi|110285106|gb|ABG63165.1| cytochrome c biogenesis protein, transmembrane region
[Chelativorans sp. BNC1]
Length = 245
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 113/237 (47%), Gaps = 31/237 (13%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAF---------GSGKSRAQIIGDSIAFSLGLATTL 175
F AG ++ LSPC L ++P L Y+ G+ +R ++ ++ F LG +T
Sbjct: 11 FAAGALSFLSPCVLPLVPPYLCYMAGVTVEDFRRPEGAAAARLPLLAAALTFVLGFSTVF 70
Query: 176 ALLGVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
LG GAS G +A+ Q L +AA + I+MGLN L I+ + L S A
Sbjct: 71 VALGAGASTIGGFLRAWQQ---ELAIAAGIVIILMGLNFLGILRIPLLSREARLHMEAKP 127
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPL 291
AN + AYL GL FA +PC PVL +L +A ++ + G L+L+ Y+ G P
Sbjct: 128 ANIGA---AYLMGLAFAFGWTPCIGPVLGPIL-TLAGGRETVGEGALMLAVYSAGLGIPF 183
Query: 292 LLAASFAGALQSLLS-FRKFSSWINP-------MSGALLLGGGLYT---FLDRLFPT 337
++AA F+ A L FR + ++G L L GG+ +L FPT
Sbjct: 184 IVAALFSDAFMRFLQRFRMHLGRVEKAIGGLLVLAGVLFLTGGMQNMAFWLLETFPT 240
>gi|386753821|ref|YP_006227039.1| cytochrome c biogenesis protein [Helicobacter pylori Shi112]
gi|384560079|gb|AFI00546.1| cytochrome c biogenesis protein [Helicobacter pylori Shi112]
Length = 239
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 12/208 (5%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
G S A + + + A G+ I+ GL+ L + +F A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAFLYKTQSFR-LASKSNSMQRFY 137
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFAG 299
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 138 PFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVVGLAIPFLLVALMLER 195
Query: 300 ALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 196 ALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|340624277|ref|YP_004742730.1| hypothetical protein GYY_05610 [Methanococcus maripaludis X1]
gi|339904545|gb|AEK19987.1| hypothetical protein GYY_05610 [Methanococcus maripaludis X1]
Length = 217
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 101/207 (48%), Gaps = 17/207 (8%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
L +IF AG+ T+L PC ++VLP L Y FG SR + S +F +G + + LG
Sbjct: 2 DLFLIFLAGISTALGPCIVTVLPFVLAY--TFGISNSRFEGFLVSFSFMVGFSIVFSTLG 59
Query: 180 VGASFAGKAYGQIG--TGLPLAASGLAIVMGLNLL--EIIELQLPSFFDNFDPRAAAAN- 234
V +S A+G T L A AI+ G+ +L + + F F + + N
Sbjct: 60 VLSS----AFGIFLNLTLLKYIAGIFAIIFGILVLFNKNFTFRKEGVFQKFSKKLSKMNN 115
Query: 235 --FPSSV-QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
P + + + G+ + A+ C+ P+LA +L +VA+ D G LL+Y+ GY P+
Sbjct: 116 ISLPVKILNSIVLGIVYGFGANICADPILAGILTFVASKADVYYGFFALLTYSLGYGIPI 175
Query: 292 LLAASFAGALQSLLS---FRKFSSWIN 315
+ ++ + ++ +KF ++I+
Sbjct: 176 IFLSTLGAESKQIVEKIVKKKFITYIS 202
>gi|312135623|ref|YP_004002961.1| cytochrome c biogenesis protein transmembrane region
[Caldicellulosiruptor owensensis OL]
gi|311775674|gb|ADQ05161.1| cytochrome c biogenesis protein transmembrane region
[Caldicellulosiruptor owensensis OL]
Length = 215
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 104/210 (49%), Gaps = 11/210 (5%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAG 186
AG ++ SPC L ++P+ + Y+ F SR + +S+ F LG + +LGV A+ G
Sbjct: 11 AGFMSFFSPCILPLIPVYVLYL--FSQKGSRLK---NSLLFVLGFSIVFVVLGVVAAAVG 65
Query: 187 KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDN-FDPRAAAANFPSSVQAYLAG 245
+ L A+ + ++MGL +L++ P+F F P N + + G
Sbjct: 66 SVFSGYSFLLKKIAAIVIVLMGLVMLDLS----PNFLKKIFIPIQGKGNLDINASPLILG 121
Query: 246 LTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLL 305
+ +++ +PC PVL ++L A S+ L G LL Y+ G+ P L+++ L++
Sbjct: 122 MVLSISWTPCVGPVLTSILSMAALSETFLKGAMLLFIYSMGFAVPFLISSFLIDRLKAFF 181
Query: 306 -SFRKFSSWINPMSGALLLGGGLYTFLDRL 334
++S + +GALL+ G+ F D++
Sbjct: 182 GMLNRYSRAVEYFTGALLIAFGMLAFFDKI 211
>gi|319939158|ref|ZP_08013522.1| hypothetical protein HMPREF9459_00510 [Streptococcus anginosus
1_2_62CV]
gi|418962635|ref|ZP_13514489.1| cytochrome C biogenesis protein transmembrane region [Streptococcus
anginosus subsp. whileyi CCUG 39159]
gi|421491084|ref|ZP_15938451.1| cytochrome C biogenesis protein transmembrane region [Streptococcus
anginosus SK1138]
gi|319812208|gb|EFW08474.1| hypothetical protein HMPREF9459_00510 [Streptococcus anginosus
1_2_62CV]
gi|383345170|gb|EID23303.1| cytochrome C biogenesis protein transmembrane region [Streptococcus
anginosus subsp. whileyi CCUG 39159]
gi|400372081|gb|EJP25030.1| cytochrome C biogenesis protein transmembrane region [Streptococcus
anginosus SK1138]
Length = 236
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGY---------IGAFGSGKSRAQIIGDSIA 166
+S L +F AG+++ SPC L +LP+ +G I FG + II ++
Sbjct: 2 ISIVFLISVFLAGILSFFSPCILPLLPVYVGILLDTDEPRTITIFGKKIAWYGII-KTLF 60
Query: 167 FSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNF 226
F GL+ +LG GA F GK L A + I++G++ +E+I +L +
Sbjct: 61 FIAGLSVVFLILGYGAGFLGKVLYTEWFRYVLGA--IVILLGVHQMELINFKLLQRQKSV 118
Query: 227 DPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLI-GGTLLLSYTT 285
+ N A+L G+TF+ +PC PVL+++L A+ + + GG L+L YT
Sbjct: 119 QLKKDK-NRNDFYNAFLLGVTFSFGWTPCVGPVLSSVLAIAASGGNGAVQGGFLMLVYTL 177
Query: 286 GYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGAL 321
G P L+ AL S + R F I P G L
Sbjct: 178 GLAIPFLIL-----ALASSIVLRHFGK-IKPYMGLL 207
>gi|15625030|gb|AAF99429.1| CcdA-like protein [Rhodovulum sulfidophilum]
Length = 245
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 96/200 (48%), Gaps = 24/200 (12%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRA----------QIIGDSIAFSLGLATTLA 176
AGL++ LSPC L ++P L Y+ + R +++ +IAF+LG+ +
Sbjct: 12 AGLLSFLSPCILPIVPFYLCYMAGISMTELRGSDRIPPGAVRRLVVSAIAFALGVTSIFV 71
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
LLG+GA+ G+ + + L A+ + + GL+ L I+ + L + RA P
Sbjct: 72 LLGMGATALGQGFREWKDELSYVAALMLFLFGLHFLGILRIPLLYREARIETRAE----P 127
Query: 237 SS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
S+ V AYL GL F +PC P LA +L + D GG LLL Y P +LAA
Sbjct: 128 STLVGAYLMGLAFGFGWTPCVGPALAAILMVASGMGDIGRGGLLLLVYGLAMTLPFVLAA 187
Query: 296 SFAGALQSLLSFRKFSSWIN 315
+FA R F +W+
Sbjct: 188 AFA---------RPFLAWMQ 198
>gi|374580638|ref|ZP_09653732.1| cytochrome c biogenesis protein [Desulfosporosinus youngiae DSM
17734]
gi|374416720|gb|EHQ89155.1| cytochrome c biogenesis protein [Desulfosporosinus youngiae DSM
17734]
Length = 221
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 6/206 (2%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGA 182
++F G++T +SPC L +LP+ + Y A G R + + ++I F LG ++G A
Sbjct: 5 LLFLEGIITFISPCLLPMLPIYVSYFAA-GEVNGR-KTLTNAIGFVLGFTIVFTIMGAFA 62
Query: 183 SFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAY 242
G+ T L + + IV GLN L I+++ F + P+ AA A
Sbjct: 63 GSMGRLIRDYTTILNIGTGLIVIVFGLNFLGILKI---GFLNRISPKNAAVKNLGFFSAM 119
Query: 243 LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQ 302
+ GL F+++ +PC L + L + L G +LL+++ G P + +A L+
Sbjct: 120 VLGLVFSISWTPCVGAFLGSALLMASLEGSSLQGIFMLLTFSLGLGIPFVASALLIDQLK 179
Query: 303 SLLSF-RKFSSWINPMSGALLLGGGL 327
F ++ IN +SG LL+ GL
Sbjct: 180 GAFDFIKRNYRIINFLSGGLLIVVGL 205
>gi|52549100|gb|AAU82949.1| cytochrome c-type biogenesis protein [uncultured archaeon
GZfos23H9]
Length = 216
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASF 184
F G+++ LSPC L V+PL Y + SGK I +GL T+ L+GV AS
Sbjct: 11 FAFGILSVLSPCVLPVIPLIAAY--STKSGKYM------PITIVIGLTTSFTLMGVLASA 62
Query: 185 AGKAYGQIGTGLPLAASGLAIVMGLNLL-EIIELQLPSFFDN--FDPRAAAANFPSSVQA 241
G + Q T L + I +GL ++ ++IE + + P+ + N S+
Sbjct: 63 FGSVFQQYQTMLYTIGGVVIIFLGLCMIFDVIEQNIRRIIPSTGLSPKFSMTNAGSTAGG 122
Query: 242 YLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGAL 301
+ G + + PC P+L +L VA + L G LL Y+ G P LLA ++
Sbjct: 123 LMFGFSLGIIWIPCVGPILGAILAIVAVEGNILYGAILLAIYSLGLGIP-LLAIAYTSRF 181
Query: 302 QSLLSFRKFSSWINPMSGALLLGGGLYTFL 331
+L K+S I +SG +L+ GLY L
Sbjct: 182 -TLKPLNKYSVIIKRISGVILVLIGLYMLL 210
>gi|358068809|ref|ZP_09155257.1| hypothetical protein HMPREF9333_02141 [Johnsonella ignava ATCC
51276]
gi|356692989|gb|EHI54682.1| hypothetical protein HMPREF9333_02141 [Johnsonella ignava ATCC
51276]
Length = 238
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 113/236 (47%), Gaps = 27/236 (11%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIG----------DSIAFSLG 170
++ +F AG + PCT V+P+ LG + G+ + +G + F LG
Sbjct: 9 ISTVFIAGFASFFLPCTFPVIPVYLGILTD-ADGEYKKLKLGRLTLNTGAILKTATFVLG 67
Query: 171 LATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRA 230
LA + LG+GA F GK L + A + IV+G++ +++I ++ D+
Sbjct: 68 LAASFVALGIGAGFLGKLLTN--RWLYVIAGLIIIVLGIHQMDLIHIKK---LDDISGVK 122
Query: 231 AAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAP 290
+ ++ +L G++F++ +PC P+L ++ +T L G L+L YT G + P
Sbjct: 123 IQNDKAGALGTFLMGVSFSIGWTPCVGPILGAVITAASTQGTALYGAFLMLVYTLGLMVP 182
Query: 291 LLL---AASFAGA-----LQSLLSFRKFSSWINPMSGALLLG---GGLYTFLDRLF 335
++ A+ FA + +++++F++ + G +++ G + F +RLF
Sbjct: 183 FIIMVAASDFAMSKFDVLKKNIMTFKRIGGGFIVIMGVMVMFRQIGAITAFFERLF 238
>gi|345875242|ref|ZP_08827036.1| thiol:disulfide interchange protein DsbD [Neisseria weaveri LMG
5135]
gi|417958597|ref|ZP_12601511.1| thiol:disulfide interchange protein DsbD [Neisseria weaveri ATCC
51223]
gi|343966811|gb|EGV35064.1| thiol:disulfide interchange protein DsbD [Neisseria weaveri ATCC
51223]
gi|343969150|gb|EGV37367.1| thiol:disulfide interchange protein DsbD [Neisseria weaveri LMG
5135]
Length = 568
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 19/204 (9%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYI-GAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AGL S + C +LP+ G I G + KSRA I+ ++ + GLA T +
Sbjct: 159 NLLAFFLAGLGLSFTACMYPLLPIVSGIIIGDKNTSKSRAFIL--TLIYVQGLALTYTAV 216
Query: 179 GVGASFAGK---AYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
GV A G + Q + L+A+ + +++ L++ I LQLP S+F N +++
Sbjct: 217 GVIAGLTGSLLTVWLQ-QPWVVLSAAAVMVLLSLSMFGIFNLQLPVAIQSYFQN---QSS 272
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
N +V ++ G+ AL PC P LA LGY+ + D +GG L + G PL
Sbjct: 273 KLNGGKTVSVFVMGMLSALIVGPCVAPPLAFALGYIGQTGDAALGGLALYTLALGTGVPL 332
Query: 292 LLAASFAGALQSLLSFRKFSSWIN 315
+L +F G + + +W+N
Sbjct: 333 ILIGTFGGHI-----LPRAGTWMN 351
>gi|167037406|ref|YP_001664984.1| cytochrome c biogenesis protein, transmembrane region
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|167040074|ref|YP_001663059.1| cytochrome c biogenesis protein, transmembrane region
[Thermoanaerobacter sp. X514]
gi|256752835|ref|ZP_05493676.1| cytochrome c biogenesis protein transmembrane region
[Thermoanaerobacter ethanolicus CCSD1]
gi|300914157|ref|ZP_07131473.1| cytochrome c biogenesis protein transmembrane region
[Thermoanaerobacter sp. X561]
gi|307724607|ref|YP_003904358.1| cytochrome c biogenesis protein transmembrane subunit
[Thermoanaerobacter sp. X513]
gi|320115820|ref|YP_004185979.1| cytochrome c biogenesis protein transmembrane subunit
[Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166854314|gb|ABY92723.1| cytochrome c biogenesis protein, transmembrane region
[Thermoanaerobacter sp. X514]
gi|166856240|gb|ABY94648.1| cytochrome c biogenesis protein, transmembrane region
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|256748285|gb|EEU61348.1| cytochrome c biogenesis protein transmembrane region
[Thermoanaerobacter ethanolicus CCSD1]
gi|300889092|gb|EFK84238.1| cytochrome c biogenesis protein transmembrane region
[Thermoanaerobacter sp. X561]
gi|307581668|gb|ADN55067.1| cytochrome c biogenesis protein transmembrane region
[Thermoanaerobacter sp. X513]
gi|319928911|gb|ADV79596.1| cytochrome c biogenesis protein transmembrane region
[Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 218
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 24/219 (10%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASF 184
F AG+V+ LSPC L ++P + YI FG+ K+ + + + F LG + L+G AS
Sbjct: 7 FLAGIVSFLSPCVLPLIPAYVSYI--FGNKKNN---LINLLLFVLGFSIVFVLMGATASQ 61
Query: 185 AGK---AYGQIGTGLPLAASGLAIVM-GLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
GK AY I SG+ IV+ GL + I P F + N
Sbjct: 62 LGKLFLAYKDIFR----KVSGIIIVLFGLQMTGIFR---PIFLNK---EVKLINMEKVQT 111
Query: 241 AYLA----GLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
Y+ G+TFA +PC P+LA++L Y + +G LL +Y+ G P ++ A
Sbjct: 112 GYIGSLVLGITFAAGWTPCVGPILASILLYAGSVSTLSVGVILLFAYSMGLGIPFIITAL 171
Query: 297 FAGALQSLLS-FRKFSSWINPMSGALLLGGGLYTFLDRL 334
+S+ K +I +SG +L+ G+ + + L
Sbjct: 172 LIDKFKSMYKRINKILPYIEVISGVILIIFGVLLYFNML 210
>gi|414162025|ref|ZP_11418272.1| hypothetical protein HMPREF9697_00173 [Afipia felis ATCC 53690]
gi|410879805|gb|EKS27645.1| hypothetical protein HMPREF9697_00173 [Afipia felis ATCC 53690]
Length = 244
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 83/181 (45%), Gaps = 19/181 (10%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYI-GAF--------GSGKSRAQIIGDSIAFSLGLATTLAL 177
AGLV+ LSPC L ++P L Y+ GA SR ++ ++ F LG +T
Sbjct: 13 AGLVSFLSPCVLPLVPAYLVYLTGATVEHVASEEKPATSRRAVLLCALLFVLGFSTVFVG 72
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
LG A+ G A + L +AA + IVMGL+ L + + F R P
Sbjct: 73 LGASATVIGAALRRWSAELSIAAGVVIIVMGLHFLGLTRI-------GFLMREGRLPIPK 125
Query: 238 SVQ---AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
V AY+ GL FA +PC PVLA +L A+ G LL Y+ G P LLA
Sbjct: 126 PVGLWGAYVMGLAFAFGWTPCIGPVLAAILSIAASENTVQKGALLLAVYSAGLGIPFLLA 185
Query: 295 A 295
A
Sbjct: 186 A 186
>gi|373451307|ref|ZP_09543232.1| hypothetical protein HMPREF0984_00274 [Eubacterium sp. 3_1_31]
gi|371968579|gb|EHO86034.1| hypothetical protein HMPREF0984_00274 [Eubacterium sp. 3_1_31]
Length = 413
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 20/207 (9%)
Query: 114 SALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQI------IGDSIAF 167
+ S+ ++F G+++ LSPC L +LP+ +GY+ GS + QI I +++F
Sbjct: 6 DTMQHISILMVFMEGVLSFLSPCVLPLLPVYMGYL--IGSDVNNKQIRKKRFVIFFTLSF 63
Query: 168 SLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFD 227
G+ T + L+ + + + + L IV+GL QL F NF
Sbjct: 64 IFGIFTAILLMNISITLISSFFRDHMSVFIKVGGILIIVLGL-------FQLGFFKSNFL 116
Query: 228 PRAAAANFPSSVQ-----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS 282
+ F + A+L G TF+ A +PC P L+++L +S++ + L++
Sbjct: 117 GKTRRLPFTLKKEMNLLLAFLMGFTFSFAWTPCIGPALSSILLLANSSQNLWMSNFLMVI 176
Query: 283 YTTGYVAPLLLAASFAGALQSLLSFRK 309
Y G P LL F ++ + LS K
Sbjct: 177 YALGLTIPFLLIGIFTDSILNWLSNHK 203
>gi|403530634|ref|YP_006665163.1| cytochrome c-type biogenesis protein [Bartonella quintana RM-11]
gi|403232705|gb|AFR26448.1| cytochrome c-type biogenesis protein [Bartonella quintana RM-11]
Length = 262
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 85/194 (43%), Gaps = 16/194 (8%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ-----------IIGDSIAFSLGLA 172
+F AG ++ LSPC L ++P L Y+ G R++ ++ IAF LG
Sbjct: 10 VFFAGALSFLSPCVLPLVPPYLCYMAGIGIDDFRSEKHNEKVFIRLALLSSVIAFVLGFT 69
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
T LG AS GK L A + I+ GLN L ++++ F + R
Sbjct: 70 TVFVALGASASTIGKFIAYYREWFVLTAGIIIIIFGLNFLGLLKVA----FLFCEARFQT 125
Query: 233 ANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
P+ + AY+ GL FA +PC P+L ++ T + G LL Y G P
Sbjct: 126 HKTPAGPLGAYVIGLAFAFGWTPCIGPILGPVITLAGTKETVGEGAILLGVYALGLGVPF 185
Query: 292 LLAASFAGALQSLL 305
++AA F+ + L
Sbjct: 186 VIAALFSSSFMRFL 199
>gi|451942127|ref|YP_007462764.1| cytochrome c-type biogenesis protein [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
gi|451901514|gb|AGF75976.1| cytochrome c-type biogenesis protein [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
Length = 262
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 95/217 (43%), Gaps = 17/217 (7%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ-----------IIGDSIAFSLGLA 172
+F AG ++ LSPC L ++P L Y+ G R+Q ++ +AF LG
Sbjct: 10 VFFAGALSFLSPCVLPLVPPYLCYMAGIGIDDLRSQKHEGKVFIRRGLLSSILAFVLGFT 69
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
T LG AS GK G +AA I+ GLN L + ++ F + R
Sbjct: 70 TVFVALGASASTVGKFIGYYRDWFAIAAGITIIIFGLNFLGLFKIA----FLFREARFQT 125
Query: 233 ANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
P+ + AY+ GLTFA +PC P+L ++ T + G LL Y G P
Sbjct: 126 HKVPTGPLGAYVIGLTFAFGWTPCIGPILGPVITLAGTKETVGEGALLLGIYALGLGVPF 185
Query: 292 LLAASFAGALQSLL-SFRKFSSWINPMSGALLLGGGL 327
+LAA F+ L +FR + M G L+ G+
Sbjct: 186 VLAALFSSNFMRFLGAFRIHLGKVEKMIGIFLIITGI 222
>gi|297537257|ref|YP_003673026.1| cytochrome c biogenesis protein transmembrane region [Methylotenera
versatilis 301]
gi|297256604|gb|ADI28449.1| cytochrome c biogenesis protein transmembrane region [Methylotenera
versatilis 301]
Length = 643
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGK---SRAQIIGDSIAFSLGLATTLAL 177
+A F AGL+ SL+PC L ++P+ I S + S+ G S+A+ LG+A + L
Sbjct: 212 IAGFFAAGLLLSLTPCVLPMIPILSSIIVGSQSQQVKPSKLHAFGLSVAYVLGMALSYTL 271
Query: 178 LGVGASFAGKAYGQ-IGTGLPLAASGLA-IVMGLNLLEIIELQLPSFFD----NFDPRAA 231
G+ A +G Q + L AS L I++ ++ EL+LP F+ N +
Sbjct: 272 AGIAAGLSGDLLSQSLQNAWVLGASALIFILLAFSMFGFYELKLPQSFEDKMLNTSNKLK 331
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
+F ++ G AL SPC LA L Y+ + + +GG L + G PL
Sbjct: 332 GGHF---FGVFVMGALSALIVSPCVAAPLAGALIYIGQTHNVFLGGVGLFALAIGMGVPL 388
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
LL + AG+L K W+N + G L+LG ++
Sbjct: 389 LLIGASAGSL-----LPKTGDWMNAVRNFFGVLMLGMAIW 423
>gi|212211767|ref|YP_002302703.1| thiol:disulfide interchange protein [Coxiella burnetii CbuG_Q212]
gi|212010177|gb|ACJ17558.1| thiol:disulfide interchange protein [Coxiella burnetii CbuG_Q212]
Length = 631
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 104/234 (44%), Gaps = 21/234 (8%)
Query: 118 FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLAL 177
F L FG GL+ S +PC L ++P+ G I G K + G S+ + LG+A T A+
Sbjct: 221 FFVLLSFFGFGLLLSFTPCVLPMIPVLSGII--VGQQKYPKRAFGLSLMYVLGMAITYAI 278
Query: 178 LGVGASFAGKAYGQIGTGLPLAA---SGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
GV F G Q P S L I M L+L + +LQL + R A A+
Sbjct: 279 AGVIFGFIGSTV-QAAFQNPWLIGLFSLLFIAMALSLFGLYDLQL--LPQRWQTRLAQAS 335
Query: 235 FPSSVQAYLA----GLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAP 290
YL G L SPC TP L +LGY++ + + +GG L + G AP
Sbjct: 336 DRQKHGTYLGTALMGALSTLILSPCVTPALVGVLGYISHTGNASLGGVALFTMGLGMGAP 395
Query: 291 LLLAASFAGALQSLLSFRKFSSW---INPMSGALLLGGGLYTFLDRLFPTTMAM 341
LLL +F+ K W I + G L+L ++ L R+ P T+ M
Sbjct: 396 LLLLGAFSRKW-----LPKAGPWMTVIKHILGVLMLAVAVW-LLARILPGTVTM 443
>gi|167630639|ref|YP_001681138.1| cytochrome c assembly protein, ccda [Heliobacterium modesticaldum
Ice1]
gi|167593379|gb|ABZ85127.1| cytochrome c assembly protein, ccda [Heliobacterium modesticaldum
Ice1]
Length = 237
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 102/237 (43%), Gaps = 37/237 (15%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYI-GAF------GSGKSRAQIIGDSIAFSLGL 171
SL V F AG+ + LSPC L ++P + Y+ G+ G +IAF LG
Sbjct: 4 VSLTVAFLAGIASFLSPCVLPLVPAYVTYLTGSVVAELPQGEAAKPNNPFWRAIAFVLGF 63
Query: 172 ATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNF----D 227
+ LG A+ GK Q GL + A + ++ GL+L + L +P +
Sbjct: 64 SVVFIALGATATVIGKWLVQYQGGLRVTAGAIIVLFGLHLSGL--LPIPGLYREVRLGGK 121
Query: 228 PRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGY 287
P+ + A+L G+ FA SPC P+L+ + Y AT + G LL +Y+TG
Sbjct: 122 PKTGG-----WLGAFLLGMAFAAGWSPCVGPILSAIYIYAATGETLGQGLALLTAYSTGL 176
Query: 288 VAPLLLAASFAGALQSLLSFRKFSSWINPM----------SGALLLGGGLYTFLDRL 334
P L+ A LS +F W M SG +++ G+ DRL
Sbjct: 177 AIPFLVTA---------LSIARFDFWFRRMSRHLTKISMASGLIMVAVGILILTDRL 224
>gi|85715586|ref|ZP_01046566.1| Cytochrome c biogenesis protein, transmembrane region [Nitrobacter
sp. Nb-311A]
gi|85697525|gb|EAQ35402.1| Cytochrome c biogenesis protein, transmembrane region [Nitrobacter
sp. Nb-311A]
Length = 244
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 86/195 (44%), Gaps = 19/195 (9%)
Query: 127 AGLVTSLSPCTLSVLP--------LTLGYIGAFGSGK-SRAQIIGDSIAFSLGLATTLAL 177
AGLV+ LSPC L ++P T+ ++ S K S+ ++ ++ F G +T
Sbjct: 13 AGLVSFLSPCVLPLVPPYLIYLTGATIEHVSNDESPKASKRAVMLAALMFVFGFSTVFVA 72
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
LG ASF G L + A + IVMGL+ L + + F R P
Sbjct: 73 LGASASFVGSLIRAWSAQLSIVAGIVIIVMGLHFLGLTRI-------GFLMREGRLTAPK 125
Query: 238 SVQ---AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
V AY+ GL FA +PC P+LA +L A + G LL Y+ G P LLA
Sbjct: 126 PVGLWGAYVMGLAFAFGWTPCIGPILAAILSVAAAEATVVKGAGLLAVYSAGLGIPFLLA 185
Query: 295 ASFAGALQSLLSFRK 309
A SLL+ K
Sbjct: 186 AFMIEQFSSLLNRMK 200
>gi|385224960|ref|YP_005784885.1| cytochrome c biogenesis protein [Helicobacter pylori 83]
gi|332673106|gb|AEE69923.1| cytochrome c biogenesis protein [Helicobacter pylori 83]
Length = 240
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 22 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 79
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 80 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASESNRMQRF 137
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 138 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVVGLAIPFLLVALMLE 195
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 196 RALLFLKSLKKYNRTIEIVSGLVLILMGI 224
>gi|92118129|ref|YP_577858.1| cytochrome c biogenesis protein, transmembrane region [Nitrobacter
hamburgensis X14]
gi|91801023|gb|ABE63398.1| cytochrome c biogenesis protein, transmembrane region [Nitrobacter
hamburgensis X14]
Length = 244
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 86/195 (44%), Gaps = 19/195 (9%)
Query: 127 AGLVTSLSPCTLSVLP--------LTLGYIGAFGSGK-SRAQIIGDSIAFSLGLATTLAL 177
AGLV+ LSPC L ++P T+ ++ + K S+ ++ ++ F LG +T
Sbjct: 13 AGLVSFLSPCVLPLVPPYLVYLTGATIEHVSHDETAKVSKRAVMLAALVFVLGFSTVFVA 72
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
LG ASF G L + A + IVMGL+ L + + F R P
Sbjct: 73 LGASASFIGGLIRAWSAQLSIVAGIVIIVMGLHFLGLTRI-------GFLMREGRLTAPK 125
Query: 238 SVQ---AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
V AY+ GL FA +PC P+LA +L A + G LL Y+ G P LLA
Sbjct: 126 PVGLWGAYVMGLAFAFGWTPCIGPILAAILSVAAAEATVVKGAGLLAVYSAGLGIPFLLA 185
Query: 295 ASFAGALQSLLSFRK 309
A SLL K
Sbjct: 186 ALMIEQFASLLKRMK 200
>gi|349609452|ref|ZP_08888844.1| Thiol:disulfide interchange protein dsbD [Neisseria sp. GT4A_CT1]
gi|348611762|gb|EGY61395.1| Thiol:disulfide interchange protein dsbD [Neisseria sp. GT4A_CT1]
Length = 601
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 96/204 (47%), Gaps = 19/204 (9%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYI-GAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AG+ S + C +LP+ I G +GK RA + S+A+ GLA T L+
Sbjct: 190 NLLAFFTAGVFLSFTACMYPLLPIVSSIIVGDKTAGKGRAFAL--SVAYVQGLALTYTLV 247
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
GV A G + Q + LAA+GL +V+ L++ + +QLP S+F N + +
Sbjct: 248 GVIAGLTGALLTVWLQ-QAWVVLAAAGLMVVLALSMFGLFNIQLPNAVQSYFQNQSSKLS 306
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
S ++ G+ AL PC P L LGY+ + D ++GG L G PL
Sbjct: 307 GGKIFS---VFVMGILSALIVGPCVAPPLGFALGYIGQTGDAVLGGLALYVLALGTGVPL 363
Query: 292 LLAASFAGALQSLLSFRKFSSWIN 315
+L +F G + K W+N
Sbjct: 364 ILIGTFGGHV-----LPKAGDWMN 382
>gi|420403423|ref|ZP_14902609.1| cytochrome c biogenesis protein [Helicobacter pylori CPY6261]
gi|393020589|gb|EJB21728.1| cytochrome c biogenesis protein [Helicobacter pylori CPY6261]
Length = 239
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASESNRMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVVGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRTIEIVSGLVLILMGI 223
>gi|91200435|emb|CAJ73482.1| similar to thiol:disulfide interchange protein [Candidatus Kuenenia
stuttgartiensis]
Length = 601
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 15/226 (6%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS-------RAQIIGDSIAFSLGLA 172
S IF AG+ S +PC ++P+T+ IG SG+ RA ++ S+ + LG++
Sbjct: 187 SFIFIFLAGIGLSFTPCVYPMIPITVAVIGGQASGEQQGRRNSLRAFLL--SLIYVLGIS 244
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGL--NLLEIIELQLPSFFDNFDPRA 230
A LGV A+ G +G + +A+ + L ++ L++PSF + R
Sbjct: 245 IVYAALGVTAASTGALFGAALQSPWVIGFVVAVFVALAMSMFGFYYLRVPSFISD---RL 301
Query: 231 AAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAP 290
++ GL + ASPC P+LA+LL Y+A++ + +G +L + G
Sbjct: 302 GGRTGRGVAGVFVMGLISGIIASPCIGPILASLLVYIASTGNIFLGFWMLFVFAWGLGVL 361
Query: 291 LLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFP 336
L++ +F+GA+++L + + + G LL+G Y +L + P
Sbjct: 362 LIVLGTFSGAVKALPRSGAWMETVERIFGFLLIGAAFY-YLRLIIP 406
>gi|417941047|ref|ZP_12584334.1| cytochrome C biogenesis protein transmembrane region [Streptococcus
oralis SK313]
gi|343388340|gb|EGV00926.1| cytochrome C biogenesis protein transmembrane region [Streptococcus
oralis SK313]
Length = 240
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 103/223 (46%), Gaps = 37/223 (16%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQI-----------IGDSIAFSLGLA 172
+F AG+++ SPC L +LP+ Y G K+ AQ + ++AF G++
Sbjct: 14 VFLAGILSFFSPCILPLLPV---YAGVLLDDKNDAQASSGKFSISVVSLLRTLAFIAGIS 70
Query: 173 TTLALLGVGASFAGK----AYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
LLG GA F G ++ Q TG + I++GL+ ++++ LQ
Sbjct: 71 FVFILLGYGAGFLGNLLYASWFQYVTG------AIIILLGLHQMDVLHLQGLYKERRLQL 124
Query: 229 RAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAT-SKDPLIGGTLLLSYTTGY 287
+ N QA+L GLTF+ A +PC PVL ++L A+ G L+L YT G
Sbjct: 125 KRQGQNANGYSQAFLLGLTFSFAWTPCVGPVLGSVLALAASGGSGAWQGAGLMLVYTLGL 184
Query: 288 VAPLL---LAASFAGALQSLLSFRKFSSWINPMSGALLLGGGL 327
P L LA+S+ L FRK ++P G L GGL
Sbjct: 185 ALPFLVLALASSYV-----LKHFRK----LHPYLGTLKKVGGL 218
>gi|392310439|ref|ZP_10272973.1| cytochrome c biogenesis protein [Pseudoalteromonas citrea NCIMB
1889]
Length = 228
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 22/196 (11%)
Query: 110 LGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSL 169
L Q S SF + + F GL+TSLS C +LP+T+ + S S + + ++ + L
Sbjct: 9 LLQKSQPSFYWILLAFFMGLLTSLSTCIYPLLPITVATL----SQNSTSSVALRALLYCL 64
Query: 170 GLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEII------ELQLPSFF 223
GLA+ A+LG A+ +G+ +G I A+ + ++ NLL + + LP+F
Sbjct: 65 GLASVYAILGATAALSGQFFGAI------ASHPITQIVFANLLLLFAFVLKGWIPLPAFL 118
Query: 224 DNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSY 283
F + +S A L G+ A+PCS+P+LA +L +VA ++ G +L S+
Sbjct: 119 YTFSQKQ------NSHSALLMGIASGFVAAPCSSPILAAILLFVAEQQNLPWGIAILFSF 172
Query: 284 TTGYVAPLLLAASFAG 299
G L A F+G
Sbjct: 173 AVGMCLLLFFAGIFSG 188
>gi|419795685|ref|ZP_14321270.1| disulfide bond corrector protein DsbC [Neisseria sicca VK64]
gi|385700263|gb|EIG30515.1| disulfide bond corrector protein DsbC [Neisseria sicca VK64]
Length = 601
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 96/204 (47%), Gaps = 19/204 (9%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYI-GAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AG+ S + C +LP+ I G +GK RA + S+A+ GLA T L+
Sbjct: 190 NLLAFFTAGVFLSFTACMYPLLPIVSSIIVGDKTAGKGRAFAL--SVAYVQGLALTYTLV 247
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
GV A G + Q + LAA+GL +V+ L++ + +QLP S+F N + +
Sbjct: 248 GVIAGLTGALLTVWLQ-QAWVVLAAAGLMVVLALSMFGLFNIQLPNAVQSYFQNQSSKLS 306
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
S ++ G+ AL PC P L LGY+ + D ++GG L G PL
Sbjct: 307 GGKIFS---VFVMGILSALIVGPCVAPPLGFALGYIGQTGDAVLGGLALYVLALGTGVPL 363
Query: 292 LLAASFAGALQSLLSFRKFSSWIN 315
+L +F G + K W+N
Sbjct: 364 ILIGTFGGHV-----LPKAGDWMN 382
>gi|420473676|ref|ZP_14972354.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-19]
gi|393090804|gb|EJB91437.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-19]
Length = 239
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFAWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLILMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S RK++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLRKYNRAIEIVSGLVLILMGV 223
>gi|254473553|ref|ZP_05086949.1| cytochrome c-type biogenesis protein CcdA [Pseudovibrio sp. JE062]
gi|374329719|ref|YP_005079903.1| Cytochrome c assembly protein, transmembrane region
domain-containing protein [Pseudovibrio sp. FO-BEG1]
gi|211957265|gb|EEA92469.1| cytochrome c-type biogenesis protein CcdA [Pseudovibrio sp. JE062]
gi|359342507|gb|AEV35881.1| protein containing Cytochrome c assembly protein, transmembrane
region domain [Pseudovibrio sp. FO-BEG1]
Length = 222
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 87/196 (44%), Gaps = 13/196 (6%)
Query: 138 LSVLPLTLGYIGAFGSGK---------SRAQIIGDSIAFSLGLATTLALLGVGASFAGKA 188
+ ++P L YI G + + +++ S F+ G+ T LG A+ G+
Sbjct: 1 MPIVPFYLCYIAGIGMNELSGDGVTPAIQRRVVFTSFFFAAGILTIFVGLGATATVFGQL 60
Query: 189 YGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTF 248
L A+ + ++GL+ + II L L D +A A + AYL GL F
Sbjct: 61 LRDWFDVLRYIAAAVIFILGLHFVGIIRLNLLLREARLDSSSAPAGI---IGAYLVGLAF 117
Query: 249 ALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLL-SF 307
A +PC PVLAT+L S D G LL +Y G P +LAA F+ S + F
Sbjct: 118 AFGWTPCVGPVLATILFTAGASDDVSQGMLLLFAYGVGMTLPFILAAVFSKPFLSFMGRF 177
Query: 308 RKFSSWINPMSGALLL 323
RK+ I G LL+
Sbjct: 178 RKYLGAIEKGMGVLLI 193
>gi|450067044|ref|ZP_21846376.1| putative cytochrome C biogenesis protein [Streptococcus mutans
NLML9]
gi|449208478|gb|EMC09073.1| putative cytochrome C biogenesis protein [Streptococcus mutans
NLML9]
Length = 237
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-------SIAFS 168
L ++ +F GL++ SPC L +LP+ +G + G K +II D + F
Sbjct: 3 LQHITILTLFIEGLLSFFSPCVLPILPVYIGILAGQGEEKQSGEIIWDRRKVFTNTFLFI 62
Query: 169 LGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
G+A T +L +S + L L ++MGL + +I+ S F N +
Sbjct: 63 FGIAATFFILAFASSLISQFLQSHIQFLQNLGGILILIMGLVQVGLIK----SHFFNREY 118
Query: 229 RAAAANFPSSVQ-----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSY 283
A + + + A+L G TF+ + +PC P+LA++ Y +T + + L+L Y
Sbjct: 119 SAKNKVYQAGQKVTPLIAFLMGFTFSFSWTPCIGPILASVFLYASTHQG-IYSVLLILIY 177
Query: 284 TTGYVAPLLLAASFAGALQSLLSFRK 309
G+V P L A F+ + S+ +K
Sbjct: 178 CLGFVIPFALIALFSQRVMSVFKKQK 203
>gi|420488498|ref|ZP_14987098.1| cytochrome c biogenesis protein [Helicobacter pylori Hp P-11]
gi|420522428|ref|ZP_15020852.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-11b]
gi|393109069|gb|EJC09601.1| cytochrome c biogenesis protein [Helicobacter pylori Hp P-11]
gi|393129385|gb|EJC29819.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-11b]
Length = 239
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAF-------GSGKSRAQIIGDSIAFSLGLATTLALLG 179
AG++T LSPC L ++P + YI G K R + S+ F +G +L LG
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGRAK-RVSVFLKSLMFVVGF--SLVFLG 77
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSS 238
VG S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 78 VGMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQR 135
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SF 297
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 136 FYPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLILMVVFVMGLAIPFLLVALML 193
Query: 298 AGALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S RK++ I +SG +L+ G+
Sbjct: 194 ERALLFLKSLRKYNRAIEIVSGLVLVLMGI 223
>gi|255067416|ref|ZP_05319271.1| thiol:disulfide interchange protein DsbD [Neisseria sicca ATCC
29256]
gi|255048386|gb|EET43850.1| thiol:disulfide interchange protein DsbD [Neisseria sicca ATCC
29256]
Length = 601
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 96/204 (47%), Gaps = 19/204 (9%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYI-GAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AG+ S + C +LP+ I G +GK RA + S+A+ GLA T L+
Sbjct: 190 NLLAFFTAGVFLSFTACMYPLLPIVSSIIVGDKTAGKGRAFAL--SVAYVQGLALTYTLV 247
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
GV A G + Q + LAA+GL +V+ L++ + +QLP S+F N + +
Sbjct: 248 GVIAGLTGALLTVWLQ-QAWVVLAAAGLMVVLALSMFGLFNIQLPNAVQSYFQNQSSKLS 306
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
S ++ G+ AL PC P L LGY+ + D ++GG L G PL
Sbjct: 307 GGKIFS---VFVMGILSALIVGPCVAPPLGFALGYIGQTGDAVLGGLALYVLALGTGVPL 363
Query: 292 LLAASFAGALQSLLSFRKFSSWIN 315
+L +F G + K W+N
Sbjct: 364 ILIGTFGGHV-----LPKAGDWMN 382
>gi|299534981|ref|ZP_07048309.1| cytochrome c-type biogenesis protein CcdA [Lysinibacillus
fusiformis ZC1]
gi|298729623|gb|EFI70170.1| cytochrome c-type biogenesis protein CcdA [Lysinibacillus
fusiformis ZC1]
Length = 236
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 17/223 (7%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAF-------GSGKSRAQIIGDSIAFSLGLA 172
+L ++FGAGL++ LSPC+L + P L YI G I +++ F LG +
Sbjct: 6 NLLLVFGAGLLSFLSPCSLPLYPAFLSYITGVSLNELKENKGILSRHAIKNTLLFLLGFS 65
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
LG+ SF G + Q L + + + GL + I++L F + +
Sbjct: 66 IIFIALGLSTSFIGTFFIQYKDLLRQVGAIIMVFFGLISVGILKLD----FLLSEKKYQF 121
Query: 233 ANFPS-SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
N PS ++ + G+ FA +PC+ P+LA ++ T+ D G +L Y G+ P
Sbjct: 122 KNKPSGNIGSIFIGIGFAAGWTPCTGPILAGVMALGLTNPDK--GLLYMLIYVLGFSIPF 179
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
L+ + F G L+ F+K S + G +++ G+ + D +
Sbjct: 180 LMMSLFIGKLR---FFQKRSHQFMIIGGWIMILMGILLYFDMM 219
>gi|197122142|ref|YP_002134093.1| cytochrome C biogenesis protein transmembrane region
[Anaeromyxobacter sp. K]
gi|196171991|gb|ACG72964.1| cytochrome c biogenesis protein transmembrane region
[Anaeromyxobacter sp. K]
Length = 401
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 116/221 (52%), Gaps = 12/221 (5%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIG-----AFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+F AG++T SPC L ++P+ L +G A G+ ++ +IAFSLGLA L
Sbjct: 8 LFAAGILTFASPCVLPLVPVYLSLLGGASVDALRRGERPRGLVPSAIAFSLGLAAVFVAL 67
Query: 179 GVGASFAGKAYGQIGTGLPLAASG-LAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
G GAS AG+A L LA SG L + +GL +L + L+LP+ P A
Sbjct: 68 GAGASAAGEALSAHRDAL-LAVSGALVVALGLKVLGV--LRLPALDVERRPWLARVRPGG 124
Query: 238 SVQAYLA-GLTFALAASPCSTPVLATLLGYVATS-KDPLIGGTLLLSYTTGYVAPLLLAA 295
S+ A LA G FAL +PC PVL ++L + A++ P G L +Y G V PL+LAA
Sbjct: 125 SLAASLAFGGAFALGWTPCVGPVLGSVLTWTASAGASPARGALYLGTYAAGLVTPLVLAA 184
Query: 296 SFAGALQSLLS-FRKFSSWINPMSGALLLGGGLYTFLDRLF 335
+FAG + L ++ + +G LL+G G+ DRL
Sbjct: 185 AFAGRALAWLDRLKRQLPRLEKATGLLLVGAGILLATDRLM 225
>gi|83952277|ref|ZP_00961009.1| putative cytochrome c-type biogenesis protein CcdA [Roseovarius
nubinhibens ISM]
gi|83837283|gb|EAP76580.1| putative cytochrome c-type biogenesis protein CcdA [Roseovarius
nubinhibens ISM]
Length = 262
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 90/195 (46%), Gaps = 13/195 (6%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIG-------AFGSGKSRAQIIGDSIAFSLGLATTL 175
V AG+++ LSPC L ++P L Y+ + G + A ++ +I F +GL+T
Sbjct: 29 VALAAGIISFLSPCVLPIVPPYLAYMSGTTLADLSAGDRRRNAAVV-PAIFFVMGLSTIF 87
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
+LG AS AG Q A +V GL+ L+I L+LP F N + R A +
Sbjct: 88 LILGFAASVAGTMILQFQGYFNALAGITVMVFGLHFLQI--LRLP--FLNREARVDAGDR 143
Query: 236 P-SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
S+ AYL GL FA +PC P L +L A+ G LL Y G P +L
