Query 019424
Match_columns 341
No_of_seqs 136 out of 414
Neff 6.3
Searched_HMMs 13730
Date Mon Mar 25 15:52:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019424.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/019424hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2g84a1 c.97.1.2 (A:1-189) Put 67.0 4.7 0.00034 33.2 6.1 41 35-86 48-88 (189)
2 d1wwra1 c.97.1.2 (A:1-151) tRN 50.4 25 0.0018 27.2 7.6 15 131-145 73-87 (151)
3 d1p6oa_ c.97.1.2 (A:) Cytosine 44.4 14 0.001 29.2 5.0 15 131-145 80-94 (156)
4 d1wkqa_ c.97.1.2 (A:) Guanine 40.5 7.5 0.00054 30.9 2.7 15 74-88 54-68 (158)
5 d1qr0a1 d.150.1.1 (A:1-101) 4' 26.8 20 0.0015 25.7 3.0 46 79-137 45-90 (101)
6 d2cqea1 g.66.1.1 (A:458-513) Z 16.4 46 0.0034 21.7 2.6 28 54-81 8-35 (56)
7 d1bdsa_ g.9.1.1 (A:) BDs-I def 14.5 20 0.0015 21.5 0.4 7 188-194 8-14 (43)
8 d1nbja_ g.3.3.2 (A:) Cycloviol 13.8 9.4 0.00069 21.6 -1.3 9 198-206 17-25 (30)
9 d1mxaa1 d.130.1.1 (A:1-102) S- 9.1 75 0.0055 23.0 2.2 19 4-22 16-34 (102)
10 d1lmra_ g.3.6.3 (A:) ADO1 {Ass 7.5 97 0.0071 17.7 1.6 17 52-68 6-22 (35)
No 1
>d2g84a1 c.97.1.2 (A:1-189) Putative deaminase NE0047 {Nitrosomonas europaea [TaxId: 915]}
Probab=66.97 E-value=4.7 Score=33.21 Aligned_cols=41 Identities=27% Similarity=0.235 Sum_probs=22.4
Q ss_pred EEEEEEeeCCCCeEEEEEeeCCCcccCCcCCCCCCcccchHHHHHHHHHHHH
Q 019424 35 LAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLR 86 (341)
Q Consensus 35 LA~iVl~~~~~~~~vVslgTGtKc~~~~~l~~~G~~lhD~HAEVLARR~f~r 86 (341)
++|+|+.. ++-+||+-|.-. . ..+|+... |||++|.|-.-+
T Consensus 48 ~GaviV~~--~~g~Iia~g~N~-~------~~~~dpt~--HAEi~AI~~A~~ 88 (189)
T d2g84a1 48 FAAAVFER--DSGLLIAAGTNR-V------VPGRCSAA--HAEILALSLAQA 88 (189)
T ss_dssp CEEEEEET--TTCBEEEEEECC-T------TTTTCTTC--CHHHHHHHHHHH
T ss_pred EEEEEEEC--CCCEEEEEEcCC-c------CcCCCCcc--cHHHHHHHHHHH
Confidence 45555532 345888876533 1 11222211 999999876533
No 2
>d1wwra1 c.97.1.2 (A:1-151) tRNA adenosine deaminase TadA {Aquifex aeolicus [TaxId: 63363]}
Probab=50.40 E-value=25 Score=27.19 Aligned_cols=15 Identities=33% Similarity=0.560 Sum_probs=11.4
Q ss_pred EEEEeccCCCCcccc
Q 019424 131 LHLYISQLPCGDASL 145 (341)
Q Consensus 131 lhlYiS~~PCGdAsi 145 (341)
.-||+|-.||--++.
T Consensus 73 ~tlY~TlEPC~mC~~ 87 (151)
T d1wwra1 73 CELYVTLEPCIMCSY 87 (151)
T ss_dssp EEEEESSCCBHHHHH
T ss_pred cEeeecccCCcHHHH
Confidence 358999999965544
No 3
>d1p6oa_ c.97.1.2 (A:) Cytosine deaminase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=44.39 E-value=14 Score=29.19 Aligned_cols=15 Identities=27% Similarity=0.472 Sum_probs=11.2
Q ss_pred EEEEeccCCCCcccc
Q 019424 131 LHLYISQLPCGDASL 145 (341)
Q Consensus 131 lhlYiS~~PCGdAsi 145 (341)
.-||+|-.||-.++.
