BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019424
(341 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9V3R6|ADAT1_DROME tRNA-specific adenosine deaminase 1 OS=Drosophila melanogaster
GN=adat PE=2 SV=1
Length = 394
Score = 143 bits (361), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/255 (38%), Positives = 137/255 (53%), Gaps = 31/255 (12%)
Query: 9 EVSKKVLWQYKSLPKKGKPQGREVTVLAAFL-ISSPSKDLEVVALGTGTKCIGRSLLSPH 67
E+++ L +++SLPK GKP + T+LA + + ++ ++V+LG GTKCIG S L P+
Sbjct: 11 EIAELCLKKFESLPKTGKPTANQWTILAGIVEFNRNTEACQLVSLGCGTKCIGESKLCPN 70
Query: 68 GDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVF--NNFLFELGPTGKYRF 125
G I+NDSHAE++ARR LRF Y E+ KQ D +F N+ L Y
Sbjct: 71 GLILNDSHAEVLARRGFLRFLYQEL--KQ----------DRIFHWNSTL------STYDM 112
Query: 126 REGWQLHLYISQLPCGDAS-LSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDS--LQH 182
E + H +Q PCGDA L A R R V + D LQ
Sbjct: 113 DEHVEFHFLSTQTPCGDACILEEEQPAARAKRQRLDEDSEMVYTGAKLISDLSDDPMLQT 172
Query: 183 IGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFL-QPVYLSSITVGRSPNTSED 241
G ++ KPGRG+ TLS+SCSDKIARWN +GVQGALL + +P+Y SS+ N D
Sbjct: 173 PGALRTKPGRGERTLSMSCSDKIARWNVIGVQGALLDVLISKPIYFSSL------NFCCD 226
Query: 242 FPLEEHLKRSLYDRI 256
E L+R+++ R
Sbjct: 227 DAQLESLERAIFKRF 241
>sp|P51400|RED1_RAT Double-stranded RNA-specific editase 1 OS=Rattus norvegicus
GN=Adarb1 PE=1 SV=1
Length = 711
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 163/334 (48%), Gaps = 42/334 (12%)
Query: 4 ECWGDEVSKKVLWQYKSLPKK-GKPQGREVTVLAAFLISSPS--KDLEVVALGTGTKCIG 60
+ D VS+ VL ++ L P R VL+ ++++ + KD +V+++ TGTKCI
Sbjct: 321 QVLADAVSRLVLGKFSDLTDNFSSPHARR-KVLSGVVMTTGTDVKDAKVISVSTGTKCIN 379
Query: 61 RSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPT 120
+S G +ND HAEI++RR+LLRF Y ++ + N E + +F
Sbjct: 380 GEYMSDRGLALNDCHAEIISRRSLLRFLYAQL---ELYLNNKEDQKKSIFQK-----SER 431
Query: 121 GKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSL 180
G +R ++ Q HLYIS PCGDA + S H + + + L+ + + +
Sbjct: 432 GGFRLKDTVQFHLYISTSPCGDARIFSPHEPVLEGMAPDSHQLTEPADRHPNRKARGQLR 491
Query: 181 QHI------------GRVQRKPG--RGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVY 226
I +Q G +G+ L++SCSDKIARWN VG+QGALLS F++P+Y
Sbjct: 492 TKIESGEGTIPVRSNASIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGALLSIFVEPIY 551
Query: 227 LSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQH 286
SSI +G +HL R++Y RI + E+L + +NKP+ S +
Sbjct: 552 FSSIILG-------SLYHGDHLSRAMYQRISNI-EDLPPLYTLNKPLLSGIS-------N 596
Query: 287 SETASSTLTCGYSICWNKSGLH-EVILGTTGRKQ 319
+E +S+ W EVI TTG+ +
Sbjct: 597 AEARQPGKAPNFSVNWTVGDTAIEVINATTGKDE 630
>sp|Q91ZS8|RED1_MOUSE Double-stranded RNA-specific editase 1 OS=Mus musculus GN=Adarb1
PE=1 SV=1
Length = 711
Score = 141 bits (355), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 163/334 (48%), Gaps = 42/334 (12%)
Query: 4 ECWGDEVSKKVLWQYKSLPKK-GKPQGREVTVLAAFLISSPS--KDLEVVALGTGTKCIG 60
+ D VS+ VL ++ L P R VL+ ++++ + KD +V+++ TGTKCI
Sbjct: 321 QVLADAVSRLVLGKFSDLTDNFSSPHARR-KVLSGVVMTTGTDVKDAKVISVSTGTKCIN 379
Query: 61 RSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPT 120
+S G +ND HAEI++RR+LLRF Y ++ + N E + +F
Sbjct: 380 GEYMSDRGLALNDCHAEIISRRSLLRFLYAQL---ELYLNNKEDQKKSIFQK-----SER 431
Query: 121 GKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSL 180
G +R ++ Q HLYIS PCGDA + S H + + + L+ + + +
Sbjct: 432 GGFRLKDTVQFHLYISTSPCGDARIFSPHEPVLEGMTPDSHQLTEPADRHPNRKARGQLR 491
Query: 181 QHI------------GRVQRKPG--RGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVY 226
I +Q G +G+ L++SCSDKIARWN VG+QG+LLS F++P+Y
Sbjct: 492 TKIESGEGTIPVRSNASIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLLSIFVEPIY 551
Query: 227 LSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQH 286
SSI +G +HL R++Y RI + E+L + +NKP+ S +
Sbjct: 552 FSSIILG-------SLYHGDHLSRAMYQRISNI-EDLPPLYTLNKPLLSGIS-------N 596
Query: 287 SETASSTLTCGYSICWN-KSGLHEVILGTTGRKQ 319
+E +S+ W EVI TTG+ +
Sbjct: 597 AEARQPGKAPNFSVNWTVGDATIEVINATTGKDE 630
>sp|Q9NS39|RED2_HUMAN Double-stranded RNA-specific editase B2 OS=Homo sapiens GN=ADARB2
PE=1 SV=1
Length = 739
Score = 138 bits (347), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 161/328 (49%), Gaps = 45/328 (13%)
Query: 6 WGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISS--PSKDLEVVALGTGTKCIGRSL 63
+ D +S+ V +++ + P LA +++ ++ +VVAL +GTKCI
Sbjct: 361 FADSISQLVTQKFREVTTDLTPMHARHKALAGIVMTKGLDARQAQVVALSSGTKCISGEH 420
Query: 64 LSPHGDIVNDSHAEIVARRALLRFFYTEV---LNKQKCSNGIEGLRDDVFNNFLFELGPT 120
LS G +VND HAE+VARRA L F YT++ L+K+ R+D + L
Sbjct: 421 LSDQGLVVNDCHAEVVARRAFLHFLYTQLELHLSKR---------REDSERSIFVRLK-E 470
Query: 121 GKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSL 180
G YR RE HLY+S PCGDA L S + + S S V + G +S
Sbjct: 471 GGYRLRENILFHLYVSTSPCGDARLHSPYEITTDLHS----SKHLVRKFRGHLRTKIESG 526
Query: 181 QHIGRVQRKPGR---------GDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSIT 231
+ V R P G+ +++SC+DKIARWN +G+QGALLS+F++PVYL SI
Sbjct: 527 EGTVPV-RGPSAVQTWDGVLLGEQLITMSCTDKIARWNVLGLQGALLSHFVEPVYLQSIV 585
Query: 232 VGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETAS 291
VG +T HL R + R+ + +L + ++ N+P+ S +E