Sbjct: 144 GGSAFGAYLLGLAFAFGWTPCIGPQLGAILSLAASEASVPRGTALLAVYAMGLGLPFILV 203
Query: 295 ASFAGALQSLLSFRK 309
A F + L + K
Sbjct: 204 ALFLPRMGGFLGWMK 218
>gi|340362143|ref|ZP_08684540.1| thiol:disulfide interchange protein DsbD [Neisseria macacae ATCC
33926]
gi|339887744|gb|EGQ77266.1| thiol:disulfide interchange protein DsbD [Neisseria macacae ATCC
33926]
Length = 601
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 96/204 (47%), Gaps = 19/204 (9%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYI-GAFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+L F AG+ S + C +LP+ I G +GK RA + S+A+ GLA T L+
Sbjct: 190 NLLAFFTAGVFLSFTACMYPLLPIVSSIIVGDKTAGKGRAFAL--SVAYVQGLALTYTLV 247
Query: 179 GVGASFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----SFFDNFDPRAA 231
GV A G + Q + LAA+GL +V+ L++ + +QLP S+F N + +
Sbjct: 248 GVIAGLTGALLTVWLQ-QAWVVLAAAGLMVVLALSMFGLFNIQLPNAVQSYFQNQSSKLS 306
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
S ++ G+ AL PC P L LGY+ + D ++GG L G PL
Sbjct: 307 GGKIFS---VFVMGILSALIVGPCVAPPLGFALGYIGQTGDAVLGGLALYVLALGTGVPL 363
Query: 292 LLAASFAGALQSLLSFRKFSSWIN 315
+L +F G + K W+N
Sbjct: 364 ILIGTFGGHV-----LPKAGDWMN 382
>gi|52548639|gb|AAU82488.1| cytochrome c-type biogenesis protein [uncultured archaeon
GZfos17G11]
Length = 216
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 97/212 (45%), Gaps = 17/212 (8%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASF 184
FG G+++ SPC L V+PL Y S KS I I +GL+ + L+GV AS
Sbjct: 11 FGFGVLSVFSPCILPVIPLIAAY-----STKSGKYI---PITIVIGLSASFTLMGVLASA 62
Query: 185 AGKAYGQIGTGLPLAASGLAIVMGLNLL-----EIIELQLPSFFDNFDPRAAAANFPSSV 239
G + Q T L + I++GL +L + I +PS P+ + N S+
Sbjct: 63 FGSVFQQYQTMLYTIGGVVIILLGLCMLFDAIEQNIRRIIPS--TGLSPKFSMTNAGSTA 120
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
+ G + + PC P+L +L VA + L G LL Y+ G PLL A +
Sbjct: 121 GGLMFGFSLGIIWIPCVGPILGAILAIVAVEGNILYGAILLAIYSLGLGIPLLALAYLSQ 180
Query: 300 ALQSLLSFRKFSSWINPMSGALLLGGGLYTFL 331
+L K+S I +SG +L+ GLY L
Sbjct: 181 F--TLRPLNKYSVIIKRLSGVMLVLIGLYMLL 210
>gi|420483548|ref|ZP_14982178.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-3]
gi|420513903|ref|ZP_15012376.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-3b]
gi|393102773|gb|EJC03337.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-3]
gi|393158366|gb|EJC58626.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-3b]
Length = 239
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G + L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGFS--LVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDTY-GLILMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRTIEIVSGLVLILMGI 223
>gi|149204596|ref|ZP_01881562.1| Cytochrome c biogenesis protein, transmembrane region [Roseovarius
sp. TM1035]
gi|149142095|gb|EDM30144.1| Cytochrome c biogenesis protein, transmembrane region [Roseovarius
sp. TM1035]
Length = 244
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 102/214 (47%), Gaps = 26/214 (12%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYI-----------GAFGSGKSRAQIIGDSIAFSLGLAT 173
F G ++ LSPC VLPL GY+ GA S RA+ + S+ F LG +T
Sbjct: 13 FLGGAISFLSPC---VLPLAPGYVSYIAGQPAAKSGAARSIAERARSVVLSLWFVLGFST 69
Query: 174 TLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAA 233
LG GAS G + L LA L ++ GL ++ I ++P+ + P
Sbjct: 70 VFVALGAGASLLGGMLLRWKYELGLAGGFLIVLFGLVMMGAI--KIPAMMRDTRPDVKV- 126
Query: 234 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
+ S+V AYL GL FA +PC PVL ++L ATS G LL Y+ G P L+
Sbjct: 127 DGGSAVGAYLLGLAFAFGWTPCIGPVLGSILAVSATSGAD--GMALLAIYSAGLGLPFLI 184
Query: 294 AASF----AGALQSLLSFRKFSSWINPMSGALLL 323
A F AG L+ + + + W+ +SG L++
Sbjct: 185 IALFTNEIAGRLKRIGAAGR---WLYRISGGLMV 215
>gi|384888921|ref|YP_005763223.1| cytochrome c biogenesis protein [Helicobacter pylori v225d]
gi|297379487|gb|ADI34374.1| cytochrome c biogenesis protein [Helicobacter pylori v225d]
Length = 239
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVVGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRTIEIVSGLVLILMGV 223
>gi|333993709|ref|YP_004526322.1| C-type cytochrome biogenesis protein [Treponema azotonutricium
ZAS-9]
gi|333736547|gb|AEF82496.1| C-type cytochrome biogenesis protein [Treponema azotonutricium
ZAS-9]
Length = 231
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 108/236 (45%), Gaps = 32/236 (13%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRA-QIIGDSIAFSLGLATTLALL 178
S+ + F AGL++ LSPC L ++P L +G +G SR +I +++F LG + LL
Sbjct: 6 SIFLAFAAGLLSFLSPCVLPLIPSYLSILGGMSAGDSRGPHLIVGTVSFILGFSAVFVLL 65
Query: 179 GVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSS 238
+ +S G I + + A + IV+GLN++ SF N++ R + P
Sbjct: 66 SILSSLFFFFIGGISQYINIVAGIIVIVLGLNVI----FDFLSFL-NYEKRYHSEKRPRG 120
Query: 239 VQA-YLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
+ +LAGL F +PC P+LA++L + L+ Y+ G P L A F
Sbjct: 121 IIGTFLAGLAFGAGWTPCIGPILASILLLAGQQGKAGVAVLYLVVYSAGLGLPFLGVAIF 180
Query: 298 AGALQSLLSFRKF---SSW-------INPMSGAL------LLGGGLYTFLDRLFPT 337
F +F +W I +SG + L+ G +T L+RL P+
Sbjct: 181 ---------FDRFLARKAWLTSRLPLIRKISGVMLILIGILILSGKFTILNRLIPS 227
>gi|120597525|ref|YP_962099.1| thiol:disulfide interchange protein [Shewanella sp. W3-18-1]
gi|120557618|gb|ABM23545.1| Protein-disulfide reductase [Shewanella sp. W3-18-1]
Length = 604
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 10/200 (5%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
+L + FG G+ +L+PC + P+ G I G S A+ S+A+ G+A T +LLG
Sbjct: 194 TLVIFFGLGIGLALTPCVFPMYPILSGIIVGQGQKLSTAKAFTLSMAYVQGMAITYSLLG 253
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAI---VMGLNLLEIIELQLPSFF-DNFDPRAAAANF 235
+ + AG Y Q P LAI V+ L++ + +L+LPS + + + + +
Sbjct: 254 LVVASAGMKY-QAALQHPAVLVVLAILFFVLSLSMFGLYDLKLPSRWQEKMNSVSNSQKG 312
Query: 236 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
+ V +L G+ L ASPC+T L+ L YVA + D L G L + G PLL+
Sbjct: 313 GNLVGVFLMGVISGLVASPCTTAPLSGALVYVAQTGDLLQGFLALYVLSMGMGVPLLIIG 372
Query: 296 SFAGALQSLLSFRKFSSWIN 315
+ G L + +W+N
Sbjct: 373 TSGGKL-----LPRAGAWMN 387
>gi|296444550|ref|ZP_06886514.1| cytochrome c biogenesis protein transmembrane region [Methylosinus
trichosporium OB3b]
gi|296257818|gb|EFH04881.1| cytochrome c biogenesis protein transmembrane region [Methylosinus
trichosporium OB3b]
Length = 243
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG------SGKSRAQ--IIGDSIAFSLGLATTLALL 178
AG+++ LSPC L ++P L +I +GK+RA+ ++ ++ F G +T L
Sbjct: 13 AGVLSFLSPCVLPLVPPYLTFIAGASLEELTIAGKARAKRDVLIAALLFVAGFSTVFVAL 72
Query: 179 GVGASFAGKAYGQIGTGLPLAASGLAIV-MGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
G AS GK L +AA GLAI+ MGL+ L + ++ L F+
Sbjct: 73 GATASVFGKVLRANLEILSIAA-GLAIILMGLHFLGVFKIGLLYREKRFE----VGRPVG 127
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
+ AY+ GL FA +PC P+LA +L + + G LL Y+ G P L+AA+
Sbjct: 128 RLGAYVMGLAFAFGWTPCIGPILAAILAVAGSQETVARGAALLAVYSAGLGLPFLVAAAA 187
Query: 298 AGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
G + F++ + + GALL+ GL
Sbjct: 188 MGPFMGFMQRFKRHFGKVEKIVGALLVVTGL 218
>gi|254559351|ref|YP_003066446.1| sulfur oxidation V protein, cytochrome C-type biogenesis protein
[Methylobacterium extorquens DM4]
gi|254266629|emb|CAX22401.1| sulfur oxidation V protein, cytochrome c-type biogenesis protein
[Methylobacterium extorquens DM4]
Length = 244
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 98/220 (44%), Gaps = 22/220 (10%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD------------SIAFSLGLA 172
FGAGL++ LSPC L ++P L ++ +G S +++ S+AF LG A
Sbjct: 11 FGAGLLSFLSPCILPLVPPYLCFL----AGASLQELVDRPDRTLARRAVLRSLAFVLGFA 66
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFD-NFDPRAA 231
LG AS G+ L A + +V+GL+++ + +P D F A
Sbjct: 67 MVFVALGASASAVGQLLTDHVGVLSRVAGVVIVVLGLHMIGVFR-WMPLLRDVRFQVEAR 125
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
V A+L GL FA +PC PVLA++L + + G LL +Y G P
Sbjct: 126 PEG---VVGAFLVGLAFAFGWTPCVGPVLASILLLAGGEDEVVRGAWLLAAYAAGIGLPF 182
Query: 292 LLAASFAGALQSLLS-FRKFSSWINPMSGALLLGGGLYTF 330
+ AA F G + S FR+ + G L+ G+ F
Sbjct: 183 IAAAFFTGPFLRVASRFRRHVRAVEATMGIALVATGIVIF 222
>gi|71083483|ref|YP_266202.1| holocytochrome-c synthase ccdA [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062596|gb|AAZ21599.1| probable holocytochrome-c synthase ccdA [Candidatus Pelagibacter
ubique HTCC1062]
Length = 235
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 21/205 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDS-------IAFSLGLA 172
L + FGAGL++ LSPC VLPL GY+ +F +G + ++I+ I FSLG +
Sbjct: 3 ELIIAFGAGLISFLSPC---VLPLIPGYV-SFITGSTLSEILEKKKIDLLPLIVFSLGFS 58
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
+ G ASF G+ Q L + A + I+ L L+ ++ ++ F N + +
Sbjct: 59 FVFIIFGATASFLGQILLQNSQILRIIAGVIIIIFSLQLIGVLNIK----FLNIEKKFYT 114
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPL 291
+ ++ G+ F +PC P+L ++L +A++++ + LLLS Y+ G P
Sbjct: 115 KKSNNIFFIFIVGMAFGFGWTPCIGPILGSILA-LASTEETIYKAILLLSFYSLGLAIPF 173
Query: 292 LLAASFAGALQSLLSFRK-FSSWIN 315
+L+ +Q L F K F IN
Sbjct: 174 ILSGY---LMQKFLLFSKNFKKNIN 195
>gi|349573959|ref|ZP_08885922.1| thiol:disulfide interchange protein DsbD [Neisseria shayeganii 871]
gi|348014437|gb|EGY53318.1| thiol:disulfide interchange protein DsbD [Neisseria shayeganii 871]
Length = 651
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYI-GAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGA 182
+FG GL S + C +LP+ G I G + K R ++ S + GLA T L+GV A
Sbjct: 249 VFGIGL--SFTACMYPLLPIVSGIIVGDRSASKGRGFLL--SFIYVQGLALTYTLVGVAA 304
Query: 183 SFAGKAYGQIGTGLP---LAASGLAIVMGLNLLEIIELQLPS----FFDNFDPRAAAANF 235
G A + P L+A+ L +V+ L + ++ +QLPS +F N + +
Sbjct: 305 GLTG-ALLTVWLQQPWVVLSAAALMVVLALGMFDVFTIQLPSRLQSYFQNQSNKLSGGK- 362
Query: 236 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
+ ++ G+ AL PC P LA LGY+ + D +GG L S G PL+L
Sbjct: 363 --AASVFVMGMLSALIVGPCVAPPLAVALGYIGQTGDAALGGLALYSLALGTGVPLMLVG 420
Query: 296 SFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+F G + + W+N + G +LL +Y
Sbjct: 421 TFGGHI-----LPRAGDWMNGIKYAFGVILLAVAVY 451
>gi|269791792|ref|YP_003316696.1| cytochrome c biogenesis protein transmembrane region
[Thermanaerovibrio acidaminovorans DSM 6589]
gi|269099427|gb|ACZ18414.1| cytochrome c biogenesis protein transmembrane region
[Thermanaerovibrio acidaminovorans DSM 6589]
Length = 214
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 97/204 (47%), Gaps = 25/204 (12%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
SL FG GL+ +LSPC +P+TL + A SRA + + G+A L LG
Sbjct: 6 SLVGAFGMGLLGALSPCLAVTIPMTLA-LAAGTRSPSRAMGLAMGLLLWAGMALALVPLG 64
Query: 180 VGASFAGKA--------YGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAA 231
VGASF G A YG +G L ++ GL L++I QLPS R
Sbjct: 65 VGASFLGGALRARPGLLYGALGV--------LTMLAGLGTLDLI--QLPSVRLPMHGR-- 112
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
F + A AG A +SPCS+P+L LG A+ + ++L+Y+ G+ P
Sbjct: 113 ---FTGPLGALAAGFAIAFLSSPCSSPLLIAALGLSASGGA-ISAAAVMLAYSAGHSVPF 168
Query: 292 LLAASFAGALQSLLSFRKFSSWIN 315
LLA + A ++ LL R+ + +
Sbjct: 169 LLAGASAALVRRLLEDRRLTGSVR 192
>gi|197119773|ref|YP_002140200.1| cytochrome c biogenesis protein CcdA [Geobacter bemidjiensis Bem]
gi|197089133|gb|ACH40404.1| cytochrome c biogenesis protein CcdA [Geobacter bemidjiensis Bem]
Length = 238
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 88/200 (44%), Gaps = 17/200 (8%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFG---------SGKSRAQIIGDSIAFSLGLATTL 175
F AGL++ LSPC L ++P + YI S K R Q I S+ F G
Sbjct: 12 FVAGLLSFLSPCVLPLIPSYITYITGLSFADLQAEHPSHKVRQQTIIHSLLFIAGFTCVF 71
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
+LG ASF G + T + + ++ G+++ + ++ L A +
Sbjct: 72 VILGASASFLGDFLQEHKTAIRRIGGVMIVIFGVHVSGLFDIGLLLGEKKLTLHRKPAGY 131
Query: 236 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
S ++ G+ FA +PC P+LAT+L AT G LLL+Y+ G P LA+
Sbjct: 132 LGS---FVVGVVFAAGWTPCIGPILATILAVAATEGR---GVWLLLAYSMGLAIPFFLAS 185
Query: 296 SFAGALQSLLSFRKFSSWIN 315
Q L+ F++F I
Sbjct: 186 --LALHQFLVFFKRFKRHIR 203
>gi|425790668|ref|YP_007018585.1| cytochrome c biogenesis protein [Helicobacter pylori Aklavik86]
gi|425628983|gb|AFX89523.1| cytochrome c biogenesis protein [Helicobacter pylori Aklavik86]
Length = 239
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDTY-GLMLMVVFVVGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGV 223
>gi|220916199|ref|YP_002491503.1| cytochrome c biogenesis protein transmembrane protein
[Anaeromyxobacter dehalogenans 2CP-1]
gi|219954053|gb|ACL64437.1| cytochrome c biogenesis protein transmembrane region
[Anaeromyxobacter dehalogenans 2CP-1]
Length = 232
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 12/205 (5%)
Query: 129 LVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKA 188
L +LSPC LS +PL + Y+ S +G S +F+LG+ ++A +GV G+
Sbjct: 29 LSVALSPCHLSSIPLVVAYMNGGREPPSVRAALGLSTSFALGILASIAAVGVATVLLGRM 88
Query: 189 YGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTF 248
G +G A + + +GLNLL + L LPS+ PR+A P + A + G F
Sbjct: 89 AGDVGPAGNYALAAVFFAVGLNLLGV--LPLPSW---SVPRSAGRRGP--LGALVLGAIF 141
Query: 249 ALAASPCSTPVLATLLG--YVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLS 306
A PC+ +A LLG + A+ D GG L+ +Y G+ +++A + +Q LS
Sbjct: 142 GAALGPCTFAFMAPLLGLAFRASGADAARGGLLVAAYAIGHTIAIVVAGASVQGVQRWLS 201
Query: 307 FR---KFSSWINPMSGALLLGGGLY 328
+ + ++ + ++G ++ GG +
Sbjct: 202 WSAGGRAAAVLRSVAGVAVIAGGAW 226
>gi|187930335|ref|YP_001900822.1| Protein-disulfide reductase [Ralstonia pickettii 12J]
gi|187727225|gb|ACD28390.1| Protein-disulfide reductase [Ralstonia pickettii 12J]
Length = 605
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 87/170 (51%), Gaps = 5/170 (2%)
Query: 135 PCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKA-YGQIG 193
PC L +LP+ + + +SRA I+ S+A+ LG+A +GV A AG+ +
Sbjct: 195 PCVLPMLPILSAIVVGEHATRSRAAIV--SVAYVLGMAFVYTAVGVAAGLAGQGLQAALQ 252
Query: 194 TGLPLAA-SGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSS-VQAYLAGLTFALA 251
L A + L + + L++ + ELQLP+ + + +A++ + V A + G AL
Sbjct: 253 NAWVLGAFAVLMVALSLSMFGLYELQLPAAWRDHLTKASSKHGGGEIVGAVVMGALSALI 312
Query: 252 ASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGAL 301
SPC TP LA L Y+A + + IGG L + + G PL+L AG L
Sbjct: 313 VSPCVTPALAGALAYIAQTGNAAIGGMALFAMSIGMGVPLVLVGVGAGNL 362
>gi|420433447|ref|ZP_14932455.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-24]
gi|420471754|ref|ZP_14970450.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-18]
gi|420485307|ref|ZP_14983925.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-4]
gi|420497197|ref|ZP_14995758.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-25]
gi|420507203|ref|ZP_15005716.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp H-24b]
gi|420508893|ref|ZP_15007395.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp H-24c]
gi|420515798|ref|ZP_15014261.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-4c]
gi|420517502|ref|ZP_15015956.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-4d]
gi|420527544|ref|ZP_15025938.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-25c]
gi|420529566|ref|ZP_15027953.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-25d]
gi|420532641|ref|ZP_15031004.1| cytochrome c biogenesis protein [Helicobacter pylori Hp M1]
gi|420534204|ref|ZP_15032555.1| cytochrome c biogenesis protein [Helicobacter pylori Hp M2]
gi|420537715|ref|ZP_15036045.1| cytochrome c biogenesis protein [Helicobacter pylori Hp M4]
gi|420539440|ref|ZP_15037759.1| cytochrome c biogenesis protein [Helicobacter pylori Hp M5]
gi|420541198|ref|ZP_15039506.1| cytochrome c biogenesis protein [Helicobacter pylori Hp M6]
gi|420542722|ref|ZP_15041017.1| cytochrome c biogenesis protein [Helicobacter pylori Hp M9]
gi|393050975|gb|EJB51928.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-24]
gi|393091109|gb|EJB91741.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-18]
gi|393103442|gb|EJC04005.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-4]
gi|393114894|gb|EJC15409.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-25]
gi|393119284|gb|EJC19775.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp H-24b]
gi|393120319|gb|EJC20808.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp H-24c]
gi|393123001|gb|EJC23470.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-4d]
gi|393124097|gb|EJC24565.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-4c]
gi|393134670|gb|EJC35079.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-25c]
gi|393137335|gb|EJC37721.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-25d]
gi|393140272|gb|EJC40645.1| cytochrome c biogenesis protein [Helicobacter pylori Hp M1]
gi|393142427|gb|EJC42781.1| cytochrome c biogenesis protein [Helicobacter pylori Hp M2]
gi|393145270|gb|EJC45601.1| cytochrome c biogenesis protein [Helicobacter pylori Hp M4]
gi|393147125|gb|EJC47450.1| cytochrome c biogenesis protein [Helicobacter pylori Hp M5]
gi|393147818|gb|EJC48142.1| cytochrome c biogenesis protein [Helicobacter pylori Hp M6]
gi|393159785|gb|EJC60034.1| cytochrome c biogenesis protein [Helicobacter pylori Hp M9]
Length = 239
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDTY-GLILMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|407796363|ref|ZP_11143318.1| cytochrome c-type biogenesis protein CcdA [Salimicrobium sp. MJ3]
gi|407019365|gb|EKE32082.1| cytochrome c-type biogenesis protein CcdA [Salimicrobium sp. MJ3]
Length = 254
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 90/205 (43%), Gaps = 31/205 (15%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAF--------GSGKSRAQIIGDSIAFSLGLATTLA 176
FGAG+++ LSPCTL + P L YI + + R +++ S+ F +G+AT
Sbjct: 11 FGAGVLSFLSPCTLPIFPAYLSYITGMSVKDIQDQNNPQIRKKVLLHSVFFLIGVATVFL 70
Query: 177 LLGVGASFAGKAY-----GQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAA 231
LG GAS AG+ G G L A IVMGL + I NF
Sbjct: 71 SLGFGASLAGQWMQGVLTGDSGVFLQRIAGVFIIVMGLFVAGWI---------NFSWLMR 121
Query: 232 AANF---PSSVQAY----LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYT 284
F P Y GL FA +PC P+ ++L V + +P G + Y
Sbjct: 122 EKRFSVKPKRTLGYTGSVFTGLGFAAGWTPCIGPIFGSIL--VLAASNPTQGMVYSVFYV 179
Query: 285 TGYVAPLLLAASFAGALQSLLSFRK 309
G+ P L+ + F G+ ++++ + +
Sbjct: 180 LGFALPFLIFSFFVGSARAVVRYSQ 204
>gi|127514194|ref|YP_001095391.1| thiol:disulfide interchange protein [Shewanella loihica PV-4]
gi|126639489|gb|ABO25132.1| Protein-disulfide reductase [Shewanella loihica PV-4]
Length = 602
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 99/212 (46%), Gaps = 19/212 (8%)
Query: 105 ANEAVLGQLSALS--------FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS 156
+N+A + Q +LS +L + FG G+ +L+PC + P+ G I G S
Sbjct: 172 SNQAPITQQDSLSQMLSGDNLLWTLVIFFGLGIGLALTPCVFPMYPILSGIIVGQGEKLS 231
Query: 157 RAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAI---VMGLNLLE 213
+ S+ + G+A T +LLG+ + AG Y Q P GLAI V+ L++
Sbjct: 232 TGKAFSLSMVYVQGMAITYSLLGLIVASAGMKY-QAALQHPAVLVGLAILFLVLSLSMFG 290
Query: 214 IIELQLPSFF----DNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAT 269
+ EL+LPS + + F N + ++ G+ L ASPC+T L+ L YVA
Sbjct: 291 LYELRLPSSWQEKMNRFSNNQKGGNV---LGVFVMGIISGLVASPCTTAPLSGALVYVAQ 347
Query: 270 SKDPLIGGTLLLSYTTGYVAPLLLAASFAGAL 301
+ D + G L + G PLL+ S G L
Sbjct: 348 TGDLMQGFLALYVLSMGMGLPLLIIGSSGGKL 379
>gi|425788896|ref|YP_007016816.1| cytochrome c biogenesis protein [Helicobacter pylori Aklavik117]
gi|425627211|gb|AFX90679.1| cytochrome c biogenesis protein [Helicobacter pylori Aklavik117]
Length = 239
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNNMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVVGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGV 223
>gi|420443273|ref|ZP_14942201.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-41]
gi|420475150|ref|ZP_14973821.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-21]
gi|420498834|ref|ZP_14997391.1| cytochrome c biogenesis protein [Helicobacter pylori Hp P-26]
gi|420536009|ref|ZP_15034351.1| cytochrome c biogenesis protein [Helicobacter pylori Hp M3]
gi|393060780|gb|EJB61649.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-41]
gi|393093257|gb|EJB93874.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-21]
gi|393143657|gb|EJC44001.1| cytochrome c biogenesis protein [Helicobacter pylori Hp M3]
gi|393152813|gb|EJC53109.1| cytochrome c biogenesis protein [Helicobacter pylori Hp P-26]
Length = 239
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDTY-GLILMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|385228028|ref|YP_005787961.1| cytochrome c biogenesis protein [Helicobacter pylori Puno120]
gi|344334466|gb|AEN14910.1| cytochrome c biogenesis protein [Helicobacter pylori Puno120]
Length = 239
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVVGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRTIEIVSGLVLILMGI 223
>gi|312111513|ref|YP_003989829.1| cytochrome C biogenesis protein transmembrane region [Geobacillus
sp. Y4.1MC1]
gi|336235917|ref|YP_004588533.1| cytochrome c biogenesis protein transmembrane region [Geobacillus
thermoglucosidasius C56-YS93]
gi|423720462|ref|ZP_17694644.1| cytochrome c-type biogenesis protein [Geobacillus thermoglucosidans
TNO-09.020]
gi|311216614|gb|ADP75218.1| cytochrome c biogenesis protein transmembrane region [Geobacillus
sp. Y4.1MC1]
gi|335362772|gb|AEH48452.1| cytochrome c biogenesis protein transmembrane region [Geobacillus
thermoglucosidasius C56-YS93]
gi|383366517|gb|EID43807.1| cytochrome c-type biogenesis protein [Geobacillus thermoglucosidans
TNO-09.020]
Length = 235
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 103/223 (46%), Gaps = 17/223 (7%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ-------IIGDSIAFSLGLA 172
+L + FGAG ++ +SPC L + P L YI + +A+ + ++ F LG +
Sbjct: 5 NLFLAFGAGFLSFISPCCLPLYPAFLSYITGVSVSELKAENAMMQRRSLLHTLFFLLGFS 64
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
+G G S G+ + + + + L +V G L I+ + P+F D R +
Sbjct: 65 LIFVSIGFGTSLVGRWFSEYQDFIRQIGAILIVVFG---LVIVGIWRPAFLMK-DRRLSF 120
Query: 233 ANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
PS + + G+ FA +PC P+L +++ AT +P G + +Y+ G+ P
Sbjct: 121 QERPSGFFGSIIIGMAFAAGWTPCMGPILMSVVALAAT--NPGSGMLYMFAYSLGFAVPF 178
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
+ + F G L + R+ S + + G +++ G+ F D +
Sbjct: 179 FILSFFIGKLHWI---RRHSEKMVKIGGYVMIAMGVVLFFDWM 218
>gi|319947011|ref|ZP_08021245.1| cytochrome c-type biogenesis protein CcdA [Streptococcus australis
ATCC 700641]
gi|417920700|ref|ZP_12564200.1| cytochrome C biogenesis protein transmembrane region [Streptococcus
australis ATCC 700641]
gi|319747059|gb|EFV99318.1| cytochrome c-type biogenesis protein CcdA [Streptococcus australis
ATCC 700641]
gi|342828128|gb|EGU62504.1| cytochrome C biogenesis protein transmembrane region [Streptococcus
australis ATCC 700641]
Length = 235
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 28/189 (14%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRA-QIIGDSI---------AFSLGLAT 173
+F AG+++ SPC +LP+ +G + GS + ++ QI G I F G++
Sbjct: 10 VFLAGILSFFSPCVFPLLPVYIGVL--LGSDQEKSVQIFGKKIRWHGIVKTLCFIAGISV 67
Query: 174 TLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAA 233
L+G GA G+ L I++GL+ +E+ NF +
Sbjct: 68 IFLLIGFGAGLLGQI--MYTNWFRYLMGALIIILGLHQMEVFHF-------NFLEKQKTM 118
Query: 234 NFPSSVQ------AYLAGLTFALAASPCSTPVLATLLGYVATS-KDPLIGGTLLLSYTTG 286
+F ++ A+L GL F+ +PC PVL ++L A++ +D L+G L YT G
Sbjct: 119 DFGANKHKNELFSAFLLGLGFSFGWTPCIGPVLGSVLALAASNGQDALMGAVYLFIYTLG 178
Query: 287 YVAPLLLAA 295
P LL A
Sbjct: 179 MAIPFLLLA 187
>gi|444375362|ref|ZP_21174656.1| cytochrome c biogenesis protein [Helicobacter pylori A45]
gi|443620134|gb|ELT80586.1| cytochrome c biogenesis protein [Helicobacter pylori A45]
Length = 239
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVVGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|49474352|ref|YP_032394.1| cytochrome c-type biogenesis protein [Bartonella quintana str.
Toulouse]
gi|49239856|emb|CAF26250.1| Cytochrome c-type biogenesis protein [Bartonella quintana str.
Toulouse]
Length = 262
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 84/194 (43%), Gaps = 16/194 (8%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ-----------IIGDSIAFSLGLA 172
+F AG ++ LSPC L ++P L Y+ G R++ ++ IAF LG
Sbjct: 10 VFFAGALSFLSPCVLPLVPPYLCYMAGIGIDDFRSEKHKEKVFIRLALLSSVIAFVLGFT 69
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
T LG AS GK L A + I+ GLN L + ++ F + R
Sbjct: 70 TVFVALGASASTIGKFIAYYREWFVLTAGIIIIIFGLNFLGLFKVA----FLFREARFQT 125
Query: 233 ANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
P+ + AY+ GL FA +PC P+L ++ T + G LL Y G P
Sbjct: 126 HKTPAGPLGAYVIGLAFAFGWTPCIGPILGPVITLAGTKETVGEGAILLGVYALGLGVPF 185
Query: 292 LLAASFAGALQSLL 305
++AA F+ + L
Sbjct: 186 VIAALFSSSFMRFL 199
>gi|385221767|ref|YP_005770900.1| cytochrome c biogenesis protein [Helicobacter pylori SouthAfrica7]
gi|317010546|gb|ADU84293.1| cytochrome c biogenesis protein [Helicobacter pylori SouthAfrica7]
Length = 239
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVIGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASKSNGMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRMIEIISGLVLILMGV 223
>gi|386876313|ref|ZP_10118435.1| cytochrome C biogenesis protein transmembrane region [Candidatus
Nitrosopumilus salaria BD31]
gi|386805889|gb|EIJ65386.1| cytochrome C biogenesis protein transmembrane region [Candidatus
Nitrosopumilus salaria BD31]
Length = 244
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 112/229 (48%), Gaps = 19/229 (8%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYI------------GAFGSGKSRAQIIGDSIAF 167
+LAV AGL + ++PC L ++P L YI G+ +R II +S+ F
Sbjct: 5 TLAVATIAGLGSFVAPCILPMIPAFLAYISGTTLSELSQNSGSNTLSINRTNIILNSVFF 64
Query: 168 SLGLATTLALLGVGA-SFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNF 226
LG + + LGV S + G+ GL + + G+ LL +++ + F
Sbjct: 65 VLGFSVVFSTLGVIINSVLATSVGEFVEGLNQIGGIIIVGFGIFLLLSMKISKLNMEKKF 124
Query: 227 DPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTG 286
P+ + A++P S ++ GL FA+ +PC P+L T+L AT+ P I LLL+Y+ G
Sbjct: 125 FPKRSKASYPMS---FVFGLAFAVGWTPCVGPILGTILTLAATT--PSIAFNLLLAYSLG 179
Query: 287 YVAPLLLAASF-AGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
P +L F + A + + S K + N + G+ ++ G+ F ++L
Sbjct: 180 LGIPFILIGVFYSRATRIIRSMSKHLKYYNVILGSFIIILGILVFTNQL 228
>gi|425433079|ref|ZP_18813618.1| cytochrome C biogenesis protein transmembrane region [Helicobacter
pylori GAM100Ai]
gi|410714383|gb|EKQ71858.1| cytochrome C biogenesis protein transmembrane region [Helicobacter
pylori GAM100Ai]
Length = 240
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 22 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 79
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 80 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 137
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 138 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDTY-GLMLMVVFVMGLAIPFLLVALMLE 195
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 196 RALLFLKSLKKYNRAIEIVSGLVLILMGI 224
>gi|421721180|ref|ZP_16160457.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori R055a]
gi|407225964|gb|EKE95734.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori R055a]
Length = 239
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDTY-GLILMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|159899685|ref|YP_001545932.1| cytochrome C biogenesis transmembrane protein [Herpetosiphon
aurantiacus DSM 785]
gi|159892724|gb|ABX05804.1| cytochrome c biogenesis protein transmembrane region [Herpetosiphon
aurantiacus DSM 785]
Length = 306
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 90/181 (49%), Gaps = 14/181 (7%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSG------KSRAQIIGDSIAFSLGLATTLALL 178
F AG+++ LSPCTL VLP + S + R + I S+AF GLATT+ +L
Sbjct: 49 FMAGVLSFLSPCTLPVLPAYFAWTFGINSAGDESLAQKRQRTIISSLAFFAGLATTMVVL 108
Query: 179 GVGASFAGKAYGQIGTGLPLAAS-GLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
G+ + +A I + L A G I++ + ++ I + F R+++A S
Sbjct: 109 GMAITATSQAIRGISSNKDLFAQIGGVIIIVMGVMSIFGI---GFTGANIKRSSSATVGS 165
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLG-YVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
AYL GLTFAL + C P+L +L ++T + G TL Y G PL++ A+
Sbjct: 166 ---AYLYGLTFALGWTACIGPILGAILTLLISTGASIIAGATLTFIYVLGLALPLMIVAT 222
Query: 297 F 297
F
Sbjct: 223 F 223
>gi|395793323|ref|ZP_10472728.1| hypothetical protein MEI_01349 [Bartonella vinsonii subsp.
arupensis Pm136co]
gi|395431637|gb|EJF97655.1| hypothetical protein MEI_01349 [Bartonella vinsonii subsp.
arupensis Pm136co]
Length = 262
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 97/217 (44%), Gaps = 17/217 (7%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ-----------IIGDSIAFSLGLA 172
+F AG ++ LSPC L ++P L Y+ G R+Q ++ IAF LG
Sbjct: 10 VFFAGALSFLSPCVLPLVPPYLCYMAGIGIDDLRSQKSEGKVFIRRGLLSSVIAFVLGFT 69
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
T LG AS GK G +AA I+ GLN L + ++ F + R
Sbjct: 70 TVFVALGASASTIGKFIGYYRDWFAIAAGITIIIFGLNFLGLFKIA----FLFREARFQT 125
Query: 233 ANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
P+ + AY+ GL FA +PC P+L ++ T + G LL Y G P
Sbjct: 126 HKVPTGPLGAYVIGLAFAFGWTPCIGPILGPVITLAGTKETVGEGALLLGIYALGLGVPF 185
Query: 292 LLAASFA-GALQSLLSFRKFSSWINPMSGALLLGGGL 327
+LAA F+ G ++ L +FR + M G L+ G+
Sbjct: 186 VLAALFSTGFMRFLGAFRIHLGKVEKMIGIFLVVTGI 222
>gi|423713094|ref|ZP_17687354.1| hypothetical protein ME1_00100 [Bartonella vinsonii subsp.
arupensis OK-94-513]
gi|395424720|gb|EJF90900.1| hypothetical protein ME1_00100 [Bartonella vinsonii subsp.
arupensis OK-94-513]
Length = 262
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 97/217 (44%), Gaps = 17/217 (7%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ-----------IIGDSIAFSLGLA 172
+F AG ++ LSPC L ++P L Y+ G R+Q ++ IAF LG
Sbjct: 10 VFFAGALSFLSPCVLPLVPPYLCYMAGIGIDDLRSQKSEGEVFIRRGLLSSVIAFVLGFT 69
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
T LG AS GK G +AA I+ GLN L + ++ F + R
Sbjct: 70 TVFVALGASASTIGKFIGYYRDWFAIAAGITIIIFGLNFLGLFKIA----FLFREARFQT 125
Query: 233 ANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
P+ + AY+ GL FA +PC P+L ++ T + G LL Y G P
Sbjct: 126 HKVPTGPLGAYVIGLAFAFGWTPCIGPILGPVITLAGTKETVGEGALLLGIYALGLGVPF 185
Query: 292 LLAASFA-GALQSLLSFRKFSSWINPMSGALLLGGGL 327
+LAA F+ G ++ L +FR + M G L+ G+
Sbjct: 186 VLAALFSTGFMRFLGAFRIHLGKVEKMIGIFLVVTGI 222
>gi|420486897|ref|ZP_14985505.1| cytochrome c biogenesis protein [Helicobacter pylori Hp P-8]
gi|420520784|ref|ZP_15019215.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-8b]
gi|393104450|gb|EJC05007.1| cytochrome c biogenesis protein [Helicobacter pylori Hp P-8]
gi|393127371|gb|EJC27816.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-8b]
Length = 239
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSIRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDTY-GLILMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|116625806|ref|YP_827962.1| redoxin domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116228968|gb|ABJ87677.1| Redoxin domain protein [Candidatus Solibacter usitatus Ellin6076]
Length = 752
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 12/190 (6%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGV 180
LAV FG GL + +PC ++P+T+ Y SG R I+ ++ F LG+ + LG+
Sbjct: 191 LAVAFGFGLASIFTPCVFPMIPITMSYFVNRQSGGRRESIV-QALVFCLGIVVLFSGLGL 249
Query: 181 GASFAGKAYGQIGTGLPLAASG----LAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
+ +G + G +G L I GL+LL E+ +PS P +A+
Sbjct: 250 ATTAILGPFGIVTLGSNPWVNGFISALFIAFGLSLLGAFEITIPS--SILTPLNKSADKG 307
Query: 237 SSVQAYLAGLTFALAASPCSTPVLATLLGYVAT--SKDPLIGGTLLLSYTTGYVAPLLLA 294
+ + L GLTF+LA+ C P + TLL + PLIG ++++ TG P L
Sbjct: 308 GFLGSLLMGLTFSLASFACVGPFVGTLLAASVSGGKTRPLIG---MVTFATGLALPFFLL 364
Query: 295 ASFAGALQSL 304
A F G L+ +
Sbjct: 365 AVFPGYLKRM 374
>gi|86157453|ref|YP_464238.1| cytochrome c biogenesis protein, transmembrane region
[Anaeromyxobacter dehalogenans 2CP-C]
gi|85773964|gb|ABC80801.1| cytochrome c biogenesis protein, transmembrane region
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 232
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 12/205 (5%)
Query: 129 LVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKA 188
L +LSPC LS +PL + Y+ S +G S +F+LG+ ++A +GV G+
Sbjct: 29 LSVALSPCHLSSIPLVVAYMNGGREPPSVRAALGLSTSFALGILASIAAVGVATVLLGRM 88
Query: 189 YGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTF 248
G +G A + + +GLNLL + L LPS+ PR+A P + A + G F
Sbjct: 89 AGDVGPAGNYALAAVFFAVGLNLLGV--LPLPSW---SVPRSAGRRGP--LGALVLGAIF 141
Query: 249 ALAASPCSTPVLATLLG--YVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLS 306
A PC+ +A LLG + A+ D GG L+ +Y G+ +++A + +Q LS
Sbjct: 142 GAALGPCTFAFMAPLLGLAFRASGADAARGGLLVAAYAIGHTLAIVVAGASVQGVQRWLS 201
Query: 307 FR---KFSSWINPMSGALLLGGGLY 328
+ + ++ + ++G ++ GG +
Sbjct: 202 WSAGGRAAAVLRSVAGVAVIAGGAW 226
>gi|420421666|ref|ZP_14920744.1| cytochrome c biogenesis protein [Helicobacter pylori NQ4110]
gi|393038184|gb|EJB39218.1| cytochrome c biogenesis protein [Helicobacter pylori NQ4110]
Length = 239
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRVIEIVSGLVLILMGI 223
>gi|158424573|ref|YP_001525865.1| cytochrome c biogenesis protein [Azorhizobium caulinodans ORS 571]
gi|158331462|dbj|BAF88947.1| cytochrome c biogenesis protein [Azorhizobium caulinodans ORS 571]
Length = 273
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 95/216 (43%), Gaps = 16/216 (7%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGA-----FGSGKSRAQIIGDS----IAFSL 169
SL F AGL + LSPC L ++P L YIG + + Q+ + + F
Sbjct: 34 VSLPAAFLAGLASFLSPCVLPLVPPYLCYIGGATLDDLTNAEPLRQVARRAFYGAVLFVS 93
Query: 170 GLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR 229
G LLG GAS G L L A I+MGLN L + + F + R
Sbjct: 94 GFTVVFVLLGAGASAIGNVLRAHLDTLSLIAGIAIILMGLNFLGVFRIA----FLSRTAR 149
Query: 230 AAAANFPSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYV 288
A A P+ V A++ GL FA +PC PVL +L + G LL Y+ G
Sbjct: 150 AHVAE-PTGVWGAFVMGLAFAFGWTPCLGPVLGAILAVAGSEATVTKGAALLAVYSAGLG 208
Query: 289 APLLLAA-SFAGALQSLLSFRKFSSWINPMSGALLL 323
P LLAA + L+SL R+F + + G +L+
Sbjct: 209 VPFLLAALAVRPFLKSLTHMRRFLPVVEKVMGGVLV 244
>gi|384892321|ref|YP_005766414.1| cytochrome c biogenesis protein [Helicobacter pylori Cuz20]
gi|308061618|gb|ADO03506.1| cytochrome c biogenesis protein [Helicobacter pylori Cuz20]
Length = 239
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVVGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGV 223
>gi|237741770|ref|ZP_04572251.1| cytochrome c-type biogenesis protein ccdA [Fusobacterium sp.
4_1_13]
gi|294785614|ref|ZP_06750902.1| cytochrome c-type biogenesis protein CcdA [Fusobacterium sp.
3_1_27]
gi|229429418|gb|EEO39630.1| cytochrome c-type biogenesis protein ccdA [Fusobacterium sp.
4_1_13]
gi|294487328|gb|EFG34690.1| cytochrome c-type biogenesis protein CcdA [Fusobacterium sp.
