BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019429
(341 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255545042|ref|XP_002513582.1| polypyrimidine tract binding protein, putative [Ricinus communis]
gi|223547490|gb|EEF48985.1| polypyrimidine tract binding protein, putative [Ricinus communis]
Length = 447
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 264/320 (82%), Positives = 278/320 (86%), Gaps = 9/320 (2%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKITTFEKTAGFQALVQFSD ETASSAKNALDGR+IPRYLLPE++GPCTLRI
Sbjct: 133 VFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRNIPRYLLPEHIGPCTLRI 192
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
TYSAHTDLSVKFQSHRSRDYTNP LPVAPSAID SG +VGLDGKKLEPESNVLLASIEN
Sbjct: 193 TYSAHTDLSVKFQSHRSRDYTNPNLPVAPSAIDGSGMFTVGLDGKKLEPESNVLLASIEN 252
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG
Sbjct: 253 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 312
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQ 265
FCKLHISYSRH+DLSIKVNNDRSRDYT+P+ MVN QPSILGQQPVP VG A+ Y+GAQ
Sbjct: 313 FCKLHISYSRHSDLSIKVNNDRSRDYTIPNPAMVNPQPSILGQQPVPTVGPPAHPYSGAQ 372
Query: 266 FAPPPPEQPMMHQPTAAGWGAVPPASQSM-PMMGNHPYMPPGSMP--MGPGMMQMHMPGQ 322
FA P E P+M QP+A AVP SM P M NHPY P G+MP MGPGMMQ MPG
Sbjct: 373 FA-PHTEHPVMPQPSAGWTAAVPAGPHSMPPQMNNHPYFPSGAMPPQMGPGMMQ--MPGH 429
Query: 323 SGMQHHHGA-MPPPRPDHMQ 341
+G+Q GA MPP RP MQ
Sbjct: 430 TGIQ--QGAPMPPYRPGQMQ 447
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 71/112 (63%), Gaps = 7/112 (6%)
Query: 137 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL +IE V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK A
Sbjct: 111 NVLLVTIEGADARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNA 170
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS 241
L+G I G C L I+YS HTDLS+K + RSRDYT P+ P+ S
Sbjct: 171 LDGRNIPRYLLPEHIGPCTLRITYSAHTDLSVKFQSHRSRDYTNPNLPVAPS 222
>gi|118488039|gb|ABK95840.1| unknown [Populus trichocarpa]
Length = 442
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 252/319 (78%), Positives = 268/319 (84%), Gaps = 12/319 (3%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKITTFEKTAGFQALVQFSD ETASSAKNALDGR+IP YLLPE++GPCTLRI
Sbjct: 133 VFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRNIPSYLLPEHLGPCTLRI 192
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
TYSAHTDLSVKFQSHRSRDYTN LPVAPSAIDA+G SVGLDGKKLEPESNVLLASIEN
Sbjct: 193 TYSAHTDLSVKFQSHRSRDYTNANLPVAPSAIDANGMFSVGLDGKKLEPESNVLLASIEN 252
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVTLDVLHMVFS+FGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG
Sbjct: 253 MQYAVTLDVLHMVFSSFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 312
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQ 265
FCKLH+SYSRH+DLSIKVNNDRSRDYT+P+T M+N QPSILGQQPV G A+ Y GAQ
Sbjct: 313 FCKLHLSYSRHSDLSIKVNNDRSRDYTIPNTVMMNPQPSILGQQPVATHGPPAHTYPGAQ 372
Query: 266 FAPPPPEQPMMHQPTAAGWGAVPPASQSMP-MMGNHPYMPPGSMP--MGPGMMQMHMPGQ 322
MM QP+A PP SMP M N+PY+PPG+MP MG GMMQ MP
Sbjct: 373 ------HHQMMPQPSAGWATGGPPVPHSMPAQMNNNPYLPPGTMPPQMGHGMMQ--MPNH 424
Query: 323 SGMQHHHGAMPPPRPDHMQ 341
G+ H AMPP RP HMQ
Sbjct: 425 GGLP-HAPAMPPYRPGHMQ 442
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 69/109 (63%), Gaps = 7/109 (6%)
Query: 137 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL +IE V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK A
Sbjct: 111 NVLLVTIEGADARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNA 170
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
L+G I G C L I+YS HTDLS+K + RSRDYT + P+
Sbjct: 171 LDGRNIPSYLLPEHLGPCTLRITYSAHTDLSVKFQSHRSRDYTNANLPV 219
>gi|224135279|ref|XP_002322027.1| predicted protein [Populus trichocarpa]
gi|222869023|gb|EEF06154.1| predicted protein [Populus trichocarpa]
Length = 447
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/319 (77%), Positives = 264/319 (82%), Gaps = 7/319 (2%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKITTFEK FQALVQFSD ETASSAKNALDGR+IP YLLPE++GPCTLRI
Sbjct: 133 VFSAFGFVHKITTFEKMDRFQALVQFSDVETASSAKNALDGRNIPSYLLPEHLGPCTLRI 192
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
YS HTDLSVKFQSHRSRDYTNP LPVA SAIDA+G S+GLDGKKLEPESNVLLASIEN
Sbjct: 193 AYSGHTDLSVKFQSHRSRDYTNPNLPVAQSAIDANGMFSMGLDGKKLEPESNVLLASIEN 252
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVTLDVLHMVFS+FGPVQKIAMFDKN GLQALIQYPDVQTAVVAKEALEGHCIYDGG
Sbjct: 253 MQYAVTLDVLHMVFSSFGPVQKIAMFDKNSGLQALIQYPDVQTAVVAKEALEGHCIYDGG 312
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQ 265
FCKLH+SYSRH DLSIKVNNDRSRDYT+P+ MVN QPSILGQQPV G ++ Y GAQ
Sbjct: 313 FCKLHLSYSRHNDLSIKVNNDRSRDYTIPNNVMVNPQPSILGQQPVATHGPPSHLYTGAQ 372
Query: 266 FAPPPPEQPMMHQPTAAGWGAVPPASQSMP-MMGNHPYMPPGSMP--MGPGMMQMHMPGQ 322
FA P E M+ QP++ PP SMP M N+PY+PPG+MP MG GMMQ MP
Sbjct: 373 FA-PTTEHSMIPQPSSGWATGFPPVPNSMPGQMNNNPYLPPGTMPPQMGHGMMQ--MPSH 429
Query: 323 SGMQHHHGAMPPPRPDHMQ 341
G H H AMPP RP HMQ
Sbjct: 430 GGPPHTH-AMPPYRPYHMQ 447
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 71/112 (63%), Gaps = 7/112 (6%)
Query: 137 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL +IE V++DVLH+VFSAFG V KI F+K QAL+Q+ DV+TA AK A
Sbjct: 111 NVLLITIEGADARLVSIDVLHLVFSAFGFVHKITTFEKMDRFQALVQFSDVETASSAKNA 170
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS 241
L+G I G C L I+YS HTDLS+K + RSRDYT P+ P+ S
Sbjct: 171 LDGRNIPSYLLPEHLGPCTLRIAYSGHTDLSVKFQSHRSRDYTNPNLPVAQS 222
>gi|359490453|ref|XP_003634092.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Vitis vinifera]
Length = 446
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 240/317 (75%), Positives = 270/317 (85%), Gaps = 14/317 (4%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKITTFEKTAGFQALVQFSD+ETAS+AKNALDGRSIPRYLLPE++GPCTLRI
Sbjct: 133 VFSAFGFVHKITTFEKTAGFQALVQFSDSETASAAKNALDGRSIPRYLLPEHLGPCTLRI 192
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
T+SAHTDLSVKFQSHRSRDYTNPYLPVA SAID SGQ S+G DG+K+EPESNVLLASIEN
Sbjct: 193 TFSAHTDLSVKFQSHRSRDYTNPYLPVASSAIDGSGQFSMGFDGRKVEPESNVLLASIEN 252
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVTLDVLHMVFSAFGP+QKIAMFDKNGG+QALIQYPDVQTA+VAKEALEGHCIYDGG
Sbjct: 253 MQYAVTLDVLHMVFSAFGPIQKIAMFDKNGGVQALIQYPDVQTAIVAKEALEGHCIYDGG 312
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQ 265
FCKLHISYSRHTDLSIKVNNDRSRDYT +P+++SQPS+LGQQPVP+ G + +Q+ GAQ
Sbjct: 313 FCKLHISYSRHTDLSIKVNNDRSRDYT---SPVLSSQPSVLGQQPVPIPGPSTHQFEGAQ 369
Query: 266 FAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMG--------NHPYMPPGSMPMGPGMMQM 317
+A P +QP++HQP+ AGW A+ + P NHPYMPPG+MP P M
Sbjct: 370 YA-SPSDQPVIHQPS-AGWATSAAAAGAPPPPPQSMPMQQHNHPYMPPGTMPPQPVPGMM 427
Query: 318 HMPGQSGMQHHHGAMPP 334
M Q+G+ AMPP
Sbjct: 428 PMQTQTGLP-QSAAMPP 443
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 73/119 (61%), Gaps = 7/119 (5%)
Query: 137 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL +IE V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK A
Sbjct: 111 NVLLVTIEGADARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDSETASAAKNA 170
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
L+G I G C L I++S HTDLS+K + RSRDYT P P+ +S GQ
Sbjct: 171 LDGRSIPRYLLPEHLGPCTLRITFSAHTDLSVKFQSHRSRDYTNPYLPVASSAIDGSGQ 229
>gi|147804914|emb|CAN66869.1| hypothetical protein VITISV_013673 [Vitis vinifera]
Length = 755
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 240/317 (75%), Positives = 268/317 (84%), Gaps = 14/317 (4%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKITTFEKTAGFQALVQFSD+ETAS+AKNALDGRSIPRYLLPE++GPCTLRI
Sbjct: 442 VFSAFGFVHKITTFEKTAGFQALVQFSDSETASAAKNALDGRSIPRYLLPEHLGPCTLRI 501
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
T+SAHTDLSVKFQSHRSRDYTNPYLPVA SAID SGQ S+G DG+K+EPESNVLLASIEN
Sbjct: 502 TFSAHTDLSVKFQSHRSRDYTNPYLPVASSAIDGSGQFSMGFDGRKVEPESNVLLASIEN 561
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVTLDVLHMVFSAFGP+QKIAMFDKNGG+QALIQYPDVQTA+VAKEALEGHCIYDGG
Sbjct: 562 MQYAVTLDVLHMVFSAFGPIQKIAMFDKNGGVQALIQYPDVQTAIVAKEALEGHCIYDGG 621
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQ 265
FCKLHISYSRHTDLSIKVNNDRSRDYT +P+++SQPS+LGQQPVP+ G + +Q+ GAQ
Sbjct: 622 FCKLHISYSRHTDLSIKVNNDRSRDYT---SPVLSSQPSVLGQQPVPIPGPSTHQFEGAQ 678
Query: 266 FAPPPPEQPMMHQPTAAGWGA--------VPPASQSMPMMGNHPYMPPGSMPMGPGMMQM 317
+A P +QP++HQP+ AGW PP NHPYMPPG+MP P M
Sbjct: 679 YA-SPSDQPVIHQPS-AGWATSAAAAGAPPPPPQSMPMQQHNHPYMPPGTMPPQPVPGMM 736
Query: 318 HMPGQSGMQHHHGAMPP 334
M Q+G+ AMPP
Sbjct: 737 PMQTQTGLP-QSAAMPP 752
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 73/119 (61%), Gaps = 7/119 (5%)
Query: 137 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL +IE V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK A
Sbjct: 420 NVLLVTIEGADARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDSETASAAKNA 479
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
L+G I G C L I++S HTDLS+K + RSRDYT P P+ +S GQ
Sbjct: 480 LDGRSIPRYLLPEHLGPCTLRITFSAHTDLSVKFQSHRSRDYTNPYLPVASSAIDGSGQ 538
>gi|356509289|ref|XP_003523383.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Glycine max]
Length = 433
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/294 (80%), Positives = 252/294 (85%), Gaps = 21/294 (7%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKITTFEKTAGFQALVQFSD ETA+SAK+ALDGRSIPRYLLPE+MGPCTLRI
Sbjct: 133 VFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYLLPEHMGPCTLRI 192
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
TYS H+DLSVKFQSHRSRDYTNPYLPVAPSA++ SGQ VGLDGK+LE ESNVLLASIEN
Sbjct: 193 TYSGHSDLSVKFQSHRSRDYTNPYLPVAPSAVEGSGQAMVGLDGKRLEAESNVLLASIEN 252
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQ+PD QTAVVAKEALEGHCIYDGG
Sbjct: 253 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQFPDTQTAVVAKEALEGHCIYDGG 312
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQ 265
FCKLHISYSRHTDLSIKVNNDRSRDYT+P+TP VN QPSILGQQ VPM+G YNG+Q
Sbjct: 313 FCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPAVNVQPSILGQQSVPMMGPPQQPYNGSQ 372
Query: 266 FAPPPPEQPMMHQPTAAGWGAVPPAS--QSMPM-MGNHPYMPPGSMP--MGPGM 314
AGWG PPA+ QSMPM M N+ YMP G+MP M PGM
Sbjct: 373 ----------------AGWGTAPPATTVQSMPMQMHNNVYMPSGTMPQQMAPGM 410
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 76/126 (60%), Gaps = 7/126 (5%)
Query: 137 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL +IE V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK+A
Sbjct: 111 NVLLVTIEGADARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDA 170
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQ 249
L+G I G C L I+YS H+DLS+K + RSRDYT P P+ S GQ
Sbjct: 171 LDGRSIPRYLLPEHMGPCTLRITYSGHSDLSVKFQSHRSRDYTNPYLPVAPSAVEGSGQA 230
Query: 250 PVPMVG 255
V + G
Sbjct: 231 MVGLDG 236
>gi|357463843|ref|XP_003602203.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355491251|gb|AES72454.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 828
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 239/311 (76%), Positives = 263/311 (84%), Gaps = 6/311 (1%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKITTFEKTAGFQALVQFSD ETA+SAK+ALDGRSIPRYLL E++GPCTL+I
Sbjct: 457 VFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYLLSEHVGPCTLKI 516
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
TYS H+DL+VKFQSHRSRDYTNPYLPVA SAI+ GQ+ +GLDGK+LE ESNVLLASIEN
Sbjct: 517 TYSGHSDLTVKFQSHRSRDYTNPYLPVAQSAIEGGGQVMIGLDGKRLEAESNVLLASIEN 576
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVTLDVLHMVFSAFGP+QKIAMFDKNGGLQALIQYPD QTAVVAKEALEGHCIYDGG
Sbjct: 577 MQYAVTLDVLHMVFSAFGPIQKIAMFDKNGGLQALIQYPDTQTAVVAKEALEGHCIYDGG 636
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQ 265
FCKLH+SYSRHTDLSIKVNNDRSRDYT+P P+VN+QPSILG QPVPM A QYNG+Q
Sbjct: 637 FCKLHLSYSRHTDLSIKVNNDRSRDYTIPMIPVVNTQPSILG-QPVPMTVPPAQQYNGSQ 695
Query: 266 FAPPPPEQPMMHQPTAAGWG-AVPPASQSMPM-MGNHPYMPPGSMPMGPGMMQMHMPGQS 323
+ P P M + AGWG +P +QSMP+ M N+ YMP G+MP G G MQM PG
Sbjct: 696 YT--PISDPAMIPQSQAGWGTTLPTVAQSMPLQMHNNIYMPAGNMPPGNGPMQMQ-PGNG 752
Query: 324 GMQHHHGAMPP 334
MQ G MPP
Sbjct: 753 PMQMPPGNMPP 763
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 71/112 (63%), Gaps = 7/112 (6%)
Query: 137 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL ++E V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK+A
Sbjct: 435 NVLLVTVEGEDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDA 494
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS 241
L+G I G C L I+YS H+DL++K + RSRDYT P P+ S
Sbjct: 495 LDGRSIPRYLLSEHVGPCTLKITYSGHSDLTVKFQSHRSRDYTNPYLPVAQS 546
>gi|356516021|ref|XP_003526695.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Glycine max]
Length = 432
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 233/293 (79%), Positives = 253/293 (86%), Gaps = 20/293 (6%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKITTFEKTAGFQALVQFSD ETA+SAK+ALDGRSIPRYLLPE++GPCTLRI
Sbjct: 133 VFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYLLPEHVGPCTLRI 192
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
TYS H+DLSVKFQSHRSRDYTNPYLPVAPSA++ SGQ VGLDGK+LE ESNVLLASIEN
Sbjct: 193 TYSGHSDLSVKFQSHRSRDYTNPYLPVAPSAVEGSGQAMVGLDGKRLETESNVLLASIEN 252
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD QTAVVAKEALEGHCIYDGG
Sbjct: 253 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDTQTAVVAKEALEGHCIYDGG 312
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQ 265
FCKLH+SYSRHTDLSIKVNNDRSRDYT+P+TP+VN+QPSI GQQ V M+G + + G+Q
Sbjct: 313 FCKLHLSYSRHTDLSIKVNNDRSRDYTIPNTPIVNAQPSIFGQQSVSMMGPSQQPFYGSQ 372
Query: 266 FAPPPPEQPMMHQPTAAGWGAVPPAS-QSMPM-MGNHPYMPPGSMP--MGPGM 314
AGWG PPA+ QSMPM M N+ YMPPG+MP M PGM
Sbjct: 373 ----------------AGWGTAPPAAVQSMPMQMHNNVYMPPGTMPQQMAPGM 409
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 76/126 (60%), Gaps = 7/126 (5%)
Query: 137 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL +IE V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK+A
Sbjct: 111 NVLLVTIEGADARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDA 170
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQ 249
L+G I G C L I+YS H+DLS+K + RSRDYT P P+ S GQ
Sbjct: 171 LDGRSIPRYLLPEHVGPCTLRITYSGHSDLSVKFQSHRSRDYTNPYLPVAPSAVEGSGQA 230
Query: 250 PVPMVG 255
V + G
Sbjct: 231 MVGLDG 236
>gi|449456492|ref|XP_004145983.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
[Cucumis sativus]
Length = 776
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 248/328 (75%), Positives = 272/328 (82%), Gaps = 19/328 (5%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKITTFEKTAGFQALVQFSD ETASSAKNALDGRSIPRYLLP+++GPC+LRI
Sbjct: 456 VFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLPDHVGPCSLRI 515
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
TYSAHTDL+VKFQSHRSRDYTNPYLPVAPSAID SGQ +VGLDGKKLEPESNVLLASIEN
Sbjct: 516 TYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLEPESNVLLASIEN 575
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVTL+VLHMVFSAFGPVQKIAMFDKNGG+QALIQYPDVQTAVVAKEALEGHCIYDGG
Sbjct: 576 MQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAKEALEGHCIYDGG 635
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPST-PMVNSQPSILGQQPVP---------MVG 255
FCKLHISYSRHTDLSIKVNNDRSRDYT+P+ PMVNSQP ++GQ P M+G
Sbjct: 636 FCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQGPGQGQGQQPPHQMMG 695
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPAS--QSMPMMGNHPYMPPGSMPMGPG 313
+ +QYNG Q+ P +QP + P ++GWG+ PA+ SMPM N YMP G+MP G
Sbjct: 696 PSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAATYSSMPMH-NPGYMPSGTMPPQHG 754
Query: 314 MMQMHMPGQSGMQHHHGAMPPPRPDHMQ 341
M MP SG+ H PP RPDH Q
Sbjct: 755 M----MPSPSGL--HQTPPPPYRPDHRQ 776
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 75/126 (59%), Gaps = 7/126 (5%)
Query: 137 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL +IE V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK A
Sbjct: 434 NVLLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNA 493
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQ 249
L+G I G C L I+YS HTDL++K + RSRDYT P P+ S GQ
Sbjct: 494 LDGRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQF 553
Query: 250 PVPMVG 255
V + G
Sbjct: 554 TVGLDG 559
>gi|363807178|ref|NP_001242348.1| uncharacterized protein LOC100810102 [Glycine max]
gi|255645249|gb|ACU23122.1| unknown [Glycine max]
Length = 428
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 234/293 (79%), Positives = 254/293 (86%), Gaps = 8/293 (2%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKITTFEKTAGFQALVQFSD ETA+SAK+ALDGRSIPRYLLPE+MGPC+L+I
Sbjct: 133 VFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYLLPEHMGPCSLKI 192
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
TYS H+DLSVKFQSHRSRDYTNPYLPVA SA++ SGQ VGLDGK+LE ESNVLLASIEN
Sbjct: 193 TYSGHSDLSVKFQSHRSRDYTNPYLPVAQSAMEGSGQPMVGLDGKRLEAESNVLLASIEN 252
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD+QTAVVAKEALEGHCIYDGG
Sbjct: 253 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDIQTAVVAKEALEGHCIYDGG 312
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPST--PMVNSQPSILGQQPVPMVGATANQYNG 263
FCKLHISYSRH+DLSIKVNNDRSRDYT+P+ P+VN+QPSILGQ PVPM G QYNG
Sbjct: 313 FCKLHISYSRHSDLSIKVNNDRSRDYTIPNVPPPVVNAQPSILGQHPVPMTGPPPQQYNG 372
Query: 264 AQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMP--MGPGM 314
AQ+A EQ +M Q + AGWG P SQSM M N+PY P +P PGM
Sbjct: 373 AQYA-SVTEQTLMPQ-SQAGWGTAP--SQSMLQMHNNPYTPSAMVPPQTAPGM 421
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 77/126 (61%), Gaps = 10/126 (7%)
Query: 137 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL +IE V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK+A
Sbjct: 111 NVLLVTIEGEDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDA 170
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQ 249
L+G I G C L I+YS H+DLS+K + RSRDYT P P+ S GQ
Sbjct: 171 LDGRSIPRYLLPEHMGPCSLKITYSGHSDLSVKFQSHRSRDYTNPYLPVAQSAMEGSGQ- 229
Query: 250 PVPMVG 255
PMVG
Sbjct: 230 --PMVG 233
>gi|356546193|ref|XP_003541515.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Glycine max]
Length = 428
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/293 (78%), Positives = 249/293 (84%), Gaps = 8/293 (2%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKITTFEKTAGFQALVQFSD ETA+SAK+ALDGRSIPRYLLPE++GPC L+I
Sbjct: 133 VFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYLLPEHIGPCGLKI 192
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
TYS H+DLSVKFQSHRSRDYTNPYLPVA SA++ SGQ VGLDGK+LE ESNVLLASIEN
Sbjct: 193 TYSGHSDLSVKFQSHRSRDYTNPYLPVAQSAMEGSGQPMVGLDGKRLEAESNVLLASIEN 252
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQY VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD+QTAVVAKE LEGHCIYDGG
Sbjct: 253 MQYTVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDIQTAVVAKETLEGHCIYDGG 312
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPST--PMVNSQPSILGQQPVPMVGATANQYNG 263
FCKLHISYSRHTDLSIKVNN+RSRDYT+P+ P+VN+QPSILGQ PVPM G YNG
Sbjct: 313 FCKLHISYSRHTDLSIKVNNERSRDYTIPNVPPPVVNAQPSILGQHPVPMTGPPPQHYNG 372
Query: 264 AQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMP--MGPGM 314
AQ+AP + M H + AGWG PP QSM M NHPY P +P PGM
Sbjct: 373 AQYAPVTEQTLMSH--SQAGWGTGPP--QSMQQMHNHPYTPSAMVPPQTTPGM 421
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 77/126 (61%), Gaps = 10/126 (7%)
Query: 137 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL +IE V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK+A
Sbjct: 111 NVLLVTIEGEDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDA 170
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQ 249
L+G I G C L I+YS H+DLS+K + RSRDYT P P+ S GQ
Sbjct: 171 LDGRSIPRYLLPEHIGPCGLKITYSGHSDLSVKFQSHRSRDYTNPYLPVAQSAMEGSGQ- 229
Query: 250 PVPMVG 255
PMVG
Sbjct: 230 --PMVG 233
>gi|449522938|ref|XP_004168482.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Cucumis sativus]
Length = 457
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 248/332 (74%), Positives = 272/332 (81%), Gaps = 23/332 (6%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKITTFEKTAGFQALVQFSD ETASSAKNALDGRSIPRYLLP+++GPC+LRI
Sbjct: 133 VFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLPDHVGPCSLRI 192
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQ----LSVGLDGKKLEPESNVLLA 141
TYSAHTDL+VKFQSHRSRDYTNPYLPVAPSAID SGQ +VGLDGKKLEPESNVLLA
Sbjct: 193 TYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSSLQFTVGLDGKKLEPESNVLLA 252
Query: 142 SIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCI 201
SIENMQYAVTL+VLHMVFSAFGPVQKIAMFDKNGG+QALIQYPDVQTAVVAKEALEGHCI
Sbjct: 253 SIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAKEALEGHCI 312
Query: 202 YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPST-PMVNSQPSILGQQPVP-------- 252
YDGGFCKLHISYSRHTDLSIKVNNDRSRDYT+P+ PMVNSQP ++GQ P
Sbjct: 313 YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQGPGQGQGQQPPH 372
Query: 253 -MVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPAS--QSMPMMGNHPYMPPGSMP 309
M+G + +QYNG Q+ P +QP + P ++GWG+ PA+ SMPM N YMP G+MP
Sbjct: 373 QMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAATYSSMPMH-NPGYMPSGTMP 431
Query: 310 MGPGMMQMHMPGQSGMQHHHGAMPPPRPDHMQ 341
GM MP SG+ H PP RPDH Q
Sbjct: 432 PQHGM----MPSPSGL--HQTPPPPYRPDHRQ 457
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 72/119 (60%), Gaps = 7/119 (5%)
Query: 137 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL +IE V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK A
Sbjct: 111 NVLLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNA 170
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
L+G I G C L I+YS HTDL++K + RSRDYT P P+ S GQ
Sbjct: 171 LDGRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQ 229
>gi|302143674|emb|CBI22535.3| unnamed protein product [Vitis vinifera]
Length = 1311
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 206/235 (87%), Positives = 225/235 (95%), Gaps = 3/235 (1%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKITTFEKTAGFQALVQFSD+ETAS+AKNALDGRSIPRYLLPE++GPCTLRI
Sbjct: 133 VFSAFGFVHKITTFEKTAGFQALVQFSDSETASAAKNALDGRSIPRYLLPEHLGPCTLRI 192
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
T+SAHTDLSVKFQSHRSRDYTNPYLPVA SAID SGQ S+G DG+K+EPESNVLLASIEN
Sbjct: 193 TFSAHTDLSVKFQSHRSRDYTNPYLPVASSAIDGSGQFSMGFDGRKVEPESNVLLASIEN 252
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVTLDVLHMVFSAFGP+QKIAMFDKNGG+QALIQYPDVQTA+VAKEALEGHCIYDGG
Sbjct: 253 MQYAVTLDVLHMVFSAFGPIQKIAMFDKNGGVQALIQYPDVQTAIVAKEALEGHCIYDGG 312
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQ 260
FCKLHISYSRHTDLSIKVNNDRSRDYT +P+++SQPS+LGQQPVP+ G + +Q
Sbjct: 313 FCKLHISYSRHTDLSIKVNNDRSRDYT---SPVLSSQPSVLGQQPVPIPGPSTHQ 364
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 73/119 (61%), Gaps = 7/119 (5%)
Query: 137 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL +IE V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK A
Sbjct: 111 NVLLVTIEGADARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDSETASAAKNA 170
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
L+G I G C L I++S HTDLS+K + RSRDYT P P+ +S GQ
Sbjct: 171 LDGRSIPRYLLPEHLGPCTLRITFSAHTDLSVKFQSHRSRDYTNPYLPVASSAIDGSGQ 229
>gi|224118178|ref|XP_002317750.1| predicted protein [Populus trichocarpa]
gi|222858423|gb|EEE95970.1| predicted protein [Populus trichocarpa]
Length = 350
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 208/226 (92%), Positives = 218/226 (96%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKITTFEKTAGFQALVQFSD ETASSAKNALDGR+IP YLLPE++GPCTLRI
Sbjct: 124 VFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRNIPSYLLPEHLGPCTLRI 183
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
TYSAHTDLSVKFQSHRSRDYTN LPVAPSAIDA+G SVGLDGKKLEPESNVLLASIEN
Sbjct: 184 TYSAHTDLSVKFQSHRSRDYTNANLPVAPSAIDANGMFSVGLDGKKLEPESNVLLASIEN 243
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVTLDVLHMVFS+FGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG
Sbjct: 244 MQYAVTLDVLHMVFSSFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 303
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPV 251
FCKLH+SYSRH+DLSIKVNNDRSRDYT+P+T M+N QPSILGQQPV
Sbjct: 304 FCKLHLSYSRHSDLSIKVNNDRSRDYTIPNTVMMNPQPSILGQQPV 349
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 69/109 (63%), Gaps = 7/109 (6%)
Query: 137 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL +IE V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK A
Sbjct: 102 NVLLVTIEGADARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNA 161
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
L+G I G C L I+YS HTDLS+K + RSRDYT + P+
Sbjct: 162 LDGRNIPSYLLPEHLGPCTLRITYSAHTDLSVKFQSHRSRDYTNANLPV 210
>gi|145334809|ref|NP_001078750.1| polypyrimidine tract-binding protein 2 [Arabidopsis thaliana]
gi|110737620|dbj|BAF00751.1| polypyrimidine tract-binding RNA transport protein-like
[Arabidopsis thaliana]
gi|332008936|gb|AED96319.1| polypyrimidine tract-binding protein 2 [Arabidopsis thaliana]
Length = 329
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 196/225 (87%), Positives = 216/225 (96%)
Query: 8 LSRKYLQWQLSASGERAHVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGR 67
+SR+YLQWQ +A GERAHVFSAFGFVHKITTFEKTAG+QALVQF+D ETA++AK ALDGR
Sbjct: 15 MSRQYLQWQPNALGERAHVFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGR 74
Query: 68 SIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGL 127
SIPRYLL E +G C+L+ITYSAHTDL+VKFQSHRSRDYTNPYLPVAPSAID++GQ++VG+
Sbjct: 75 SIPRYLLAETVGQCSLKITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDSTGQVAVGV 134
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
DGKK+EPESNVLLASIENMQYAVTLDVLHMVF+AFG VQKIAMFDKNGG+QALIQY DVQ
Sbjct: 135 DGKKMEPESNVLLASIENMQYAVTLDVLHMVFAAFGEVQKIAMFDKNGGVQALIQYSDVQ 194
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 232
TAVVAKEALEGHCIYDGGFCKLHI+YSRHTDLSIKVNNDRSRDYT
Sbjct: 195 TAVVAKEALEGHCIYDGGFCKLHITYSRHTDLSIKVNNDRSRDYT 239
>gi|297796143|ref|XP_002865956.1| hypothetical protein ARALYDRAFT_495390 [Arabidopsis lyrata subsp.
lyrata]
gi|297311791|gb|EFH42215.1| hypothetical protein ARALYDRAFT_495390 [Arabidopsis lyrata subsp.