Sbjct: 586 VGSLHHTG-------HLARVMSHRMEGVG-QLPASYRHNRPLLSGVS-------DAEARQ 630
Query: 292 STLTCGYSICW-NKSGLHEVILGTTGRK 318
+ +S+ W S E+I TTGR+
Sbjct: 631 PGKSPPFSMNWVVGSADLEIINATTGRR 658
>sp|P78563|RED1_HUMAN Double-stranded RNA-specific editase 1 OS=Homo sapiens GN=ADARB1
PE=1 SV=1
Length = 741
Score = 135 bits (339), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 169/367 (46%), Gaps = 78/367 (21%)
Query: 4 ECWGDEVSKKVLWQYKSLPKK-GKPQGREVTVLAAFLISSPS--KDLEVVALGTGTKCIG 60
+ D VS+ VL ++ L P R VLA ++++ + KD +V+++ TGTKCI
Sbjct: 321 QVLADAVSRLVLGKFGDLTDNFSSPHARR-KVLAGVVMTTGTDVKDAKVISVSTGTKCIN 379
Query: 61 RSLLSPHGDIVNDSHAEIVARRALLRFFYTEV---LNKQKCSNGIEGLRDDVFNNFLFEL 117
+S G +ND HAEI++RR+LLRF YT++ LN +DD + +F+
Sbjct: 380 GEYMSDRGLALNDCHAEIISRRSLLRFLYTQLELYLNN----------KDDQKRS-IFQK 428
Query: 118 GPTGKYRFREGWQLHLYISQLPCGDASLSSCHSA---PRNFFSREGNSLSSVDELNGFKD 174
G +R +E Q HLYIS PCGDA + S H +++ G + L
Sbjct: 429 SERGGFRLKENVQFHLYISTSPCGDARIFSPHEPILEGSRSYTQAGVQWCNHGSLQPRPP 488
Query: 175 GIY-----DSLQHIGRVQ---RKPGR------------GDTTLSV--------------- 199
G+ + Q G + R P R G+ T+ V
Sbjct: 489 GLLSDPSTSTFQGAGTTEPADRHPNRKARGQLRTKIESGEGTIPVRSNASIQTWDGVLQG 548
Query: 200 ------SCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLY 253
SCSDKIARWN VG+QG+LLS F++P+Y SSI +G +HL R++Y
Sbjct: 549 ERLLTMSCSDKIARWNVVGIQGSLLSIFVEPIYFSSIILG-------SLYHGDHLSRAMY 601
Query: 254 DRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTLTCGYSICWN-KSGLHEVIL 312
RI + E+L + +NKP+ S ++E +S+ W EVI
Sbjct: 602 QRISNI-EDLPPLYTLNKPLLSGIS-------NAEARQPGKAPNFSVNWTVGDSAIEVIN 653
Query: 313 GTTGRKQ 319
TTG+ +
Sbjct: 654 ATTGKDE 660
>sp|Q9JI20|RED2_MOUSE Double-stranded RNA-specific editase B2 OS=Mus musculus GN=Adarb2
PE=2 SV=2
Length = 745
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 158/327 (48%), Gaps = 43/327 (13%)
Query: 6 WGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISS--PSKDLEVVALGTGTKCIGRSL 63
+ D VS+ V +++ L LA +++ +K +V+ L +GTKCI
Sbjct: 367 FADSVSQLVTQKFRELTVGLTSVYARHKTLAGIVMTKGLDTKQAQVIVLSSGTKCISGEH 426
Query: 64 LSPHGDIVNDSHAEIVARRALLRFFYTEV---LNKQKCSNGIEGLRDDVFNNFLFELGPT 120
+S G +VND HAEIVARRA L F Y+++ L+K + +D + L
Sbjct: 427 ISDQGLVVNDCHAEIVARRAFLHFLYSQLELHLSKHQ---------EDPERSIFIRL-KE 476
Query: 121 GKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDS- 179
G YR RE HLY+S PCGDA ++S P + +S V + G +S
Sbjct: 477 GGYRLRENILFHLYVSTSPCGDARVNS----PYEITTDLNSSKHIVRKFRGHLRTKIESG 532
Query: 180 -----LQHIGRVQRKPG--RGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITV 232
++ VQ G G+ +++SC+DKIA WN +G+QGALL +F++PVYL SI V
Sbjct: 533 EGTVPVRGPSAVQTWDGILLGEQLITMSCTDKIASWNVLGLQGALLCHFIEPVYLHSIIV 592
Query: 233 GRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASS 292
G +T HL R + R+ + +L + ++ N+P+ S H+E
Sbjct: 593 GSLHHTG-------HLARVMSHRMEGIG-QLPASYRQNRPLLSGVS-------HAEARQP 637
Query: 293 TLTCGYSICW-NKSGLHEVILGTTGRK 318
+ +S W S E+I TTG++
Sbjct: 638 GKSPHFSANWVVGSADLEIINATTGKR 664
>sp|P97616|RED2_RAT Double-stranded RNA-specific editase B2 OS=Rattus norvegicus
GN=Adarb2 PE=2 SV=1
Length = 746
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 154/324 (47%), Gaps = 37/324 (11%)
Query: 6 WGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISS--PSKDLEVVALGTGTKCIGRSL 63
+ D VS+ V +++ L LA +++ +K +V+ L +GTKCI
Sbjct: 368 FADSVSQLVTQKFRELTVGLTSVYARHKTLAGIVMTKGLDTKQAQVIVLSSGTKCISGEH 427
Query: 64 LSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKY 123
+S G +VND HAEIVARRA L F YT++ + S E +F G Y
Sbjct: 428 ISDQGLVVNDCHAEIVARRAFLHFLYTQL--ELHLSKHQEDPERSIFIRV-----KEGGY 480
Query: 124 RFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDS---- 179
R RE HLY+S PCGDA L+S P +S V + G +S
Sbjct: 481 RLRENILFHLYVSTSPCGDARLNS----PYEITIDLNSSKHIVRKFRGHLRTKIESGEGT 536
Query: 180 --LQHIGRVQRKPG--RGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRS 235
++ VQ G G+ +++SC+DKIA WN +G+QGALL +F++PVYL SI VG
Sbjct: 537 VPVRGPSAVQTWDGILLGEQLVTMSCTDKIASWNVLGLQGALLCHFIEPVYLHSIIVGSL 596
Query: 236 PNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTLT 295
+T HL R + R+ + +L + ++ N+P+ S ++E +
Sbjct: 597 HHTG-------HLARVMSHRMEGIG-QLPASYRQNRPLLSGVS-------NAEARQPGKS 641
Query: 296 CGYSICW-NKSGLHEVILGTTGRK 318
+S W S E+I TTG++
Sbjct: 642 PHFSANWVVGSADLEIINATTGKR 665
>sp|P55265|DSRAD_HUMAN Double-stranded RNA-specific adenosine deaminase OS=Homo sapiens
GN=ADAR PE=1 SV=4
Length = 1226
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 149/320 (46%), Gaps = 72/320 (22%)
Query: 34 VLAAFLISSPSKDLEVV-ALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEV 92
+LAA ++ S+D+ VV +LGTG +C+ LS G+ VND HAEI++RR +RF Y+E+
Sbjct: 868 ILAAIIMKKDSEDMGVVVSLGTGNRCVKGDSLSLKGETVNDCHAEIISRRGFIRFLYSEL 927
Query: 93 L--NKQKCSNGIEGLRDDVFNNFLFELGPTG-KYRFREGWQLHLYISQLPCGDASLSSCH 149
+ N Q + I FE G K + ++ HLYIS PCGD +L
Sbjct: 928 MKYNSQTAKDSI------------FEPAKGGEKLQIKKTVSFHLYISTAPCGDGALFDKS 975
Query: 150 SAPRNFFSREGNSLSSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSV---------- 199
+ R S E ++++ + G+++ K G+ T+ V
Sbjct: 976 CSDRAMESTESRHYP-----------VFENPKQ-GKLRTKVENGEGTIPVESSDIVPTWD 1023
Query: 200 -----------SCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHL 248