3_1_27]
Length = 218
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 107/213 (50%), Gaps = 19/213 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAG 186
AG+ + SPC ++P+ YI +G+ ++ + ++AF LGL+ T +LG GA G
Sbjct: 14 AGVASFFSPCIFPIIPV---YISILSNGEKKS--LSKTLAFVLGLSVTYIVLGFGAGVIG 68
Query: 187 KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQA----Y 242
+ + + + + + +++GL +EI++L+ F + N+ Q+ +
Sbjct: 69 DLF--LNSKVRIIGGIIVVILGLFQMEILKLK-------FLEKTKIMNYEGENQSIFSTF 119
Query: 243 LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQ 302
L GLTF+L +PC P+LA++L ++S D L+ Y G P ++ + + AL
Sbjct: 120 LLGLTFSLGWTPCVGPILASILILASSSGDTTNSVMLMFIYLLGMATPFMIFSLASKALF 179
Query: 303 SLLSF-RKFSSWINPMSGALLLGGGLYTFLDRL 334
+SF +K+ I + G L++ G D+L
Sbjct: 180 KKMSFIKKYLPTIKKVGGFLIIIMGFLLIFDKL 212
>gi|420419854|ref|ZP_14918942.1| cytochrome c biogenesis protein [Helicobacter pylori NQ4161]
gi|420429962|ref|ZP_14928992.1| cytochrome c biogenesis protein [Helicobacter pylori Hp A-20]
gi|420441634|ref|ZP_14940579.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-36]
gi|420444908|ref|ZP_14943822.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-42]
gi|420453104|ref|ZP_14951943.1| cytochrome c biogenesis protein [Helicobacter pylori Hp A-8]
gi|393039220|gb|EJB40252.1| cytochrome c biogenesis protein [Helicobacter pylori NQ4161]
gi|393048581|gb|EJB49548.1| cytochrome c biogenesis protein [Helicobacter pylori Hp A-20]
gi|393059763|gb|EJB60638.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-36]
gi|393063102|gb|EJB63949.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-42]
gi|393070712|gb|EJB71501.1| cytochrome c biogenesis protein [Helicobacter pylori Hp A-8]
Length = 239
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLILMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|261419544|ref|YP_003253226.1| cytochrome C biogenesis protein transmembrane region [Geobacillus
sp. Y412MC61]
gi|319766360|ref|YP_004131861.1| cytochrome c biogenesis transmembrane protein [Geobacillus sp.
Y412MC52]
gi|261376001|gb|ACX78744.1| cytochrome c biogenesis protein transmembrane region [Geobacillus
sp. Y412MC61]
gi|317111226|gb|ADU93718.1| cytochrome c biogenesis protein transmembrane region protein
[Geobacillus sp. Y412MC52]
Length = 235
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 102/223 (45%), Gaps = 17/223 (7%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ-------IIGDSIAFSLGLA 172
+L + FGAG ++ +SPC L + P L YI + + + + ++ F LG +
Sbjct: 5 NLFLAFGAGFLSFISPCCLPLYPAFLSYITGVSVSELKEENAMLNRRSLWHTLCFLLGFS 64
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
LG G S G+ + + + + + +G L + L P+F D R +
Sbjct: 65 LIFISLGFGTSLLGRLFVDYQDAIRQIGAVVIVALG---LVVAGLWKPAFLLK-DRRISF 120
Query: 233 ANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
PS V + L G+ FA +PC P+L ++ AT +P G +L+YT G+ P
Sbjct: 121 RERPSGYVGSVLIGMAFAAGWTPCMGPILVAVVALAAT--NPGSGMVYMLAYTLGFAVPF 178
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
+ + F G LQ + R+ S+ I G +++ G+ + D +
Sbjct: 179 FMLSFFIGKLQWI---RRHSASIMKAGGYVMVAMGVVLYFDWM 218
>gi|420476949|ref|ZP_14975611.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-23]
gi|393094554|gb|EJB95162.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-23]
Length = 239
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLILMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|420435591|ref|ZP_14934590.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-27]
gi|393051450|gb|EJB52401.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-27]
Length = 239
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGV 223
>gi|420480305|ref|ZP_14978949.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-1]
gi|420510753|ref|ZP_15009242.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-1b]
gi|393098218|gb|EJB98810.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-1]
gi|393121261|gb|EJC21744.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-1b]
Length = 239
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLILMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|420416477|ref|ZP_14915586.1| cytochrome c biogenesis protein [Helicobacter pylori NQ4044]
gi|420495599|ref|ZP_14994163.1| cytochrome c biogenesis protein [Helicobacter pylori Hp P-23]
gi|393036906|gb|EJB37944.1| cytochrome c biogenesis protein [Helicobacter pylori NQ4044]
gi|393111910|gb|EJC12431.1| cytochrome c biogenesis protein [Helicobacter pylori Hp P-23]
Length = 239
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|34762439|ref|ZP_00143439.1| Cytochrome c-type biogenesis protein ccdA [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
gi|421144984|ref|ZP_15604884.1| cytochrome C-type biogenesis protein ccdA [Fusobacterium nucleatum
subsp. fusiforme ATCC 51190]
gi|27887907|gb|EAA24975.1| Cytochrome c-type biogenesis protein ccdA [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
gi|395488625|gb|EJG09480.1| cytochrome C-type biogenesis protein ccdA [Fusobacterium nucleatum
subsp. fusiforme ATCC 51190]
Length = 218
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 107/213 (50%), Gaps = 19/213 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAG 186
AG+ + SPC ++P+ YI +G+ ++ + ++AF LGL+ T +LG GA G
Sbjct: 14 AGVASFFSPCIFPIIPV---YISILSNGEKKS--LSKTLAFVLGLSVTYIVLGFGAGVIG 68
Query: 187 KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQA----Y 242
+ + + + + + +++GL +EI++L+ F + N+ Q+ +
Sbjct: 69 DLF--LNSKVRIIGGIIVVILGLFQMEILKLK-------FLEKTKIMNYEGENQSIFSTF 119
Query: 243 LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQ 302
L GLTF+L +PC P+LA++L ++S D L+ Y G P ++ + + AL
Sbjct: 120 LLGLTFSLGWTPCVGPILASILILASSSGDTTNSVMLMFIYLLGMATPFMIFSLASKALF 179
Query: 303 SLLSF-RKFSSWINPMSGALLLGGGLYTFLDRL 334
+SF +K+ I + G L++ G D+L
Sbjct: 180 KKMSFIKKYLPTIKKVGGFLIIIMGFLLIFDKL 212
>gi|420503832|ref|ZP_15002362.1| cytochrome c biogenesis protein [Helicobacter pylori Hp P-62]
gi|393155221|gb|EJC55498.1| cytochrome c biogenesis protein [Helicobacter pylori Hp P-62]
Length = 239
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|421714437|ref|ZP_16153758.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori R036d]
gi|407218122|gb|EKE87951.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori R036d]
Length = 239
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|392543443|ref|ZP_10290580.1| thiol--disulfide interchange protein [Pseudoalteromonas piscicida
JCM 20779]
Length = 223
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 94/199 (47%), Gaps = 29/199 (14%)
Query: 128 GLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGK 187
G++TS +PC +LP+T+ + + I I ++LG A A LG A+ G
Sbjct: 27 GVLTSFTPCVYPILPITVATL------SQQRHIRLAPIWYALGFAAVYAALGFIAALTGS 80
Query: 188 AYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFD------PRAAAANFPSSVQA 241
+GQ+ T + +++ NLL +F PR A SS
Sbjct: 81 FFGQVAT------NPWVLLIFANLLL--------YFAAVSKGLISLPRLPNAISTSSPAP 126
Query: 242 YLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGAL 301
L G+ AL A+PC++P+L LL +VA ++ PL+GG LL S+ G LLLA L
Sbjct: 127 LLMGMASALVAAPCTSPILGGLLLFVANAQQPLLGGALLFSFALGMSTLLLLAGLSTRFL 186
Query: 302 QSLLSFRKFSSWINPMSGA 320
+L + +W+N ++ A
Sbjct: 187 HTL---PRSGAWLNQITTA 202
>gi|450050255|ref|ZP_21840174.1| putative cytochrome C biogenesis protein [Streptococcus mutans
NFSM1]
gi|449202873|gb|EMC03762.1| putative cytochrome C biogenesis protein [Streptococcus mutans
NFSM1]
Length = 230
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-------SIAFS 168
L ++ +F GL++ SPC L +LP+ +G + G K +II D + F
Sbjct: 3 LQHITILTLFIEGLLSFFSPCVLPILPVYIGILAGQGEEKQSGEIIWDRRKVFTNTFLFI 62
Query: 169 LGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
G+A T +L +S + +G G+ L ++MGL + +I+ S F N +
Sbjct: 63 SGIAATFFILAFASSLISQFLQNLG-GI------LILIMGLVQVGLIK----SHFFNREY 111
Query: 229 RAAAANFPSSVQ-----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSY 283
A + + + A+L G TF+ + +PC P+LA++ Y +T + + L+L Y
Sbjct: 112 SAKNKVYQAGQKVTPLIAFLMGFTFSFSWTPCIGPILASVFLYASTHQG-IYSVLLILIY 170
Query: 284 TTGYVAPLLLAASFAGALQSLLSFRK 309
G+V P L A F+ + S+ +K
Sbjct: 171 CLGFVIPFALIALFSQRVMSVFKKQK 196
>gi|434385103|ref|YP_007095714.1| cytochrome c biogenesis protein [Chamaesiphon minutus PCC 6605]
gi|428016093|gb|AFY92187.1| cytochrome c biogenesis protein [Chamaesiphon minutus PCC 6605]
Length = 228
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGL----ATTL 175
S+ + FG G+VT LSPC L VLP+ +G +S IA LGL A T
Sbjct: 7 SIGLAFGGGIVTVLSPCILPVLPIIVG--------RSLQSHHYGPIAIVLGLVGGFAITG 58
Query: 176 ALLGVGASFAGKAYGQIGTGLP--LAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAA 233
+LLGV AS+ LP L A +AI++ + + I FF F + ++
Sbjct: 59 SLLGVVASWI--------PNLPDALRAVAIAILLVMGVFSIFPEWGYRFFQIFSIKIDSS 110
Query: 234 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
N V + G L +PC+ PVLA++L A PL +L+ Y G P+L+
Sbjct: 111 NSIGLVGEFWLGSQLGLLWTPCAGPVLASILLLAAVQHQPLQAFGMLVVYGLGAAVPMLV 170
Query: 294 AASFAGAL-QSLLSFRKFSSWINPMSGALLL 323
A L Q LL R S I + G +++
Sbjct: 171 VAYGGRYLGQRLLQLRSHSGTIQKIGGMMII 201
>gi|299131702|ref|ZP_07024897.1| cytochrome c biogenesis protein transmembrane region [Afipia sp.
1NLS2]
gi|298591839|gb|EFI52039.1| cytochrome c biogenesis protein transmembrane region [Afipia sp.
1NLS2]
Length = 244
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 80/181 (44%), Gaps = 19/181 (10%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYI---------GAFGSGKSRAQIIGDSIAFSLGLATTLAL 177
AG V+ LSPC L ++P L Y+ SR ++ ++ F LG +T
Sbjct: 13 AGFVSFLSPCVLPLVPAYLVYLTGATVEHVASEEKPAASRRAVLLCALLFVLGFSTVFVG 72
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
LG AS G A + L + A + IVMGL+ L + ++ F R P
Sbjct: 73 LGASASVVGSALRRWSAELSIVAGLVIIVMGLHFLGLTRIR-------FLMREGRIPIPK 125
Query: 238 SVQ---AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
V AY+ GL FA +PC PVLA +L A+ G LL Y+ G P +LA
Sbjct: 126 PVGLWGAYVMGLAFAFGWTPCIGPVLAAILSIAASENTVQKGALLLAVYSAGLGIPFMLA 185
Query: 295 A 295
A
Sbjct: 186 A 186
>gi|108562692|ref|YP_627008.1| cytochrome c biogenesis protein [Helicobacter pylori HPAG1]
gi|107836465|gb|ABF84334.1| cytochrome c biogenesis protein [Helicobacter pylori HPAG1]
Length = 240
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 22 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 79
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 80 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 137
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 138 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDA-YGLMLMVVFVMGLAIPFLLVALMLE 195
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 196 RALLFLKSLKKYNRAIEIVSGLVLILMGI 224
>gi|148265758|ref|YP_001232464.1| cytochrome c biogenesis transmembrane protein [Geobacter
uraniireducens Rf4]
gi|146399258|gb|ABQ27891.1| cytochrome c biogenesis protein, transmembrane region [Geobacter
uraniireducens Rf4]
Length = 246
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 96/222 (43%), Gaps = 17/222 (7%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFG---------SGKSRAQIIGDSIAFSLGLATTL 175
F AG ++ LSPC L ++P + YI S K R Q I S+ F G
Sbjct: 16 FIAGFLSFLSPCVLPLIPSYITYITGLSFSDLQMEHPSHKVRQQTIIHSLLFIAGFTFVF 75
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LLG A+F G T L L +V G+++ I ++ + A F
Sbjct: 76 VLLGASATFIGGFLQAHMTALRRVGGVLIVVFGIHVSGIFDIGVLLGEKRLTLHRKPAGF 135
Query: 236 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
S ++ G+ FA +PC P+LA++L AT G LLL+Y+ G P LA+
Sbjct: 136 FGS---FVVGVAFAAGWTPCIGPILASILMVAATESTVYRGIGLLLAYSMGLAIPFFLAS 192
Query: 296 SFAGALQSLLSFRKFSSWI---NPMSGALLLGGGLYTFLDRL 334
Q L+ F +F +I ++G L+ G+ F + L
Sbjct: 193 --LAMHQFLVLFTRFKKYIRIFEIVTGVFLIIVGILIFTNYL 232
>gi|157164820|ref|YP_001467116.1| divalent cation transporter [Campylobacter concisus 13826]
gi|112801417|gb|EAT98761.1| thiol:disulfide interchange protein DsbD (Protein-disulfide
reductase) (Disulfide reductase) [Campylobacter concisus
13826]
Length = 575
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 99/201 (49%), Gaps = 8/201 (3%)
Query: 106 NEAVLGQLSALSF-TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDS 164
+++ +LS+ +F SL FG GL+ SL+PC ++P+ I + G + + S
Sbjct: 159 EQSIANELSSKNFFISLVTFFGYGLLLSLTPCVFPMIPILSSIIVSKGGSLNAKKGFLLS 218
Query: 165 IAFSLGLATTLALLGVGASFAGKAYGQIGTGLPL----AASGLAIVMGLNLLEIIELQLP 220
+ + + ++ AL GVGAS G +G G + A + + +++ ++ +++LP
Sbjct: 219 LVYVVAMSLAYALAGVGASLLG--FGIAGALQNIYVLGAFAAIFVILSFSMFGFYDIKLP 276
Query: 221 SFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLL 280
S F+N + + N + ++ G AL SPC LA L Y+A S D + GG +L
Sbjct: 277 SKFENLISK-KSQNSSGLIGVFIMGFASALIVSPCVAAPLAGALLYIAQSGDAIYGGIML 335
Query: 281 LSYTTGYVAPLLLAASFAGAL 301
G APLL+ +G L
Sbjct: 336 FVMGLGMGAPLLVIGLSSGKL 356
>gi|56419874|ref|YP_147192.1| cytochrome c biogenesis protein [Geobacillus kaustophilus HTA426]
gi|297530486|ref|YP_003671761.1| cytochrome C biogenesis protein transmembrane region [Geobacillus
sp. C56-T3]
gi|375008319|ref|YP_004981952.1| cytochrome c-type biogenesis protein CcdA [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|448237493|ref|YP_007401551.1| thiol-disulfide oxidoreductase [Geobacillus sp. GHH01]
gi|56379716|dbj|BAD75624.1| cytochrome c biogenesis protein [Geobacillus kaustophilus HTA426]
gi|297253738|gb|ADI27184.1| cytochrome c biogenesis protein transmembrane region [Geobacillus
sp. C56-T3]
gi|359287168|gb|AEV18852.1| Cytochrome c-type biogenesis protein CcdA [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|445206335|gb|AGE21800.1| thiol-disulfide oxidoreductase [Geobacillus sp. GHH01]
Length = 235
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 102/223 (45%), Gaps = 17/223 (7%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ-------IIGDSIAFSLGLA 172
+L + FGAG ++ +SPC L + P L YI + + + + ++ F LG +
Sbjct: 5 NLFLAFGAGFLSFISPCCLPLYPAFLSYITGVSVSELKEENAMLNRRSLWHTLCFLLGFS 64
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
LG G S G+ + + + + + +G L + L P+F D R +
Sbjct: 65 LIFISLGFGTSLLGRLFVDYQDAIRQIGAVVIVALG---LVVAGLWKPAFLLK-DRRISF 120
Query: 233 ANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
PS V + L G+ FA +PC P+L ++ AT +P G +L+YT G+ P
Sbjct: 121 RERPSGYVGSVLIGMAFAAGWTPCMGPILVAVVALAAT--NPGSGMMYMLAYTLGFAVPF 178
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
+ + F G LQ + R+ S+ I G +++ G+ + D +
Sbjct: 179 FMLSFFIGKLQWI---RRHSASIMKAGGYVMVAMGVVLYFDWM 218
>gi|385229578|ref|YP_005789494.1| cytochrome c biogenesis protein [Helicobacter pylori Puno135]
gi|344336016|gb|AEN17977.1| cytochrome c biogenesis protein [Helicobacter pylori Puno135]
Length = 239
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 104/211 (49%), Gaps = 18/211 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
G S A + + + A G+ I+ GL+ L + + R A+ + +S+Q
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASKS--NSIQ 134
Query: 241 A---YLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-S 296
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 135 RFYPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVVGLAIPFLLVALM 192
Query: 297 FAGALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 193 LERALLFLKSLKKYNRTIEIVSGLVLILMGV 223
>gi|420493626|ref|ZP_14992197.1| cytochrome c biogenesis protein [Helicobacter pylori Hp P-16]
gi|393112882|gb|EJC13402.1| cytochrome c biogenesis protein [Helicobacter pylori Hp P-16]
Length = 239
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIISGLVLVLMGI 223
>gi|420490295|ref|ZP_14988881.1| cytochrome c biogenesis protein [Helicobacter pylori Hp P-13]
gi|420524127|ref|ZP_15022537.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-13b]
gi|393109638|gb|EJC10169.1| cytochrome c biogenesis protein [Helicobacter pylori Hp P-13]
gi|393133286|gb|EJC33703.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-13b]
Length = 239
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLILMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRTIEIVSGLVLILMGI 223
>gi|385248813|ref|YP_005777032.1| cytochrome c biogenesis protein [Helicobacter pylori F57]
gi|420402236|ref|ZP_14901427.1| cytochrome c biogenesis protein [Helicobacter pylori CPY6081]
gi|420405132|ref|ZP_14904312.1| cytochrome c biogenesis protein [Helicobacter pylori CPY6271]
gi|317181608|dbj|BAJ59392.1| cytochrome c biogenesis protein [Helicobacter pylori F57]
gi|393018055|gb|EJB19207.1| cytochrome c biogenesis protein [Helicobacter pylori CPY6081]
gi|393025002|gb|EJB26112.1| cytochrome c biogenesis protein [Helicobacter pylori CPY6271]
Length = 239
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASESNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVVGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|387781952|ref|YP_005792665.1| cytochrome c biogenesis protein [Helicobacter pylori 51]
gi|261837711|gb|ACX97477.1| cytochrome c biogenesis protein [Helicobacter pylori 51]
Length = 240
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 22 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 79
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 80 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASESNSMQRF 137
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 138 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVAGLAIPFLLVALMLE 195
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 196 RALLFLKSLKKYNRAIEIVSGLVLILMGI 224
>gi|420478728|ref|ZP_14977380.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-34]
gi|393096283|gb|EJB96881.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-34]
Length = 239
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLILMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRTIEIVSGLVLILMGI 223
>gi|259416109|ref|ZP_05740029.1| cytochrome c biogenesis protein CcdA [Silicibacter sp. TrichCH4B]
gi|259347548|gb|EEW59325.1| cytochrome c biogenesis protein CcdA [Silicibacter sp. TrichCH4B]
Length = 292
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 91/213 (42%), Gaps = 13/213 (6%)
Query: 91 GDMFGGFLYSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGA 150
GD GF Y+ E + L F +L G+V+ LSPC L ++P L Y+
Sbjct: 31 GDAADGFDYADDMFGIEIIDASLLPAMFVALV----GGIVSFLSPCVLPIVPPYLAYMSG 86
Query: 151 F------GSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLA 204
G+ +R + I ++ F +GL+T LLG AS G Q A+ +
Sbjct: 87 VTIGEIQGTAAARRKAILAALFFVMGLSTVFLLLGFTASAFGAFVLQNQELFAKASGVVV 146
Query: 205 IVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLL 264
IV GL+ L + + L D S++ AY+ GL FA +PC P L +L
Sbjct: 147 IVFGLHFLSVFRIPL---LDREARMETGETGGSALGAYVLGLAFAFGWTPCIGPQLGAIL 203
Query: 265 GYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
A+ G LL Y G P LLAA F
Sbjct: 204 SLAASEASVSRGTILLGVYALGLGVPFLLAAVF 236
>gi|149926597|ref|ZP_01914857.1| Protein-disulfide reductase [Limnobacter sp. MED105]
gi|149824526|gb|EDM83742.1| Protein-disulfide reductase [Limnobacter sp. MED105]
Length = 632
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 120/243 (49%), Gaps = 21/243 (8%)
Query: 101 AGQQANEA--VLGQLSALSF-TSLAVIFGAGLVTSLSPCTLSVLPLTLGYI-----GAFG 152
AG A+EA + +L+A S+ L V FG GL+ + +PCTL +LP+ + G+ G
Sbjct: 185 AGLPADEAGDLASRLAAQSWLVVLPVFFGLGLLLAFTPCTLPMLPIVSSLVVGQQAGSHG 244
Query: 153 SGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPL--AASGLAIVMGLN 210
+GK++ + ++ + LG+A T ALLGV A G++ P+ A G+ ++G+
Sbjct: 245 AGKAKPMAL--ALVYVLGMALTYALLGVLAGLTGQSLVMAMQQPPVLWAFGGVLAMLGVA 302
Query: 211 LLEIIELQLPSFFDNF----DPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGY 266
LL LQLP+ F + R F + + G+ AL PC P LA L Y
Sbjct: 303 LLMGYSLQLPASFQGWLQEKTGRLKGGQF---IPVLVMGVLSALLLGPCVAPPLAGALLY 359
Query: 267 VATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGG 326
+ + D ++GG L G PL+L A+ AGA + SW++ G +LL
Sbjct: 360 IGQTGDAVLGGAALFLLALGMGLPLVLFAAGAGAALPKAG--AWMSWVSAAFGFVLLAVA 417
Query: 327 LYT 329
++T
Sbjct: 418 VWT 420
>gi|254778968|ref|YP_003057073.1| Cytochrome C biogenesis protein; membrane protein [Helicobacter
pylori B38]
gi|254000879|emb|CAX28815.1| Cytochrome C biogenesis protein; putative membrane protein
[Helicobacter pylori B38]
Length = 240
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 22 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 79
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 80 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASKSNSMQRF 137
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 138 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDTY-GLILMVVFVMGLAIPFLLVALMLE 195
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 196 RALLFLKSLKKYNRAIEIVSGLVLILMGI 224
>gi|414155490|ref|ZP_11411802.1| hypothetical protein HMPREF9186_00222 [Streptococcus sp. F0442]
gi|410873463|gb|EKS21398.1| hypothetical protein HMPREF9186_00222 [Streptococcus sp. F0442]
Length = 235
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 18/184 (9%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGY---------IGAFGSGKSRAQIIGDSIAFSLGLATT 174
+F AG+++ SPC +LP+ +G I FG K R I ++ F G++
Sbjct: 10 VFLAGILSFFSPCVFPLLPVYIGVLLGSDQEKSIQIFGK-KIRWHGIVKTLCFIAGISVI 68
Query: 175 LALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAAN 234
++G GA G+ L I++GL+ +E+ SF + AN
Sbjct: 69 FLIIGFGAGLLGQV--MYTNWFRYVMGALIIILGLHQMEVFHF---SFLEKQKTMDFGAN 123
Query: 235 FPSS--VQAYLAGLTFALAASPCSTPVLATLLGYVATS-KDPLIGGTLLLSYTTGYVAPL 291
+ A+L GL F+ +PC PVL ++L A++ +D L+G L YT G P
Sbjct: 124 KHKNELFSAFLLGLGFSFGWTPCIGPVLGSVLALAASNGQDALVGALYLFIYTLGMAIPF 183
Query: 292 LLAA 295
LL A
Sbjct: 184 LLLA 187
>gi|420458145|ref|ZP_14956955.1| cytochrome c biogenesis protein [Helicobacter pylori Hp A-26]
gi|393075666|gb|EJB76420.1| cytochrome c biogenesis protein [Helicobacter pylori Hp A-26]
Length = 239
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|24372287|ref|NP_716329.1| protein-disulfide reductase DsbD [Shewanella oneidensis MR-1]
gi|24346217|gb|AAN53774.1| protein-disulfide reductase DsbD [Shewanella oneidensis MR-1]
Length = 610
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
+L + FG G+ +L+PC + P+ G I G S A+ S+A+ G+A T ++LG
Sbjct: 200 TLVIFFGLGIGLALTPCVFPMYPILSGIIVGQGQKLSTAKAFTLSMAYVQGMAITYSILG 259
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAI---VMGLNLLEIIELQLPSFF-DNFDPRAAAANF 235
+ + AG Y Q P LAI V+ L++ + +L+LPS F + + +
Sbjct: 260 LVVASAGMKY-QAALQHPAVLVVLAILFFVLSLSMFGLYDLKLPSRFQEKMNSISNNQKG 318
Query: 236 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
+ + +L G+ L ASPC+T L+ L YVA + D L G L + G PLL+
Sbjct: 319 GNLIGVFLMGVISGLVASPCTTAPLSGALVYVAQTGDLLQGFLALYVLSMGMGVPLLIIG 378
Query: 296 SFAGALQSLLSFRKFSSWIN 315
+ G L + +W+N
Sbjct: 379 TSGGKL-----LPRAGAWMN 393
>gi|357011951|ref|ZP_09076950.1| cytochrome c biogenesis protein transmembrane region [Paenibacillus
elgii B69]
Length = 235
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 92/197 (46%), Gaps = 14/197 (7%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGK---------SRAQIIGDSIAFSLG 170
++ + AG V+ +SPC L + P L YI GK R ++I +++F LG
Sbjct: 4 NIWIALWAGFVSFISPCCLPLYPSYLSYITGVSVGKLKDEQSAKEVRFKLITHTLSFILG 63
Query: 171 LATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRA 230
+ LG+GA+ A+ L ++ + VMGL LL I + Q ++
Sbjct: 64 FSIIFYTLGLGANVIANAFLDYRDLLRQISAIMIFVMGLFLLGIFQPQWLMRERKLQIKS 123
Query: 231 AAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAP 290
A + S+ L G+ FA SPC P+L+ +L AT + + L+ +Y+ G+ P
Sbjct: 124 KPAGYLGSL---LIGIGFAAGWSPCIGPILSAMLMLAATEPNSWL--PLISAYSLGFAIP 178
Query: 291 LLLAASFAGALQSLLSF 307
+ A F G+ + +L +
Sbjct: 179 FFILAFFIGSTKWILKY 195
>gi|373857402|ref|ZP_09600144.1| cytochrome c biogenesis protein transmembrane region [Bacillus sp.
1NLA3E]
gi|372453052|gb|EHP26521.1| cytochrome c biogenesis protein transmembrane region [Bacillus sp.
1NLA3E]
Length = 235
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 106/227 (46%), Gaps = 17/227 (7%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ-------IIGDSIAFS 168
+S ++ V GAG ++ +SPC L + P L YI G+ +++ + ++ F
Sbjct: 1 MSDVNIFVALGAGFLSFISPCCLPLYPAFLSYITGMSVGEIKSENAMLQKRSLLHTLFFL 60
Query: 169 LGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
+G + +G G SF G+ + Q + + + GL ++ I + P F +
Sbjct: 61 VGFSIIFLAIGFGTSFIGRFFIQYQDLIRQIGAIFIVGFGLVIVGIFQ---PEFLMK-ER 116
Query: 229 RAAAANFPSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGY 287
R N PS + L G+ FA +PC+ P+L +++ A+ +P G +++Y G+
Sbjct: 117 RFELKNRPSGFAGSILIGMAFAAGWTPCTGPILVSVIALAAS--NPGSGLAYMIAYILGF 174
Query: 288 VAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
P + + F G +Q + RK + I + G +++ G+ F D +
Sbjct: 175 AIPFFILSFFIGKMQWI---RKHNLIIMKIGGYIMIAMGVILFFDWM 218
>gi|417915187|ref|ZP_12558808.1| putative cytochrome C-type biogenesis protein CcdA [Streptococcus
mitis bv. 2 str. SK95]
gi|342835301|gb|EGU69552.1| putative cytochrome C-type biogenesis protein CcdA [Streptococcus
mitis bv. 2 str. SK95]
Length = 236
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 103/227 (45%), Gaps = 37/227 (16%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQI-----------IGDSIAFSLGLA 172
+F AG+++ SPC L +LP+ Y G K+ AQ + ++AF G++
Sbjct: 10 VFLAGILSFFSPCILPLLPV---YAGVLLDDKNDAQASSGKFSISLVSLLRTLAFIAGIS 66
Query: 173 TTLALLGVGASFAGK----AYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
LLG GA F G ++ Q TG + I++GL+ +E++ LQ
Sbjct: 67 FIFILLGYGAGFLGNLLYASWFQYVTG------AVIILLGLHQMEVLHLQGLYKERRLQL 120
Query: 229 RAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAT-SKDPLIGGTLLLSYTTGY 287
+ N QA+L GLTF+ A +PC PVL ++L A+ G L+L YT G
Sbjct: 121 KRQDQNANGYSQAFLLGLTFSFAWTPCVGPVLGSVLALAASGGSGAWQGAGLMLVYTLGL 180
Query: 288 VAPLL---LAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFL 331
P L LA+S+ L FRK ++P G L GG L
Sbjct: 181 ALPFLVLALASSYV-----LKHFRK----LHPYLGTLKKVGGFLIIL 218
>gi|160878989|ref|YP_001557957.1| cytochrome c biogenesis protein transmembrane region [Clostridium
phytofermentans ISDg]
gi|160427655|gb|ABX41218.1| cytochrome c biogenesis protein transmembrane region [Clostridium
phytofermentans ISDg]
Length = 224
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 10/209 (4%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGA 182
+ F G++T LSPC L +LPL L YI S +++ + ++ F G + T LG A
Sbjct: 5 ITFLEGIITFLSPCLLPMLPLYLTYIAGRPSERTKHGTLYAALGFITGFSITFISLGAFA 64
Query: 183 SFAGK---AYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
G+ YGQI + + + + I GL+ L I ++L + + F SV
Sbjct: 65 GTLGRFIIRYGQI---INIVSGSIIIFFGLSYLGIFRIKLFNGALKLKSEHQSHGFFPSV 121
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
L G+ F++ +PC L + L A S L G +L +YT G P L +A
Sbjct: 122 ---LLGIIFSVGWTPCVGTFLGSALVMAAQSGSALKGFFMLSAYTLGLGIPFLFSALLID 178
Query: 300 ALQSLLSF-RKFSSWINPMSGALLLGGGL 327
L+S F +K IN ++G LL+ GL
Sbjct: 179 QLKSAFDFIKKHYKVINMIAGILLIVIGL 207
>gi|449880680|ref|ZP_21783998.1| putative cytochrome C biogenesis protein [Streptococcus mutans
SA38]
gi|449924464|ref|ZP_21799655.1| putative cytochrome C biogenesis protein [Streptococcus mutans
4SM1]
gi|449162715|gb|EMB65838.1| putative cytochrome C biogenesis protein [Streptococcus mutans
4SM1]
gi|449252701|gb|EMC50673.1| putative cytochrome C biogenesis protein [Streptococcus mutans
SA38]
Length = 237
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-------SIAFS 168
L ++ +F GL++ SPC L +LP+ +G + G K +II D + F
Sbjct: 3 LQHITILTLFIEGLLSFFSPCVLPILPVYIGILAGQGEEKQSGEIIWDRRKVFTNTFLFI 62
Query: 169 LGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
G+A T +L +S + L L ++MGL + +I+ S F N +
Sbjct: 63 SGIAATFFILAFASSLISRFLQSHIQFLQNLGGILILIMGLVQVGLIK----SHFFNREY 118
Query: 229 RAAAANFPSSVQ-----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSY 283
A + + + A+L G TF+ + +PC P+LA++ Y +T + + L+L Y
Sbjct: 119 SAKNKVYQAGQKVTPLIAFLMGFTFSFSWTPCIGPILASVFLYASTHQG-IYSVLLILIY 177
Query: 284 TTGYVAPLLLAASFAGALQSLLSFRK 309
G+V P L A F+ + S+ +K
Sbjct: 178 CLGFVIPFALIALFSQRIMSVFKKQK 203
>gi|386315071|ref|YP_006011236.1| Protein-disulfide reductase [Shewanella putrefaciens 200]
gi|319427696|gb|ADV55770.1| Protein-disulfide reductase [Shewanella putrefaciens 200]
Length = 604
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
+L + FG G+ +L+PC + P+ G I G S A+ S+A+ G+A T +LLG
Sbjct: 194 TLVIFFGLGIGLALTPCVFPMYPILSGIIVGQGQKLSTAKAFTLSMAYVQGMAITYSLLG 253
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAI---VMGLNLLEIIELQLPSFF-DNFDPRAAAANF 235
+ + AG Y Q P LAI V+ L++ + +L+LPS + + + +
Sbjct: 254 LVVASAGMKY-QAALQHPAVLVVLAILFFVLSLSMFGLYDLKLPSRWQEKMNSVSNNQKG 312
Query: 236 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
+ V +L G+ L ASPC+T L+ L YVA + D L G L + G PLL+
Sbjct: 313 GNLVGVFLMGVISGLVASPCTTAPLSGALVYVAQTGDLLQGFLALYVLSMGMGVPLLIIG 372
Query: 296 SFAGALQSLLSFRKFSSWIN 315
+ G L + +W+N
Sbjct: 373 TSGGKL-----LPRAGAWMN 387
>gi|158520147|ref|YP_001528017.1| cytochrome c biogenesis protein transmembrane subunit
[Desulfococcus oleovorans Hxd3]
gi|158508973|gb|ABW65940.1| cytochrome c biogenesis protein transmembrane region [Desulfococcus
oleovorans Hxd3]
Length = 228
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 16/220 (7%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFG--------SGKSRAQIIGDSIAFSLG 170
S AV FGAGL++ +PC L ++P+ I + RA++I +IA+ LG
Sbjct: 7 VSYAVAFGAGLLSFFTPCVLPLIPVYFTLITGLSLENLTQAPDAEVRARVIFSTIAYVLG 66
Query: 171 LATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRA 230
+ LLG A F G Q L + + +V+G+++ +I + P + R
Sbjct: 67 FSAVFILLGASAFFLGSLINQHLGVLRVIGGVVIVVLGIHMTGVITI--PGL--QSEKRV 122
Query: 231 AAANFPSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYV 288
S+ A+L G FA +PC P+L ++L VA S++ + G LLLS Y+ G
Sbjct: 123 HVRQRSMSLAGAFLVGALFAAGWTPCIGPILGSIL-IVAGSQETALRGMLLLSAYSAGLA 181
Query: 289 APLLLAASFAGALQSLLSF-RKFSSWINPMSGALLLGGGL 327
P LL + F AL S + + +IN ++G LL+G G+
Sbjct: 182 LPFLLLSFFINALISFIRRASRVIKYINIVAGVLLIGIGI 221
>gi|383750087|ref|YP_005425190.1| cytochrome c biogenesis protein [Helicobacter pylori ELS37]
gi|380874833|gb|AFF20614.1| cytochrome c biogenesis protein [Helicobacter pylori ELS37]
Length = 239
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVIGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFAWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLILMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|385218552|ref|YP_005780027.1| cytochrome c biogenesis protein [Helicobacter pylori Gambia94/24]
gi|317013710|gb|ADU81146.1| cytochrome c biogenesis protein [Helicobacter pylori Gambia94/24]
Length = 239
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFAWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDTY-GLILMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRTIEIVSGLVLILMGI 223
>gi|420406463|ref|ZP_14905633.1| cytochrome c biogenesis protein [Helicobacter pylori CPY6311]
gi|393023300|gb|EJB24414.1| cytochrome c biogenesis protein [Helicobacter pylori CPY6311]
Length = 239
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASESNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVVGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGV 223
>gi|420447389|ref|ZP_14946281.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-43]
gi|393062804|gb|EJB63652.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-43]
Length = 239
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLILMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLVLMGI 223
>gi|420438312|ref|ZP_14937286.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-29]
gi|420468330|ref|ZP_14967072.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-10]
gi|393055912|gb|EJB56824.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-29]
gi|393088011|gb|EJB88663.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-10]
Length = 239
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDTY-GLILMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|385215542|ref|YP_005775498.1| cytochrome c biogenesis protein [Helicobacter pylori F32]
gi|317180070|dbj|BAJ57856.1| cytochrome c biogenesis protein [Helicobacter pylori F32]
Length = 239
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASESNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|293375763|ref|ZP_06622034.1| antioxidant, AhpC/TSA family [Turicibacter sanguinis PC909]
gi|292645632|gb|EFF63671.1| antioxidant, AhpC/TSA family [Turicibacter sanguinis PC909]
Length = 380
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 104/211 (49%), Gaps = 14/211 (6%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS---RAQIIGDSIAFSLGLATTLAL 177
+ ++ G+++ SPC + +LP+ LG + S + ++ + ++IAF LG++TT L
Sbjct: 6 IIIVLIEGILSFFSPCIIPLLPIYLGILSTSDSEEKLFHKSGLFKNTIAFVLGISTTFIL 65
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
LG+ + + L + ++MGL + + L++P F N + R
Sbjct: 66 LGLSFQSLSSLLAKYQNTITLVGGIIIVIMGLFYMGV--LKIP--FLNQEKRMHIQTKRM 121
Query: 238 SV-QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
++ AYL G TF+ +PC P+LA++L T L++ YT G++ P ++ A
Sbjct: 122 NILSAYLLGFTFSFGWTPCIGPMLASVLMMSITQ-----SFVLIVVYTMGFIIPFMIVAL 176
Query: 297 FAGALQSLLSFRKFS-SWINPMSGALLLGGG 326
F L L++ K + I + GA+L+ G
Sbjct: 177 FYNRLLHFLTWIKCNMDKIKLVGGAVLIISG 207
>gi|146294334|ref|YP_001184758.1| thiol:disulfide interchange protein [Shewanella putrefaciens CN-32]
gi|145566024|gb|ABP76959.1| Protein-disulfide reductase [Shewanella putrefaciens CN-32]
Length = 604
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
+L + FG G+ +L+PC + P+ G I G S A+ S+A+ G+A T +LLG
Sbjct: 194 TLVIFFGLGIGLALTPCVFPMYPILSGIIVGQGQKLSTAKAFTLSMAYVQGMAITYSLLG 253
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAI---VMGLNLLEIIELQLPSFF-DNFDPRAAAANF 235
+ + AG Y Q P LAI V+ L++ + +L+LPS + + + +
Sbjct: 254 LVVASAGMKY-QAALQHPAVLVVLAILFFVLSLSMFGLYDLKLPSRWQEKMNSVSNNQKG 312
Query: 236 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
+ V +L G+ L ASPC+T L+ L YVA + D L G L + G PLL+
Sbjct: 313 GNLVGVFLMGVISGLVASPCTTAPLSGALVYVAQTGDLLQGFLALYVLSMGMGVPLLIIG 372
Query: 296 SFAGALQSLLSFRKFSSWIN 315
+ G L + +W+N
Sbjct: 373 TSGGKL-----LPRAGAWMN 387
>gi|386755331|ref|YP_006228548.1| cytochrome c biogenesis protein [Helicobacter pylori PeCan18]
gi|420424863|ref|ZP_14923927.1| cytochrome c biogenesis protein [Helicobacter pylori Hp A-5]
gi|384561589|gb|AFI02055.1| cytochrome c biogenesis protein [Helicobacter pylori PeCan18]
gi|393043450|gb|EJB44454.1| cytochrome c biogenesis protein [Helicobacter pylori Hp A-5]
Length = 239
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLILMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|420423163|ref|ZP_14922236.1| cytochrome c biogenesis protein [Helicobacter pylori Hp A-4]
gi|420428289|ref|ZP_14927324.1| cytochrome c biogenesis protein [Helicobacter pylori Hp A-17]
gi|420502251|ref|ZP_15000792.1| cytochrome c biogenesis protein [Helicobacter pylori Hp P-41]
gi|393042443|gb|EJB43452.1| cytochrome c biogenesis protein [Helicobacter pylori Hp A-4]
gi|393045948|gb|EJB46928.1| cytochrome c biogenesis protein [Helicobacter pylori Hp A-17]
gi|393153531|gb|EJC53824.1| cytochrome c biogenesis protein [Helicobacter pylori Hp P-41]
Length = 239
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLILMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|420418210|ref|ZP_14917302.1| cytochrome c biogenesis protein [Helicobacter pylori NQ4076]
gi|393033036|gb|EJB34099.1| cytochrome c biogenesis protein [Helicobacter pylori NQ4076]
Length = 239
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDTY-GLILMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|308182439|ref|YP_003926566.1| cytochrome c biogenesis protein [Helicobacter pylori PeCan4]
gi|308184068|ref|YP_003928201.1| cytochrome c biogenesis protein [Helicobacter pylori SJM180]
gi|420454816|ref|ZP_14953646.1| cytochrome c biogenesis protein [Helicobacter pylori Hp A-14]
gi|308059988|gb|ADO01884.1| cytochrome c biogenesis protein [Helicobacter pylori SJM180]
gi|308064624|gb|ADO06516.1| cytochrome c biogenesis protein [Helicobacter pylori PeCan4]
gi|393073166|gb|EJB73940.1| cytochrome c biogenesis protein [Helicobacter pylori Hp A-14]
Length = 239
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|256845098|ref|ZP_05550556.1| cytochrome c-type biogenesis protein ccdA [Fusobacterium sp.
3_1_36A2]
gi|256718657|gb|EEU32212.1| cytochrome c-type biogenesis protein ccdA [Fusobacterium sp.
3_1_36A2]
Length = 218
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 107/213 (50%), Gaps = 19/213 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAG 186
AG+ + SPC ++P+ YI +G+ ++ + ++AF LGL+ T +LG GA G
Sbjct: 14 AGVASFFSPCIFPIIPV---YISILSNGEKKS--LSKTLAFVLGLSVTYIVLGFGAGVIG 68
Query: 187 KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQA----Y 242
+ + + + + + +++GL +EI++L+ F + N+ Q+ +
Sbjct: 69 DLF--LNSKVRIIGGIIVVILGLFQMEILKLK-------FLEKTKIMNYEGENQSIFSTF 119
Query: 243 LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQ 302
L GLTF+L +PC P+LA++L ++S D L+ Y G P ++ + + AL
Sbjct: 120 LLGLTFSLGWTPCVGPILASILILASSSGDTSNSVMLMFIYLLGMTTPFMIFSLASKALF 179
Query: 303 SLLSF-RKFSSWINPMSGALLLGGGLYTFLDRL 334
+SF +K+ I + G L++ G D+L
Sbjct: 180 KKMSFIKKYLPTIKKVGGFLIIIMGFLLIFDKL 212
>gi|384890650|ref|YP_005764783.1| cytochrome c-type biogenesis protein [Helicobacter pylori 908]
gi|385223324|ref|YP_005783250.1| Cytochrome c-type biogenesis protein [Helicobacter pylori 2017]
gi|385231173|ref|YP_005791092.1| Cytochrome c-type biogenesis protein [Helicobacter pylori 2018]
gi|307636959|gb|ADN79409.1| cytochrome c-type biogenesis protein [Helicobacter pylori 908]
gi|325995550|gb|ADZ50955.1| Cytochrome c-type biogenesis protein [Helicobacter pylori 2018]
gi|325997146|gb|ADZ49354.1| Cytochrome c-type biogenesis protein [Helicobacter pylori 2017]
Length = 239
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFAWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCVGPIFTSIV-IMSASKDAY-GLMLMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|149914989|ref|ZP_01903518.1| putative cytochrome c-type biogenesis protein CcdA [Roseobacter sp.
AzwK-3b]
gi|149811177|gb|EDM71014.1| putative cytochrome c-type biogenesis protein CcdA [Roseobacter sp.