T Consensus 80 ~tlyvTlEPC~mC~~ 94 (156)
T d1p6oa_ 80 TTLYTTLSPCDMCTG 94 (156)
T ss_dssp EEEEEEECCCHHHHH
T ss_pred eEEEeeccCCHHHHH
Confidence 358999999965544
No 4
>d1wkqa_ c.97.1.2 (A:) Guanine deaminase GuaD {Bacillus subtilis [TaxId: 1423]}
Probab=40.49 E-value=7.5 Score=30.87 Aligned_cols=15 Identities=33% Similarity=0.503 Sum_probs=11.4
Q ss_pred hHHHHHHHHHHHHHH
Q 019424 74 SHAEIVARRALLRFF 88 (341)
Q Consensus 74 ~HAEVLARR~f~r~L 88 (341)
.|||++|.|...+.|
T Consensus 54 ~HAE~~ai~~a~~~~ 68 (158)
T d1wkqa_ 54 AHAEVTAIRKACKVL 68 (158)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHhc
Confidence 599999998764443
No 5
>d1qr0a1 d.150.1.1 (A:1-101) 4'-Phosphopantetheinyl transferase SFP {Bacillus subtilis [TaxId: 1423]}
Probab=26.81 E-value=20 Score=25.71 Aligned_cols=46 Identities=17% Similarity=0.113 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCccccccCCCCCeeEeeCCCCceeeeCCcEEEEEecc
Q 019424 79 VARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYRFREGWQLHLYISQ 137 (341)
Q Consensus 79 LARR~f~r~Ly~el~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~Lk~~v~lhlYiS~ 137 (341)
|+-|.|+|+++.+.... ...++.|..++.||-.|...-.+||=+|+
T Consensus 45 l~~r~llr~~l~~~~~~-------------~p~~i~~~~~~~GKP~l~~~~~i~FNiSH 90 (101)
T d1qr0a1 45 LLGDVLVRSVISRQYQL-------------DKSDIRFSTQEYGKPCIPDLPDAHFNISH 90 (101)
T ss_dssp HHHHHHHHHHHHHHTTC-------------CGGGCCCEECTTSCEECTTCTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHhCC-------------CccceeEEeCCCCCccccCCCCcEEEecc
Confidence 45567778877654332 11345567777787666544446666665
No 6
>d2cqea1 g.66.1.1 (A:458-513) Zinc finger CCCH domain-containing protein C19orf7 (KIAA1064) {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.42 E-value=46 Score=21.75 Aligned_cols=28 Identities=18% Similarity=0.254 Sum_probs=20.3
Q ss_pred eCCCcccCCcCCCCCCcccchHHHHHHH
Q 019424 54 TGTKCIGRSLLSPHGDIVNDSHAEIVAR 81 (341)
Q Consensus 54 TGtKc~~~~~l~~~G~~lhD~HAEVLAR 81 (341)
||+||..++.=...=.-|.|---|+|+.
T Consensus 8 tg~kCy~gd~C~FSH~pLt~~t~~lL~K 35 (56)
T d2cqea1 8 TTGNCINGDDCMFSHDPLTEETRELLDK 35 (56)
T ss_dssp HTSCCSSCTTCSSBCCCCCHHHHHHHHH
T ss_pred cCCcccCCCcccccCCccCHHHHHHHHH
Confidence 8999998876544336888877777664
No 7
>d1bdsa_ g.9.1.1 (A:) BDs-I defensin {Sea anemone (Anemonia sulcata) [TaxId: 6108]}
Probab=14.54 E-value=20 Score=21.54 Aligned_cols=7 Identities=86% Similarity=1.540 Sum_probs=5.7
Q ss_pred eCCCCCC
Q 019424 188 RKPGRGD 194 (341)
Q Consensus 188 tKPGrgd 194 (341)
-||||||
T Consensus 8 gkpgrgd 14 (43)
T d1bdsa_ 8 GKPGRGD 14 (43)
T ss_dssp SCCSCCE
T ss_pred CCCCCCc
Confidence 4899988
No 8
>d1nbja_ g.3.3.2 (A:) Cycloviolacin O1 {Plant (Viola odorata) [TaxId: 97441]}
Probab=13.78 E-value=9.4 Score=21.60 Aligned_cols=9 Identities=33% Similarity=0.918 Sum_probs=6.5
Q ss_pred ccchhhHHH
Q 019424 198 SVSCSDKIA 206 (341)
Q Consensus 198 smSCSDKl~ 206 (341)
--|||||.+
T Consensus 17 gc~c~~kvc 25 (30)
T d1nbja_ 17 GCSCSNRVC 25 (30)
T ss_dssp TCEEETTEE
T ss_pred cccccCcee
Confidence 348999864
No 9
>d1mxaa1 d.130.1.1 (A:1-102) S-adenosylmethionine synthetase {Escherichia coli [TaxId: 562]}
Probab=9.13 E-value=75 Score=23.01 Aligned_cols=19 Identities=21% Similarity=0.134 Sum_probs=16.1
Q ss_pred cchHHHHHHHHHHHHhcCC
Q 019424 4 ECWGDEVSKKVLWQYKSLP 22 (341)
Q Consensus 4 ~~~ad~ia~~v~~~y~~L~ 22 (341)
+.++|.|++++++.|-+.-
T Consensus 16 DKicDqISDaIlD~~L~~D 34 (102)
T d1mxaa1 16 DKIADQISDAVLDAILEQD 34 (102)
T ss_dssp HHHHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHHHHhC
Confidence 4689999999999997654
No 10
>d1lmra_ g.3.6.3 (A:) ADO1 {Assassin bug (Agriosphodrus dohrni) [TaxId: 184613]}
Probab=7.49 E-value=97 Score=17.65 Aligned_cols=17 Identities=35% Similarity=0.710 Sum_probs=11.6
Q ss_pred EeeCCCcccCCcCCCCC
Q 019424 52 LGTGTKCIGRSLLSPHG 68 (341)
Q Consensus 52 lgTGtKc~~~~~l~~~G 68 (341)
|--|+||++..+-.-.|
T Consensus 6 lprgskclgenkqcc~~ 22 (35)
T d1lmra_ 6 LPRGSKCLGENKQCCKG 22 (35)
T ss_dssp CCTTCCCSSCCCCCCTT
T ss_pred ccccccccccchhhccC
Confidence 45689999977654444
Done!