SCSDKI RWN +G+QGALL++FLQP+YL S+T+G + HL
Sbjct: 1024 GIRLGERLRTMSCSDKILRWNVLGLQGALLTHFLQPIYLKSVTLGY-------LFSQGHL 1076
Query: 249 KRSLYDRIL----PLSEELSSPFQVNKPIFLAASVPPEEFQHSETASST----LTCGYSI 300
R++ R+ + L PF VN P S+ + Q +T ++ L GY +
Sbjct: 1077 TRAICCRVTRDGSAFEDGLRHPFIVNHPKVGRVSIYDSKRQSGKTKETSVNWCLADGYDL 1136
Query: 301 CWNKSGLHEVILGTTGRKQG 320
E++ GT G G
Sbjct: 1137 --------EILDGTRGTVDG 1148
>sp|Q9NII1|ADAR_DROME Double-stranded RNA-specific editase Adar OS=Drosophila
melanogaster GN=Adar PE=1 SV=2
Length = 676
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 153/333 (45%), Gaps = 49/333 (14%)
Query: 4 ECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSK--DLEVVALGTGTKCIGR 61
+ D + + VL ++ + K + R VLA +++ + +V+++ TGTKC+
Sbjct: 300 QIHADTIGRLVLEKFMEVIKGQEAYSRR-KVLAGIVMTENMNFCEAKVISVSTGTKCVSG 358
Query: 62 SLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTG 121
+S +G ++NDSHAEIV+RR LL++ Y ++ + + + + F+
Sbjct: 359 EHMSVNGAVLNDSHAEIVSRRCLLKYLYAQLDLQCNQATAYQSI-------FVRNTDGQY 411
Query: 122 KYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSR-----EGNSLSSVDELNGF---- 172
Y+ + G HLYI+ PCGDA + S H G + ++ G
Sbjct: 412 PYKLKSGVHFHLYINTAPCGDARIFSPHENDTGVDKHPNRKARGQLRTKIESGEGTIPVK 471
Query: 173 -KDGI--YDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSS 229
DGI +D + +G L++SCSDKIARWN VG+QG+LLS ++PVYL S
Sbjct: 472 SSDGIQTWDGVL----------QGQRLLTMSCSDKIARWNIVGIQGSLLSSIIEPVYLHS 521
Query: 230 ITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKP-IFLAASVPPEEFQHSE 288
I +G EH+ R++ RI + L P+ +NKP + L S P
Sbjct: 522 IVLG-------SLLHPEHMYRAVCGRIEKSIQGLPPPYHLNKPRLALVTSAEPR------ 568
Query: 289 TASSTLTCGYSICWNKSGLH-EVILGTTGRKQG 320
+ + I W EV+ TGR G
Sbjct: 569 --NQAKAPNFGINWTIGDTELEVVNSLTGRTIG 599
>sp|Q99MU3|DSRAD_MOUSE Double-stranded RNA-specific adenosine deaminase OS=Mus musculus
GN=Adar PE=1 SV=2
Length = 1178
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 147/318 (46%), Gaps = 68/318 (21%)
Query: 34 VLAAFLISSPSKDLEVV-ALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEV 92
+LAA ++ +D+ VV +LGTG +C+ LS G+ VND HAEI++RR +RF Y+E+
Sbjct: 817 ILAAIIMKRDPEDMGVVVSLGTGNRCVKGDSLSLKGETVNDCHAEIISRRGFIRFLYSEL 876
Query: 93 LNKQKCSNGIEGLRDDVFNNFLFELGPTG-KYRFREGWQLHLYISQLPCGDASLSSCHSA 151
+ N +FEL G K + ++ HLYIS PCGD +L +
Sbjct: 877 MK----------YNHHTAKNSIFELARGGEKLQIKKTVSFHLYISTAPCGDGALFDKSCS 926
Query: 152 PRNFFSREGNSLSSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSV------------ 199
R S E ++++ + G+++ K G+ T+ V
Sbjct: 927 DRAVESTESRHYP-----------VFENPKQ-GKLRTKVENGEGTIPVESSDIVPTWDGI 974
Query: 200 ---------SCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKR 250
SCSDKI RWN +G+QGALL++FLQPVYL S+T+G + HL R
Sbjct: 975 RLGERLRTMSCSDKILRWNVLGLQGALLTHFLQPVYLKSVTLGY-------LFSQGHLTR 1027
Query: 251 SLYDRIL----PLSEELSSPFQVNKPIFLAASVPPEEFQHSETASST----LTCGYSICW 302
++ R+ + L PF VN P SV + Q +T ++ + GY +
Sbjct: 1028 AICCRVTRDGKAFEDGLRYPFIVNHPKVGRVSVYDSKRQSGKTKETSVNWCMADGYDL-- 1085
Query: 303 NKSGLHEVILGTTGRKQG 320
E++ GT G G
Sbjct: 1086 ------EILDGTRGTVDG 1097
>sp|P55266|DSRAD_RAT Double-stranded RNA-specific adenosine deaminase OS=Rattus norvegicus
GN=Adar PE=2 SV=1
Length = 1175
Score = 121 bits (303), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 146/318 (45%), Gaps = 68/318 (21%)
Query: 34 VLAAFLISSPSKDLEVV-ALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEV 92
+LAA ++ +D+ VV +LGTG +C+ LS G+ VND HAEI++RR +RF Y+E+
Sbjct: 814 ILAAIIMKRDPEDMGVVVSLGTGNRCVKGDSLSLKGETVNDCHAEIISRRGFIRFLYSEL 873
Query: 93 LNKQKCSNGIEGLRDDVFNNFLFELGPTG-KYRFREGWQLHLYISQLPCGDASLSSCHSA 151
+ N +FEL G K + ++ HLYIS PCGD + +
Sbjct: 874 MK----------YNHHTAKNSIFELARGGEKLQIKKTVSFHLYISTAPCGDGAHFDKSCS 923
Query: 152 PRNFFSREGNSLSSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSV------------ 199
R S E ++++ + G+++ K G+ T+ V
Sbjct: 924 DRAVESTESRHYP-----------VFENPKQ-GKLRTKVENGEGTIPVESSDIVPTWDGI 971
Query: 200 ---------SCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKR 250
SCSDKI RWN +G+QGALL++FLQPVYL S+T+G + HL R
Sbjct: 972 RLGERLRTMSCSDKILRWNVLGLQGALLTHFLQPVYLKSVTLGY-------LFSQGHLTR 1024
Query: 251 SLYDRIL----PLSEELSSPFQVNKPIFLAASVPPEEFQHSETASST----LTCGYSICW 302
++ R+ + L PF VN P SV + Q +T ++ L GY +
Sbjct: 1025 AICCRVTRDGNAFEDGLRYPFIVNHPKVGRVSVYDSKRQSGKTKETSVNWCLADGYDL-- 1082
Query: 303 NKSGLHEVILGTTGRKQG 320
E++ GT G G
Sbjct: 1083 ------EILDGTRGTVDG 1094
>sp|Q32NG0|ADAD1_XENLA Adenosine deaminase domain-containing protein 1 OS=Xenopus laevis
GN=adad1 PE=2 SV=1
Length = 586
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 143/289 (49%), Gaps = 35/289 (12%)
Query: 35 LAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLN 94
LAAF+I + EVVA+GTG G+SL S G +++DSHA +VARR+LLR+FY ++L
Sbjct: 242 LAAFVIEKGGQHWEVVAIGTGEFNYGQSLQS-DGRVLHDSHAMVVARRSLLRYFYRQLLL 300
Query: 95 KQKCSNGIEGLRDDVFNNFLFELGP-TGKYRFREGWQLHLYISQLPCGDASLSS--CHSA 151
+NG+ + +F P T + + LY++QLP G A + C S
Sbjct: 301 LYSGNNGM-------MDKSIFCTEPATNLLALKPNLNIFLYMNQLPKGAAQTNPQLCLS- 352
Query: 152 PRNFFSREGN---SLSSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIARW 208
P + + E N SL E Y G + S+S +DK+ RW
Sbjct: 353 PHSLSAHEANDKLSLHVSVEGKNIPASYYS-----GEIVHN------LYSMSSTDKLTRW 401