AzwK-3b]
Length = 259
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 86/196 (43%), Gaps = 9/196 (4%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFG------SGKSRAQIIGDSIAFSLGLAT 173
++A+ AG+++ LSPC L ++P L YI +RA+ + ++ F +GL+T
Sbjct: 23 AMAIALFAGVISFLSPCVLPIVPPYLAYISGIALSDLTDERTARARAVMPALFFVMGLST 82
Query: 174 TLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAA 233
LG AS G + Q A + ++ G + + + + F D
Sbjct: 83 VFLFLGFTASAIGSLFLQYQGWFNTFAGIIVMIFGAHFVGVFRI---GFLDREARMDVGD 139
Query: 234 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
SS AY+ GL FA +PC P L +L A+ + G LL Y G P LL
Sbjct: 140 RGGSSFGAYVLGLAFAFGWTPCIGPQLGAILSLAASEANVARGTLLLAVYAVGLGVPFLL 199
Query: 294 AASFAGALQSLLSFRK 309
A+F L L+ + K
Sbjct: 200 VAAFLPRLGGLMGWMK 215
>gi|419778639|ref|ZP_14304526.1| cytochrome C biogenesis protein transmembrane region [Streptococcus
oralis SK10]
gi|383187061|gb|EIC79520.1| cytochrome C biogenesis protein transmembrane region [Streptococcus
oralis SK10]
Length = 236
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 102/222 (45%), Gaps = 37/222 (16%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQI-----------IGDSIAFSLGLA 172
+F AG+++ SPC L +LP+ Y G K+ AQ + ++AF G++
Sbjct: 10 VFLAGILSFFSPCILPLLPV---YAGVLLDDKNDAQASSGKFSISLVSLLRTLAFIAGIS 66
Query: 173 TTLALLGVGASFAGK----AYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
LLG GA F G ++ Q TG + I++GL+ +E++ LQ
Sbjct: 67 FIFILLGYGAGFLGNLLYASWFQYVTG------TVIILLGLHQMEVLHLQGLYKEKRLQL 120
Query: 229 RAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAT-SKDPLIGGTLLLSYTTGY 287
+ N QA+L GLTF+ A +PC PVL ++L A+ G L+L YT G
Sbjct: 121 KRQDQNANGYSQAFLLGLTFSFAWTPCVGPVLGSVLALAASGGSGAWQGAGLMLVYTLGL 180
Query: 288 VAPLL---LAASFAGALQSLLSFRKFSSWINPMSGALLLGGG 326
P L LA+S+ L FRK ++P G L GG
Sbjct: 181 ALPFLVLALASSYV-----LKHFRK----LHPYLGTLKKVGG 213
>gi|385220108|ref|YP_005781580.1| cytochrome c biogenesis protein [Helicobacter pylori India7]
gi|317008915|gb|ADU79495.1| cytochrome c biogenesis protein [Helicobacter pylori India7]
Length = 239
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|386752277|ref|YP_006225496.1| cytochrome c biogenesis protein [Helicobacter pylori Shi169]
gi|384558535|gb|AFH99002.1| cytochrome c biogenesis protein [Helicobacter pylori Shi169]
Length = 239
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVAGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGV 223
>gi|420506147|ref|ZP_15004662.1| cytochrome c biogenesis protein [Helicobacter pylori Hp P-74]
gi|393115652|gb|EJC16162.1| cytochrome c biogenesis protein [Helicobacter pylori Hp P-74]
Length = 239
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDA-YGLMLMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGV 223
>gi|119773678|ref|YP_926418.1| thiol:disulfide interchange protein [Shewanella amazonensis SB2B]
gi|119766178|gb|ABL98748.1| Protein-disulfide reductase [Shewanella amazonensis SB2B]
Length = 607
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 5/186 (2%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
+L + FG G+ +L+PC + P+ G I G S + S+A+ G+A T +LLG
Sbjct: 196 TLLIFFGLGIGLALTPCVFPMYPILSGIIVGQGEKLSTGRAFTLSMAYVQGMAITYSLLG 255
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAI---VMGLNLLEIIELQLP-SFFDNFDPRAAAANF 235
+ + AG Y Q P GLAI V+ L++ + +L+LP S+ + + +
Sbjct: 256 LVVASAGMKY-QAALQHPAVLIGLAILFFVLSLSMFGLYDLKLPSSWQEKMNGLSNNQKG 314
Query: 236 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
+ ++ G+ L ASPC+T L+ L YVA S D L+G L + G PLLL
Sbjct: 315 GNLTGVFIMGVISGLVASPCTTAPLSGALVYVAQSGDLLMGFAALYVLSMGMGLPLLLMG 374
Query: 296 SFAGAL 301
+ G L
Sbjct: 375 TSGGKL 380
>gi|420466586|ref|ZP_14965343.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-9]
gi|393084984|gb|EJB85672.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-9]
Length = 239
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLILMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|293365790|ref|ZP_06612496.1| cytochrome c-type biogenesis protein CcdA [Streptococcus oralis
ATCC 35037]
gi|307703342|ref|ZP_07640286.1| c-type cytochrome biogenesis protein [Streptococcus oralis ATCC
35037]
gi|291315723|gb|EFE56170.1| cytochrome c-type biogenesis protein CcdA [Streptococcus oralis
ATCC 35037]
gi|307623118|gb|EFO02111.1| c-type cytochrome biogenesis protein [Streptococcus oralis ATCC
35037]
Length = 236
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 33/214 (15%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQI-----------IGDSIAFSLGLA 172
+F AG+++ SPC L +LP+ Y G K+ AQ + ++AF G++
Sbjct: 10 VFLAGILSFFSPCILPLLPV---YAGVLLDDKNDAQASSGKFSISLVSLLRTLAFIAGIS 66
Query: 173 TTLALLGVGASFAGK----AYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
LLG GA F G ++ Q TG + I++GL+ +E++ LQ
Sbjct: 67 FIFILLGYGAGFLGNLLYASWFQYVTG------AIIILLGLHQMEVLHLQGLYKERRLQL 120
Query: 229 RAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAT-SKDPLIGGTLLLSYTTGY 287
+ QA+L GLTF+ A +PC PVL ++L A+ L G L+L YT G
Sbjct: 121 KRQGQKGNGYSQAFLLGLTFSFAWTPCVGPVLGSVLALAASGGSGALQGAGLMLVYTLGL 180
Query: 288 VAPLL---LAASFAGALQSLLSFRKFSSWINPMS 318
P L LA+S+ L FRK ++ +
Sbjct: 181 ALPFLVLALASSYV-----LKHFRKLHPYLGTLK 209
>gi|238927381|ref|ZP_04659141.1| cytochrome c biogenesis protein, transmembrane protein [Selenomonas
flueggei ATCC 43531]
gi|238884663|gb|EEQ48301.1| cytochrome c biogenesis protein, transmembrane protein [Selenomonas
flueggei ATCC 43531]
Length = 227
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 100/221 (45%), Gaps = 8/221 (3%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGS---GKSRAQIIGDSIAFSLGLA 172
+ T L+ F AG+++ LSPC L +LP T I A S G+ ++ ++ AF G
Sbjct: 1 MELTLLSGAFIAGVLSFLSPCVLPLLP-TFSLILAKNSRQDGREAQRLYVNTAAFLAGFT 59
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
LLG AS G L A+ L I+MG + I ++P + P
Sbjct: 60 VIFVLLGATASLLGSWLFSYQEILRQGAAALIILMGFFMTGWI--RIPLLLREYRP-FQR 116
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAP-L 291
F A+L G F L +PC+ PVLAT+L Y ++ G LLL Y+ G+ P
Sbjct: 117 RGFDGVGGAFLLGCGFTLGWTPCTGPVLATILLYAGSAATVGAGALLLLVYSMGFAVPFF 176
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLD 332
LLA + + L F ++ I +G L+ G+ + D
Sbjct: 177 LLAVIWRRHIMKLRGFYQYLPRIQQTAGIALIVLGILLWAD 217
>gi|251799993|ref|YP_003014724.1| cytochrome C biogenesis protein transmembrane region [Paenibacillus
sp. JDR-2]
gi|247547619|gb|ACT04638.1| cytochrome c biogenesis protein transmembrane region [Paenibacillus
sp. JDR-2]
Length = 231
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 15/219 (6%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGA-----FGSGKSRAQIIGDSIAFSLGLATTLALLG 179
F AGL++ LSPC L ++P+ L YI + ++ +I ++ F LG + LLG
Sbjct: 7 FSAGLLSFLSPCVLPLIPVYLSYIAGTSATDLKNSPNKLTVISQTVLFILGFSILFVLLG 66
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
+ S + + + L +V GL++ ++ ++L + P +
Sbjct: 67 ISVSTVSRLLSEHMRLVQQIGGALIVVFGLHMTGLLRIKLLYSEKRYLPSGSPGK---KA 123
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPLLLAASFA 298
A + G+ FA+ +PC P+L+++L Y A S L G LLLS Y G P LL+A
Sbjct: 124 GALVLGMAFAVGWTPCIGPILSSILIY-AGSMATLGKGVLLLSMYALGLAVPFLLSAVLI 182
Query: 299 GALQSLLSFRKFSSW---INPMSGALLLGGGLYTFLDRL 334
L + L RK + I+ SG +++ G+ F ++L
Sbjct: 183 DNLTAYL--RKVTKHLPKISVASGVVMMLMGVLVFTNQL 219
>gi|386745776|ref|YP_006218993.1| cytochrome c biogenesis protein [Helicobacter pylori HUP-B14]
gi|384552025|gb|AFI06973.1| cytochrome c biogenesis protein [Helicobacter pylori HUP-B14]
Length = 239
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLILMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLRSLKKYNRAIEIVSGLVLVLMGI 223
>gi|420464964|ref|ZP_14963731.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-6]
gi|393082451|gb|EJB83167.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-6]
Length = 239
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGVLTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRTIEIVSGLVLILMGI 223
>gi|258646809|ref|ZP_05734278.1| cytochrome c biogenesis membrane protein [Dialister invisus DSM
15470]
gi|260404240|gb|EEW97787.1| cytochrome c biogenesis membrane protein [Dialister invisus DSM
15470]
Length = 237
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 82/186 (44%), Gaps = 23/186 (12%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIG--------AFGSGKSRAQIIGDSIAFSLGLATTL 175
+F AG+++ SPC +LP+ LG + +F K + ++ F GL+T
Sbjct: 13 VFLAGVLSFFSPCVFPLLPVYLGKLAEDPGTRSFSFFGLKVYVSPLVKTVFFITGLSTVF 72
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LG G F + T P G+ I++GL+ +E+I + NF R
Sbjct: 73 FSLGFGTGFFSHIFYYPYT--PYVMGGIVILLGLHQMELINI-------NFLQRQKKIEL 123
Query: 236 PSSVQ-----AYLAGLTFALAASPCSTPVLATLLGYVATSK-DPLIGGTLLLSYTTGYVA 289
Q A+L GLTF+ +PC PVL +L VA+ L GG L+ Y G
Sbjct: 124 DGKRQGGILGAFLLGLTFSFGWTPCVGPVLGAVLAVVASENGSALYGGLLMAVYAAGMAV 183
Query: 290 PLLLAA 295
P L+ A
Sbjct: 184 PFLILA 189
>gi|450028435|ref|ZP_21832141.1| putative cytochrome C biogenesis protein [Streptococcus mutans
G123]
gi|450055555|ref|ZP_21841837.1| putative cytochrome C biogenesis protein [Streptococcus mutans
NLML4]
gi|450092194|ref|ZP_21855819.1| putative cytochrome C biogenesis protein [Streptococcus mutans W6]
gi|450131799|ref|ZP_21869738.1| putative cytochrome C biogenesis protein [Streptococcus mutans
NLML8]
gi|450147446|ref|ZP_21875031.1| putative cytochrome C biogenesis protein [Streptococcus mutans 14D]
gi|450166114|ref|ZP_21882180.1| putative cytochrome C biogenesis protein [Streptococcus mutans B]
gi|449153572|gb|EMB57229.1| putative cytochrome C biogenesis protein [Streptococcus mutans
NLML8]
gi|449195520|gb|EMB96834.1| putative cytochrome C biogenesis protein [Streptococcus mutans
G123]
gi|449207363|gb|EMC08040.1| putative cytochrome C biogenesis protein [Streptococcus mutans
NLML4]
gi|449218541|gb|EMC18546.1| putative cytochrome C biogenesis protein [Streptococcus mutans W6]
gi|449236849|gb|EMC35748.1| putative cytochrome C biogenesis protein [Streptococcus mutans 14D]
gi|449239933|gb|EMC38632.1| putative cytochrome C biogenesis protein [Streptococcus mutans B]
Length = 258
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-------SIAFS 168
L ++ +F GL++ SPC L +LP+ +G + G K +II D + F
Sbjct: 24 LQHITILTLFIEGLLSFFSPCVLPILPVYIGILAGQGEEKQSGEIIWDRRKVFTNTFLFI 83
Query: 169 LGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
G+A T +L +S + L L ++MGL + +I+ S F N +
Sbjct: 84 SGIAATFFILAFASSLISQFLQSHIQFLQNLGGILILIMGLVQVGLIK----SHFFNREY 139
Query: 229 RAAAANFPSSVQ-----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSY 283
A + + + A+L G TF+ + +PC P+LA++ Y +T + + L+L Y
Sbjct: 140 SAKNKVYQAGQKVTPLIAFLMGFTFSFSWTPCIGPILASVFLYASTHQG-IYSVLLILIY 198
Query: 284 TTGYVAPLLLAASFAGALQSLLSFRK 309
G+V P L A F+ + S+ +K
Sbjct: 199 CLGFVIPFALIALFSQRVMSVFKKQK 224
>gi|89896887|ref|YP_520374.1| cytochrome c biogenesis protein [Desulfitobacterium hafniense Y51]
gi|89336335|dbj|BAE85930.1| putative cytochrome c biogenesis protein [Desulfitobacterium
hafniense Y51]
Length = 233
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 115/237 (48%), Gaps = 16/237 (6%)
Query: 100 SAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ 159
S Q E++ +S S+ + + AG++TS++PC L+ +PL +GY+G G + R +
Sbjct: 3 SITNQWLESISAGISMTSWLAPILALVAGVLTSITPCALTSVPLVIGYVGGTGQREPR-K 61
Query: 160 IIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQL 219
S F++G+A T +LG AS G+ G+ + L ++M L + E+
Sbjct: 62 AFWLSATFAIGMAVTFTVLGTIASLLGRLMQGTGSWWYIFLGVLMLLMALQIWEV----- 116
Query: 220 PSFFDNFDPRAAAANFPSSVQ---AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIG 276
NF P + A + + A+LAG+ +SPC+TPVL LL VA + G
Sbjct: 117 ----YNFIPSSYALSKNTKRGFGGAFLAGVLGGFFSSPCATPVLVVLLAVVAKEGSLVWG 172
Query: 277 GTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKF---SSWINPMSGALLLGGGLYTF 330
LL+ Y+ G+ +LLA + G L S K+ S + G +++ G Y F
Sbjct: 173 IFLLILYSLGHSFLVLLAGTSVGFAHKLTSNSKYGPLSKLLKIFMGLIVMCIGFYMF 229
>gi|420431847|ref|ZP_14930866.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-16]
gi|420451604|ref|ZP_14950456.1| cytochrome c biogenesis protein [Helicobacter pylori Hp A-6]
gi|420456533|ref|ZP_14955354.1| cytochrome c biogenesis protein [Helicobacter pylori Hp A-16]
gi|393049440|gb|EJB50406.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-16]
gi|393070462|gb|EJB71252.1| cytochrome c biogenesis protein [Helicobacter pylori Hp A-6]
gi|393075164|gb|EJB75919.1| cytochrome c biogenesis protein [Helicobacter pylori Hp A-16]
Length = 239
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFAWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDTY-GLILMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|420414775|ref|ZP_14913892.1| cytochrome c biogenesis protein [Helicobacter pylori NQ4053]
gi|393034519|gb|EJB35576.1| cytochrome c biogenesis protein [Helicobacter pylori NQ4053]
Length = 239
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFAWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDTY-GLILMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|420411765|ref|ZP_14910896.1| cytochrome c biogenesis protein [Helicobacter pylori NQ4228]
gi|393028892|gb|EJB29975.1| cytochrome c biogenesis protein [Helicobacter pylori NQ4228]
Length = 239
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFAWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIISGLVLILMGI 223
>gi|384897002|ref|YP_005772430.1| cytochrome c biogenesis protein [Helicobacter pylori Lithuania75]
gi|317012107|gb|ADU82715.1| cytochrome c biogenesis protein [Helicobacter pylori Lithuania75]
Length = 239
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFAWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLILMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|170728483|ref|YP_001762509.1| thiol:disulfide interchange protein [Shewanella woodyi ATCC 51908]
gi|169813830|gb|ACA88414.1| Protein-disulfide reductase [Shewanella woodyi ATCC 51908]
Length = 609
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 91/189 (48%), Gaps = 11/189 (5%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
+L + FG G+ +L+PC + P+ G I G S A+ S+ + G+A T +LLG
Sbjct: 201 TLVIFFGLGIGLALTPCVFPMYPILSGIIVGQGKKLSTAKAFSLSMVYVQGMAITYSLLG 260
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAI---VMGLNLLEIIELQLPSFF----DNFDPRAAA 232
+ + AG Y Q P LAI V+ L++ + EL+LPS + ++F
Sbjct: 261 LVVASAGMKY-QAALQHPAVLIVLAILFFVLSLSMFGLYELKLPSSWQEKMNSFSNNQKG 319
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
N + +L G+ L ASPC+T L+ L YVA + D L G L + G PLL
Sbjct: 320 GNV---IGVFLMGIISGLVASPCTTAPLSGALVYVAQTGDLLQGFLALYVLSMGMGLPLL 376
Query: 293 LAASFAGAL 301
+ + G L
Sbjct: 377 IIGTSGGKL 385
>gi|449984915|ref|ZP_21819386.1| putative cytochrome C biogenesis protein [Streptococcus mutans
NFSM2]
gi|449179849|gb|EMB82040.1| putative cytochrome C biogenesis protein [Streptococcus mutans
NFSM2]
Length = 258
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-------SIAFS 168
L ++ +F GL++ SPC L +LP+ +G + G K +II D + F
Sbjct: 24 LQHITILTLFIEGLLSFFSPCVLPILPVYIGILAGQGEEKQSGEIIWDRRKVFTNTFLFI 83
Query: 169 LGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
G+A T +L +S + L L ++MGL + +I+ S F N +
Sbjct: 84 SGIAATFFILAFASSLISQFLQSHIQFLQNLGGILILIMGLVQVGLIK----SHFFNREY 139
Query: 229 RAAAANFPSSVQ-----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSY 283
A + + + A+L G TF+ + +PC P+LA++ Y +T + + L+L Y
Sbjct: 140 SAKNKVYQAGQKVTPLIAFLMGFTFSFSWTPCIGPILASVFLYASTHQG-IYSVLLILIY 198
Query: 284 TTGYVAPLLLAASFAGALQSLLSFRK 309
G+V P L A F+ + S+ +K
Sbjct: 199 CLGFVIPFALIALFSQRVMSVFKKQK 224
>gi|307946544|ref|ZP_07661879.1| cytochrome c-type biogenesis protein CcdA [Roseibium sp. TrichSKD4]
gi|307770208|gb|EFO29434.1| cytochrome c-type biogenesis protein CcdA [Roseibium sp. TrichSKD4]
Length = 244
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYI---------GAFGSGKSRAQIIGDSIAFSL 169
S+ F AGL++ +SPC L ++P L Y+ G + ++ +++ SIAF
Sbjct: 4 VSIWAAFLAGLLSFVSPCVLPIVPPYLCYLAGVSVEELKGEAATAETSRRVLYSSIAFVF 63
Query: 170 GLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR 229
G A LG AS GK+ Q L + A + I+MGL+ L + + L + R
Sbjct: 64 GFAVVFVALGATASVVGKSIAQHFDTLSIIAGIIIIIMGLHFLGVFRIGL----LYREAR 119
Query: 230 AAAANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYV 288
+ P+ V A++ GL FA +PC PVLA +L +S+ G LL Y G
Sbjct: 120 VQVDSKPAGLVGAFVMGLAFAFGWTPCVGPVLAAVLFVAGSSETIWNGAGLLFVYAMGLG 179
Query: 289 APLLLAASFAGA-LQSLLSFRKFSSWINPMSGALLL 323
P +LA +FAG L+ +FRK + + G L+
Sbjct: 180 IPFILAGAFAGRFLKWAGNFRKHMGTVEKIMGGFLV 215
>gi|188527071|ref|YP_001909758.1| cytochrome c biogenesis protein [Helicobacter pylori Shi470]
gi|188143311|gb|ACD47728.1| cytochrome c biogenesis protein [Helicobacter pylori Shi470]
Length = 239
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVAGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGV 223
>gi|420439953|ref|ZP_14938913.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-30]
gi|420461559|ref|ZP_14960349.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-3]
gi|393057979|gb|EJB58875.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-30]
gi|393081539|gb|EJB82259.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-3]
Length = 239
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFAWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLILMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|420448295|ref|ZP_14947175.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-44]
gi|393065649|gb|EJB66477.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-44]
Length = 239
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFAWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLILMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|392410436|ref|YP_006447043.1| thiol:disulfide interchange protein [Desulfomonile tiedjei DSM
6799]
gi|390623572|gb|AFM24779.1| thiol:disulfide interchange protein [Desulfomonile tiedjei DSM
6799]
Length = 448
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 10/217 (4%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGAS 183
+F GL +L+PC ++P+T+ Y G S + R ++ + + GL+ T ++LGV A+
Sbjct: 57 VFAGGLALNLTPCVYPLIPITVSYFGG-RSSQGRGKLAVHGLLYLGGLSLTNSVLGVVAA 115
Query: 184 FAGKAYGQIGTGLPLAASGLAIVMGL---NLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
G G P+ +A V+ +L ELQLP + R+ A F
Sbjct: 116 LTGSLMGSALQN-PIVLLVVAGVLVFFATSLFGFWELQLPQGLTSAASRSYAGYF----G 170
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGA 300
GLT + A+PC P + LL +VA+ P +G + + + G PL + A F+G+
Sbjct: 171 TLFMGLTLGVVAAPCLGPFVLGLLTWVASMGSPWLGFLIFFTLSLGLGVPLFVLAMFSGS 230
Query: 301 LQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFPT 337
L+ L ++ W+ + G +L+G Y F+ L P+
Sbjct: 231 LEKLPGSGEWMLWVRKLMGWVLVGMAAY-FVKPLLPS 266
>gi|420463261|ref|ZP_14962039.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-4]
gi|393080789|gb|EJB81514.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-4]
Length = 239
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFAWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|39996424|ref|NP_952375.1| cytochrome c biogenesis protein CcdA [Geobacter sulfurreducens PCA]
gi|409911857|ref|YP_006890322.1| cytochrome c biogenesis protein CcdA [Geobacter sulfurreducens
KN400]
gi|39983304|gb|AAR34698.1| cytochrome c biogenesis protein CcdA [Geobacter sulfurreducens PCA]
gi|298505434|gb|ADI84157.1| cytochrome c biogenesis protein CcdA [Geobacter sulfurreducens
KN400]
Length = 242
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 19/223 (8%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFG---------SGKSRAQIIGDSIAFSLGLATTL 175
F AGL++ LSPC L ++P + YI + K R Q I S+ F G
Sbjct: 12 FVAGLLSFLSPCVLPLIPSFITYITGLSFADIQSEHPTHKVRQQTIVHSLLFIAGFTFVF 71
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LLG A+F G + + L ++ G+++ ++ + L A +
Sbjct: 72 VLLGASATFIGGFLHEHMNVIRKVGGALIVIFGIHVSGLVPIHLLLGEKRLQVHRKPAGY 131
Query: 236 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
S +L GL FA +PC P+LA++L AT + G LL +Y+ G P L++
Sbjct: 132 LGS---FLVGLAFAAGWTPCIGPILASILMVAATEETVTKGILLLFTYSMGLAIPFFLSS 188
Query: 296 SFAGALQSLLS----FRKFSSWINPMSGALLLGGGLYTFLDRL 334
A+ L+ F+K + ++G L+ G+ F + L
Sbjct: 189 L---AMHQFLTFFNRFKKHIRILEIVTGLFLVVVGVMIFTNYL 228
>gi|415887478|ref|ZP_11548982.1| cytochrome c-type biogenesis protein CcdA [Bacillus methanolicus
MGA3]
gi|387585249|gb|EIJ77585.1| cytochrome c-type biogenesis protein CcdA [Bacillus methanolicus
MGA3]
Length = 235
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 17/218 (7%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIG-------DSIAFSLGLATTLAL 177
FGAGL++ +SPC L + P L YI + + + + ++ F LG +
Sbjct: 10 FGAGLLSFISPCCLPLYPAFLSYITGVSVDEVKKENVMIQKRAMLHTLFFLLGFSVIFIA 69
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
+G G S GK + + ++ I GL +L + PSF D R N PS
Sbjct: 70 IGFGTSVIGKIFVGYQDLIRQISALFIIFFGLVILGVFS---PSFMMK-DKRFVFRNKPS 125
Query: 238 S-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
+ L G+ FA +PC+ P+L +++ AT P + Y G+ P + +
Sbjct: 126 GYFGSILIGIGFAAGWTPCTGPILVSVIALAAT--KPSAALLYMFVYVLGFAVPFFIMSF 183
Query: 297 FAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
F G L + ++++S I + G L++ G+ F D +
Sbjct: 184 FIGKLNWI---KRYNSVIVKVGGFLMIVMGILLFFDWM 218
>gi|384893873|ref|YP_005767922.1| cytochrome c biogenesis protein [Helicobacter pylori Sat464]
gi|308063127|gb|ADO05014.1| cytochrome c biogenesis protein [Helicobacter pylori Sat464]
Length = 239
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVAGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRTIEIVSGLVLILMGV 223
>gi|99081298|ref|YP_613452.1| cytochrome c biogenesis protein, transmembrane region [Ruegeria sp.
TM1040]
gi|99037578|gb|ABF64190.1| cytochrome c biogenesis protein transmembrane region [Ruegeria sp.
TM1040]
Length = 250
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 128 GLVTSLSPCTLSVLPLTLGY-----IGAF-GSGKSRAQIIGDSIAFSLGLATTLALLGVG 181
G+++ LSPC L ++P L Y IG G+ +R + I ++ F +GL+T LLG
Sbjct: 22 GIISFLSPCVLPIVPPYLAYMSGVTIGEIQGTAAARRKAILAAVFFVMGLSTVFLLLGFT 81
Query: 182 ASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQA 241
AS G Q A+ + I+ GL+ L + + + D S++ A
Sbjct: 82 ASAFGAFVLQNQELFAKASGVVVIIFGLHFLSVFRIPI---LDREARMETGETGGSALGA 138
Query: 242 YLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPLLLAASFAGA 300
Y+ GL FA +PC P L +L +A S+ + GTLLL Y G P LLAA F
Sbjct: 139 YVLGLAFAFGWTPCIGPQLGAILS-LAASEASVSRGTLLLGVYALGLGVPFLLAAIFLNR 197
Query: 301 LQSLLS-FRKFSSWINPMSGALLL 323
L++ ++ S I + G LLL
Sbjct: 198 SMVLMNRIKRHMSLIEKLMGGLLL 221
>gi|384895643|ref|YP_005769632.1| cytochrome c biogenesis protein [Helicobacter pylori 35A]
gi|315586259|gb|ADU40640.1| cytochrome c biogenesis protein [Helicobacter pylori 35A]
Length = 240
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 22 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 79
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 80 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASESNSMQRF 137
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 138 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDA-YGLMLMVVFVMGLAIPFLLVALMLE 195
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 196 RALLFLKSLKKYNRAIEIVSGLVLILMGV 224
>gi|420470170|ref|ZP_14968881.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-11]
gi|393087216|gb|EJB87886.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-11]
Length = 239
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFAWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIISGLVLILMGI 223
>gi|306824905|ref|ZP_07458249.1| cytochrome c-type biogenesis protein CcdA [Streptococcus sp. oral
taxon 071 str. 73H25AP]
gi|304433116|gb|EFM36088.1| cytochrome c-type biogenesis protein CcdA [Streptococcus sp. oral
taxon 071 str. 73H25AP]
Length = 236
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 103/227 (45%), Gaps = 37/227 (16%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQI-----------IGDSIAFSLGLA 172
+F AG+++ SPC L +LP+ Y G K+ AQ + ++AF G++
Sbjct: 10 VFLAGILSFFSPCILPLLPV---YAGVLLDDKNDAQASSGKFSISLVSLVRTLAFIAGIS 66
Query: 173 TTLALLGVGASFAGK----AYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
LLG GA F G ++ Q TG + I++GL+ +E++ L+
Sbjct: 67 FIFILLGYGAGFLGNLLYASWFQYVTG------AVIILLGLHQMEVLHLKGLYKEKRLQL 120
Query: 229 RAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAT-SKDPLIGGTLLLSYTTGY 287
+ N QA+L GLTF+ A +PC PVL ++L A+ G L+L YT G
Sbjct: 121 KRQGQNANGYSQAFLLGLTFSFAWTPCVGPVLGSVLALAASGGSGAWQGAGLMLVYTLGL 180
Query: 288 VAPLL---LAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFL 331
P L LA+S+ L FRK ++P G L GG L
Sbjct: 181 ALPFLVLALASSYV-----LKHFRK----LHPYLGTLKKVGGFLIIL 218
>gi|117923561|ref|YP_864178.1| cytochrome C biogenesis protein, transmembrane region
[Magnetococcus marinus MC-1]
gi|117607317|gb|ABK42772.1| cytochrome c biogenesis protein, transmembrane region
[Magnetococcus marinus MC-1]
Length = 246
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 98/231 (42%), Gaps = 21/231 (9%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYI-----------GAFGSGKSRAQIIGDSIAF 167
+L FGAG ++ +SPC L ++P L Y+ GA G+ K S+AF
Sbjct: 4 VTLLTAFGAGFLSFISPCVLPLVPAYLSYMSGISVDEMKAAGAQGNHKVAMHAALHSLAF 63
Query: 168 SLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFD 227
LG + LG AS G+ L L ++ GL+ + + + +F F+
Sbjct: 64 VLGFSLVFVGLGATASALGQLMFDYMEYLSKIGGVLIVIFGLHFMGLFRISFLNFEARFN 123
Query: 228 PRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGY 287
P P A+ GL FA +PC P+LA +L A G LL++Y+ G
Sbjct: 124 PDRKP---PGMWGAFFIGLAFAFGWTPCVGPILAGILALSAGQDTVHEGIVLLVAYSAGL 180
Query: 288 VAPLLLAASFAGALQSLLSF----RKFSSWINPMSGALLLGGGLYTFLDRL 334
P +LA A+ L F R+ + ++G LL+ G+ F +
Sbjct: 181 GLPFILAGL---AINRFLVFFKKVRQHMHKVEIVAGGLLVIIGVLIFFGNM 228
>gi|449941386|ref|ZP_21805513.1| putative cytochrome C biogenesis protein [Streptococcus mutans
11A1]
gi|449151998|gb|EMB55715.1| putative cytochrome C biogenesis protein [Streptococcus mutans
11A1]
Length = 237
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-------SIAFS 168
L ++ +F GL++ SPC L +LP+ +G + G K +II D + F
Sbjct: 3 LQHITILTLFIEGLLSFFSPCVLPILPVYIGILADQGEEKQSGEIIWDRRKVFTNTFLFI 62
Query: 169 LGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
G+A T +L +S + L L ++MGL +++I+ S F N +
Sbjct: 63 SGIAATFFILAFASSLISQFLQSHIQFLQNLGGILILIMGLVQVDLIK----SHFFNREY 118
Query: 229 RAAAANFPSSVQ-----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSY 283
A + + + A+L G TF+ + +PC P+LA++ Y +T + + L+L Y
Sbjct: 119 SAKNKVYQAGQKVTPLIAFLMGFTFSFSWTPCIGPILASVFLYASTHQG-IYSVLLILIY 177
Query: 284 TTGYVAPLLLAASFA----GALQSLLSFRKFSS 312
G+V P L A F+ G + F K++
Sbjct: 178 CLGFVIPFALIALFSQRVMGVFKKQKRFLKYTK 210
>gi|420399750|ref|ZP_14898954.1| cytochrome c biogenesis protein [Helicobacter pylori CPY3281]
gi|393019291|gb|EJB20434.1| cytochrome c biogenesis protein [Helicobacter pylori CPY3281]
Length = 239
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASESNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDA-YGLMLMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGV 223
>gi|207091932|ref|ZP_03239719.1| cytochrome c biogenesis protein [Helicobacter pylori
HPKX_438_AG0C1]
gi|207108510|ref|ZP_03242672.1| cytochrome c biogenesis protein [Helicobacter pylori
HPKX_438_CA4C1]
Length = 239
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDA-YGLMLMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLVLMGI 223
>gi|421716330|ref|ZP_16155641.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori R037c]
gi|407220593|gb|EKE90399.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori R037c]
Length = 239
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLVLMGI 223
>gi|420409643|ref|ZP_14908789.1| cytochrome c biogenesis protein [Helicobacter pylori NQ4200]
gi|393029757|gb|EJB30837.1| cytochrome c biogenesis protein [Helicobacter pylori NQ4200]
Length = 239
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP--RAAAANFPSS 238
G S A + + + A G+ I+ GL+ L + SF A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYVAGGIVILFGLHFLGVFRF---SFLYKTQSVGLASKSNSMQR 135
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SF 297
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 136 FYPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDTY-GLILMVVFVMGLAIPFLLVALML 193
Query: 298 AGALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 194 ERALLFLKSLKKYNRTIEIISGLVLILMGV 223
>gi|365135353|ref|ZP_09343772.1| hypothetical protein HMPREF1032_01568 [Subdoligranulum sp.
4_3_54A2FAA]
gi|363612416|gb|EHL63951.1| hypothetical protein HMPREF1032_01568 [Subdoligranulum sp.