lyrata]
Length = 426
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/213 (88%), Positives = 206/213 (96%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKITTFEKTAG+QALVQFSD ETA+SAKNALDGRSIPRYLL E +G C+L+I
Sbjct: 133 VFSAFGFVHKITTFEKTAGYQALVQFSDEETATSAKNALDGRSIPRYLLAEQVGQCSLKI 192
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
TYSAHTDL+VKFQSHRSRDYTNPYLP+APSAID++GQ++VG+DGKK+EPESNVLLASIEN
Sbjct: 193 TYSAHTDLTVKFQSHRSRDYTNPYLPIAPSAIDSTGQVAVGVDGKKMEPESNVLLASIEN 252
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVTLDVLHMVF+AFG VQKIAMFDKNGGLQALIQY DVQTAVVAKEALEGHCIYDGG
Sbjct: 253 MQYAVTLDVLHMVFAAFGDVQKIAMFDKNGGLQALIQYKDVQTAVVAKEALEGHCIYDGG 312
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
FCKLHI+YSRHTDLSIKVNNDRSRDYT+P+ P+
Sbjct: 313 FCKLHITYSRHTDLSIKVNNDRSRDYTMPNPPV 345
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 75/126 (59%), Gaps = 7/126 (5%)
Query: 137 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL ++E V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK A
Sbjct: 111 NVLLVTVEGEDARMVSIDVLHLVFSAFGFVHKITTFEKTAGYQALVQFSDEETATSAKNA 170
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQ 249
L+G I G C L I+YS HTDL++K + RSRDYT P P+ S GQ
Sbjct: 171 LDGRSIPRYLLAEQVGQCSLKITYSAHTDLTVKFQSHRSRDYTNPYLPIAPSAIDSTGQV 230
Query: 250 PVPMVG 255
V + G
Sbjct: 231 AVGVDG 236
>gi|15238677|ref|NP_200130.1| polypyrimidine tract-binding protein 2 [Arabidopsis thaliana]
gi|75333813|sp|Q9FGL9.1|PTBP2_ARATH RecName: Full=Polypyrimidine tract-binding protein homolog 2
gi|9757999|dbj|BAB08421.1| polypyrimidine tract-binding RNA transport protein-like
[Arabidopsis thaliana]
gi|53749130|gb|AAU90050.1| At5g53180 [Arabidopsis thaliana]
gi|55733737|gb|AAV59265.1| At5g53180 [Arabidopsis thaliana]
gi|332008935|gb|AED96318.1| polypyrimidine tract-binding protein 2 [Arabidopsis thaliana]
Length = 429
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 183/207 (88%), Positives = 200/207 (96%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKITTFEKTAG+QALVQF+D ETA++AK ALDGRSIPRYLL E +G C+L+I
Sbjct: 133 VFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGRSIPRYLLAETVGQCSLKI 192
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
TYSAHTDL+VKFQSHRSRDYTNPYLPVAPSAID++GQ++VG+DGKK+EPESNVLLASIEN
Sbjct: 193 TYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDSTGQVAVGVDGKKMEPESNVLLASIEN 252
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVTLDVLHMVF+AFG VQKIAMFDKNGG+QALIQY DVQTAVVAKEALEGHCIYDGG
Sbjct: 253 MQYAVTLDVLHMVFAAFGEVQKIAMFDKNGGVQALIQYSDVQTAVVAKEALEGHCIYDGG 312
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYT 232
FCKLHI+YSRHTDLSIKVNNDRSRDYT
Sbjct: 313 FCKLHITYSRHTDLSIKVNNDRSRDYT 339
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 76/126 (60%), Gaps = 7/126 (5%)
Query: 137 NVLLASIE-NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL +IE + V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK A
Sbjct: 111 NVLLVTIEGDDARMVSIDVLHLVFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLA 170
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQ 249
L+G I G C L I+YS HTDL++K + RSRDYT P P+ S GQ
Sbjct: 171 LDGRSIPRYLLAETVGQCSLKITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDSTGQV 230
Query: 250 PVPMVG 255
V + G
Sbjct: 231 AVGVDG 236
>gi|294463038|gb|ADE77057.1| unknown [Picea sitchensis]
Length = 528
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/264 (72%), Positives = 216/264 (81%), Gaps = 4/264 (1%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEK+AGFQALVQFSD TA+SAKNALDGRSIPRYLLPE++G C+LRI
Sbjct: 133 VFSAFGFVHKIATFEKSAGFQALVQFSDPNTATSAKNALDGRSIPRYLLPEHVGLCSLRI 192
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
T+SAH DL+VKFQSHRSRDYTNPYLPVAPSAID +GQ +G DGK+ EPESNVLLASIEN
Sbjct: 193 TFSAHNDLNVKFQSHRSRDYTNPYLPVAPSAIDGTGQFGIGPDGKRREPESNVLLASIEN 252
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVTLDVL VF+AFG VQKIA+F+KN G QALIQYPDV TAV AKEALEGHCIYDGG
Sbjct: 253 MQYAVTLDVLRSVFTAFGTVQKIAIFEKNAGFQALIQYPDVATAVTAKEALEGHCIYDGG 312
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQ 265
FCKLH+SYSRHTDL++KVNNDRSRDYT P+ ++ +Q SILGQQP T + G Q
Sbjct: 313 FCKLHLSYSRHTDLNVKVNNDRSRDYTSPNPGLLPNQLSILGQQPSAF-QTTVSAVGGMQ 371
Query: 266 FAPPPPEQPMMHQPTAAGWGAVPP 289
P +++ GA+PP
Sbjct: 372 V---PQSSSLVYSGNNYAGGALPP 392
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 75/120 (62%), Gaps = 7/120 (5%)
Query: 136 SNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
SNVLL +IE ++ V++DVLH+VFSAFG V KIA F+K+ G QAL+Q+ D TA AK
Sbjct: 110 SNVLLVTIEGVEAGDVSIDVLHLVFSAFGFVHKIATFEKSAGFQALVQFSDPNTATSAKN 169
Query: 195 ALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
AL+G I G C L I++S H DL++K + RSRDYT P P+ S GQ
Sbjct: 170 ALDGRSIPRYLLPEHVGLCSLRITFSAHNDLNVKFQSHRSRDYTNPYLPVAPSAIDGTGQ 229
>gi|115438631|ref|NP_001043595.1| Os01g0619000 [Oryza sativa Japonica Group]
gi|54290863|dbj|BAD61524.1| polypyrimidine tract-binding protein-like [Oryza sativa Japonica
Group]
gi|113533126|dbj|BAF05509.1| Os01g0619000 [Oryza sativa Japonica Group]
gi|215697045|dbj|BAG91039.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 448
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/316 (63%), Positives = 231/316 (73%), Gaps = 28/316 (8%)
Query: 1 MFYICRPLSRKYL-QWQLSASGERAHVFSAFGFVHKITTFEKTAGFQALVQFSDTETASS 59
MFY CRPLSR ++ WQ +ASG HVFSAFGFV KI TFEK +G+QAL+QF DTETASS
Sbjct: 1 MFYTCRPLSRSFMASWQATASG--THVFSAFGFVQKIATFEKASGYQALIQFCDTETASS 58
Query: 60 AKNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDA 119
AK ALDGR IP YLLPE PCTLRI YSAHT L+VKFQSHRSRDYTNPYLPVAPSAID
Sbjct: 59 AKAALDGRCIPSYLLPELDVPCTLRINYSAHTVLNVKFQSHRSRDYTNPYLPVAPSAIDG 118
Query: 120 SGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQA 179
SG DGKK E ESNVLLAS+ENMQY VT+DVLH VFSAFG VQKIA+F+KN G QA
Sbjct: 119 SGP-----DGKKQEAESNVLLASVENMQYVVTIDVLHEVFSAFGFVQKIAIFEKNSGFQA 173
Query: 180 LIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMV 239
LIQYPD+QTAV AKEALEGH IY+GG+CKLH+++SRHTDL++KVNN+R RDYT +T
Sbjct: 174 LIQYPDIQTAVAAKEALEGHSIYEGGYCKLHLTFSRHTDLNVKVNNERGRDYTGGNTAPT 233
Query: 240 NSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQ-SMPMMG 298
++QPSILG QPV + YN A P++A VPP + + P
Sbjct: 234 SNQPSILGPQPV-----YSGAYNNA--------------PSSATGAVVPPGTTLTPPGAP 274
Query: 299 NHPYMPPGSMPMGPGM 314
+HPY +P P +
Sbjct: 275 SHPYTSSEPLPQTPAV 290
>gi|294461640|gb|ADE76380.1| unknown [Picea sitchensis]
Length = 511
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/225 (78%), Positives = 201/225 (89%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEK+AGFQALVQFSD +TASSA++ALDGRSIPRYLL E++GPC LRI
Sbjct: 133 VFSAFGFVHKIATFEKSAGFQALVQFSDVDTASSARSALDGRSIPRYLLAEHVGPCHLRI 192
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
++SAHTDL+VKFQSHRSRDYTNP LPVAPSAID +GQ +G DG++ EP SNVLLASIEN
Sbjct: 193 SFSAHTDLNVKFQSHRSRDYTNPNLPVAPSAIDGTGQFGIGPDGQRREPASNVLLASIEN 252
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVT+DVLH VFSAFG VQKIAMF+KN G QALIQY D+ TAV+AKEALEGH IY GG
Sbjct: 253 MQYAVTVDVLHTVFSAFGIVQKIAMFEKNAGWQALIQYADIPTAVIAKEALEGHFIYAGG 312
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQP 250
+CKLH+SYSRHTDL++KVNNDRSRDYTLP ++ +Q SILGQQP
Sbjct: 313 YCKLHLSYSRHTDLNVKVNNDRSRDYTLPKVGILQNQLSILGQQP 357
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 78/120 (65%), Gaps = 7/120 (5%)
Query: 136 SNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
SNVLL +IE ++ V++DVLH+VFSAFG V KIA F+K+ G QAL+Q+ DV TA A+
Sbjct: 110 SNVLLVTIEGVEAGDVSIDVLHLVFSAFGFVHKIATFEKSAGFQALVQFSDVDTASSARS 169
Query: 195 ALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
AL+G I G C L IS+S HTDL++K + RSRDYT P+ P+ S GQ
Sbjct: 170 ALDGRSIPRYLLAEHVGPCHLRISFSAHTDLNVKFQSHRSRDYTNPNLPVAPSAIDGTGQ 229
>gi|168027197|ref|XP_001766117.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682760|gb|EDQ69176.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 488
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/334 (62%), Positives = 240/334 (71%), Gaps = 42/334 (12%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEK+AGFQALVQFSD TAS+AK+AL+GRSIPRYLLP+++GPC LRI
Sbjct: 133 VFSAFGFVHKIATFEKSAGFQALVQFSDANTASAAKSALEGRSIPRYLLPDHVGPCHLRI 192
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
++SAH DL+VKFQSHRSRDYTNPYLPVAPSAID SGQ SVG DGK+ EPESNVLL SIEN
Sbjct: 193 SFSAHNDLNVKFQSHRSRDYTNPYLPVAPSAIDGSGQFSVGPDGKRREPESNVLLVSIEN 252
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVT+DV+H VFSAFG VQKIA+F+K+ G QAL+QYPD+ TAV AKEALEGHCIYDGG
Sbjct: 253 MQYAVTIDVIHTVFSAFGFVQKIAIFEKSAGFQALVQYPDIPTAVGAKEALEGHCIYDGG 312
Query: 206 FCKLHISYSRHTDLSIK------VNNDRSRDYT---LPST--PMVNSQPSILGQQPVPMV 254
FCKLH+SYSRHTDL++K VNNDRSRDYT LP+T P+++ P + QQ
Sbjct: 313 FCKLHLSYSRHTDLNVKALSLLYVNNDRSRDYTNPGLPATQPPVLSQAPGVAQQQSWDTE 372
Query: 255 GATANQYNGAQFAPPPPEQP------MMHQ----------PTAAGWGAVPPA--SQSMPM 296
G+ Q Q + P P QP M HQ P A+G PP + PM
Sbjct: 373 GSGKAQ----QVSGPMPGQPMSGPMYMSHQHGGAVGHHGPPGASGSYQGPPGPVTSMGPM 428
Query: 297 MGNHPYM-PPGSMPMGPGMMQMHMPGQSGMQHHH 329
G P M PPG MGPGM Q G Q HH
Sbjct: 429 SGPGPSMAPPGY--MGPGMHQQ------GQQSHH 454
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 75/120 (62%), Gaps = 7/120 (5%)
Query: 136 SNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
SNVLL +IE ++ V++DVLH+VFSAFG V KIA F+K+ G QAL+Q+ D TA AK
Sbjct: 110 SNVLLVTIEGVEAGDVSIDVLHLVFSAFGFVHKIATFEKSAGFQALVQFSDANTASAAKS 169
Query: 195 ALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
ALEG I G C L IS+S H DL++K + RSRDYT P P+ S GQ
Sbjct: 170 ALEGRSIPRYLLPDHVGPCHLRISFSAHNDLNVKFQSHRSRDYTNPYLPVAPSAIDGSGQ 229
>gi|168060645|ref|XP_001782305.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666235|gb|EDQ52895.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 348
Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 172/212 (81%), Positives = 193/212 (91%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEK+AGFQALVQFSD TAS+AK+AL+GRSIPRYLLP+++GPC LRI
Sbjct: 133 VFSAFGFVHKIATFEKSAGFQALVQFSDANTASAAKSALEGRSIPRYLLPDHVGPCHLRI 192
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
++SAH DL+VKFQSHRSRDYTNPYLPVAPSAID SGQ SVG DGK+ EPESNVLL SIEN
Sbjct: 193 SFSAHNDLNVKFQSHRSRDYTNPYLPVAPSAIDGSGQFSVGPDGKRREPESNVLLVSIEN 252
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVT+DV+H VFSAFG VQKIA+F+K+ G QAL+QYPD+ TAV AKEALEGHCIYDGG
Sbjct: 253 MQYAVTIDVIHTVFSAFGFVQKIAIFEKSAGFQALVQYPDIPTAVGAKEALEGHCIYDGG 312
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
FCKLH+SYSRHTDL++KVNNDRSRDYT P P
Sbjct: 313 FCKLHLSYSRHTDLNVKVNNDRSRDYTNPGLP 344
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 72/110 (65%), Gaps = 7/110 (6%)
Query: 136 SNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
SNVLL +IE ++ V++DVLH+VFSAFG V KIA F+K+ G QAL+Q+ D TA AK
Sbjct: 110 SNVLLVTIEGVEAGDVSIDVLHLVFSAFGFVHKIATFEKSAGFQALVQFSDANTASAAKS 169
Query: 195 ALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
ALEG I G C L IS+S H DL++K + RSRDYT P P+
Sbjct: 170 ALEGRSIPRYLLPDHVGPCHLRISFSAHNDLNVKFQSHRSRDYTNPYLPV 219
>gi|225452859|ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 1
[Vitis vinifera]
gi|296082938|emb|CBI22239.3| unnamed protein product [Vitis vinifera]
Length = 449
Score = 368 bits (944), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 195/322 (60%), Positives = 230/322 (71%), Gaps = 19/322 (5%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEK AGFQAL+QF+D ETASSA+NALDGRSIPRYLLPE++G C LRI
Sbjct: 132 VFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLLPEHVGSCHLRI 191
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
+YSAHTDL++KFQSHRSRDYTNPYLPV P+AI+ Q ++G DGKK EPESNVLLASIEN
Sbjct: 192 SYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIEGIAQPALGPDGKKKEPESNVLLASIEN 251
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVT+DVLH VFSAFG VQKIA+F+KNGG+QALIQYPDV TA VAKEALEGHCIYDGG
Sbjct: 252 MQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGMQALIQYPDVTTAAVAKEALEGHCIYDGG 311
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ-------PSILGQQPVPMVGATA 258
+CKLH+SYSRHTDL++K ++DRSRDYT+P + ++ Q + + Q P T
Sbjct: 312 YCKLHLSYSRHTDLNVKAHSDRSRDYTIPDSGLLAVQQAPGHPGATTVWQNPQAAPLYTG 371
Query: 259 NQYNGAQFAPPPPEQPMMH---QPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMGPGMM 315
+ A P P M A+ A P + + +P PPGS P+ P +
Sbjct: 372 HDAAAAAAVQVPSWDPNMQAGRSTFASAASAFPSQPFASSSISAYP-APPGSSPLTPAVP 430
Query: 316 QMHMPGQSGMQHHHGAMPPPRP 337
PG GA PP RP
Sbjct: 431 PNVRPG--------GASPPGRP 444
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 72/109 (66%), Gaps = 7/109 (6%)
Query: 137 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL +IE ++ V++DV+H+VFSAFG V KIA F+K G QALIQ+ D +TA A+ A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNA 169
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
L+G I G C L ISYS HTDL+IK + RSRDYT P P+
Sbjct: 170 LDGRSIPRYLLPEHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPV 218
>gi|118488224|gb|ABK95931.1| unknown [Populus trichocarpa]
Length = 473
Score = 366 bits (940), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 198/338 (58%), Positives = 232/338 (68%), Gaps = 26/338 (7%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFG++HKI TFEK AGFQAL+QF+D+ETASSA+NALDGRSIPRYLLPE++G C LRI
Sbjct: 132 VFSAFGYLHKIATFEKAAGFQALIQFTDSETASSARNALDGRSIPRYLLPEHVGSCHLRI 191
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
+YSAHTDL++KFQSHRSRDYTNPYLPV P+AI+ Q +VG DGKK EPESNVLLASIEN
Sbjct: 192 SYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIEGPVQPTVGADGKKKEPESNVLLASIEN 251
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVT+DVLH VFSAFG VQKIA+F+KNGG QALIQYPDV TA VAKE LEGHCIYDGG
Sbjct: 252 MQYAVTIDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDVATAAVAKETLEGHCIYDGG 311
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPV----PMVGA--TAN 259
+CKLH+SYSRHTDL++K +D+SRDYT+P ++ +Q L P P G+ T N
Sbjct: 312 YCKLHLSYSRHTDLNVKAYSDKSRDYTIPDASLIAAQAPGLHTAPTMWQNPQAGSMYTGN 371
Query: 260 QYNGAQFAP---PPPEQPMMH---QPTAAGWGAVPPA--SQSMPMMGNHPY----MPPGS 307
Y P PP + P Q G+ +VP Q+ P Y +P GS
Sbjct: 372 NYATTAAVPVQVPPGQVPAWDPTMQAGGQGYASVPGTYPGQTYPTPPASAYATAAIPAGS 431
Query: 308 MPM--------GPGMMQMHMPGQSGMQHHHGAMPPPRP 337
P M M PG GA PP +P
Sbjct: 432 SPRSHSSPISHSVASMAMSHPGMQSNLRPSGASPPGQP 469
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 80/131 (61%), Gaps = 10/131 (7%)
Query: 137 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL +IE ++ V++DV+H+VFSAFG + KIA F+K G QALIQ+ D +TA A+ A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGYLHKIATFEKAAGFQALIQFTDSETASSARNA 169
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQ 249
L+G I G C L ISYS HTDL+IK + RSRDYT P P+ P+ +
Sbjct: 170 LDGRSIPRYLLPEHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPV---NPTAIEGP 226
Query: 250 PVPMVGATANQ 260
P VGA +
Sbjct: 227 VQPTVGADGKK 237
>gi|116787007|gb|ABK24339.1| unknown [Picea sitchensis]
Length = 491
Score = 366 bits (940), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 173/221 (78%), Positives = 200/221 (90%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEKTAGFQALVQFSD +TA+SA++ALDGRSIPRYLLPE++ C LRI
Sbjct: 133 VFSAFGFVHKIATFEKTAGFQALVQFSDADTAASARSALDGRSIPRYLLPEHVASCHLRI 192
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
++SAHTDL+VKFQSHRSRDYTNP LPV PSAID +GQ +VG DGK+ E ESNVLLASIEN
Sbjct: 193 SFSAHTDLNVKFQSHRSRDYTNPNLPVNPSAIDGAGQFTVGPDGKRRELESNVLLASIEN 252
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVT+DVL+ VFSAFG VQKIA+F+KNGG QALIQYPD+ TAV+AKEALEGHCIYDGG
Sbjct: 253 MQYAVTVDVLNTVFSAFGRVQKIAIFEKNGGFQALIQYPDIATAVLAKEALEGHCIYDGG 312
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSIL 246
+CKLH+SYSRHTDL++K NNDRSRDYT+P++ M+ +QP L
Sbjct: 313 YCKLHLSYSRHTDLNVKGNNDRSRDYTIPASGMLPAQPPSL 353
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 71/110 (64%), Gaps = 7/110 (6%)
Query: 136 SNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
SNVLL +IE + V++DVLH+VFSAFG V KIA F+K G QAL+Q+ D TA A+
Sbjct: 110 SNVLLVTIEGVDSGDVSIDVLHLVFSAFGFVHKIATFEKTAGFQALVQFSDADTAASARS 169
Query: 195 ALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
AL+G I C L IS+S HTDL++K + RSRDYT P+ P+
Sbjct: 170 ALDGRSIPRYLLPEHVASCHLRISFSAHTDLNVKFQSHRSRDYTNPNLPV 219
>gi|302789199|ref|XP_002976368.1| hypothetical protein SELMODRAFT_104811 [Selaginella moellendorffii]
gi|302811042|ref|XP_002987211.1| hypothetical protein SELMODRAFT_125500 [Selaginella moellendorffii]
gi|300145108|gb|EFJ11787.1| hypothetical protein SELMODRAFT_125500 [Selaginella moellendorffii]
gi|300155998|gb|EFJ22628.1| hypothetical protein SELMODRAFT_104811 [Selaginella moellendorffii]
Length = 440
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 172/226 (76%), Positives = 197/226 (87%), Gaps = 7/226 (3%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEKTAGFQALVQFSD TAS+A+ ALDGRSIPRYLLPE++G C LRI
Sbjct: 133 VFSAFGFVHKIATFEKTAGFQALVQFSDANTASAARQALDGRSIPRYLLPEHVGSCHLRI 192
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDA-SGQLSVGLDGKKLEPESNVLLASIE 144
++SAHTDL+VKFQSHRSRDYTNPYLPVAPSAI+ S + + G DGK+ EPESNVLLASIE
Sbjct: 193 SFSAHTDLNVKFQSHRSRDYTNPYLPVAPSAINGISQEYTTGPDGKRKEPESNVLLASIE 252
Query: 145 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 204
NMQY+VT+DVLH VF+AFGP+QKIA+F+KN G QALIQY DV TAV AKEALEGHCIY+G
Sbjct: 253 NMQYSVTIDVLHTVFAAFGPIQKIAIFEKNAGFQALIQYADVTTAVAAKEALEGHCIYEG 312
Query: 205 GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQP 250
G+CKLH+SYSRHTDL++KVNNDRSRDYT + PS+LG+ P
Sbjct: 313 GYCKLHLSYSRHTDLNVKVNNDRSRDYT------SSQSPSVLGKAP 352
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 78/121 (64%), Gaps = 7/121 (5%)
Query: 136 SNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
SNVLL +IE ++ V++DVLH+VFSAFG V KIA F+K G QAL+Q+ D TA A++
Sbjct: 110 SNVLLVTIEGVEAGDVSIDVLHLVFSAFGFVHKIATFEKTAGFQALVQFSDANTASAARQ 169
Query: 195 ALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
AL+G I G C L IS+S HTDL++K + RSRDYT P P+ S + + Q
Sbjct: 170 ALDGRSIPRYLLPEHVGSCHLRISFSAHTDLNVKFQSHRSRDYTNPYLPVAPSAINGISQ 229
Query: 249 Q 249
+
Sbjct: 230 E 230
>gi|224141415|ref|XP_002324068.1| predicted protein [Populus trichocarpa]
gi|222867070|gb|EEF04201.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 196/339 (57%), Positives = 227/339 (66%), Gaps = 32/339 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIP----RYLLPENMGPC 81
VFSAFG+VHKI TFEK AGFQAL+QF+D ETASSA+NALDGR+I RYLLPE++G C
Sbjct: 132 VFSAFGYVHKIATFEKAAGFQALIQFTDAETASSARNALDGRNIMFKKFRYLLPEHVGSC 191
Query: 82 TLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLA 141
LRI+YSAHTDL++KFQSHRSRDYTNPYLPV P+AID Q +VG DGKK EPESNVLLA
Sbjct: 192 NLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIDGPVQSTVGADGKKKEPESNVLLA 251
Query: 142 SIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCI 201
SIENMQYAVT+DVLH VFS FG VQKIA+F+KNGG QALIQYPDV TA VAKE LEGHCI
Sbjct: 252 SIENMQYAVTVDVLHTVFSGFGTVQKIAIFEKNGGTQALIQYPDVATAAVAKETLEGHCI 311
Query: 202 YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATA-NQ 260
YDGG+CKLH+SYSRHTDL++K +D+SRDYT+P + +Q L P A +
Sbjct: 312 YDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTIPDASFLTAQAPGLHTAPTTWQNPQAGSM 371
Query: 261 YNGAQFAPP-------PPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPY----------M 303
Y G+ +A PP Q P+ G P S M Y +
Sbjct: 372 YLGSNYATTAAAPAQVPPGQVAAWDPSMQAGG--PGYSSVRGMYPGQTYPTPPAYASSAL 429
Query: 304 PPG------SMPMGPGMMQMHM--PGQSGMQHHHGAMPP 334
PPG S P+ PG+ M M PG GA PP
Sbjct: 430 PPGSSPHSYSSPISPGVASMGMTHPGVQPNMRPGGASPP 468
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 72/113 (63%), Gaps = 11/113 (9%)
Query: 137 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL +IE ++ V++DV+H+VFSAFG V KIA F+K G QALIQ+ D +TA A+ A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGYVHKIATFEKAAGFQALIQFTDAETASSARNA 169
Query: 196 LEGHCIYDGGF----------CKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
L+G I F C L ISYS HTDL+IK + RSRDYT P P+
Sbjct: 170 LDGRNIMFKKFRYLLPEHVGSCNLRISYSAHTDLNIKFQSHRSRDYTNPYLPV 222
>gi|218201199|gb|EEC83626.1| hypothetical protein OsI_29352 [Oryza sativa Indica Group]
Length = 461
Score = 354 bits (908), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 183/300 (61%), Positives = 219/300 (73%), Gaps = 22/300 (7%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEK AGFQAL+Q++D TA AKN+LDGRSIPRYLLPE++ C LRI
Sbjct: 132 VFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPRYLLPEHVPTCHLRI 191
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
T+SAH DL++KFQSHRSRDYTNPYLPV P+AI+ Q ++G DGK EPESNVLLASIEN
Sbjct: 192 TFSAHKDLNIKFQSHRSRDYTNPYLPVNPTAIEGIAQPTLGPDGKIKEPESNVLLASIEN 251
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVT+DVLH VFSAFG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALEGHCIYDGG
Sbjct: 252 MQYAVTVDVLHTVFSAFGTVQKIAMFEKNGGMQALIQYPDITTAAVAKQALEGHCIYDGG 311
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVN----------SQPSILGQQPVPMVG 255
+CKLH+SYSRHTDL++K +++RSRDYT+ S P S P + Q P
Sbjct: 312 YCKLHLSYSRHTDLNVKAHDERSRDYTVSSDPSAQMQAAAQAPGPSTPGVAWQNTAP--- 368
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAG-WGAVPPASQSMPMMGNHPYMPPGSMPMGPGM 314
+A+ Y A P + P + AG +G+ A + PMM PGS+P PG+
Sbjct: 369 -SASFYGSTAAATPVGQVPAWNPNMQAGAFGSASSAYTTQPMM-------PGSVPHYPGI 420
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 69/109 (63%), Gaps = 7/109 (6%)
Query: 137 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL + E +Q +++DV+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 110 NVLLVTFEGVQPNDISIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 169
Query: 196 LEGHCIYDGGF------CKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
L+G I C L I++S H DL+IK + RSRDYT P P+
Sbjct: 170 LDGRSIPRYLLPEHVPTCHLRITFSAHKDLNIKFQSHRSRDYTNPYLPV 218
>gi|115476578|ref|NP_001061885.1| Os08g0436000 [Oryza sativa Japonica Group]
gi|42407521|dbj|BAD10638.1| putative polypyrimidine tract-binding protein homolog [Oryza sativa
Japonica Group]
gi|113623854|dbj|BAF23799.1| Os08g0436000 [Oryza sativa Japonica Group]
gi|215695278|dbj|BAG90469.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640621|gb|EEE68753.1| hypothetical protein OsJ_27445 [Oryza sativa Japonica Group]
Length = 461
Score = 353 bits (905), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 183/300 (61%), Positives = 219/300 (73%), Gaps = 22/300 (7%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEK AGFQAL+Q++D TA AKN+LDGRSIPRYLLPE++ C LRI
Sbjct: 132 VFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPRYLLPEHVPTCHLRI 191
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
T+SAH DL++KFQSHRSRDYTNPYLPV P+AI+ Q ++G DGK EPESNVLLASIEN
Sbjct: 192 TFSAHKDLNIKFQSHRSRDYTNPYLPVNPTAIEGIAQPTLGPDGKIKEPESNVLLASIEN 251
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVT+DVLH VFSAFG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALEGHCIYDGG
Sbjct: 252 MQYAVTVDVLHTVFSAFGTVQKIAMFEKNGGMQALIQYPDITTAAVAKQALEGHCIYDGG 311
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVN----------SQPSILGQQPVPMVG 255
+CKLH+SYSRHTDL++K +++RSRDYT+ S P S P + Q P
Sbjct: 312 YCKLHLSYSRHTDLNVKAHDERSRDYTVSSDPSAQMQAAAQAPGPSTPGVAWQNTAP--- 368
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAG-WGAVPPASQSMPMMGNHPYMPPGSMPMGPGM 314
+A+ Y A P + P + AG +G+ A + PMM PGS+P PG+
Sbjct: 369 -SASFYGSTAAATPVGQVPAWNPNMQAGAFGSASSAYPTQPMM-------PGSVPHYPGI 420
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 69/109 (63%), Gaps = 7/109 (6%)
Query: 137 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL + E +Q +++DV+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 110 NVLLVTFEGVQPNDISIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 169
Query: 196 LEGHCIYDGGF------CKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
L+G I C L I++S H DL+IK + RSRDYT P P+
Sbjct: 170 LDGRSIPRYLLPEHVPTCHLRITFSAHKDLNIKFQSHRSRDYTNPYLPV 218
>gi|54290862|dbj|BAD61523.1| polypyrimidine tract-binding protein 1-like [Oryza sativa Japonica
Group]
gi|125571201|gb|EAZ12716.1| hypothetical protein OsJ_02633 [Oryza sativa Japonica Group]
gi|215740848|dbj|BAG97004.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 185/290 (63%), Positives = 214/290 (73%), Gaps = 25/290 (8%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFV KI TFEK +G+QAL+QF DTETASSAK ALDGR IP YLLPE PCTLRI
Sbjct: 131 VFSAFGFVQKIATFEKASGYQALIQFCDTETASSAKAALDGRCIPSYLLPELDVPCTLRI 190
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
YSAHT L+VKFQSHRSRDYTNPYLPVAPSAID SG DGKK E ESNVLLAS+EN
Sbjct: 191 NYSAHTVLNVKFQSHRSRDYTNPYLPVAPSAIDGSGP-----DGKKQEAESNVLLASVEN 245
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQY VT+DVLH VFSAFG VQKIA+F+KN G QALIQYPD+QTAV AKEALEGH IY+GG
Sbjct: 246 MQYVVTIDVLHEVFSAFGFVQKIAIFEKNSGFQALIQYPDIQTAVAAKEALEGHSIYEGG 305
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQ 265
+CKLH+++SRHTDL++KVNN+R RDYT +T ++QPSILG QPV Y+GA
Sbjct: 306 YCKLHLTFSRHTDLNVKVNNERGRDYTGGNTAPTSNQPSILGPQPV---------YSGA- 355
Query: 266 FAPPPPEQPMMHQPTAAGWGAVPPASQ-SMPMMGNHPYMPPGSMPMGPGM 314
+ P++A VPP + + P +HPY +P P +
Sbjct: 356 ---------YNNAPSSATGAVVPPGTTLTPPGAPSHPYTSSEPLPQTPAV 396
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 74/116 (63%), Gaps = 7/116 (6%)
Query: 133 EPESNVLLASIEN-MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
E NVLL S+E + AV++DVLH+VFSAFG VQKIA F+K G QALIQ+ D +TA
Sbjct: 105 EAAGNVLLVSMEGVLPDAVSIDVLHLVFSAFGFVQKIATFEKASGYQALIQFCDTETASS 164
Query: 192 AKEALEGHCIYDGGF------CKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS 241
AK AL+G CI C L I+YS HT L++K + RSRDYT P P+ S
Sbjct: 165 AKAALDGRCIPSYLLPELDVPCTLRINYSAHTVLNVKFQSHRSRDYTNPYLPVAPS 220
>gi|413922343|gb|AFW62275.1| hypothetical protein ZEAMMB73_137441 [Zea mays]
Length = 462
Score = 350 bits (897), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 182/295 (61%), Positives = 216/295 (73%), Gaps = 23/295 (7%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEK AGFQAL+Q++D TA AKN+LDGRSIP+YLLPE++ C +RI
Sbjct: 132 VFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPKYLLPEHISACHMRI 191
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
T+SAH DL++KFQSHRSRDYTNPYLPV +AI+ Q +VG DGK EPESNVLLASIEN
Sbjct: 192 TFSAHKDLNIKFQSHRSRDYTNPYLPVNQTAIEGIVQPTVGPDGKIKEPESNVLLASIEN 251
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVT+DVLH VFSAFG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALEGHCIYDGG
Sbjct: 252 MQYAVTVDVLHTVFSAFGAVQKIAMFEKNGGMQALIQYPDITTAAVAKQALEGHCIYDGG 311
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPS----------TPMVNSQPSILGQQP----- 250
+CKLH+SYSRHTDL++K ++DRSRDYTL P+++S P + Q P
Sbjct: 312 YCKLHLSYSRHTDLNVKAHDDRSRDYTLSDPNAQLQAAAQAPVISS-PGVAWQNPASAPA 370
Query: 251 VPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNH-PYMP 304
P G+TA Q PP P M P G+ + A + P+M N PY P
Sbjct: 371 APFYGSTAASTPVGQ---PPAWNPNMQAP---GFASASTAYPNPPLMANSTPYYP 419
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 74/118 (62%), Gaps = 9/118 (7%)
Query: 137 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL + E +Q VT++V+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 110 NVLLVTFEGVQPNDVTIEVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 169
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 247
L+G I C + I++S H DL+IK + RSRDYT P P+ +Q +I G
Sbjct: 170 LDGRSIPKYLLPEHISACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPV--NQTAIEG 225
>gi|297832822|ref|XP_002884293.1| polypyrimidine tract-binding [Arabidopsis lyrata subsp. lyrata]
gi|297330133|gb|EFH60552.1| polypyrimidine tract-binding [Arabidopsis lyrata subsp. lyrata]
Length = 398
Score = 347 bits (889), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 179/286 (62%), Positives = 210/286 (73%), Gaps = 30/286 (10%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEK AGFQALVQFSD ETAS+A+NALDGRSIPRYLLPE++G C LR+
Sbjct: 132 VFSAFGFVHKIATFEKAAGFQALVQFSDVETASAARNALDGRSIPRYLLPEHVGSCNLRM 191
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
+YSAHTDL++KFQSHRSRDYTNPYLPV +A+D S Q ++G DGKK+E +SNVLL IEN
Sbjct: 192 SYSAHTDLNIKFQSHRSRDYTNPYLPVNHTAMDGSMQPALGADGKKVESQSNVLLGLIEN 251
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVT+DVLH VFSA+G VQKIA+F+KNG QALIQY D+ TA +AKEALEGHCIYDGG
Sbjct: 252 MQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAIAKEALEGHCIYDGG 311
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQ 265
+CKL +SYSRHTDL++K +D+SRDYTLP S+L Q+ P V A+
Sbjct: 312 YCKLRLSYSRHTDLNVKAFSDKSRDYTLPDL-------SLLAQKG-PGVSAS-------- 355
Query: 266 FAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMG 311
APP Q Q +G+G PYM P S P G
Sbjct: 356 -APPTGWQNPQVQTQYSGYGG-------------SPYMYPSSDPNG 387
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 137 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL + E ++ + V++DV+H+VFSAFG V KIA F+K G QAL+Q+ DV+TA A+ A
Sbjct: 110 NVLLVTFEGVESHEVSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFSDVETASAARNA 169
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
L+G I G C L +SYS HTDL+IK + RSRDYT P P+
Sbjct: 170 LDGRSIPRYLLPEHVGSCNLRMSYSAHTDLNIKFQSHRSRDYTNPYLPV 218
>gi|356531748|ref|XP_003534438.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 1 [Glycine max]
Length = 496
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 160/217 (73%), Positives = 190/217 (87%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEKTAGFQAL+QF+D ETASSA++ALDGRSIPRYLLP ++G C LRI
Sbjct: 132 VFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDALDGRSIPRYLLPAHVGSCNLRI 191
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
+YSAH DL++KFQS+RSRDYTNP LPV +AI+ + Q +VG DGK+ EPESNVLLASIEN
Sbjct: 192 SYSAHKDLNIKFQSNRSRDYTNPMLPVNYTAIEGAVQTAVGPDGKRKEPESNVLLASIEN 251
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVT+DVLH VFSAFG VQKIA+F+KNG QALIQYPD+ TA A+EALEGHCIYDGG
Sbjct: 252 MQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDIITASAAREALEGHCIYDGG 311
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ 242
+CKLH+SYSRHTDL++K +D+SRDYT+P ++ +Q
Sbjct: 312 YCKLHLSYSRHTDLNVKAFSDKSRDYTVPDPSLLAAQ 348
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 137 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL +IE ++ V++DV+H+VFSAFG V KIA F+K G QALIQ+ D +TA A++A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDA 169
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
L+G I G C L ISYS H DL+IK ++RSRDYT P P+
Sbjct: 170 LDGRSIPRYLLPAHVGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPV 218
>gi|356568676|ref|XP_003552536.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 1 [Glycine max]
Length = 496
Score = 344 bits (882), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 166/239 (69%), Positives = 199/239 (83%), Gaps = 3/239 (1%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEKTAGFQAL+QF+D ETASSA++ALDGRSIPRYLLP ++G C LRI
Sbjct: 132 VFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDALDGRSIPRYLLPAHVGSCNLRI 191
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
+YSAH DL++KFQS+RSRDYTNP LPV +AI+ + Q +VG DGK+ EP+SNVLLASIEN
Sbjct: 192 SYSAHKDLNIKFQSNRSRDYTNPMLPVNYTAIEGAVQTAVGPDGKRKEPDSNVLLASIEN 251
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVT+DVLH VFSAFG VQKIA+F+KNG QALIQYPD+ TA A+EALEGHCIYDGG
Sbjct: 252 MQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDIITASAAREALEGHCIYDGG 311
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ-PSILGQQP--VPMVGATANQY 261
+CKLH+SYSRHTDL++K +D+SRDYT+P ++ +Q P+ Q P PM +A Y
Sbjct: 312 YCKLHLSYSRHTDLNVKAFSDKSRDYTVPDPSLLAAQGPATAWQNPQAAPMYPGSAPAY 370
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 137 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL +IE ++ V++DV+H+VFSAFG V KIA F+K G QALIQ+ D +TA A++A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDA 169
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
L+G I G C L ISYS H DL+IK ++RSRDYT P P+
Sbjct: 170 LDGRSIPRYLLPAHVGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPV 218
>gi|357147881|ref|XP_003574527.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 1 [Brachypodium distachyon]
Length = 459
Score = 343 bits (881), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 163/225 (72%), Positives = 191/225 (84%), Gaps = 3/225 (1%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEK AGFQAL+Q++D TA AKN+LDGRSIPRYLLPE++ C LRI
Sbjct: 131 VFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPRYLLPEHVSICHLRI 190
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
T+SAH DL++KFQSHRSRDYTNPYLPV P+AI+ QL++G DGK EPESNVLLASIEN
Sbjct: 191 TFSAHKDLNIKFQSHRSRDYTNPYLPVNPTAIEGIAQLTLGPDGKVKEPESNVLLASIEN 250
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAV +DVLH VF++FG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALEGHCIYDGG
Sbjct: 251 MQYAVGVDVLHTVFNSFGTVQKIAMFEKNGGMQALIQYPDISTAAVAKQALEGHCIYDGG 310
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQP 250
+CKLH+SYSRHTDL++K +++RSRDYT S P Q + GQ P
Sbjct: 311 YCKLHLSYSRHTDLNVKAHDERSRDYT-ASNPSAQVQAA--GQAP 352
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 70/109 (64%), Gaps = 7/109 (6%)
Query: 137 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL + E++Q V++DV+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 109 NVLLVTFEDVQPNDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 168
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
L+G I C L I++S H DL+IK + RSRDYT P P+
Sbjct: 169 LDGRSIPRYLLPEHVSICHLRITFSAHKDLNIKFQSHRSRDYTNPYLPV 217
>gi|357130514|ref|XP_003566893.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Brachypodium distachyon]
Length = 544
Score = 343 bits (881), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 168/239 (70%), Positives = 195/239 (81%), Gaps = 5/239 (2%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFG+VHKI TFEK +G+QAL+QFSD ETASSAK ALDGR IP YLLP+ G CTLRI
Sbjct: 132 VFSAFGYVHKIATFEKASGYQALIQFSDAETASSAKAALDGRCIPSYLLPDLDGACTLRI 191
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
YSAH+ L+VKFQSHRSRDYTNPYLP+APSAID SG LDGKK E ESNVLLAS+EN
Sbjct: 192 NYSAHSVLNVKFQSHRSRDYTNPYLPLAPSAIDGSG-----LDGKKQEAESNVLLASVEN 246
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQY VT+D LH VFSAFG V KIA+F+KN G ALIQYPD+QTAV A+EALEGH IY+GG
Sbjct: 247 MQYIVTIDALHEVFSAFGFVHKIAIFEKNSGFHALIQYPDIQTAVKAREALEGHSIYEGG 306
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGA 264
+CKLH+++SRHTDL++++NN+R RDYT S+ N +PSILG QP VGA A Y+ A
Sbjct: 307 YCKLHLTFSRHTDLNVRINNERGRDYTGGSSAPANYEPSILGPQPTLPVGAVAPPYSSA 365
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 73/112 (65%), Gaps = 7/112 (6%)
Query: 137 NVLLASIEN-MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL ++E + AV++DVLH+VFSAFG V KIA F+K G QALIQ+ D +TA AK A
Sbjct: 110 NVLLVTMEGVLPDAVSIDVLHLVFSAFGYVHKIATFEKASGYQALIQFSDAETASSAKAA 169
Query: 196 LEGHCIYD------GGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS 241
L+G CI G C L I+YS H+ L++K + RSRDYT P P+ S
Sbjct: 170 LDGRCIPSYLLPDLDGACTLRINYSAHSVLNVKFQSHRSRDYTNPYLPLAPS 221
>gi|15232047|ref|NP_186764.1| polypyrimidine tract-binding protein 1 [Arabidopsis thaliana]
gi|75336151|sp|Q9MAC5.1|PTBP1_ARATH RecName: Full=Polypyrimidine tract-binding protein homolog 1
gi|6714473|gb|AAF26159.1|AC008261_16 putative polypyrimidine tract-binding protein [Arabidopsis
thaliana]
gi|222423255|dbj|BAH19604.1| AT3G01150 [Arabidopsis thaliana]
gi|332640095|gb|AEE73616.1| polypyrimidine tract-binding protein 1 [Arabidopsis thaliana]
Length = 399
Score = 343 bits (879), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 176/286 (61%), Positives = 207/286 (72%), Gaps = 29/286 (10%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEK AGFQALVQF+D ETAS+A++ALDGRSIPRYLL ++G C+LR+
Sbjct: 132 VFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPRYLLSAHVGSCSLRM 191
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
+YSAHTDL++KFQSHRSRDYTNPYLPV +A+D S Q ++G DGKK+E +SNVLL IEN
Sbjct: 192 SYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKKVESQSNVLLGLIEN 251
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVT+DVLH VFSA+G VQKIA+F+KNG QALIQY D+ TA +AKEALEGHCIYDGG
Sbjct: 252 MQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEALEGHCIYDGG 311
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQ 265
+CKL +SYSRHTDL++K +D+SRDYTLP S+L Q P V +A
Sbjct: 312 YCKLRLSYSRHTDLNVKAFSDKSRDYTLPDL-------SLLVAQKGPAVSGSA------- 357
Query: 266 FAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMG 311
PP AGW P A G PYM P S P G
Sbjct: 358 ----PP----------AGWQN-PQAQSQYSGYGGSPYMYPSSDPNG 388
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 137 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL + E ++ + V++DV+H+VFSAFG V KIA F+K G QAL+Q+ DV+TA A+ A
Sbjct: 110 NVLLVTFEGVESHEVSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSA 169
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
L+G I G C L +SYS HTDL+IK + RSRDYT P P+
Sbjct: 170 LDGRSIPRYLLSAHVGSCSLRMSYSAHTDLNIKFQSHRSRDYTNPYLPV 218
>gi|242079253|ref|XP_002444395.1| hypothetical protein SORBIDRAFT_07g021250 [Sorghum bicolor]
gi|241940745|gb|EES13890.1| hypothetical protein SORBIDRAFT_07g021250 [Sorghum bicolor]
Length = 462
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 158/208 (75%), Positives = 184/208 (88%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEK AGFQAL+Q++D TA AKN+LDGRSIP+YLLPE++ C +RI
Sbjct: 132 VFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPKYLLPEHISACHMRI 191
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
T+SAH DL++KFQSHRSRDYTNPYLPV +AI+ Q +VG DGK EPESNVLLASIEN
Sbjct: 192 TFSAHKDLNIKFQSHRSRDYTNPYLPVNQTAIEGIVQPTVGPDGKVKEPESNVLLASIEN 251
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVT+DVLH VFSAFG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALEGHCIYDGG
Sbjct: 252 MQYAVTVDVLHTVFSAFGSVQKIAMFEKNGGMQALIQYPDITTAAVAKQALEGHCIYDGG 311
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTL 233
+CKLH+SYSRHTDL++K +++RSRDYTL
Sbjct: 312 YCKLHLSYSRHTDLNVKAHDERSRDYTL 339
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 74/118 (62%), Gaps = 9/118 (7%)
Query: 137 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL + E +Q VT++V+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 110 NVLLVTFEGVQPNDVTIEVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 169
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 247
L+G I C + I++S H DL+IK + RSRDYT P P+ +Q +I G
Sbjct: 170 LDGRSIPKYLLPEHISACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPV--NQTAIEG 225
>gi|3395938|gb|AAC62015.1| polypyrimidine tract-binding protein homolog [Arabidopsis thaliana]
Length = 418
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 159/227 (70%), Positives = 193/227 (85%), Gaps = 2/227 (0%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEK AGFQALVQF+D ETAS+A++ALDGRSIPRYLL ++G C+LR+
Sbjct: 132 VFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPRYLLSAHVGSCSLRM 191
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
+YSAHTDL++KFQSHRSRDYTNPYLPV +A+D S Q ++G DGKK+E +SNVLL IEN
Sbjct: 192 SYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKKVESQSNVLLGLIEN 251
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVT+DVLH VFSA+G VQKIA+F+KNG QALIQY D+ TA +AKEALEGHCIYDGG
Sbjct: 252 MQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEALEGHCIYDGG 311
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ--PSILGQQP 250
+CKL +SYSRHTDL++K +D+SRDYTLP ++ +Q P++ G P
Sbjct: 312 YCKLRLSYSRHTDLNVKAFSDKSRDYTLPDLSLLVAQKGPAVSGSAP 358
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 137 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL + E ++ + V++DV+H+VFSAFG V KIA F+K G QAL+Q+ DV+TA A+ A