Query: 209 NAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQ 268
+GVQGALLS F+QPVY++SI +G + S+ LE +K+ + D L+ L +
Sbjct: 402 EVLGVQGALLSIFIQPVYINSIIIGNAA-CSDTRGLEIAVKQRIDD---ALTSRLPMFYL 457
Query: 269 VNKPIFLAASVPPEEFQHSETASSTLTCGYSICWNKSGLHEVILGTTGR 317
VN+P + V +++TA+ TL+ +S EV+ GR
Sbjct: 458 VNRPYM--SIVSSTHLTNNDTANKTLSLNWS---QGDACVEVVDAAIGR 501
>sp|Q28FE8|ADAT1_XENTR tRNA-specific adenosine deaminase 1 OS=Xenopus tropicalis GN=adat1
PE=2 SV=1
Length = 472
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 97/163 (59%), Gaps = 18/163 (11%)
Query: 183 IGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFL-QPVYLSSITVGRSPNTSED 241
+G ++ KPGRGD T+S+SCSDK+ARWN +G QGALL +FL QP+YLS++ VG+ P +
Sbjct: 253 VGVLRIKPGRGDRTMSMSCSDKMARWNVLGCQGALLMHFLQQPIYLSAVVVGKCPFS--- 309
Query: 242 FPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASST-------L 294
++ ++R+LY+R + L F++N+ + + + EFQH A + +
Sbjct: 310 ---QDAMERALYNRCHKVL-SLPCAFRLNRVQIIQSDL---EFQHGRHALTKKDATRKLV 362
Query: 295 TCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCK 337
CG ++ W+ H + + G +QGT+ K SP +S +CK
Sbjct: 363 PCGAAVSWSAVPHHPLDVTANGYRQGTTRKAIGSPQCRSRICK 405
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 16/145 (11%)
Query: 7 GDEVSKKVLWQYKS-LPKKGKPQ-GREVTVLAAFLISSPSKDLEV----VALGTGTKCIG 60
DE++ Y + LPK+G P RE T++AA + +D +V VA+GTGTKCIG
Sbjct: 9 ADEIAALSYGHYTTQLPKQGLPDPSREWTLMAAVIQIESVEDTKVIKKVVAMGTGTKCIG 68
Query: 61 RSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPT 120
++ L GD++ DSHAEI+A+R+ R+ ++ S + +D +F
Sbjct: 69 QAKLRKTGDVLQDSHAEIIAKRSFQRYLLHQL------SLAVSDTKDCLF----IPGTEK 118
Query: 121 GKYRFREGWQLHLYISQLPCGDASL 145
GK+ R + S PCGDAS+
Sbjct: 119 GKWMLRPEISFVFFTSHTPCGDASI 143
>sp|Q22618|ADR2_CAEEL Probable double-stranded RNA-specific adenosine deaminase
OS=Caenorhabditis elegans GN=adr-2 PE=2 SV=2
Length = 495
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 139/333 (41%), Gaps = 74/333 (22%)
Query: 29 GREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFF 88
G E + + FL + +L+++AL TG K + + G + D HAEI+ARR LLRF
Sbjct: 147 GFEKVIASVFL--KINGNLQIIALSTGNKGLRGDKIVNDGTALIDCHAEILARRGLLRFL 204
Query: 89 YTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSC 148
Y+EVL K S N +F G + G HL+I+ PCG A +
Sbjct: 205 YSEVL---KFSTEPP--------NSIFTKGKNA-LVLKPGISFHLFINTAPCGVARIDK- 251
Query: 149 HSAPRNFFSREGNSLSSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTL----------- 197
K G D LQ+ R++ K +G T+
Sbjct: 252 ----------------------KLKPGTSDDLQNSSRLRFKIDKGMGTVLGGASEFEAPQ 289
Query: 198 ------------SVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLE 245
++SCSDK+ R N +GVQGA+LS+F+ P+Y SSI V N
Sbjct: 290 TFDGIMMGERMRTMSCSDKLLRANVLGVQGAILSHFIDPIYYSSIAVAELNNA------- 342
Query: 246 EHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTLTCGYSICWN-K 304
+ L++++Y R +PF V V E S A ST++ S+ WN
Sbjct: 343 DRLRKAVYSRAATFKP--PAPFHVQDVEIGECQVEDTEQSTSAAARSTIS---SMNWNLA 397
Query: 305 SGLHEVILGTTGRKQGTSAKGALSPSTQSSLCK 337
G EV+ + G GA +T S LCK
Sbjct: 398 DGNTEVVRTSDGMVHDKDMSGA-DITTPSRLCK 429
>sp|Q5SUE7|ADAD1_MOUSE Adenosine deaminase domain-containing protein 1 OS=Mus musculus
GN=Adad1 PE=1 SV=1
Length = 619
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 128/250 (51%), Gaps = 43/250 (17%)
Query: 35 LAAFLISSPSKDLEVVALGTG----TKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYT 90
LAAF+I EVVA+GTG ++CI P+G +++D+HA + ARR+LLR+FY
Sbjct: 276 LAAFIIERAGHH-EVVAIGTGEYNYSQCI-----KPNGRVLHDTHAVVTARRSLLRYFYR 329
Query: 91 EVLNKQKCSNGIEGLRDDVF-----NNFLFELGPTGKYRFREGWQLHLYISQLPCGDASL 145
++L S + +F +N L ++ L+LY++QLP G A +
Sbjct: 330 QLL--LFYSKNPAMMEKSIFCTEPASNLL---------TLKQNINLYLYMNQLPKGSAQI 378
Query: 146 -SSCHSAPRNFFSREGNS-LSSVDELNG-FKDGIYDSLQHIGRVQRKPGRGDTTLSVSCS 202
S P + + E N LS + G +Y S + RV S+S S
Sbjct: 379 KSQLRLNPHSISAFEANEELSLHVAVEGKIYLTVYCSADGVNRVN----------SMSSS 428
Query: 203 DKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEE 262
DK+ RW +GVQGALLS+F+QPVY+SSI VG N ++ LE + + + D L+ +
Sbjct: 429 DKLTRWEVLGVQGALLSHFIQPVYISSILVGDG-NCNDTRGLEIAINQRVDDA---LTSK 484
Query: 263 LSSPFQVNKP 272
L + VN+P
Sbjct: 485 LPMFYLVNRP 494
>sp|Q3KR54|ADAD1_RAT Adenosine deaminase domain-containing protein 1 OS=Rattus
norvegicus GN=Adad1 PE=2 SV=1
Length = 619
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 128/250 (51%), Gaps = 43/250 (17%)
Query: 35 LAAFLISSPSKDLEVVALGTG----TKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYT 90
LAAF+I EVVA+GTG ++CI P+G +++D+HA + ARR+LLR+FY
Sbjct: 276 LAAFIIERGGHH-EVVAIGTGEYNYSQCI-----KPNGRVLHDTHAVVTARRSLLRYFYR 329
Query: 91 EVLNKQKCSNGIEGLRDDVF-----NNFLFELGPTGKYRFREGWQLHLYISQLPCGDASL 145
++L S + +F +N L ++ L+LY++QLP G A +
Sbjct: 330 QLL--LFYSKNPAMMEKSIFCTEPASNLL---------TLKQNINLYLYMNQLPKGSAQI 378
Query: 146 -SSCHSAPRNFFSREGNS-LSSVDELNG-FKDGIYDSLQHIGRVQRKPGRGDTTLSVSCS 202
S P + + E N LS + G +Y S + RV S+S S
Sbjct: 379 KSQLRLNPHSISAFEANEELSLHVAVEGKIYLTVYCSADGVNRVN----------SMSSS 428
Query: 203 DKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEE 262
DK+ RW +GVQGALLS+F+QPVY+SSI VG N ++ LE + + + D L+ +
Sbjct: 429 DKLTRWEVLGVQGALLSHFIQPVYISSILVGDG-NCNDTRGLEIAINQRVDDA---LTSK 484