4_3_54A2FAA]
Length = 443
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS----------RAQIIGDSIAFSL 169
S A +F G+++ SPC L ++PL +GY+ G KS R +++ +++ F L
Sbjct: 10 SAAAVFLQGILSFFSPCVLPLVPLYIGYLA--GGAKSVDADGTVRYKRGRVMRNTVFFVL 67
Query: 170 GLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEII-------ELQLPSF 222
G++ T LG+G + G+ + L I+ GL L + E +LP
Sbjct: 68 GVSFTFFALGLGFTALGRFFSDNRALFARIGGVLIILFGLYQLGVFRSRALSTERRLPIR 127
Query: 223 FDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS 282
D A A +L G TF+ A +PC P L ++L +ATS G LL+
Sbjct: 128 LDRLSMNPAVA--------FLFGFTFSFAWTPCVGPALGSVL-IMATSAGSSAQGFLLIG 178
Query: 283 -YTTGYVAPLLLAASFAGALQSLLSFRK 309
YT G+V P L F G SLL F K
Sbjct: 179 VYTLGFVLPFLAVGLFTG---SLLDFFK 203
>gi|115523663|ref|YP_780574.1| cytochrome c biogenesis protein, transmembrane region
[Rhodopseudomonas palustris BisA53]
gi|115517610|gb|ABJ05594.1| cytochrome c biogenesis protein, transmembrane region
[Rhodopseudomonas palustris BisA53]
Length = 244
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 85/196 (43%), Gaps = 21/196 (10%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYI----------GAFGSGKSRAQIIGDSIAFSLGLATTLA 176
AGLV+ LSPC L ++P L Y+ G S RA +I ++ F LG +T
Sbjct: 13 AGLVSFLSPCVLPLVPPYLIYLTGATIEHVATGEKDSASKRAVMI-SALMFVLGFSTVFV 71
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
LG AS G L +AA + I+MGL+ L + ++ L R P
Sbjct: 72 ALGASASLVGGLIRAWSAELSIAAGIVIILMGLHFLGLTKIGLLM-------REGRLPIP 124
Query: 237 SSVQ---AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
V AY+ GL FA +PC P+LA +L A G LL Y+ G P LL
Sbjct: 125 KPVGLWGAYVMGLAFAFGWTPCIGPILAAILSVAAAEATVAKGAGLLAVYSAGLGIPFLL 184
Query: 294 AASFAGALQSLLSFRK 309
AA SL + K
Sbjct: 185 AALMVEQFSSLFARMK 200
>gi|298736788|ref|YP_003729318.1| cytochrome c-type biogenesis protein [Helicobacter pylori B8]
gi|298355982|emb|CBI66854.1| cytochrome c-type biogenesis protein [Helicobacter pylori B8]
Length = 240
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 22 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 79
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 80 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASKSNSMQRF 137
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 138 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVMGLAIPFLLVALMLE 195
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 196 RALLFLKSLKKYNRAIEIVSGLVLILMGV 224
>gi|302872336|ref|YP_003840972.1| cytochrome c biogenesis protein transmembrane region
[Caldicellulosiruptor obsidiansis OB47]
gi|302575195|gb|ADL42986.1| cytochrome c biogenesis protein transmembrane region
[Caldicellulosiruptor obsidiansis OB47]
Length = 215
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 102/210 (48%), Gaps = 11/210 (5%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAG 186
AG ++ SPC L ++P+ + Y+ F S+ + S+ F LG + +LGV A+ G
Sbjct: 11 AGFLSFFSPCILPLIPVYILYL--FSQKGSKLK---SSLLFVLGFSIVFVVLGVVAAAVG 65
Query: 187 KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNF-DPRAAAANFPSSVQAYLAG 245
+ L A+ + ++MGL +L++ P F F P N +V + G
Sbjct: 66 SVFSGYSFLLKKIAAMIIVLMGLVMLDLS----PDFLKKFFIPIQGKGNLDINVSPLILG 121
Query: 246 LTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLL 305
+ +++ +PC PVL ++L A S+ L G LL Y+ G+ P L+++ L++
Sbjct: 122 MVLSISWTPCIGPVLTSILSMAALSETFLKGAMLLFIYSMGFAVPFLISSFLIDRLKAFF 181
Query: 306 -SFRKFSSWINPMSGALLLGGGLYTFLDRL 334
++S + +G LL+ G+ F D++
Sbjct: 182 GMLNRYSRAVEYFTGTLLIAFGMLAFFDKI 211
>gi|450045117|ref|ZP_21838265.1| putative cytochrome C biogenesis protein [Streptococcus mutans N34]
gi|449200874|gb|EMC01892.1| putative cytochrome C biogenesis protein [Streptococcus mutans N34]
Length = 237
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-------SIAFS 168
L ++ +F GL++ SPC L +LP+ +G + G K +II D + F
Sbjct: 3 LQHITILTLFIEGLLSFFSPCVLPILPVYIGILAGQGEEKQSGEIIWDRRKVFTNTFLFI 62
Query: 169 LGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
G+A T +L +S + L L ++MGL + +I+ S F N +
Sbjct: 63 SGIAATFFILAFASSLISQFLKSHIQFLQNLGGILILIMGLVQVGLIK----SHFFNREY 118
Query: 229 RAAAANFPSSVQ-----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSY 283
A + + + A+L G TF+ + +PC P+LA++ Y +T + + L+L Y
Sbjct: 119 SAKNKVYQAGQKVTPLIAFLMGFTFSFSWTPCIGPILASVFLYASTHQG-IYSVLLILIY 177
Query: 284 TTGYVAPLLLAASFAGALQSLLSFRK 309
G+V P L A F+ + S+ +K
Sbjct: 178 CLGFVIPFALIALFSQRVMSVFKKQK 203
>gi|294142478|ref|YP_003558456.1| thiol:disulfide interchange protein DsbD [Shewanella violacea
DSS12]
gi|293328947|dbj|BAJ03678.1| thiol:disulfide interchange protein DsbD [Shewanella violacea
DSS12]
Length = 616
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 11/189 (5%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
+L + FG G+ +L+PC + P+ G I G S A+ S+ + G+A T +LLG
Sbjct: 207 TLVIFFGLGIGLALTPCVFPMYPILSGIIVGQGKKLSTAKAFSLSMVYVQGMAITYSLLG 266
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAI---VMGLNLLEIIELQLPSFF----DNFDPRAAA 232
+ + AG Y Q P LA+ V+ L++ + EL+LPS + ++F
Sbjct: 267 LVVASAGMKY-QAALQHPAVLIALAVLFFVLSLSMFGLYELKLPSKWQEKMNSFSNNQKG 325
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
N + ++ G+ L ASPC+T L+ L YVA + D L G L + G PLL
Sbjct: 326 GNV---IGVFMMGVISGLVASPCTTAPLSGALMYVAQTGDLLQGFLALYVLSMGMGLPLL 382
Query: 293 LAASFAGAL 301
+ + G L
Sbjct: 383 IIGTSGGKL 391
>gi|397649818|ref|YP_006490345.1| cytochrome C biogenesis protein [Streptococcus mutans GS-5]
gi|449950154|ref|ZP_21808131.1| putative cytochrome C biogenesis protein [Streptococcus mutans
11SSST2]
gi|450000170|ref|ZP_21824959.1| putative cytochrome C biogenesis protein [Streptococcus mutans N29]
gi|450180091|ref|ZP_21887018.1| putative cytochrome C biogenesis protein [Streptococcus mutans 24]
gi|392603387|gb|AFM81551.1| putative cytochrome C biogenesis protein [Streptococcus mutans
GS-5]
gi|449167354|gb|EMB70241.1| putative cytochrome C biogenesis protein [Streptococcus mutans
11SSST2]
gi|449186062|gb|EMB87909.1| putative cytochrome C biogenesis protein [Streptococcus mutans N29]
gi|449248573|gb|EMC46810.1| putative cytochrome C biogenesis protein [Streptococcus mutans 24]
Length = 237
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-------SIAFS 168
L ++ +F GL++ SPC L +LP+ +G + G K +II D + F
Sbjct: 3 LQHITILTLFIEGLLSFFSPCVLPILPVYIGILAGQGEEKQSGEIIWDRRKVFTNTFLFI 62
Query: 169 LGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
G+A T +L +S + L L ++MGL + +I+ S F N +
Sbjct: 63 SGIAATFFILAFASSLISQFLQSHIQFLQNLGGILILIMGLVQVGLIK----SHFFNREY 118
Query: 229 RAAAANFPSSVQ-----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSY 283
A + + + A+L G TF+ + +PC P+LA++ Y +T + + L+L Y
Sbjct: 119 SAKNKVYQAGQKVTPLIAFLMGFTFSFSWTPCIGPILASVFLYASTHQG-IYSVLLILIY 177
Query: 284 TTGYVAPLLLAASFAGALQSLLSFRK 309
G+V P L A F+ + S+ +K
Sbjct: 178 CLGFVIPFALIALFSQRVMSVFKKQK 203
>gi|220916915|ref|YP_002492219.1| cytochrome c biogenesis protein transmembrane protein
[Anaeromyxobacter dehalogenans 2CP-1]
gi|219954769|gb|ACL65153.1| cytochrome c biogenesis protein transmembrane region
[Anaeromyxobacter dehalogenans 2CP-1]
Length = 398
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 115/221 (52%), Gaps = 12/221 (5%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIG-----AFGSGKSRAQIIGDSIAFSLGLATTLALL 178
+F AG++T SPC L ++P+ L +G A G+ ++ +IAFSLGLA L
Sbjct: 8 LFAAGILTFASPCVLPLVPVYLSLLGGASVEALRRGERPRGLVPSAIAFSLGLAAVFVAL 67
Query: 179 GVGASFAGKAYGQIGTGLPLAASG-LAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
G GAS AG+A L LA SG L + +GL +L + L+LP+ P A
Sbjct: 68 GAGASAAGEALSAHRDAL-LAVSGALVVALGLKVLGV--LRLPALDVERRPWLARVRPGG 124
Query: 238 SVQAYLA-GLTFALAASPCSTPVLATLLGYVATS-KDPLIGGTLLLSYTTGYVAPLLLAA 295
S+ A A G FAL +PC PVL ++L + A++ P G L +Y G V PL+LAA
Sbjct: 125 SLAASFAFGGAFALGWTPCVGPVLGSVLTWTASAGASPARGALYLGTYAAGLVTPLVLAA 184
Query: 296 SFAGALQSLLS-FRKFSSWINPMSGALLLGGGLYTFLDRLF 335
+FAG + L ++ + +G LL+G G+ DRL
Sbjct: 185 AFAGRALAWLDRLKRQLPRLEKATGLLLVGAGILLATDRLM 225
>gi|94967211|ref|YP_589259.1| cytochrome c biogenesis transmembrane protein [Candidatus
Koribacter versatilis Ellin345]
gi|94549261|gb|ABF39185.1| cytochrome c biogenesis protein, transmembrane [Candidatus
Koribacter versatilis Ellin345]
Length = 240
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 21/199 (10%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAF----------GSGKSRAQIIGDSIAFSLGLAT 173
+F AGL++ LSPC VLPL GY+ G K ++ +SI F +G +
Sbjct: 10 VFLAGLLSFLSPC---VLPLVPGYVSLISGASVEDLQSGDRKLSRTVLLNSIMFIVGFSV 66
Query: 174 TLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQ-LPSFFDNFDPRAAA 232
LG A+ G+ L A + I+ GL+L+ + +++ L + D + +
Sbjct: 67 VFIALGAVATGIGQFMNIYRRQLMQVAGVVIIIFGLHLIGVFKIKALLADKRLHDMKGSG 126
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPL 291
+++ A+L G FA +PC P+LA +L +A S+D ++ G LLL+ Y++G P
Sbjct: 127 ----TAIGAFLIGFAFAFGWTPCIGPILAGVLA-IAGSQDTVVKGVLLLAVYSSGLAVPF 181
Query: 292 LLAASFAGALQSLLS-FRK 309
LL + F G + + FR+
Sbjct: 182 LLTSLFVGGFLAFYTKFRR 200
>gi|306829815|ref|ZP_07463002.1| cytochrome c-type biogenesis protein CcdA [Streptococcus mitis ATCC
6249]
gi|304427826|gb|EFM30919.1| cytochrome c-type biogenesis protein CcdA [Streptococcus mitis ATCC
6249]
Length = 236
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 102/219 (46%), Gaps = 31/219 (14%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYI------GAFGSGKSRAQIIG--DSIAFSLGLATTL 175
+F AG+++ SPC L +LP+ G + SGK ++ ++AF G++
Sbjct: 10 VFLAGILSFFSPCILPLLPVYAGVLLDDKDGAQASSGKFSISVVSLLRTMAFIAGISFVF 69
Query: 176 ALLGVGASFAGK----AYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAA 231
LLG GA F G ++ Q TG + I++GL+ +E++ LQ +
Sbjct: 70 ILLGYGAGFLGNLLYASWFQYVTG------AVIILLGLHQMEVLHLQGLYKERRLQLKRQ 123
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAT-SKDPLIGGTLLLSYTTGYVAP 290
N QA+L GLTF+ A +PC PVL ++L A+ G L+L YT G P
Sbjct: 124 DQNANGYSQAFLLGLTFSFAWTPCVGPVLGSVLALAASGGSGAWQGAGLMLVYTLGLALP 183
Query: 291 LL---LAASFAGALQSLLSFRKFSSWINPMSGALLLGGG 326
L LA+S+ L FRK ++P G L GG
Sbjct: 184 FLVLALASSYV-----LKHFRK----LHPYLGILKKVGG 213
>gi|24379600|ref|NP_721555.1| cytochrome C biogenesis protein [Streptococcus mutans UA159]
gi|387786054|ref|YP_006251150.1| putative cytochrome C biogenesis protein [Streptococcus mutans
LJ23]
gi|449864421|ref|ZP_21778321.1| putative cytochrome C biogenesis protein [Streptococcus mutans U2B]
gi|449870573|ref|ZP_21780745.1| putative cytochrome C biogenesis protein [Streptococcus mutans
8ID3]
gi|449876061|ref|ZP_21782564.1| putative cytochrome C biogenesis protein [Streptococcus mutans S1B]
gi|449897939|ref|ZP_21790298.1| putative cytochrome C biogenesis protein [Streptococcus mutans
R221]
gi|449908881|ref|ZP_21794021.1| putative cytochrome C biogenesis protein [Streptococcus mutans
OMZ175]
gi|449915011|ref|ZP_21795988.1| putative cytochrome C biogenesis protein [Streptococcus mutans
15JP3]
gi|449969848|ref|ZP_21813466.1| putative cytochrome C biogenesis protein [Streptococcus mutans
2VS1]
gi|449974812|ref|ZP_21815480.1| putative cytochrome C biogenesis protein [Streptococcus mutans
11VS1]
gi|449979463|ref|ZP_21816699.1| putative cytochrome C biogenesis protein [Streptococcus mutans
5SM3]
gi|449990290|ref|ZP_21821432.1| putative cytochrome C biogenesis protein [Streptococcus mutans
NVAB]
gi|449995566|ref|ZP_21823047.1| putative cytochrome C biogenesis protein [Streptococcus mutans A9]
gi|450039896|ref|ZP_21836468.1| putative cytochrome C biogenesis protein [Streptococcus mutans T4]
gi|450070808|ref|ZP_21847789.1| putative cytochrome C biogenesis protein [Streptococcus mutans M2A]
gi|450082032|ref|ZP_21852135.1| putative cytochrome C biogenesis protein [Streptococcus mutans N66]
gi|450087088|ref|ZP_21854074.1| putative cytochrome C biogenesis protein [Streptococcus mutans
NV1996]
gi|450120394|ref|ZP_21865708.1| putative cytochrome C biogenesis protein [Streptococcus mutans ST6]
gi|450124776|ref|ZP_21867195.1| putative cytochrome C biogenesis protein [Streptococcus mutans U2A]
gi|450159501|ref|ZP_21879471.1| putative cytochrome C biogenesis protein [Streptococcus mutans
66-2A]
gi|24377548|gb|AAN58861.1|AE014953_8 putative cytochrome C biogenesis protein [Streptococcus mutans
UA159]
gi|379132455|dbj|BAL69207.1| putative cytochrome C biogenesis protein [Streptococcus mutans
LJ23]
gi|449156481|gb|EMB59950.1| putative cytochrome C biogenesis protein [Streptococcus mutans
8ID3]
gi|449157148|gb|EMB60597.1| putative cytochrome C biogenesis protein [Streptococcus mutans
15JP3]
gi|449173852|gb|EMB76388.1| putative cytochrome C biogenesis protein [Streptococcus mutans
2VS1]
gi|449177866|gb|EMB80151.1| putative cytochrome C biogenesis protein [Streptococcus mutans
11VS1]
gi|449177995|gb|EMB80277.1| putative cytochrome C biogenesis protein [Streptococcus mutans
5SM3]
gi|449181858|gb|EMB83917.1| putative cytochrome C biogenesis protein [Streptococcus mutans
NVAB]
gi|449184342|gb|EMB86292.1| putative cytochrome C biogenesis protein [Streptococcus mutans A9]
gi|449199789|gb|EMC00842.1| putative cytochrome C biogenesis protein [Streptococcus mutans T4]
gi|449213349|gb|EMC13687.1| putative cytochrome C biogenesis protein [Streptococcus mutans M2A]
gi|449214796|gb|EMC15035.1| putative cytochrome C biogenesis protein [Streptococcus mutans N66]
gi|449218487|gb|EMC18493.1| putative cytochrome C biogenesis protein [Streptococcus mutans
NV1996]
gi|449230303|gb|EMC29569.1| putative cytochrome C biogenesis protein [Streptococcus mutans ST6]
gi|449233321|gb|EMC32397.1| putative cytochrome C biogenesis protein [Streptococcus mutans U2A]
gi|449241159|gb|EMC39803.1| putative cytochrome C biogenesis protein [Streptococcus mutans
66-2A]
gi|449253137|gb|EMC51100.1| putative cytochrome C biogenesis protein [Streptococcus mutans S1B]
gi|449260505|gb|EMC58004.1| putative cytochrome C biogenesis protein [Streptococcus mutans
R221]
gi|449262282|gb|EMC59736.1| putative cytochrome C biogenesis protein [Streptococcus mutans
OMZ175]
gi|449264845|gb|EMC62178.1| putative cytochrome C biogenesis protein [Streptococcus mutans U2B]
Length = 237
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-------SIAFS 168
L ++ +F GL++ SPC L +LP+ +G + G K +II D + F
Sbjct: 3 LQHITILTLFIEGLLSFFSPCVLPILPVYIGILAGQGEEKQSGEIIWDRRKVFTNTFLFI 62
Query: 169 LGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
G+A T +L +S + L L ++MGL + +I+ S F N +
Sbjct: 63 SGIAATFFILAFASSLISQFLQSHIQFLQNLGGILILIMGLVQVGLIK----SHFFNREY 118
Query: 229 RAAAANFPSSVQ-----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSY 283
A + + + A+L G TF+ + +PC P+LA++ Y +T + + L+L Y
Sbjct: 119 SAKNKVYQAGQKVTPLIAFLMGFTFSFSWTPCIGPILASVFLYASTHQG-IYSVLLILIY 177
Query: 284 TTGYVAPLLLAASFAGALQSLLSFRK 309
G+V P L A F+ + S+ +K
Sbjct: 178 CLGFVIPFALIALFSQRVMSVFKKQK 203
>gi|333896956|ref|YP_004470830.1| cytochrome c biogenesis protein transmembrane region
[Thermoanaerobacterium xylanolyticum LX-11]
gi|333112221|gb|AEF17158.1| cytochrome c biogenesis protein transmembrane region
[Thermoanaerobacterium xylanolyticum LX-11]
Length = 220
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 19/219 (8%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
SL F G+V+ SPC L ++P+ + YI FG K + F LG + L+G
Sbjct: 2 SLFAAFLGGIVSFFSPCILPLIPVYVTYI--FGGKKKN---FFNLFLFVLGFSIVFVLMG 56
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAIVM-GLNLLEIIELQLPSFFDNFDPRAAAANFPSS 238
AS GK + L ASG+ I++ GL ++ II+ P+F R N +
Sbjct: 57 ATASQLGKFFVSYKV-LFRKASGIIILLFGLYMMGIIK---PAFLS----REVKLNVSNK 108
Query: 239 VQAYLA----GLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
+ Y + G+ FA +PC P+LAT+L Y +G LL +Y+ G P ++A
Sbjct: 109 KEGYFSSFIFGIAFASGWTPCVGPILATILLYAGEQNTVYVGVLLLFAYSLGIGIPFIVA 168
Query: 295 ASFAGALQSLLSFRKF-SSWINPMSGALLLGGGLYTFLD 332
A ++ F +I + G L+ G+ + +
Sbjct: 169 AILIDRFKAFYKKMNFIMPYIEKIGGLFLIIFGILMYFN 207
>gi|333376257|ref|ZP_08468045.1| thiol:disulfide interchange protein DsbD [Kingella kingae ATCC
23330]
gi|332968545|gb|EGK07606.1| thiol:disulfide interchange protein DsbD [Kingella kingae ATCC
23330]
Length = 608
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 26/218 (11%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSG---KSRAQIIGDSIAFSLGLATTLALLGV 180
IFG GL S + C +LP+ I S K RA ++ S+ + GLA T +GV
Sbjct: 207 IFGLGL--SFTACMYPLLPIVSSIIVGDQSNTPNKKRAFML--SLVYVQGLALTYTSVGV 262
Query: 181 GASFAGKAYGQIGTGLP---LAASGLAIVMGLNLLEIIELQLPS----FFDNFDPRAAAA 233
A G A + P L+ SG+ I++ L++ + LQLPS +F N + +
Sbjct: 263 LAGLTG-ALLTVWLQQPIVVLSMSGVMILLALSMFGLFNLQLPSSLQAYFQNKSNKLSGG 321
Query: 234 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
+ ++ G+ AL PC P LA LGY+ + D L+GGTLL + G PL++
Sbjct: 322 K---TTSVFVMGMLSALIVGPCVAPPLAAALGYIGKTGDALLGGTLLYALALGTGVPLII 378
Query: 294 AASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
+F G + + W+N + G +LL +Y
Sbjct: 379 IGTFGGHIMP-----RAGVWMNGIKYAFGVILLAVAVY 411
>gi|75676399|ref|YP_318820.1| cytochrome c biogenesis protein, transmembrane region [Nitrobacter
winogradskyi Nb-255]
gi|74421269|gb|ABA05468.1| Cytochrome c biogenesis protein, transmembrane region [Nitrobacter
winogradskyi Nb-255]
Length = 244
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 89/207 (42%), Gaps = 28/207 (13%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYI-GAF--------GSGKSRAQIIGDSIAFSLGLATTLAL 177
AGLV+ LSPC L ++P L Y+ GA + S+ ++ ++ F G +T
Sbjct: 13 AGLVSFLSPCVLPLVPPYLIYLTGATIEHVSHDETAKTSKRAVMLAALMFVFGFSTVFVA 72
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
LG ASF G L + A + I+MGL+ L + + F R P
Sbjct: 73 LGASASFVGSFIRAWSAELSIVAGIVIIIMGLHFLGLTRI-------GFLMREGRLTAPK 125
Query: 238 SVQ---AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
V AY+ GL FA +PC P+LA +L A + G LL Y+ G P LLA
Sbjct: 126 PVGLWGAYVMGLAFAFGWTPCIGPILAAILSVAAAEATVVKGAGLLAVYSAGLGIPFLLA 185
Query: 295 ASFAGALQSLLSFRKFSSWINPMSGAL 321
A L +FSS N + L
Sbjct: 186 A---------LMIERFSSLFNRLKRHL 203
>gi|257063176|ref|YP_003142848.1| cytochrome c biogenesis protein [Slackia heliotrinireducens DSM
20476]
gi|256790829|gb|ACV21499.1| cytochrome c biogenesis protein [Slackia heliotrinireducens DSM
20476]
Length = 396
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 14/175 (8%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQI--IGDSIAFSLGLATTLALLGVGA 182
F AGL++ SPC L +LP+ +G + + + +++AF LG++TT +LG+GA
Sbjct: 10 FAAGLLSFFSPCVLPLLPVYIGLLTTDAGNQELGMVRRAANTVAFVLGISTTFLILGLGA 69
Query: 183 SFAGK----AYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSS 238
GK +Y I G+ + I GL L + L++P + N +
Sbjct: 70 GSIGKMLSNSYVAIVCGI------IIIFFGLYLAGL--LKIPFLTQEKRMDTSKLNTSTV 121
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
+ A+L GL F+ +PC P+L T+L A L G L L Y+ G P L+
Sbjct: 122 LGAFLLGLGFSFGWTPCIGPILGTVLAMAAQQGTALAGAGLTLVYSLGMCIPFLV 176
>gi|95929613|ref|ZP_01312355.1| cytochrome c biogenesis protein, transmembrane region
[Desulfuromonas acetoxidans DSM 684]
gi|95134310|gb|EAT15967.1| cytochrome c biogenesis protein, transmembrane region
[Desulfuromonas acetoxidans DSM 684]
Length = 246
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 16/231 (6%)
Query: 114 SALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIG--AFG-------SGKSRAQIIGDS 164
A + + +V F AGL++ SPC L ++P + YI +FG S K R Q+ S
Sbjct: 4 EAANIPTFSVAFSAGLLSFFSPCVLPLIPSFITYITGISFGELKQDHPSSKIRWQVASHS 63
Query: 165 IAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFD 224
+AF LG +T LLG+ A +A L + + G+++ + +
Sbjct: 64 LAFVLGFSTVFILLGIIAGSLNQAMQDWLIWLQRGGGLMIFLFGIHMTGLFHFGVLL--- 120
Query: 225 NFDPRAAAANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVA-TSKDPLIGGTLLLS 282
D R N PS + ++L G+ F+ SPC P+L + A TS D LL
Sbjct: 121 -GDKRVTIRNKPSGYLGSFLVGVAFSAGWSPCVGPILMAIFILAAGTSSDTAQAVLLLCC 179
Query: 283 YTTGYVAPLLLAA-SFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLD 332
Y+ G P +L+ F G L F+K + ++G L++ G+ F +
Sbjct: 180 YSAGLGIPFMLSGLLFHGFLNVFNRFKKHIRIMEIITGVLMIVVGIMLFFN 230
>gi|392373143|ref|YP_003204976.1| cytochrome c biogenesis protein CcdA [Candidatus Methylomirabilis
oxyfera]
gi|258590836|emb|CBE67131.1| Cytochrome c biogenesis protein CcdA [Candidatus Methylomirabilis
oxyfera]
Length = 249
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYI---------GAFGSGKSRAQIIGDSIAFSLGLATTLA 176
GAG+ + LSPC L + P L ++ G+ + K+R II +++ F LG +
Sbjct: 15 GAGIFSFLSPCVLPIFPSYLSFVTGLSFGELSGSVDNVKTRRAIILNALCFILGFSVVFM 74
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
LG S G+ L L I+ GL + L+LP F R + P
Sbjct: 75 SLGASFSLLGRLLFDYQQILRKVGGVLVILFGLYIAGF--LKLPFLARTF--RVELHDRP 130
Query: 237 SS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
+ + A++ G+TFA +PC P+L ++L Y +T+K +G +L +Y+ G P L+A
Sbjct: 131 AGYLGAFIVGVTFAAGWTPCVGPILGSILLYASTAKTAYMGILMLGAYSLGLAIPFFLSA 190
>gi|319898841|ref|YP_004158934.1| cytochrome c-type biogenesis protein [Bartonella clarridgeiae 73]
gi|319402805|emb|CBI76356.1| cytochrome c-type biogenesis protein [Bartonella clarridgeiae 73]
Length = 262
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 100/225 (44%), Gaps = 16/225 (7%)
Query: 115 ALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGY-----IGAFGSGKS------RAQIIGD 163
L F++ +V F AG ++ LSPC L ++P L Y I F S K R ++
Sbjct: 2 VLEFSTFSVFF-AGALSFLSPCVLPLVPPYLCYMAGVSIDDFQSEKQTRKASIRLVLLSS 60
Query: 164 SIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFF 223
IAF LG T +LG AS GK G +A+ + I+ GLN L + ++
Sbjct: 61 VIAFVLGFTTVFVVLGASASTLGKFIGYYRDWFAIASGIIIIIFGLNFLGVFKIGFLLRE 120
Query: 224 DNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSY 283
F R A + AY+ GL FA +PC P+L ++ T + G LL Y
Sbjct: 121 VRFQARKTPAG---PLGAYIIGLAFAFGWTPCIGPILGPIITLAGTKETVSEGAILLGVY 177
Query: 284 TTGYVAPLLLAASFAGALQSLL-SFRKFSSWINPMSGALLLGGGL 327
G P LLAA F+ + L +FR + + G L+ G+
Sbjct: 178 ALGLGVPFLLAALFSSSFMGFLRAFRIHLGKVEKIIGIFLIITGI 222
>gi|210134463|ref|YP_002300902.1| cytochrome C-type biogenesis protein CcdA [Helicobacter pylori P12]
gi|210132431|gb|ACJ07422.1| cytochrome C-type biogenesis protein CcdA [Helicobacter pylori P12]
Length = 239
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 16/210 (7%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ RA + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRASVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP--RAAAANFPSS 238
G S A + + + A G+ I+ GL+ L + +F A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRF---AFLYKTQSVGLASKSNSMQR 135
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SF 297
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 136 FYPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDTY-GLILMVVFVMGLAIPFLLVALML 193
Query: 298 AGALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 194 ERALLFLKSLKKYNRTIEIVSGLVLILMGI 223
>gi|290580400|ref|YP_003484792.1| cytochrome C biogenesis protein [Streptococcus mutans NN2025]
gi|254997299|dbj|BAH87900.1| putative cytochrome C biogenesis protein [Streptococcus mutans
NN2025]
Length = 237
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-------SIAFS 168
L ++ +F GL++ SPC L +LP+ +G + G K +II D + F
Sbjct: 3 LQHITILTLFIEGLLSFFSPCVLPILPVYIGILAGQGEEKQSGEIIWDRRKVFTNTFLFI 62
Query: 169 LGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
G+A T +L +S + L L ++MGL + +I+ S F N +
Sbjct: 63 SGIAATFFILAFASSLISQFLQSHIQFLQNLGGILILIMGLVQVGLIK----SHFFNREY 118
Query: 229 RAAAANFPSSVQ-----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSY 283
A + + + A+L G TF+ + +PC P+LA++ Y +T + + L+L Y
Sbjct: 119 SAKNKVYQAGQKVTPFIAFLMGFTFSFSWTPCIGPILASVFLYASTHQG-IYSVLLILIY 177
Query: 284 TTGYVAPLLLAASFAGALQSLLSFRK 309
G+V P L A F+ + S+ +K
Sbjct: 178 CLGFVIPFALIALFSQRVMSVFKKQK 203
>gi|420398339|ref|ZP_14897552.1| cytochrome c biogenesis protein [Helicobacter pylori CPY1962]
gi|393015013|gb|EJB16184.1| cytochrome c biogenesis protein [Helicobacter pylori CPY1962]
Length = 239
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASESNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVGGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|450009752|ref|ZP_21828278.1| putative cytochrome C biogenesis protein [Streptococcus mutans A19]
gi|450023108|ref|ZP_21830372.1| putative cytochrome C biogenesis protein [Streptococcus mutans
U138]
gi|449190651|gb|EMB92205.1| putative cytochrome C biogenesis protein [Streptococcus mutans A19]
gi|449193810|gb|EMB95180.1| putative cytochrome C biogenesis protein [Streptococcus mutans
U138]
Length = 237
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-------SIAFS 168
L ++ +F GL++ SPC L +LP+ +G + G K +II D + F
Sbjct: 3 LQHITILTLFIEGLLSFFSPCVLPILPVYIGILAGQGEEKQSGEIIWDRRKVFTNTFLFI 62
Query: 169 LGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
G+A T +L +S + L L ++MGL + +I+ S F N +
Sbjct: 63 SGIAATFFILAFASSLISQFLQSHIQFLQNLGGILILIMGLVQVGLIK----SHFFNREY 118
Query: 229 RAAAANFPSSVQ-----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSY 283
A + + + A+L G TF+ + +PC P+LA++ Y +T + + L+L Y
Sbjct: 119 SAKNKVYQAGQKITPLIAFLMGFTFSFSWTPCIGPILASVFLYASTHQG-IYSVLLILIY 177
Query: 284 TTGYVAPLLLAASFAGALQSLLSFRK 309
G+V P L A F+ + S+ +K
Sbjct: 178 CLGFVIPFALIALFSQRVMSVFKKQK 203
>gi|15611320|ref|NP_222971.1| cytochrome C-type biogenesis protein [Helicobacter pylori J99]
gi|4154767|gb|AAD05826.1| putative CYTOCHROME C-TYPE BIOGENESIS PROTEIN [Helicobacter pylori
J99]
Length = 239
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP--RAAAANFPSS 238
G S A + + + A G+ I+ GL+ L + +F A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRF---AFLYKTQSVGLASKSNSMQR 135
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SF 297
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 136 FYPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVMGLAIPFLLVALML 193
Query: 298 AGALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S RK++ I +SG +L+ G+
Sbjct: 194 ERALLFLKSLRKYNRAIEIVSGLVLILMGI 223
>gi|71278562|ref|YP_267702.1| thiol:disulfide interchange protein precursor [Colwellia
psychrerythraea 34H]
gi|123761086|sp|Q487R3.1|DSBD_COLP3 RecName: Full=Thiol:disulfide interchange protein DsbD; AltName:
Full=Protein-disulfide reductase; Short=Disulfide
reductase; Flags: Precursor
gi|71144302|gb|AAZ24775.1| thiol:disulfide interchange protein DsbD [Colwellia psychrerythraea
34H]
Length = 608
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 113/254 (44%), Gaps = 24/254 (9%)
Query: 100 SAGQQANEAVLG-----QLSALS-----FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIG 149
A QQ NE + QLS + +L F GL+ S +PC + P+ G I
Sbjct: 166 DAAQQTNEGEVKKSEQHQLSDMLKQDSLLLTLIAFFVGGLLLSFTPCVFPMYPILTGIIV 225
Query: 150 AFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIV--- 206
G G + + S + G+A T LLGV + AG + + P+ GL+I+
Sbjct: 226 GQGEGLTTKKAFTLSFFYVQGMAITYTLLGVVVAMAGAKFQAVFQH-PIVLIGLSILFIF 284
Query: 207 MGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYL-AGLTFALAASPCSTPVLATLLG 265
+ L++ + L LP+ + N + S+ L G+ L ASPC+T L L
Sbjct: 285 LALSMFGVFNLALPASWQNKLNNVSNKQKGGSITGVLMMGVISGLVASPCTTAPLTGALL 344
Query: 266 YVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMS---GALL 322
Y++ + D ++G + L + + G PLL+ S G L K +W+N + G LL
Sbjct: 345 YISQTGDVVLGASALYALSLGMGLPLLILGSSGGKL-----LPKAGAWMNIIKNIFGLLL 399
Query: 323 LGGGLYTFLDRLFP 336
L ++ L+R P
Sbjct: 400 LAVPVF-LLERFIP 412
>gi|262277536|ref|ZP_06055329.1| cytoChrome c-type biogenesis protein CcdA [alpha proteobacterium
HIMB114]
gi|262224639|gb|EEY75098.1| cytoChrome c-type biogenesis protein CcdA [alpha proteobacterium
HIMB114]
Length = 237
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 111/236 (47%), Gaps = 36/236 (15%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSG--------KSRAQIIGDSIAFSLGLATTLA 176
F AG V+ LSPC VLPL GYI +F +G K + I +++ F+LG +
Sbjct: 8 FFAGFVSFLSPC---VLPLIPGYI-SFINGTTLENLEDKKKNFIFKETLLFTLGFSVVFI 63
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFP 236
LG A+F G + T + I LN++ +++L+L + + +F
Sbjct: 64 SLGATATFFGSLIFKYSTFFTYFVGIVIIFFSLNMIGLLQLRLLN-------QELKYHFH 116
Query: 237 SSV----QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPL 291
+ + ++L G+ F SPC P+L ++L +A+ + + G +LLS Y+ G P
Sbjct: 117 NQITKPYMSFLVGIGFGFGWSPCIGPILGSVLA-LASLETTITKGIILLSIYSIGLAIPF 175
Query: 292 LLAASFAGAL--------QSLLSFRKFSSWINPMSGALLLGGGLYT---FLDRLFP 336
+L+ F +++ +K S +I ++G L++ G L T +L FP
Sbjct: 176 ILSGLFITKFLIFSKKTRMHIINIQKISGYILLITGVLIVTGKLQTLGYYLLDWFP 231
>gi|450034751|ref|ZP_21834605.1| putative cytochrome C biogenesis protein [Streptococcus mutans M21]
gi|450097695|ref|ZP_21857615.1| putative cytochrome C biogenesis protein [Streptococcus mutans SF1]
gi|450109677|ref|ZP_21861617.1| putative cytochrome C biogenesis protein [Streptococcus mutans SM6]
gi|450169052|ref|ZP_21882784.1| putative cytochrome C biogenesis protein [Streptococcus mutans SM4]
gi|449196277|gb|EMB97562.1| putative cytochrome C biogenesis protein [Streptococcus mutans M21]
gi|449222414|gb|EMC22142.1| putative cytochrome C biogenesis protein [Streptococcus mutans SF1]
gi|449226033|gb|EMC25598.1| putative cytochrome C biogenesis protein [Streptococcus mutans SM6]
gi|449247870|gb|EMC46139.1| putative cytochrome C biogenesis protein [Streptococcus mutans SM4]
Length = 237
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-------SIAFS 168
L ++ +F GL++ SPC L +LP+ +G + G K +II D + F
Sbjct: 3 LQHITILTLFIEGLLSFFSPCVLPILPVYIGILAGQGEEKQSGEIIWDRRKVFINTFLFI 62
Query: 169 LGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
G+A T +L +S + L L ++MGL + +I+ S F N +
Sbjct: 63 SGIAATFFILAFASSLISQFLQSHIQFLQNLGGILILIMGLVQVGLIK----SHFFNREY 118
Query: 229 RAAAANFPSSVQ-----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSY 283
A + + + A+L G TF+ + +PC P+LA++ Y +T + + L+L Y
Sbjct: 119 SAKNKVYQAGQKVTPLIAFLMGFTFSFSWTPCIGPILASVFLYASTHQG-IYSVLLILIY 177
Query: 284 TTGYVAPLLLAASFAGALQSLLSFRK 309
G+V P L A F+ + S+ +K
Sbjct: 178 CLGFVIPFALIALFSQRVMSVFKKQK 203
>gi|414172311|ref|ZP_11427222.1| hypothetical protein HMPREF9695_00868 [Afipia broomeae ATCC 49717]
gi|410893986|gb|EKS41776.1| hypothetical protein HMPREF9695_00868 [Afipia broomeae ATCC 49717]
Length = 246
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 91/201 (45%), Gaps = 13/201 (6%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFG----------SGKSRAQIIGDSI 165
+S S+A GAG+++ LSPC L ++P L ++ + +++ S
Sbjct: 2 VSSISIAGALGAGVLSFLSPCVLPLVPPYLCFLAGISIDDLTREDKRGWRPDWRVVALSF 61
Query: 166 AFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDN 225
AF LG AT LG AS GK L + A + I++GL+ L + + L
Sbjct: 62 AFVLGFATVFVALGASASALGKTVTAYFDTLAIVAGVIIIILGLHFLGLFRIGLLFREAR 121
Query: 226 FDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTT 285
F A A F V AY+ GL FA +PC PVLA +L G LL +Y
Sbjct: 122 FQTVARPAGF---VGAYIVGLAFAFGWTPCVGPVLAAILVVAGVEGSAARGALLLGAYAL 178
Query: 286 GYVAPLLLAASFAGALQSLLS 306
G P +LA+ F+G +++
Sbjct: 179 GIGIPFMLASLFSGPFMRMMA 199
>gi|345017484|ref|YP_004819837.1| cytochrome c biogenesis transmembrane protein [Thermoanaerobacter
wiegelii Rt8.B1]
gi|344032827|gb|AEM78553.1| cytochrome c biogenesis protein transmembrane region
[Thermoanaerobacter wiegelii Rt8.B1]
Length = 218
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASF 184
F AG+V+ LSPC L ++P + YI FG+ K+ + + F LG + L+G AS
Sbjct: 7 FLAGIVSFLSPCVLPLIPAYVSYI--FGNKKNN---LINLFLFVLGFSIVFVLMGATASQ 61
Query: 185 AGK---AYGQIGTGLPLAASGLAIVM-GLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
GK AY I SG+ IV+ GL + I P F + N
Sbjct: 62 LGKLFLAYKDIFR----KVSGIIIVLFGLQMTGIFR---PLFLNK---EVKLINMEKVQT 111
Query: 241 AYLA----GLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
Y+ G+TFA +PC P+LA++L Y +G LL +Y+ G P ++ A
Sbjct: 112 GYIGSLVLGITFAAGWTPCVGPILASILLYAGAVSTLSVGVILLFAYSMGLGIPFIVTAL 171
Query: 297 FAGALQSLLS-FRKFSSWINPMSGALLLGGGLYTFLDRL 334
+S+ K +I +SG +L+ G+ + + L
Sbjct: 172 LIDKFKSMYKRINKILPYIEVISGVILIIFGVLLYFNML 210
>gi|289578192|ref|YP_003476819.1| cytochrome C biogenesis protein transmembrane region
[Thermoanaerobacter italicus Ab9]
gi|289527905|gb|ADD02257.1| cytochrome c biogenesis protein transmembrane region
[Thermoanaerobacter italicus Ab9]
Length = 218
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASF 184
F AG+V+ LSPC L ++P + YI FG+ K+ + + + F LG + L+G AS
Sbjct: 7 FLAGIVSFLSPCVLPLIPAYVSYI--FGNKKNN---LTNLLLFVLGFSIVFVLMGATASQ 61
Query: 185 AGK---AYGQIGTGLPLAASGLAIVM-GLNLLEIIELQLPSFFDNFDPRAAAANFPSS-V 239
GK AY I SG+ IV+ GL + I P F + N + +
Sbjct: 62 IGKLFLAYKDIFR----KVSGIIIVLFGLQMTGIFR---PLFLNKEIKLINMENVQTGYI 114
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTG----YVAPLLLAA 295
+ + G+TFA +PC P+LA++L Y + +G LL +Y+ G ++ LL
Sbjct: 115 GSLVLGVTFAAGWTPCVGPILASILLYAGSVSTLNVGVILLFAYSMGLGIPFIVTALLID 174
Query: 296 SFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
F G + + K +I +SG +L+ G+ + + L
Sbjct: 175 KFKGMYKRI---NKILPYIEVVSGVILIIFGVLLYFNML 210
>gi|403380927|ref|ZP_10922984.1| cytochrome c-type biogenesis protein CcdA [Paenibacillus sp. JC66]
Length = 237
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 106/227 (46%), Gaps = 15/227 (6%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAF-------GSGKSRAQIIGDSIAFSLGLA 172
S+ ++FGAG+++ +SPC L + P L YI G G + + + + F LG +
Sbjct: 7 SIWLVFGAGVLSFISPCCLPLYPSYLSYITGVSVKDLQEGRGMFQQRAMLHTAFFMLGFS 66
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
LG S G + T + L +MGL ++ I + ++ F +
Sbjct: 67 IIFIALGWSLSLVGSLFANYQTLIRQLGGVLVALMGLVMMGIFKPKMLLKDLRFSLPSKP 126
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
+ SV L G+T+A +PC P+L +L ++ D + T +SYT G+ P
Sbjct: 127 VGYTGSV---LVGMTYAAGWTPCVGPILGAVLAMAVSNPDQALLYT--VSYTLGFAVPFF 181
Query: 293 LAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFPTTM 339
+ A F G + ++ K+S+ I + GA+++ G+ + D++ T+
Sbjct: 182 VMAFFIGRTKWII---KYSNRIMKIGGAVMVLVGILLYTDKMTDITI 225
>gi|449960692|ref|ZP_21810706.1| putative cytochrome C biogenesis protein [Streptococcus mutans
4VF1]
gi|450136917|ref|ZP_21871295.1| putative cytochrome C biogenesis protein [Streptococcus mutans
NLML1]
gi|449167307|gb|EMB70198.1| putative cytochrome C biogenesis protein [Streptococcus mutans
4VF1]
gi|449235961|gb|EMC34899.1| putative cytochrome C biogenesis protein [Streptococcus mutans
NLML1]
Length = 237
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-------SIAFS 168
L ++ +F GL++ SPC L +LP+ +G + G K +II D + F
Sbjct: 3 LQHITILTLFIEGLLSFFSPCVLPILPVYIGILAGQGEEKQSGEIIWDRRKVFTNTFLFI 62
Query: 169 LGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
G+A T +L +S + L L ++MGL + +I+ S F N +
Sbjct: 63 SGIAATFFILAFASSLISQFLQSHIQFLQNLGGILILIMGLVQVGLIK----SHFFNREY 118
Query: 229 RAAAANFPSSVQ-----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSY 283
A + + + A+L G TF+ + +PC P+LA++ Y +T + + L+L Y
Sbjct: 119 SAKNKVYQAGQKVTPLIAFLMGFTFSFSWTPCIGPILASVFLYASTHQG-IYSVLLILIY 177
Query: 284 TTGYVAPLLLAASFAGALQSLLSFRK 309
G+V P L A F+ + S+ +K
Sbjct: 178 CLGFVIPFALIALFSQRVMSVFKKQK 203
>gi|384899396|ref|YP_005774776.1| cytochrome c biogenesis protein [Helicobacter pylori F30]
gi|317179340|dbj|BAJ57128.1| cytochrome c biogenesis protein [Helicobacter pylori F30]
Length = 239
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASESNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVGGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRTIEIVSGLVLILMGI 223
>gi|269217326|ref|ZP_06161180.1| cytochrome c biogenesis membrane protein [Slackia exigua ATCC
700122]
gi|269129463|gb|EEZ60548.1| cytochrome c biogenesis membrane protein [Slackia exigua ATCC
700122]
Length = 410
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIG-----DSIAFSLGLATTLALLG 179
F AGL++ SPC L +LP+ YIG S + ++ G +IAF LG++ T +LG
Sbjct: 10 FVAGLLSFFSPCILPLLPV---YIGLLTSDANDQELGGVQRATRTIAFVLGISATFLVLG 66
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAI-VMGLNLLEIIELQLPSFFDNFDPRAAAANFPSS 238
+GA G A + G A G+ I + GL+L +I++ L FD + N +
Sbjct: 67 LGAGAVGHA---LSNGYVAIACGVVIFIFGLHLSGLIQIPLLQREKRFD--TSKLNVRTV 121
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFA 298
A+L GL F+ +PC P+L ++L A G L L Y+ G P L+ +
Sbjct: 122 AGAFLLGLGFSFGWTPCIGPILGSVLALAAQQGTAAAGAALTLVYSLGMSIPFLIITLAS 181
Query: 299 GAL-QSLLSFRKFSSWINPMSGALLLGGGLY 328
AL + S ++ I + GAL+ GL+
Sbjct: 182 NALIGRVRSLNRYLPTIQRIGGALIAIMGLW 212
>gi|154247709|ref|YP_001418667.1| cytochrome c biogenesis protein transmembrane subunit [Xanthobacter
autotrophicus Py2]
gi|154161794|gb|ABS69010.1| cytochrome c biogenesis protein transmembrane region [Xanthobacter
autotrophicus Py2]
Length = 243
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 98/222 (44%), Gaps = 28/222 (12%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-------------SI 165
+L F AGLV+ +SPC L ++P L ++G G + + GD ++
Sbjct: 4 VTLPAAFLAGLVSFVSPCVLPLVPPYLCFLG----GSTLDDLAGDEPVKEVGRRAMVGAV 59
Query: 166 AFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDN 225
F G + +LG GAS G L + A IVMGLN L + + L
Sbjct: 60 LFVAGFSVVFVMLGAGASAIGDLLRAHLDVLSIIAGLAIIVMGLNFLGVFRIHLLH---- 115
Query: 226 FDPRAAAANF--PSSVQ-AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS 282
R A A+ P+ + A++ GL FA +PC PVL +L + G LL
Sbjct: 116 ---RTARAHVHEPTGIWGAFVMGLAFAFGWTPCLGPVLGAILAVAGSEATVSKGAGLLAI 172
Query: 283 YTTGYVAPLLLAA-SFAGALQSLLSFRKFSSWINPMSGALLL 323
Y+ G P LLAA + L+SL+ RK + GALL+
Sbjct: 173 YSLGLGVPFLLAAFAVRPFLKSLVHMRKILPVVEKAMGALLV 214
>gi|424034319|ref|ZP_17773725.1| disulfide interchange protein DsbD [Vibrio cholerae HENC-01]
gi|408873143|gb|EKM12347.1| disulfide interchange protein DsbD [Vibrio cholerae HENC-01]
Length = 611
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGK-SRAQIIGDSIAFSLGLATTLALLGVGASF 184
G GL + +PC L + P+ + GSGK S+++ +G S + G+A T LLG+ +
Sbjct: 218 GVGL--AFTPCVLPMYPILTSIV--LGSGKLSQSRALGLSFVYVQGMALTYTLLGLVVAS 273
Query: 185 AGKAYGQIGTGLPLAASGLAIV---MGLNLLEIIELQLPS----FFDNFDPRAAAANFPS 237
AG + Q P GL+++ + L++ + LQLPS + +N + S
Sbjct: 274 AGMQF-QAAMQHPYVLIGLSVLFVTLALSMFGVYNLQLPSGVQTWLNNLSNKQQGG---S 329
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
S + G L SPC+T L+ L YVA S D L GG L + G PL+L A F
Sbjct: 330 SAGVFAMGAISGLVCSPCTTAPLSGALLYVAQSGDLLTGGIALYALAMGMGIPLILVAVF 389
Query: 298 AGALQSLLSFRKFSSWINPMS---GALLLGGGLYTFLDRLFPTTMA 340
L K W++ + G +LL ++ L+R+ P A
Sbjct: 390 GNKL-----LPKAGGWMDRVKTLFGFILLAAPIF-LLERILPEMWA 429
>gi|421709667|ref|ZP_16149026.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori R018c]
gi|421722919|ref|ZP_16162176.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori R056a]
gi|407211112|gb|EKE80981.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori R018c]
gi|407225287|gb|EKE95058.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori R056a]
Length = 239
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP--RAAAANFPSS 238
G S A + + + A G+ I+ GL+ L + SF A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRF---SFLYKTQSVGLASKSNSMQR 135
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SF 297
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 136 FYPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVMGLAIPFLLVALML 193
Query: 298 AGALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 194 ERALLFLKSLKKYNRTIEIVSGLVLILMGI 223
>gi|385217031|ref|YP_005778507.1| cytochrome c biogenesis protein [Helicobacter pylori F16]
gi|317177080|dbj|BAJ54869.1| cytochrome c biogenesis protein [Helicobacter pylori F16]
Length = 239
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVAGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVVGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|229916130|ref|YP_002884776.1| cytochrome c biogenesis protein transmembrane region
[Exiguobacterium sp. AT1b]
gi|229467559|gb|ACQ69331.1| cytochrome c biogenesis protein transmembrane region
[Exiguobacterium sp. AT1b]
Length = 232
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 105/224 (46%), Gaps = 22/224 (9%)
Query: 119 TSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD----------SIAFS 168
+L + FGAG+++ LSPCTL + P+ L YI +G S +++ + + +F
Sbjct: 3 VTLWLAFGAGVLSFLSPCTLPLYPVFLSYI----TGVSVSELKNEGLKQRTAWFHTFSFL 58
Query: 169 LGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
G + +LG+ S + Q L + + L V G+ L + + Q D
Sbjct: 59 FGFSIVFLVLGLSTSLIADVFIQYKDSLRMFGAILIFVFGVFLAGLWQPQFMMREKKMDI 118
Query: 229 RAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYV 288
+ + +V L G+ FA +PC+ P+LA ++ AT +P G +L+Y G+
Sbjct: 119 GERKSGYFGTV---LIGIGFAAGWTPCTGPILAGVIALAAT--NPSQGLGYMLAYVIGFA 173
Query: 289 APLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLD 332
P L+ +F G ++ L + S+ + + G L++ G+ + D
Sbjct: 174 IPFLVMVAFVGKIKYL---ARNSAKVAKVGGYLMMAFGVLLYFD 214
>gi|345019791|ref|ZP_08783404.1| holocytochrome c synthase [Ornithinibacillus scapharcae TW25]
Length = 234
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 31/225 (13%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-----------SIAFSLGLAT 173
FGAG ++ +SPC L + P L YI +G S ++I D +I F +G ++
Sbjct: 10 FGAGFLSFISPCVLPLYPAFLSYI----TGMSVSEIKEDNKMISRNSIIHTICFLIGFSS 65
Query: 174 TLALLGVGASFAGK---AYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRA 230
++G SF + AY I + + L I GL ++ I + F D +
Sbjct: 66 IFLVIGFATSFLAEFLVAYQDI---IRQVGALLIIFFGLVIVGIFNFK----FLMKDKKI 118
Query: 231 AAANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVA 289
N PS + + L GL F+L +PC+ P+L + + + DP G ++++Y G+
Sbjct: 119 TFKNRPSGFLGSLLIGLAFSLGWTPCTGPILGVV--FTLAANDPSRGMVMMIAYILGFSI 176
Query: 290 PLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
P + + F G L + ++ S + + G ++ G+ F D +
Sbjct: 177 PFFVLSFFVGKLGWI---KRHSLKLVKIGGYFMIALGIALFFDWM 218
>gi|424035264|ref|ZP_17774548.1| disulfide interchange protein DsbD [Vibrio cholerae HENC-02]
gi|408897990|gb|EKM33581.1| disulfide interchange protein DsbD [Vibrio cholerae HENC-02]
Length = 611
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGK-SRAQIIGDSIAFSLGLATTLALLGVGASF 184
G GL + +PC L + P+ + GSGK S+++ +G S + G+A T LLG+ +
Sbjct: 218 GVGL--AFTPCVLPMYPILTSIV--LGSGKLSQSRALGLSFVYVQGMALTYTLLGLVVAS 273
Query: 185 AGKAYGQIGTGLPLAASGLAIV---MGLNLLEIIELQLPS----FFDNFDPRAAAANFPS 237
AG + Q P GL+++ + L++ + LQLPS + +N + S
Sbjct: 274 AGMQF-QAAMQHPYVLIGLSVLFVTLALSMFGVYNLQLPSGVQTWLNNLSNKQQGG---S 329
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
S + G L SPC+T L+ L YVA S D L GG L + G PL+L A F
Sbjct: 330 SAGVFAMGAISGLVCSPCTTAPLSGALLYVAQSGDLLTGGIALYALAMGMGIPLILVAVF 389
Query: 298 AGALQSLLSFRKFSSWINPMS---GALLLGGGLYTFLDRLFPTTMA 340
L K W++ + G +LL ++ L+R+ P A
Sbjct: 390 GNKL-----LPKAGGWMDRVKTLFGFILLAAPIF-LLERILPEMWA 429
>gi|385226530|ref|YP_005786454.1| cytochrome c biogenesis protein [Helicobacter pylori SNT49]
gi|344331443|gb|AEN16473.1| cytochrome c biogenesis protein [Helicobacter pylori SNT49]
Length = 239
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP--RAAAANFPSS 238
G S A + + + A G+ I+ GL+ L + SF A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRF---SFLYKTQSVGLASKSNSMQR 135
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SF 297
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 136 FYPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDTY-GLILMVVFVMGLAIPFLLVALML 193
Query: 298 AGALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 194 ERALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|297544473|ref|YP_003676775.1| cytochrome c biogenesis protein transmembrane subunit
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|296842248|gb|ADH60764.1| cytochrome c biogenesis protein transmembrane region
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
Length = 218
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 104/219 (47%), Gaps = 24/219 (10%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASF 184
F AG+V+ LSPC L ++P + YI FG+ K+ + + + F LG + L+G AS
Sbjct: 7 FLAGIVSFLSPCVLPLIPAYVSYI--FGNKKNN---LTNLLLFVLGFSIVFVLMGATASQ 61
Query: 185 AGK---AYGQIGTGLPLAASGLAIVM-GLNLLEIIELQLPSFFDNFDPRAAAANFPSS-V 239
GK AY I SG+ IV+ GL + I P F + N + +
Sbjct: 62 IGKLFLAYKDIFR----KVSGIIIVLFGLQMTGIFR---PLFLNKEIKLINMENVQTGYI 114
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA---- 295
+ + G+TFA +PC P+LA++L Y + +G LL +Y+ G P ++ A
Sbjct: 115 GSLVLGVTFAAGWTPCVGPILASILLYAGSVSTLSVGVILLFAYSMGLGIPFIITALLID 174
Query: 296 SFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
F G + + K +I +SG +L+ G+ + + L
Sbjct: 175 KFKGMYKRI---NKILPYIEVVSGIILIIFGVLLYFNML 210
>gi|422851665|ref|ZP_16898335.1| cytochrome c-type biogenesis protein CcdA [Streptococcus sanguinis
SK150]
gi|325694553|gb|EGD36462.1| cytochrome c-type biogenesis protein CcdA [Streptococcus sanguinis
SK150]
Length = 235
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 111/239 (46%), Gaps = 32/239 (13%)
Query: 114 SALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRA--QIIGDSIA----- 166
S L F S +F AG+++ SPC +LP+ YIG K ++ G +A
Sbjct: 3 SPLFFVS---VFLAGILSFFSPCIFPLLPV---YIGILLDDKEVKTLKVFGRELAWQGMV 56
Query: 167 ----FSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEII---ELQL 219
F G++T LLG GA F G + GL I++GL+ +E+I +LQ+
Sbjct: 57 RTLFFIAGISTVFFLLGFGAGFLGTII--YSSTFRYVMGGLIILLGLHQMELINIRQLQI 114
Query: 220 PSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKD-PLIGGT 278
F +F S A+L G+TF+ +PC P+L+++L A+ + L G
Sbjct: 115 QKSL-TFKKNGQKHHFWS---AFLLGITFSFGWTPCIGPILSSVLALAASGGNGALQGAI 170
Query: 279 LLLSYTTGYVAPLL---LAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
L L YT G P L LA+SF +Q + + + + GAL++ G+ L +L
Sbjct: 171 LTLIYTLGMALPFLILALASSF--VMQYFNKIKPYMGLMKKIGGALIILMGILLMLGQL 227
>gi|420530795|ref|ZP_15029170.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-28b]
gi|393138821|gb|EJC39202.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp P-28b]
Length = 239
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP--RAAAANFPSS 238
G S A + + + A G+ I+ GL+ L + SF A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRF---SFLYKTQSVGLASKSNSMQR 135
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SF 297
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 136 FYPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVMGLAIPFLLVALML 193
Query: 298 AGALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 194 ERALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|420413225|ref|ZP_14912349.1| cytochrome c biogenesis protein [Helicobacter pylori NQ4099]
gi|393029212|gb|EJB30293.1| cytochrome c biogenesis protein [Helicobacter pylori NQ4099]
Length = 239
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP--RAAAANFPSS 238
G S A + + + A G+ I+ GL+ L + SF A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRF---SFLYKTQSVGLASKSNSMQR 135
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SF 297
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 136 FYPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLILMVVFVMGLAIPFLLVALML 193
Query: 298 AGALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 194 ERALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|257457985|ref|ZP_05623144.1| cytochrome c-type biogenesis protein CcdA [Treponema vincentii ATCC
35580]
gi|257444698|gb|EEV19782.1| cytochrome c-type biogenesis protein CcdA [Treponema vincentii ATCC
35580]
Length = 267
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 108/216 (50%), Gaps = 30/216 (13%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS----------RAQIIGDSIAFSLGLATT 174
F AGL++ LSPC L ++P+ L +I SG+S R ++ SI+F LG
Sbjct: 13 FFAGLLSFLSPCVLPLIPVYLSFI----SGESLAEIREGGSGRMRLFLRSISFVLGFTAV 68
Query: 175 LALL----GVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLL-EIIELQLPSFFDNFDPR 229
LL G GA F G + ++ + A + I++GLN+L + I F + +
Sbjct: 69 FVLLAILFGTGARFIGSSAPRM---IMRGAGVVVIILGLNMLFDFIP------FLRGEVK 119
Query: 230 AAAANFPSSV-QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYV 288
A A N +S +A+L G+ FA SPC P+L+++L + A + + + LL +Y+ G
Sbjct: 120 AQAPNNAASFSKAFLFGMLFAAGWSPCIGPILSSILLFAAQAGNIVKAAFLLGAYSLGLG 179
Query: 289 APLLLAASFAGALQSLLS-FRKFSSWINPMSGALLL 323
P LL F + +L F++ + + +G L++
Sbjct: 180 IPFLLVGLFFDKAEPVLRWFKRHTRGVKITAGLLII 215
>gi|217033444|ref|ZP_03438874.1| hypothetical protein HP9810_1g58 [Helicobacter pylori 98-10]
gi|216944149|gb|EEC23577.1| hypothetical protein HP9810_1g58 [Helicobacter pylori 98-10]
Length = 239
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASESNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVGGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|420395006|ref|ZP_14894237.1| cytochrome c biogenesis protein [Helicobacter pylori CPY1124]
gi|420397055|ref|ZP_14896273.1| cytochrome c biogenesis protein [Helicobacter pylori CPY1313]
gi|393012717|gb|EJB13895.1| cytochrome c biogenesis protein [Helicobacter pylori CPY1313]
gi|393015770|gb|EJB16935.1| cytochrome c biogenesis protein [Helicobacter pylori CPY1124]
Length = 239
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVGGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|374315112|ref|YP_005061540.1| cytochrome c biogenesis protein [Sphaerochaeta pleomorpha str.