Sbjct: 110 NVLLVTFEGVESHEVSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSA 169
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
L+G I G C L +SYS HTDL+IK + RSRDYT P P+
Sbjct: 170 LDGRSIPRYLLSAHVGSCSLRMSYSAHTDLNIKFQSHRSRDYTNPYLPV 218
>gi|388491010|gb|AFK33571.1| unknown [Lotus japonicus]
Length = 457
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 184/327 (56%), Positives = 225/327 (68%), Gaps = 23/327 (7%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEKTAGFQAL+QF+D ETAS A+NALDGRSIP YLLP+++G C LRI
Sbjct: 132 VFSAFGFVHKIATFEKTAGFQALIQFTDAETASLARNALDGRSIPSYLLPQHVGSCNLRI 191
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
+YSAH DL++KFQS+RSRDYTNP LPV +AID + Q VG DGK+ E ESNVLLA+IEN
Sbjct: 192 SYSAHRDLNIKFQSNRSRDYTNPMLPVNQTAIDGALQPVVGPDGKRTESESNVLLATIEN 251
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVT++VLH VFSAFG VQKIA+F+KNG QALIQYPDV TA AKEALEGHCIYDGG
Sbjct: 252 MQYAVTVEVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDVTTAAAAKEALEGHCIYDGG 311
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYT----------LPSTPMVN---------SQPSIL 246
+CKLH++YSRHTDL++K +D+SRDYT +P+T N S P++
Sbjct: 312 YCKLHLTYSRHTDLNVKAYSDKSRDYTVLDPSLRAAQVPATAWPNPQAAPMYPGSAPALQ 371
Query: 247 GQQPVPMVGAT--ANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMP 304
GQ + + A+Q + P P P + P A + + SM + N P
Sbjct: 372 GQVSGGQMSSWDPAHQEVSQSYIPAPGTFP-GYSPAATSSNHLVHNASSMGITQNVHSQP 430
Query: 305 PGSMPMGPGMMQMHMPGQ-SGMQHHHG 330
+ P GPG P +G+QH+HG
Sbjct: 431 SVASPPGPGSSPHTQPSSFAGLQHYHG 457
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 81/123 (65%), Gaps = 10/123 (8%)
Query: 137 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL ++E ++ VT+DV+H+VFSAFG V KIA F+K G QALIQ+ D +TA +A+ A
Sbjct: 110 NVLLVTMEGVEAGDVTIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASLARNA 169
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ- 248
L+G I G C L ISYS H DL+IK ++RSRDYT P P+ +Q +I G
Sbjct: 170 LDGRSIPSYLLPQHVGSCNLRISYSAHRDLNIKFQSNRSRDYTNPMLPV--NQTAIDGAL 227
Query: 249 QPV 251
QPV
Sbjct: 228 QPV 230
>gi|326511767|dbj|BAJ92028.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 470
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 170/281 (60%), Positives = 204/281 (72%), Gaps = 38/281 (13%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEK AGFQAL+Q++D TAS+A+ ALDGRSIPRYLLP+++ C LRI
Sbjct: 136 VFSAFGFVHKIATFEKAAGFQALIQYTDPPTASAAREALDGRSIPRYLLPDHVVSCHLRI 195
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
++SAH DL++KFQSHRSRDYTNPYLPV SAID++ Q +VG DG+++E E NVLLASIEN
Sbjct: 196 SFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAIDSTLQPAVGADGRRVEAEGNVLLASIEN 255
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAV++DVLH VFSAFG VQKIA+F+KNGG QALIQYPD TA + KEALEGHCIYDGG
Sbjct: 256 MQYAVSVDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDASTATIVKEALEGHCIYDGG 315
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQ 265
+CK+H+SYSRHTDL++K ++D+S+DYT+P GAQ
Sbjct: 316 YCKIHLSYSRHTDLNVKAHSDKSKDYTIPE---------------------------GAQ 348
Query: 266 FAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPG 306
A P QP PT AGW A+ PY PPG
Sbjct: 349 QAAP---QPAGVPPTTAGWQGNSQAAG--------PYGPPG 378
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/131 (51%), Positives = 80/131 (61%), Gaps = 10/131 (7%)
Query: 133 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
E NVLL +IE +Q + VT+DV+H+VFSAFG V KIA F+K G QALIQY D TA
Sbjct: 110 ETAGNVLLVTIEGVQASDVTIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDPPTASA 169
Query: 192 AKEALEGHCIYDGGF------CKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A+EAL+G I C L IS+S H DL+IK + RSRDYT P P VNS S
Sbjct: 170 AREALDGRSIPRYLLPDHVVSCHLRISFSAHKDLNIKFQSHRSRDYTNPYLP-VNS--SA 226
Query: 246 LGQQPVPMVGA 256
+ P VGA
Sbjct: 227 IDSTLQPAVGA 237
>gi|413922344|gb|AFW62276.1| hypothetical protein ZEAMMB73_137441 [Zea mays]
Length = 458
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 179/295 (60%), Positives = 212/295 (71%), Gaps = 27/295 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEK AGFQ ++D TA AKN+LDGRSIP+YLLPE++ C +RI
Sbjct: 132 VFSAFGFVHKIATFEKAAGFQ----YTDAPTALEAKNSLDGRSIPKYLLPEHISACHMRI 187
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
T+SAH DL++KFQSHRSRDYTNPYLPV +AI+ Q +VG DGK EPESNVLLASIEN
Sbjct: 188 TFSAHKDLNIKFQSHRSRDYTNPYLPVNQTAIEGIVQPTVGPDGKIKEPESNVLLASIEN 247
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVT+DVLH VFSAFG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALEGHCIYDGG
Sbjct: 248 MQYAVTVDVLHTVFSAFGAVQKIAMFEKNGGMQALIQYPDITTAAVAKQALEGHCIYDGG 307
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPS----------TPMVNSQPSILGQQP----- 250
+CKLH+SYSRHTDL++K ++DRSRDYTL P+++S P + Q P
Sbjct: 308 YCKLHLSYSRHTDLNVKAHDDRSRDYTLSDPNAQLQAAAQAPVISS-PGVAWQNPASAPA 366
Query: 251 VPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNH-PYMP 304
P G+TA Q PP P M P G+ + A + P+M N PY P
Sbjct: 367 APFYGSTAASTPVGQ---PPAWNPNMQAP---GFASASTAYPNPPLMANSTPYYP 415
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 70/118 (59%), Gaps = 13/118 (11%)
Query: 137 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL + E +Q VT++V+H+VFSAFG V KIA F+K G QY D TA+ AK +
Sbjct: 110 NVLLVTFEGVQPNDVTIEVIHLVFSAFGFVHKIATFEKAAGF----QYTDAPTALEAKNS 165
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 247
L+G I C + I++S H DL+IK + RSRDYT P P+ +Q +I G
Sbjct: 166 LDGRSIPKYLLPEHISACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPV--NQTAIEG 221
>gi|242058047|ref|XP_002458169.1| hypothetical protein SORBIDRAFT_03g028150 [Sorghum bicolor]
gi|241930144|gb|EES03289.1| hypothetical protein SORBIDRAFT_03g028150 [Sorghum bicolor]
Length = 553
Score = 337 bits (865), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 164/232 (70%), Positives = 193/232 (83%), Gaps = 6/232 (2%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEK +G+QAL+QFSD ETA+SAK ALDGR IP YLLPE G CTL+I
Sbjct: 132 VFSAFGFVHKIATFEKASGYQALIQFSDAETATSAKAALDGRCIPSYLLPELDGACTLKI 191
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
+YSAH+ L+VK+QSHRSRD+TNPYLP SA DAS GLDGKK E ESN+LLAS+EN
Sbjct: 192 SYSAHSVLNVKYQSHRSRDFTNPYLPFLDSAKDAS-----GLDGKKQEAESNILLASVEN 246
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQY VT+DVLH VFSAFG VQKIA+F+KN G QALIQYPD+QTAV AKEALEGH IY+GG
Sbjct: 247 MQYVVTIDVLHEVFSAFGFVQKIAIFEKN-GFQALIQYPDIQTAVAAKEALEGHSIYEGG 305
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGAT 257
+CKLH+++SRHT+L++KVNN+R RDYT + + +PSILG QP+P VGA
Sbjct: 306 YCKLHLTFSRHTELNVKVNNERGRDYTKGNVTPSSDRPSILGPQPIPNVGAA 357
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 9/117 (7%)
Query: 133 EPESNVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
E NVLL +E + +V++DVLH+VFSAFG V KIA F+K G QALIQ+ D +TA
Sbjct: 106 EGSGNVLLVGMEGVAPDSVSIDVLHVVFSAFGFVHKIATFEKASGYQALIQFSDAETATS 165
Query: 192 AKEALEGHCI-------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS 241
AK AL+G CI DG C L ISYS H+ L++K + RSRD+T P P ++S
Sbjct: 166 AKAALDGRCIPSYLLPELDGA-CTLKISYSAHSVLNVKYQSHRSRDFTNPYLPFLDS 221
>gi|326502954|dbj|BAJ99105.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 171/281 (60%), Positives = 204/281 (72%), Gaps = 38/281 (13%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEK AGFQAL+Q++D TAS+A+ ALDGRSIPRYLLP+++ C LRI
Sbjct: 9 VFSAFGFVHKIATFEKAAGFQALIQYTDPPTASAAREALDGRSIPRYLLPDHVVSCHLRI 68
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
++SAH DL++KFQSHRSRDYTNPYLPV SAID++ Q +VG DG+++E E NVLLASIEN
Sbjct: 69 SFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAIDSTLQPAVGADGRRVEAEGNVLLASIEN 128
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAV++DVLH VFSAFG VQKIA+F+KNGG QALIQYPD TA +AKEALEGHCIYDGG
Sbjct: 129 MQYAVSVDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDASTATIAKEALEGHCIYDGG 188
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQ 265
+CK+H+SYSRHTDL++K ++D+S+DYT P GAQ
Sbjct: 189 YCKIHLSYSRHTDLNVKAHSDKSKDYTTP---------------------------EGAQ 221
Query: 266 FAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPG 306
A P QP PT AGW A+ PY PPG
Sbjct: 222 QAAP---QPAGVPPTTAGWQGNSQAAG--------PYGPPG 251
>gi|414881408|tpg|DAA58539.1| TPA: hypothetical protein ZEAMMB73_710436 [Zea mays]
Length = 560
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/281 (61%), Positives = 202/281 (71%), Gaps = 35/281 (12%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEK +G+QAL+QFSD ETA+SAK ALDGR IP YLLPE CTLRI
Sbjct: 132 VFSAFGFVHKIATFEKASGYQALIQFSDAETATSAKAALDGRCIPSYLLPELDVACTLRI 191
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
TYSAH+ L+VK+QSHRSRD+TNPYLP SA D SG DGKK E ESN+LLASIEN
Sbjct: 192 TYSAHSVLNVKYQSHRSRDFTNPYLPFLDSAKDGSGP-----DGKKQEAESNILLASIEN 246
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQY VT+DVLH VFSAFG VQKIA+F+KN G QALIQYPD+QTA AKEALEGH IY+GG
Sbjct: 247 MQYVVTIDVLHEVFSAFGFVQKIAIFEKN-GFQALIQYPDIQTAYAAKEALEGHSIYEGG 305
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQ 265
+CKLH+++SRHT+L++KVNN+R RDYT + + QPSILG QP+P VGA
Sbjct: 306 YCKLHLTFSRHTELNVKVNNERGRDYTKGNATPSSDQPSILGPQPIPSVGA--------- 356
Query: 266 FAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPG 306
A+PPA S+P + MPPG
Sbjct: 357 --------------------AIPPAQGSVPSAATNSVMPPG 377
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 74/117 (63%), Gaps = 9/117 (7%)
Query: 133 EPESNVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
E NVLL +E + +V++DVLH+VFSAFG V KIA F+K G QALIQ+ D +TA
Sbjct: 106 EGSGNVLLVGMEGVAPDSVSIDVLHVVFSAFGFVHKIATFEKASGYQALIQFSDAETATS 165
Query: 192 AKEALEGHCI-------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS 241
AK AL+G CI D C L I+YS H+ L++K + RSRD+T P P ++S
Sbjct: 166 AKAALDGRCIPSYLLPELDVA-CTLRITYSAHSVLNVKYQSHRSRDFTNPYLPFLDS 221
>gi|77745463|gb|ABB02630.1| polypyrimidine tract-binding-like [Solanum tuberosum]
Length = 437
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 166/264 (62%), Positives = 199/264 (75%), Gaps = 5/264 (1%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFV KI TFEK AGFQAL+QFSD TAS+A+ ALDGRSIP+YLLPE++ C LRI
Sbjct: 132 VFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREALDGRSIPKYLLPEHVNHCHLRI 191
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
+YSAHTDL++KFQSHRSRDYTNPYLPV P+A++ Q VG DGKK EPESNVL AS+EN
Sbjct: 192 SYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGVLQPVVGPDGKKKEPESNVLFASLEN 251
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVT+DVL+ VFSAFG VQKIA+F+KNG QALIQYPDV A AK+ALEGHCIYDGG
Sbjct: 252 MQYAVTVDVLNTVFSAFGTVQKIAIFEKNGQTQALIQYPDVTIAAAAKDALEGHCIYDGG 311
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ--PSILGQQPV---PMVGATANQ 260
+CKLH+SYSRHTDL+++ +D+SRDYT+P + ++ Q ++ PV P G +
Sbjct: 312 YCKLHLSYSRHTDLNVQAYSDKSRDYTVPESSLLAMQQASAVHATPPVWHNPQSGPVQSS 371
Query: 261 YNGAQFAPPPPEQPMMHQPTAAGW 284
A P + P P GW
Sbjct: 372 AGYATTGTVPGQAPPTWNPNLQGW 395
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/126 (50%), Positives = 80/126 (63%), Gaps = 10/126 (7%)
Query: 137 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL +IE ++ V++DV+H+VFSAFG VQKIA F+K G QALIQ+ DV TA A+EA
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREA 169
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQ 249
L+G I C L ISYS HTDL+IK + RSRDYT P P+ P+ +
Sbjct: 170 LDGRSIPKYLLPEHVNHCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPV---NPTAMEGV 226
Query: 250 PVPMVG 255
P+VG
Sbjct: 227 LQPVVG 232
>gi|326494672|dbj|BAJ94455.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528325|dbj|BAJ93344.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 447
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 171/273 (62%), Positives = 205/273 (75%), Gaps = 12/273 (4%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEK AGFQAL+Q++D TA AKN+LDGRSIPRYLL +++ C LRI
Sbjct: 131 VFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPRYLLADHVSICHLRI 190
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
T+SAH DL++KFQSHRSRDYTNPYLPV P+AI+ Q +G DG EPESNVLLASIEN
Sbjct: 191 TFSAHKDLNIKFQSHRSRDYTNPYLPVNPTAIEGITQPILGSDGMIKEPESNVLLASIEN 250
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAV +DVLH VFS+FG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALEGHCIYDGG
Sbjct: 251 MQYAVGVDVLHTVFSSFGAVQKIAMFEKNGGMQALIQYPDITTAGVAKQALEGHCIYDGG 310
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYT-LPSTPMVNSQPSILGQQPVP--MVGATANQYN 262
+CKLH+SYSRHTDL++K +++RSRDYT L + V + P ++ Q P G++A +
Sbjct: 311 YCKLHLSYSRHTDLNVKAHDERSRDYTVLDPSARVQAPPGVVWQSTTPAGFYGSSAGATS 370
Query: 263 GAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMP 295
Q P P M + GA AS S P
Sbjct: 371 VGQV---PTWNPNMQR------GAFASASTSYP 394
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 69/109 (63%), Gaps = 7/109 (6%)
Query: 137 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL + E +Q V++DV+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 109 NVLLVTFEGVQPNDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 168
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
L+G I C L I++S H DL+IK + RSRDYT P P+
Sbjct: 169 LDGRSIPRYLLADHVSICHLRITFSAHKDLNIKFQSHRSRDYTNPYLPV 217
>gi|414867006|tpg|DAA45563.1| TPA: hypothetical protein ZEAMMB73_334584 [Zea mays]
Length = 504
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 151/210 (71%), Positives = 185/210 (88%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFG+VHKI TFEK AGFQAL+Q++D +TAS+A+ ALDGRSIP YLLPE++ C LRI
Sbjct: 134 VFSAFGYVHKIATFEKAAGFQALIQYTDADTASAAREALDGRSIPSYLLPEHVTSCCLRI 193
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
++SAH DL++KFQS+RSRDY NPYLP+ SA+D + Q +VG DG+K+E + NVLLASIEN
Sbjct: 194 SFSAHKDLNIKFQSNRSRDYNNPYLPINYSAMDGTLQPAVGSDGRKVEAQGNVLLASIEN 253
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAV++DVLH VFS+FG VQKIA+F+KNGG QALIQYPDV TA VAKEALEGHCIYDGG
Sbjct: 254 MQYAVSVDVLHTVFSSFGTVQKIAIFEKNGGTQALIQYPDVNTAAVAKEALEGHCIYDGG 313
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
+CKLH+SYSRHTDL++K + D+SRDYT+P+
Sbjct: 314 YCKLHLSYSRHTDLNVKAHGDKSRDYTIPA 343
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 72/113 (63%), Gaps = 7/113 (6%)
Query: 133 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
E NVLL +IE +Q + VT+DV+HMVFSAFG V KIA F+K G QALIQY D TA
Sbjct: 108 ETAGNVLLVTIEGVQASDVTIDVIHMVFSAFGYVHKIATFEKAAGFQALIQYTDADTASA 167
Query: 192 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
A+EAL+G I C L IS+S H DL+IK ++RSRDY P P+
Sbjct: 168 AREALDGRSIPSYLLPEHVTSCCLRISFSAHKDLNIKFQSNRSRDYNNPYLPI 220
>gi|81076794|gb|ABB55397.1| polypyrimidine tract-binding protein-like [Solanum tuberosum]
Length = 442
Score = 333 bits (854), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 156/217 (71%), Positives = 185/217 (85%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFV KI TFEK AGFQAL+QFSD TAS+A+ ALDGRSIP+YLLPE++ C LRI
Sbjct: 132 VFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREALDGRSIPKYLLPEHVNHCHLRI 191
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
+YSAHTDL++KFQSHRSRDYTNPYLPV P+A++ Q VG DGKK EPESNVL AS+EN
Sbjct: 192 SYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGVLQPVVGPDGKKKEPESNVLFASLEN 251
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVT+DVL+ VFSAFG VQKIA+F+KNG QALIQYPDV A AK+ALEGHCIYDGG
Sbjct: 252 MQYAVTVDVLNTVFSAFGTVQKIAIFEKNGQTQALIQYPDVTIAAAAKDALEGHCIYDGG 311
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ 242
+CKLH+SYSRHTDL+++ +D+SRDYT+P + ++ Q
Sbjct: 312 YCKLHLSYSRHTDLNVQAYSDKSRDYTVPESSLLAMQ 348
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 137 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL +IE ++ V++DV+H+VFSAFG VQKIA F+K G QALIQ+ DV TA A+EA
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREA 169
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
L+G I C L ISYS HTDL+IK + RSRDYT P P+
Sbjct: 170 LDGRSIPKYLLPEHVNHCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPV 218
>gi|334702291|gb|AEG89705.1| polypyrimidine tract-binding protein 7 [Solanum tuberosum]
Length = 467
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 156/217 (71%), Positives = 185/217 (85%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFV KI TFEK AGFQAL+QFSD TAS+A+ ALDGRSIP+YLLPE++ C LRI
Sbjct: 132 VFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREALDGRSIPKYLLPEHVNHCHLRI 191
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
+YSAHTDL++KFQSHRSRDYTNPYLPV P+A++ Q VG DGKK EPESNVL AS+EN
Sbjct: 192 SYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGVLQPVVGPDGKKKEPESNVLFASLEN 251
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVT+DVL+ VFSAFG VQKIA+F+KNG QALIQYPDV A AK+ALEGHCIYDGG
Sbjct: 252 MQYAVTVDVLNTVFSAFGTVQKIAIFEKNGQTQALIQYPDVTIAAAAKDALEGHCIYDGG 311
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ 242
+CKLH+SYSRHTDL+++ +D+SRDYT+P + ++ Q
Sbjct: 312 YCKLHLSYSRHTDLNVQAYSDKSRDYTVPESSLLAMQ 348
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 137 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL +IE ++ V++DV+H+VFSAFG VQKIA F+K G QALIQ+ DV TA A+EA
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREA 169
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
L+G I C L ISYS HTDL+IK + RSRDYT P P+
Sbjct: 170 LDGRSIPKYLLPEHVNHCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPV 218
>gi|223972751|gb|ACN30563.1| unknown [Zea mays]
gi|223973771|gb|ACN31073.1| unknown [Zea mays]
Length = 487
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 150/210 (71%), Positives = 184/210 (87%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFG+VHKI TFEK AGFQAL+Q++D TAS+AK +LDGRSIP YLLPE++ C LRI
Sbjct: 134 VFSAFGYVHKIATFEKAAGFQALIQYTDAATASAAKESLDGRSIPSYLLPEHVTSCCLRI 193
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
++SAH DL++KFQS+RSRDY NPYLP+ SA+D + Q +VG DG+++E + NVLLASIEN
Sbjct: 194 SFSAHKDLNIKFQSNRSRDYNNPYLPINYSAMDGTLQPAVGADGRQVEAQGNVLLASIEN 253
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVT+DVLH VFS+FG VQKIA+F+KNGG QALIQYPDV TA VAKE+LEGHCIYDGG
Sbjct: 254 MQYAVTVDVLHTVFSSFGSVQKIAIFEKNGGTQALIQYPDVSTAAVAKESLEGHCIYDGG 313
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
+CKLH+SYSRHTDL++K + D+SRDYT+P+
Sbjct: 314 YCKLHLSYSRHTDLNVKAHGDKSRDYTIPA 343
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 72/113 (63%), Gaps = 7/113 (6%)
Query: 133 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
E NVLL +IE +Q + VT+DV+HMVFSAFG V KIA F+K G QALIQY D TA
Sbjct: 108 ETAGNVLLVTIEGVQSSDVTIDVIHMVFSAFGYVHKIATFEKAAGFQALIQYTDAATASA 167
Query: 192 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
AKE+L+G I C L IS+S H DL+IK ++RSRDY P P+
Sbjct: 168 AKESLDGRSIPSYLLPEHVTSCCLRISFSAHKDLNIKFQSNRSRDYNNPYLPI 220
>gi|226495275|ref|NP_001151769.1| polypyrimidine tract-binding protein [Zea mays]
gi|195649587|gb|ACG44261.1| polypyrimidine tract-binding protein [Zea mays]
Length = 487
Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 150/210 (71%), Positives = 184/210 (87%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFG+VHKI TFEK AGFQAL+Q++D TAS+AK +LDGRSIP YLLPE++ C LRI
Sbjct: 134 VFSAFGYVHKIATFEKAAGFQALIQYTDAATASAAKESLDGRSIPSYLLPEHVTSCCLRI 193
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
++SAH DL++KFQS+RSRDY NPYLP+ SA+D + Q +VG DG+++E + NVLLASIEN
Sbjct: 194 SFSAHKDLNIKFQSNRSRDYNNPYLPINYSAMDGTLQPAVGADGRQVEAQGNVLLASIEN 253
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVT+DVLH VFS+FG VQKIA+F+KNGG QALIQYPDV TA VAKE+LEGHCIYDGG
Sbjct: 254 MQYAVTVDVLHTVFSSFGSVQKIAIFEKNGGTQALIQYPDVSTAAVAKESLEGHCIYDGG 313
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
+CKLH+SYSRHTDL++K + D+SRDYT+P+
Sbjct: 314 YCKLHLSYSRHTDLNVKAHGDKSRDYTIPA 343
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 72/113 (63%), Gaps = 7/113 (6%)
Query: 133 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
E NVLL +IE +Q + VT+DV+HMVFSAFG V KIA F+K G QALIQY D TA
Sbjct: 108 ETAGNVLLVTIEGVQSSDVTIDVIHMVFSAFGYVHKIATFEKAAGFQALIQYTDAATASA 167
Query: 192 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
AKE+L+G I C L IS+S H DL+IK ++RSRDY P P+
Sbjct: 168 AKESLDGRSIPSYLLPEHVTSCCLRISFSAHKDLNIKFQSNRSRDYNNPYLPI 220
>gi|115453245|ref|NP_001050223.1| Os03g0376900 [Oryza sativa Japonica Group]
gi|18921326|gb|AAL82531.1|AC084766_17 putative polypyrimidine tract-binding protein [Oryza sativa
Japonica Group]
gi|108708433|gb|ABF96228.1| Polypyrimidine tract-binding protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113548694|dbj|BAF12137.1| Os03g0376900 [Oryza sativa Japonica Group]
gi|215692946|dbj|BAG88366.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192927|gb|EEC75354.1| hypothetical protein OsI_11790 [Oryza sativa Indica Group]
gi|222625006|gb|EEE59138.1| hypothetical protein OsJ_11035 [Oryza sativa Japonica Group]
Length = 464
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 161/213 (75%), Positives = 187/213 (87%), Gaps = 1/213 (0%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEK AGFQAL+Q++D TAS+A+ ALDGRSIPRYLLPE++ C LRI
Sbjct: 136 VFSAFGFVHKIATFEKAAGFQALIQYTDAATASAAREALDGRSIPRYLLPEHVTSCCLRI 195
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
++SAH DL++KFQSHRSRDYTNPYLPV SAID + Q +VG DG+K+E E NVLLASIEN
Sbjct: 196 SFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAID-TLQPAVGADGRKVEAEGNVLLASIEN 254
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVT+DVLH VFSAFG VQKIA+F+KNGG QALIQYPDV TA VAKEALEGHCIYDGG
Sbjct: 255 MQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDVTTASVAKEALEGHCIYDGG 314
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
+CKLH+SYSRHTDL++K ++D+SRDYT+P M
Sbjct: 315 YCKLHLSYSRHTDLNVKAHSDKSRDYTIPQGAM 347
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 78/131 (59%), Gaps = 11/131 (8%)
Query: 133 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
E NVLL +IE +Q VT+DV+H+VFSAFG V KIA F+K G QALIQY D TA
Sbjct: 110 ETAGNVLLVTIEGVQANDVTIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAATASA 169
Query: 192 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A+EAL+G I C L IS+S H DL+IK + RSRDYT P P+ +S
Sbjct: 170 AREALDGRSIPRYLLPEHVTSCCLRISFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAIDT 229
Query: 246 LGQQPVPMVGA 256
L P VGA
Sbjct: 230 LQ----PAVGA 236
>gi|225452861|ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 2
[Vitis vinifera]
Length = 420
Score = 330 bits (847), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 178/312 (57%), Positives = 214/312 (68%), Gaps = 19/312 (6%)
Query: 36 ITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSV 95
+ T E AL+QF+D ETASSA+NALDGRSIPRYLLPE++G C LRI+YSAHTDL++
Sbjct: 113 LVTIEGVEAGDALIQFTDAETASSARNALDGRSIPRYLLPEHVGSCHLRISYSAHTDLNI 172
Query: 96 KFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVL 155
KFQSHRSRDYTNPYLPV P+AI+ Q ++G DGKK EPESNVLLASIENMQYAVT+DVL
Sbjct: 173 KFQSHRSRDYTNPYLPVNPTAIEGIAQPALGPDGKKKEPESNVLLASIENMQYAVTVDVL 232
Query: 156 HMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSR 215
H VFSAFG VQKIA+F+KNGG+QALIQYPDV TA VAKEALEGHCIYDGG+CKLH+SYSR
Sbjct: 233 HTVFSAFGTVQKIAIFEKNGGMQALIQYPDVTTAAVAKEALEGHCIYDGGYCKLHLSYSR 292
Query: 216 HTDLSIKVNNDRSRDYTLPSTPMVNSQ-------PSILGQQPVPMVGATANQYNGAQFAP 268
HTDL++K ++DRSRDYT+P + ++ Q + + Q P T + A
Sbjct: 293 HTDLNVKAHSDRSRDYTIPDSGLLAVQQAPGHPGATTVWQNPQAAPLYTGHDAAAAAAVQ 352
Query: 269 PPPEQPMMH---QPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMGPGMMQMHMPGQSGM 325
P P M A+ A P + + +P PPGS P+ P + PG
Sbjct: 353 VPSWDPNMQAGRSTFASAASAFPSQPFASSSISAYP-APPGSSPLTPAVPPNVRPG---- 407
Query: 326 QHHHGAMPPPRP 337
GA PP RP
Sbjct: 408 ----GASPPGRP 415
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 53/83 (63%), Gaps = 6/83 (7%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFG V KI FEK G QAL+Q+ D TA+ AK AL+G I + G C L +
Sbjct: 235 VFSAFGTVQKIAIFEKNGGMQALIQYPDVTTAAVAKEALEGHCI------YDGGYCKLHL 288
Query: 86 TYSAHTDLSVKFQSHRSRDYTNP 108
+YS HTDL+VK S RSRDYT P
Sbjct: 289 SYSRHTDLNVKAHSDRSRDYTIP 311
>gi|164519910|gb|ABY59992.1| polypyrimidine tract-binding protein-like protein [Robinia
pseudoacacia]
Length = 240
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 173/237 (72%), Positives = 192/237 (81%), Gaps = 9/237 (3%)
Query: 102 SRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSA 161
SRDYTNPYLPVA SA++ SGQ+ VGLDGK+LE ESNVLLASIENMQYAVTLDVLHMVFSA
Sbjct: 2 SRDYTNPYLPVAQSAVEGSGQVMVGLDGKRLETESNVLLASIENMQYAVTLDVLHMVFSA 61
Query: 162 FGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
FGPVQKIAMFDKNGGLQALIQYPD+QTAVVAKEALEGHCIYDGGFCK HISYSRHTDLSI
Sbjct: 62 FGPVQKIAMFDKNGGLQALIQYPDIQTAVVAKEALEGHCIYDGGFCKPHISYSRHTDLSI 121
Query: 222 KVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTA 281
KVNNDRSRDYT+P+TP+VN+QPSI GQ VPM+G A QYNG+Q+ P E +M Q A
Sbjct: 122 KVNNDRSRDYTIPNTPVVNAQPSISGQHAVPMMGPPAQQYNGSQYT-PISEAALMPQSQA 180
Query: 282 AGWGA-VPPASQSM-PMMGNHPYMPPGSMP--MGPGMMQMHMPGQSGMQHHHGAMPP 334
GWG +P +QSM P M N+ YMPPG++P M PG M P S M H +PP
Sbjct: 181 GGWGTPLPAVAQSMPPQMHNNMYMPPGTLPQQMAPG---MQFPSHS-MPQHASTLPP 233
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 62/104 (59%), Gaps = 6/104 (5%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFG V KI F+K G QAL+Q+ D +TA AK AL+G I + G C I
Sbjct: 58 VFSAFGPVQKIAMFDKNGGLQALIQYPDIQTAVVAKEALEGHCI------YDGGFCKPHI 111
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDG 129
+YS HTDLS+K + RSRDYT P PV + SGQ +V + G
Sbjct: 112 SYSRHTDLSIKVNNDRSRDYTIPNTPVVNAQPSISGQHAVPMMG 155
>gi|357501941|ref|XP_003621259.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355496274|gb|AES77477.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 780
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 162/252 (64%), Positives = 193/252 (76%), Gaps = 22/252 (8%)
Query: 8 LSRKYLQWQLSASGERAHVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGR 67
L+ Y + S A VFSAFGFVHKI TFEKTAGFQAL+QF+D ETA+SA++ALDGR
Sbjct: 381 LTLPYELYTCDGSRSCAVVFSAFGFVHKIATFEKTAGFQALIQFTDAETAASARDALDGR 440
Query: 68 SIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSR----------------------DY 105
SIPRYLLPE++G C LRI+YSAH DL++KFQS+RS DY
Sbjct: 441 SIPRYLLPEHVGSCNLRISYSAHRDLNIKFQSNRSSLSICPGDDQVLLFYRLGVTEAWDY 500
Query: 106 TNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 165
TNP LPV SAI+ + Q ++G DGK++E ESNVLLASIENMQYAVT+DV++ VFSAFG V
Sbjct: 501 TNPMLPVNHSAIEGAAQPAIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTV 560
Query: 166 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN 225
QKIAMF+KNG QALIQYPDV TA A+EALEGHCIYDGG+CKLH+SYSRHTDL++K +
Sbjct: 561 QKIAMFEKNGQTQALIQYPDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFS 620
Query: 226 DRSRDYTLPSTP 237
D+SRDYT+P P
Sbjct: 621 DKSRDYTVPLVP 632
>gi|125526877|gb|EAY74991.1| hypothetical protein OsI_02889 [Oryza sativa Indica Group]
Length = 583
Score = 327 bits (837), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 176/300 (58%), Positives = 212/300 (70%), Gaps = 30/300 (10%)
Query: 16 QLSASGERAHVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLP 75
+++ + A VFSAFGFV KI TFEK +G+QAL+QF DTETASSAK ALD ++ +P
Sbjct: 155 RVNGEWKVAWVFSAFGFVQKIATFEKASGYQALIQFCDTETASSAKAALDVIGFQKFDVP 214
Query: 76 ENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 135
C LRI YSAHT L+VKFQSHRSRDYTNPYLPVAPSAID SG DGKK E E
Sbjct: 215 -----CLLRINYSAHTVLNVKFQSHRSRDYTNPYLPVAPSAIDGSGP-----DGKKQEAE 264
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
SNVLLAS+ENMQY VT+DVLH VFSAFG VQKIA+F+KN G QALIQYPD+QTAV AKEA
Sbjct: 265 SNVLLASVENMQYVVTIDVLHEVFSAFGFVQKIAIFEKNSGFQALIQYPDIQTAVAAKEA 324
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
LEGH IY+GG+CKLH+++SRHTDL++KVNN+R RDYT +T ++QPSILG QPV
Sbjct: 325 LEGHSIYEGGYCKLHLTFSRHTDLNVKVNNERGRDYTGGNTAPTSNQPSILGPQPV---- 380
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQ-SMPMMGNHPYMPPGSMPMGPGM 314
Y+GA + P++A VPP + + P +HPY +P P +
Sbjct: 381 -----YSGA----------YNNAPSSATGAVVPPGTTLTPPGAPSHPYTSSEPLPQTPAV 425
>gi|242040789|ref|XP_002467789.1| hypothetical protein SORBIDRAFT_01g034060 [Sorghum bicolor]
gi|241921643|gb|EER94787.1| hypothetical protein SORBIDRAFT_01g034060 [Sorghum bicolor]
Length = 486
Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 152/210 (72%), Positives = 184/210 (87%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFG+VHKI TFEK AGFQAL+Q++D TAS+A++ALDGRSIP YLLPE++ C LRI
Sbjct: 134 VFSAFGYVHKIATFEKAAGFQALIQYTDAATASAARDALDGRSIPSYLLPEHVTSCCLRI 193
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
++SAH DL++KFQS+RSRDY NPYLP+ SA+D + Q VG DG+K+E + NVLLASIEN
Sbjct: 194 SFSAHQDLNIKFQSNRSRDYNNPYLPINYSAMDGTLQPVVGADGRKVEAQGNVLLASIEN 253
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVT+DVLH VFS+FG VQKIA+F+KNGG QALIQYPDV TA VAKEALEGHCIYDGG
Sbjct: 254 MQYAVTVDVLHTVFSSFGTVQKIAIFEKNGGTQALIQYPDVNTAAVAKEALEGHCIYDGG 313
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
+CKLH+SYSRHTDL++K + D+SRDYT+P+
Sbjct: 314 YCKLHLSYSRHTDLNVKAHGDKSRDYTIPA 343
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 72/113 (63%), Gaps = 7/113 (6%)
Query: 133 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
E NVLL ++E +Q + VT+DV+HMVFSAFG V KIA F+K G QALIQY D TA
Sbjct: 108 ETAGNVLLVTMEGVQASDVTIDVIHMVFSAFGYVHKIATFEKAAGFQALIQYTDAATASA 167
Query: 192 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
A++AL+G I C L IS+S H DL+IK ++RSRDY P P+
Sbjct: 168 ARDALDGRSIPSYLLPEHVTSCCLRISFSAHQDLNIKFQSNRSRDYNNPYLPI 220
>gi|357501943|ref|XP_003621260.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355496275|gb|AES77478.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 618
Score = 314 bits (804), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 155/238 (65%), Positives = 183/238 (76%), Gaps = 22/238 (9%)
Query: 8 LSRKYLQWQLSASGERAHVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGR 67
L+ Y + S A VFSAFGFVHKI TFEKTAGFQAL+QF+D ETA+SA++ALDGR
Sbjct: 381 LTLPYELYTCDGSRSCAVVFSAFGFVHKIATFEKTAGFQALIQFTDAETAASARDALDGR 440
Query: 68 SIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSR----------------------DY 105
SIPRYLLPE++G C LRI+YSAH DL++KFQS+RS DY
Sbjct: 441 SIPRYLLPEHVGSCNLRISYSAHRDLNIKFQSNRSSLSICPGDDQVLLFYRLGVTEAWDY 500
Query: 106 TNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 165
TNP LPV SAI+ + Q ++G DGK++E ESNVLLASIENMQYAVT+DV++ VFSAFG V
Sbjct: 501 TNPMLPVNHSAIEGAAQPAIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTV 560
Query: 166 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKV 223
QKIAMF+KNG QALIQYPDV TA A+EALEGHCIYDGG+CKLH+SYSRHTDL++KV
Sbjct: 561 QKIAMFEKNGQTQALIQYPDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKV 618
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 50/78 (64%), Gaps = 6/78 (7%)
Query: 157 MVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCI------YDGGFCKLH 210
+VFSAFG V KIA F+K G QALIQ+ D +TA A++AL+G I G C L
Sbjct: 398 VVFSAFGFVHKIATFEKTAGFQALIQFTDAETAASARDALDGRSIPRYLLPEHVGSCNLR 457
Query: 211 ISYSRHTDLSIKVNNDRS 228
ISYS H DL+IK ++RS
Sbjct: 458 ISYSAHRDLNIKFQSNRS 475
>gi|357496461|ref|XP_003618519.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355493534|gb|AES74737.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 483
Score = 310 bits (794), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 176/348 (50%), Positives = 217/348 (62%), Gaps = 54/348 (15%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHK+ TFEKTAGFQAL+Q++D ETA+SAK++LDGRSIPRYLLPE++G C LRI
Sbjct: 133 VFSAFGFVHKLATFEKTAGFQALIQYTDAETAASAKDSLDGRSIPRYLLPEHVGACNLRI 192
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQL---------------------- 123
+YSAH DL++KFQS+RSRDYTNP LPV +AID++ Q+
Sbjct: 193 SYSAHRDLNIKFQSNRSRDYTNPMLPVNQAAIDSALQVYCSYFLPLYMFCIFLNVLTTLD 252
Query: 124 ---SVGLDGKKLEPESNVLLASIENMQYAVTLDVLH---------MVFSAFGPVQKIAMF 171
++G DGK+ E +SNVLLA+IENMQYAV LDVLH VFSAFG VQK+AMF
Sbjct: 253 VQPAIGPDGKRKEHKSNVLLATIENMQYAVPLDVLHSVRILFLIKRVFSAFGFVQKVAMF 312
Query: 172 DKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY 231
DKNG ALIQYPD+ A AKE LEGHCIYDGG+CKLH++YSRHTDL++K +D+SRDY
Sbjct: 313 DKNGHTHALIQYPDLTIAAAAKETLEGHCIYDGGYCKLHLTYSRHTDLNVKAFSDKSRDY 372
Query: 232 TLPSTPMVNSQPSI-LGQQPVPMVGATANQYNGA--QFAPPPPEQPMMHQPTAAGWGAVP 288
T+ PS+ Q P A Y+G+ Q P Q + Q + G P
Sbjct: 373 TV-------LDPSLHAAQAPAWQTTQAATMYSGSMGQMPSWDPNQQEVTQSYLSAPGTFP 425
Query: 289 PASQSMPMMGNHPYMPPGSMPMGPGMMQMHMPGQS------GMQHHHG 330
+ P P P ++P HMP S G Q H+G
Sbjct: 426 SGQAAPPF----PGYSPAAVPPAGASPHSHMPPSSFAGAFPGSQPHYG 469
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 137 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL +IE ++ V++DV+H+VFSAFG V K+A F+K G QALIQY D +TA AK++
Sbjct: 111 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKLATFEKTAGFQALIQYTDAETAASAKDS 170
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
L+G I G C L ISYS H DL+IK ++RSRDYT P P+
Sbjct: 171 LDGRSIPRYLLPEHVGACNLRISYSAHRDLNIKFQSNRSRDYTNPMLPV 219
>gi|186509647|ref|NP_001118547.1| polypyrimidine tract-binding protein 1 [Arabidopsis thaliana]
gi|332640096|gb|AEE73617.1| polypyrimidine tract-binding protein 1 [Arabidopsis thaliana]
Length = 370
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 160/276 (57%), Positives = 193/276 (69%), Gaps = 29/276 (10%)
Query: 36 ITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSV 95
+ TFE +ALVQF+D ETAS+A++ALDGRSIPRYLL ++G C+LR++YSAHTDL++
Sbjct: 113 LVTFEGVESHEALVQFTDVETASAARSALDGRSIPRYLLSAHVGSCSLRMSYSAHTDLNI 172
Query: 96 KFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVL 155
KFQSHRSRDYTNPYLPV +A+D S Q ++G DGKK+E +SNVLL IENMQYAVT+DVL
Sbjct: 173 KFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKKVESQSNVLLGLIENMQYAVTVDVL 232
Query: 156 HMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSR 215
H VFSA+G VQKIA+F+KNG QALIQY D+ TA +AKEALEGHCIYDGG+CKL +SYSR
Sbjct: 233 HTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEALEGHCIYDGGYCKLRLSYSR 292
Query: 216 HTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPM 275
HTDL++K +D+SRDYTLP S+L Q P V +A PP
Sbjct: 293 HTDLNVKAFSDKSRDYTLPDL-------SLLVAQKGPAVSGSA-----------PP---- 330
Query: 276 MHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMG 311
AGW P A G PYM P S P G
Sbjct: 331 ------AGWQN-PQAQSQYSGYGGSPYMYPSSDPNG 359
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSA+G V KI FEK QAL+Q+SD TA+ AK AL+G I + G C LR+
Sbjct: 235 VFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEALEGHCI------YDGGYCKLRL 288
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPV 112
+YS HTDL+VK S +SRDYT P L +
Sbjct: 289 SYSRHTDLNVKAFSDKSRDYTLPDLSL 315
>gi|356531752|ref|XP_003534440.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 3 [Glycine max]
Length = 467
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 142/207 (68%), Positives = 173/207 (83%)
Query: 36 ITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSV 95
+ T E AL+QF+D ETASSA++ALDGRSIPRYLLP ++G C LRI+YSAH DL++
Sbjct: 113 LVTIEGVEAGDALIQFTDAETASSARDALDGRSIPRYLLPAHVGSCNLRISYSAHKDLNI 172
Query: 96 KFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVL 155
KFQS+RSRDYTNP LPV +AI+ + Q +VG DGK+ EPESNVLLASIENMQYAVT+DVL
Sbjct: 173 KFQSNRSRDYTNPMLPVNYTAIEGAVQTAVGPDGKRKEPESNVLLASIENMQYAVTVDVL 232
Query: 156 HMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSR 215
H VFSAFG VQKIA+F+KNG QALIQYPD+ TA A+EALEGHCIYDGG+CKLH+SYSR
Sbjct: 233 HTVFSAFGTVQKIAIFEKNGQTQALIQYPDIITASAAREALEGHCIYDGGYCKLHLSYSR 292
Query: 216 HTDLSIKVNNDRSRDYTLPSTPMVNSQ 242
HTDL++K +D+SRDYT+P ++ +Q
Sbjct: 293 HTDLNVKAFSDKSRDYTVPDPSLLAAQ 319
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 53/83 (63%), Gaps = 6/83 (7%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFG V KI FEK QAL+Q+ D TAS+A+ AL+G I + G C L +
Sbjct: 235 VFSAFGTVQKIAIFEKNGQTQALIQYPDIITASAAREALEGHCI------YDGGYCKLHL 288
Query: 86 TYSAHTDLSVKFQSHRSRDYTNP 108
+YS HTDL+VK S +SRDYT P
Sbjct: 289 SYSRHTDLNVKAFSDKSRDYTVP 311
>gi|356568678|ref|XP_003552537.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 2 [Glycine max]
Length = 467
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/229 (64%), Positives = 182/229 (79%), Gaps = 3/229 (1%)
Query: 36 ITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSV 95
+ T E AL+QF+D ETASSA++ALDGRSIPRYLLP ++G C LRI+YSAH DL++
Sbjct: 113 LVTIEGVEAGDALIQFTDAETASSARDALDGRSIPRYLLPAHVGSCNLRISYSAHKDLNI 172
Query: 96 KFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVL 155
KFQS+RSRDYTNP LPV +AI+ + Q +VG DGK+ EP+SNVLLASIENMQYAVT+DVL
Sbjct: 173 KFQSNRSRDYTNPMLPVNYTAIEGAVQTAVGPDGKRKEPDSNVLLASIENMQYAVTVDVL 232
Query: 156 HMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSR 215
H VFSAFG VQKIA+F+KNG QALIQYPD+ TA A+EALEGHCIYDGG+CKLH+SYSR
Sbjct: 233 HTVFSAFGTVQKIAIFEKNGQTQALIQYPDIITASAAREALEGHCIYDGGYCKLHLSYSR 292
Query: 216 HTDLSIKVNNDRSRDYTLPSTPMVNSQ-PSILGQQP--VPMVGATANQY 261
HTDL++K +D+SRDYT+P ++ +Q P+ Q P PM +A Y
Sbjct: 293 HTDLNVKAFSDKSRDYTVPDPSLLAAQGPATAWQNPQAAPMYPGSAPAY 341
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 58/96 (60%), Gaps = 10/96 (10%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFG V KI FEK QAL+Q+ D TAS+A+ AL+G I + G C L +
Sbjct: 235 VFSAFGTVQKIAIFEKNGQTQALIQYPDIITASAAREALEGHCI------YDGGYCKLHL 288
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASG 121
+YS HTDL+VK S +SRDYT P PS + A G
Sbjct: 289 SYSRHTDLNVKAFSDKSRDYTVP----DPSLLAAQG 320
>gi|357147883|ref|XP_003574528.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 2 [Brachypodium distachyon]
Length = 313
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 139/182 (76%), Positives = 160/182 (87%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEK AGFQAL+Q++D TA AKN+LDGRSIPRYLLPE++ C LRI
Sbjct: 131 VFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPRYLLPEHVSICHLRI 190
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
T+SAH DL++KFQSHRSRDYTNPYLPV P+AI+ QL++G DGK EPESNVLLASIEN
Sbjct: 191 TFSAHKDLNIKFQSHRSRDYTNPYLPVNPTAIEGIAQLTLGPDGKVKEPESNVLLASIEN 250
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAV +DVLH VF++FG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALEGHCIYDGG
Sbjct: 251 MQYAVGVDVLHTVFNSFGTVQKIAMFEKNGGMQALIQYPDISTAAVAKQALEGHCIYDGG 310
Query: 206 FC 207
+C
Sbjct: 311 YC 312
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 70/109 (64%), Gaps = 7/109 (6%)
Query: 137 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL + E++Q V++DV+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 109 NVLLVTFEDVQPNDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 168
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
L+G I C L I++S H DL+IK + RSRDYT P P+
Sbjct: 169 LDGRSIPRYLLPEHVSICHLRITFSAHKDLNIKFQSHRSRDYTNPYLPV 217
>gi|414870439|tpg|DAA48996.1| TPA: hypothetical protein ZEAMMB73_491521 [Zea mays]
Length = 314
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 140/182 (76%), Positives = 160/182 (87%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEK AGFQAL+Q++D TA AKN+LDGRSIP+YLLPE++G C +RI
Sbjct: 132 VFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPKYLLPEHIGACHMRI 191
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
T+SAH DL++KFQSHRSRDYTNPYLPV +AI+ Q +VG DGK EPESNVLLASIEN
Sbjct: 192 TFSAHKDLNIKFQSHRSRDYTNPYLPVNQTAIEGIVQPTVGPDGKVKEPESNVLLASIEN 251
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVT+DVLH VFSAFG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALEGHCIYDGG
Sbjct: 252 MQYAVTVDVLHTVFSAFGAVQKIAMFEKNGGMQALIQYPDITTAAVAKQALEGHCIYDGG 311
Query: 206 FC 207
+C
Sbjct: 312 YC 313
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 75/118 (63%), Gaps = 9/118 (7%)