Query: 263 LSSPFQVNKP 272
L + VN+P
Sbjct: 485 LPMFYLVNRP 494
>sp|Q96M93|ADAD1_HUMAN Adenosine deaminase domain-containing protein 1 OS=Homo sapiens
GN=ADAD1 PE=2 SV=1
Length = 576
Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 129/254 (50%), Gaps = 32/254 (12%)
Query: 35 LAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLN 94
LAAF+I + EVVA+GTG + + P G +++D+HA + ARR+LLR+FY ++L
Sbjct: 234 LAAFIIERAGQH-EVVAIGTGEYNYSQDI-KPDGRVLHDTHAVVTARRSLLRYFYRQLL- 290
Query: 95 KQKCSNGIEGLRDDVFNNFLFELGPTGKY-RFREGWQLHLYISQLPCGDASL-SSCHSAP 152
+ +F PT ++ + LY++QLP G A + S P
Sbjct: 291 ------LFYSKNPAMMEKSIFCTEPTSNLLTLKQNINICLYMNQLPKGSAQIKSQLRLNP 344
Query: 153 RNFFSREGNSLSSVDEL---NGFKDGIYDSLQHIGRVQRKPGRGDTTLS-VSCSDKIARW 208
+ + E N +EL + IY ++ P G +S +S SDK+ RW
Sbjct: 345 HSISAFEAN-----EELCLHVAVEGKIYLTVYC-------PKDGVNRISSMSSSDKLTRW 392
Query: 209 NAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQ 268
+GVQGALLS+F+QPVY+SSI +G N S+ LE +K+ + D L+ +L +
Sbjct: 393 EVLGVQGALLSHFIQPVYISSILIGDG-NCSDTRGLEIAIKQRVDD---ALTSKLPMFYL 448
Query: 269 VNKP-IFLAASVPP 281
VN+P I L S P
Sbjct: 449 VNRPHISLVPSAYP 462
>sp|Q5ZI16|ADAT1_CHICK tRNA-specific adenosine deaminase 1 OS=Gallus gallus GN=ADAT1 PE=2
SV=1
Length = 503
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 94/165 (56%), Gaps = 20/165 (12%)
Query: 183 IGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQ-PVYLSSITVGRSPNTSED 241
+G ++ KPGRGD T S+SCSDK+ARWN +G QGALL +FLQ PVYLS++ VG+ P +
Sbjct: 282 VGLLRVKPGRGDRTCSMSCSDKLARWNVLGCQGALLMHFLQYPVYLSAVIVGKCPYS--- 338
Query: 242 FPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETA---------SS 292
+E ++R++ +R +S L F + L + + +F+HS A
Sbjct: 339 ---QEAMQRAVIERCRHIS-LLPDGFLTQEVQLLQSDL---QFEHSRQAIQEGQTSSKRK 391
Query: 293 TLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCK 337
+ C +I W+ + + + G +QGT+ KG SP ++S +CK
Sbjct: 392 LVPCSAAISWSAVPEGPLDVTSDGFRQGTTKKGIGSPQSRSKICK 436
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 83/157 (52%), Gaps = 31/157 (19%)
Query: 7 GDEVSKKVLWQYKS-LPKKGKPQ-GREVTVLAAFL-ISSPSKDL------------EVVA 51
DE+++ Y+S LPK+GKP RE T LAA + + S + + EVVA
Sbjct: 4 ADEIAELCYEHYRSRLPKQGKPDPSREWTSLAAVVKVESAANEAGSAVLGTLQVAKEVVA 63
Query: 52 LGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEV---LNKQKCSNGIEGLRDD 108
LGTGTKCIG + + GD++NDSHAE+VA+R+ R+ ++ + Q+CS I G
Sbjct: 64 LGTGTKCIGLNKMRKTGDVLNDSHAEVVAKRSFQRYLLHQMRLATSYQQCSIFIPGTE-- 121
Query: 109 VFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASL 145
TGK++ + + S PCGDAS+
Sbjct: 122 -----------TGKWKLKPNIIFIFFCSHTPCGDASI 147
>sp|Q54XP3|ADAT1_DICDI tRNA-specific adenosine deaminase 1 OS=Dictyostelium discoideum
GN=adat1 PE=3 SV=1
Length = 545
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 85/162 (52%), Gaps = 30/162 (18%)
Query: 19 KSLPKKGKPQGREVTVLAAFLI----SSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDS 74
K L KKGKP E TVLA ++ +S + +V++LGTG +C+G+S LS GD++NDS
Sbjct: 23 KKLIKKGKPISGEWTVLATLVLVVENTSSYEIKQVLSLGTGNRCLGKSSLSNQGDVLNDS 82
Query: 75 HAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFEL---------------GP 119
HAEI+ +R+ +F Y E+LN L+ +N+ LF + G
Sbjct: 83 HAEIICKRSFQKFCYNEILN---------LLQSKYYNSILFNIEYHDSNNNNKDNDNNGS 133
Query: 120 TGKYRFREGWQLHLYISQLPCGDASL--SSCHSAPRNFFSRE 159
++G LH Y++Q PCGD S+ + P NF +E
Sbjct: 134 LPTISIKKGHSLHFYVNQTPCGDCSIFPFKKETQPENFIEKE 175
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 93/184 (50%), Gaps = 35/184 (19%)
Query: 181 QHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFL-QPVYLSSITVGRSPNTS 239
IG ++ KPGRGD T+S+SCSDKIARWN +G+QG+LLS+F+ + ++LSSIT+G N S
Sbjct: 295 HQIGVLRVKPGRGDPTVSMSCSDKIARWNVLGIQGSLLSHFIKEQIFLSSITIGDLFNHS 354
Query: 240 EDFPLEEHLKRSLYDRILP-----------------LSEELSSPFQVNKPI--------F 274
+ R L R+LP S F++N + F
Sbjct: 355 S-------IYRGLIGRLLPNPTTTTTETSSSSSSSSSSSNTIPNFKLNSDLEIFSTNIQF 407
Query: 275 LAASVPPEEFQHSETASSTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSS 334
+ + E Q + S++ S C+ HEV + G+K GT+ K + S +SS
Sbjct: 408 QFSKLLLESDQQNNNKSTSSGLAISFCY--PNQHEVTIAINGKKMGTNQKNFNAISQRSS 465
Query: 335 LCKF 338
+CKF
Sbjct: 466 ICKF 469
>sp|P53065|TAD1_YEAST tRNA-specific adenosine deaminase 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TAD1 PE=1 SV=1
Length = 400
Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 159/363 (43%), Gaps = 70/363 (19%)
Query: 7 GDEVSKKVLWQYKSLPKKGKP-----QGREVTVLAAFLISSPSKD-----LEVVALGTGT 56
G+E+S +V+ +Y L +P RE T+LA +++ ++D +E++++ TG
Sbjct: 24 GEEISTRVINEYSKLKSACRPIIRPSGIREWTILAG--VAAINRDGGANKIEILSIATGV 81
Query: 57 KCIGRS-LLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLF 115
K + S L G I++D HAEI+A LR T +LN+ + N G D F
Sbjct: 82 KALPDSELQRSEGKILHDCHAEILA----LRGANTVLLNRIQNYNPSSG---DKFIQHND 134
Query: 116 ELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDG 175
E+ ++ +E W+L LYIS+LPCGDAS+S + +N D+ +D
Sbjct: 135 EI--PARFNLKENWELALYISRLPCGDASMSFLNDNCKN------------DDFIKIEDS 180
Query: 176 IYDSLQHIGR-----------------VQRKPGRGDT--TLSVSCSDKIARWNAVGVQGA 216
D Q++ R V+ KPGR D+ TLS SCSDK+ V
Sbjct: 181 --DEFQYVDRSVKTILRGRLNFNRRNVVRTKPGRYDSNITLSKSCSDKLLMKQRSSVLNC 238