Grapes]
gi|359350756|gb|AEV28530.1| cytochrome c biogenesis protein [Sphaerochaeta pleomorpha str.
Grapes]
Length = 222
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 4/205 (1%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYI-GAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGAS 183
F G+++ +SPC L +LPL Y+ G G+ + +I +S+AF G LG ++
Sbjct: 7 FLEGIISFISPCILPILPLYFSYLAGGVSDGEHKGVLIRNSLAFVAGFTLLFVALGAAST 66
Query: 184 FAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYL 243
G+ + + L L I+ LN L + +P+F D + + + ++ L
Sbjct: 67 AVGQFLSEHLSLLNRIGGVLVILFALNNLGV--FFIPAFNDTHKFQLKSMKNMTVGKSIL 124
Query: 244 AGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQS 303
G+ FA+ +PC P+L + L A + G LL Y G P L AA L+
Sbjct: 125 FGIVFAVGWTPCVGPLLGSALMMAANASLLWKGMATLLCYALGLGVPFLFAALLLEQLEG 184
Query: 304 LL-SFRKFSSWINPMSGALLLGGGL 327
+ + +K S I+ +SG LLL G+
Sbjct: 185 VFQAIKKHSKVISLVSGLLLLAFGI 209
>gi|449902851|ref|ZP_21791782.1| putative cytochrome C biogenesis protein [Streptococcus mutans
M230]
gi|449262142|gb|EMC59599.1| putative cytochrome C biogenesis protein [Streptococcus mutans
M230]
Length = 237
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-------SIAFS 168
L ++ +F GL++ SPC L +LP+ +G + G K +II D + F
Sbjct: 3 LQHITILTLFIEGLLSFFSPCVLPILPVYIGILAGQGEEKQSGEIIWDRRKVFTNTFLFI 62
Query: 169 LGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
G+A T +L +S + L L ++MGL + +I+ S F N +
Sbjct: 63 SGIAATFFILAFASSLISQFLQSHIQFLQNLGGILILIMGLVQVGLIK----SHFFNREY 118
Query: 229 RAAAANFPSSVQ-----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSY 283
A + + + A+L G TF+ + +PC P+LA++ Y A++ + L+L Y
Sbjct: 119 SAKNKVYQAGQKVTPLIAFLMGFTFSFSWTPCIGPILASVFLY-ASTHQSIYSVLLILIY 177
Query: 284 TTGYVAPLLLAASFA----GALQSLLSFRKFSS 312
G+V P L A F+ G + F K+S
Sbjct: 178 CLGFVIPFALVALFSQRVMGVFKKQKRFLKYSK 210
>gi|315613474|ref|ZP_07888382.1| cytochrome c-type biogenesis protein CcdA [Streptococcus sanguinis
ATCC 49296]
gi|315314470|gb|EFU62514.1| cytochrome c-type biogenesis protein CcdA [Streptococcus sanguinis
ATCC 49296]
Length = 236
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 27/211 (12%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYI------GAFGSGKSRAQIIG--DSIAFSLGLATTL 175
+F AG+++ SPC L VLP+ G + SGK ++ ++AF G++
Sbjct: 10 VFLAGILSFFSPCILPVLPVYAGVLLDDKDGAQASSGKFSISVVSLLRTLAFIAGISFIF 69
Query: 176 ALLGVGASFAGK----AYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAA 231
LLG GA F G ++ Q TG + I++GL+ +E++ LQ +
Sbjct: 70 ILLGYGAGFLGNLLYTSWFQYVTG------AIIILLGLHQMEVLHLQGLYKERRLQLKRQ 123
Query: 232 AANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAT-SKDPLIGGTLLLSYTTGYVAP 290
QA+L GLTF+ A +PC PVL ++L A+ G L+L YT G P
Sbjct: 124 GQKGNGYSQAFLLGLTFSFAWTPCVGPVLGSVLALAASGGSGAWQGAGLMLVYTLGLALP 183
Query: 291 LL---LAASFAGALQSLLSFRKFSSWINPMS 318
L LA+S+ L FRK ++ +
Sbjct: 184 FLVLALASSYV-----LKHFRKLHPYLGTLK 209
>gi|421717829|ref|ZP_16157130.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori R038b]
gi|407222621|gb|EKE92419.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori R038b]
Length = 239
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP--RAAAANFPSS 238
G S A + + + A G+ I+ GL+ L + SF A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRF---SFLYKTQSVGLASKSNSMQR 135
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SF 297
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 136 FYPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVMGLAIPFLLVALML 193
Query: 298 AGALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 194 ERALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|449965051|ref|ZP_21811666.1| putative cytochrome C biogenesis protein [Streptococcus mutans
15VF2]
gi|449171840|gb|EMB74487.1| putative cytochrome C biogenesis protein [Streptococcus mutans
15VF2]
Length = 258
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-------SIAFS 168
L ++ +F GL++ SPC L +LP+ +G + G K +II D + F
Sbjct: 24 LQHITILTLFIEGLLSFFSPCVLPILPVYIGILAGQGEEKQSGEIIWDRRKVFTNTFLFI 83
Query: 169 LGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
G+A T +L +S + L L ++MGL + +I+ S F N +
Sbjct: 84 SGIAATFFILAFASSLISQFLQSHIQFLQNLGGILILIMGLVQVGLIK----SHFFNREY 139
Query: 229 RAAAANFPSSVQ-----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSY 283
A + + + A+L G TF+ + +PC P+LA++ Y A++ + L+L Y
Sbjct: 140 SAKNKVYQAGQKVTPLIAFLMGFTFSFSWTPCIGPILASVFLY-ASTHQSIYSVLLILIY 198
Query: 284 TTGYVAPLLLAASFA----GALQSLLSFRKFSS 312
G+V P L A F+ G + F K++
Sbjct: 199 CLGFVIPFALVALFSQRVMGVFKKQKRFLKYTK 231
>gi|325971010|ref|YP_004247201.1| cytochrome C biogenesis protein transmembrane region [Sphaerochaeta
globus str. Buddy]
gi|324026248|gb|ADY13007.1| cytochrome c biogenesis protein transmembrane region [Sphaerochaeta
globus str. Buddy]
Length = 223
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 11/209 (5%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYI--GAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGA 182
F G+++ +SPC L +LPL Y+ G + + ++ +SIAF +G LG +
Sbjct: 7 FLEGIISFISPCILPILPLYFSYLAGGVVQKDQEKGVLLKNSIAFVVGFTILFVALGAAS 66
Query: 183 SFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA---ANFPSSV 239
+ GK L L I+ LN L + +P+ DN + + N P S+
Sbjct: 67 TTVGKYLSTHLLLLNRIGGVLVILFALNNLGFV--LIPALNDNHKVQMKSLKNMNIPKSM 124
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
L GL FA+ +PC P+L + L A ++ G L Y G P L +A
Sbjct: 125 ---LFGLVFAIGWTPCVGPLLGSALMMAANAELVYKGMLTLFFYAMGLAIPFLFSALLLE 181
Query: 300 ALQSLLS-FRKFSSWINPMSGALLLGGGL 327
L+ + S +K + I +SG LL G+
Sbjct: 182 QLEGVFSTIKKHAKLITIISGLFLLAFGV 210
>gi|322375557|ref|ZP_08050069.1| cytochrome c-type biogenesis protein CcdA [Streptococcus sp. C300]
gi|321279265|gb|EFX56306.1| cytochrome c-type biogenesis protein CcdA [Streptococcus sp. C300]
Length = 236
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 102/222 (45%), Gaps = 37/222 (16%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQI-----------IGDSIAFSLGLA 172
+F AG+++ SPC L +LP+ Y G K+ AQ + ++AF G++
Sbjct: 10 VFLAGILSFFSPCILPLLPV---YAGVLLDDKNDAQASSGKFSISVVSLLRTLAFIAGIS 66
Query: 173 TTLALLGVGASFAGK----AYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
LLG GA F G ++ Q TG + I++GL+ ++++ LQ
Sbjct: 67 FVFILLGYGAGFLGNLLYASWFQYVTG------AIIILLGLHQMDVLHLQGLYKERRLQL 120
Query: 229 RAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAT-SKDPLIGGTLLLSYTTGY 287
+ N QA+L GLTF+ A +PC PVL ++L A+ G L+L YT G
Sbjct: 121 KRQDQNANGYSQAFLLGLTFSFAWTPCVGPVLGSVLALAASGGSGAWQGAGLMLLYTLGL 180
Query: 288 VAPLL---LAASFAGALQSLLSFRKFSSWINPMSGALLLGGG 326
P L LA+S+ L FRK ++P G L GG
Sbjct: 181 ALPFLVLALASSYV-----LKHFRK----LHPYLGTLKKVGG 213
>gi|291615306|ref|YP_003525463.1| Cytochrome C biogenesis protein transmembrane region [Sideroxydans
lithotrophicus ES-1]
gi|291585418|gb|ADE13076.1| cytochrome c biogenesis protein transmembrane region [Sideroxydans
lithotrophicus ES-1]
Length = 594
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 87/180 (48%), Gaps = 3/180 (1%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASF 184
FGAGL+ SL+PC ++P+ G I G + S+A+ LG+A T A+ GV A +
Sbjct: 187 FGAGLLLSLTPCVFPMIPILSGIIVGRGHKITHMHAFFLSLAYVLGMAITYAIAGVAAGY 246
Query: 185 AGKAYGQ-IGTGLPLAA-SGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAY 242
+G + T L + + + +V+ L + + ELQLP+ + + +
Sbjct: 247 SGNLISNALQTPWVLGSFAAVFVVLSLAMFGLYELQLPTALQSRLSDTSNKLHGGHISGV 306
Query: 243 LA-GLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGAL 301
A G A+ PC LA L Y++ + D ++GG L G APLLL + AGAL
Sbjct: 307 FAMGALSAIIMGPCVAAPLAGALLYISQTHDAVLGGVALFVLALGMGAPLLLIGTSAGAL 366
>gi|402773418|ref|YP_006592955.1| cytochrome c biogenesis protein transmembrane region [Methylocystis
sp. SC2]
gi|401775438|emb|CCJ08304.1| Cytochrome c biogenesis protein transmembrane region [Methylocystis
sp. SC2]
Length = 242
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG--------SGKSRAQIIGDSIAFSLGLATTLALL 178
AGL++ LSPC L ++P L Y+ ++R I+ SI F G T L
Sbjct: 12 AGLLSFLSPCVLPLVPPYLTYLAGVSMEDLEIETRSRARRDILLSSILFVFGFTTVFVAL 71
Query: 179 GVGAS-FAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
G AS F G + L A G+ I+MGL+ + ++++ L + RA
Sbjct: 72 GATASAFGGVLRANLHI-LSWVAGGIIILMGLHFIGLLKVSL----LYREKRAEITKPIG 126
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
+Y+ GL FA +PC P+LA +L T + +G LL +Y+ G P + A
Sbjct: 127 LFGSYVMGLAFAFGWTPCIGPILAAILAVAGTQETVALGAALLATYSLGLGLPFIGAGLA 186
Query: 298 AGALQSLLS-FRKFSSWINPMSGALLL 323
G + ++ FR+ + + G LL+
Sbjct: 187 LGRFLAFVARFRRHFGKVEKIVGVLLV 213
>gi|422939948|ref|ZP_16967313.1| cytochrome C-type biogenesis protein CcdA [Fusobacterium nucleatum
subsp. animalis ATCC 51191]
gi|339889764|gb|EGQ79004.1| cytochrome C-type biogenesis protein CcdA [Fusobacterium nucleatum
subsp. animalis ATCC 51191]
Length = 218
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 106/213 (49%), Gaps = 19/213 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAG 186
AG+ + SPC ++P+ YI +G+ ++ I ++AF LGL+ T +LG GA G
Sbjct: 14 AGVASFFSPCIFPIIPV---YISILSNGEKKS--ISKTLAFVLGLSVTYIVLGFGAGVIG 68
Query: 187 KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQA----Y 242
+ + + + + +++GL +EI++L+ F + N+ Q+ +
Sbjct: 69 DLF--LNNKVRIIGGIIVVILGLFQMEILKLK-------FLEKTKIMNYEGENQSIFSTF 119
Query: 243 LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQ 302
L GLTF+L +PC P+LA++L ++S D L+ Y G P ++ + + AL
Sbjct: 120 LLGLTFSLGWTPCVGPILASILILASSSGDTTNSIILMFIYLLGMATPFVIFSLASKALF 179
Query: 303 SLLSF-RKFSSWINPMSGALLLGGGLYTFLDRL 334
+SF +K+ I + G L++ G ++L
Sbjct: 180 KKMSFIKKYLPTIKKVGGFLIIIMGFLLIFNKL 212
>gi|260494698|ref|ZP_05814828.1| cytochrome c-type biogenesis protein ccdA [Fusobacterium sp.
3_1_33]
gi|260197860|gb|EEW95377.1| cytochrome c-type biogenesis protein ccdA [Fusobacterium sp.
3_1_33]
Length = 218
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 106/213 (49%), Gaps = 19/213 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAG 186
AG+ + SPC ++P+ YI +G+ ++ I ++AF LGL+ T +LG GA G
Sbjct: 14 AGVASFFSPCIFPIIPV---YISILSNGEKKS--ISKTLAFVLGLSVTYIVLGFGAGVIG 68
Query: 187 KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQA----Y 242
+ + + + + +++GL +EI++L+ F + N+ Q+ +
Sbjct: 69 DLF--LNNKVRIIGGIIVVILGLFQMEILKLK-------FLEKTKIMNYEGENQSIFSTF 119
Query: 243 LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQ 302
L GLTF+L +PC P+LA++L ++S D L+ Y G P ++ + + AL
Sbjct: 120 LLGLTFSLGWTPCVGPILASILILASSSGDTTNSIMLMFIYLLGMATPFVIFSLASKALF 179
Query: 303 SLLSF-RKFSSWINPMSGALLLGGGLYTFLDRL 334
+SF +K+ I + G L++ G ++L
Sbjct: 180 KKMSFIKKYLPTIKKVGGFLIIIMGFLLIFNKL 212
>gi|449886146|ref|ZP_21786026.1| putative cytochrome C biogenesis protein [Streptococcus mutans
SA41]
gi|449254792|gb|EMC52690.1| putative cytochrome C biogenesis protein [Streptococcus mutans
SA41]
Length = 236
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-------SIAFS 168
L ++ +F GL++ SPC L +LP+ +G + G K +II D + F
Sbjct: 3 LQHITILTLFIEGLLSFFSPCVLPILPVYIGILAGQGEEKQSGEIIWDRRKVFTNTFLFI 62
Query: 169 LGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
G+A T +L +S + L L ++MGL + +I+ S F N +
Sbjct: 63 SGIAATFFILAFASSLISQFLQSHIQFLQNLGGILILIMGLVQVGLIK----SHFFNREY 118
Query: 229 RAAAANFPSSVQ-----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSY 283
A + + + A+L G TF+ + +PC P+LA++ Y +T + + L+L Y
Sbjct: 119 SAKNKVYQAGQKVTPLIAFLMGFTFSFSWTPCIGPILASVFLYASTHQG-IYSVLLILIY 177
Query: 284 TTGYVAPLLLAASFAGALQSLLSFRK 309
G+V P L A F+ + S+ +K
Sbjct: 178 CLGFVIPFALIALFSQRVMSVFKKQK 203
>gi|424048147|ref|ZP_17785702.1| disulfide interchange protein DsbD [Vibrio cholerae HENC-03]
gi|408883114|gb|EKM21905.1| disulfide interchange protein DsbD [Vibrio cholerae HENC-03]
Length = 611
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 104/226 (46%), Gaps = 25/226 (11%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGK-SRAQIIGDSIAFSLGLATTLALLGVGASF 184
G GL + +PC L + P+ + GSGK S+ + +G S + G+A T LLG+ +
Sbjct: 218 GVGL--AFTPCVLPMYPILTSIV--LGSGKLSQRRALGLSFVYVQGMALTYTLLGLVVAS 273
Query: 185 AGKAYGQIGTGLPLAASGLAIV---MGLNLLEIIELQLPS----FFDNFDPRAAAANFPS 237
AG + Q P GL+++ + L++ + LQLPS + +N + S
Sbjct: 274 AGMQF-QAAMQHPYVLIGLSVLFVTLALSMFGVYNLQLPSGVQTWLNNLSNKQQGG---S 329
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
S + G L SPC+T L+ L YVA S D L GG L + G PL+L A F
Sbjct: 330 SAGVFAMGAISGLVCSPCTTAPLSGALLYVAQSGDLLTGGIALYALAMGMGIPLILVAVF 389
Query: 298 AGALQSLLSFRKFSSWINPMS---GALLLGGGLYTFLDRLFPTTMA 340
L K W++ + G +LL ++ L+R+ P A
Sbjct: 390 GNKL-----LPKAGGWMDRVKTLFGFILLAAPIF-LLERILPDMWA 429
>gi|384887291|ref|YP_005761802.1| cytochrome c biogenesis protein [Helicobacter pylori 52]
gi|261839121|gb|ACX98886.1| cytochrome c biogenesis protein [Helicobacter pylori 52]
Length = 239
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G + LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SFVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|163752270|ref|ZP_02159470.1| thiol:disulfide interchange protein precursor [Shewanella benthica
KT99]
gi|161327853|gb|EDP99033.1| thiol:disulfide interchange protein precursor [Shewanella benthica
KT99]
Length = 621
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
+L + FG G+ +L+PC + P+ G I G S A+ S+ + G+A T +LLG
Sbjct: 212 TLVIFFGLGIGLALTPCVFPMYPILSGIIVGQGKKLSTAKAFSLSMVYVQGMAITYSLLG 271
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAI---VMGLNLLEIIELQLPSFF----DNFDPRAAA 232
+ + AG Y Q P LAI V+ L++ + EL+LPS + + F
Sbjct: 272 LVVASAGMKY-QAALQHPAILIVLAILFFVLSLSMFGLYELKLPSKWQEKMNKFSNNQKG 330
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
N + ++ G+ L ASPC+T L+ L YVA + D L G L + G PLL
Sbjct: 331 GNV---IGVFMMGVISGLVASPCTTAPLSGALVYVAQTGDLLQGFLALYVLSMGMGLPLL 387
Query: 293 LAASFAGAL 301
+ + G L
Sbjct: 388 IIGTSGGKL 396
>gi|86750796|ref|YP_487292.1| cytochrome c biogenesis protein, transmembrane region
[Rhodopseudomonas palustris HaA2]
gi|86573824|gb|ABD08381.1| Cytochrome c biogenesis protein, transmembrane region
[Rhodopseudomonas palustris HaA2]
Length = 244
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 127 AGLVTSLSPCTLSVLP--------LTLGYIGAFGSGK-SRAQIIGDSIAFSLGLATTLAL 177
AGLV+ LSPC L ++P T+ ++ A S + S+ ++ ++ F LG +T
Sbjct: 13 AGLVSFLSPCVLPLVPPYLIYLTGATIEHVAADESQRNSKRAVMISALVFVLGFSTVFVA 72
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
LG AS G L + A + I+MGL+ L + L N R P
Sbjct: 73 LGASASLVGGLIRAWSAELAIVAGIVIILMGLHFLGLTRL-------NILMREGRLPIPK 125
Query: 238 SVQ---AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLA 294
V AY+ GL FA +PC P+LA +L A G LL Y+ G P LLA
Sbjct: 126 PVGLWGAYVMGLAFAFGWTPCIGPILAAILSVAAAEATVAKGAGLLAVYSAGLGIPFLLA 185
Query: 295 ASFAGALQSLLS-FRKFSSWINPMSGALLLGGGL 327
A L + +K + + + GAL++ G+
Sbjct: 186 ALMVEQFSGLFARMKKHLAIVERVMGALMVLTGI 219
>gi|374704643|ref|ZP_09711513.1| thiol:disulfide interchange protein precursor [Pseudomonas sp. S9]
Length = 595
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 119/250 (47%), Gaps = 27/250 (10%)
Query: 102 GQQANEAVLGQLSALS---FTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRA 158
G A+ LG+ +A S +T LA+ F AGL + +PC L +LP+ G + R
Sbjct: 155 GAAASSDTLGEATARSSWKWTDLALFFLAGLGLTFTPCVLPMLPILSGVVLRGRPSNRRG 214
Query: 159 QIIGDSIAFSLGLATTLALLGV-----GASFAGKAYGQIGTGL-PLAA--SGLAIVMGLN 210
++ S+A+ L +A A LG GAS +A Q L P A S AI M
Sbjct: 215 LVL--SLAYVLPMAACYAALGALMGLFGASLNLQAMLQSPWVLIPFALFFSLFAIAM--- 269
Query: 211 LLEIIELQLPSFF-DNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAT 269
+ E++LP+F + D +A+ S A G+ +L SPC T L LL Y+++
Sbjct: 270 -FGMFEIRLPAFIRERLDRKASQTQGGSIAGAATLGVLSSLIVSPCVTAPLTGLLLYISS 328
Query: 270 SKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGG 326
+ D L GG L + G APL+L + GAL + +W+N + G +LL
Sbjct: 329 TGDALGGGFQLFALGLGMGAPLVLIGAGGGAL-----LPRSGAWMNGVRNLFGVMLLAVS 383
Query: 327 LYTFLDRLFP 336
++ LDRL P
Sbjct: 384 IW-LLDRLLP 392
>gi|153834919|ref|ZP_01987586.1| thiol:disulfide interchange protein DsbD [Vibrio harveyi HY01]
gi|148868645|gb|EDL67729.1| thiol:disulfide interchange protein DsbD [Vibrio harveyi HY01]
Length = 611
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 104/226 (46%), Gaps = 25/226 (11%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGK-SRAQIIGDSIAFSLGLATTLALLGVGASF 184
G GL + +PC L + P+ + GSGK S+ + +G S + G+A T LLG+ +
Sbjct: 218 GVGL--AFTPCVLPMYPILTSIV--LGSGKLSQRRALGLSFVYVQGMALTYTLLGLVVAS 273
Query: 185 AGKAYGQIGTGLPLAASGLAIV---MGLNLLEIIELQLPS----FFDNFDPRAAAANFPS 237
AG + Q P GL+++ + L++ + LQLPS + +N + S
Sbjct: 274 AGMQF-QAAMQHPYVLIGLSVLFVALALSMFGVYNLQLPSGVQTWLNNLSNKQQGG---S 329
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
S + G L SPC+T L+ L YVA S D L GG L + G PL+L A F
Sbjct: 330 SAGVFAMGAISGLVCSPCTTAPLSGALLYVAQSGDLLTGGIALYALAMGMGIPLILVAVF 389
Query: 298 AGALQSLLSFRKFSSWINPMS---GALLLGGGLYTFLDRLFPTTMA 340
L K W++ + G +LL ++ L+R+ P A
Sbjct: 390 GNKL-----LPKAGGWMDRVKTLFGFILLAAPIF-LLERIMPKMWA 429
>gi|150017803|ref|YP_001310057.1| cytochrome C biogenesis transmembrane protein [Clostridium
beijerinckii NCIMB 8052]
gi|149904268|gb|ABR35101.1| cytochrome c biogenesis protein, transmembrane region [Clostridium
beijerinckii NCIMB 8052]
Length = 225
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 12/211 (5%)
Query: 123 VIFGAGLVTSLSPCTLSVLPLTLGYIGA--FGSGKSRAQIIGDSIAFSLGLATTLALLGV 180
++F G++T +SPC L ++PL + Y + KS+ + +S+ F LG LLG
Sbjct: 5 LLFLEGIITFISPCILPMIPLYISYFAGDNITNNKSKYNALVNSLGFVLGFTVIFTLLG- 63
Query: 181 GASFAGK--AYGQIGTGLPLAASGLA-IVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
S AG ++ + + + SGL IV G+N + + ++ + + F S
Sbjct: 64 --SLAGSFGSFIKTESNIINIISGLILIVFGINYIGLFKISFLERSSKINVQIKTFKFLS 121
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
S+ L G+ FA+ +PC L+ L S D L G +LL Y+ G P ++ A
Sbjct: 122 SI---LFGMIFAIGWTPCVGTFLSAALMSAVNSHDILKGTLMLLIYSIGLGIPFIICAIL 178
Query: 298 AGALQSLLSF-RKFSSWINPMSGALLLGGGL 327
+L+ + ++ IN +SG +L+ G+
Sbjct: 179 IDSLKDTFNLIKRNYKIINMLSGLILIIVGI 209
>gi|392547697|ref|ZP_10294834.1| Protein-disulfide reductase [Pseudoalteromonas rubra ATCC 29570]
Length = 250
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 86/171 (50%), Gaps = 14/171 (8%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTL 175
LS+ L + +G++TS +PC +LP+TL + + R Q + + + LG A
Sbjct: 42 LSWWLLPLALFSGVLTSFTPCVYPLLPITLATLT-----RYRTQTLAP-LQYCLGFAAIY 95
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
ALLG A+++G +G + + P G A V L L ++ +F P+ F
Sbjct: 96 ALLGGIAAWSGGLFGVVASN-PWVQVGFANV--LIYLALVNKGWLTF-----PQIPGLRF 147
Query: 236 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTG 286
+ L G+T AL A+PC++PVL LL +VATS L G LL S+ G
Sbjct: 148 QGTQGPLLMGMTSALVAAPCTSPVLGGLLLFVATSGQLLFGALLLFSFALG 198
>gi|167771012|ref|ZP_02443065.1| hypothetical protein ANACOL_02366 [Anaerotruncus colihominis DSM
17241]
gi|167666682|gb|EDS10812.1| cytochrome C biogenesis protein transmembrane region [Anaerotruncus
colihominis DSM 17241]
Length = 698
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 35/232 (15%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS-------RAQIIGDSIAFSLGLA 172
S A++F GL++ SPC + ++P+ + Y+ R +++ ++ F LG++
Sbjct: 11 SFALVFIEGLLSFFSPCVIPLIPIYVSYLAGSADRDEAGAPVYHRGRVMLHTVFFILGVS 70
Query: 173 TTLALLG-----VGASFAGKA--YGQIGTGLPLAASGLAIVMGLNLLEIIELQLP----- 220
LLG +G F+G + +IG G+ I++ L L++I +LP
Sbjct: 71 FAFFLLGLSFTAIGTFFSGHKTLFARIG--------GVVIIL-LGLVQIGFFELPFLQRE 121
Query: 221 -SFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTL 279
F N + + V A++ G TF+ A +PC P L+++L + +K G L
Sbjct: 122 RRFHLNMKGKRM-----NPVVAFVMGFTFSFAWTPCVGPALSSVLILASGAKSAATGNLL 176
Query: 280 LLSYTTGYVAPLLLAASF-AGALQSLLSFRKFSSWINPMSGALLLGGGLYTF 330
+L Y G+V P L F AL L S +K + GALL+ G+ TF
Sbjct: 177 VLLYAAGFVLPFLALGLFTTQALNFLRSHKKLMRYTIKTGGALLILIGVMTF 228
>gi|323498767|ref|ZP_08103753.1| thiol:disulfide interchange protein precursor [Vibrio sinaloensis
DSM 21326]
gi|323316129|gb|EGA69154.1| thiol:disulfide interchange protein precursor [Vibrio sinaloensis
DSM 21326]
Length = 602
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 115/248 (46%), Gaps = 23/248 (9%)
Query: 104 QANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGK-SRAQIIG 162
++ E+ L + S+ + + G+ + +PC L + P+ + GSGK S+ + +G
Sbjct: 183 RSQESTLASKLSDSWWTPLLFLALGVGLAFTPCVLPMYPILTSIV--LGSGKLSQRRALG 240
Query: 163 DSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIV---MGLNLLEIIELQL 219
+ + G+A T LLG+ + AG + Q P GL+I+ + L++ + LQL
Sbjct: 241 LAFIYVQGMALTYTLLGLVVASAGMQF-QAAMQHPYVLIGLSILFVTLALSMFGVYTLQL 299
Query: 220 PS----FFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLI 275
PS + +N + + SS + G L SPC+T L+ L YVA S D L
Sbjct: 300 PSGVQTWLNNLSNKQQSG---SSAGVFAMGAISGLVCSPCTTAPLSGALLYVAQSGDLLT 356
Query: 276 GGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLYTFLD 332
GG L + G PL+L A F L K +W++ + G +LL ++ L+
Sbjct: 357 GGIALYALAIGMGIPLMLVAVFGNKL-----LPKAGNWMDRVKTLFGFILLAAPIF-LLE 410
Query: 333 RLFPTTMA 340
R+ P A
Sbjct: 411 RILPEMWA 418
>gi|153840570|ref|ZP_01993237.1| thiol:disulfide interchange protein DsbD, partial [Vibrio
parahaemolyticus AQ3810]
gi|149745767|gb|EDM56897.1| thiol:disulfide interchange protein DsbD [Vibrio parahaemolyticus
AQ3810]
Length = 403
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 25/222 (11%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGK-SRAQIIGDSIAFSLGLATTLALLGVGASF 184
G GL + +PC L + P+ + GSGK S+ + +G S+ + G+A T LLG+ +
Sbjct: 11 GVGL--AFTPCVLPMYPILTSIV--LGSGKLSQRRALGLSLVYVQGMALTYTLLGLVVAS 66
Query: 185 AGKAYGQIGTGLPLAASGLAIV---MGLNLLEIIELQLPS----FFDNFDPRAAAANFPS 237
AG + Q P GL+I+ + L++ + LQLPS + +N + S
Sbjct: 67 AGMQF-QAAMQHPYVLIGLSILFVTLALSMFGVYTLQLPSSVQTWLNNLSNKQQGG---S 122
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
S + G L SPC+T L+ L YVA S D L GG L + G PL+L A F
Sbjct: 123 SAGVFAMGAISGLVCSPCTTAPLSGALLYVAQSGDLLTGGIALYALAMGMGIPLILVAVF 182
Query: 298 AGALQSLLSFRKFSSWINPMS---GALLLGGGLYTFLDRLFP 336
L K W++ + G +LL ++ L+R+ P
Sbjct: 183 GNKL-----LPKAGGWMDRVKTLFGFILLAAPIF-LLERILP 218
>gi|91774384|ref|YP_544140.1| protein-disulfide reductase [Methylobacillus flagellatus KT]
gi|91708371|gb|ABE48299.1| Protein-disulfide reductase [Methylobacillus flagellatus KT]
Length = 623
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 93/182 (51%), Gaps = 8/182 (4%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSG-KSRAQIIGDSIAFSLGLATTLALLGVGAS 183
FG GL+ SL+PC L ++P+ G I GS K R S+A++LG+A + GV A
Sbjct: 211 FGFGLLLSLTPCVLPMIPILSGII--VGSQRKHRLYAFWLSLAYTLGMALSYTAAGVAAG 268
Query: 184 FAGKAY-GQIGTGLPLAASGLA-IVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSS--V 239
+G+ + L AS L I++ L++ + EL+LP+ ++ A+ P +
Sbjct: 269 LSGQLLSATLQNAWVLGASALVFILLALSMFGLYELKLPAMLEH-RLVNASNRLPGGHLI 327
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
+ G+ AL SPC LA L YV ++D +G T L + + G PLLL + AG
Sbjct: 328 GVFAMGVLSALIVSPCVAAPLAGALLYVGQTQDVALGATALFALSMGMGMPLLLVGASAG 387
Query: 300 AL 301
A+
Sbjct: 388 AV 389
>gi|402829055|ref|ZP_10877936.1| cytochrome C biogenesis protein transmembrane region [Slackia sp.
CM382]
gi|402284809|gb|EJU33302.1| cytochrome C biogenesis protein transmembrane region [Slackia sp.