Query: 137 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL + E +Q VT++V+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 110 NVLLVTFEGVQPNDVTIEVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 169
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 247
L+G I G C + I++S H DL+IK + RSRDYT P P+ +Q +I G
Sbjct: 170 LDGRSIPKYLLPEHIGACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPV--NQTAIEG 225
>gi|255584813|ref|XP_002533124.1| polypyrimidine tract binding protein, putative [Ricinus communis]
gi|223527087|gb|EEF29269.1| polypyrimidine tract binding protein, putative [Ricinus communis]
Length = 483
Score = 300 bits (767), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 183/357 (51%), Positives = 212/357 (59%), Gaps = 55/357 (15%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYL-------LPENM 78
VFSAFGFVHKI TFEK AGFQAL+QF+D ETASSA+NALDGRSIP+Y L N
Sbjct: 132 VFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPKYSFFSLNLHLSLNS 191
Query: 79 GPCTLRITYSAH-TDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 137
R T S DL RDYTNPYLPV P+AI+ Q +VG DGKK EPESN
Sbjct: 192 ALLYSRFTQSKSLDDLQFLICLLNFRDYTNPYLPVNPTAIEGPVQPAVGPDGKKKEPESN 251
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VLLASIENMQYAVT+DV+H VFSAFG VQKIA+F+KNGG QAL+QYPDV TA VAKE LE
Sbjct: 252 VLLASIENMQYAVTVDVIHTVFSAFGTVQKIAIFEKNGGTQALVQYPDVATAAVAKETLE 311
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGAT 257
GHCIYDGG+CKLH+SYSRHTDL++K +D+SRDYT+P S+L VP V
Sbjct: 312 GHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIPDA-------SLLAAGQVPGVPTA 364
Query: 258 ANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQ------SMPMMG-NHPYMPPGSMP- 309
+ Q +P P+ +AA A PA Q SM G +P +PPG+ P
Sbjct: 365 PTMWQNPQASP---MYPVNSYASAAAVTAQVPAGQVPAWNPSMEAGGPAYPSVPPGTFPG 421
Query: 310 ---------------------------MGPGM--MQMHMPGQSGMQHHHGAMPPPRP 337
M PG+ M M PG GA PP +P
Sbjct: 422 QSYPAPPPTYVSAAMPVGSSPLTQGSPMSPGVGTMPMTHPGVQSNLRPGGASPPGQP 478
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 67/117 (57%), Gaps = 15/117 (12%)
Query: 137 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL +IE ++ V++DV+H+VFSAFG V KIA F+K G QALIQ+ D +TA A+ A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNA 169
Query: 196 LEGHCIYDGGF--CKLHIS------YSRHT------DLSIKVNNDRSRDYTLPSTPM 238
L+G I F LH+S YSR T DL + RDYT P P+
Sbjct: 170 LDGRSIPKYSFFSLNLHLSLNSALLYSRFTQSKSLDDLQFLICLLNFRDYTNPYLPV 226
>gi|20260638|gb|AAM13217.1| putative polypyrimidine tract-binding protein [Arabidopsis
thaliana]
gi|24899823|gb|AAN65126.1| putative polypyrimidine tract-binding protein [Arabidopsis
thaliana]
Length = 189
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 136/182 (74%), Positives = 160/182 (87%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEK AGFQALVQF+D ETAS+A++ALDGRSIPRYLL ++G C+LR+
Sbjct: 7 VFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPRYLLSAHVGSCSLRM 66
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
+YSAHTDL++KFQSHRSRDYTNPYLPV +A+D S Q ++G DGKK+E +SNVLL IEN
Sbjct: 67 SYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKKVESQSNVLLGLIEN 126
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVT+DVLH VFSA+G VQKIA+F+KNG QALIQY D+ TA +AKEALEGHCIYDGG
Sbjct: 127 MQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEALEGHCIYDGG 186
Query: 206 FC 207
+C
Sbjct: 187 YC 188
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 58/91 (63%), Gaps = 6/91 (6%)
Query: 154 VLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCI------YDGGFC 207
++ VFSAFG V KIA F+K G QAL+Q+ DV+TA A+ AL+G I G C
Sbjct: 3 IIGQVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPRYLLSAHVGSC 62
Query: 208 KLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
L +SYS HTDL+IK + RSRDYT P P+
Sbjct: 63 SLRMSYSAHTDLNIKFQSHRSRDYTNPYLPV 93
>gi|357119737|ref|XP_003561590.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
[Brachypodium distachyon]
Length = 522
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 137/180 (76%), Positives = 158/180 (87%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEK AGFQAL+Q++D TAS+A+ ALDGRSIPRYLLPE++ C LRI
Sbjct: 136 VFSAFGFVHKIATFEKAAGFQALIQYTDAPTASAAREALDGRSIPRYLLPEHVLSCHLRI 195
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
++SAH DL++KFQSHRSRDYTNPYLPV SAID++ Q +VG DG+++E E NVLLASIEN
Sbjct: 196 SFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAIDSTLQPAVGADGRRVEAEGNVLLASIEN 255
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAV++DVLH VFS FG VQKIA+F+KNGG QALIQYPDV TA VAKEALEGHCIYDGG
Sbjct: 256 MQYAVSVDVLHTVFSTFGTVQKIAIFEKNGGTQALIQYPDVTTATVAKEALEGHCIYDGG 315
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/131 (51%), Positives = 80/131 (61%), Gaps = 10/131 (7%)
Query: 133 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
E NVLL +IE +Q + VT+DV+H+VFSAFG V KIA F+K G QALIQY D TA
Sbjct: 110 ETAGNVLLVTIEGVQASDVTIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTASA 169
Query: 192 AKEALEGHCIYDGGF------CKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A+EAL+G I C L IS+S H DL+IK + RSRDYT P P VNS S
Sbjct: 170 AREALDGRSIPRYLLPEHVLSCHLRISFSAHKDLNIKFQSHRSRDYTNPYLP-VNS--SA 226
Query: 246 LGQQPVPMVGA 256
+ P VGA
Sbjct: 227 IDSTLQPAVGA 237
>gi|238013298|gb|ACR37684.1| unknown [Zea mays]
gi|414867005|tpg|DAA45562.1| TPA: hypothetical protein ZEAMMB73_334584 [Zea mays]
Length = 317
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 132/182 (72%), Positives = 159/182 (87%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFG+VHKI TFEK AGFQAL+Q++D +TAS+A+ ALDGRSIP YLLPE++ C LRI
Sbjct: 134 VFSAFGYVHKIATFEKAAGFQALIQYTDADTASAAREALDGRSIPSYLLPEHVTSCCLRI 193
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
++SAH DL++KFQS+RSRDY NPYLP+ SA+D + Q +VG DG+K+E + NVLLASIEN
Sbjct: 194 SFSAHKDLNIKFQSNRSRDYNNPYLPINYSAMDGTLQPAVGSDGRKVEAQGNVLLASIEN 253
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAV++DVLH VFS+FG VQKIA+F+KNGG QALIQYPDV TA VAKEALEGHCIYDGG
Sbjct: 254 MQYAVSVDVLHTVFSSFGTVQKIAIFEKNGGTQALIQYPDVNTAAVAKEALEGHCIYDGG 313
Query: 206 FC 207
+C
Sbjct: 314 YC 315
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 72/113 (63%), Gaps = 7/113 (6%)
Query: 133 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
E NVLL +IE +Q + VT+DV+HMVFSAFG V KIA F+K G QALIQY D TA
Sbjct: 108 ETAGNVLLVTIEGVQASDVTIDVIHMVFSAFGYVHKIATFEKAAGFQALIQYTDADTASA 167
Query: 192 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
A+EAL+G I C L IS+S H DL+IK ++RSRDY P P+
Sbjct: 168 AREALDGRSIPSYLLPEHVTSCCLRISFSAHKDLNIKFQSNRSRDYNNPYLPI 220
>gi|108708434|gb|ABF96229.1| Polypyrimidine tract-binding protein, putative, expressed [Oryza
sativa Japonica Group]
Length = 318
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 141/182 (77%), Positives = 160/182 (87%), Gaps = 1/182 (0%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEK AGFQAL+Q++D TAS+A+ ALDGRSIPRYLLPE++ C LRI
Sbjct: 136 VFSAFGFVHKIATFEKAAGFQALIQYTDAATASAAREALDGRSIPRYLLPEHVTSCCLRI 195
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
++SAH DL++KFQSHRSRDYTNPYLPV SAID + Q +VG DG+K+E E NVLLASIEN
Sbjct: 196 SFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAID-TLQPAVGADGRKVEAEGNVLLASIEN 254
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAVT+DVLH VFSAFG VQKIA+F+KNGG QALIQYPDV TA VAKEALEGHCIYDGG
Sbjct: 255 MQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDVTTASVAKEALEGHCIYDGG 314
Query: 206 FC 207
+C
Sbjct: 315 YC 316
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 78/131 (59%), Gaps = 11/131 (8%)
Query: 133 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
E NVLL +IE +Q VT+DV+H+VFSAFG V KIA F+K G QALIQY D TA
Sbjct: 110 ETAGNVLLVTIEGVQANDVTIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAATASA 169
Query: 192 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A+EAL+G I C L IS+S H DL+IK + RSRDYT P P+ +S
Sbjct: 170 AREALDGRSIPRYLLPEHVTSCCLRISFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAIDT 229
Query: 246 LGQQPVPMVGA 256
L P VGA
Sbjct: 230 LQ----PAVGA 236
>gi|326506386|dbj|BAJ86511.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 313
Score = 286 bits (732), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 135/182 (74%), Positives = 155/182 (85%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEK AGFQAL+Q++D TA AKN+LDGRSIPRYLL +++ C LRI
Sbjct: 131 VFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPRYLLADHVSICHLRI 190
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
T+SAH DL++KFQSHRSRDYTNPYLPV P+AI+ Q +G DG EPESNVLLASIEN
Sbjct: 191 TFSAHKDLNIKFQSHRSRDYTNPYLPVNPTAIEGITQPILGSDGMIKEPESNVLLASIEN 250
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQYAV +DVLH VFS+FG VQKIAMF+KNGG+QALIQYPD+ A VAK+ALEGHCIYDGG
Sbjct: 251 MQYAVGVDVLHTVFSSFGAVQKIAMFEKNGGMQALIQYPDITPAGVAKQALEGHCIYDGG 310
Query: 206 FC 207
+C
Sbjct: 311 YC 312
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 78/131 (59%), Gaps = 10/131 (7%)
Query: 133 EPESNVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
+ NVLL + E +Q V++DV+H+VFSAFG V KIA F+K G QALIQY D TA+
Sbjct: 105 DSSGNVLLVTFEGVQPNDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALE 164
Query: 192 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AK +L+G I C L I++S H DL+IK + RSRDYT P P+ P+
Sbjct: 165 AKNSLDGRSIPRYLLADHVSICHLRITFSAHKDLNIKFQSHRSRDYTNPYLPV---NPTA 221
Query: 246 LGQQPVPMVGA 256
+ P++G+
Sbjct: 222 IEGITQPILGS 232
>gi|356531750|ref|XP_003534439.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 2 [Glycine max]
Length = 505
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 142/226 (62%), Positives = 170/226 (75%), Gaps = 9/226 (3%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPR-----YLLPENMGP 80
VFSAFGFVHKI TFEKTAGFQAL+QF+D ETASSA++ALDGRSIPR P + P
Sbjct: 132 VFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDALDGRSIPRQVALFVFFPYSSTP 191
Query: 81 CTLRI----TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPES 136
+ + + T L DYTNP LPV +AI+ + Q +VG DGK+ EPES
Sbjct: 192 SIILVIACQVINLLTHLFFGICLMHFLDYTNPMLPVNYTAIEGAVQTAVGPDGKRKEPES 251
Query: 137 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 196
NVLLASIENMQYAVT+DVLH VFSAFG VQKIA+F+KNG QALIQYPD+ TA A+EAL
Sbjct: 252 NVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDIITASAAREAL 311
Query: 197 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ 242
EGHCIYDGG+CKLH+SYSRHTDL++K +D+SRDYT+P ++ +Q
Sbjct: 312 EGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPDPSLLAAQ 357
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 137 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL +IE ++ V++DV+H+VFSAFG V KIA F+K G QALIQ+ D +TA A++A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDA 169
Query: 196 LEGHCI 201
L+G I
Sbjct: 170 LDGRSI 175
>gi|207174028|gb|ACI23510.1| putative polypyrimidine tract-binding protein 2 [Triticum
monococcum]
gi|207174032|gb|ACI23512.1| putative polypyrimidine tract-binding protein 2 [Triticum urartu]
Length = 200
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 132/193 (68%), Positives = 158/193 (81%), Gaps = 5/193 (2%)
Query: 72 YLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKK 131
YLLPE G CTLRI YSAH+ L+VKFQSHRSRDYTNPYLP+APSAID SG +DGKK
Sbjct: 1 YLLPELDGSCTLRINYSAHSVLNVKFQSHRSRDYTNPYLPLAPSAIDGSG-----VDGKK 55
Query: 132 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
EPESNVLLAS+ENMQY VT+D LH VFSAFG VQKIA+F+KN G ALIQYPD+QTAV
Sbjct: 56 EEPESNVLLASVENMQYIVTIDALHEVFSAFGFVQKIAIFEKNSGFHALIQYPDIQTAVK 115
Query: 192 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPV 251
A+EALEGH IY+GG+CKLH+++SRHTDL++++NN+R RDYT ++ N +PSILG QP+
Sbjct: 116 AREALEGHSIYEGGYCKLHLAFSRHTDLNVRINNERGRDYTGGNSAPANHEPSILGPQPM 175
Query: 252 PMVGATANQYNGA 264
G+TA Y+ A
Sbjct: 176 LAAGSTAPPYSSA 188
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 52/81 (64%), Gaps = 6/81 (7%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFV KI FEK +GF AL+Q+ D +TA A+ AL+G SI G C L +
Sbjct: 82 VFSAFGFVQKIAIFEKNSGFHALIQYPDIQTAVKAREALEGHSI------YEGGYCKLHL 135
Query: 86 TYSAHTDLSVKFQSHRSRDYT 106
+S HTDL+V+ + R RDYT
Sbjct: 136 AFSRHTDLNVRINNERGRDYT 156
>gi|207174030|gb|ACI23511.1| putative polypyrimidine tract-binding protein 2 [Aegilops
speltoides]
Length = 200
Score = 273 bits (698), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 131/193 (67%), Positives = 157/193 (81%), Gaps = 5/193 (2%)
Query: 72 YLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKK 131
YLLPE G CTLRI YSAH+ L+VKFQSHRSRDYTNPYLP+APSAID SG +DGKK
Sbjct: 1 YLLPELDGSCTLRINYSAHSVLNVKFQSHRSRDYTNPYLPLAPSAIDGSG-----VDGKK 55
Query: 132 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
E ESNVLLAS+ENMQY VT+D LH VFSAFG VQKIA+F+KN G ALIQYPD+QTAV
Sbjct: 56 EEAESNVLLASVENMQYIVTIDALHEVFSAFGFVQKIAIFEKNSGFHALIQYPDIQTAVK 115
Query: 192 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPV 251
A+EALEGH IY+GG+CKLH+++SRHTDL++++NN+R RDYT ++ N +PSILG QP+
Sbjct: 116 AREALEGHSIYEGGYCKLHLAFSRHTDLNVRINNERGRDYTGGNSAPANHEPSILGPQPI 175
Query: 252 PMVGATANQYNGA 264
G+TA Y+ A
Sbjct: 176 LAAGSTAPPYSSA 188
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 52/81 (64%), Gaps = 6/81 (7%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFV KI FEK +GF AL+Q+ D +TA A+ AL+G SI G C L +
Sbjct: 82 VFSAFGFVQKIAIFEKNSGFHALIQYPDIQTAVKAREALEGHSI------YEGGYCKLHL 135
Query: 86 TYSAHTDLSVKFQSHRSRDYT 106
+S HTDL+V+ + R RDYT
Sbjct: 136 AFSRHTDLNVRINNERGRDYT 156
>gi|207174026|gb|ACI23509.1| putative polypyrimidine tract-binding protein 2 [Secale cereale]
Length = 200
Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 131/193 (67%), Positives = 158/193 (81%), Gaps = 5/193 (2%)
Query: 72 YLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKK 131
YLLPE G CTLRI YSAH+ L+VKFQSHRSRDYTNPYLP+APSAID SG +DGKK
Sbjct: 1 YLLPELDGSCTLRINYSAHSVLNVKFQSHRSRDYTNPYLPLAPSAIDGSG-----VDGKK 55
Query: 132 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
E ESNVLLAS+ENMQY VT+D LH VFSA+G VQKIA+F+KN G ALIQYPD+QTAV
Sbjct: 56 EEAESNVLLASVENMQYIVTIDALHEVFSAYGFVQKIAIFEKNSGFHALIQYPDIQTAVK 115
Query: 192 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPV 251
A+EALEGH IY+GG+CKLH+++SRHTDL++++NN+R RDYT ++ N +PSILG QP+
Sbjct: 116 AREALEGHSIYEGGYCKLHLAFSRHTDLNVRINNERGRDYTGGNSAPANHEPSILGPQPM 175
Query: 252 PMVGATANQYNGA 264
VG+TA Y+ A
Sbjct: 176 LPVGSTAPPYSSA 188
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 6/81 (7%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSA+GFV KI FEK +GF AL+Q+ D +TA A+ AL+G SI G C L +
Sbjct: 82 VFSAYGFVQKIAIFEKNSGFHALIQYPDIQTAVKAREALEGHSI------YEGGYCKLHL 135
Query: 86 TYSAHTDLSVKFQSHRSRDYT 106
+S HTDL+V+ + R RDYT
Sbjct: 136 AFSRHTDLNVRINNERGRDYT 156
>gi|356541547|ref|XP_003539236.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
[Glycine max]
Length = 447
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 134/218 (61%), Positives = 168/218 (77%), Gaps = 12/218 (5%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFS FGFV KI+TFEK A FQA+VQF D +TASSAK+ALDG+SIPRYLLP + C LRI
Sbjct: 135 VFSEFGFVQKISTFEKNACFQAMVQFPDVKTASSAKDALDGKSIPRYLLPNYVCDCNLRI 194
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP-ESNVLLASIE 144
TYSAH DL++KFQS+R+RDYTNP LPV ++ID + ++P E++VL AS E
Sbjct: 195 TYSAHQDLTIKFQSNRTRDYTNPTLPVNQTSID-----------RAIQPFENHVLWASFE 243
Query: 145 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 204
NMQY VT+DVLH VFS +G VQKI++F+KNG ALIQYPD+ TA AK+AL GHCIYDG
Sbjct: 244 NMQYDVTVDVLHSVFSEYGTVQKISIFEKNGQTHALIQYPDIATATAAKKALMGHCIYDG 303
Query: 205 GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ 242
G CKL +SYS HTD+++K ++D+SRDYT+P+ + Q
Sbjct: 304 GCCKLRLSYSHHTDINVKGSSDKSRDYTMPNHGVFEEQ 341
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 80/119 (67%), Gaps = 11/119 (9%)
Query: 135 ESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 193
+ N+L+ ++E +Q V +DV+H+VFS FG VQKI+ F+KN QA++Q+PDV+TA AK
Sbjct: 111 KGNILIVTMEGIQAGDVGIDVIHLVFSEFGFVQKISTFEKNACFQAMVQFPDVKTASSAK 170
Query: 194 EALEGHCI-------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
+AL+G I Y C L I+YS H DL+IK ++R+RDYT P+ P+ +Q SI
Sbjct: 171 DALDGKSIPRYLLPNYVCD-CNLRITYSAHQDLTIKFQSNRTRDYTNPTLPV--NQTSI 226
>gi|414870437|tpg|DAA48994.1| TPA: hypothetical protein ZEAMMB73_491521 [Zea mays]
Length = 227
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 122/160 (76%), Positives = 140/160 (87%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEK AGFQAL+Q++D TA AKN+LDGRSIP+YLLPE++G C +RI
Sbjct: 63 VFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPKYLLPEHIGACHMRI 122
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
T+SAH DL++KFQSHRSRDYTNPYLPV +AI+ Q +VG DGK EPESNVLLASIEN
Sbjct: 123 TFSAHKDLNIKFQSHRSRDYTNPYLPVNQTAIEGIVQPTVGPDGKVKEPESNVLLASIEN 182
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD 185
MQYAVT+DVLH VFSAFG VQKIAMF+KNGG+QALIQYP+
Sbjct: 183 MQYAVTVDVLHTVFSAFGAVQKIAMFEKNGGMQALIQYPE 222
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 75/118 (63%), Gaps = 9/118 (7%)
Query: 137 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL + E +Q VT++V+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 41 NVLLVTFEGVQPNDVTIEVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 100
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 247
L+G I G C + I++S H DL+IK + RSRDYT P P+ +Q +I G
Sbjct: 101 LDGRSIPKYLLPEHIGACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPV--NQTAIEG 156
>gi|356568680|ref|XP_003552538.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 3 [Glycine max]
Length = 304
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 122/161 (75%), Positives = 142/161 (88%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEKTAGFQAL+QF+D ETASSA++ALDGRSIPRYLLP ++G C LRI
Sbjct: 132 VFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDALDGRSIPRYLLPAHVGSCNLRI 191
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
+YSAH DL++KFQS+RSRDYTNP LPV +AI+ + Q +VG DGK+ EP+SNVLLASIEN
Sbjct: 192 SYSAHKDLNIKFQSNRSRDYTNPMLPVNYTAIEGAVQTAVGPDGKRKEPDSNVLLASIEN 251
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 186
MQYAVT+DVLH VFSAFG VQKIA+F+KNG QALIQYP +
Sbjct: 252 MQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPGI 292
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 137 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL +IE ++ V++DV+H+VFSAFG V KIA F+K G QALIQ+ D +TA A++A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDA 169
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
L+G I G C L ISYS H DL+IK ++RSRDYT P P+
Sbjct: 170 LDGRSIPRYLLPAHVGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPV 218
>gi|219363125|ref|NP_001137030.1| uncharacterized protein LOC100217199 [Zea mays]
gi|194698066|gb|ACF83117.1| unknown [Zea mays]
gi|414870440|tpg|DAA48997.1| TPA: hypothetical protein ZEAMMB73_491521 [Zea mays]
Length = 296
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 122/160 (76%), Positives = 140/160 (87%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEK AGFQAL+Q++D TA AKN+LDGRSIP+YLLPE++G C +RI
Sbjct: 132 VFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPKYLLPEHIGACHMRI 191
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
T+SAH DL++KFQSHRSRDYTNPYLPV +AI+ Q +VG DGK EPESNVLLASIEN
Sbjct: 192 TFSAHKDLNIKFQSHRSRDYTNPYLPVNQTAIEGIVQPTVGPDGKVKEPESNVLLASIEN 251
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD 185
MQYAVT+DVLH VFSAFG VQKIAMF+KNGG+QALIQYP+
Sbjct: 252 MQYAVTVDVLHTVFSAFGAVQKIAMFEKNGGMQALIQYPE 291
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 75/118 (63%), Gaps = 9/118 (7%)
Query: 137 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL + E +Q VT++V+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 110 NVLLVTFEGVQPNDVTIEVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 169
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 247
L+G I G C + I++S H DL+IK + RSRDYT P P+ +Q +I G
Sbjct: 170 LDGRSIPKYLLPEHIGACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPV--NQTAIEG 225
>gi|195622556|gb|ACG33108.1| hypothetical protein [Zea mays]
Length = 276
Score = 257 bits (656), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 124/169 (73%), Positives = 144/169 (85%), Gaps = 3/169 (1%)
Query: 83 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 142
+RIT+SAH DL++KFQSHRSRDYTNPYLPV +AI+ Q +VG DGK EPESNVLLAS
Sbjct: 1 MRITFSAHKDLNIKFQSHRSRDYTNPYLPVNQTAIEGIVQPTVGPDGKVKEPESNVLLAS 60
Query: 143 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 202
IENMQYAVT+DVLH VFSAFG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALEGHCIY
Sbjct: 61 IENMQYAVTVDVLHTVFSAFGAVQKIAMFEKNGGMQALIQYPDITTAAVAKQALEGHCIY 120
Query: 203 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPV 251
DGG+CKLH+SYSRHTDL++K +++RSRDYTL S P V Q + Q PV
Sbjct: 121 DGGYCKLHLSYSRHTDLNVKAHDERSRDYTL-SDPNVQLQAA--AQTPV 166
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 51/81 (62%), Gaps = 6/81 (7%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFG V KI FEK G QAL+Q+ D TA+ AK AL+G I + G C L +
Sbjct: 76 VFSAFGAVQKIAMFEKNGGMQALIQYPDITTAAVAKQALEGHCI------YDGGYCKLHL 129
Query: 86 TYSAHTDLSVKFQSHRSRDYT 106
+YS HTDL+VK RSRDYT
Sbjct: 130 SYSRHTDLNVKAHDERSRDYT 150
>gi|194695192|gb|ACF81680.1| unknown [Zea mays]
gi|414870435|tpg|DAA48992.1| TPA: hypothetical protein ZEAMMB73_491521 [Zea mays]
gi|414870436|tpg|DAA48993.1| TPA: hypothetical protein ZEAMMB73_491521 [Zea mays]
Length = 276
Score = 257 bits (656), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 124/169 (73%), Positives = 144/169 (85%), Gaps = 3/169 (1%)
Query: 83 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 142
+RIT+SAH DL++KFQSHRSRDYTNPYLPV +AI+ Q +VG DGK EPESNVLLAS
Sbjct: 1 MRITFSAHKDLNIKFQSHRSRDYTNPYLPVNQTAIEGIVQPTVGPDGKVKEPESNVLLAS 60
Query: 143 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 202
IENMQYAVT+DVLH VFSAFG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALEGHCIY
Sbjct: 61 IENMQYAVTVDVLHTVFSAFGAVQKIAMFEKNGGMQALIQYPDITTAAVAKQALEGHCIY 120
Query: 203 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPV 251
DGG+CKLH+SYSRHTDL++K +++RSRDYTL S P V Q + Q PV
Sbjct: 121 DGGYCKLHLSYSRHTDLNVKAHDERSRDYTL-SDPNVQLQAA--AQTPV 166
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 51/81 (62%), Gaps = 6/81 (7%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFG V KI FEK G QAL+Q+ D TA+ AK AL+G I + G C L +
Sbjct: 76 VFSAFGAVQKIAMFEKNGGMQALIQYPDITTAAVAKQALEGHCI------YDGGYCKLHL 129
Query: 86 TYSAHTDLSVKFQSHRSRDYT 106
+YS HTDL+VK RSRDYT
Sbjct: 130 SYSRHTDLNVKAHDERSRDYT 150
>gi|255636160|gb|ACU18422.1| unknown [Glycine max]
Length = 304
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 121/162 (74%), Positives = 141/162 (87%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEKTAGFQAL+QF+D ETASSA++ALDGRSIPRYLLP ++G C LRI
Sbjct: 132 VFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDALDGRSIPRYLLPAHVGSCNLRI 191
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
+YSAH DL++KFQS+RS DYTNP LPV +AI+ + Q +VG DGK+ EP+SNVLLASIEN
Sbjct: 192 SYSAHKDLNIKFQSNRSGDYTNPMLPVNYTAIEGAVQTAVGPDGKRKEPDSNVLLASIEN 251
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
MQYAVT+DVLH VFSAFG VQKIA+F+KNG QALIQYP +
Sbjct: 252 MQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPGIN 293
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 72/109 (66%), Gaps = 7/109 (6%)
Query: 137 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL +IE ++ V++DV+H+VFSAFG V KIA F+K G QALIQ+ D +TA A++A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDA 169
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
L+G I G C L ISYS H DL+IK ++RS DYT P P+
Sbjct: 170 LDGRSIPRYLLPAHVGSCNLRISYSAHKDLNIKFQSNRSGDYTNPMLPV 218
>gi|384245764|gb|EIE19256.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 443
Score = 247 bits (631), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 152/210 (72%), Gaps = 4/210 (1%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFG V KI TFEK GFQALVQ++D ETA + ALDGR IP++LL + P +L+I
Sbjct: 131 VFSAFGLVQKIATFEKGQGFQALVQYADAETAEQVRLALDGRHIPKHLLNDTPNPPSLKI 190
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVG--LDGKKLEPESNVLLASI 143
TYS HTDL+VKFQSHRSRDYTN YLP AP+ D + L + + G L E NVLL I
Sbjct: 191 TYSQHTDLNVKFQSHRSRDYTNLYLPAAPAGGDPNLALGIQAPISGNPL--EGNVLLCQI 248
Query: 144 ENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYD 203
EN Y V +D L+ VFS +G VQKIA+FDKNG QALIQYPD +A AK ALEGH IYD
Sbjct: 249 ENQAYPVNVDALNTVFSPYGFVQKIAIFDKNGQSQALIQYPDPLSATNAKSALEGHAIYD 308
Query: 204 GGFCKLHISYSRHTDLSIKVNNDRSRDYTL 233
GG+ +L ISYS H +L++K NNDRS DYTL
Sbjct: 309 GGYNRLKISYSVHRNLNVKANNDRSCDYTL 338
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 75/119 (63%), Gaps = 11/119 (9%)
Query: 130 KKLEPESNVLLASIENM--QYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+ E NVLL S+EN+ VTLD LH+VFSAFG VQKIA F+K G QAL+QY D +
Sbjct: 101 RSAEQGGNVLLVSLENLAPDMNVTLDTLHLVFSAFGLVQKIATFEKGQGFQALVQYADAE 160
Query: 188 TAVVAKEALEG-----HCIYDG-GFCKLHISYSRHTDLSIKVNNDRSRDYT---LPSTP 237
TA + AL+G H + D L I+YS+HTDL++K + RSRDYT LP+ P
Sbjct: 161 TAEQVRLALDGRHIPKHLLNDTPNPPSLKITYSQHTDLNVKFQSHRSRDYTNLYLPAAP 219
>gi|108708435|gb|ABF96230.1| Polypyrimidine tract-binding protein, putative, expressed [Oryza
sativa Japonica Group]
Length = 300
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/161 (75%), Positives = 141/161 (87%), Gaps = 1/161 (0%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEK AGFQAL+Q++D TAS+A+ ALDGRSIPRYLLPE++ C LRI
Sbjct: 136 VFSAFGFVHKIATFEKAAGFQALIQYTDAATASAAREALDGRSIPRYLLPEHVTSCCLRI 195
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
++SAH DL++KFQSHRSRDYTNPYLPV SAID + Q +VG DG+K+E E NVLLASIEN
Sbjct: 196 SFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAID-TLQPAVGADGRKVEAEGNVLLASIEN 254
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 186
MQYAVT+DVLH VFSAFG VQKIA+F+KNGG QALIQYP++
Sbjct: 255 MQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPEI 295
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 78/131 (59%), Gaps = 11/131 (8%)
Query: 133 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
E NVLL +IE +Q VT+DV+H+VFSAFG V KIA F+K G QALIQY D TA
Sbjct: 110 ETAGNVLLVTIEGVQANDVTIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAATASA 169
Query: 192 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A+EAL+G I C L IS+S H DL+IK + RSRDYT P P+ +S
Sbjct: 170 AREALDGRSIPRYLLPEHVTSCCLRISFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAIDT 229
Query: 246 LGQQPVPMVGA 256
L P VGA
Sbjct: 230 LQ----PAVGA 236
>gi|357501945|ref|XP_003621261.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355496276|gb|AES77479.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 592
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/202 (61%), Positives = 148/202 (73%), Gaps = 22/202 (10%)
Query: 8 LSRKYLQWQLSASGERAHVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGR 67
L+ Y + S A VFSAFGFVHKI TFEKTAGFQAL+QF+D ETA+SA++ALDGR
Sbjct: 381 LTLPYELYTCDGSRSCAVVFSAFGFVHKIATFEKTAGFQALIQFTDAETAASARDALDGR 440
Query: 68 SIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSR----------------------DY 105
SIPRYLLPE++G C LRI+YSAH DL++KFQS+RS DY
Sbjct: 441 SIPRYLLPEHVGSCNLRISYSAHRDLNIKFQSNRSSLSICPGDDQVLLFYRLGVTEAWDY 500
Query: 106 TNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 165
TNP LPV SAI+ + Q ++G DGK++E ESNVLLASIENMQYAVT+DV++ VFSAFG V
Sbjct: 501 TNPMLPVNHSAIEGAAQPAIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTV 560
Query: 166 QKIAMFDKNGGLQALIQYPDVQ 187
QKIAMF+KNG QALIQYP +
Sbjct: 561 QKIAMFEKNGQTQALIQYPGIN 582
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 50/78 (64%), Gaps = 6/78 (7%)
Query: 157 MVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCI------YDGGFCKLH 210
+VFSAFG V KIA F+K G QALIQ+ D +TA A++AL+G I G C L
Sbjct: 398 VVFSAFGFVHKIATFEKTAGFQALIQFTDAETAASARDALDGRSIPRYLLPEHVGSCNLR 457
Query: 211 ISYSRHTDLSIKVNNDRS 228
ISYS H DL+IK ++RS
Sbjct: 458 ISYSAHRDLNIKFQSNRS 475
>gi|336244421|gb|AEI28160.1| polypyrimidine tract-binding protein 1 [Lobularia maritima]
Length = 126
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 94/126 (74%), Positives = 111/126 (88%)
Query: 83 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 142
LR++YSAHTDL++KFQSHRSRDYTNPYLPV +A+D S Q ++G DGKK+E +SNVLLA
Sbjct: 1 LRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNHTAMDGSMQPALGADGKKVETQSNVLLAL 60
Query: 143 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 202
IENMQYAVT+DVLH VFSA+G VQKIA+F+KNG QALIQY D+ TA +AKEALEGHCIY
Sbjct: 61 IENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYADIATAAIAKEALEGHCIY 120
Query: 203 DGGFCK 208
DGG+CK
Sbjct: 121 DGGYCK 126
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 30/44 (68%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSI 69
VFSA+G V KI FEK QAL+Q++D TA+ AK AL+G I
Sbjct: 76 VFSAYGTVQKIAIFEKNGSTQALIQYADIATAAIAKEALEGHCI 119
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 209 LHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
L +SYS HTDL+IK + RSRDYT P P+
Sbjct: 1 LRMSYSAHTDLNIKFQSHRSRDYTNPYLPV 30
>gi|313757918|gb|ADR78667.1| polypyrimidine tract-binding protein 1 [Matthiola longipetala
subsp. bicornis]
Length = 125
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/124 (74%), Positives = 108/124 (87%)
Query: 81 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLL 140
C LR++YSAHTDL++KFQSHRSRDYTNPYLPV +A+D S Q ++G DGKK+E +SNVLL
Sbjct: 2 CNLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNHTAMDGSMQPALGADGKKVETQSNVLL 61
Query: 141 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 200
A IENMQYAVT+DVLH VFSA+G VQKIA+F+KNG QALIQY D+ TA +AKEALEGHC
Sbjct: 62 ALIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEALEGHC 121
Query: 201 IYDG 204
IYDG
Sbjct: 122 IYDG 125
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 30/44 (68%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSI 69
VFSA+G V KI FEK QAL+Q+SD TA+ AK AL+G I
Sbjct: 79 VFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEALEGHCI 122
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%)
Query: 207 CKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
C L +SYS HTDL+IK + RSRDYT P P+
Sbjct: 2 CNLRMSYSAHTDLNIKFQSHRSRDYTNPYLPV 33
>gi|165940573|gb|ABY75231.1| polypyrimidine tract-binding protein-like protein [Salvia
officinalis]
Length = 181
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/124 (75%), Positives = 108/124 (87%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFGFVHKI TFEK AGFQAL+Q+SD +TAS+A+++LDGRSIPRYLLP ++ C LRI
Sbjct: 58 VFSAFGFVHKIATFEKAAGFQALIQYSDVQTASTARDSLDGRSIPRYLLPSHVSECYLRI 117
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
+YSAHTDL++KFQSHRSRDYTNP+LPV P+A+D Q VG DGKK E ESNVLLASIEN
Sbjct: 118 SYSAHTDLNIKFQSHRSRDYTNPHLPVNPTAMDGLLQPVVGPDGKKKEFESNVLLASIEN 177
Query: 146 MQYA 149
MQYA
Sbjct: 178 MQYA 181
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 80/126 (63%), Gaps = 10/126 (7%)
Query: 137 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
NVLL +IE ++ V++DV+H+VFSAFG V KIA F+K G QALIQY DVQTA A+++
Sbjct: 36 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYSDVQTASTARDS 95
Query: 196 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQ 249
L+G I C L ISYS HTDL+IK + RSRDYT P P+ P+ +
Sbjct: 96 LDGRSIPRYLLPSHVSECYLRISYSAHTDLNIKFQSHRSRDYTNPHLPV---NPTAMDGL 152
Query: 250 PVPMVG 255
P+VG
Sbjct: 153 LQPVVG 158
>gi|313757916|gb|ADR78666.1| polypyrimidine tract-binding protein 1 [Iberis amara]
Length = 120
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 88/120 (73%), Positives = 105/120 (87%)
Query: 84 RITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASI 143
R++YSAHTDL++KFQSHRSRDYTNPYLPV +A+D S Q ++G DGKK+E +SNVLLA I
Sbjct: 1 RMSYSAHTDLNIKFQSHRSRDYTNPYLPVNHTAMDGSMQPALGADGKKIETQSNVLLALI 60
Query: 144 ENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYD 203
ENMQYAVT+DVLH VFSA+G +QKIA+F+KNG QALIQY D+ TA +AKEALEGHCIYD
Sbjct: 61 ENMQYAVTVDVLHTVFSAYGTLQKIAIFEKNGSTQALIQYSDJPTAQIAKEALEGHCIYD 120
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 29/44 (65%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSI 69
VFSA+G + KI FEK QAL+Q+SD TA AK AL+G I
Sbjct: 75 VFSAYGTLQKIAIFEKNGSTQALIQYSDJPTAQIAKEALEGHCI 118
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 211 ISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
+SYS HTDL+IK + RSRDYT P P+
Sbjct: 2 MSYSAHTDLNIKFQSHRSRDYTNPYLPV 29
>gi|313757914|gb|ADR78665.1| polypyrimidine tract-binding protein 1 [Lepidium sativum]
Length = 116
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 85/116 (73%), Positives = 99/116 (85%)
Query: 96 KFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVL 155
KFQSHRSRDYTNPYLPV +A+D S Q ++G DGKK+E +SNVLL IENMQYAVT+DVL
Sbjct: 1 KFQSHRSRDYTNPYLPVNHTAMDGSMQPALGADGKKVESQSNVLLGLIENMQYAVTVDVL 60
Query: 156 HMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 211
H VFSA+G VQKIA+F+KNG QALIQY D+ TA +AKEALEGHCIYDGG+CKL +
Sbjct: 61 HTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEALEGHCIYDGGYCKLRL 116
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 36/60 (60%), Gaps = 6/60 (10%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSA+G V KI FEK QAL+Q+SD TA+ AK AL+G I + G C LR+
Sbjct: 63 VFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEALEGHCI------YDGGYCKLRL 116
>gi|414881409|tpg|DAA58540.1| TPA: hypothetical protein ZEAMMB73_710436 [Zea mays]
gi|414881410|tpg|DAA58541.1| TPA: hypothetical protein ZEAMMB73_710436 [Zea mays]
Length = 314
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 87/161 (54%), Positives = 106/161 (65%), Gaps = 30/161 (18%)
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
MQY VT+DVLH VFSAFG VQKIA+F+KNG QALIQYPD+QTA AKEALEGH IY+GG
Sbjct: 1 MQYVVTIDVLHEVFSAFGFVQKIAIFEKNG-FQALIQYPDIQTAYAAKEALEGHSIYEGG 59
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQ 265
+CKLH+++SRHT+L++KVNN+R RDYT + + QPSILG QP+P VGA
Sbjct: 60 YCKLHLTFSRHTELNVKVNNERGRDYTKGNATPSSDQPSILGPQPIPSVGA--------- 110
Query: 266 FAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPG 306
A+PPA S+P + MPPG
Sbjct: 111 --------------------AIPPAQGSVPSAATNSVMPPG 131
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 54/83 (65%), Gaps = 7/83 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
VFSAFGFV KI FEK GFQAL+Q+ D +TA +AK AL+G SI G C L
Sbjct: 12 EVFSAFGFVQKIAIFEKN-GFQALIQYPDIQTAYAAKEALEGHSI------YEGGYCKLH 64
Query: 85 ITYSAHTDLSVKFQSHRSRDYTN 107
+T+S HT+L+VK + R RDYT
Sbjct: 65 LTFSRHTELNVKVNNERGRDYTK 87
>gi|307103430|gb|EFN51690.1| hypothetical protein CHLNCDRAFT_139935 [Chlorella variabilis]
Length = 353
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 114/184 (61%), Gaps = 9/184 (4%)
Query: 26 VFSAFGFVHKITTFEK-TAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
VF A GFV K+ T+ K G A VQF D +TA++ +N L G+ IPR+LL ++ P L
Sbjct: 170 VFGAHGFVKKLVTYAKPEGGVVAWVQFPDAQTAATVRNTLQGQPIPRHLLNDHPNPPVLD 229
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAP---SAIDASGQLSVGLDGKKLEPESNVLLA 141
+ ++A DL+++ QS+ +RDYTN +P S I A S G DG SNVL
Sbjct: 230 MAFAAQPDLAIRAQSYCTRDYTNAAIPWGEPDLSMIQAMLPSSGGTDGP-----SNVLSV 284
Query: 142 SIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCI 201
S + M Y VT+D +H +FS +G VQKI +F+++G AL+QY DV TA A+ ALEGH +
Sbjct: 285 SFDQMTYPVTVDGVHTIFSTYGFVQKIHIFERDGRTVALVQYADVATADSARAALEGHAM 344
Query: 202 YDGG 205
YDGG
Sbjct: 345 YDGG 348
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 12/131 (9%)
Query: 138 VLLASIENMQ----YAVTLDVLHMVFSAFGPVQKIAMFDK-NGGLQALIQYPDVQTAVVA 192
VL ++ N+Q AVTLD+L+ VF A G V+K+ + K GG+ A +Q+PD QTA
Sbjct: 146 VLQVNVINIQPDLAQAVTLDLLNSVFGAHGFVKKLVTYAKPEGGVVAWVQFPDAQTAATV 205
Query: 193 KEALEG-----HCIYDG-GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSIL 246
+ L+G H + D L ++++ DL+I+ + +RDYT + P S++
Sbjct: 206 RNTLQGQPIPRHLLNDHPNPPVLDMAFAAQPDLAIRAQSYCTRDYTNAAIPWGEPDLSMI 265
Query: 247 GQQPVPMVGAT 257
Q +P G T
Sbjct: 266 -QAMLPSSGGT 275
>gi|413955319|gb|AFW87968.1| hypothetical protein ZEAMMB73_683995, partial [Zea mays]
Length = 81
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/81 (70%), Positives = 69/81 (85%)
Query: 104 DYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFG 163
DY NPYLP+ SA+D + Q +VG DG+++E + NVLLASIENMQYAVT+DVLH VFS+FG
Sbjct: 1 DYNNPYLPINYSAMDGTLQPAVGADGRQVEAQGNVLLASIENMQYAVTVDVLHTVFSSFG 60
Query: 164 PVQKIAMFDKNGGLQALIQYP 184
VQKIA+F+KNGG QALIQYP
Sbjct: 61 SVQKIAIFEKNGGTQALIQYP 81
>gi|66472746|ref|NP_001018313.1| polypyrimidine tract binding protein 1a [Danio rerio]
gi|63100731|gb|AAH95372.1| Polypyrimidine tract binding protein 1a [Danio rerio]
Length = 574
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 83/136 (61%), Gaps = 1/136 (0%)
Query: 113 APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD 172
A +A+ G +DG + +S VL +EN+ Y VTLDVLH +FS FG V KI F
Sbjct: 168 AVNAVQTGGMSLAAIDGAGMGSQSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKIITFT 227
Query: 173 KNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 232
KN QAL+QY D TA AK +L+G IY+ C L IS+S+ T L++K NND+SRDYT
Sbjct: 228 KNNQFQALVQYSDGMTAQHAKLSLDGQNIYN-ACCTLRISFSKLTSLNVKYNNDKSRDYT 286
Query: 233 LPSTPMVNSQPSILGQ 248
P P +SQPS Q
Sbjct: 287 RPDLPTGDSQPSFDAQ 302
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQALVQ+SD TA AK +LDG++I CTLR
Sbjct: 212 QIFSKFGTVLKIITFTKNNQFQALVQYSDGMTAQHAKLSLDGQNIYN-------ACCTLR 264
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I++S T L+VK+ + +SRDYT P LP S
Sbjct: 265 ISFSKLTSLNVKYNNDKSRDYTRPDLPTGDS 295
>gi|348510807|ref|XP_003442936.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Oreochromis
niloticus]
Length = 575
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/139 (49%), Positives = 84/139 (60%), Gaps = 5/139 (3%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL +EN+ Y VTLDVLH +FS FG V KI F KN QALIQY D TA AK
Sbjct: 194 QSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALIQYADAMTAQHAKM 253
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 254
+L+G IY+ C L IS+S+ T L++K NND+SRDYT P P +SQPSI Q
Sbjct: 254 SLDGQNIYN-ACCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTADSQPSIDHQAMAAAF 312
Query: 255 GA----TANQYNGAQFAPP 269
A +A+ Y GA PP
Sbjct: 313 AAPGIISASPYGGAHAFPP 331
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 57/90 (63%), Gaps = 7/90 (7%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+FS FG V KI TF K FQAL+Q++D TA AK +LDG++I CTLRI
Sbjct: 217 IFSKFGTVLKIITFTKNNQFQALIQYADAMTAQHAKMSLDGQNIYN-------ACCTLRI 269
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
++S T L+VK+ + +SRDYT P LP A S
Sbjct: 270 SFSKLTSLNVKYNNDKSRDYTRPDLPTADS 299
>gi|413955317|gb|AFW87966.1| hypothetical protein ZEAMMB73_428640 [Zea mays]
Length = 229
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 52/74 (70%), Positives = 64/74 (86%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFG+VHKI TFEK AGFQAL+Q++D TAS+AK +LDGRSIP YLLPE++ C LRI
Sbjct: 134 VFSAFGYVHKIATFEKAAGFQALIQYTDAATASAAKESLDGRSIPSYLLPEHVTSCCLRI 193
Query: 86 TYSAHTDLSVKFQS 99
++SAH DL++KFQS
Sbjct: 194 SFSAHKDLNIKFQS 207
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 62/97 (63%), Gaps = 7/97 (7%)
Query: 133 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
E NVLL +IE +Q + VT+DV+HMVFSAFG V KIA F+K G QALIQY D TA
Sbjct: 108 ETAGNVLLVTIEGVQSSDVTIDVIHMVFSAFGYVHKIATFEKAAGFQALIQYTDAATASA 167
Query: 192 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIK 222
AKE+L+G I C L IS+S H DL+IK
Sbjct: 168 AKESLDGRSIPSYLLPEHVTSCCLRISFSAHKDLNIK 204
>gi|432936644|ref|XP_004082208.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Oryzias
latipes]
Length = 577