Query: 217 L-LSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFL 275
L F +PV+L I + PN ++ + HL++S + R+ L E+ FL
Sbjct: 239 LNYELFEKPVFLKYIVI---PNLEDE--TKHHLEQSFHTRLPNLDNEIK---------FL 284
Query: 276 AASVPPEEFQHSETASSTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSL 335
P + + E L C + + E IL T + L QS +
Sbjct: 285 NCLKPFYDDKLDEEDVPGLMCSVKLFMDDFSTEEAILNGVRNGFYTKSSKPLRKHCQSQV 344
Query: 336 CKF 338
+F
Sbjct: 345 SRF 347
>sp|O42912|TAD1_SCHPO tRNA-specific adenosine deaminase 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC16A3.06 PE=3 SV=1
Length = 388
Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 151/349 (43%), Gaps = 46/349 (13%)
Query: 7 GDEVSKKVLWQYKSLPKKGKP-----QGREVTVLAAFLISSPSK-DLEVVALGTGTKCIG 60
G+ ++ VL ++ L + GKP RE T LA +I + + V L TG KC
Sbjct: 13 GNLIALAVLNKFDELARHGKPIIRANGVREWTTLAGVVIQKKMENEFICVCLATGVKCTP 72
Query: 61 RSLLSPH--GDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELG 118
++ G +++D HAEI+A R R + +++ + +L E+
Sbjct: 73 AGIIKNEQLGSVLHDCHAEILALRCFNRLLLEHCI----------LIKESKKDTWLLEVA 122
Query: 119 PTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGN-SLSSVDELNGFKDGIY 177
GK+ +HLY+S+ PCGDAS+ S N ++ N ++ S + G D
Sbjct: 123 DNGKFTLNSNLLIHLYVSECPCGDASMELLASRLEN--NKPWNLTVDSEKLMRGRAD--- 177
Query: 178 DSLQHIGRVQRKPGRGD--TTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRS 235
+G V+ KPGR D + S SC+DK+A + + + S +P+YLS + + +
Sbjct: 178 --FGLLGIVRTKPGRPDAPVSWSKSCTDKLAAKQYLSILNSQTSLICEPIYLSCVVLYKK 235
Query: 236 PNTSEDFPLEEHLKRSL--YDRILPLSE--ELSSPFQVNKPIFLAASVPPEEFQHSE--- 288
++ + R+ + R PL+E E +P+ + L E F +S
Sbjct: 236 ------VIVKSAIDRAFGPFGRCAPLAEFGEKDNPYYFHPFTVLETD---ENFLYSRPLN 286
Query: 289 TASSTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCK 337
A T T + W + + G K GT AK +Q+ +C+
Sbjct: 287 QAEKTATSTNVLIWIGDKMQCTQVIHNGIKAGTKAKDV--EKSQTLICR 333
>sp|Q9JHI2|ADAT1_MOUSE tRNA-specific adenosine deaminase 1 OS=Mus musculus GN=Adat1 PE=2
SV=1
Length = 499
Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 179 SLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQ-PVYLSSITVGRSPN 237
+ +G ++ KPGRGD T S+SCSDK+ARWN +G QGALL +FL+ P+YLS++ +G+ P
Sbjct: 272 AYHQVGLLRVKPGRGDRTCSMSCSDKMARWNVLGCQGALLMHFLEKPIYLSAVVIGKCPY 331
Query: 238 TSEDFPLEEHLKRSLYDR-----ILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASS 292
+ +E ++R+L R +LP + + S + ++
Sbjct: 332 S------QEAMRRALTGRCEETLVLPRGFGVQELEIQQSGLLFEQSRCAVHRKRGDSPGR 385
Query: 293 TLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKF 338
+ CG +I W+ + + G QGT+ K SP +S + K
Sbjct: 386 LVPCGAAISWSAVPQQPLDVTANGFPQGTTKKEIGSPRARSRISKV 431
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 81/155 (52%), Gaps = 27/155 (17%)
Query: 7 GDEVSKKVLWQYK-SLPKKGKPQ-GREVTVLAAFL---------ISSPSKDL----EVVA 51
DE+++ Y LPK+GKP+ RE T+LAA + P K++ EVV+
Sbjct: 4 ADEIAQLCYAHYNVRLPKQGKPEPNREWTLLAAVVKIQASANQACDIPEKEVQVTKEVVS 63
Query: 52 LGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFN 111
+GTGTKCIG+S + GDI+NDSHAEI+ARR+ R+ ++ L +
Sbjct: 64 MGTGTKCIGQSKMRESGDILNDSHAEIIARRSFQRYLLHQL-----------HLAAVLKE 112
Query: 112 NFLFELGPT-GKYRFREGWQLHLYISQLPCGDASL 145
+ +F G G +R R + S PCGDAS+
Sbjct: 113 DSIFVPGTQRGLWRLRPDLSFVFFSSHTPCGDASI 147
>sp|Q9BUB4|ADAT1_HUMAN tRNA-specific adenosine deaminase 1 OS=Homo sapiens GN=ADAT1 PE=2
SV=1
Length = 502
Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 92/170 (54%), Gaps = 16/170 (9%)
Query: 179 SLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFL-QPVYLSSITVGRSPN 237
+ +G ++ KPGRGD T S+SCSDK+ARWN +G QGALL + L +P+YLS++ +G+ P
Sbjct: 277 AFHQVGLLRVKPGRGDRTRSMSCSDKMARWNVLGCQGALLMHLLEEPIYLSAVVIGKCPY 336
Query: 238 TSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPE------EFQHSETAS 291
+ +E ++R+L R +S L F V + L + + E + + +++
Sbjct: 337 S------QEAMQRALIGRCQNVS-ALPKGFGVQELKILQSDLLFEQSRSAVQAKRADSPG 389
Query: 292 STLTCGYSICWNKSGLHEVILGTTGRKQGTSAK--GALSPSTQSSLCKFF 339
+ CG +I W+ + + G QGT+ K G+L +Q S + F
Sbjct: 390 RLVPCGAAISWSAVPEQPLDVTANGFPQGTTKKTIGSLQARSQISKVELF 439
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 81/155 (52%), Gaps = 27/155 (17%)
Query: 7 GDEVSKKVLWQYK-SLPKKGKPQ-GREVTVLAAFL-ISSPSKDL------------EVVA 51
DE+++ Y LPKKGKP+ E T+LAA + I SP+ EVV+
Sbjct: 4 ADEIAQLCYEHYGIRLPKKGKPEPNHEWTLLAAVVKIQSPADKACDTPDKPVQVTKEVVS 63
Query: 52 LGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFN 111
+GTGTKCIG+S + +GDI+NDSHAE++ARR+ R+ ++ L +
Sbjct: 64 MGTGTKCIGQSKMRKNGDILNDSHAEVIARRSFQRYLLHQL-----------QLAATLKE 112
Query: 112 NFLFELGP-TGKYRFREGWQLHLYISQLPCGDASL 145
+ +F G G ++ R + S PCGDAS+
Sbjct: 113 DSIFVPGTQKGVWKLRRDLIFVFFSSHTPCGDASI 147
>sp|Q4R7N3|ADAT1_MACFA tRNA-specific adenosine deaminase 1 OS=Macaca fascicularis GN=ADAT1
PE=2 SV=1
Length = 502
Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 91/170 (53%), Gaps = 14/170 (8%)
Query: 179 SLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFL-QPVYLSSITVGRSPN 237
+ +G ++ KPGRGD T S+SCSDK+ARWN +G QGALL +FL +P+YLS++ +G+ P
Sbjct: 277 AFHQVGLLRVKPGRGDRTRSMSCSDKMARWNVLGCQGALLMHFLEEPIYLSAVVIGKCPY 336
Query: 238 TSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPE------EFQHSETAS 291
+ +E ++R+L R +S L F V + L + + E + + +++
Sbjct: 337 S------QEAMQRALTGRRQNVS-ALPKGFGVQELKILQSDLLFEQSRCAVQAKRADSPG 389