CM382]
Length = 410
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIG-----DSIAFSLGLATTLALLG 179
F AGL++ SPC L +LP+ YIG S + ++ G ++AF LG++ T +LG
Sbjct: 10 FVAGLLSFFSPCILPLLPV---YIGLLTSDANDQELGGVQRATRTVAFVLGISATFLVLG 66
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAI-VMGLNLLEIIELQLPSFFDNFDPRAAAANFPSS 238
+GA G A + G A G+ I + GL+L +I++ L FD + N +
Sbjct: 67 LGAGAVGHA---LSNGYVAIACGVVIFIFGLHLSGLIQIPLLQREKRFD--TSKLNVRTV 121
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFA 298
A+L GL F+ +PC P+L ++L A G L L Y+ G P L+ +
Sbjct: 122 AGAFLLGLGFSFGWTPCIGPILGSVLALAAQQGTAAAGAALTLVYSLGMSIPFLIITLAS 181
Query: 299 GAL-QSLLSFRKFSSWINPMSGALLLGGGLY 328
AL + S ++ I + GAL+ GL+
Sbjct: 182 NALIGRVRSLNRYLPTIQRIGGALIAIMGLW 212
>gi|350529605|ref|ZP_08908546.1| thiol:disulfide interchange protein precursor [Vibrio rotiferianus
DAT722]
Length = 611
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 104/226 (46%), Gaps = 25/226 (11%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGK-SRAQIIGDSIAFSLGLATTLALLGVGASF 184
G GL + +PC L + P+ + GSGK S+ + +G S + G+A T LLG+ +
Sbjct: 218 GVGL--AFTPCVLPMYPILTSIV--LGSGKLSQRRALGLSFVYVQGMALTYTLLGLVVAS 273
Query: 185 AGKAYGQIGTGLPLAASGLAIV---MGLNLLEIIELQLPS----FFDNFDPRAAAANFPS 237
AG + Q P GL+++ + L++ + LQLPS + +N + S
Sbjct: 274 AGMQF-QAAMQHPYVLIGLSVLFVALALSMFGVYNLQLPSSVQTWLNNLSNKQQGG---S 329
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
S + G L SPC+T L+ L YVA S D L GG L + G PL+L A F
Sbjct: 330 SAGVFAMGAISGLVCSPCTTAPLSGALLYVAQSGDLLTGGIALYALAMGMGIPLILVAVF 389
Query: 298 AGALQSLLSFRKFSSWINPMS---GALLLGGGLYTFLDRLFPTTMA 340
L K W++ + G +LL ++ L+R+ P A
Sbjct: 390 GNKL-----LPKAGGWMDRVKTLFGFVLLAAPIF-LLERIMPEVWA 429
>gi|288561572|ref|YP_003428978.1| cytochrome c-type biogenesis protein CcdA [Bacillus pseudofirmus
OF4]
gi|288548204|gb|ADC52086.1| cytochrome c-type biogenesis protein CcdA [Bacillus pseudofirmus
OF4]
Length = 236
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 17/218 (7%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIG--AFGSGKSRAQIIG-----DSIAFSLGLATTLAL 177
FGAG+++ +SPC L + P L YI K + + + + F LG +T +
Sbjct: 10 FGAGVLSFISPCNLPLYPAFLSYITGMTMDEIKKKGRFLPPRAMLHTFIFILGFSTIFVV 69
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
LG+ + G + Q + + I+ GL L +I P F + + + PS
Sbjct: 70 LGMSTTLVGDLFLQYNNLIRQLGAIFIILFGLVTLGVIR---PPFLMK-NHQFQFSKKPS 125
Query: 238 S-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
V Y+ G+ FA +PC P+LA+++ T +P G + +Y+ G+ P +
Sbjct: 126 GYVGTYVIGIAFATGWTPCIGPILASVIALSMT--NPGSGMLYMSAYSIGFAIPFFMMTF 183
Query: 297 FAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
F G + + +K+++ I + G L++ G++ + D L
Sbjct: 184 FIGRMNWI---KKYTNLIMKLGGILMIIFGVFLYFDWL 218
>gi|163746410|ref|ZP_02153768.1| cytochrome c-type biogenesis protein CcdA [Oceanibulbus indolifex
HEL-45]
gi|161380295|gb|EDQ04706.1| cytochrome c-type biogenesis protein CcdA [Oceanibulbus indolifex
HEL-45]
Length = 250
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 88/187 (47%), Gaps = 11/187 (5%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG------SGKSRAQIIGDSIAFSLGLATTLALLGV 180
AG+ + LSPC L ++P L Y+G G +R + + ++ F LGL+T LLG
Sbjct: 21 AGIFSFLSPCVLPIVPPYLAYMGGVSINDMSSHGTARRRAVVAALFFVLGLSTVFILLGF 80
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
AS G + Q + + IV GL+ + + + F D A SS
Sbjct: 81 TASAFGMFFLQNQALFAKISGVVIIVFGLHFVGLFRI---PFLDQEARLDAGDKGGSSFG 137
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPLLLAASFAG 299
AY+ GL FA +PC P L +L +A S+ + GTLLL Y G P LLAA F
Sbjct: 138 AYVLGLAFAFGWTPCIGPQLGAILS-LAASEASVSRGTLLLGVYAAGLGIPFLLAAMFIT 196
Query: 300 ALQSLLS 306
+L++
Sbjct: 197 RAMTLMN 203
>gi|326390463|ref|ZP_08212020.1| cytochrome c biogenesis protein transmembrane region
[Thermoanaerobacter ethanolicus JW 200]
gi|325993431|gb|EGD51866.1| cytochrome c biogenesis protein transmembrane region
[Thermoanaerobacter ethanolicus JW 200]
Length = 218
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASF 184
F AG+V+ LSPC L ++P + YI FG+ K+ + + F LG + L+G AS
Sbjct: 7 FLAGIVSFLSPCVLPLIPAYVSYI--FGNKKNN---LINLFLFVLGFSIVFVLMGATASQ 61
Query: 185 AGK---AYGQIGTGLPLAASGLAIVM-GLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
GK AY I SG+ IV+ GL + I P F + N
Sbjct: 62 LGKLFLAYKDIFR----KVSGIIIVLFGLQMTGIFR---PLFLNK---EGKLINMEKVQT 111
Query: 241 AYLA----GLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
Y+ G+TFA +PC P+LA++L Y +G LL +Y+ G P ++ A
Sbjct: 112 GYIGSLVLGITFAAGWTPCVGPILASILLYAGAVSTLSVGVILLFAYSMGLGIPFIVTAL 171
Query: 297 FAGALQSLLS-FRKFSSWINPMSGALLLGGGLYTFLDRL 334
+S+ K +I +SG +L+ G+ + + L
Sbjct: 172 LIDKFKSMYKRINKILPYIEVISGVILIIFGVLLYFNML 210
>gi|156972524|ref|YP_001443431.1| thiol:disulfide interchange protein [Vibrio harveyi ATCC BAA-1116]
gi|156524118|gb|ABU69204.1| hypothetical protein VIBHAR_00156 [Vibrio harveyi ATCC BAA-1116]
Length = 592
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 104/226 (46%), Gaps = 25/226 (11%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGK-SRAQIIGDSIAFSLGLATTLALLGVGASF 184
G GL + +PC L + P+ + GSGK S+ + +G S + G+A T LLG+ +
Sbjct: 199 GVGL--AFTPCVLPMYPILTSIV--LGSGKLSQRRALGLSFVYVQGMALTYTLLGLVVAS 254
Query: 185 AGKAYGQIGTGLPLAASGLAIV---MGLNLLEIIELQLPS----FFDNFDPRAAAANFPS 237
AG + Q P GL+++ + L++ + LQLPS + +N + S
Sbjct: 255 AGMQF-QAAMQHPYVLIGLSVLFVALALSMFGVYNLQLPSGVQTWLNNLSNKQQGG---S 310
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
S + G L SPC+T L+ L YVA S D L GG L + G PL+L A F
Sbjct: 311 SAGVFAMGAISGLVCSPCTTAPLSGALLYVAQSGDLLTGGIALYALAMGMGIPLILVAVF 370
Query: 298 AGALQSLLSFRKFSSWINPMS---GALLLGGGLYTFLDRLFPTTMA 340
L K W++ + G +LL ++ L+R+ P A
Sbjct: 371 GNKL-----LPKAGGWMDRVKTLFGFILLAAPIF-LLERIMPEMWA 410
>gi|420408264|ref|ZP_14907423.1| cytochrome c biogenesis protein [Helicobacter pylori NQ4216]
gi|393025749|gb|EJB26855.1| cytochrome c biogenesis protein [Helicobacter pylori NQ4216]
Length = 239
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP--RAAAANFPSS 238
G S A + + A G+ I+ GL+ L + SF A+ +N
Sbjct: 79 GMSMAKLIHSFSFAWVNYIAGGIVILFGLHFLGVFRF---SFLYKTQSVGLASKSNSMQR 135
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SF 297
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 136 FYPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLILMVVFVMGLAIPFLLVALML 193
Query: 298 AGALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 194 ERALLFLKSLKKYNRAIEIISGLVLILMGI 223
>gi|410452968|ref|ZP_11306930.1| cytochrome c biogenesis protein transmembrane protein [Bacillus
bataviensis LMG 21833]
gi|409933713|gb|EKN70633.1| cytochrome c biogenesis protein transmembrane protein [Bacillus
bataviensis LMG 21833]
Length = 235
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 101/219 (46%), Gaps = 21/219 (9%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQ-------IIGDSIAFSLGLATTLALL 178
GAG ++ +SPC L + P L YI G+ +++ + ++ F +G + +
Sbjct: 11 GAGFLSFISPCCLPLYPAFLSYITGMSVGELKSENAMLQKRSLLHTLFFLIGFSIIFVAI 70
Query: 179 GVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSS 238
G G +F G + + + + I+ GL ++ I + P F D + N PS
Sbjct: 71 GFGTTFIGSFFREYKDLIRQLGAIFIILFGLMIVGIFK---PEFLMK-DRKFEFKNRPSG 126
Query: 239 -VQAYLAGLTFALAASPCSTPVLATLLGYVAT--SKDPLIGGTLLLSYTTGYVAPLLLAA 295
+ + L G+ FA +PC+ P+ LG+V T ++P G +++Y+ G+ P + +
Sbjct: 127 YIGSILIGMAFAAGWTPCTGPI----LGFVITLAGQNPSSGVLYMVAYSLGFAIPFFILS 182
Query: 296 SFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
F G + + +K S I + G +++ G F D +
Sbjct: 183 FFVGRMNWI---KKHSVKIMKVGGYIMIVMGFVLFFDWM 218
>gi|323488967|ref|ZP_08094204.1| cytochrome c biogenesis protein transmembrane region [Planococcus
donghaensis MPA1U2]
gi|323397359|gb|EGA90168.1| cytochrome c biogenesis protein transmembrane region [Planococcus
donghaensis MPA1U2]
Length = 236
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 103/227 (45%), Gaps = 25/227 (11%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-----------SIAFS 168
+L + FGAG ++ +SPCTL + P L YI +G + +I D ++ F
Sbjct: 6 NLFLAFGAGFLSFISPCTLPLYPAFLSYI----TGMTMDEIKNDKKVMQRRGMFHTLFFL 61
Query: 169 LGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
LG +T LG SF + + + + + ++ GL ++ + P F D
Sbjct: 62 LGFSTIFIALGFSTSFFNEWFIRYDELIRQVGAIFIVLFGLMIIGVFS---PKFLMQ-DR 117
Query: 229 RAAAANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGY 287
+ + N PS + ++ GL FA +PC+ P+ A + Y + +P G +++Y G+
Sbjct: 118 KFSFKNRPSGFLGTFVIGLAFAAGWTPCTGPITAAI--YALAATNPGSGMWYMVAYILGF 175
Query: 288 VAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
P + + F + L RK + I + G +++ G+ F D L
Sbjct: 176 AIPFFVLSFFVTRMGWL---RKHNQTIMKVGGYVMIAIGILLFFDGL 219
>gi|420436822|ref|ZP_14935814.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-28]
gi|393054562|gb|EJB55490.1| cytochrome c biogenesis protein [Helicobacter pylori Hp H-28]
Length = 239
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYISYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP--RAAAANFPSS 238
G S A + + + A G+ I+ GL+ L + SF A+ +N
Sbjct: 79 GMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRF---SFLYKTQSVGLASKSNSMQR 135
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SF 297
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 136 FYPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLMLMVVFVMGLAIPFLLVALML 193
Query: 298 AGALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 194 ERALLFLKSLKKYNRAIEIISGLVLVLMGI 223
>gi|443473888|ref|ZP_21063909.1| Cytochrome c-type biogenesis protein CcdA (DsbD-like protein)
[Pseudomonas pseudoalcaligenes KF707]
gi|442904823|gb|ELS29738.1| Cytochrome c-type biogenesis protein CcdA (DsbD-like protein)
[Pseudomonas pseudoalcaligenes KF707]
Length = 247
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 107/220 (48%), Gaps = 26/220 (11%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS------------RAQIIGDSIAFSLGLA 172
F AG+++ LSPC VLPL GY+ +F +G+S R +IG S++F LG +
Sbjct: 12 FVAGMISFLSPC---VLPLVPGYM-SFMAGRSMDELEVRKDNRERLAVIGMSLSFVLGFS 67
Query: 173 TTLALLGVGASFAGK---AYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR 229
T LG GA+ + AY Q L + IV GL + +I + + F +
Sbjct: 68 TVFIALGAGATAISQLLIAYRQETN---LIGGLIVIVFGLFMTGLINPRWLNMDVRFVHQ 124
Query: 230 AAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYV 288
+ P + AY+ G+ FA +PC P+L ++L A++ G LLS Y+ G
Sbjct: 125 LKTSGGP--LAAYVLGIAFAFGWTPCIGPILGSILTLSASTGTTGANGVTLLSIYSFGLG 182
Query: 289 APLLLAASFAGA-LQSLLSFRKFSSWINPMSGALLLGGGL 327
P LL A F L + FR++S I+ +G +L+ GL
Sbjct: 183 LPFLLTALFTNHFLAGMKRFRRWSRGIHVGAGIVLILMGL 222
>gi|414157048|ref|ZP_11413348.1| hypothetical protein HMPREF9186_01768 [Streptococcus sp. F0442]
gi|410868364|gb|EKS16329.1| hypothetical protein HMPREF9186_01768 [Streptococcus sp. F0442]
Length = 236
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 106/223 (47%), Gaps = 17/223 (7%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGY---------IGAFGSGKSRAQIIGDSIAFSLGLATT 174
+F AG+++ SPC L ++P+ +G + FG S ++ ++ F GL+T
Sbjct: 11 VFLAGVLSFFSPCILPLMPVYVGILLDSERVKTVRIFGRDISWYGLV-KTLCFIAGLSTV 69
Query: 175 LALLGVGASFAGKA-YGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAA 233
+LG GA G+ Y Q L G+ I++G++ + +I LQ + +
Sbjct: 70 FLILGYGAGALGQVLYAQWFRYL---LGGIVILLGIHQMGLINLQQLQKQRSIQLKKDE- 125
Query: 234 NFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKD-PLIGGTLLLSYTTGYVAP-L 291
N A+L G+TF+ +PC PVL+++L A+ D L G L+L YT G P L
Sbjct: 126 NRNEVFNAFLIGVTFSFGWTPCVGPVLSSVLAIAASGGDGALQGALLMLVYTLGLALPFL 185
Query: 292 LLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
+LA + + LQ + + + GAL++ G+ L L
Sbjct: 186 VLALASSWVLQHFAKLKPHMGTLKKIGGALIILMGILLMLGNL 228
>gi|159906080|ref|YP_001549742.1| cytochrome c biogenesis transmembrane protein [Methanococcus
maripaludis C6]
gi|159887573|gb|ABX02510.1| cytochrome c biogenesis protein transmembrane region [Methanococcus
maripaludis C6]
Length = 217
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 89/185 (48%), Gaps = 14/185 (7%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
L +IF AG+ T+L PC ++VLP L Y FG SR + S +F +G + + LG
Sbjct: 2 DLFLIFLAGITTALGPCIVTVLPFVLAY--TFGISNSRFEGFLVSFSFMVGFSIVFSTLG 59
Query: 180 VGASFAGKAYGQIG--TGLPLAASGLAIVMGLNLL--EIIELQLPSFFDNFDPRAAAAN- 234
V +S A+G T L A AI+ G+ +L + + F F + N
Sbjct: 60 VLSS----AFGIFLNLTLLKYIAGSFAILFGILVLFNKNFTFRDEGIFQKFSKKLVNMND 115
Query: 235 FPSSVQAYLA---GLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPL 291
P ++ + G+ + A+ C+ P+LA +L +VA+ D G LL Y+ GY P+
Sbjct: 116 IPIHIKVLNSIALGIVYGFGANICADPILAGILTFVASKADVYFGFFALLIYSLGYGLPI 175
Query: 292 LLAAS 296
+ ++
Sbjct: 176 IFLST 180
>gi|388599143|ref|ZP_10157539.1| thiol:disulfide interchange protein precursor [Vibrio campbellii
DS40M4]
Length = 611
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 104/226 (46%), Gaps = 25/226 (11%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGK-SRAQIIGDSIAFSLGLATTLALLGVGASF 184
G GL + +PC L + P+ + GSGK S+ + +G S + G+A T LLG+ +
Sbjct: 218 GVGL--AFTPCVLPMYPILTSIV--LGSGKLSQRRALGLSFVYVQGMALTYTLLGLVVAS 273
Query: 185 AGKAYGQIGTGLPLAASGLAIV---MGLNLLEIIELQLPS----FFDNFDPRAAAANFPS 237
AG + Q P GL+++ + L++ + LQLPS + +N + S
Sbjct: 274 AGMQF-QAAMQHPYVLIGLSVLFVALALSMFGVYNLQLPSGVQTWLNNLSNKQQGG---S 329
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
S + G L SPC+T L+ L YVA S D L GG L + G PL+L A F
Sbjct: 330 SAGVFAMGAISGLVCSPCTTAPLSGALLYVAQSGDLLTGGIALYALAMGMGIPLILVAVF 389
Query: 298 AGALQSLLSFRKFSSWINPMS---GALLLGGGLYTFLDRLFPTTMA 340
L K W++ + G +LL ++ L+R+ P A
Sbjct: 390 GNKL-----LPKAGGWMDRVKTLFGFILLAAPIF-LLERIMPEMWA 429
>gi|109947116|ref|YP_664344.1| cytochrome c-type biogenesis protein ccdA [Helicobacter acinonychis
str. Sheeba]
gi|109714337|emb|CAJ99345.1| cytochrome c-type biogenesis protein ccdA [Helicobacter acinonychis
str. Sheeba]
Length = 239
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGK-SRAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAERVSVFLKSLMFVIGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G S A + + A G+ I+ GL+ L + + R + +N
Sbjct: 79 GMSMAKLIHSFSFAWVNYIAGGIVILFGLHFLGVFRFAF--LYKTQSVRLTSKSNGMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC PV +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPVFTSIV-IMSASKDAY-GLMLMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRIIEIISGLVLILMGV 223
>gi|406932504|gb|EKD67467.1| hypothetical protein ACD_48C00389G0002 [uncultured bacterium]
Length = 252
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS-------------RAQIIGDSIAFSLG 170
IF AGL+T +PCTL ++P GY+G F SG S R +I+ + + + LG
Sbjct: 9 IFLAGLLTFFAPCTLPLVP---GYLG-FISGVSLADLKKGSIGILVRKKILINGLLYVLG 64
Query: 171 LATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRA 230
LLG +G + Q L L I+ GL +L++ + F D R
Sbjct: 65 FGVVFVLLGTAFGASGAVFAQYRLLLSRLGGILIILFGLFMLDLPIFKKFGFLQR-DTRF 123
Query: 231 AAANFPSS-VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVA 289
P + + ++L G TFA +PC P+L T+L A S + G LL ++ G
Sbjct: 124 HTTLKPGNPLSSFLFGATFAFGWTPCIGPILGTVLVLAANSTTAVQGAFLLSIFSIGLAV 183
Query: 290 PLLLAASFAG-ALQSLLSFRKFSSWINPMS 318
P +L A G ALQ L +K +++++ +S
Sbjct: 184 PFVLIAFGIGHALQYL---QKITTYVHIIS 210
>gi|417794779|ref|ZP_12442017.1| putative cytochrome C-type biogenesis protein CcdA [Streptococcus
oralis SK255]
gi|334267378|gb|EGL85840.1| putative cytochrome C-type biogenesis protein CcdA [Streptococcus
oralis SK255]
Length = 236
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 100/222 (45%), Gaps = 37/222 (16%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSL-----------GLA 172
+F AG+++ SPC L +LP+ Y G K+ AQ I+ SL G++
Sbjct: 10 VFLAGILSFFSPCILPLLPV---YAGVLLDDKNDAQASSGKISISLVSLVRTLAFIAGIS 66
Query: 173 TTLALLGVGASFAGK----AYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
LLG GA F G ++ Q TG + I++GL+ +E++ LQ
Sbjct: 67 FIFILLGYGAGFLGNLLYASWFQYVTG------AVIILLGLHQMEVLHLQGLYKERRLQL 120
Query: 229 RAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAT-SKDPLIGGTLLLSYTTGY 287
+ QA+L GLTF+ A +PC PVL ++L A+ G L+L YT G
Sbjct: 121 KRQGQKGNGYSQAFLLGLTFSFAWTPCVGPVLGSVLALAASGGSGAWQGAGLMLVYTLGL 180
Query: 288 VAPLL---LAASFAGALQSLLSFRKFSSWINPMSGALLLGGG 326
P L LA+S+ L FRK ++P G L GG
Sbjct: 181 ALPFLVLALASSYV-----LKHFRK----LHPYLGTLKRVGG 213
>gi|325841746|ref|ZP_08167440.1| cytochrome C biogenesis protein transmembrane region [Turicibacter
sp. HGF1]
gi|325489865|gb|EGC92216.1| cytochrome C biogenesis protein transmembrane region [Turicibacter
sp. HGF1]
Length = 380
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKS---RAQIIGDSIAFSLGLATTLAL 177
+ ++ G+++ SPC + +LP+ LG + S + ++ + ++IAF LG++TT L
Sbjct: 6 IIIVLIEGILSFFSPCIIPLLPIYLGILSISDSEEKLFHKSGLFKNTIAFVLGISTTFIL 65
Query: 178 LGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPS 237
LG+ + + L + ++MGL + + L++P F N + R
Sbjct: 66 LGLSFQSLSSLLAKYQNTITLVGGIIIVIMGLFYMGV--LKIP--FLNQEKRMHIQTKRM 121
Query: 238 SV-QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAAS 296
++ YL G TF+ +PC P+LA++L T L++ YT G++ P ++ A
Sbjct: 122 NILSTYLLGFTFSFGWTPCIGPMLASVLMMSITQ-----SFVLIVVYTMGFIIPFMIVAL 176
Query: 297 FAGALQSLLSFRKFSSWINPMSGALLLGGGL 327
F L L++ K + M L+GG +
Sbjct: 177 FYNRLLHFLTWIKCN-----MDKIKLVGGAV 202
>gi|269962475|ref|ZP_06176824.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832771|gb|EEZ86881.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 610
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 104/226 (46%), Gaps = 25/226 (11%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGK-SRAQIIGDSIAFSLGLATTLALLGVGASF 184
G GL + +PC L + P+ + GSGK S+ + +G S + G+A T LLG+ +
Sbjct: 217 GVGL--AFTPCVLPMYPILTSIV--LGSGKLSQRRALGLSFVYVQGMALTYTLLGLVVAS 272
Query: 185 AGKAYGQIGTGLPLAASGLAIV---MGLNLLEIIELQLPS----FFDNFDPRAAAANFPS 237
AG + Q P GL+++ + L++ + LQLPS + +N + S
Sbjct: 273 AGMQF-QAAMQHPYVLIGLSVLFVTLALSMFGVYNLQLPSGMQTWLNNLSNKQQGG---S 328
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
S + G L SPC+T L+ L YVA S D L GG L + G PL+L A F
Sbjct: 329 SAGVFAMGAISGLVCSPCTTAPLSGALLYVAQSGDLLTGGIALYALAMGMGIPLILVAVF 388
Query: 298 AGALQSLLSFRKFSSWINPMS---GALLLGGGLYTFLDRLFPTTMA 340
L K W++ + G +LL ++ L+R+ P A
Sbjct: 389 GNKL-----LPKAGGWMDRVKTLFGFILLAAPIF-LLERIMPEMWA 428
>gi|442805729|ref|YP_007373878.1| cytochrome c-type biogenesis protein CcdA [Clostridium stercorarium
subsp. stercorarium DSM 8532]
gi|442741579|gb|AGC69268.1| cytochrome c-type biogenesis protein CcdA [Clostridium stercorarium
subsp. stercorarium DSM 8532]
Length = 223
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 4/200 (2%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASF 184
F G++T +SPC L +LP+ + Y S R + + +++ F +G ++G A
Sbjct: 7 FLEGIITFISPCLLPMLPVYISYFAGQDSKGDRKKALINALGFVVGFTIIFIIMGALAGS 66
Query: 185 AGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLA 244
G + + L + IV GLN L ++ + L + + N P + L
Sbjct: 67 VGGFLRKNQVFVNLITGLIVIVFGLNFLGVVNIPL---LNRTRILGLSNNDPKFLHTVLF 123
Query: 245 GLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSL 304
GL F+++ +PC L + L A + L G +LL ++ G P +++A L++
Sbjct: 124 GLVFSISWTPCVGVFLGSALMLAAYGGESLKGILMLLCFSLGLGIPFVISAVLIDRLKTS 183
Query: 305 LSFRKFS-SWINPMSGALLL 323
F K + IN +SG+LL+
Sbjct: 184 FDFIKRNYRVINTLSGSLLV 203
>gi|304407075|ref|ZP_07388729.1| cytochrome c biogenesis protein transmembrane region [Paenibacillus
curdlanolyticus YK9]
gi|304344062|gb|EFM09902.1| cytochrome c biogenesis protein transmembrane region [Paenibacillus
curdlanolyticus YK9]
Length = 239
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 17/226 (7%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYI---------GAFGSGKSRAQIIGDSIAFSLGLATTL 175
F AG+ + +SPC L + P L YI + SG R + + ++ F LG +
Sbjct: 12 FAAGIASFISPCCLPLYPSYLSYITGVSVTELKSSEKSGSVRWRTMSHTLFFLLGFSVVF 71
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANF 235
LG G + + + T + ++ L I+MGL L+ + + Q R
Sbjct: 72 YTLGYGTNRFADFFSEYETLIRQLSAILIILMGLFLIGLFQPQALMKDRKLHMRLKK--- 128
Query: 236 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
PS + A++ G+ F+ SPC PVL +L A+S P + +Y G+ P A
Sbjct: 129 PSYIGAFIFGIGFSAGWSPCMGPVLTAILALAASS--PGTWFQMTTAYALGFAIPFFALA 186
Query: 296 SFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLFPTTMAM 341
F G+ + +L K+S + + G +++ G+ F DR+ T+ +
Sbjct: 187 FFVGSTRWVL---KYSDKLMKLGGFVMILMGILLFTDRMTQITIWL 229
>gi|262065907|ref|ZP_06025519.1| cytochrome c-type biogenesis protein CcdA [Fusobacterium
periodonticum ATCC 33693]
gi|291380388|gb|EFE87906.1| cytochrome c-type biogenesis protein CcdA [Fusobacterium
periodonticum ATCC 33693]
Length = 217
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 9/170 (5%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGAS 183
++ AGL++ SPC +LP+ YIG + ++ I ++ F +GL+T+ LLG GA
Sbjct: 11 VYVAGLLSFFSPCIFPLLPV---YIGMLSTSGKKSII--KTVVFVIGLSTSFVLLGFGAG 65
Query: 184 FAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYL 243
G I + + + I+ G+ +EI+++ D + + S A+L
Sbjct: 66 SIGSF--LISKTFRIISGVVVIIFGIIQMEILKIPFLERTKLVDIKGKEND--SIWGAFL 121
Query: 244 AGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLL 293
G TF+L +PC P+LA++L + +P G ++ Y G P ++
Sbjct: 122 LGFTFSLGWTPCVGPILASILFISSGGGNPYYGALMMFIYVLGLATPFVI 171
>gi|402815106|ref|ZP_10864699.1| cytochrome c-type biogenesis protein CcdA [Paenibacillus alvei DSM
29]
gi|402507477|gb|EJW17999.1| cytochrome c-type biogenesis protein CcdA [Paenibacillus alvei DSM
29]
Length = 238
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 104/224 (46%), Gaps = 18/224 (8%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGK---------SRAQIIGDSIAFSLG 170
++ + F AGLV+ +SPC L + P + I G+ R + I ++ F LG
Sbjct: 5 TVWIAFWAGLVSFISPCCLPLYPTYISIITGMSVGQLKDKQNKREVRWKTITHTLFFILG 64
Query: 171 LATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRA 230
++ LG+GA+ G + + ++ I+MGL LL + + QL +
Sbjct: 65 ISVVFYTLGLGATLIGSFLAEYRDLIRQISAIFIIIMGLVLLGVFQPQLLMKERKMNFGQ 124
Query: 231 AAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAP 290
+ F S +L G+ F+ SPC P+L ++ A+ +P G ++ +Y G+ P
Sbjct: 125 KSGYFGS----FLFGMGFSAGWSPCIGPILTAIISLSAS--EPSTGLLMITAYCIGFGLP 178
Query: 291 LLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
+ + F G+ + L K+S + + GA+++ G+ F D L
Sbjct: 179 FFILSFFIGSTRWL---TKYSGVMMKIGGAIMIVMGVLLFTDHL 219
>gi|401683113|ref|ZP_10815002.1| cytochrome C biogenesis protein transmembrane region [Streptococcus
sp. AS14]
gi|400183795|gb|EJO18046.1| cytochrome C biogenesis protein transmembrane region [Streptococcus
sp. AS14]
Length = 235
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 111/239 (46%), Gaps = 32/239 (13%)
Query: 114 SALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRA--QIIGDSIA----- 166
S L F S +F AG+++ SPC +LP+ YIG K ++ G +A
Sbjct: 3 SPLFFVS---VFLAGILSFFSPCIFPLLPV---YIGILLDDKEVKTLKVFGRELAWQGMV 56
Query: 167 ----FSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEII---ELQL 219
F G++T LLG GA F G L GL I++GL+ +E+I +LQ+
Sbjct: 57 RTLFFIAGISTVFFLLGFGAGFLGTII--YSPTLRYVMGGLIILLGLHQMELINIRQLQI 114
Query: 220 PSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTL 279
F +F S A+L G+TF+ +PC P+L+++L A+ + G +
Sbjct: 115 QKSL-TFKKNGQKHHFWS---AFLLGITFSFGWTPCIGPILSSVLALAASGGNGAFQGAI 170
Query: 280 L-LSYTTGYVAPLL---LAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
L L YT G P L LA+SF +Q + + + + GAL++ G+ L +L
Sbjct: 171 LTLIYTLGMALPFLILALASSF--VMQYFNKIKPYMGLMKKIGGALIILMGILLMLGQL 227
>gi|419779719|ref|ZP_14305585.1| cytochrome C biogenesis protein transmembrane region [Streptococcus
oralis SK100]
gi|383185975|gb|EIC78455.1| cytochrome C biogenesis protein transmembrane region [Streptococcus
oralis SK100]
Length = 236
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 33/210 (15%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQI-----------IGDSIAFSLGLA 172
+F AG+++ SPC L +LP+ Y G K+ AQ + ++AF G++
Sbjct: 10 VFLAGILSFFSPCILPLLPV---YAGVLLDEKNDAQASSGKFSISVVSLLRTLAFIAGIS 66
Query: 173 TTLALLGVGASFAGK----AYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
LLG GA F G ++ Q TG + I++GL+ ++++ LQ
Sbjct: 67 FVFILLGYGAGFLGNLLYASWFQYVTGATI------ILLGLHQMDVLHLQGLYKERRLQL 120
Query: 229 RAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAT-SKDPLIGGTLLLSYTTGY 287
+ N QA+L GLTF+ A +PC PVL ++L A+ G L+L YT G
Sbjct: 121 KRQGQNANGYSQAFLLGLTFSFAWTPCVGPVLGSVLALAASGGSRAWQGAGLMLVYTLGL 180
Query: 288 VAPLL---LAASFAGALQSLLSFRKFSSWI 314
P L LA+S+ L FRK ++
Sbjct: 181 ALPFLVLALASSYV-----LKHFRKLHPYL 205
>gi|386283746|ref|ZP_10060970.1| Protein-disulfide reductase [Sulfurovum sp. AR]
gi|385345289|gb|EIF52001.1| Protein-disulfide reductase [Sulfurovum sp. AR]
Length = 456
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 13/213 (6%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASF 184
F AG++ + +PC L ++P+ I G ++ + + S+++ LG A T AL+G A
Sbjct: 41 FVAGILLTFTPCVLPMVPIVSSVIAGQGENITKTKAVILSVSYVLGTAVTYALMGALAGA 100
Query: 185 AG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFD-NFDPRAAAANFPSSVQ 240
G ++Y Q + A S + +VM L++ + ++LPSF + +
Sbjct: 101 TGEQLQSYFQNIWAIS-AMSMVFVVMSLSMFGLFTIELPSFIQSKLNAESQGLKGGKLGM 159
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGA 300
+L G+ AL C +P+L + L +S DP++G + G PL+L AG
Sbjct: 160 VFLLGMISALILGACVSPILISFLSVAISSSDPVLGAMTMFFLALGMGVPLILLGVGAGY 219
Query: 301 LQSLLSFRKFSSWINPMS---GALLLGGGLYTF 330
+ K +W+ + GALLLG + F
Sbjct: 220 I-----LPKSGAWMEKVKYVFGALLLGVAIEIF 247
>gi|308126677|ref|ZP_07663857.1| thiol:disulfide interchange protein DsbD [Vibrio parahaemolyticus
AQ4037]
gi|308109549|gb|EFO47089.1| thiol:disulfide interchange protein DsbD [Vibrio parahaemolyticus
AQ4037]
Length = 573
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 25/222 (11%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGK-SRAQIIGDSIAFSLGLATTLALLGVGASF 184
G GL + +PC L + P+ + GSGK S+ + +G S+ + G+A T LLG+ +
Sbjct: 221 GVGL--AFTPCVLPMYPILTSIV--LGSGKLSQRRALGLSLVYVQGMALTYTLLGLVVAS 276
Query: 185 AGKAYGQIGTGLPLAASGLAIV---MGLNLLEIIELQLPS----FFDNFDPRAAAANFPS 237
AG + Q P GL+I+ + L++ + LQLPS + +N + S
Sbjct: 277 AGMQF-QAAMQHPYVLIGLSILFVTLALSMFGVYTLQLPSSVQTWLNNLSNKQQGG---S 332
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
S + G L SPC+T L+ L YVA S D L GG L + G PL+L A F
Sbjct: 333 SAGVFAMGAISGLVCSPCTTAPLSGALLYVAQSGDLLTGGIALYALAMGMGIPLILVAVF 392
Query: 298 AGALQSLLSFRKFSSWINPMS---GALLLGGGLYTFLDRLFP 336
L K W++ + G +LL ++ L+R+ P
Sbjct: 393 GNKL-----LPKAGGWMDRVKTLFGFILLAAPIF-LLERILP 428
>gi|417320771|ref|ZP_12107312.1| thiol:disulfide interchange protein precursor [Vibrio
parahaemolyticus 10329]
gi|328472236|gb|EGF43106.1| thiol:disulfide interchange protein precursor [Vibrio
parahaemolyticus 10329]
Length = 613
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 25/222 (11%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGK-SRAQIIGDSIAFSLGLATTLALLGVGASF 184
G GL + +PC L + P+ + GSGK S+ + +G S+ + G+A T LLG+ +
Sbjct: 221 GVGL--AFTPCVLPMYPILTSIV--LGSGKLSQRRALGLSLVYVQGMALTYTLLGLVVAS 276
Query: 185 AGKAYGQIGTGLPLAASGLAIV---MGLNLLEIIELQLPS----FFDNFDPRAAAANFPS 237
AG + Q P GL+I+ + L++ + LQLPS + +N + S
Sbjct: 277 AGMQF-QAAMQHPYVLIGLSILFVTLALSMFGVYTLQLPSSVQTWLNNLSNKQQGG---S 332
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
S + G L SPC+T L+ L YVA S D L GG L + G PL+L A F
Sbjct: 333 SAGVFAMGAISGLVCSPCTTAPLSGALLYVAQSGDLLTGGIALYALAMGMGIPLILVAVF 392
Query: 298 AGALQSLLSFRKFSSWINPMS---GALLLGGGLYTFLDRLFP 336
L K W++ + G +LL ++ L+R+ P
Sbjct: 393 GNKL-----LPKAGGWMDRVKTLFGFILLAAPIF-LLERILP 428
>gi|197121043|ref|YP_002132994.1| cytochrome C biogenesis protein transmembrane region
[Anaeromyxobacter sp. K]
gi|196170892|gb|ACG71865.1| cytochrome c biogenesis protein transmembrane region
[Anaeromyxobacter sp. K]
Length = 471
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 90/182 (49%), Gaps = 11/182 (6%)
Query: 108 AVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAF 167
A+L + S L+F AV F G+ TSL+PC ++P+T+ GA +G SR + + S +
Sbjct: 39 ALLAEGSVLAF---AVAFAGGVATSLTPCVYPLIPITVSIFGARKAG-SRGEAMAVSALY 94
Query: 168 SLGLATTLALLGVGASFAGKAYGQIGTGLPLA---ASGLAIVMGLNLLEIIELQLPSFFD 224
LG+A + LGVGA+ GKA+G + P + + M ++ ELQLP+
Sbjct: 95 VLGIAAMYSALGVGAALTGKAFGSVMQN-PWVIGFVALVLAAMAASMFGAFELQLPA--- 150
Query: 225 NFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYT 284
+ R A+ GL + A+PC+ PVLA L +VA G ++ +Y
Sbjct: 151 SMQARLNGVGGAGRAGAFAMGLVSGIIAAPCTGPVLAAALTFVAAKGSVAFGFGIMFAYA 210
Query: 285 TG 286
G
Sbjct: 211 LG 212
>gi|414158787|ref|ZP_11415079.1| hypothetical protein HMPREF9188_01353 [Streptococcus sp. F0441]
gi|410868770|gb|EKS16734.1| hypothetical protein HMPREF9188_01353 [Streptococcus sp. F0441]
Length = 236
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSL-----------GLA 172
+F AG+++ SPC L +LP+ Y G K AQ I+ SL G++
Sbjct: 10 VFLAGILSFFSPCILPLLPV---YAGILLDDKDGAQASSGKISISLVSLVRTLAFIAGIS 66
Query: 173 TTLALLGVGASFAGK----AYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
LLG GA F G ++ Q TG + I++GL+ +E++ L+
Sbjct: 67 FIFILLGYGAGFLGNLLYASWFQYVTG------AVIILLGLHQMEVLHLKGLYKEKRLQL 120
Query: 229 RAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAT-SKDPLIGGTLLLSYTTGY 287
+ N QA+L GLTF+ A +PC PVL ++L A+ G L+L YT G
Sbjct: 121 KRQGQNANGYSQAFLLGLTFSFAWTPCVGPVLGSVLALAASGGSGAWQGAGLMLVYTLGL 180
Query: 288 VAPLL---LAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFL 331
P L LA+S+ L FRK ++P G L GG L
Sbjct: 181 ALPFLVLALASSYV-----LKHFRK----LHPYLGTLKKVGGFLIIL 218
>gi|304437368|ref|ZP_07397327.1| cytochrome c biogenesis protein CcdA [Selenomonas sp. oral taxon
149 str. 67H29BP]
gi|304369624|gb|EFM23290.1| cytochrome c biogenesis protein CcdA [Selenomonas sp. oral taxon
149 str. 67H29BP]
Length = 227
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 91/199 (45%), Gaps = 8/199 (4%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGS---GKSRAQIIGDSIAFSLGLA 172
+ T L F AG+++ LSPC L +LP T I A S G+ ++ ++ AF G
Sbjct: 1 MELTLLGGAFLAGVLSFLSPCVLPLLP-TFSLILAKNSRQDGREAQRLYVNTAAFLAGFT 59
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
LLG AS G L A+ L I+MGL + I ++P + P
Sbjct: 60 VVFVLLGATASLLGAWLFSYQEILRQGAALLVILMGLFMTGWI--RIPLLLREYRP-FQR 116
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAP-L 291
F A+L G F L +PC+ PVLAT+L Y ++ G LLL Y+ G+ P
Sbjct: 117 RGFDGVGGAFLLGCGFTLGWTPCTGPVLATILLYAGSAATVGAGALLLLVYSMGFAVPFF 176
Query: 292 LLAASFAGALQSLLSFRKF 310
LLA + + L F ++
Sbjct: 177 LLAVIWRRHIMKLRGFYQY 195
>gi|157377147|ref|YP_001475747.1| thiol:disulfide interchange protein [Shewanella sediminis HAW-EB3]
gi|157319521|gb|ABV38619.1| Protein-disulfide reductase [Shewanella sediminis HAW-EB3]
Length = 611
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 106/227 (46%), Gaps = 20/227 (8%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
+L + FG G+ +L+PC + P+ G I G S A+ S+ + G+A T +LLG
Sbjct: 203 TLVIFFGLGIGLALTPCVFPMYPILSGIIVGQGEKLSTAKAFSLSMVYVQGMAITYSLLG 262
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAI---VMGLNLLEIIELQLPSFF----DNFDPRAAA 232
+ + AG Y Q P LA+ V+ L++ + EL+LPS + + F
Sbjct: 263 LVVASAGMKY-QAALQHPAVLIVLAVLFFVLSLSMFGLYELKLPSSWQEKMNRFSNNQKG 321
Query: 233 ANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLL 292
N + ++ G+ L ASPC+T L+ L YVA + D L G L + G PLL
Sbjct: 322 GNV---IGVFIMGIISGLVASPCTTAPLSGALVYVAQTGDLLQGFLALYVLSMGMGLPLL 378
Query: 293 LAASFAGALQSLLSFRKFSSWINPMS---GALLLGGGLYTFLDRLFP 336
+ + G L + SW++ + G LL+ + + R++P
Sbjct: 379 IIGTSGGKL-----LPRAGSWMDVIKTVFGFLLIAVSI-VMIGRIWP 419
>gi|389772851|ref|ZP_10192243.1| putative cytochrome c biogenesis protein [Rhodanobacter sp. 115]
gi|388429472|gb|EIL86814.1| putative cytochrome c biogenesis protein [Rhodanobacter sp. 115]
Length = 231
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 97/209 (46%), Gaps = 14/209 (6%)
Query: 107 EAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIA 166
E++ L S SL + F G V + +P L+ +P++L Y+ S + R I+ +
Sbjct: 4 ESLRATLEQASLASLGIGFLLGFVFTFNPVALASIPVSLAYVTK--SREPRTAILYGGL- 60
Query: 167 FSLGLATTLALLGVGASFAGKAYGQI---GTGLPLAASGLAIVMGLNLLEIIELQLPSFF 223
F LG+ LLG+ A F G+ + GL L + I++GL I L LPS
Sbjct: 61 FVLGMVVIQTLLGLIAGFGGQWVAHLVDRKWGLVLGPA--LILLGLMWPGWIRLPLPSI- 117
Query: 224 DNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSY 283
R A+ S A G F++A P TP L LLG A PL G TLL ++
Sbjct: 118 ---SLRGKRAS--SGWGAAALGAAFSVAVCPFCTPALVVLLGVAAGIGSPLFGATLLFAF 172
Query: 284 TTGYVAPLLLAASFAGALQSLLSFRKFSS 312
G P++L A+ G L+SL +++
Sbjct: 173 AMGRAVPVILGAAAVGWLESLAILQRYQK 201
>gi|323692304|ref|ZP_08106543.1| cytochrome c-type biogenesis protein CcdA [Clostridium symbiosum
WAL-14673]
gi|323503629|gb|EGB19452.1| cytochrome c-type biogenesis protein CcdA [Clostridium symbiosum
WAL-14673]
Length = 463
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 104/224 (46%), Gaps = 29/224 (12%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYI-GAFGS----GK---SRAQIIGDSIAFSLGLATTL 175
+F GL++ SPC L ++PL +GY+ G GS G+ R++++ ++ F +G++
Sbjct: 14 VFFQGLISFFSPCVLPLIPLYIGYLSGGTGSRGEDGRIYYKRSKVMLHTLCFVIGVSFAF 73
Query: 176 ALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEII--------ELQLPSFFDNFD 227
LLG+G S G + L ++ GL L E +LP D
Sbjct: 74 FLLGLGFSAMGGFFKNNQLMFARVGGILVVMFGLYQLGFFGSSSLLGRERRLPFKLDTL- 132
Query: 228 PRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGY 287
A + F A + G TF+ A +PC P LA++L A++ +G L+ YT G+
Sbjct: 133 ---AMSPF----TALVMGFTFSFAWTPCVGPALASVLLMAASASTQAMGFVLIGVYTAGF 185
Query: 288 VAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFL 331
V P L F SLL F F S +N + + +GG L F+
Sbjct: 186 VLPFLAVGLFT---TSLLDF--FKSHMNVVKYTVRIGGILMVFM 224
>gi|433658961|ref|YP_007276340.1| Cytochrome c-type biogenesis protein DsbD, protein-disulfide
reductase [Vibrio parahaemolyticus BB22OP]
gi|432509649|gb|AGB11166.1| Cytochrome c-type biogenesis protein DsbD, protein-disulfide
reductase [Vibrio parahaemolyticus BB22OP]
Length = 613
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 25/222 (11%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGK-SRAQIIGDSIAFSLGLATTLALLGVGASF 184
G GL + +PC L + P+ + GSGK S+ + +G S+ + G+A T LLG+ +
Sbjct: 221 GVGL--AFTPCVLPMYPILTSIV--LGSGKLSQRRALGLSLVYVQGMALTYTLLGLVVAS 276
Query: 185 AGKAYGQIGTGLPLAASGLAIV---MGLNLLEIIELQLPS----FFDNFDPRAAAANFPS 237
AG + Q P GL+I+ + L++ + LQLPS + +N + S
Sbjct: 277 AGMQF-QAAMQHPYVLIGLSILFVTLALSMFGVYTLQLPSSVQTWLNNLSNKQQGG---S 332
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
S + G L SPC+T L+ L YVA S D L GG L + G PL+L A F
Sbjct: 333 SAGVFAMGAISGLVCSPCTTAPLSGALLYVAQSGDLLTGGIALYALAMGMGIPLILVAVF 392
Query: 298 AGALQSLLSFRKFSSWINPMS---GALLLGGGLYTFLDRLFP 336
L K W++ + G +LL ++ L+R+ P
Sbjct: 393 GNKL-----LPKAGGWMDRVKTLFGFILLAAPIF-LLERILP 428
>gi|153840490|ref|ZP_01993157.1| thiol:disulfide interchange protein DsbD, partial [Vibrio
parahaemolyticus AQ3810]
gi|149745847|gb|EDM56977.1| thiol:disulfide interchange protein DsbD [Vibrio parahaemolyticus
AQ3810]
Length = 453
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 25/222 (11%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGK-SRAQIIGDSIAFSLGLATTLALLGVGASF 184