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 85/142 (59%), Gaps = 11/142 (7%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL +EN+ Y VTLDVLH +FS FG V KI F KN QALIQY D TA AK
Sbjct: 194 QSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALIQYADAMTAQHAKL 253
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 254
+L+G IY+ C L IS+S+ T L++K NND+SRDYT P P +SQPS+ Q M
Sbjct: 254 SLDGQNIYN-ACCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTADSQPSLDHQ---AMA 309
Query: 255 GA-------TANQYNGAQFAPP 269
A +A+ Y GA PP
Sbjct: 310 AAAFGPGIISASPYGGAHAFPP 331
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 57/90 (63%), Gaps = 7/90 (7%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+FS FG V KI TF K FQAL+Q++D TA AK +LDG++I CTLRI
Sbjct: 217 IFSKFGTVLKIITFTKNNQFQALIQYADAMTAQHAKLSLDGQNIYN-------ACCTLRI 269
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
++S T L+VK+ + +SRDYT P LP A S
Sbjct: 270 SFSKLTSLNVKYNNDKSRDYTRPDLPTADS 299
>gi|413955316|gb|AFW87965.1| hypothetical protein ZEAMMB73_428640 [Zea mays]
Length = 269
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/74 (70%), Positives = 64/74 (86%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFSAFG+VHKI TFEK AGFQAL+Q++D TAS+AK +LDGRSIP YLLPE++ C LRI
Sbjct: 174 VFSAFGYVHKIATFEKAAGFQALIQYTDAATASAAKESLDGRSIPSYLLPEHVTSCCLRI 233
Query: 86 TYSAHTDLSVKFQS 99
++SAH DL++KFQS
Sbjct: 234 SFSAHKDLNIKFQS 247
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 63/100 (63%), Gaps = 7/100 (7%)
Query: 133 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
E NVLL +IE +Q + VT+DV+HMVFSAFG V KIA F+K G QALIQY D TA
Sbjct: 148 ETAGNVLLVTIEGVQSSDVTIDVIHMVFSAFGYVHKIATFEKAAGFQALIQYTDAATASA 207
Query: 192 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNN 225
AKE+L+G I C L IS+S H DL+IK +
Sbjct: 208 AKESLDGRSIPSYLLPEHVTSCCLRISFSAHKDLNIKFQS 247
>gi|47198889|emb|CAF88128.1| unnamed protein product [Tetraodon nigroviridis]
Length = 217
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL +EN+ Y VTLDVLH +FS FG V KI F KN QALIQY D TA AK
Sbjct: 19 QSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALIQYADSMTAQHAKL 78
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
+L+G IY+ C L IS+S+ T L++K NND+SRDYT P P ++QPSI
Sbjct: 79 SLDGQNIYN-ACCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTADAQPSI 128
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 7/89 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D+ TA AK +LDG++I CTLR
Sbjct: 41 QIFSKFGTVLKIITFTKNNQFQALIQYADSMTAQHAKLSLDGQNIYNAC-------CTLR 93
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 113
I++S T L+VK+ + +SRDYT P LP A
Sbjct: 94 ISFSKLTSLNVKYNNDKSRDYTRPDLPTA 122
>gi|359497338|ref|XP_003635487.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein homolog 2-like, partial [Vitis vinifera]
Length = 273
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/69 (81%), Positives = 61/69 (88%), Gaps = 1/69 (1%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSA-KNALDGRSIPRYLLPENMGPCTLR 84
VFSAFGFVHKIT FEKT FQALVQFSD+ETAS+A KNA DGRSIPRYLLPE++ PCTLR
Sbjct: 133 VFSAFGFVHKITIFEKTVRFQALVQFSDSETASTAKKNAFDGRSIPRYLLPEHLRPCTLR 192
Query: 85 ITYSAHTDL 93
IT+SAH L
Sbjct: 193 ITFSAHIYL 201
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 53/91 (58%), Gaps = 8/91 (8%)
Query: 137 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE- 194
NVLL +IE + V ++VLH+VFSAFG V KI +F+K QAL+Q+ D +TA AK+
Sbjct: 111 NVLLVTIEGADAHLVNINVLHLVFSAFGFVHKITIFEKTVRFQALVQFSDSETASTAKKN 170
Query: 195 ALEGHCIYDGGF------CKLHISYSRHTDL 219
A +G I C L I++S H L
Sbjct: 171 AFDGRSIPRYLLPEHLRPCTLRITFSAHIYL 201
>gi|169790993|ref|NP_001116126.1| polypyrimidine tract binding protein-like [Danio rerio]
Length = 564
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 96/162 (59%), Gaps = 10/162 (6%)
Query: 87 YSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDA--SGQLSVG-LDGKKLEPESNVLLASI 143
YS H +L ++ R A A++A +G L++G +D + S VL +
Sbjct: 142 YSNHKELKTDNSPNQVR------AQAALQAVNAVQTGSLTLGGVDPSGMTGPSPVLRVIV 195
Query: 144 ENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYD 203
EN+ Y VTLDVLH +FS FG V K+ F KN QAL+Q+ D TA AK AL+G IY+
Sbjct: 196 ENLFYPVTLDVLHQIFSKFGTVLKVITFTKNNQFQALLQFTDGLTAQHAKLALDGQNIYN 255
Query: 204 GGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
G C L IS+S+ T L++K NND+SRDYT P P +SQP++
Sbjct: 256 GC-CTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTGDSQPAL 296
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 57/90 (63%), Gaps = 7/90 (7%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+FS FG V K+ TF K FQAL+QF+D TA AK ALDG++I G CTLRI
Sbjct: 210 IFSKFGTVLKVITFTKNNQFQALLQFTDGLTAQHAKLALDGQNIYN-------GCCTLRI 262
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
++S T L+VK+ + +SRDYT P LP S
Sbjct: 263 SFSKLTSLNVKYNNDKSRDYTRPDLPTGDS 292
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 28/197 (14%)
Query: 26 VFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G V ++ F K AL+Q SD A A + L+G+ + Y P LR
Sbjct: 390 LFGVYGDVLRVKIMFNKKE--NALIQMSDGTQAQLAMSHLNGQKL--YGRP-------LR 438
Query: 85 ITYSAHTDLSVKFQSHR----SRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLL 140
IT S HT + + + H ++DY+N P+ S S + P S+ L
Sbjct: 439 ITLSKHTTVQMPREGHEDQGLTKDYSNS--PLHRFKKPGSKNYS------NIFPPSSTL- 489
Query: 141 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 200
+ N+ +V D L ++F + G + K F + ALIQ V+ A+ + H
Sbjct: 490 -HLSNIPPSVVEDDLKLLFGSSGALVKNFKFFQKDRKMALIQMSSVEEAIESLIQFHNHD 548
Query: 201 IYDGGFCKLHISYSRHT 217
+ G L +S+S+ T
Sbjct: 549 L--GENHHLRVSFSKST 563
>gi|61403202|gb|AAH91854.1| Ptbp1b protein [Danio rerio]
Length = 586
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 96/162 (59%), Gaps = 10/162 (6%)
Query: 87 YSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDA--SGQLSVG-LDGKKLEPESNVLLASI 143
YS H +L ++ R A A++A +G L++G +D + S VL +
Sbjct: 164 YSNHKELKTDNSPNQVRA------QAALQAVNAVQTGSLTLGGVDPSGMTGPSPVLRVIV 217
Query: 144 ENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYD 203
EN+ Y VTLDVLH +FS FG V K+ F KN QAL+Q+ D TA AK AL+G IY+
Sbjct: 218 ENLFYPVTLDVLHQIFSKFGTVLKVITFTKNNQFQALLQFTDGLTAQHAKLALDGQNIYN 277
Query: 204 GGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
G C L IS+S+ T L++K NND+SRDYT P P +SQP++
Sbjct: 278 -GCCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTGDSQPAL 318
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 57/90 (63%), Gaps = 7/90 (7%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+FS FG V K+ TF K FQAL+QF+D TA AK ALDG++I G CTLRI
Sbjct: 232 IFSKFGTVLKVITFTKNNQFQALLQFTDGLTAQHAKLALDGQNIYN-------GCCTLRI 284
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
++S T L+VK+ + +SRDYT P LP S
Sbjct: 285 SFSKLTSLNVKYNNDKSRDYTRPDLPTGDS 314
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 28/197 (14%)
Query: 26 VFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G V ++ F K AL+Q SD A A + L+G+ + Y P LR
Sbjct: 412 LFGVYGDVLRVKIMFNKKE--NALIQMSDGTQAQLAMSHLNGQKL--YGRP-------LR 460
Query: 85 ITYSAHTDLSVKFQSHR----SRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLL 140
IT S HT + + + H ++DY+N P+ S S + P S+ L
Sbjct: 461 ITLSKHTTVQMPREGHEDQGLTKDYSNS--PLHRFKKPGSKNYS------NIFPPSSTL- 511
Query: 141 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 200
+ N+ +V D L ++F + G + K F + ALIQ V+ A+ + H
Sbjct: 512 -HLSNIPPSVVEDDLKLLFGSSGALVKNFKFFQKDRKMALIQMSSVEEAIESLIQFHNHD 570
Query: 201 IYDGGFCKLHISYSRHT 217
+ G L +S+S+ T
Sbjct: 571 L--GENHHLRVSFSKST 585
>gi|340375863|ref|XP_003386453.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Amphimedon
queenslandica]
Length = 476
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 119/235 (50%), Gaps = 26/235 (11%)
Query: 7 PLSRKYLQWQ-LSASGERAHVF---SAFGFVHKITTFEKTAGFQALVQFSDTETASSAKN 62
P++ + L + L + A VF S +G V K+ + QA V+ ++ TA + +
Sbjct: 17 PVTSRVLHIRNLPSDATEADVFMLMSTYGAVSKVLLLRQKN--QAFVELAELSTACALVD 74
Query: 63 ALDGRSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQ 122
A R P + T+ I +S H +L + P+A +
Sbjct: 75 AFSTR-------PAQIKDRTVYIQFSKHQELK------------SGSTPIANPGGVPTFT 115
Query: 123 LSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQ 182
+VG+ G +++L IENM Y +T+DVLH +F+ +G V K+ F KN ALIQ
Sbjct: 116 STVGVVGTSQGQPNSILRVIIENMIYPITIDVLHQIFAKYGDVLKVVTFMKNTQFHALIQ 175
Query: 183 YPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
YP+ A AK AL+G IY+G C LHI YS+ ++L++K NN+++RD+T P P
Sbjct: 176 YPNEIIATNAKTALDGQNIYNGC-CTLHIDYSKLSNLTVKFNNEKTRDFTRPDLP 229
>gi|410897871|ref|XP_003962422.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 1
[Takifugu rubripes]
Length = 575
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 84/139 (60%), Gaps = 5/139 (3%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL +EN+ Y VTL+VLH +FS FG V KI F KN QALIQ+ D TA AK
Sbjct: 193 QSPVLRVIVENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALIQHVDSMTAQHAKL 252
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 254
+L+G IY+ C L IS+S+ T L++K NND+SRDYT P P +SQPS+ Q
Sbjct: 253 SLDGQNIYN-ACCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTADSQPSLDPQTMAAAF 311
Query: 255 GA----TANQYNGAQFAPP 269
A +A+ Y GA PP
Sbjct: 312 AAPGIISASPYGGAHAFPP 330
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 56/90 (62%), Gaps = 7/90 (7%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+FS FG V KI TF K FQAL+Q D+ TA AK +LDG++I CTLRI
Sbjct: 216 IFSKFGTVLKIITFTKNNQFQALIQHVDSMTAQHAKLSLDGQNIYN-------ACCTLRI 268
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
++S T L+VK+ + +SRDYT P LP A S
Sbjct: 269 SFSKLTSLNVKYNNDKSRDYTRPDLPTADS 298
>gi|410897873|ref|XP_003962423.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 2
[Takifugu rubripes]
Length = 577
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 84/139 (60%), Gaps = 5/139 (3%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL +EN+ Y VTL+VLH +FS FG V KI F KN QALIQ+ D TA AK
Sbjct: 195 QSPVLRVIVENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALIQHVDSMTAQHAKL 254
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 254
+L+G IY+ C L IS+S+ T L++K NND+SRDYT P P +SQPS+ Q
Sbjct: 255 SLDGQNIYN-ACCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTADSQPSLDPQTMAAAF 313
Query: 255 GA----TANQYNGAQFAPP 269
A +A+ Y GA PP
Sbjct: 314 AAPGIISASPYGGAHAFPP 332
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 56/90 (62%), Gaps = 7/90 (7%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+FS FG V KI TF K FQAL+Q D+ TA AK +LDG++I CTLRI
Sbjct: 218 IFSKFGTVLKIITFTKNNQFQALIQHVDSMTAQHAKLSLDGQNIYN-------ACCTLRI 270
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
++S T L+VK+ + +SRDYT P LP A S
Sbjct: 271 SFSKLTSLNVKYNNDKSRDYTRPDLPTADS 300
>gi|426386370|ref|XP_004059658.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 3
[Gorilla gorilla gorilla]
Length = 552
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 84/140 (60%), Gaps = 5/140 (3%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL--- 289
Query: 249 QPVPMVGATANQYNGAQFAP 268
M A A+ Y GA F P
Sbjct: 290 -DQTMAAAFASPYAGAGFPP 308
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNAC-------CTLR 254
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|395831594|ref|XP_003788880.1| PREDICTED: polypyrimidine tract-binding protein 1 [Otolemur
garnettii]
Length = 582
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 84/140 (60%), Gaps = 5/140 (3%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 206 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 265
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 266 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL--- 321
Query: 249 QPVPMVGATANQYNGAQFAP 268
M A A+ Y GA F P
Sbjct: 322 -DQTMAAAFASPYAGAGFPP 340
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 110/251 (43%), Gaps = 71/251 (28%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 234 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 286
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS-------------------------AIDA 119
I +S T L+VK+ + +SRDYT P LP S AI
Sbjct: 287 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFASPYAGAGFPPTFAIPQ 346
Query: 120 SGQLSV----------------------------GLDGKKLEPESNVLLASIENMQYAVT 151
+ LSV GL G ++VLL S N + VT
Sbjct: 347 AAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAGAG----NSVLLVSNLNPER-VT 401
Query: 152 LDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 210
L ++F +G VQ++ +F+K AL+Q D A +A L GH ++ +
Sbjct: 402 PQSLFILFGVYGDVQRVKILFNKKE--NALVQMADANQAQLAMSHLSGHKLHGK---PIR 456
Query: 211 ISYSRHTDLSI 221
I+ S+H ++ +
Sbjct: 457 ITLSKHQNVQL 467
>gi|426229473|ref|XP_004008815.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 3 [Ovis
aries]
Length = 550
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 84/140 (60%), Gaps = 5/140 (3%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL--- 289
Query: 249 QPVPMVGATANQYNGAQFAP 268
M A A+ Y GA F P
Sbjct: 290 -DQTMAAAFASPYAGAGFPP 308
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 109/251 (43%), Gaps = 71/251 (28%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS-------------------------AIDA 119
I +S T L+VK+ + +SRDYT P LP S AI
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFASPYAGAGFPPTFAIPQ 314
Query: 120 SGQLSV----------------------------GLDGKKLEPESNVLLASIENMQYAVT 151
+ LSV GL G ++VLL S N + VT
Sbjct: 315 AAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAGAG----NSVLLVSNLNPER-VT 369
Query: 152 LDVLHMVFSAFGPVQKI-AMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 210
L ++F +G VQ++ +F+K AL+Q D A +A L GH ++ +
Sbjct: 370 PQSLFILFGVYGDVQRVKVLFNKKE--NALVQMADGSQAQLAMSHLNGHKLHGK---PVR 424
Query: 211 ISYSRHTDLSI 221
I+ S+H + +
Sbjct: 425 ITLSKHQSVQL 435
>gi|397524|emb|CAA52653.1| polypyrimidine tract binding protein [Rattus norvegicus]
Length = 556
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 94/166 (56%), Gaps = 15/166 (9%)
Query: 107 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
N L + +A+DA G + +S VL +EN+ Y VTLDVLH +FS FG V
Sbjct: 160 NLALRASAAAVDA---------GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVL 210
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
KI F KN QAL+QY D +A AK +L+G IY+ C L I +S+ T L++K NND
Sbjct: 211 KIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNND 269
Query: 227 RSRDYTLPSTPMVNSQPSILGQQPVPMVGA----TANQYNGAQFAP 268
+SRDYT P P +SQPS L Q GA +A+ Y GA F P
Sbjct: 270 KSRDYTRPDLPSGDSQPS-LDQTMAAAFGAPGIMSASPYAGAGFPP 314
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|403308155|ref|XP_003944537.1| PREDICTED: uncharacterized protein LOC101029560 [Saimiri
boliviensis boliviensis]
Length = 1167
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 84/138 (60%), Gaps = 6/138 (4%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +A AK
Sbjct: 415 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 474
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 254
+L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 475 SLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQTMAAAF 532
Query: 255 GA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 533 GAPGIISASPYAGAGFPP 550
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 437 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNAC-------CTLR 489
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 490 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 520
>gi|14165464|ref|NP_114367.1| polypyrimidine tract-binding protein 1 isoform b [Homo sapiens]
gi|332850820|ref|XP_003316018.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 3 [Pan
troglodytes]
gi|35770|emb|CAA46443.1| polypirimidine tract binding protein [Homo sapiens]
gi|119581556|gb|EAW61152.1| polypyrimidine tract binding protein 1, isoform CRA_a [Homo
sapiens]
gi|410218532|gb|JAA06485.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
Length = 550
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 84/140 (60%), Gaps = 5/140 (3%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL--- 289
Query: 249 QPVPMVGATANQYNGAQFAP 268
M A A+ Y GA F P
Sbjct: 290 -DQTMAAAFASPYAGAGFPP 308
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 110/251 (43%), Gaps = 71/251 (28%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS-------------------------AIDA 119
I +S T L+VK+ + +SRDYT P LP S AI
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFASPYAGAGFPPTFAIPQ 314
Query: 120 SGQLSV----------------------------GLDGKKLEPESNVLLASIENMQYAVT 151
+ LSV GL G ++VLL S N + VT
Sbjct: 315 AAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAGAG----NSVLLVSNLNPER-VT 369
Query: 152 LDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 210
L ++F +G VQ++ +F+K AL+Q D A +A L GH ++ +
Sbjct: 370 PQSLFILFGVYGDVQRVKILFNKKE--NALVQMADGNQAQLAMSHLNGHKLHGK---PIR 424
Query: 211 ISYSRHTDLSI 221
I+ S+H ++ +
Sbjct: 425 ITLSKHQNVQL 435
>gi|73987397|ref|XP_868637.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 6 [Canis
lupus familiaris]
Length = 550
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 84/140 (60%), Gaps = 5/140 (3%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL--- 289
Query: 249 QPVPMVGATANQYNGAQFAP 268
M A A+ Y GA F P
Sbjct: 290 -DQTMAAAFASPYAGAGFPP 308
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 110/251 (43%), Gaps = 71/251 (28%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS-------------------------AIDA 119
I +S T L+VK+ + +SRDYT P LP S AI
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFASPYAGAGFPPTFAIPQ 314
Query: 120 SGQLSV----------------------------GLDGKKLEPESNVLLASIENMQYAVT 151
+ LSV GL G ++VLL S N + VT
Sbjct: 315 AAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAG----AGNSVLLVSNLNPER-VT 369
Query: 152 LDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 210
L ++F +G VQ++ +F+K AL+Q D A +A L GH ++ +
Sbjct: 370 PQSLFILFGVYGDVQRVKILFNKKE--NALVQMADGSQAQLAMSHLNGHKLHGK---PVR 424
Query: 211 ISYSRHTDLSI 221
I+ S+H ++ +
Sbjct: 425 ITLSKHQNVQL 435
>gi|402903490|ref|XP_003914598.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 3 [Papio
anubis]
Length = 549
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 84/140 (60%), Gaps = 5/140 (3%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL--- 288
Query: 249 QPVPMVGATANQYNGAQFAP 268
M A A+ Y GA F P
Sbjct: 289 -DQTMAAAFASPYAGAGFPP 307
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 110/251 (43%), Gaps = 71/251 (28%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS-------------------------AIDA 119
I +S T L+VK+ + +SRDYT P LP S AI
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFASPYAGAGFPPTFAIPQ 313
Query: 120 SGQLSV----------------------------GLDGKKLEPESNVLLASIENMQYAVT 151
+ LSV GL G ++VLL S N + VT
Sbjct: 314 AAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAG----AGNSVLLVSNLNPER-VT 368
Query: 152 LDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 210
L ++F +G VQ++ +F+K AL+Q D A +A L GH ++ +
Sbjct: 369 PQSLFILFGVYGDVQRVKILFNKKE--NALVQMADGNQAQLAMSHLNGHKLHGK---PIR 423
Query: 211 ISYSRHTDLSI 221
I+ S+H ++ +
Sbjct: 424 ITLSKHQNVQL 434
>gi|119581561|gb|EAW61157.1| polypyrimidine tract binding protein 1, isoform CRA_f [Homo
sapiens]
Length = 520
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 84/140 (60%), Gaps = 5/140 (3%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 144 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 203
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 204 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL--- 259
Query: 249 QPVPMVGATANQYNGAQFAP 268
M A A+ Y GA F P
Sbjct: 260 -DQTMAAAFASPYAGAGFPP 278
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 110/251 (43%), Gaps = 71/251 (28%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 172 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 224
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS-------------------------AIDA 119
I +S T L+VK+ + +SRDYT P LP S AI
Sbjct: 225 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFASPYAGAGFPPTFAIPQ 284
Query: 120 SGQLSV----------------------------GLDGKKLEPESNVLLASIENMQYAVT 151
+ LSV GL G ++VLL S N + VT
Sbjct: 285 AAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAG----AGNSVLLVSNLNPER-VT 339
Query: 152 LDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 210
L ++F +G VQ++ +F+K AL+Q D A +A L GH ++ +
Sbjct: 340 PQSLFILFGVYGDVQRVKILFNKKE--NALVQMADGNQAQLAMSHLNGHKLHGK---PIR 394
Query: 211 ISYSRHTDLSI 221
I+ S+H ++ +
Sbjct: 395 ITLSKHQNVQL 405
>gi|148699703|gb|EDL31650.1| mCG13402, isoform CRA_g [Mus musculus]
Length = 366
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIMSASPYAGAGFPP 314
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|158454983|gb|AAI03384.1| PTBP1 protein [Bos taurus]
Length = 446
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIMSASPYAGAGFPP 315
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNAC-------CTLR 254
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|355714176|gb|AES04919.1| polypyrimidine tract binding protein 1 [Mustela putorius furo]
Length = 353
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIMSASPYAGAGFPP 315
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNAC-------CTLR 254
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|354480918|ref|XP_003502650.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Cricetulus
griseus]
Length = 591
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 209 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 268
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 269 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 326
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 327 TMAAAFGAPGIMSASPYAGAGFPP 350
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 237 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 289
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 290 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 320
>gi|213513374|ref|NP_001133504.1| polypyrimidine tract-binding protein 2 [Salmo salar]
gi|209154262|gb|ACI33363.1| Polypyrimidine tract-binding protein 2 [Salmo salar]
Length = 520
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 93/180 (51%), Gaps = 6/180 (3%)
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIE 144
I YS H +L + R++ A SA+ G + G D S VL I+
Sbjct: 127 IQYSNHKELKTDAGNQRAQAVLQ-----AVSAVQGGGTPTSGSDLALTAASSPVLRIIID 181
Query: 145 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 204
NM Y VTLDVL +FS FG V KI F KN QAL+Q+ D TA AK AL+G IY+
Sbjct: 182 NMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFNDPSTAQQAKIALDGQNIYN- 240
Query: 205 GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGA 264
C L I YS+ +L++K NND+SRDYT P P + QP++ G +N GA
Sbjct: 241 SCCTLRIDYSKLVNLNVKYNNDKSRDYTRPELPAGDGQPAMDPNMAAAFQGKDSNSLLGA 300
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 109/249 (43%), Gaps = 53/249 (21%)
Query: 1 MFYICRPLSRKYLQWQLSASGERAHVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSA 60
MFY P++ LQ +FS FG V KI TF K FQAL+QF+D TA A
Sbjct: 183 MFY---PVTLDVLQ----------QIFSKFGTVMKIITFTKNNQFQALLQFNDPSTAQQA 229
Query: 61 KNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDAS 120
K ALDG++I CTLRI YS +L+VK+ + +SRDYT P LP
Sbjct: 230 KIALDGQNIYN-------SCCTLRIDYSKLVNLNVKYNNDKSRDYTRPELPAGDGQPAMD 282
Query: 121 GQLSVGLDGKK-------LEP---------------------ESNVLLASIENMQYAVTL 152
++ GK L P S VLLAS N + VT
Sbjct: 283 PNMAAAFQGKDSNSLLGALSPLNAAAAAAAAAGRVALSGHSGSSGVLLASNLN-EEMVTP 341
Query: 153 DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 212
L +F +G Q++ + N ALIQ D A +A L G +Y + ++
Sbjct: 342 QSLFTLFGVYGDTQRVKIL-YNKKDSALIQMADASQAQLAMSHLNGQKMYGK---VIRVA 397
Query: 213 YSRHTDLSI 221
S+HT + +
Sbjct: 398 LSKHTSVQL 406
>gi|351714013|gb|EHB16932.1| Polypyrimidine tract-binding protein 1, partial [Heterocephalus
glaber]
Length = 548
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 163 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNSQFQALLQYADPVS 222
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 223 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 280
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 281 TMAAAFGAPGIISASPYAGAGFPP 304
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K + FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 191 QIFSKFGTVLKIITFTKNSQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 243
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 244 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 274
>gi|426386366|ref|XP_004059656.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1
[Gorilla gorilla gorilla]
Length = 559
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIISASPYAGAGFPP 315
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNAC-------CTLR 254
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|444509522|gb|ELV09317.1| Polypyrimidine tract-binding protein 1, partial [Tupaia chinensis]
Length = 522
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 84/138 (60%), Gaps = 6/138 (4%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +A AK
Sbjct: 155 QSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 214
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 254
+L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 215 SLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQTMAAAF 272
Query: 255 GA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 273 GAPGIISASPYAGAGFPP 290
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 177 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 229
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 230 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 260
>gi|28849152|dbj|BAC65159.1| polypirimidine tract binding protein [Mus musculus]
Length = 554
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIMSASPYAGAGFPP 314
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|426229469|ref|XP_004008813.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Ovis
aries]
Length = 557
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIMSASPYAGAGFPP 315
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|74194434|dbj|BAE37269.1| unnamed protein product [Mus musculus]
Length = 520
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIMSASPYAGAGFPP 314
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|42490826|gb|AAH66210.1| Polypyrimidine tract binding protein 1 [Mus musculus]
Length = 555
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIMSASPYAGAGFPP 314
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|402743987|ref|NP_001257986.1| polypyrimidine tract-binding protein 1 isoform a [Rattus
norvegicus]
gi|38197632|gb|AAH61858.1| Ptbp1 protein [Rattus norvegicus]
gi|149034647|gb|EDL89384.1| polypyrimidine tract binding protein 1, isoform CRA_a [Rattus
norvegicus]
Length = 556
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIMSASPYAGAGFPP 314
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|440893263|gb|ELR46101.1| Polypyrimidine tract-binding protein 1, partial [Bos grunniens
mutus]
Length = 548
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 165 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 224
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 225 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 282
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 283 TMAAAFGAPGIMSASPYAGAGFPP 306
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 193 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 245
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 246 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 276
>gi|344243367|gb|EGV99470.1| Polypyrimidine tract-binding protein 1 [Cricetulus griseus]
Length = 528
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 146 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 205
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 206 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 263
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 264 TMAAAFGAPGIMSASPYAGAGFPP 287
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 174 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 226
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 227 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 257
>gi|301776290|ref|XP_002923578.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 526
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIMSASPYAGAGFPP 315
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|281341342|gb|EFB16926.1| hypothetical protein PANDA_012716 [Ailuropoda melanoleuca]
Length = 540
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 162 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 221
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 222 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 279
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 280 TMAAAFGAPGIMSASPYAGAGFPP 303
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 190 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 242
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 243 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 273
>gi|73987389|ref|XP_542215.2| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Canis
lupus familiaris]
Length = 557
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIMSASPYAGAGFPP 315
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|410949959|ref|XP_003981684.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1 [Felis catus]
Length = 508
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIMSASPYAGAGFPP 315
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|355702910|gb|EHH29401.1| hypothetical protein EGK_09820, partial [Macaca mulatta]
Length = 555
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 172 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 231
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 232 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 289
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 290 TMAAAFGAPGIISASPYAGAGFPP 313
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 200 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 252
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 253 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 283
>gi|20809354|gb|AAH28848.1| Polypyrimidine tract binding protein 1 [Mus musculus]
Length = 555
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIMSASPYAGAGFPP 314
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|291227384|ref|XP_002733659.1| PREDICTED: polypyrimidine tract-binding protein 1-like
[Saccoglossus kowalevskii]
Length = 558
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 90/176 (51%), Gaps = 14/176 (7%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G L ++ VL +ENM Y VT+D+LH +FS FG V KI F+KN QALIQ+ D +
Sbjct: 179 GDTLGGQNTVLRVIVENMLYPVTVDILHQIFSKFGAVLKIITFNKNNTFQALIQFADAVS 238
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A +K +L+G IY+ C L I YS+ T L++K NND+SRDYT P P + QP +
Sbjct: 239 AQASKLSLDGQNIYN-ACCTLRIDYSKLTTLNVKYNNDKSRDYTRPDLPSGDGQPPL--- 294
Query: 249 QPVPMVGATANQYNGAQFAPPPPE----QPMMHQPTAAGWGAVPPASQSMPMMGNH 300
P G N A P P P AG+GA P M M H
Sbjct: 295 DPAMAFG------NAAPGMLPTPNAAAMGAAFANPALAGYGATVPGLPGMYSMPTH 344
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 55/87 (63%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+QF+D +A ++K +LDG++I CTLR
Sbjct: 207 QIFSKFGAVLKIITFNKNNTFQALIQFADAVSAQASKLSLDGQNIYN-------ACCTLR 259
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I YS T L+VK+ + +SRDYT P LP
Sbjct: 260 IDYSKLTTLNVKYNNDKSRDYTRPDLP 286
>gi|74152131|dbj|BAE32096.1| unnamed protein product [Mus musculus]
Length = 555
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIMSASPYAGAGFPP 314
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|116517301|ref|NP_001070831.1| polypyrimidine tract-binding protein 1 isoform 1 [Mus musculus]
gi|13938631|gb|AAH07472.1| Polypyrimidine tract binding protein 1 [Mus musculus]
gi|26328983|dbj|BAC28230.1| unnamed protein product [Mus musculus]
gi|26334239|dbj|BAC30837.1| unnamed protein product [Mus musculus]
gi|26335929|dbj|BAC31665.1| unnamed protein product [Mus musculus]
gi|26341260|dbj|BAC34292.1| unnamed protein product [Mus musculus]
gi|26353506|dbj|BAC40383.1| unnamed protein product [Mus musculus]
gi|74191391|dbj|BAE30277.1| unnamed protein product [Mus musculus]
gi|148699699|gb|EDL31646.1| mCG13402, isoform CRA_c [Mus musculus]
Length = 555
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIMSASPYAGAGFPP 314
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|402903486|ref|XP_003914596.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Papio
anubis]
gi|380814964|gb|AFE79356.1| polypyrimidine tract-binding protein 1 isoform a [Macaca mulatta]
gi|384948416|gb|AFI37813.1| polypyrimidine tract-binding protein 1 isoform a [Macaca mulatta]
Length = 556
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIISASPYAGAGFPP 314
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|312378791|gb|EFR25262.1| hypothetical protein AND_09562 [Anopheles darlingi]
Length = 399
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VL +E++ Y V+LDVLH +F FG V KI F KN QALIQYPD QTA AK++
Sbjct: 162 NTVLRVIVESLLYPVSLDVLHQIFQRFGKVLKIVTFTKNNSFQALIQYPDAQTAQTAKQS 221
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
L+G IY+ G C L I S+ T L++K NND+SRDYT PS P
Sbjct: 222 LDGQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDYTNPSLP 262
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 55/87 (63%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F FG V KI TF K FQAL+Q+ D +TA +AK +LDG++I G CTLR
Sbjct: 183 QIFQRFGKVLKIVTFTKNNSFQALIQYPDAQTAQTAKQSLDGQNIYN-------GCCTLR 235
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I S T L+VK+ + +SRDYTNP LP
Sbjct: 236 IDNSKLTALNVKYNNDKSRDYTNPSLP 262
>gi|119581557|gb|EAW61153.1| polypyrimidine tract binding protein 1, isoform CRA_b [Homo
sapiens]
Length = 527
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 144 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 203
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 204 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 261
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 262 TMAAAFGAPGIISASPYAGAGFPP 285
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 172 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 224
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 225 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 255
>gi|55824722|gb|AAH86489.1| Polypyrimidine tract binding protein 1 [Mus musculus]
Length = 555
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIGFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIMSASPYAGAGFPP 314
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 254 IGFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|4506243|ref|NP_002810.1| polypyrimidine tract-binding protein 1 isoform a [Homo sapiens]
gi|332850812|ref|XP_001172084.2| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Pan
troglodytes]
gi|32354|emb|CAA47386.1| nuclear ribonucleoprotein [Homo sapiens]
gi|35772|emb|CAA46444.1| polypirimidine tract binding protein [Homo sapiens]
gi|12803183|gb|AAH02397.1| Polypyrimidine tract binding protein 1 [Homo sapiens]
gi|15489171|gb|AAH13694.1| Polypyrimidine tract binding protein 1 [Homo sapiens]
gi|30582477|gb|AAP35465.1| polypyrimidine tract binding protein 1 [Homo sapiens]
gi|61359435|gb|AAX41718.1| polypyrimidine tract binding protein 1 [synthetic construct]
gi|61359442|gb|AAX41719.1| polypyrimidine tract binding protein 1 [synthetic construct]
gi|119581558|gb|EAW61154.1| polypyrimidine tract binding protein 1, isoform CRA_c [Homo
sapiens]
gi|410218528|gb|JAA06483.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
gi|410301208|gb|JAA29204.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
Length = 557
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIISASPYAGAGFPP 315
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|348550210|ref|XP_003460925.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 1
[Cavia porcellus]
Length = 557
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GLAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNSQFQALLQYADPVS 233
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIISASPYAGAGFPP 315
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K + FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNSQFQALLQYADPVSAQHAKLSLDGQNIYNAC-------CTLR 254
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|30583817|gb|AAP36157.1| Homo sapiens polypyrimidine tract binding protein 1 [synthetic
construct]
gi|61369451|gb|AAX43339.1| polypyrimidine tract binding protein 1 [synthetic construct]
Length = 558
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIISASPYAGAGFPP 315
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|334326796|ref|XP_001375584.2| PREDICTED: polypyrimidine tract-binding protein 1-like [Monodelphis
domestica]
Length = 557
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 84/138 (60%), Gaps = 6/138 (4%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +A AK
Sbjct: 180 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYSDPVSAQHAKL 239
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 254
+L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 240 SLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQTMAAAF 297
Query: 255 GA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 298 GAPGIISASPYAGAGFPP 315
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+SD +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYSDPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|395513379|ref|XP_003760903.1| PREDICTED: polypyrimidine tract-binding protein 1 [Sarcophilus
harrisii]
Length = 557
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 84/138 (60%), Gaps = 6/138 (4%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +A AK
Sbjct: 180 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYSDPVSAQHAKL 239
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 254
+L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 240 SLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQTMAAAF 297
Query: 255 GA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 298 GAPGIISASPYAGAGFPP 315
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+SD +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYSDPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|345323919|ref|XP_001506947.2| PREDICTED: polypyrimidine tract-binding protein 1 [Ornithorhynchus
anatinus]
Length = 707
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 94/166 (56%), Gaps = 15/166 (9%)
Query: 107 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
N L + +A+DA G GL S VL +EN+ Y VTLDVLH +FS FG V
Sbjct: 311 NMALSASAAAVDA-GMAIAGL--------SPVLRIIVENLFYPVTLDVLHQIFSKFGTVL 361
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
KI F KN QAL+QY + +A AK +L+G IY+ C L I +S+ T L++K NND
Sbjct: 362 KIITFTKNNQFQALLQYAEPMSAQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNND 420
Query: 227 RSRDYTLPSTPMVNSQPSILGQQPVPMVGA----TANQYNGAQFAP 268
+SRDYT P P +SQPS L Q GA +A+ Y GA F P
Sbjct: 421 KSRDYTRPDLPSGDSQPS-LDQTMAAAFGAPGIISASPYAGAGFPP 465
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+++ +A AK +LDG++I CTLR
Sbjct: 352 QIFSKFGTVLKIITFTKNNQFQALLQYAEPMSAQHAKLSLDGQNIYNAC-------CTLR 404