Query: 292 STLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKFFCL 341
+ CG +I W+ + + G QGT+ K S +S + K L
Sbjct: 390 RLVPCGAAISWSAVPEQPLDVTANGFPQGTTKKTIGSLQARSQISKVELL 439
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 73/140 (52%), Gaps = 26/140 (18%)
Query: 21 LPKKGKPQ-GREVTVLAAFL-ISSPSKD------------LEVVALGTGTKCIGRSLLSP 66
LPKKGKP+ E T+LAA + I SP+ EVV++GTGTKCIG+S +
Sbjct: 19 LPKKGKPEPNHEWTLLAAVVKIQSPADQDCDTPDKPAQVTKEVVSMGTGTKCIGQSKMRK 78
Query: 67 HGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGP-TGKYRF 125
GDI+NDSHAE++ARR R+ ++ L + + +F G G ++
Sbjct: 79 SGDILNDSHAEVIARRNFQRYLLHQL-----------QLAATLKEDSIFVPGTQKGLWKL 127
Query: 126 REGWQLHLYISQLPCGDASL 145
R + S PCGDAS+
Sbjct: 128 RRDLFFVFFSSHTPCGDASI 147
>sp|Q9D5P4|ADAD2_MOUSE Adenosine deaminase domain-containing protein 2 OS=Mus musculus
GN=Adad2 PE=2 SV=1
Length = 478
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 91/188 (48%), Gaps = 19/188 (10%)
Query: 48 EVVALGTGTK-CIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLR 106
E+VALGTG+ C G S G ++D H ++ARRALLRFF+ ++L + G +G
Sbjct: 153 ELVALGTGSSSCAGWLEFS--GRRLHDCHGLVIARRALLRFFFRQLLLVTQ--GGPKGQE 208
Query: 107 DDVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSV 166
V + GP + + G LHLY+S P G A H S + S
Sbjct: 209 RSVLTP---QPGPGPPFALKPGVFLHLYVSNTPKGAA-----HDIYLLLASEDSVLHSPA 260
Query: 167 DELNGFKDGIYDSLQHIGRVQRKPGRGDTTLS-VSCSDKIARWNAVGVQGALLSYFLQPV 225
L G + ++ P DT + +S SDK+ARW +G+ G LL++FL P+
Sbjct: 261 FRLQAHVCGQLKPVSYVA-----PALRDTHVGCLSASDKLARWAILGLGGGLLAHFLPPL 315
Query: 226 YLSSITVG 233
Y +S+ +
Sbjct: 316 YATSLVLA 323
>sp|Q8NCV1|ADAD2_HUMAN Adenosine deaminase domain-containing protein 2 OS=Homo sapiens
GN=ADAD2 PE=2 SV=1
Length = 583
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 131/299 (43%), Gaps = 36/299 (12%)
Query: 48 EVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRD 107
++VALGTG+ C L G ++D H ++ARRALLRF + ++L + G +G
Sbjct: 258 KLVALGTGSSCCA-GWLEFSGQQLHDCHGLVIARRALLRFLFRQLLLATQ--GGPKGKEQ 314
Query: 108 DVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFF----SREGNSL 163
V + GP + + LHLYIS P G A R+ + S G
Sbjct: 315 SVLAP---QPGPGPPFTLKPRVFLHLYISNTPKGAA---------RDIYLPPTSEGGLPH 362
Query: 164 SSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLS-VSCSDKIARWNAVGVQGALLSYFL 222
S L G + ++ P DT + +S SDK+ARW +G+ GALL++ +
Sbjct: 363 SPPMRLQAHVLGQLKPVCYVA-----PSLCDTHVGCLSASDKLARWAVLGLGGALLAHLV 417
Query: 223 QPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPE 282
P+Y +S+ + S + H R D + L L P+ V + L A P
Sbjct: 418 SPLYSTSLILADSCHDPPTLSRAIH-TRPCLDSV--LGPCLPPPY-VRTALHLFAGPP-- 471
Query: 283 EFQHSETASSTLTCGYSICWN--KSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKFF 339
SE T G S+ W+ G+ EV+ TGR + +A G S ++S + F
Sbjct: 472 -VAPSEPTPDTCR-GLSLNWSLGDPGI-EVVDVATGRVKANAALGPPSRLCKASFLRAF 527
>sp|Q95JV3|ADAD2_MACFA Adenosine deaminase domain-containing protein 2 OS=Macaca
fascicularis GN=ADAD2 PE=2 SV=2
Length = 580
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 132/301 (43%), Gaps = 40/301 (13%)
Query: 48 EVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRD 107
++VALGTG+ C L G ++D H ++ARRALLRF + ++L + G +G
Sbjct: 255 KLVALGTGSSCCA-GWLEFSGQQLHDCHGLVIARRALLRFLFRQLLLATQ--GGAKGKEQ 311
Query: 108 DVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFF----SREGNSL 163
V + GP + + LHLYIS P G A R+ + S G
Sbjct: 312 SVLAP---QPGPGPPFTLKPRVFLHLYISNTPKGAA---------RDIYLPPTSEGGLPH 359
Query: 164 SSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLS-VSCSDKIARWNAVGVQGALLSYFL 222
S L G + ++ P DT + +S SDK+ARW +G+ GALL++ +
Sbjct: 360 SPPMRLQAHVLGQLKPVCYVA-----PSLCDTHVGCLSASDKLARWAVLGLGGALLAHLV 414
Query: 223 QPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPF-QVNKPIFLAASVPP 281
P+Y +S+ + S + H + L + P L P+ + +F V P
Sbjct: 415 SPLYSTSLILADSCHDPPTLSRAIHTRPCLDSVLGPC---LPPPYVRTALHLFSGPPVAP 471
Query: 282 EEFQHSETASSTLTC-GYSICWN--KSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKF 338
E + TC G S+ W+ G+ EV+ TGR + +A G S ++S +
Sbjct: 472 SE-------PTPDTCHGLSLNWSLGDPGI-EVVDVATGRVKANAALGPPSRLCKASFLRA 523
Query: 339 F 339
F
Sbjct: 524 F 524
>sp|A6QQA5|CA074_BOVIN UPF0739 protein C1orf74 homolog OS=Bos taurus PE=2 SV=1
Length = 263
Score = 35.0 bits (79), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 162 SLSSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSVSCSDKIAR-WNAVGVQGALLSY 220
++ S+D+L FK + + + H+ +QR D +L+VSCS + WN V G LL Y
Sbjct: 119 AVCSLDQLQDFKALVVEIITHLQGLQR-----DRSLAVSCSRLCSSAWNLCTVFGILLGY 173
>sp|B0Y7U1|FAEB2_ASPFC Probable feruloyl esterase B-2 OS=Neosartorya fumigata (strain
CEA10 / CBS 144.89 / FGSC A1163) GN=faeB-2 PE=3 SV=1
Length = 526
Score = 34.7 bits (78), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 72/181 (39%), Gaps = 23/181 (12%)
Query: 75 HAEIVARRALLRFFYTEVLNKQ---KCSNG-IEGLR--DDVFNNFLFELGPTGKYRFRE- 127
H +V + L + FY E +K CS G +G + N+F + + F
Sbjct: 160 HTGVVVGKQLTKMFYKEGFDKSYYLGCSTGGRQGFKSIQKYPNDFDGVVAGAPAFNFVNL 219
Query: 128 -GWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSLQ----H 182
W +H Y ++ S + +P ++ + DE++G KDGI +