G GL + +PC L + P+ + GSGK S+ + +G S+ + G+A T LLG+ +
Sbjct: 221 GVGL--AFTPCVLPMYPILTSIV--LGSGKLSQRRALGLSLVYVQGMALTYTLLGLVVAS 276
Query: 185 AGKAYGQIGTGLPLAASGLAIV---MGLNLLEIIELQLPS----FFDNFDPRAAAANFPS 237
AG + Q P GL+I+ + L++ + LQLPS + +N + S
Sbjct: 277 AGMQF-QAAMQHPYVLIGLSILFVTLALSMFGVYTLQLPSSVQTWLNNLSNKQQGG---S 332
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
S + G L SPC+T L+ L YVA S D L GG L + G PL+L A F
Sbjct: 333 SAGVFAMGAISGLVCSPCTTAPLSGALLYVAQSGDLLTGGIALYALAMGMGIPLILVAVF 392
Query: 298 AGALQSLLSFRKFSSWINPMS---GALLLGGGLYTFLDRLFP 336
L K W++ + G +LL ++ L+R+ P
Sbjct: 393 GNKL-----LPKAGGWMDRVKTLFGFILLAAPIF-LLERILP 428
>gi|110347016|ref|YP_665834.1| cytochrome c biogenesis protein, transmembrane region
[Chelativorans sp. BNC1]
gi|110283127|gb|ABG61187.1| cytochrome c biogenesis protein, transmembrane region
[Chelativorans sp. BNC1]
Length = 245
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 11/215 (5%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYI-----GAFGSGKSRA-QIIGDSIAFSLGLATTLALLGV 180
AG ++ LSPC L ++P L Y+ G G+SR ++G ++ F LG LLG+
Sbjct: 17 AGAISFLSPCVLPLVPGYLSYVAGGVNGDCFDGRSRRFHVLGPALLFVLGFTAVFVLLGL 76
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
A G + L L V GL + + L+LP+ +
Sbjct: 77 SAMALGGFLQRYQIQANLIGGALVTVFGLAMTGL--LRLPAVLMADRRWSGPTQIGGPFG 134
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG- 299
A+L G+ FA +PC PVLA++L A S G LL +Y G P +LAA F G
Sbjct: 135 AFLLGIAFAFGWTPCIGPVLASILTVTAASSGN--GAVLLGAYGLGVGLPFVLAALFFGN 192
Query: 300 ALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
A +L R+ + +N +GA+++G G+ RL
Sbjct: 193 AAVALKRMRRAGAVLNVGAGAVMVGVGILMMTGRL 227
>gi|28899639|ref|NP_799244.1| thiol:disulfide interchange protein [Vibrio parahaemolyticus RIMD
2210633]
gi|260361512|ref|ZP_05774559.1| thiol:disulfide interchange protein DsbD [Vibrio parahaemolyticus
K5030]
gi|260879129|ref|ZP_05891484.1| thiol:disulfide interchange protein DsbD [Vibrio parahaemolyticus
AN-5034]
gi|260895484|ref|ZP_05903980.1| thiol:disulfide interchange protein DsbD [Vibrio parahaemolyticus
Peru-466]
gi|33301072|sp|Q87KW0.1|DSBD_VIBPA RecName: Full=Thiol:disulfide interchange protein DsbD; AltName:
Full=Protein-disulfide reductase; Short=Disulfide
reductase; Flags: Precursor
gi|28807891|dbj|BAC61128.1| thiol:disulfide interchange protein DsbD [Vibrio parahaemolyticus
RIMD 2210633]
gi|308088072|gb|EFO37767.1| thiol:disulfide interchange protein DsbD [Vibrio parahaemolyticus
Peru-466]
gi|308091597|gb|EFO41292.1| thiol:disulfide interchange protein DsbD [Vibrio parahaemolyticus
AN-5034]
gi|308112846|gb|EFO50386.1| thiol:disulfide interchange protein DsbD [Vibrio parahaemolyticus
K5030]
Length = 613
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 25/222 (11%)
Query: 126 GAGLVTSLSPCTLSVLPLTLGYIGAFGSGK-SRAQIIGDSIAFSLGLATTLALLGVGASF 184
G GL + +PC L + P+ + GSGK S+ + +G S+ + G+A T LLG+ +
Sbjct: 221 GVGL--AFTPCVLPMYPILTSIV--LGSGKLSQRRALGLSLVYVQGMALTYTLLGLVVAS 276
Query: 185 AGKAYGQIGTGLPLAASGLAIV---MGLNLLEIIELQLPS----FFDNFDPRAAAANFPS 237
AG + Q P GL+I+ + L++ + LQLPS + +N + S
Sbjct: 277 AGMQF-QAAMQHPYVLIGLSILFVTLALSMFGVYTLQLPSSVQTWLNNLSNKQQGG---S 332
Query: 238 SVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASF 297
S + G L SPC+T L+ L YVA S D L GG L + G PL+L A F
Sbjct: 333 SAGVFAMGAISGLVCSPCTTAPLSGALLYVAQSGDLLTGGIALYALAMGMGIPLILVAVF 392
Query: 298 AGALQSLLSFRKFSSWINPMS---GALLLGGGLYTFLDRLFP 336
L K W++ + G +LL ++ L+R+ P
Sbjct: 393 GNKL-----LPKAGGWMDRVKTLFGFILLAAPIF-LLERILP 428
>gi|420519061|ref|ZP_15017505.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp H-5b]
gi|393128153|gb|EJC28597.1| cytochrome C biogenesis transmembrane region family protein
[Helicobacter pylori Hp H-5b]
Length = 239
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFG-----SGKS-RAQIIGDSIAFSLGLATTLALLGV 180
AG++T LSPC L ++P + YI GK+ R + S+ F +G +L LGV
Sbjct: 21 AGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGF--SLVFLGV 78
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR-AAAANFPSSV 239
G A + + + A G+ I+ GL+ L + + R A+ +N
Sbjct: 79 GMPMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFSF--LYKTQSVRLASKSNSMQRF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA-SFA 298
+L G++FAL +PC P+ +++ ++ SKD G L++ + G P LL A
Sbjct: 137 YPFLLGMSFALGWTPCIGPIFTSIV-IMSASKDAY-GLILMVVFVMGLAIPFLLVALMLE 194
Query: 299 GALQSLLSFRKFSSWINPMSGALLLGGGL 327
AL L S +K++ I +SG +L+ G+
Sbjct: 195 RALLFLKSLKKYNRAIEIVSGLVLILMGI 223
>gi|315223006|ref|ZP_07864885.1| cytochrome C biogenesis protein transmembrane region [Streptococcus
anginosus F0211]
gi|315187956|gb|EFU21692.1| cytochrome C biogenesis protein transmembrane region [Streptococcus
anginosus F0211]
Length = 236
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 92/191 (48%), Gaps = 16/191 (8%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQII-GDSIA-------- 166
+S L +F AG+++ SPC L +LP+ +G + + + R II G IA
Sbjct: 2 ISIVFLISVFLAGILSFFSPCILPLLPVYVGIL--LDTDEPRIIIIFGKKIAWYGIVKTL 59
Query: 167 -FSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDN 225
F GL+ +LG GA F GK L A + + +G++ +E+I +L +
Sbjct: 60 FFIAGLSVVFLILGYGAGFLGKVLYTEWFRYVLGA--IVVFLGVHQMELINFKLLQRQKS 117
Query: 226 FDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLI-GGTLLLSYT 284
+ N A+L G+TF+ +PC PVL+++L A+ + + GG L+L YT
Sbjct: 118 VQLKKDK-NRNDFYNAFLLGVTFSFGWTPCVGPVLSSVLAIAASGGNGAVQGGFLMLVYT 176
Query: 285 TGYVAPLLLAA 295
G P L+ A
Sbjct: 177 LGLAIPFLILA 187
>gi|336312742|ref|ZP_08567688.1| cytochrome c-type biogenesis protein DsbD, protein-disulfide
reductase [Shewanella sp. HN-41]
gi|335863703|gb|EGM68832.1| cytochrome c-type biogenesis protein DsbD, protein-disulfide
reductase [Shewanella sp. HN-41]
Length = 611
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
+L + FG G+ +L+PC + P+ G I G S A+ S+A+ G+A T ++LG
Sbjct: 201 TLVIFFGLGIGLALTPCVFPMYPILSGIIVGQGQKLSTAKAFTLSMAYVQGMAITYSILG 260
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAI---VMGLNLLEIIELQLP-SFFDNFDPRAAAANF 235
+ + AG Y Q P LAI V+ L++ + +L+LP S+ + + +
Sbjct: 261 LVVASAGLKY-QAALQHPAVLVVLAILFFVLSLSMFGLYDLKLPSSWQEKMNSVSNNQKG 319
Query: 236 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
+ V +L G+ L ASPC+T L+ L YVA + D L G L + G PLL+
Sbjct: 320 GNLVGVFLMGVISGLVASPCTTAPLSGALVYVAQTGDLLQGFLALYVLSMGMGVPLLIIG 379
Query: 296 SFAGALQSLLSFRKFSSWIN 315
+ G L + +W+N
Sbjct: 380 TSGGKL-----LPRAGAWMN 394
>gi|433655245|ref|YP_007298953.1| cytochrome c biogenesis protein [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293434|gb|AGB19256.1| cytochrome c biogenesis protein [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 220
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 20/193 (10%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASF 184
F G+++ SPC L ++P+ + YI FG K + F LG + L+G AS
Sbjct: 7 FMGGILSFFSPCILPLIPVYVTYI--FGGKKKN---FFNLFLFILGFSIVFILMGATASQ 61
Query: 185 AGKAYGQIGTGLPLAASGLAIVM-GLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYL 243
GK + L ASG+ I++ GL ++ I P F + + A N + YL
Sbjct: 62 LGKIFVSYKV-LFRKASGIIILLFGLYMMGAIR---PMFLN----KEAKLNVSGMKEGYL 113
Query: 244 A----GLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
+ G+TFA +PC P+LAT+L Y T+ +G LL +Y+ G P ++AA
Sbjct: 114 SSFIFGITFAAGWTPCVGPILATILLYAGTTSTVSVGVILLFAYSLGVGLPFIVAAILID 173
Query: 300 ALQSLLSFRKFSS 312
+S ++K +S
Sbjct: 174 RFKSF--YKKINS 184
>gi|422851671|ref|ZP_16898341.1| cytochrome c-type biogenesis protein CcdA [Streptococcus sanguinis
SK150]
gi|325694559|gb|EGD36468.1| cytochrome c-type biogenesis protein CcdA [Streptococcus sanguinis
SK150]
Length = 236
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 112/231 (48%), Gaps = 15/231 (6%)
Query: 115 ALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRA-QIIGDSIAFSLGLAT 173
A SF +F AG+++ SPC L ++P+ +G + S + +A + +G I++ GLA
Sbjct: 2 ATSFLFFISVFLAGILSFFSPCILPLMPVYVGIL--LDSDQPKAVRFMGKDISWY-GLAK 58
Query: 174 TLALL-GVGASFAGKAYGQIGTGLPLAA-------SGLAIVMGLNLLEIIELQLPSFFDN 225
TL + G+ F YG G L A G+ I++G++ + II +Q +
Sbjct: 59 TLCFIAGLSTVFLVLGYGAGALGQVLYAPWFRYVLGGIVILLGIHQMGIINIQQLQKQKS 118
Query: 226 FDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKD-PLIGGTLLLSYT 284
+ + + A+L G+TF+ +PC PVL+++L A+ + L GG L+L YT
Sbjct: 119 IQLKKNSKR-SDFLNAFLLGITFSFGWTPCVGPVLSSVLAIAASGGNGALQGGLLMLVYT 177
Query: 285 TGYVAPLLLAASFAG-ALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
G P L A +G LQ + + + + GAL++ G+ L L
Sbjct: 178 LGLALPFLAMALASGWVLQRFAKLKPYMGTLKKIGGALIILMGILLMLGNL 228
>gi|339503767|ref|YP_004691187.1| cytochrome c-type biogenesis protein CcdA [Roseobacter litoralis
Och 149]
gi|338757760|gb|AEI94224.1| cytochrome c-type biogenesis protein CcdA [Roseobacter litoralis
Och 149]
Length = 250
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAF------GSGKSRAQIIGDSIAFSLGLATTLALLGV 180
AG+++ LSPC L ++P L Y+ G G +R + I ++ F +GL+T +LG
Sbjct: 21 AGIISFLSPCVLPIVPPYLAYMSGVSLNEMSGEGAARRRAIIAALFFVMGLSTVFLILGF 80
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVM-GLNLLEIIELQLPSFFDNFDPRAAAANFPSSV 239
AS G + Q L SG+ I++ GL+ L I L++P F D A SS
Sbjct: 81 TASAFGAFFLQ-NQILFARISGIVIILFGLHFLGI--LRIP-FLDREARMDAGDKGGSSF 136
Query: 240 QAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGYVAPLLLAASF- 297
AY+ GL FA +PC P L +L +A S+ + GTLLL Y G P LLAA F
Sbjct: 137 GAYVLGLAFAFGWTPCIGPQLGAILS-LAASEASVTRGTLLLGVYAAGLGIPFLLAAMFI 195
Query: 298 AGALQSLLSFRKFSSWINPMSGALLL 323
A+ + ++ I + G LLL
Sbjct: 196 TRAMGVMDRLKRHMKMIERVMGGLLL 221
>gi|450063986|ref|ZP_21845188.1| putative cytochrome C biogenesis protein [Streptococcus mutans
NLML5]
gi|449204106|gb|EMC04924.1| putative cytochrome C biogenesis protein [Streptococcus mutans
NLML5]
Length = 258
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-------SIAFS 168
L ++ +F GL++ SPC L +LP+ +G + G K +II D + F
Sbjct: 24 LQHITILTLFIEGLLSFFSPCVLPILPVYIGILAGQGEEKQSGEIIWDRRKVFTNTFLFI 83
Query: 169 LGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
G+A T +L +S + L L ++MGL + +I+ S F N +
Sbjct: 84 SGIAATFFILAFASSLISQFLKSHIQFLQNLGGILILIMGLVQVGLIK----SHFFNREY 139
Query: 229 RAAAANFPSSVQ-----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSY 283
A + + + A+L G TF+ + +PC P+LA + Y +T + + L+L Y
Sbjct: 140 SAKNKVYQAGQKVTPLIAFLMGFTFSFSWTPCIGPILAGVFLYASTHQG-IYSVLLILIY 198
Query: 284 TTGYVAPLLLAASFAGALQSLLSFRK 309
G+V P L A F+ + S+ +K
Sbjct: 199 CLGFVIPFALIALFSQRVMSVFKKQK 224
>gi|238020353|ref|ZP_04600779.1| hypothetical protein GCWU000324_00233 [Kingella oralis ATCC 51147]
gi|237867333|gb|EEP68339.1| hypothetical protein GCWU000324_00233 [Kingella oralis ATCC 51147]
Length = 610
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 18/213 (8%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYI-GAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGA 182
+FG GL S + C +LP+ I G GK RA + S + GLA T L+GV A
Sbjct: 208 VFGLGL--SFTACMYPLLPIVSSIIVGDKSGGKRRAFAL--SFVYVQGLALTYTLVGVLA 263
Query: 183 SFAG---KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDN-FDPRAAAANFPSS 238
G + Q + LAA+GL +++ L++ + +QLPS + F ++ +
Sbjct: 264 GLTGALLTVWLQ-QAWVVLAAAGLMVLLALSMFGLFNIQLPSALQSYFQTQSNKLSGGKV 322
Query: 239 VQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFA 298
++ G+ AL PC P LA LGY+ + D L+GG L + G PL+L +F
Sbjct: 323 ASVFVMGMLSALIVGPCVAPPLAFALGYIGKTGDALLGGAALYAMALGTGVPLMLIGTFG 382
Query: 299 GALQSLLSFRKFSSWINPMS---GALLLGGGLY 328
G + + W+N + G +LL +Y
Sbjct: 383 GHI-----LPRAGDWMNGIKYAFGVILLAVAVY 410
>gi|358463859|ref|ZP_09173836.1| cytochrome C biogenesis protein transmembrane region [Streptococcus
sp. oral taxon 058 str. F0407]
gi|357067700|gb|EHI77795.1| cytochrome C biogenesis protein transmembrane region [Streptococcus
sp. oral taxon 058 str. F0407]
Length = 236
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 99/222 (44%), Gaps = 37/222 (16%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSL-----------GLA 172
+F AG+++ SPC L +LP+ Y G K AQ + + SL G++
Sbjct: 10 VFLAGILSFFSPCILPLLPV---YAGVLLDDKDGAQASSEKFSISLVSLLRTLAFIAGIS 66
Query: 173 TTLALLGVGASFAGK----AYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
LLG GA F G ++ Q TG + I++GL+ +E++ LQ
Sbjct: 67 FIFILLGYGAGFLGNLLYASWFQYVTG------AVIILLGLHQMEVLHLQGLYKERRLQL 120
Query: 229 RAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAT-SKDPLIGGTLLLSYTTGY 287
+ QA+L GLTF+ A +PC PVL ++L A+ G L+L YT G
Sbjct: 121 KRQGQKGNGYSQAFLLGLTFSFAWTPCVGPVLGSVLALAASGGSGAWQGAGLMLVYTLGL 180
Query: 288 VAPLL---LAASFAGALQSLLSFRKFSSWINPMSGALLLGGG 326
P L LA+S+ L FRK I+P G L GG
Sbjct: 181 ALPFLVLALASSYV-----LKHFRK----IHPYLGTLKKVGG 213
>gi|113971736|ref|YP_735529.1| thiol:disulfide interchange protein precursor [Shewanella sp. MR-4]
gi|113886420|gb|ABI40472.1| Protein-disulfide reductase [Shewanella sp. MR-4]
Length = 613
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
+L + FG G+ +L+PC + P+ G I G S A+ S+A+ G+A T ++LG
Sbjct: 203 TLVIFFGLGIGLALTPCVFPMYPILSGIIVGQGQKLSTAKAFTLSMAYVQGMAITYSILG 262
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAI---VMGLNLLEIIELQLP-SFFDNFDPRAAAANF 235
+ + AG Y Q P LAI V+ L++ + +L+LP S+ + + +
Sbjct: 263 LVVASAGMKY-QAALQHPAVLIFLAILFFVLSLSMFGLYDLKLPSSWQEKMNSISNNQKG 321
Query: 236 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
+ V +L G+ L ASPC+T L+ L YVA + D L G L + G PLL+
Sbjct: 322 GNLVGVFLMGVISGLVASPCTTAPLSGALVYVAQTGDLLQGFLALYVLSMGMGVPLLIIG 381
Query: 296 SFAGALQSLLSFRKFSSWIN 315
+ G L + +W+N
Sbjct: 382 TSGGKL-----LPRAGAWMN 396
>gi|449932414|ref|ZP_21802835.1| putative cytochrome C biogenesis protein [Streptococcus mutans
3SN1]
gi|449937166|ref|ZP_21804397.1| putative cytochrome C biogenesis protein [Streptococcus mutans
2ST1]
gi|450155598|ref|ZP_21878332.1| putative cytochrome C biogenesis protein [Streptococcus mutans 21]
gi|449161385|gb|EMB64579.1| putative cytochrome C biogenesis protein [Streptococcus mutans
3SN1]
gi|449164625|gb|EMB67673.1| putative cytochrome C biogenesis protein [Streptococcus mutans
2ST1]
gi|449237019|gb|EMC35912.1| putative cytochrome C biogenesis protein [Streptococcus mutans 21]
Length = 237
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-------SIAFS 168
L ++ +F GL++ SPC L +LP+ +G + G K +II D + F
Sbjct: 3 LQHITILTLFIEGLLSFFSPCVLPILPVYIGILAGQGKEKQSGEIIWDRRKVFTNTFLFI 62
Query: 169 LGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
G+A T +L +S + L L ++MGL + +I+ S F N +
Sbjct: 63 SGIAATFFILAFASSLISQFLQSHIQFLQNLGGILILIMGLVQVGLIK----SHFFNREY 118
Query: 229 RAAAANFPSSVQ-----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSY 283
A + + + A+L G TF+ + +PC P+LA++ Y A++ + L+L Y
Sbjct: 119 SAKNKVYQAGQKVTPLIAFLMGFTFSFSWTPCIGPILASVFLY-ASTHQSIYSVLLILIY 177
Query: 284 TTGYVAPLLLAASFA----GALQSLLSFRKFSS 312
G+V P L A F+ G + F K++
Sbjct: 178 CLGFVIPFALVALFSQRVMGVFKKQKRFLKYTK 210
>gi|114046056|ref|YP_736606.1| thiol:disulfide interchange protein precursor [Shewanella sp. MR-7]
gi|113887498|gb|ABI41549.1| Protein-disulfide reductase [Shewanella sp. MR-7]
Length = 613
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
+L + FG G+ +L+PC + P+ G I G S A+ S+A+ G+A T ++LG
Sbjct: 203 TLVIFFGLGIGLALTPCVFPMYPILSGIIVGQGQKLSTAKAFTLSMAYVQGMAITYSILG 262
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAI---VMGLNLLEIIELQLP-SFFDNFDPRAAAANF 235
+ + AG Y Q P LAI V+ L++ + +L+LP S+ + + +
Sbjct: 263 LVVASAGMKY-QAALQHPAVLIFLAILFFVLSLSMFGLYDLKLPSSWQEKMNSISNNQKG 321
Query: 236 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
+ V +L G+ L ASPC+T L+ L YVA + D L G L + G PLL+
Sbjct: 322 GNLVGVFLMGVISGLVASPCTTAPLSGALVYVAQTGDLLQGFLALYVLSMGMGVPLLIIG 381
Query: 296 SFAGALQSLLSFRKFSSWIN 315
+ G L + +W+N
Sbjct: 382 TSGGKL-----LPRAGAWMN 396
>gi|406577884|ref|ZP_11053464.1| cytochrome c biogenesis protein CcdA [Streptococcus sp. GMD6S]
gi|419818371|ref|ZP_14342417.1| cytochrome c biogenesis protein CcdA [Streptococcus sp. GMD4S]
gi|404458970|gb|EKA05345.1| cytochrome c biogenesis protein CcdA [Streptococcus sp. GMD6S]
gi|404463299|gb|EKA08981.1| cytochrome c biogenesis protein CcdA [Streptococcus sp. GMD4S]
Length = 236
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 33/214 (15%)
Query: 124 IFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQI-----------IGDSIAFSLGLA 172
+F AG+++ SPC L +LP+ Y G K+ AQ + ++AF G++
Sbjct: 10 VFLAGILSFFSPCILPLLPV---YAGVLLDDKNDAQASSGKFSISLVSLLRTLAFIAGIS 66
Query: 173 TTLALLGVGASFAGK----AYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
LLG GA F G ++ Q TG + I++GL+ +E++ LQ
Sbjct: 67 FIFILLGYGAGFLGNLLYASWFQYVTG------AIIILLGLHQMEVLHLQGLYKERRLQL 120
Query: 229 RAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAT-SKDPLIGGTLLLSYTTGY 287
+ QA+L GLTF+ A +PC PVL ++L A+ L G L+L +T G
Sbjct: 121 KRQGQKGNGYSQAFLLGLTFSFAWTPCVGPVLGSVLALAASGGSGALQGAGLMLVFTLGL 180
Query: 288 VAPLL---LAASFAGALQSLLSFRKFSSWINPMS 318
P L LA+S+ L FRK ++ +
Sbjct: 181 ALPFLVLALASSYV-----LKHFRKLHPYLGTLK 209
>gi|220915736|ref|YP_002491040.1| cytochrome c biogenesis protein transmembrane protein
[Anaeromyxobacter dehalogenans 2CP-1]
gi|219953590|gb|ACL63974.1| cytochrome c biogenesis protein transmembrane region
[Anaeromyxobacter dehalogenans 2CP-1]
Length = 471
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 90/182 (49%), Gaps = 11/182 (6%)
Query: 108 AVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAF 167
A+L + S L+F AV F G+ TSL+PC ++P+T+ GA +G SR + + S +
Sbjct: 39 ALLAEGSVLAF---AVAFAGGVATSLTPCVYPLIPITVSIFGARKAG-SRGEAMAVSALY 94
Query: 168 SLGLATTLALLGVGASFAGKAYGQIGTGLPLA---ASGLAIVMGLNLLEIIELQLPSFFD 224
LG+A + LGVGA+ GKA+G + P + + M ++ ELQLP+
Sbjct: 95 VLGIAAMYSALGVGAALTGKAFGSVMQN-PWVIGFVALVLAAMAASMFGAFELQLPA--- 150
Query: 225 NFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYT 284
+ R A+ GL + A+PC+ PVLA L +VA G ++ +Y
Sbjct: 151 SMQARLNGVGGAGRAGAFAMGLVSGIIAAPCTGPVLAAALTFVAAKGSVAFGFGIMFAYA 210
Query: 285 TG 286
G
Sbjct: 211 LG 212
>gi|342904844|ref|ZP_08726641.1| Putative cytochrome c-type biogenesis protein [Haemophilus
haemolyticus M21621]
gi|341952443|gb|EGT78970.1| Putative cytochrome c-type biogenesis protein [Haemophilus
haemolyticus M21621]
Length = 213
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGV 180
+ +F AGL + LSPC ++P+ Y G G + ++ F LGL+ T LG
Sbjct: 8 IGTVFLAGLASFLSPCIFPIIPI---YFGILSKGGKKVL---NTFLFILGLSLTFVSLGF 61
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
F G T + A + I++G++ L I ++ L + + + + ++++
Sbjct: 62 SFGFLGNILFSNTT--RIIAGVIVIILGIHQLGIFKIGLLERTKLVEIKTSGKS--TALE 117
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGA 300
A++ GLTF+L +PC P+LA++L L G +++ Y G P +L + F+ +
Sbjct: 118 AFVLGLTFSLGWTPCIGPILASVLALSGDEGSALYGASMMFVYVLGLATPFVLFSFFSDS 177
Query: 301 L 301
L
Sbjct: 178 L 178
>gi|392393197|ref|YP_006429799.1| thiol:disulfide interchange protein [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390524275|gb|AFM00006.1| thiol:disulfide interchange protein [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 235
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 11/208 (5%)
Query: 117 SFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLA 176
S+ +A +F G+V S++PC +++PL LG G+ G SR + F LG A TL
Sbjct: 16 SWWFMASMFVGGIVLSINPCMGAMVPLVLG--GSRQEGYSRV------VQFILGFALTLM 67
Query: 177 LLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEI-IELQLPSFFDNFDPRAAAANF 235
L+G A+ G + G + L +V G +L +++ F+ + F
Sbjct: 68 LIGALAARVGILFRLPGMYWTIFLGALYLVAGAIMLGFRFPVKVSGFYVTQRRGPSRPIF 127
Query: 236 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
P + ++ G FALA SPC+TPV+ + G S + L ++ G+ LLLA
Sbjct: 128 PKGLSPWMLGSFFALAPSPCTTPVILMISGTAMASGQIIYSALGLGAFGLGH--SLLLAM 185
Query: 296 SFAGALQSLLSFRKFSSWINPMSGALLL 323
+F ++ L +++ + P+ G LL+
Sbjct: 186 AFLPGVRGLFKMNRWTRQLRPVIGILLI 213
>gi|418292088|ref|ZP_12904038.1| thiol:disulfide interchange protein precursor [Pseudomonas stutzeri
ATCC 14405 = CCUG 16156]
gi|379063521|gb|EHY76264.1| thiol:disulfide interchange protein precursor [Pseudomonas stutzeri
ATCC 14405 = CCUG 16156]
Length = 588
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 115/258 (44%), Gaps = 30/258 (11%)
Query: 99 YSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRA 158
+ G A L Q A+ + SLA+ F AGL + +PC L +LP+ G + G +R
Sbjct: 152 FEVGDPPLIAALQQGVAIDWRSLALFFLAGLGLTFTPCVLPMLPILSGVVLRGQLGGTRG 211
Query: 159 QIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAA-----------SGLAIVM 207
+ S+A+ L +A + ALLG G G GL L A + V
Sbjct: 212 LRL--SLAYVLPMAASFALLGA-------LMGMFGAGLNLQARLQSPWLLVPFAMFFTVF 262
Query: 208 GLNLLEIIELQLPSFF-DNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGY 266
L + + EL++P F + D A A S + A G+ +L SPC T L L Y
Sbjct: 263 ALAMFGVFELRMPRFITERLDLLAGQARGGSMLGAATLGVLSSLLVSPCVTAPLVGALLY 322
Query: 267 VATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSW---INPMSGALLL 323
++T+ D L GG L + G APL+L A GAL K +W + G +LL
Sbjct: 323 ISTTGDALGGGLKLFALGLGMGAPLVLFAIGGGAL-----LPKSGTWMVGVRKAFGVMLL 377
Query: 324 GGGLYTFLDRLFPTTMAM 341
++ L+R+ P + +
Sbjct: 378 AVSVW-LLERVLPAPVTL 394
>gi|83943440|ref|ZP_00955899.1| c-type cytochrome biogenesis protein [Sulfitobacter sp. EE-36]
gi|83845672|gb|EAP83550.1| c-type cytochrome biogenesis protein [Sulfitobacter sp. EE-36]
Length = 242
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 89/190 (46%), Gaps = 13/190 (6%)
Query: 116 LSFTSLAVIFG--AGLVTSLSPCTLSVLPLTLGYI----GAFGSGKSRAQIIGDSIAFSL 169
L +SL VI AG ++ +SPC L ++P + YI GA G+ +SR+Q + S F L
Sbjct: 2 LDVSSLGVIAALLAGTISFVSPCVLPLVPGYVSYIAGRTGAAGAERSRSQAVWLSFCFVL 61
Query: 170 GLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPR 229
G +T LG A+ G+A + L L + I+ GL +L +Q F+
Sbjct: 62 GFSTIFMALGASATALGQALLRWRFELNLIGGAVVILFGLFMLGAARVQTMERDLRFN-- 119
Query: 230 AAAANFP--SSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGY 287
+ P V AY+ GL F +PC P+L +L A S G LL Y+ G
Sbjct: 120 ---LDLPGGQPVAAYVLGLAFGFGWTPCIGPILGAILTASAASATISEGVWLLGIYSAGL 176
Query: 288 VAPLLLAASF 297
P L+ A+F
Sbjct: 177 GVPFLIVAAF 186
>gi|387773812|ref|ZP_10129097.1| cytochrome C biogenesis protein transmembrane region [Haemophilus
parahaemolyticus HK385]
gi|386903633|gb|EIJ68440.1| cytochrome C biogenesis protein transmembrane region [Haemophilus
parahaemolyticus HK385]
Length = 213
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGV 180
+ +F AGL + LSPC ++P+ Y G G + ++ F LGL+ T LG
Sbjct: 8 IGTVFLAGLASFLSPCIFPIIPI---YFGILSKGGKKVL---NTFLFILGLSLTFVSLGF 61
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
F G T + A + I++G++ L I ++ L + + + + ++++
Sbjct: 62 SFGFLGNILFSNTT--RIIAGVIVIILGIHQLGIFKIGLLERTKLVEIKTSGKS--TALE 117
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGA 300
A++ GLTF+L +PC P+LA++L L G +++ Y G P +L + F+ +
Sbjct: 118 AFVLGLTFSLGWTPCIGPILASVLALSGDEGSALYGASMMFVYVLGLATPFVLFSFFSDS 177
Query: 301 L 301
L
Sbjct: 178 L 178
>gi|409397410|ref|ZP_11248305.1| thiol:disulfide interchange protein precursor [Pseudomonas sp.
Chol1]
gi|419953655|ref|ZP_14469799.1| thiol:disulfide interchange protein precursor [Pseudomonas stutzeri
TS44]
gi|387969715|gb|EIK53996.1| thiol:disulfide interchange protein precursor [Pseudomonas stutzeri
TS44]
gi|409118102|gb|EKM94520.1| thiol:disulfide interchange protein precursor [Pseudomonas sp.
Chol1]
Length = 590
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 115/258 (44%), Gaps = 30/258 (11%)
Query: 99 YSAGQQANEAVLGQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRA 158
+ G A L Q A+ + SLA+ F AGL + +PC L +LP+ G + G +R
Sbjct: 154 FEVGDPPLIAALQQGVAIDWRSLALFFLAGLGLTFTPCVLPMLPILSGVVLRGQLGGTRG 213
Query: 159 QIIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGTGLPLAA-----------SGLAIVM 207
+ S+A+ L +A + ALLG G G GL L A + V
Sbjct: 214 LRL--SLAYVLPMAASFALLGA-------LMGMFGAGLNLQARLQSPWLLVPFAMFFTVF 264
Query: 208 GLNLLEIIELQLPSFF-DNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGY 266
L + + EL++P F + D A A S + A G+ +L SPC T L L Y
Sbjct: 265 ALAMFGVFELRMPRFITERLDLLAGQARGGSMLGAATLGVLSSLLVSPCVTAPLVGALLY 324
Query: 267 VATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSW---INPMSGALLL 323
++T+ D L GG L + G APL+L A GAL K +W + G +LL
Sbjct: 325 ISTTGDALGGGLKLFALGLGMGAPLVLFAIGGGAL-----LPKSGTWMVGVRKAFGVMLL 379
Query: 324 GGGLYTFLDRLFPTTMAM 341
++ L+R+ P + +
Sbjct: 380 AVSVW-LLERVLPAPVTL 396
>gi|334128472|ref|ZP_08502360.1| cytochrome c-type biogenesis protein CcdA [Centipeda periodontii
DSM 2778]
gi|333387149|gb|EGK58352.1| cytochrome c-type biogenesis protein CcdA [Centipeda periodontii
DSM 2778]
Length = 227
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 8/190 (4%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGS---GKSRAQIIGDSIAFSLGLATTLALLGVG 181
F AG ++ +SPC L +LP T I A S G+ ++ ++ AF G LLG
Sbjct: 10 FLAGFLSFISPCVLPLLP-TFSLILAKNSSQDGRETQRLYTNTTAFLAGFTLVFVLLGAT 68
Query: 182 ASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQA 241
AS+ G L A+ L IVMGL + I++ P + P F A
Sbjct: 69 ASYIGSWLFSYQEILRQGAAILIIVMGLFMTGWIKI--PLLLREYRP-FQRRGFGGIGGA 125
Query: 242 YLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAP-LLLAASFAGA 300
+L G F L +PC+ P+LAT+L Y + G LLL Y+ G+ P LLA +
Sbjct: 126 FLLGCGFTLGWTPCTGPMLATILLYAGDTATVGAGAFLLLVYSLGFAVPFFLLAVIWRRH 185
Query: 301 LQSLLSFRKF 310
+ L +F ++
Sbjct: 186 IMKLRAFYQY 195
>gi|422860190|ref|ZP_16906834.1| cytochrome c-type biogenesis protein CcdA [Streptococcus sanguinis
SK330]
gi|327470088|gb|EGF15552.1| cytochrome c-type biogenesis protein CcdA [Streptococcus sanguinis
SK330]
Length = 235
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 111/239 (46%), Gaps = 32/239 (13%)
Query: 114 SALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRA--QIIGDSIA----- 166
S L F S +F AG+++ SPC +LP+ YIG K ++ G +A
Sbjct: 3 SPLFFVS---VFLAGILSFFSPCIFPLLPV---YIGILLDAKEVKTLKVFGRELAWQGMV 56
Query: 167 ----FSLGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEII---ELQL 219
F G++T LLG GA F G + GL I++GL+ +E+I +LQ+
Sbjct: 57 RTLFFIAGISTVFFLLGFGAGFLGTII--YSSTFRYVMGGLIILLGLHQMELINIRQLQI 114
Query: 220 PSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTL 279
F +F S A+L G+TF+ +PC P+L+++L A+ + G +
Sbjct: 115 QKSL-TFKKNGQKHHFWS---AFLLGITFSFGWTPCIGPILSSVLALAASGGNGAFQGAI 170
Query: 280 L-LSYTTGYVAPLL---LAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRL 334
L L YT G P L LA+SF +Q + + + + GAL++ G+ L +L
Sbjct: 171 LTLIYTLGMALPFLILALASSF--VMQYFNKIKPYMGLMKKIGGALIILMGILLMLGQL 227
>gi|117922012|ref|YP_871204.1| thiol:disulfide interchange protein [Shewanella sp. ANA-3]
gi|117614344|gb|ABK49798.1| cytochrome c biogenesis protein, transmembrane region [Shewanella
sp. ANA-3]
Length = 613
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLG 179
+L + FG G+ +L+PC + P+ G I G S A+ S+A+ G+A T ++LG
Sbjct: 203 TLVIFFGLGIGLALTPCVFPMYPILSGIIVGQGQKLSTAKAFTLSMAYVQGMAITYSILG 262
Query: 180 VGASFAGKAYGQIGTGLPLAASGLAI---VMGLNLLEIIELQLP-SFFDNFDPRAAAANF 235
+ + AG Y Q P LAI V+ L++ + +L+LP S+ + + +
Sbjct: 263 LVVASAGMKY-QAALQHPAVLIFLAILFFVLSLSMFGLYDLKLPSSWQEKMNSISNNQKG 321
Query: 236 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAA 295
+ V +L G+ L ASPC+T L+ L YVA + D L G L + G PLL+
Sbjct: 322 GNLVGVFLMGVISGLVASPCTTAPLSGALVYVAQTGDLLQGFLALYVLSMGMGVPLLIIG 381
Query: 296 SFAGALQSLLSFRKFSSWIN 315
+ G L + +W+N
Sbjct: 382 TSGGKL-----LPRAGAWMN 396
>gi|16273360|ref|NP_439605.1| hypothetical protein HI1454 [Haemophilus influenzae Rd KW20]
gi|145638931|ref|ZP_01794539.1| conserved hypothetical cytochrome c-type biogenesis protein
[Haemophilus influenzae PittII]
gi|260580711|ref|ZP_05848537.1| cytochrome c biogenesis protein [Haemophilus influenzae RdAW]
gi|373467052|ref|ZP_09558356.1| cytochrome C biogenesis protein transmembrane region [Haemophilus
sp. oral taxon 851 str. F0397]
gi|386390063|ref|ZP_10074859.1| cytochrome C biogenesis protein transmembrane region [Haemophilus
paraphrohaemolyticus HK411]
gi|417840150|ref|ZP_12486301.1| Putative cytochrome c-type biogenesis protein [Haemophilus
haemolyticus M19107]
gi|417841678|ref|ZP_12487781.1| Putative cytochrome c-type biogenesis protein [Haemophilus
haemolyticus M19501]
gi|417845506|ref|ZP_12491534.1| Putative cytochrome c-type biogenesis protein [Haemophilus
haemolyticus M21639]
gi|1175806|sp|P44202.1|Y1454_HAEIN RecName: Full=Putative cytochrome c-type biogenesis protein HI_1454
gi|1574292|gb|AAC23102.1| cytochrome C-type biogenesis protein [Haemophilus influenzae Rd
KW20]
gi|145271903|gb|EDK11812.1| conserved hypothetical cytochrome c-type biogenesis protein
[Haemophilus influenzae PittII]
gi|260092528|gb|EEW76465.1| cytochrome c biogenesis protein [Haemophilus influenzae RdAW]
gi|309750900|gb|ADO80884.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
gi|341948899|gb|EGT75514.1| Putative cytochrome c-type biogenesis protein [Haemophilus
haemolyticus M19501]
gi|341950029|gb|EGT76625.1| Putative cytochrome c-type biogenesis protein [Haemophilus
haemolyticus M19107]
gi|341955076|gb|EGT81541.1| Putative cytochrome c-type biogenesis protein [Haemophilus
haemolyticus M21639]
gi|371759429|gb|EHO48162.1| cytochrome C biogenesis protein transmembrane region [Haemophilus
sp. oral taxon 851 str. F0397]
gi|385693747|gb|EIG24379.1| cytochrome C biogenesis protein transmembrane region [Haemophilus
paraphrohaemolyticus HK411]
Length = 213
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 121 LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGV 180
+ +F AGL + LSPC ++P+ Y G G + ++ F LGL+ T LG
Sbjct: 8 IGTVFLAGLASFLSPCIFPIIPI---YFGILSKGGKKVL---NTFLFILGLSLTFVSLGF 61
Query: 181 GASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQ 240
F G T + A + I++G++ L I ++ L + + + + ++++
Sbjct: 62 SFGFLGNILFSNTT--RIIAGVIVIILGIHQLGIFKIGLLERTKLVEIKTSGKS--TALE 117
Query: 241 AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGA 300
A++ GLTF+L +PC P+LA++L L G +++ Y G P +L + F+ +
Sbjct: 118 AFVLGLTFSLGWTPCIGPILASVLALSGDEGSALYGASMMFVYVLGLATPFVLFSFFSDS 177
Query: 301 L 301
L
Sbjct: 178 L 178
>gi|450144814|ref|ZP_21874240.1| putative cytochrome C biogenesis protein [Streptococcus mutans
1ID3]
gi|450175427|ref|ZP_21885160.1| putative cytochrome C biogenesis protein [Streptococcus mutans SM1]
gi|449150046|gb|EMB53823.1| putative cytochrome C biogenesis protein [Streptococcus mutans
1ID3]
gi|449246795|gb|EMC45091.1| putative cytochrome C biogenesis protein [Streptococcus mutans SM1]
Length = 237
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 116 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGD-------SIAFS 168
L ++ +F GL++ SPC L +LP+ +G + G K +II D + F
Sbjct: 3 LQHITILTLFIEGLLSFFSPCVLPILPVYIGILAGQGEEKQSGEIIWDRRKVFTNTFLFI 62
Query: 169 LGLATTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDP 228
G+A T +L +S + L L ++MGL + +I+ S F N +
Sbjct: 63 SGIAATFFILAFASSLISQFLKSHIQFLQNLGGILILIMGLVQVGLIK----SHFFNREY 118
Query: 229 RAAAANFPSSVQ-----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSY 283
A + + + A+L G TF+ + +PC P+LA + Y +T + + L+L Y
Sbjct: 119 SAKNKVYQAGQKVTPLIAFLMGFTFSFSWTPCIGPILAGVFLYASTHQG-IYSVLLILIY 177
Query: 284 TTGYVAPLLLAASFAGALQSLLSFRK 309
G+V P L A F+ + S+ +K
Sbjct: 178 CLGFVIPFALIALFSQRVMSVFKKQK 203
>gi|402299209|ref|ZP_10818838.1| cytochrome C biogenesis protein transmembrane region [Bacillus
alcalophilus ATCC 27647]
gi|401725606|gb|EJS98880.1| cytochrome C biogenesis protein transmembrane region [Bacillus
alcalophilus ATCC 27647]
Length = 238
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 94/188 (50%), Gaps = 23/188 (12%)
Query: 120 SLAVIFGAGLVTSLSPCTLSVLPLTLGYI----GAFGSGK---SRAQIIGDSIAFSLGLA 172
S+ V F AGL++ LSPC +LP YI G+ S K ++ + SI+F LG +
Sbjct: 8 SILVAFTAGLLSFLSPCVFPLLP---AYISTLTGSTVSDKVNVNKKLVFTRSISFILGFS 64
Query: 173 TTLALLGVGASFAGKAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAA 232
LLGV ASF G+ + + + + L I+ GL ++ +++L+ F R
Sbjct: 65 IIFVLLGVSASFIGQMFMENRNIVEKISGLLIIIFGLQMVGLLQLK-------FLMREKR 117
Query: 233 ANFPSSVQ----AYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLS-YTTGY 287
+ S ++L G+ FA SPC VL+++L +A S + + G +LLS Y+ G
Sbjct: 118 IHMQSKRAGAGPSFLIGMAFAFGWSPCVGVVLSSIL-LLAASHETVSSGVILLSVYSLGL 176
Query: 288 VAPLLLAA 295
P L+ +
Sbjct: 177 GIPFLMVS 184
>gi|423136334|ref|ZP_17123977.1| hypothetical protein HMPREF9942_00115 [Fusobacterium nucleatum
subsp. animalis F0419]
gi|371962011|gb|EHO79625.1| hypothetical protein HMPREF9942_00115 [Fusobacterium nucleatum
subsp. animalis F0419]
Length = 218
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 106/213 (49%), Gaps = 19/213 (8%)
Query: 127 AGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASFAG 186
AG+ + SPC ++P+ YI +G+ ++ I ++AF LGL+ T +LG GA G
Sbjct: 14 AGVASFFSPCIFPIIPV---YISILSNGEKKS--ISKTLAFVLGLSVTYIVLGFGAGVIG 68
Query: 187 KAYGQIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQA----Y 242
+ + + + + +++GL +E+++L+ F + N+ Q+ +
Sbjct: 69 DLF--LNNKVRIIGGIIVVILGLFQMEVLKLK-------FLEKTKIMNYEGENQSIFSTF 119
Query: 243 LAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQ 302
L GLTF+L +PC P+LA++L ++S D L+ Y G P ++ + + AL
Sbjct: 120 LLGLTFSLGWTPCVGPILASILILASSSGDTTNSIMLMFIYLLGMATPFVIFSLASKALF 179
Query: 303 SLLSF-RKFSSWINPMSGALLLGGGLYTFLDRL 334
+SF +K+ I + G L++ G ++L
Sbjct: 180 KKMSFIKKYLPTIKKVGGFLIIIMGFLLIFNKL 212
>gi|304317065|ref|YP_003852210.1| cytochrome C biogenesis protein transmembrane region
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|302778567|gb|ADL69126.1| cytochrome c biogenesis protein transmembrane region
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
Length = 220
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 20/193 (10%)
Query: 125 FGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAQIIGDSIAFSLGLATTLALLGVGASF 184
F G+++ SPC L ++P+ + YI FG K + F LG + L+G AS
Sbjct: 7 FMGGILSFFSPCILPLIPVYVTYI--FGGKKKN---FFNLFLFILGFSIVFILMGATASQ 61
Query: 185 AGKAYGQIGTGLPLAASGLAIVM-GLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYL 243
GK + L ASG+ I++ GL ++ I P F + + A N + YL
Sbjct: 62 LGKIFVSYKV-LFRKASGIIILLFGLYMMGAIR---PIFLN----KEAKLNVSGMKEGYL 113
Query: 244 A----GLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAG 299
+ G+TFA +PC P+LAT+L Y T+ +G LL +Y+ G P ++AA
Sbjct: 114 SSFIFGITFAAGWTPCVGPILATILLYAGTTSTVSVGVILLFAYSLGVGLPFIVAAILID 173
Query: 300 ALQSLLSFRKFSS 312
+S ++K +S
Sbjct: 174 RFKSF--YKKINS 184
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.134 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,966,883,740
Number of Sequences: 23463169
Number of extensions: 205386816
Number of successful extensions: 708960
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1945
Number of HSP's successfully gapped in prelim test: 3688
Number of HSP's that attempted gapping in prelim test: 697934
Number of HSP's gapped (non-prelim): 6354
length of query: 341
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 198
effective length of database: 9,003,962,200
effective search space: 1782784515600
effective search space used: 1782784515600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 77 (34.3 bits)