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 405 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 435
>gi|449273011|gb|EMC82640.1| Polypyrimidine tract-binding protein 1, partial [Columba livia]
Length = 525
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 87/149 (58%), Gaps = 10/149 (6%)
Query: 97 FQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLH 156
Q+ S N L +P+A+DA G + +S VL +EN+ Y VTLDVLH
Sbjct: 120 LQAVNSVQSGNLALLASPAAVDA---------GMAMAGQSPVLRIIVENLFYPVTLDVLH 170
Query: 157 MVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 216
+FS FG V KI F KN QAL+QY D +A AK +L+G IY+ C L I +S+
Sbjct: 171 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-ACCTLRIEFSKL 229
Query: 217 TDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
T L++K NND+SRDYT P P ++QP++
Sbjct: 230 TSLNVKYNNDKSRDYTRPDLPSGDNQPAL 258
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 171 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 223
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRDYT P LP
Sbjct: 224 IEFSKLTSLNVKYNNDKSRDYTRPDLP 250
>gi|47523538|ref|NP_999396.1| polypyrimidine tract-binding protein 1 [Sus scrofa]
gi|2500586|sp|Q29099.1|PTBP1_PIG RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB;
AltName: Full=Heterogeneous nuclear ribonucleoprotein I;
Short=hnRNP I
gi|1122433|emb|CAA63597.1| polypyrimidine tract-binding protein [Sus scrofa]
Length = 557
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P ++QPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPS-LDQ 291
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIMSASPYAGAGFPP 315
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRDYT P LP
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLP 281
>gi|387017724|gb|AFJ50980.1| Polypyrimidine tract-binding protein 1-like [Crotalus adamanteus]
Length = 556
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P ++QPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPS-LDQ 291
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIISASPYAGAGFPP 315
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRDYT P LP
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLP 281
>gi|147906715|ref|NP_001083815.1| polypyrimidine tract binding protein 1 [Xenopus laevis]
gi|6002571|gb|AAF00041.1|AF091370_1 hnRNP I-related RNA transport protein VgRBP60 [Xenopus laevis]
Length = 552
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 85/144 (59%), Gaps = 7/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVL +FS FG V KI F KN QAL+QY D +
Sbjct: 177 GIAMSGQSPVLRIIVENLFYPVTLDVLQQIFSKFGTVLKIITFTKNNQFQALLQYGDPVS 236
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P + QPS+
Sbjct: 237 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDGQPSL--D 293
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
Q + GA +AN Y GA F P
Sbjct: 294 QTIAAFGAPGLISANPYAGAGFHP 317
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D +A AK +LDG++I CTLR
Sbjct: 205 QIFSKFGTVLKIITFTKNNQFQALLQYGDPVSAQHAKLSLDGQNIYN-------ACCTLR 257
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRDYT P LP
Sbjct: 258 IDFSKLTSLNVKYNNDKSRDYTRPDLP 284
>gi|148224882|ref|NP_001080169.1| polypyrimidine tract binding protein 1 [Xenopus laevis]
gi|28278766|gb|AAH45068.1| Ptbp1 protein [Xenopus laevis]
Length = 547
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 93/165 (56%), Gaps = 16/165 (9%)
Query: 108 PYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQK 167
P L + + +DAS + + G +S VL +EN+ Y VTLDVL +FS FG V K
Sbjct: 159 PVLSASAAVVDAS----IAMSG-----QSPVLRIIVENLFYPVTLDVLQQIFSKFGTVLK 209
Query: 168 IAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDR 227
I F KN QAL+QY D +A AK +L+G IY+ C L I +S+ T L++K NND+
Sbjct: 210 IITFTKNNQFQALLQYGDPMSAQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDK 268
Query: 228 SRDYTLPSTPMVNSQPSILGQQPVPMVGA----TANQYNGAQFAP 268
SRDYT P P + QP++ Q + GA + N Y GA F P
Sbjct: 269 SRDYTRPDLPSGDGQPTL--DQTIAAFGAPGLISTNPYAGAGFPP 311
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D +A AK +LDG++I CTLR
Sbjct: 199 QIFSKFGTVLKIITFTKNNQFQALLQYGDPMSAQHAKLSLDGQNIYN-------ACCTLR 251
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRDYT P LP
Sbjct: 252 IDFSKLTSLNVKYNNDKSRDYTRPDLP 278
>gi|348505292|ref|XP_003440195.1| PREDICTED: regulator of differentiation 1 [Oreochromis niloticus]
Length = 514
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 130/279 (46%), Gaps = 51/279 (18%)
Query: 30 FGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG-----RSIPRYLLPENMGPCTLR 84
FG V K+ T KT QA ++ + E A + N RS P Y
Sbjct: 65 FGRVSKLITL-KTKN-QAFLEMASEEAAVTMVNYYTSATPSIRSQPVY------------ 110
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDA----SGQLSVGLDGKKLEP-ESNVL 139
I YS H +L ++ + T+ A AI+A SG ++ G +G+ + P +S VL
Sbjct: 111 IQYSTHREL-------KTDNMTSQRAQAALQAINAGAVHSGNMTSGGEGRGIAPGQSPVL 163
Query: 140 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 199
+EN+ Y VTL+VL +FS FG V KI F +N QAL+Q+ D A AK L+G
Sbjct: 164 RIIVENLFYPVTLEVLQQIFSKFGSVLKIITFTRNNQFQALLQFSDTVHAQHAKATLDGQ 223
Query: 200 CIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT---LPSTPMVNSQPSILGQQPVPMVGA 256
IY+G C L I +S+ + L++K NND+SRD+T LPS + +P G
Sbjct: 224 NIYNGC-CTLRIDFSKLSALNVKYNNDKSRDFTRADLPSGEL----------EPTAAFGV 272
Query: 257 TANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMP 295
Y A F P HQ T AVP + S P
Sbjct: 273 ALPPYGAAAFP------PTFHQHTGLSMAAVPGSLVSHP 305
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 103/226 (45%), Gaps = 50/226 (22%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+FS FG V KI TF + FQAL+QFSDT A AK LDG++I G CTLRI
Sbjct: 182 IFSKFGSVLKIITFTRNNQFQALLQFSDTVHAQHAKATLDGQNIYN-------GCCTLRI 234
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGL--DGKKLEPES------- 136
+S + L+VK+ + +SRD+T LP ++ + V L G P +
Sbjct: 235 DFSKLSALNVKYNNDKSRDFTRADLP--SGELEPTAAFGVALPPYGAAAFPPTFHQHTGL 292
Query: 137 -------------------------NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-M 170
+VLL S N + +VT L ++F +G VQ++ +
Sbjct: 293 SMAAVPGSLVSHPRVSLQMAPPVVHSVLLVSNLNPE-SVTPHCLFILFGVYGDVQRVKIL 351
Query: 171 FDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 216
F+K AL+Q D A +A L G ++ + ++ S+H
Sbjct: 352 FNKKEN--ALVQMSDATQAQLAMSHLNGQRLHGN---VIRVTLSKH 392
>gi|417402720|gb|JAA48196.1| Putative polypyrimidine tract-binding protein [Desmodus rotundus]
Length = 557
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY + +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYAEPVS 233
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIMSASPYAGAGFPP 315
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+++ +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYAEPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|347970969|ref|XP_318405.4| AGAP003945-PA [Anopheles gambiae str. PEST]
gi|333469570|gb|EAA13599.5| AGAP003945-PA [Anopheles gambiae str. PEST]
Length = 601
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VL +E++ Y V+LDVLH +F FG V KI F KN QALIQYPD QTA A+ +
Sbjct: 213 NTVLRVIVESLLYPVSLDVLHQIFQRFGKVLKIVTFTKNNSFQALIQYPDAQTAQTARAS 272
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
L+G IY+ G C L I S+ T L++K NND+SRDYT PS P
Sbjct: 273 LDGQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDYTNPSLP 313
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 55/87 (63%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F FG V KI TF K FQAL+Q+ D +TA +A+ +LDG++I G CTLR
Sbjct: 234 QIFQRFGKVLKIVTFTKNNSFQALIQYPDAQTAQTARASLDGQNIYN-------GCCTLR 286
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I S T L+VK+ + +SRDYTNP LP
Sbjct: 287 IDNSKLTALNVKYNNDKSRDYTNPSLP 313
>gi|338720441|ref|XP_003364168.1| PREDICTED: regulator of differentiation 1 isoform 2 [Equus
caballus]
Length = 457
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 113/246 (45%), Gaps = 46/246 (18%)
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGL------DGKKLEPESNV 138
I YS H +L +++R + A A+ A S+ L +G L +S V
Sbjct: 33 IQYSNHRELKTDNLPNQAR------VQAALQAVSAVQSGSLALPGAPTNEGTVLPGQSPV 86
Query: 139 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 198
L IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D A AK AL+G
Sbjct: 87 LRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPLNAHYAKMALDG 146
Query: 199 HCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATA 258
IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 147 QNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL------------- 192
Query: 259 NQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMGPGMMQMH 318
E PM AA +GA P S P G + P P G G+
Sbjct: 193 -------------EPPM-----AAAFGA--PGIISSPYAGAAGFAPAIGFPQGTGLSVQT 232
Query: 319 MPGQSG 324
+PG G
Sbjct: 233 VPGALG 238
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 105 QIFSKFGTVLKIITFTKNNQFQALLQYADPLNAHYAKMALDGQNIYN-------ACCTLR 157
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRD+T LP
Sbjct: 158 IDFSKLTSLNVKYNNDKSRDFTRLDLP 184
>gi|338720439|ref|XP_001490810.2| PREDICTED: regulator of differentiation 1 isoform 1 [Equus
caballus]
Length = 523
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 113/246 (45%), Gaps = 46/246 (18%)
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGL------DGKKLEPESNV 138
I YS H +L +++R + A A+ A S+ L +G L +S V
Sbjct: 99 IQYSNHRELKTDNLPNQAR------VQAALQAVSAVQSGSLALPGAPTNEGTVLPGQSPV 152
Query: 139 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 198
L IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D A AK AL+G
Sbjct: 153 LRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPLNAHYAKMALDG 212
Query: 199 HCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATA 258
IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 213 QNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL------------- 258
Query: 259 NQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMGPGMMQMH 318
E PM AA +GA P S P G + P P G G+
Sbjct: 259 -------------EPPM-----AAAFGA--PGIISSPYAGAAGFAPAIGFPQGTGLSVQT 298
Query: 319 MPGQSG 324
+PG G
Sbjct: 299 VPGALG 304
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 171 QIFSKFGTVLKIITFTKNNQFQALLQYADPLNAHYAKMALDGQNIYN-------ACCTLR 223
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRD+T LP
Sbjct: 224 IDFSKLTSLNVKYNNDKSRDFTRLDLP 250
>gi|348522752|ref|XP_003448888.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Oreochromis
niloticus]
Length = 654
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 111/214 (51%), Gaps = 12/214 (5%)
Query: 90 HTDLSVKFQSHRSRDYTN-PYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQY 148
H + V+F +H+ N P A +A+ A S +D + P S VL +EN+ Y
Sbjct: 240 HHPVYVQFSNHKELKTDNSPNQERAQAALRALS--SSHVDTAAVAP-STVLRVVVENLIY 296
Query: 149 AVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCK 208
VTLD L +FS FG V +I +F KN QAL+QY D +A AK +L+G IY+G C
Sbjct: 297 PVTLDALCQIFSKFGTVLRIIIFTKNNQFQALLQYSDGASAQAAKLSLDGQNIYNGC-CT 355
Query: 209 LHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGA----TANQYNGA 264
L IS+S+ T L++K NN++SRD+T P P + QP++ A +A Y GA
Sbjct: 356 LRISFSKLTSLNVKYNNEKSRDFTRPDLPTGDGQPTMEHTAMATAFAAPGIISAAPYAGA 415
Query: 265 QFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMG 298
A PP QP A+P A S+ + G
Sbjct: 416 THAFPP---AFTLQPAGLAVPALPGALASLSLPG 446
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 56/86 (65%), Gaps = 7/86 (8%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+FS FG V +I F K FQAL+Q+SD +A +AK +LDG++I G CTLRI
Sbjct: 306 IFSKFGTVLRIIIFTKNNQFQALLQYSDGASAQAAKLSLDGQNIYN-------GCCTLRI 358
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLP 111
++S T L+VK+ + +SRD+T P LP
Sbjct: 359 SFSKLTSLNVKYNNEKSRDFTRPDLP 384
>gi|189241313|ref|XP_966484.2| PREDICTED: similar to polypyrimidine tract binding protein
[Tribolium castaneum]
Length = 822
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VL IE+M Y ++LD+LH++F FG V KI F KN QALIQYPD +A AK+A
Sbjct: 428 NTVLRVIIEHMIYPISLDILHLIFQRFGKVLKIVTFTKNNSFQALIQYPDTASAQSAKQA 487
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
L+G IY+ C L I YS+ + L++K NND+SRDYT P+ P
Sbjct: 488 LDGQNIYNSC-CTLRIDYSKMSSLNVKYNNDKSRDYTNPNLP 528
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 59/97 (60%), Gaps = 11/97 (11%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+F FG V KI TF K FQAL+Q+ DT +A SAK ALDG++I CTLRI
Sbjct: 450 IFQRFGKVLKIVTFTKNNSFQALIQYPDTASAQSAKQALDGQNIYN-------SCCTLRI 502
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQ 122
YS + L+VK+ + +SRDYTNP LP DA+ Q
Sbjct: 503 DYSKMSSLNVKYNNDKSRDYTNPNLPTG----DANDQ 535
>gi|55669744|pdb|1SJR|A Chain A, Nmr Structure Of Rrm2 From Human Polypyrimidine Tract
Binding Protein Isoform 1 (Ptb1)
Length = 164
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 37 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 96
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 97 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 152
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 65 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 117
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 118 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 148
>gi|131529|sp|P17225.2|PTBP1_MOUSE RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB;
AltName: Full=Heterogeneous nuclear ribonucleoprotein I;
Short=hnRNP I
gi|53553|emb|CAA36321.1| 25kDa nuclear protein [Mus musculus]
Length = 527
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 62/105 (59%), Gaps = 9/105 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGL 127
I +S T L+VK+ + +SRDYT P LP S ++D + + GL
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGL 298
>gi|270013160|gb|EFA09608.1| hypothetical protein TcasGA2_TC011728 [Tribolium castaneum]
Length = 876
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VL IE+M Y ++LD+LH++F FG V KI F KN QALIQYPD +A AK+A
Sbjct: 482 NTVLRVIIEHMIYPISLDILHLIFQRFGKVLKIVTFTKNNSFQALIQYPDTASAQSAKQA 541
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
L+G IY+ C L I YS+ + L++K NND+SRDYT P+ P
Sbjct: 542 LDGQNIYNSC-CTLRIDYSKMSSLNVKYNNDKSRDYTNPNLP 582
>gi|266862|sp|Q00438.1|PTBP1_RAT RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB;
AltName: Full=Heterogeneous nuclear ribonucleoprotein I;
Short=hnRNP I; AltName: Full=Pyrimidine-binding protein;
Short=PYBP
Length = 555
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|332255809|ref|XP_003277021.1| PREDICTED: polypyrimidine tract-binding protein 1 [Nomascus
leucogenys]
Length = 505
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 143 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 202
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 203 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 258
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 111/237 (46%), Gaps = 57/237 (24%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 171 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 223
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AID---------ASGQLSV-------- 125
I +S T L+VK+ + +SRDYT P LP S ++D + LSV
Sbjct: 224 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGKRTASLSVPNVHGALA 283
Query: 126 --------------------GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 165
GL G ++VLL S N + VT L ++F +G V
Sbjct: 284 PLAIPSAAAAAAAAGRIAIPGLAG----AGNSVLLVSNLNPER-VTPQSLFILFGVYGDV 338
Query: 166 QKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
Q++ +F+K AL+Q D A +A L GH ++ + I+ S+H ++ +
Sbjct: 339 QRVKILFNKKE--NALVQMADGNQAQLAMSHLNGHKLHGK---PIRITLSKHQNVQL 390
>gi|145324168|ref|NP_001077673.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
gi|332193842|gb|AEE31963.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
Length = 430
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 109/212 (51%), Gaps = 40/212 (18%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+F FG + K+ A QAL+Q D +A SA N+ P T+R
Sbjct: 25 LFQPFGVITKLVMLR--AKNQALLQMQDVSSAVSALQFF-----------TNVQP-TIRN 70
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
Y V+F SH+ + I+ + + G++ EP + +LL +I +
Sbjct: 71 VY-------VQFSSHQE-----------LTTIEQN------IHGREDEP-NRILLVTIHH 105
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
M Y +T+DVLH VFS +G V+K+ F K+ G QALIQY Q A A+ AL+G IYDG
Sbjct: 106 MLYPITVDVLHQVFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIYDGC 165
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
C+L I +S +L + NNDRSRDYT P+ P
Sbjct: 166 -CQLDIQFSNLEELQVNYNNDRSRDYTNPNLP 196
>gi|149034648|gb|EDL89385.1| polypyrimidine tract binding protein 1, isoform CRA_b [Rattus
norvegicus]
Length = 490
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 133 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 192
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 193 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 248
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 108/228 (47%), Gaps = 44/228 (19%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 161 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 213
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 133
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 214 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 273
Query: 134 -------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDK 173
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 274 SAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQRVKILFNK 332
Query: 174 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
AL+Q D A +A L GH ++ + I+ S+H + +
Sbjct: 333 KE--NALVQMADGSQAQLAMSHLNGHKLHGKS---VRITLSKHQSVQL 375
>gi|148699701|gb|EDL31648.1| mCG13402, isoform CRA_e [Mus musculus]
Length = 454
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 189 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 248
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 249 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 304
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 108/246 (43%), Gaps = 62/246 (25%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 217 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 269
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVG---LDGKKLEPES-NV 138
I +S T L+VK+ + +SRDYT P LP S ++D + + L+G KL +S +
Sbjct: 270 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFAMSHLNGHKLHGKSVRI 329
Query: 139 LLASIENMQY-----------------------------------------------AVT 151
L+ +++Q +V+
Sbjct: 330 TLSKHQSVQLPREGQEDQGLTKDYGSSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVS 389
Query: 152 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 211
D L +FS+ G V K F + ALIQ V+ AV A L H + G L +
Sbjct: 390 EDDLKSLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIELHNHDL--GENHHLRV 447
Query: 212 SYSRHT 217
S+S+ T
Sbjct: 448 SFSKST 453
>gi|26353062|dbj|BAC40161.1| unnamed protein product [Mus musculus]
Length = 299
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|26331660|dbj|BAC29560.1| unnamed protein product [Mus musculus]
gi|148699700|gb|EDL31647.1| mCG13402, isoform CRA_d [Mus musculus]
Length = 489
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 133 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 192
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 193 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 248
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 108/227 (47%), Gaps = 43/227 (18%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 161 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 213
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 133
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 214 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 273
Query: 134 ------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDKN 174
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 274 SAAAAAAASRIAIPGLAGAGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQRVKILFNKK 332
Query: 175 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
AL+Q D A +A L GH ++ + I+ S+H + +
Sbjct: 333 E--NALVQMADGSQAQLAMSHLNGHKLHGKS---VRITLSKHQSVQL 374
>gi|426386368|ref|XP_004059657.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2
[Gorilla gorilla gorilla]
Length = 533
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 289
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 88/183 (48%), Gaps = 39/183 (21%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 133
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 314
Query: 134 -------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDK 173
++VLL S N + VT L ++F +G VQ++ +F +
Sbjct: 315 SAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPER-VTPQSLFILFGVYGDVQRVKILFSR 373
Query: 174 NGG 176
GG
Sbjct: 374 GGG 376
>gi|402765974|ref|NP_071961.2| polypyrimidine tract-binding protein 1 isoform b [Rattus
norvegicus]
gi|149034649|gb|EDL89386.1| polypyrimidine tract binding protein 1, isoform CRA_c [Rattus
norvegicus]
Length = 530
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 108/228 (47%), Gaps = 44/228 (19%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 133
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 313
Query: 134 -------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDK 173
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 314 SAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPER-VTPQSLFILFGVYGDVQRVKILFNK 372
Query: 174 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
AL+Q D A +A L GH ++ + I+ S+H + +
Sbjct: 373 KE--NALVQMADGSQAQLAMSHLNGHKLHGKS---VRITLSKHQSVQL 415
>gi|340726548|ref|XP_003401618.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Bombus
terrestris]
Length = 578
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 111/227 (48%), Gaps = 33/227 (14%)
Query: 19 ASGERAHVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKN-------ALDGRSIPR 71
+ GE H+ FG V + + QA ++ +D A++ N L GR++
Sbjct: 87 SEGEIIHLGVPFGRVTNVLVLK--GKNQAFLEMADENAAATMVNYYASCMAQLRGRAV-- 142
Query: 72 YLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKK 131
+ +S H +L Q+H + +N S + GQ V +
Sbjct: 143 ------------YVQFSNHRELKTD-QTHTNNANSN-------SQVTLPGQNQVAQTQAE 182
Query: 132 LEPESN-VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAV 190
+ N VL +E M Y ++LDVL+ +F+ FG V KI F KN QALIQY D+ +A
Sbjct: 183 TQGGPNTVLRVIVEQMVYPISLDVLYQIFTRFGKVLKIVTFTKNNTFQALIQYADMLSAQ 242
Query: 191 VAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
AK +LEG IY+ C L I YS+ +L++K NND+SRDYT PS P
Sbjct: 243 TAKLSLEGQNIYN-SCCTLRIDYSKMQNLNVKYNNDKSRDYTNPSLP 288
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 67/108 (62%), Gaps = 10/108 (9%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F+ FG V KI TF K FQAL+Q++D +A +AK +L+G++I CTLR
Sbjct: 209 QIFTRFGKVLKIVTFTKNNTFQALIQYADMLSAQTAKLSLEGQNIYNSC-------CTLR 261
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKL 132
I YS +L+VK+ + +SRDYTNP LP + +DA+ S+ L G+ L
Sbjct: 262 IDYSKMQNLNVKYNNDKSRDYTNPSLPTGDANLDAA---SLALGGELL 306
>gi|57002|emb|CAA43202.1| pyrimidine binding protein 1 [Rattus norvegicus]
Length = 530
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 108/228 (47%), Gaps = 44/228 (19%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 133
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 313
Query: 134 -------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDK 173
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 314 SAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPER-VTPQSLFILFGVYGDVQRVKILFNK 372
Query: 174 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
AL++ D A +A L GH ++ + I+ S+H + +
Sbjct: 373 KE--NALVEMADGSQAQLAMSHLNGHKLHGKS---VRITLSKHQSVQL 415
>gi|149034650|gb|EDL89387.1| polypyrimidine tract binding protein 1, isoform CRA_d [Rattus
norvegicus]
Length = 500
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 143 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 202
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 203 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 258
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 108/228 (47%), Gaps = 44/228 (19%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 171 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 223
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 133
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 224 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 283
Query: 134 -------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDK 173
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 284 SAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQRVKILFNK 342
Query: 174 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
AL+Q D A +A L GH ++ + I+ S+H + +
Sbjct: 343 KE--NALVQMADGSQAQLAMSHLNGHKLHGKS---VRITLSKHQSVQL 385
>gi|148699697|gb|EDL31644.1| mCG13402, isoform CRA_b [Mus musculus]
Length = 499
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 143 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 202
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 203 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 258
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 108/227 (47%), Gaps = 43/227 (18%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 171 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 223
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 133
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 224 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 283
Query: 134 ------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDKN 174
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 284 SAAAAAAASRIAIPGLAGAGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQRVKILFNKK 342
Query: 175 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
AL+Q D A +A L GH ++ + I+ S+H + +
Sbjct: 343 E--NALVQMADGSQAQLAMSHLNGHKLHGKS---VRITLSKHQSVQL 384
>gi|159163719|pdb|2ADB|A Chain A, Solution Structure Of Polypyrimidine Tract Binding Protein
Rbd2 Complexed With Cucucu Rna
Length = 148
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 24 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 83
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 84 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 139
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 52 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 104
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 105 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 135
>gi|27806103|ref|NP_776867.1| polypyrimidine tract-binding protein 1 [Bos taurus]
gi|426229471|ref|XP_004008814.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2 [Ovis
aries]
gi|75073578|sp|Q8WN55.1|PTBP1_BOVIN RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB
gi|17298537|gb|AAL38169.1|AF445640_1 polypyrimidine-tract binding protein [Bos taurus]
gi|296485353|tpg|DAA27468.1| TPA: polypyrimidine tract-binding protein 1 [Bos taurus]
Length = 531
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 289
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 108/228 (47%), Gaps = 44/228 (19%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 133
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 314
Query: 134 -------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKI-AMFDK 173
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 315 SAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQRVKVLFNK 373
Query: 174 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
AL+Q D A +A L GH ++ + I+ S+H + +
Sbjct: 374 KE--NALVQMADGSQAQLAMSHLNGHKLHGK---PVRITLSKHQSVQL 416
>gi|194212378|ref|XP_001915461.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1 [Equus caballus]
Length = 596
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 82/140 (58%), Gaps = 5/140 (3%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY + +
Sbjct: 221 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYAEPVS 280
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK L+ IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 281 AQHAKLLLDAQNIYNAR-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL--- 336
Query: 249 QPVPMVGATANQYNGAQFAP 268
M A A+ Y GA F P
Sbjct: 337 -DQTMAAAFASPYAGAGFPP 355
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 108/250 (43%), Gaps = 70/250 (28%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+++ +A AK LD ++I CTLR
Sbjct: 249 QIFSKFGTVLKIITFTKNNQFQALLQYAEPVSAQHAKLLLDAQNIYN-------ARCTLR 301
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS-------------------------AIDA 119
I +S T L+VK+ + +SRDYT P LP S AI
Sbjct: 302 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFASPYAGAGFPPTFAIPQ 361
Query: 120 SGQLSV---------------------------GLDGKKLEPESNVLLASIENMQYAVTL 152
+ LSV GL G ++VLL S N + VT
Sbjct: 362 AAGLSVPNVHGALAPLAIPSAAAAAAAGRIALPGLAGAG----NSVLLVSNLNPER-VTP 416
Query: 153 DVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 211
L ++F +G VQ++ +F+K AL+Q D A +A L GH ++ + I
Sbjct: 417 QSLFILFGVYGDVQRVKILFNKKE--NALVQMADGSQAQLAMSHLNGHKLHGK---PVRI 471
Query: 212 SYSRHTDLSI 221
+ S+H ++ +
Sbjct: 472 TLSKHQNVQL 481
>gi|28949889|emb|CAD70621.1| polypyrimidine track-binding protein homologue [Cicer arietinum]
Length = 442
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 106/220 (48%), Gaps = 53/220 (24%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSA----KNA---LDGRSIPRYLLPEN 77
+F FG + K+ QAL+Q D +A SA NA + GR++
Sbjct: 24 QLFQTFGVITKLVMLRTKN--QALLQMEDIPSAISALQFYANAQPSIRGRNV-------- 73
Query: 78 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 137
+ +S+H +L+ QS G+ EP +
Sbjct: 74 ------YVQFSSHKELTTMDQSQ----------------------------GRDDEP-NR 98
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
+LL ++ MQY +T+DVL VFS G V+KI F K+ G QALIQY Q+AV A+ +L+
Sbjct: 99 ILLVTVHQMQYPITVDVLQQVFSPHGYVEKIVTFQKSAGFQALIQYESRQSAVTARSSLQ 158
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
G IYDG C+L I +S +L + NNDRSRDYT P+ P
Sbjct: 159 GRNIYDGC-CQLDIQFSNLDELQVNYNNDRSRDYTNPNLP 197
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 111/230 (48%), Gaps = 50/230 (21%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
VFS G+V KI TF+K+AGFQAL+Q+ ++A +A+++L GR+I G C L
Sbjct: 118 QVFSPHGYVEKIVTFQKSAGFQALIQYESRQSAVTARSSLQGRNIYD-------GCCQLD 170
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA------------------------------- 113
I +S +L V + + RSRDYTNP LP
Sbjct: 171 IQFSNLDELQVNYNNDRSRDYTNPNLPTEQKGRPSHSGYGDTGMHGVQGSGARPGGFSQM 230
Query: 114 --PSAIDAS--GQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 169
+AI+A+ G L G+ G VL+A++ + + D L +FS +G + +I
Sbjct: 231 TNAAAIEAAFGGDLPPGITGTN--DRCTVLVANLNPDR--IDEDKLFNLFSIYGNIVRIK 286
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDL 219
+ +N AL+Q D A +A L+G ++ +L +++S+H ++
Sbjct: 287 LL-RNKPDHALVQMGDGFQAELAVYFLKGAMLFGK---RLEVNFSKHPNI 332
>gi|74196849|dbj|BAE43140.1| unnamed protein product [Mus musculus]
Length = 530
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 108/228 (47%), Gaps = 44/228 (19%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 133
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 313
Query: 134 -------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDK 173
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 314 SAAAAAAAASRIAIPGLAGAGNSVLLVSNLNPER-VTPQSLFILFGVYGDVQRVKILFNK 372
Query: 174 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
AL+Q D A +A L GH ++ + I+ S+H + +
Sbjct: 373 KE--NALVQMADGSQAQLAMSHLNGHKLHGKS---VRITLSKHQSVQL 415
>gi|116517303|ref|NP_032982.2| polypyrimidine tract-binding protein 1 isoform 2 [Mus musculus]
gi|26336949|dbj|BAC32158.1| unnamed protein product [Mus musculus]
gi|26342100|dbj|BAC34712.1| unnamed protein product [Mus musculus]
gi|26349809|dbj|BAC38544.1| unnamed protein product [Mus musculus]
gi|74211646|dbj|BAE29183.1| unnamed protein product [Mus musculus]
gi|74212275|dbj|BAE40295.1| unnamed protein product [Mus musculus]
gi|148699696|gb|EDL31643.1| mCG13402, isoform CRA_a [Mus musculus]
gi|148699698|gb|EDL31645.1| mCG13402, isoform CRA_a [Mus musculus]
Length = 529
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 108/227 (47%), Gaps = 43/227 (18%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 133
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 313
Query: 134 ------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDKN 174
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 314 SAAAAAAASRIAIPGLAGAGNSVLLVSNLNPER-VTPQSLFILFGVYGDVQRVKILFNKK 372
Query: 175 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
AL+Q D A +A L GH ++ + I+ S+H + +
Sbjct: 373 E--NALVQMADGSQAQLAMSHLNGHKLHGKS---VRITLSKHQSVQL 414
>gi|119581562|gb|EAW61158.1| polypyrimidine tract binding protein 1, isoform CRA_g [Homo
sapiens]
Length = 501
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 144 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 203
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 204 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 259
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 109/228 (47%), Gaps = 44/228 (19%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 172 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 224
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 133
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 225 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 284
Query: 134 -------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDK 173
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 285 SAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQRVKILFNK 343
Query: 174 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
AL+Q D A +A L GH ++ + I+ S+H ++ +
Sbjct: 344 KE--NALVQMADGNQAQLAMSHLNGHKLHGK---PIRITLSKHQNVQL 386
>gi|62087400|dbj|BAD92147.1| polypyrimidine tract-binding protein 1 isoform c variant [Homo
sapiens]
Length = 329
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 191 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 250
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 251 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 306
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 219 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 271
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 272 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 302
>gi|73987401|ref|XP_868641.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 8 [Canis
lupus familiaris]
Length = 531
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 289
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 109/228 (47%), Gaps = 44/228 (19%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 133
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 314
Query: 134 -------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDK 173
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 315 SAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPER-VTPQSLFILFGVYGDVQRVKILFNK 373
Query: 174 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
AL+Q D A +A L GH ++ + I+ S+H ++ +
Sbjct: 374 KE--NALVQMADGSQAQLAMSHLNGHKLHGK---PVRITLSKHQNVQL 416
>gi|320170468|gb|EFW47367.1| polypyrimidine tract-binding protein PTB-2 [Capsaspora owczarzaki
ATCC 30864]
Length = 546
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Query: 119 ASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQ 178
ASG S G + EP+ VL I N+ Y VTLDVLH +FS FG V +I F+KN Q
Sbjct: 158 ASGSHS-GNNDSSFEPKP-VLRVEIHNVLYVVTLDVLHQIFSKFGNVLRIITFNKNNLFQ 215
Query: 179 ALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
A IQY D+ +A AK +L+G IY G C+L I YSR +L+++ NND+ RDYT P+ P
Sbjct: 216 AFIQYADLNSAKNAKSSLDGQSIYTGC-CQLRIFYSRLDELNVRFNNDKCRDYTNPNLPT 274
Query: 239 VNSQP 243
++ P
Sbjct: 275 GDNTP 279
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+FS FG V +I TF K FQA +Q++D +A +AK++LDG+SI G C LRI
Sbjct: 195 IFSKFGNVLRIITFNKNNLFQAFIQYADLNSAKNAKSSLDGQSIY-------TGCCQLRI 247
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLP 111
YS +L+V+F + + RDYTNP LP
Sbjct: 248 FYSRLDELNVRFNNDKCRDYTNPNLP 273
>gi|14165466|ref|NP_114368.1| polypyrimidine tract-binding protein 1 isoform c [Homo sapiens]
gi|332850814|ref|XP_003316017.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2 [Pan
troglodytes]
gi|131528|sp|P26599.1|PTBP1_HUMAN RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB;
AltName: Full=57 kDa RNA-binding protein PPTB-1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein I;
Short=hnRNP I
gi|35768|emb|CAA43973.1| polypirimidine tract binding protein [Homo sapiens]
gi|35774|emb|CAA43056.1| polypyrimidine tract-binding protein (pPTB) [Homo sapiens]
gi|4096061|gb|AAC99798.1| PTB_HUMAN [Homo sapiens]
gi|13325140|gb|AAH04383.1| Polypyrimidine tract binding protein 1 [Homo sapiens]
gi|119581559|gb|EAW61155.1| polypyrimidine tract binding protein 1, isoform CRA_d [Homo
sapiens]
gi|261860774|dbj|BAI46909.1| polypyrimidine tract binding protein 1 [synthetic construct]
gi|410218530|gb|JAA06484.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
gi|410301206|gb|JAA29203.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
Length = 531
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 289
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 109/228 (47%), Gaps = 44/228 (19%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 133
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 314
Query: 134 -------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDK 173
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 315 SAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQRVKILFNK 373
Query: 174 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
AL+Q D A +A L GH ++ + I+ S+H ++ +
Sbjct: 374 KE--NALVQMADGNQAQLAMSHLNGHKLHGK---PIRITLSKHQNVQL 416
>gi|402903488|ref|XP_003914597.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2 [Papio
anubis]
gi|380814966|gb|AFE79357.1| polypyrimidine tract-binding protein 1 isoform c [Macaca mulatta]
gi|384948418|gb|AFI37814.1| polypyrimidine tract-binding protein 1 isoform c [Macaca mulatta]
Length = 530
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 109/228 (47%), Gaps = 44/228 (19%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 133
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 313
Query: 134 -------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDK 173
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 314 SAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQRVKILFNK 372
Query: 174 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
AL+Q D A +A L GH ++ + I+ S+H ++ +
Sbjct: 373 KE--NALVQMADGNQAQLAMSHLNGHKLHGK---PIRITLSKHQNVQL 415
>gi|357133525|ref|XP_003568375.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Brachypodium distachyon]
Length = 444
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 108/226 (47%), Gaps = 49/226 (21%)
Query: 19 ASGERAHVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKN-------ALDGRSIPR 71
A + + FG V KI A QAL+Q D ++ SA ++ GR+I
Sbjct: 18 AEADLLQLLQPFGAVSKIVMLR--AKNQALLQMQDIHSSVSALQYYTTVQPSVRGRNI-- 73
Query: 72 YLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKK 131
+ +S+H +L+ SH G + +
Sbjct: 74 ------------YMQFSSHQELTTDQSSH-------------------------GRNSDQ 96
Query: 132 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
+ +LLA+I +M Y +T++VLH VF A+G V+KI F+K+ G QALIQY Q AV
Sbjct: 97 DSEPNRILLATIHHMIYPITVEVLHQVFKAYGYVEKIVTFNKSAGFQALIQYQSRQEAVE 156