Sbjct: 220 ISWSIHFY----SITGSNTSDTYLSPESWKVVHDEIVRQCDEIDGAKDGIIEDTDLCQPV 275
Query: 183 IGRVQRKPGRGDTTLSVSCSDKIARWNAV----GVQGALLSYFLQP---VYLSSITVGRS 235
I + KPG D T ++ + N + GV G LL +QP ++ SS+
Sbjct: 276 IETIICKPGASDKTNCITGAQAKTVRNVLSPFYGVNGTLLYPRMQPGSELFASSVVYNGQ 335
Query: 236 P 236
P
Sbjct: 336 P 336
>sp|Q4WMR0|FAEB2_ASPFU Probable feruloyl esterase B-2 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=faeB-2
PE=3 SV=1
Length = 526
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 72/181 (39%), Gaps = 23/181 (12%)
Query: 75 HAEIVARRALLRFFYTEVLNKQ---KCSNG-IEGLR--DDVFNNFLFELGPTGKYRFRE- 127
H +V + L + FY E +K CS G +G + N+F + + F
Sbjct: 160 HTGVVVGKQLTKMFYKEGFDKSYYLGCSTGGRQGFKSIQKYPNDFDGVVAGAPAFNFVNL 219
Query: 128 -GWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSLQ----H 182
W +H Y ++ S + +P ++ + DE++G KDGI +
Sbjct: 220 ISWSIHFY----SITGSNTSDTYLSPESWKVVHDEIVRQCDEIDGAKDGIIEDTDLCQPV 275
Query: 183 IGRVQRKPGRGDTTLSVSCSDKIARWNAV----GVQGALLSYFLQP---VYLSSITVGRS 235
I + KPG D T ++ + N + GV G LL +QP ++ SS+
Sbjct: 276 IETIICKPGASDKTNCITGAQAKTVRNVLSPFYGVNGNLLYPRMQPGSELFASSVVYNGQ 335
Query: 236 P 236
P
Sbjct: 336 P 336
>sp|A6VQX0|SECA_ACTSZ Protein translocase subunit SecA OS=Actinobacillus succinogenes
(strain ATCC 55618 / 130Z) GN=secA PE=3 SV=1
Length = 915
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 60 GRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGP 119
GR L + D+ ND I +R +L L+ S I+ +R+DVFN+ + E P
Sbjct: 641 GRKNLLQYDDVANDQRHAIYEQRNVL-------LDNDDISETIDAIREDVFNSVIDEYIP 693
Query: 120 TGKYRFREGWQL 131
E W++
Sbjct: 694 PQS--LEEQWKI 703
>sp|Q0CI21|FAEB2_ASPTN Probable feruloyl esterase B-2 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=faeB-2 PE=3 SV=2
Length = 527
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 64/166 (38%), Gaps = 21/166 (12%)
Query: 75 HAEIVARRALLRFFYTEVLNKQ---KCSN-GIEGLR--DDVFNNFLFELGPTGKYRFRE- 127
H +V + L + FY E NK CS G +G + N+F + + F
Sbjct: 161 HTGVVIGKKLTKMFYEEGFNKSYYLGCSTGGRQGFKSVQKYPNDFDGVVAGAPAFNFANL 220
Query: 128 -GWQLHLY-ISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIYDSLQHIGR 185
W H Y I+ P D LS P + + D+++G KDGI +
Sbjct: 221 ISWSAHFYPITGPPGSDTYLS-----PAMWKVAHDEIIRQCDQIDGAKDGIIEDPSLCNP 275
Query: 186 VQR----KPG-RGDTTLSVSCSDKIAR--WNAVGVQGALLSYFLQP 224
+ KPG D LS + + + + GV G LL +QP
Sbjct: 276 IMETIICKPGASSDNCLSAAQAKTVREVLYPLYGVNGTLLYPRMQP 321
>sp|Q9H6U6|BCAS3_HUMAN Breast carcinoma-amplified sequence 3 OS=Homo sapiens GN=BCAS3 PE=1
SV=3
Length = 928
Score = 33.1 bits (74), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 215 GALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLK-RSLYDRI-LPLSEELSSPFQVNKP 272
G L+ + ++P LS+ +P S+D PLE R+ + + P EL PF N P
Sbjct: 620 GTLVEHMMEPRPLST-----APKISDDTPLEMMTSPRASWTLVRTPQWNELQPPFNANHP 674
Query: 273 IFLAA 277
+ LAA
Sbjct: 675 LLLAA 679
>sp|Q9VIS1|CDGAP_DROME GTPase-activating protein CdGAPr OS=Drosophila melanogaster
GN=CdGAPr PE=1 SV=2
Length = 1843
Score = 32.0 bits (71), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 244 LEEHLKRSLYDRI---LPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTLTCGYSI 300
L+E L R +YDR L EEL++ + A + E F S+ AS +LTCG +
Sbjct: 212 LDEMLHRCVYDRKISGLRNMEELAAELPSESDVEYAVAKYLERF--SKIASDSLTCGTIL 269
Query: 301 CW----NKSGLHEVILGTTGRKQGTSAKGA 326
W NK + G T R T A GA
Sbjct: 270 TWLQLDNKGRRLPLADGETQRTINTPAVGA 299
>sp|E1C656|HACE1_CHICK E3 ubiquitin-protein ligase HACE1 OS=Gallus gallus GN=HACE1 PE=2
SV=1
Length = 942
Score = 31.6 bits (70), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 11/84 (13%)
Query: 149 HSAPRNFFSREGNSLSSVDELNGFKDGIYDSLQHIGRVQRKPGRGDTTLSVSCS------ 202
+SA N + EG + +NG + ++D +QH+ V + G T L V+C
Sbjct: 120 YSADVNICNNEGLTAIHWLAVNGRTELLHDLVQHVSNVDVEDAMGQTALHVACQNGHKTT 179
Query: 203 -----DKIARWNAVGVQGALLSYF 221
D A N V GA YF
Sbjct: 180 VQCLLDSGADINRPNVSGATPLYF 203
>sp|O83149|RP54_TREPA RNA polymerase sigma-54 factor OS=Treponema pallidum (strain
Nichols) GN=rpoN PE=3 SV=1
Length = 475
Score = 31.6 bits (70), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 20/166 (12%)
Query: 113 FLFELGPTG--KYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFS----REGNSLSSV 166
F+ ++ TG FR + +H S+ + +L +C + S RE L
Sbjct: 278 FVTQINCTGIPTVVFRNDYCMH---SKAAEKNHALKACMHDALSLVSMLSYRERTLLDIA 334
Query: 167 DELNGFKDGIYDSLQHIGRVQRKPGRGD-----TTLSVSCSDKIAR--WNAVGVQGALLS 219
+ ++ G +D G + P R T LSVS +I R W G Q L
Sbjct: 335 KTIVHYQCGFFDH----GPAKLTPLRMTDVAHRTGLSVSTVSRIVRDKWLQYGSQHFSLR 390
Query: 220 YFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSS 265
YF P LS+ + +++P H K S+ RI L +E+ +
Sbjct: 391 YFFSPRVLSTEEYRDRSSLGQNYPSSPHSKVSVKYRISRLIQEVRT 436
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,907,804
Number of Sequences: 539616
Number of extensions: 5592810
Number of successful extensions: 11583
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 11483
Number of HSP's gapped (non-prelim): 52
length of query: 341
length of database: 191,569,459
effective HSP length: 118
effective length of query: 223
effective length of database: 127,894,771
effective search space: 28520533933
effective search space used: 28520533933
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)