Query: 192 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
A AL G IYDG C+L I YS ++L + NNDRSRD+T PS P
Sbjct: 157 AFGALHGRNIYDGC-CQLDIQYSNLSELQVHYNNDRSRDFTNPSLP 201
>gi|354504485|ref|XP_003514305.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Cricetulus
griseus]
Length = 322
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 74/117 (63%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 129 GMAMAGQSPVLRILVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNRFQALLQYADPVS 188
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK +L+G IY +C L I +S+ T L +K NND+SRDYT P P +SQPS+
Sbjct: 189 AQHAKLSLDGQNIYK-AWCSLRIDFSKLTSLYVKYNNDKSRDYTRPDLPSGDSQPSL 244
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I + C+LR
Sbjct: 157 QIFSKFGTVLKIITFTKNNRFQALLQYADPVSAQHAKLSLDGQNIYK-------AWCSLR 209
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L VK+ + +SRDYT P LP S
Sbjct: 210 IDFSKLTSLYVKYNNDKSRDYTRPDLPSGDS 240
>gi|348550212|ref|XP_003460926.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 2
[Cavia porcellus]
Length = 531
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GLAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNSQFQALLQYADPVS 233
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 289
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 115/232 (49%), Gaps = 52/232 (22%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K + FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNSQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP--------------------------VAPSAI- 117
I +S T L+VK+ + +SRDYT P LP +AP AI
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 314
Query: 118 ------DASGQLSV-GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA- 169
A+G++ + GL G ++VLL S N + VT L ++F +G VQ++
Sbjct: 315 SAAAAAAAAGRIGIPGLAG----AGNSVLLVSNLNPER-VTPQSLFILFGVYGDVQRVKI 369
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
+F+K AL+Q D A +A L GH ++ + I+ S+H ++ +
Sbjct: 370 LFNKKE--NALVQMADGSQAQLAMSHLNGHKLHGK---PIRITLSKHQNVQL 416
>gi|58331982|ref|NP_001011140.1| polypyrimidine tract binding protein 1 [Xenopus (Silurana)
tropicalis]
gi|54261503|gb|AAH84469.1| polypyrimidine tract binding protein 1 [Xenopus (Silurana)
tropicalis]
gi|89272472|emb|CAJ82472.1| polypyrimidine tract binding protein 1 [Xenopus (Silurana)
tropicalis]
Length = 554
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 84/144 (58%), Gaps = 7/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVL +FS FG V KI F KN QAL+QY D +
Sbjct: 177 GMAMSGQSPVLRIIVENLFYPVTLDVLQQIFSKFGTVLKIITFTKNNQFQALLQYGDPVS 236
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P + QPS+
Sbjct: 237 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDGQPSL--D 293
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
Q + GA +AN Y A F P
Sbjct: 294 QTIAAFGAPGLISANPYASAGFPP 317
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D +A AK +LDG++I CTLR
Sbjct: 205 QIFSKFGTVLKIITFTKNNQFQALLQYGDPVSAQHAKLSLDGQNIYN-------ACCTLR 257
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRDYT P LP
Sbjct: 258 IDFSKLTSLNVKYNNDKSRDYTRPDLP 284
>gi|19911240|dbj|BAB86943.1| polypirimidine tract binding protein [Mus musculus]
Length = 528
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK +L+G IY+ C L + +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRVDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 108/227 (47%), Gaps = 43/227 (18%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 253
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 133
+ +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 254 VDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 313
Query: 134 ------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDKN 174
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 314 SAAAAAAASRIAIPGLAGAGNSVLLVSNLNPER-VTPQSLFILFGVYGDVQRVKILFNKK 372
Query: 175 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
AL+Q D A +A L GH ++ + I+ S+H + +
Sbjct: 373 E--NALVQMADGSQAQLAMSHLNGHKLHGK---SVRITLSKHQSVQL 414
>gi|344251032|gb|EGW07136.1| Polypyrimidine tract-binding protein 1 [Cricetulus griseus]
Length = 323
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 74/117 (63%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 169 GMAMAGQSPVLRILVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNRFQALLQYADPVS 228
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK +L+G IY +C L I +S+ T L +K NND+SRDYT P P +SQPS+
Sbjct: 229 AQHAKLSLDGQNIYK-AWCSLRIDFSKLTSLYVKYNNDKSRDYTRPDLPSGDSQPSL 284
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 62/105 (59%), Gaps = 9/105 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I + C+LR
Sbjct: 197 QIFSKFGTVLKIITFTKNNRFQALLQYADPVSAQHAKLSLDGQNIYK-------AWCSLR 249
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGL 127
I +S T L VK+ + +SRDYT P LP S ++D + + GL
Sbjct: 250 IDFSKLTSLYVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGL 294
>gi|431922192|gb|ELK19283.1| Polypyrimidine tract-binding protein 1 [Pteropus alecto]
Length = 566
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY + +
Sbjct: 180 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYAEPVS 239
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 240 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 295
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 62/105 (59%), Gaps = 9/105 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+++ +A AK +LDG++I CTLR
Sbjct: 208 QIFSKFGTVLKIITFTKNNQFQALLQYAEPVSAQHAKLSLDGQNIYN-------ACCTLR 260
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGL 127
I +S T L+VK+ + +SRDYT P LP S ++D + + GL
Sbjct: 261 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGL 305
>gi|224087659|ref|XP_002196400.1| PREDICTED: polypyrimidine tract-binding protein 1 [Taeniopygia
guttata]
Length = 525
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +A AK
Sbjct: 150 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNHQFQALLQYADPMSAQHAKL 209
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
+L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQP++
Sbjct: 210 SLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPTL 259
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 172 QIFSKFGTVLKIITFTKNHQFQALLQYADPMSAQHAKLSLDGQNIYN-------ACCTLR 224
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 225 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 255
>gi|148680405|gb|EDL12352.1| polypyrimidine tract binding protein 2, isoform CRA_b [Mus
musculus]
Length = 529
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 89/167 (53%), Gaps = 14/167 (8%)
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP------ESNV 138
I YS H +L ++ + N V A+ A + L G + +S V
Sbjct: 125 IQYSNHKEL-------KTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPV 177
Query: 139 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 198
L I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK AL+G
Sbjct: 178 LRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDG 237
Query: 199 HCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 238 QNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 283
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 196 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 248
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 124
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 249 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 308
Query: 125 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 169
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 309 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 366
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 216
+ N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 367 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 409
>gi|148680404|gb|EDL12351.1| polypyrimidine tract binding protein 2, isoform CRA_a [Mus
musculus]
Length = 528
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 89/167 (53%), Gaps = 14/167 (8%)
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP------ESNV 138
I YS H +L ++ + N V A+ A + L G + +S V
Sbjct: 125 IQYSNHKEL-------KTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPV 177
Query: 139 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 198
L I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK AL+G
Sbjct: 178 LRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDG 237
Query: 199 HCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 238 QNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 283
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 196 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 248
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 124
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 249 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 308
Query: 125 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 169
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 309 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 366
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 216
+ N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 367 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 409
>gi|350418407|ref|XP_003491847.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Bombus
impatiens]
Length = 578
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 111/227 (48%), Gaps = 33/227 (14%)
Query: 19 ASGERAHVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKN-------ALDGRSIPR 71
+ GE H+ FG V + + QA ++ +D A++ N L GR++
Sbjct: 87 SEGEIIHLGVPFGRVTNVLVLK--GKNQAFLEMADENAAATMVNYYASCMAQLRGRAV-- 142
Query: 72 YLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKK 131
+ +S H +L Q+H + +N + + GQ V +
Sbjct: 143 ------------YVQFSNHRELKTD-QTHTNNANSN-------NQVALPGQNQVAQTQAE 182
Query: 132 LEPESN-VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAV 190
+ N VL +E M Y ++LDVL+ +F+ FG V KI F KN QALIQY D+ +A
Sbjct: 183 TQGGPNTVLRVIVEQMVYPISLDVLYQIFTRFGKVLKIVTFTKNNTFQALIQYADMLSAQ 242
Query: 191 VAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
AK +LEG IY+ C L I YS+ +L++K NND+SRDYT PS P
Sbjct: 243 TAKLSLEGQNIYN-SCCTLRIDYSKMQNLNVKYNNDKSRDYTNPSLP 288
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 67/108 (62%), Gaps = 10/108 (9%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F+ FG V KI TF K FQAL+Q++D +A +AK +L+G++I CTLR
Sbjct: 209 QIFTRFGKVLKIVTFTKNNTFQALIQYADMLSAQTAKLSLEGQNIYNSC-------CTLR 261
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKL 132
I YS +L+VK+ + +SRDYTNP LP + +DA+ S+ L G+ L
Sbjct: 262 IDYSKMQNLNVKYNNDKSRDYTNPSLPTGDANLDAA---SLALGGELL 306
>gi|53850638|ref|NP_001005555.1| polypyrimidine tract-binding protein 2 [Rattus norvegicus]
gi|81910658|sp|Q66H20.1|PTBP2_RAT RecName: Full=Polypyrimidine tract-binding protein 2; AltName:
Full=Neural polypyrimidine tract-binding protein;
AltName: Full=PTB-like protein
gi|93140675|sp|Q91Z31.2|PTBP2_MOUSE RecName: Full=Polypyrimidine tract-binding protein 2; AltName:
Full=Brain-enriched polypyrimidine tract-binding
protein; Short=Brain-enriched PTB; AltName: Full=Neural
polypyrimidine tract-binding protein; AltName:
Full=RRM-type RNA-binding protein brPTB
gi|51859313|gb|AAH82076.1| Polypyrimidine tract binding protein 2 [Rattus norvegicus]
gi|149025819|gb|EDL82062.1| polypyrimidine tract binding protein 2, isoform CRA_b [Rattus
norvegicus]
Length = 531
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 89/167 (53%), Gaps = 14/167 (8%)
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP------ESNV 138
I YS H +L ++ + N V A+ A + L G + +S V
Sbjct: 128 IQYSNHKEL-------KTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPV 180
Query: 139 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 198
L I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK AL+G
Sbjct: 181 LRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDG 240
Query: 199 HCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 241 QNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 124
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 311
Query: 125 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 169
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 312 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 369
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 216
+ N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 370 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 412
>gi|426219707|ref|XP_004004060.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Ovis
aries]
Length = 526
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 102/192 (53%), Gaps = 15/192 (7%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 143 EGTILPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPL 202
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 247
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 203 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL-- 259
Query: 248 QQPVPMV------GATANQYNGAQ-FAPPP--PEQPMMHQPTAAGWGAVPP-ASQSMPMM 297
+P PM G ++ Y GA FAP P+ + P G GA+ P A S +
Sbjct: 260 -EP-PMAAAFGAPGIISSPYAGAAGFAPAIGFPQATGLSVPAGLGPGALGPLAITSSAVT 317
Query: 298 GNHPYMPPGSMP 309
G G MP
Sbjct: 318 GRMAIPGAGGMP 329
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 172 QIFSKFGTVLKIITFTKNNQFQALLQYADPLNAHYAKMALDGQNIYNAC-------CTLR 224
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 113
I +S T L+VK+ + +SRD+T LP
Sbjct: 225 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 253
>gi|13786186|ref|NP_112636.1| polypyrimidine tract-binding protein 3 [Rattus norvegicus]
gi|50401225|sp|Q9Z118.1|PTBP3_RAT RecName: Full=Polypyrimidine tract-binding protein 3; AltName:
Full=Regulator of differentiation 1; Short=Rod1
gi|4514552|dbj|BAA75465.1| Rod1 [Rattus norvegicus]
Length = 523
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 100/209 (47%), Gaps = 38/209 (18%)
Query: 120 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 175
SG LS+ +G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN
Sbjct: 130 SGNLSLPGATSNEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNN 189
Query: 176 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 190 QFQALLQYADPVNAQYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLD 248
Query: 236 TPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMP 295
P + QPS+ E PM AA +GA P S P
Sbjct: 249 LPTGDGQPSL--------------------------EPPM-----AAAFGA--PGIMSSP 275
Query: 296 MMGNHPYMPPGSMPMGPGMMQMHMPGQSG 324
G + P + P G+ +PG G
Sbjct: 276 YAGAAGFAPAIAFPQAAGLSVSAVPGALG 304
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 171 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYN-------ACCTLR 223
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRD+T LP
Sbjct: 224 IDFSKLTSLNVKYNNDKSRDFTRLDLP 250
>gi|71896363|ref|NP_001026106.1| polypyrimidine tract-binding protein 1 [Gallus gallus]
gi|60098495|emb|CAH65078.1| hypothetical protein RCJMB04_3b17 [Gallus gallus]
Length = 526
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 84/144 (58%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 144 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPMS 203
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P ++QP L Q
Sbjct: 204 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPP-LDQ 261
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA A+ Y GA F P
Sbjct: 262 TMAAAFGAPGIIPASPYAGAGFPP 285
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 172 QIFSKFGTVLKIITFTKNNQFQALLQYADPMSAQHAKLSLDGQNIYN-------ACCTLR 224
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRDYT P LP
Sbjct: 225 IDFSKLTSLNVKYNNDKSRDYTRPDLP 251
>gi|25392158|pir||JC7526 polypyrimidine tract-binding protein-like protein - rat
Length = 532
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 89/167 (53%), Gaps = 14/167 (8%)
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP------ESNV 138
I YS H +L ++ + N V A+ A + L G + +S V
Sbjct: 128 IQYSNHKEL-------KTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPV 180
Query: 139 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 198
L I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK AL+G
Sbjct: 181 LRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDG 240
Query: 199 HCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 241 QNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 124
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 311
Query: 125 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 169
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 312 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 369
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 216
+ N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 370 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 412
>gi|326934420|ref|XP_003213288.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Meleagris
gallopavo]
Length = 526
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 84/144 (58%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 144 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPMS 203
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P ++QP L Q
Sbjct: 204 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPP-LDQ 261
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA A+ Y GA F P
Sbjct: 262 TMAAAFGAPGIIPASPYAGAGFPP 285
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 172 QIFSKFGTVLKIITFTKNNQFQALLQYADPMSAQHAKLSLDGQNIYN-------ACCTLR 224
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRDYT P LP
Sbjct: 225 IDFSKLTSLNVKYNNDKSRDYTRPDLP 251
>gi|74178228|dbj|BAE29899.1| unnamed protein product [Mus musculus]
Length = 529
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 74/117 (63%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK +L G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLGGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 107/227 (47%), Gaps = 43/227 (18%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +L G++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLGGQNIYN-------ACCTLR 253
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 133
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 254 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 313
Query: 134 ------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDKN 174
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 314 SAAAAAAASRIAIPGLAGAGNSVLLVSNLNPER-VTPQSLFILFGVYGDVQRVKILFNKK 372
Query: 175 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
AL+Q D A +A L GH ++ + I+ S+H + +
Sbjct: 373 E--NALVQMADGSQAQLAMSHLNGHKLHGK---SVRITLSKHQSVQL 414
>gi|9507003|ref|NP_062423.1| polypyrimidine tract-binding protein 2 [Mus musculus]
gi|8358154|gb|AAF21807.2|AF095718_1 RRM-type RNA-binding protein brPTB [Mus musculus]
gi|5824110|emb|CAB54073.1| PTB-like protein [Rattus rattus]
gi|22711857|tpg|DAA00061.1| TPA_exp: splicing regulator nPTB2 [Mus musculus]
gi|74209570|dbj|BAE23317.1| unnamed protein product [Mus musculus]
Length = 532
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 89/167 (53%), Gaps = 14/167 (8%)
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP------ESNV 138
I YS H +L ++ + N V A+ A + L G + +S V
Sbjct: 128 IQYSNHKEL-------KTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPV 180
Query: 139 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 198
L I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK AL+G
Sbjct: 181 LRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDG 240
Query: 199 HCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 241 QNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 101/223 (45%), Gaps = 46/223 (20%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 124
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 311
Query: 125 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 169
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 312 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 369
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 212
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 370 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 410
>gi|16307418|gb|AAH10255.1| Polypyrimidine tract binding protein 2 [Mus musculus]
Length = 531
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 89/167 (53%), Gaps = 14/167 (8%)
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP------ESNV 138
I YS H +L ++ + N V A+ A + L G + +S V
Sbjct: 128 IQYSNHKEL-------KTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPV 180
Query: 139 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 198
L I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK AL+G
Sbjct: 181 LRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDG 240
Query: 199 HCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 241 QNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 124
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 311
Query: 125 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 169
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 312 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 369
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 216
+ N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 370 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 412
>gi|380018871|ref|XP_003693343.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Apis
florea]
Length = 578
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 112/226 (49%), Gaps = 31/226 (13%)
Query: 19 ASGERAHVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKN-------ALDGRSIPR 71
+ GE H+ FG V + + QA ++ +D A++ N L GR++
Sbjct: 87 SEGEIIHLGIPFGRVTNVLVLK--GKNQAFLEMADENAAATMVNYYASCMAQLRGRAV-- 142
Query: 72 YLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKK 131
+ +S H +L Q+H + +N + AI Q++ +
Sbjct: 143 ------------YVQFSNHRELKTD-QTHTNNANSNNQV-----AIPGQNQVAQTQAETQ 184
Query: 132 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
P + VL +E M Y ++LDVL+ +F+ FG V KI F KN QALIQY D+ +A
Sbjct: 185 GGPNT-VLRVIVEQMVYPISLDVLYQIFTRFGKVLKIVTFTKNNTFQALIQYADMLSAQT 243
Query: 192 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
AK +LEG IY+ C L I YS+ +L++K NND+SRDYT PS P
Sbjct: 244 AKLSLEGQNIYN-SCCTLRIDYSKMQNLNVKYNNDKSRDYTNPSLP 288
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 67/108 (62%), Gaps = 10/108 (9%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F+ FG V KI TF K FQAL+Q++D +A +AK +L+G++I CTLR
Sbjct: 209 QIFTRFGKVLKIVTFTKNNTFQALIQYADMLSAQTAKLSLEGQNIYN-------SCCTLR 261
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKL 132
I YS +L+VK+ + +SRDYTNP LP + +DA+ S+ L G+ L
Sbjct: 262 IDYSKMQNLNVKYNNDKSRDYTNPSLPTGDANLDAA---SLALGGELL 306
>gi|149037108|gb|EDL91639.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b
[Rattus norvegicus]
gi|149037109|gb|EDL91640.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b
[Rattus norvegicus]
Length = 514
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 100/209 (47%), Gaps = 38/209 (18%)
Query: 120 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 175
SG LS+ +G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN
Sbjct: 121 SGNLSLPGATSNEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNN 180
Query: 176 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 181 QFQALLQYADPVNAQYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLD 239
Query: 236 TPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMP 295
P + QPS+ E PM AA +GA P S P
Sbjct: 240 LPTGDGQPSL--------------------------EPPM-----AAAFGA--PGIMSSP 266
Query: 296 MMGNHPYMPPGSMPMGPGMMQMHMPGQSG 324
G + P + P G+ +PG G
Sbjct: 267 YAGAAGFAPAIAFPQAAGLSVSAVPGALG 295
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 162 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYN-------ACCTLR 214
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRD+T LP
Sbjct: 215 IDFSKLTSLNVKYNNDKSRDFTRLDLP 241
>gi|22329999|ref|NP_175010.2| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
gi|145324166|ref|NP_001077672.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
gi|75323651|sp|Q6ICX4.1|PTBP3_ARATH RecName: Full=Polypyrimidine tract-binding protein homolog 3
gi|48525347|gb|AAT44975.1| At1g43190 [Arabidopsis thaliana]
gi|50198952|gb|AAT70479.1| At1g43190 [Arabidopsis thaliana]
gi|110737368|dbj|BAF00629.1| hypothetical protein [Arabidopsis thaliana]
gi|332193840|gb|AEE31961.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
gi|332193841|gb|AEE31962.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
Length = 432
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 110/212 (51%), Gaps = 38/212 (17%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+F FG + K+ A QAL+Q D +A SA N+ P T+R
Sbjct: 25 LFQPFGVITKLVMLR--AKNQALLQMQDVSSAVSALQFF-----------TNVQP-TIR- 69
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
++ V+F SH+ + I+ + + G++ EP + +LL +I +
Sbjct: 70 ----GRNVYVQFSSHQE-----------LTTIEQN------IHGREDEP-NRILLVTIHH 107
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
M Y +T+DVLH VFS +G V+K+ F K+ G QALIQY Q A A+ AL+G IYDG
Sbjct: 108 MLYPITVDVLHQVFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIYDGC 167
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
C+L I +S +L + NNDRSRDYT P+ P
Sbjct: 168 -CQLDIQFSNLEELQVNYNNDRSRDYTNPNLP 198
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 111/219 (50%), Gaps = 39/219 (17%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFS +GFV K+ TF+K+AGFQAL+Q+ + A+SA+ AL GR+I G C L I
Sbjct: 120 VFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIYD-------GCCQLDI 172
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVA----------------------PSAIDAS--G 121
+S +L V + + RSRDYTNP LP SAI A+ G
Sbjct: 173 QFSNLEELQVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTGVAYPQMANTSAIAAAFGG 232
Query: 122 QLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALI 181
L G+ G VL++++ ++ D L +FS +G + +I + +N AL+
Sbjct: 233 GLPPGITGTN--DRCTVLVSNLN--ADSIDEDKLFNLFSLYGNIVRIKLL-RNKPDHALV 287
Query: 182 QYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 220
Q D A +A L+G ++ +L +++S+H +++
Sbjct: 288 QMGDGFQAELAVHFLKGAMLFGK---RLEVNFSKHPNIT 323
>gi|417402381|gb|JAA48040.1| Putative hnrnp-l/ptb/hephaestus splicing factor family [Desmodus
rotundus]
Length = 531
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY + +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYAEPVS 233
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 289
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 109/228 (47%), Gaps = 44/228 (19%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+++ +A AK +LDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYAEPVSAQHAKLSLDGQNIYN-------ACCTLR 254
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 133
I +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 314
Query: 134 -------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDK 173
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 315 SAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPER-VTPQSLFILFGVYGDVQRVKILFNK 373
Query: 174 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
AL+Q D A +A L GH ++ + I+ S+H ++ +
Sbjct: 374 KE--NALVQMADGSQAQLAMSHLNGHKLHGK---PVRITLSKHQNVQL 416
>gi|357623431|gb|EHJ74585.1| putative polypyrimidine tract binding protein [Danaus plexippus]
Length = 621
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 83/139 (59%), Gaps = 6/139 (4%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VL IE+M Y + LDVL+ +F +G V KI F KN QALIQYPD +A +AK A
Sbjct: 242 NTVLRVIIEHMLYPIVLDVLYSIFQRYGKVLKIVTFTKNNSFQALIQYPDTGSAQMAKTA 301
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQP-SILGQQPVPMV 254
L+G IY+ G C L I YS+ T L++K NND+SRDYT P+ P + +L + +P+
Sbjct: 302 LDGQNIYN-GCCTLRIDYSKMTCLNVKYNNDKSRDYTNPTLPSGDGDAHQLLTSELMPLR 360
Query: 255 G----ATANQYNGAQFAPP 269
A++ +G APP
Sbjct: 361 AHLALNLASRMSGGVLAPP 379
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+F +G V KI TF K FQAL+Q+ DT +A AK ALDG++I G CTLRI
Sbjct: 264 IFQRYGKVLKIVTFTKNNSFQALIQYPDTGSAQMAKTALDGQNIYN-------GCCTLRI 316
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLP 111
YS T L+VK+ + +SRDYTNP LP
Sbjct: 317 DYSKMTCLNVKYNNDKSRDYTNPTLP 342
>gi|116175255|ref|NP_001070683.1| regulator of differentiation 1 [Sus scrofa]
gi|115371761|gb|ABI96205.1| ROD1 [Sus scrofa]
Length = 523
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 95/171 (55%), Gaps = 14/171 (8%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 140 EGTILPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPL 199
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 247
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 200 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL-- 256
Query: 248 QQPVPMV------GATANQYNGAQ-FAPPP--PEQPMMHQPTAAGWGAVPP 289
+P PM G ++ Y GA FAP P+ + P G GA+ P
Sbjct: 257 -EP-PMAAAFGAPGIISSPYAGAAGFAPAIGFPQATGLSVPAGLGPGALGP 305
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 169 QIFSKFGTVLKIITFTKNNQFQALLQYADPLNAHYAKMALDGQNIYNAC-------CTLR 221
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 113
I +S T L+VK+ + +SRD+T LP
Sbjct: 222 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 250
>gi|449508136|ref|XP_002190438.2| PREDICTED: polypyrimidine tract-binding protein 2 [Taeniopygia
guttata]
Length = 537
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 72/111 (64%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+Q+ D A AK+
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQFGDPVNAQQAKQ 236
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPTL 286
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 105/237 (44%), Gaps = 53/237 (22%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+QF D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQFGDPVNAQQAKQALDGQNIYN-------ACCTLR 251
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 122
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPTLDPAIAAAFAKETSLLGLPVAAVPGA 311
Query: 123 LS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 164
LS VG+ G + +L++++ + VT L +F +G
Sbjct: 312 LSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGD 369
Query: 165 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
VQ++ + N ALIQ D + +A L G +Y G + ++ S+H + +
Sbjct: 370 VQRVKIL-YNKKDSALIQMADGNQSQLAMSHLNGQKMY-GKIIR--VTLSKHQSVQL 422
>gi|348586487|ref|XP_003479000.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Cavia
porcellus]
Length = 581
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 226 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 285
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 286 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 335
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 101/223 (45%), Gaps = 46/223 (20%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 248 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 300
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 124
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 301 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 360
Query: 125 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 169
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 361 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 418
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 212
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 419 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 459
>gi|149037107|gb|EDL91638.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_a
[Rattus norvegicus]
Length = 528
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 95/197 (48%), Gaps = 34/197 (17%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 173 EGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 232
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 247
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 233 NAQYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL-- 289
Query: 248 QQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGS 307
E PM AA +GA P S P G + P +
Sbjct: 290 ------------------------EPPM-----AAAFGA--PGIMSSPYAGAAGFAPAIA 318
Query: 308 MPMGPGMMQMHMPGQSG 324
P G+ +PG G
Sbjct: 319 FPQAAGLSVSAVPGALG 335
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYN-------ACCTLR 254
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRD+T LP
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDFTRLDLP 281
>gi|410967802|ref|XP_003990404.1| PREDICTED: polypyrimidine tract-binding protein 2 [Felis catus]
Length = 566
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 211 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 270
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 271 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 320
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 101/223 (45%), Gaps = 46/223 (20%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 233 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 285
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 124
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 286 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 345
Query: 125 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 169
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 346 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 403
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 212
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 404 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 444
>gi|157137151|ref|XP_001663911.1| polypyrimidine tract binding protein [Aedes aegypti]
gi|108869791|gb|EAT34016.1| AAEL013723-PA [Aedes aegypti]
Length = 539
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VL +E++ Y V+LD+L+ +F FG V KI F KN QALIQYPD TA +AK+
Sbjct: 151 NTVLRVIVESLLYPVSLDILYQIFQRFGKVLKIVTFTKNNSFQALIQYPDAATAQLAKQT 210
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
L+G IY+ G C L I S+ T L++K NND+SRDYT P+ P
Sbjct: 211 LDGQNIYN-GCCTLRIDNSKLTSLNVKYNNDKSRDYTNPTLP 251
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 58/106 (54%), Gaps = 11/106 (10%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F FG V KI TF K FQAL+Q+ D TA AK LDG++I G CTLR
Sbjct: 172 QIFQRFGKVLKIVTFTKNNSFQALIQYPDAATAQLAKQTLDGQNIYN-------GCCTLR 224
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID----ASGQLSVG 126
I S T L+VK+ + +SRDYTNP LP D A G +S G
Sbjct: 225 IDNSKLTSLNVKYNNDKSRDYTNPTLPSGEPGSDVIASAGGLVSAG 270
>gi|402588250|gb|EJW82183.1| hypothetical protein WUBG_06907, partial [Wuchereria bancrofti]
Length = 255
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 97/178 (54%), Gaps = 19/178 (10%)
Query: 112 VAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMF 171
++ SA+D S + +P S VL IENM Y VTLDVLH +FS +G V +I F
Sbjct: 19 ISASALDISA-------CTQQQPNS-VLRVIIENMLYPVTLDVLHQIFSRYGKVLRIITF 70
Query: 172 DKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY 231
+KN QAL+Q + +A +A+++L+G +Y+G C L I YS+ L++K NND+SRDY
Sbjct: 71 NKNNTFQALVQLSEANSAQLARQSLDGQNVYNGCCC-LRIDYSKLATLNVKYNNDKSRDY 129
Query: 232 TLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPP 289
T P+ P S L QQ + AT G Q P ++ P A +GA P
Sbjct: 130 TNPNLP---SGELTLEQQLSLVSAAT-----GGQMGPAIAS--LVQSPFAFPFGAANP 177
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 7/110 (6%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS +G V +I TF K FQALVQ S+ +A A+ +LDG+++ G C LR
Sbjct: 56 QIFSRYGKVLRIITFNKNNTFQALVQLSEANSAQLARQSLDGQNVYN-------GCCCLR 108
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP 134
I YS L+VK+ + +SRDYTNP LP ++ L G ++ P
Sbjct: 109 IDYSKLATLNVKYNNDKSRDYTNPNLPSGELTLEQQLSLVSAATGGQMGP 158
>gi|344293564|ref|XP_003418492.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Loxodonta
africana]
Length = 686
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 326 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 385
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 386 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 435
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 104/237 (43%), Gaps = 53/237 (22%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 348 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 400
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 122
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 401 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGA 460
Query: 123 LS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 164
LS VG+ G + +L++++ + VT L +F +G
Sbjct: 461 LSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGD 518
Query: 165 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
VQ++ + N ALIQ D + +A L G +Y + ++ S+H + +
Sbjct: 519 VQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMYGK---IIRVTLSKHQTVQL 571
>gi|281349698|gb|EFB25282.1| hypothetical protein PANDA_003123 [Ailuropoda melanoleuca]
Length = 501
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 141 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 200
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 201 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 250
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 103/232 (44%), Gaps = 53/232 (22%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 163 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 215
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 122
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 216 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGA 275
Query: 123 LS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 164
LS VG+ G + +L++++ + VT L +F +G
Sbjct: 276 LSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGD 333
Query: 165 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 216
VQ++ + N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 334 VQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 381
>gi|351704481|gb|EHB07400.1| Polypyrimidine tract-binding protein 2 [Heterocephalus glaber]
Length = 539
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 103/234 (44%), Gaps = 55/234 (23%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 122
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGA 311
Query: 123 LS--------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAF 162
LS VG+ G + +L++++ + VT L +F +
Sbjct: 312 LSPLAIPNAXXXXXXXXAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVY 369
Query: 163 GPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 216
G VQ++ + N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 370 GDVQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 419
>gi|297852124|ref|XP_002893943.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339785|gb|EFH70202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 432
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 110/212 (51%), Gaps = 38/212 (17%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+F FG + K+ A QAL+Q D +A SA N+ P T+R
Sbjct: 25 LFQPFGVITKLVMLR--AKNQALLQMQDVSSAISALQFF-----------TNVQP-TIR- 69
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
++ V+F SH+ + I+ + + G++ EP + +LL +I +
Sbjct: 70 ----GRNVYVQFSSHQE-----------LTTIEQN------IHGREDEP-NRILLVTIHH 107
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
M Y +T+DVLH VFS +G V+K+ F K+ G QALIQY Q A A+ AL+G IYDG
Sbjct: 108 MLYPITVDVLHQVFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIYDGC 167
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
C+L I +S +L + NNDRSRDYT P+ P
Sbjct: 168 -CQLDIQFSNLEELQVNYNNDRSRDYTNPNLP 198
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 111/219 (50%), Gaps = 39/219 (17%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFS +GFV K+ TF+K+AGFQAL+Q+ + A+SA+ AL GR+I G C L I
Sbjct: 120 VFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIYD-------GCCQLDI 172
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVA----------------------PSAIDAS--G 121
+S +L V + + RSRDYTNP LP SAI A+ G
Sbjct: 173 QFSNLEELQVNYNNDRSRDYTNPNLPAEQKGRSSHPGYGDVGVAYPQMANTSAIAAAFGG 232
Query: 122 QLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALI 181
L G+ G VL++++ ++ D L +FS +G + +I + +N AL+
Sbjct: 233 GLPPGITGTN--DRCTVLVSNLN--ADSIDEDKLFNLFSLYGNIVRIKLL-RNKPDHALV 287
Query: 182 QYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 220
Q D A +A L+G ++ +L +++S+H +++
Sbjct: 288 QMGDGFQAELAVHFLKGAVLFGK---RLEVNFSKHPNIT 323
>gi|332221975|ref|XP_003260140.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 4
[Nomascus leucogenys]
Length = 568
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 208 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 267
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 268 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 317
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 101/228 (44%), Gaps = 51/228 (22%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 230 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 282
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 122
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 283 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGA 342
Query: 123 LS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 164
LS VG+ G + +L++++ + VT L +F +G
Sbjct: 343 LSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGD 400
Query: 165 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 212
VQ++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 401 VQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 446
>gi|440902651|gb|ELR53420.1| Polypyrimidine tract-binding protein 2, partial [Bos grunniens
mutus]
Length = 524
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 164 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 223
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 224 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 273
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 103/232 (44%), Gaps = 53/232 (22%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 186 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 238
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 122
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 239 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGA 298
Query: 123 LS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 164
LS VG+ G + +L++++ + VT L +F +G
Sbjct: 299 LSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGD 356
Query: 165 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 216
VQ++ + N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 357 VQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 404
>gi|426216016|ref|XP_004002265.1| PREDICTED: polypyrimidine tract-binding protein 2 [Ovis aries]
Length = 510
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 150 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 209
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 210 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 259
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 101/228 (44%), Gaps = 51/228 (22%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 172 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 224
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 122
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 225 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGA 284
Query: 123 LS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 164
LS VG+ G + +L++++ + VT L +F +G
Sbjct: 285 LSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGD 342
Query: 165 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 212
VQ++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 343 VQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 388
>gi|431896401|gb|ELK05813.1| Polypyrimidine tract-binding protein 2 [Pteropus alecto]
Length = 485
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 125 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 184
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 185 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 234
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 103/232 (44%), Gaps = 53/232 (22%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 147 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 199
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 122
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 200 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGA 259
Query: 123 LS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 164
LS VG+ G + +L++++ + VT L +F +G
Sbjct: 260 LSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGD 317
Query: 165 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 216
VQ++ + N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 318 VQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 365
>gi|194389558|dbj|BAG61740.1| unnamed protein product [Homo sapiens]
Length = 548
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 188 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 247
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 248 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 297
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 101/228 (44%), Gaps = 51/228 (22%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 210 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 262
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 122
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 263 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGA 322
Query: 123 LS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 164
LS VG+ G + +L++++ + VT L +F +G
Sbjct: 323 LSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGD 380
Query: 165 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 212
VQ++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 381 VQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 426
>gi|402855348|ref|XP_003892288.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2 [Papio
anubis]
Length = 506
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 146 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 205
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 206 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 255
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 101/228 (44%), Gaps = 51/228 (22%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 168 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 220
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 122
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 221 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGA 280
Query: 123 LS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 164
LS VG+ G + +L++++ + VT L +F +G
Sbjct: 281 LSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGD 338
Query: 165 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 212
VQ++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 339 VQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 384
>gi|395821709|ref|XP_003784179.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1
[Otolemur garnettii]
Length = 540
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 88/167 (52%), Gaps = 14/167 (8%)
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP------ESNV 138
I YS H +L ++ + N A+ A S L G + +S V
Sbjct: 136 IQYSNHKEL-------KTDNTLNQRAQAVLQAVTAVQTASTPLSGTTVSESAVTPAQSPV 188
Query: 139 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 198
L I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK AL+G
Sbjct: 189 LRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDG 248
Query: 199 HCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 249 QNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 294
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 101/223 (45%), Gaps = 46/223 (20%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 207 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 259
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 124
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 260 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 319
Query: 125 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 169
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 320 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 377
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 212
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 378 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 418
>gi|354504008|ref|XP_003514071.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Cricetulus
griseus]
Length = 501
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 146 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 205
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 206 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 255
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 168 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 220
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 124
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 221 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 280
Query: 125 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 169
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 281 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 338
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 216
+ N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 339 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 381
>gi|426330458|ref|XP_004026228.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 3
[Gorilla gorilla gorilla]
Length = 548
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 188 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 247
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 248 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 297
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 101/228 (44%), Gaps = 51/228 (22%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 210 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 262
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 122
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 263 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGA 322
Query: 123 LS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 164
LS VG+ G + +L++++ + VT L +F +G
Sbjct: 323 LSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGD 380
Query: 165 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 212
VQ++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 381 VQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 426
>gi|13879326|gb|AAH06638.1| ROD1 regulator of differentiation 1 (S. pombe) [Mus musculus]
Length = 520
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 112/219 (51%), Gaps = 36/219 (16%)
Query: 120 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 175
SG LS+ +G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN
Sbjct: 127 SGNLSLPGATANEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNN 186
Query: 176 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 187 QFQALLQYADPVNAQYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLD 245
Query: 236 TPMVNSQPSILGQQPVPMV------GATANQYNGAQ-FAPPPPEQPMMHQPTAAGWG--A 286
P + QPS+ +P PM G ++ Y GA FAP + P AAG A
Sbjct: 246 LPTGDGQPSL---EP-PMAAAFGAPGIMSSPYAGAAGFAPA------IAFPQAAGLSVPA 295
Query: 287 VPPASQSMPMMGNHPYMPPGSMPMGPGMMQMHMPGQSGM 325
VP A + P ++ +M +PG SGM
Sbjct: 296 VPGA------------LGPLTLTSSAVSGRMAIPGASGM 322
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 101/234 (43%), Gaps = 68/234 (29%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 168 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYN-------ACCTLR 220
Query: 85 ITYSAHTDLSVKFQSHRSRDYT----------------------------NPY------- 109
I +S T L+VK+ + +SRD+T +PY
Sbjct: 221 IDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAAAFGAPGIMSSPYAGAAGFA 280
Query: 110 ------------LPVAPSAID--------ASGQLSVGLDGKKLEPESNVLLASIENMQYA 149
+P P A+ SG++++ G P ++VLL + N +
Sbjct: 281 PAIAFPQAAGLSVPAVPGALGPLTLTSSAVSGRMAI--PGASGMPGNSVLLVTNLNPDF- 337
Query: 150 VTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 202
+T L ++F +G V ++ MF+K AL+Q D A +A L G +Y
Sbjct: 338 ITPHGLFILFGVYGDVHRVKIMFNKKE--NALVQMADASQAQLAMNHLSGQRLY 389
>gi|332809593|ref|XP_003308280.1| PREDICTED: polypyrimidine tract-binding protein 2 [Pan troglodytes]
gi|397474051|ref|XP_003808504.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 3 [Pan
paniscus]
Length = 548
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 188 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 247
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 248 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 297
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 101/228 (44%), Gaps = 51/228 (22%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 210 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 262
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 122
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 263 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGA 322
Query: 123 LS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 164
LS VG+ G + +L++++ + VT L +F +G
Sbjct: 323 LSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGD 380
Query: 165 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 212
VQ++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 381 VQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 426
>gi|73959499|ref|XP_866820.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 4 [Canis
lupus familiaris]
gi|119593416|gb|EAW73010.1| polypyrimidine tract binding protein 2, isoform CRA_f [Homo
sapiens]
Length = 480
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 125 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 184
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 185 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 234
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 147 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 199
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 124
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 200 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 259
Query: 125 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 169
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 260 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 317
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 216
+ N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 318 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 360
>gi|334324359|ref|XP_001381834.2| PREDICTED: polypyrimidine tract-binding protein 2-like [Monodelphis
domestica]
Length = 640
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 280 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 339
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 340 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 389
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 102/232 (43%), Gaps = 53/232 (22%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 302 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 354
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 122
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 355 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGA 414
Query: 123 LS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 164
LS VG+ G + +L++++ + VT L +F +G
Sbjct: 415 LSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGD 472
Query: 165 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 216
VQ++ + N ALIQ D + +A L G +Y + ++ S+H
Sbjct: 473 VQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMYGK---IIRVTLSKH 520
>gi|297279324|ref|XP_001105316.2| PREDICTED: polypyrimidine tract-binding protein 2-like isoform 6
[Macaca mulatta]
gi|22218306|gb|AAM94625.1| non-neuronal splice variant nPTB4 [Homo sapiens]
gi|119593412|gb|EAW73006.1| polypyrimidine tract binding protein 2, isoform CRA_b [Homo
sapiens]
Length = 536
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 103/232 (44%), Gaps = 53/232 (22%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 122
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGA 311
Query: 123 LS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 164
LS VG+ G + +L++++ + VT L +F +G
Sbjct: 312 LSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGD 369
Query: 165 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 216
VQ++ + N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 370 VQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 417
>gi|345801647|ref|XP_003434832.1| PREDICTED: polypyrimidine tract-binding protein 2 [Canis lupus
familiaris]
Length = 540
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 185 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 244
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 245 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 294
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 101/223 (45%), Gaps = 46/223 (20%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 207 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 259
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 124
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 260 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 319
Query: 125 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 169
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 320 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 377
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 212
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 378 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 418
>gi|194389592|dbj|BAG61757.1| unnamed protein product [Homo sapiens]
Length = 540
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 185 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 244
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 245 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 294
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 101/223 (45%), Gaps = 46/223 (20%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 207 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 259
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 124
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 260 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 319
Query: 125 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 169
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 320 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 377
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 212
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 378 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 418
>gi|301758643|ref|XP_002915171.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Ailuropoda
melanoleuca]
gi|395730215|ref|XP_002810624.2| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Pongo
abelii]
gi|22218304|gb|AAM94624.1| non-neuronal splice variant nPTB3 [Homo sapiens]
gi|119593414|gb|EAW73008.1| polypyrimidine tract binding protein 2, isoform CRA_d [Homo
sapiens]
Length = 537
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 103/232 (44%), Gaps = 53/232 (22%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 122
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGA 311
Query: 123 LS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 164
LS VG+ G + +L++++ + VT L +F +G
Sbjct: 312 LSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGD 369
Query: 165 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 216
VQ++ + N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 370 VQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 417
>gi|297279326|ref|XP_001105013.2| PREDICTED: polypyrimidine tract-binding protein 2-like isoform 2
[Macaca mulatta]
gi|332809591|ref|XP_001158089.2| PREDICTED: polypyrimidine tract-binding protein 2 isoform 7 [Pan
troglodytes]
gi|395730217|ref|XP_003775687.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2 [Pongo
abelii]
gi|397474049|ref|XP_003808503.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2 [Pan
paniscus]
gi|426330456|ref|XP_004026227.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2
[Gorilla gorilla gorilla]
Length = 540
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 185 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 244
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 245 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 294
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 101/223 (45%), Gaps = 46/223 (20%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 207 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 259
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 124
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 260 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 319
Query: 125 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 169
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 320 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 377
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 212
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 378 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 418
>gi|30039680|ref|NP_835458.1| polypyrimidine tract-binding protein 3 isoform 2 [Mus musculus]
gi|50401558|sp|Q8BHD7.1|PTBP3_MOUSE RecName: Full=Polypyrimidine tract-binding protein 3; AltName:
Full=Regulator of differentiation 1; Short=Rod1
gi|26329429|dbj|BAC28453.1| unnamed protein product [Mus musculus]
gi|26353590|dbj|BAC40425.1| unnamed protein product [Mus musculus]
gi|34785867|gb|AAH57641.1| ROD1 regulator of differentiation 1 (S. pombe) [Mus musculus]
Length = 523
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 112/219 (51%), Gaps = 36/219 (16%)
Query: 120 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 175
SG LS+ +G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN
Sbjct: 130 SGNLSLPGATANEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNN 189
Query: 176 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 190 QFQALLQYADPVNAQYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLD 248
Query: 236 TPMVNSQPSILGQQPVPMV------GATANQYNGAQ-FAPPPPEQPMMHQPTAAGWG--A 286
P + QPS+ +P PM G ++ Y GA FAP + P AAG A
Sbjct: 249 LPTGDGQPSL---EP-PMAAAFGAPGIMSSPYAGAAGFAPA------IAFPQAAGLSVPA 298
Query: 287 VPPASQSMPMMGNHPYMPPGSMPMGPGMMQMHMPGQSGM 325
VP A + P ++ +M +PG SGM
Sbjct: 299 VPGA------------LGPLTLTSSAVSGRMAIPGASGM 325
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 101/234 (43%), Gaps = 68/234 (29%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 171 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYN-------ACCTLR 223
Query: 85 ITYSAHTDLSVKFQSHRSRDYT----------------------------NPY------- 109
I +S T L+VK+ + +SRD+T +PY
Sbjct: 224 IDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAAAFGAPGIMSSPYAGAAGFA 283
Query: 110 ------------LPVAPSAID--------ASGQLSVGLDGKKLEPESNVLLASIENMQYA 149
+P P A+ SG++++ G P ++VLL + N +
Sbjct: 284 PAIAFPQAAGLSVPAVPGALGPLTLTSSAVSGRMAI--PGASGMPGNSVLLVTNLNPDF- 340
Query: 150 VTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 202
+T L ++F +G V ++ MF+K AL+Q D A +A L G +Y
Sbjct: 341 ITPHGLFILFGVYGDVHRVKIMFNKKE--NALVQMADASQAQLAMNHLSGQRLY 392
>gi|355558193|gb|EHH14973.1| hypothetical protein EGK_00996, partial [Macaca mulatta]
Length = 529
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 174 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 233
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 234 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 283
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 196 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 248
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 124
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 249 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 308
Query: 125 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 169
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 309 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 366
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 216
+ N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 367 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 409
>gi|327270713|ref|XP_003220133.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Anolis
carolinensis]
Length = 531
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 100/223 (44%), Gaps = 46/223 (20%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 124
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLG 311
Query: 125 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 169
VG+ G + VLL S N + VT L +F +G VQ++
Sbjct: 312 IPNAAAAAAAAAAGRVGMPGVS-SGGNTVLLVSNLN-EEMVTPQSLFTLFGVYGDVQRVK 369
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 212
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 370 IL-YNKKDSALIQMADGNQSQLAMSHLNGQKMY-GKIIRVTLS 410
>gi|326925087|ref|XP_003208753.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Meleagris
gallopavo]
Length = 531
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 101/223 (45%), Gaps = 46/223 (20%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 124
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 311
Query: 125 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 169
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 312 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 369
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 212
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 370 IL-YNKKDSALIQMADGNQSQLAMSHLNGQKMY-GKIIRVTLS 410
>gi|291398459|ref|XP_002715890.1| PREDICTED: polypyrimidine tract binding protein 2 [Oryctolagus
cuniculus]
Length = 536
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 103/232 (44%), Gaps = 53/232 (22%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS----------------GQ 122
I +S +L+VK+ + +SRDYT P LP AI A+ G
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGA 311
Query: 123 LS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 164
LS VG+ G + +L++++ + VT L +F +G
Sbjct: 312 LSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGD 369
Query: 165 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 216
VQ++ + N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 370 VQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 417
>gi|148670262|gb|EDL02209.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b [Mus
musculus]
Length = 590
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 100/209 (47%), Gaps = 38/209 (18%)
Query: 120 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 175
SG LS+ +G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN
Sbjct: 197 SGNLSLPGATANEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNN 256
Query: 176 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 257 QFQALLQYADPVNAQYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLD 315
Query: 236 TPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMP 295
P + QPS+ E PM AA +GA P S P
Sbjct: 316 LPTGDGQPSL--------------------------EPPM-----AAAFGA--PGIMSSP 342
Query: 296 MMGNHPYMPPGSMPMGPGMMQMHMPGQSG 324
G + P + P G+ +PG G
Sbjct: 343 YAGAAGFAPAIAFPQAAGLSVPAVPGALG 371
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 101/234 (43%), Gaps = 68/234 (29%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 238 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYNAC-------CTLR 290
Query: 85 ITYSAHTDLSVKFQSHRSRDYT----------------------------NPY------- 109
I +S T L+VK+ + +SRD+T +PY
Sbjct: 291 IDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAAAFGAPGIMSSPYAGAAGFA 350
Query: 110 ------------LPVAPSAID--------ASGQLSVGLDGKKLEPESNVLLASIENMQYA 149
+P P A+ SG++++ G P ++VLL + N +
Sbjct: 351 PAIAFPQAAGLSVPAVPGALGPLTLTSSAVSGRMAI--PGASGMPGNSVLLVTNLNPDF- 407
Query: 150 VTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 202
+T L ++F +G V ++ MF+K AL+Q D A +A L G +Y
Sbjct: 408 ITPHGLFILFGVYGDVHRVKIMFNKKE--NALVQMADASQAQLAMNHLSGQRLY 459
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 78/193 (40%), Gaps = 20/193 (10%)
Query: 26 VFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G VH++ F K ALVQ +D A A N L G+ + +L R
Sbjct: 416 LFGVYGDVHRVKIMFNKKE--NALVQMADASQAQLAMNHLSGQRLYGKVL---------R 464
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIE 144
T S H + + + + T + G + + + P S L +
Sbjct: 465 ATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL--HLS 518
Query: 145 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 204
N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H + G
Sbjct: 519 NIPPSVTMDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDL--G 576
Query: 205 GFCKLHISYSRHT 217
L +S+S+ T
Sbjct: 577 ENHHLRVSFSKST 589
>gi|395821711|ref|XP_003784180.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2
[Otolemur garnettii]
Length = 531
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 88/167 (52%), Gaps = 14/167 (8%)
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP------ESNV 138
I YS H +L ++ + N A+ A S L G + +S V
Sbjct: 128 IQYSNHKEL-------KTDNTLNQRAQAVLQAVTAVQTASTPLSGTTVSESAVTPAQSPV 180
Query: 139 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 198
L I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK AL+G
Sbjct: 181 LRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDG 240
Query: 199 HCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 241 QNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 124
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 311
Query: 125 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 169
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 312 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 369
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 216
+ N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 370 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 412
>gi|16580749|dbj|BAB71742.1| PTB-like protein L [Homo sapiens]
gi|16741546|gb|AAH16582.1| Polypyrimidine tract binding protein 2 [Homo sapiens]
gi|119593413|gb|EAW73007.1| polypyrimidine tract binding protein 2, isoform CRA_c [Homo
sapiens]
gi|123980248|gb|ABM81953.1| polypyrimidine tract binding protein 2 [synthetic construct]
gi|157928112|gb|ABW03352.1| polypyrimidine tract binding protein 2 [synthetic construct]
gi|410216174|gb|JAA05306.1| polypyrimidine tract binding protein 2 [Pan troglodytes]
gi|410328831|gb|JAA33362.1| polypyrimidine tract binding protein 2 [Pan troglodytes]
Length = 532
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 124
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 311
Query: 125 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 169
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 312 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 369
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 216
+ N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 370 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 412
>gi|255003709|ref|NP_659153.2| polypyrimidine tract-binding protein 3 isoform 1 [Mus musculus]
Length = 551
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 112/219 (51%), Gaps = 36/219 (16%)
Query: 120 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 175
SG LS+ +G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN
Sbjct: 158 SGNLSLPGATANEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNN 217
Query: 176 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 218 QFQALLQYADPVNAQYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLD 276
Query: 236 TPMVNSQPSILGQQPVPMV------GATANQYNGAQ-FAPPPPEQPMMHQPTAAGWG--A 286
P + QPS+ +P PM G ++ Y GA FAP + P AAG A
Sbjct: 277 LPTGDGQPSL---EP-PMAAAFGAPGIMSSPYAGAAGFAPA------IAFPQAAGLSVPA 326
Query: 287 VPPASQSMPMMGNHPYMPPGSMPMGPGMMQMHMPGQSGM 325
VP A + P ++ +M +PG SGM
Sbjct: 327 VPGA------------LGPLTLTSSAVSGRMAIPGASGM 353
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 101/234 (43%), Gaps = 68/234 (29%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYN-------ACCTLR 251
Query: 85 ITYSAHTDLSVKFQSHRSRDYT----------------------------NPY------- 109
I +S T L+VK+ + +SRD+T +PY
Sbjct: 252 IDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAAAFGAPGIMSSPYAGAAGFA 311
Query: 110 ------------LPVAPSAID--------ASGQLSVGLDGKKLEPESNVLLASIENMQYA 149
+P P A+ SG++++ G P ++VLL + N +
Sbjct: 312 PAIAFPQAAGLSVPAVPGALGPLTLTSSAVSGRMAI--PGASGMPGNSVLLVTNLNPDF- 368
Query: 150 VTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 202
+T L ++F +G V ++ MF+K AL+Q D A +A L G +Y
Sbjct: 369 ITPHGLFILFGVYGDVHRVKIMFNKKE--NALVQMADASQAQLAMNHLSGQRLY 420
>gi|115464105|ref|NP_001055652.1| Os05g0437300 [Oryza sativa Japonica Group]
gi|113579203|dbj|BAF17566.1| Os05g0437300 [Oryza sativa Japonica Group]
gi|215734982|dbj|BAG95704.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196864|gb|EEC79291.1| hypothetical protein OsI_20097 [Oryza sativa Indica Group]
gi|222631716|gb|EEE63848.1| hypothetical protein OsJ_18672 [Oryza sativa Japonica Group]
Length = 444
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 79/131 (60%), Gaps = 1/131 (0%)
Query: 107 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
N Y+ + + Q S G + + + +LL +I +M Y +T++VLH VF A+G V+
Sbjct: 72 NVYMQFSSHQELTTDQNSHGRNSDQESEPNRILLVTIHHMMYPITVEVLHQVFKAYGYVE 131
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
KI F K+ G QALIQY +Q A+ A AL G IYDG C+L I YS ++L + NND
Sbjct: 132 KIVTFQKSAGFQALIQYQSLQEAMDAFGALHGRNIYDGC-CQLDIQYSNLSELQVHYNND 190
Query: 227 RSRDYTLPSTP 237
RSRD+T PS P
Sbjct: 191 RSRDFTNPSLP 201
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 114/249 (45%), Gaps = 51/249 (20%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VF A+G+V KI TF+K+AGFQAL+Q+ + A A AL GR+I G C L I
Sbjct: 123 VFKAYGYVEKIVTFQKSAGFQALIQYQSLQEAMDAFGALHGRNIYD-------GCCQLDI 175
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVA-------------------------------P 114
YS ++L V + + RSRD+TNP LP
Sbjct: 176 QYSNLSELQVHYNNDRSRDFTNPSLPTEQRPRASQQGYPDPGGLYAFQQPGASYAQMGRA 235
Query: 115 SAIDAS--GQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD 172
+ I A+ G L G+ G E L+ S N + D L +FS +G + +I +
Sbjct: 236 AMITAAFGGTLPPGVTGTN---ERCTLIVSNLNTD-KINEDKLFNLFSLYGNIVRIKIL- 290
Query: 173 KNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 232
+N AL++ D A +A L+G ++ KL ++YS++ +++ + + DYT
Sbjct: 291 RNKPDHALVEMADGFQAELAVHYLKGAVLFAK---KLEVNYSKYPNITSAPD---AHDYT 344
Query: 233 LPSTPMVNS 241
S NS
Sbjct: 345 TSSLNRFNS 353
>gi|355745467|gb|EHH50092.1| hypothetical protein EGM_00861, partial [Macaca fascicularis]
Length = 529
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 174 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 233
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 234 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 283
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 196 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 248
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 124
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 249 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 308
Query: 125 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 169
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 309 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 366
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 216
+ N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 367 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 409
>gi|338725424|ref|XP_001490156.3| PREDICTED: polypyrimidine tract-binding protein 2 [Equus caballus]
gi|402855346|ref|XP_003892287.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Papio
anubis]
gi|194379976|dbj|BAG58340.1| unnamed protein product [Homo sapiens]
Length = 325
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 146 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 205
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 206 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 255
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 168 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 220
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S +L+VK+ + +SRDYT P LP
Sbjct: 221 IDFSKLVNLNVKYNNDKSRDYTRPDLP 247
>gi|10863997|ref|NP_067013.1| polypyrimidine tract-binding protein 2 [Homo sapiens]
gi|332221969|ref|XP_003260137.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1
[Nomascus leucogenys]
gi|332809589|ref|XP_001157727.2| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Pan
troglodytes]
gi|345801645|ref|XP_547270.3| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Canis
lupus familiaris]
gi|397474047|ref|XP_003808502.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Pan
paniscus]
gi|426330454|ref|XP_004026226.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1
[Gorilla gorilla gorilla]
gi|74761983|sp|Q9UKA9.1|PTBP2_HUMAN RecName: Full=Polypyrimidine tract-binding protein 2; AltName:
Full=Neural polypyrimidine tract-binding protein;
AltName: Full=Neurally-enriched homolog of PTB; AltName:
Full=PTB-like protein
gi|6492336|gb|AAF14284.1|AF176085_1 neural polypyrimidine tract binding protein [Homo sapiens]
gi|22711855|tpg|DAA00060.1| TPA_exp: splicing regulator nPTB1 [Homo sapiens]
gi|119593411|gb|EAW73005.1| polypyrimidine tract binding protein 2, isoform CRA_a [Homo
sapiens]
gi|380815182|gb|AFE79465.1| polypyrimidine tract-binding protein 2 [Macaca mulatta]
gi|384948520|gb|AFI37865.1| polypyrimidine tract-binding protein 2 [Macaca mulatta]
gi|410298260|gb|JAA27730.1| polypyrimidine tract binding protein 2 [Pan troglodytes]
Length = 531
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 124
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 311
Query: 125 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 169
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 312 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 369
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 216
+ N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 370 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIR--VTLSKH 412
>gi|118094291|ref|XP_422322.2| PREDICTED: polypyrimidine tract-binding protein 2 [Gallus gallus]
Length = 531
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 101/223 (45%), Gaps = 46/223 (20%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 124
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 311
Query: 125 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 169
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 312 IPNAAAAAAAAAAGRVGMPGVSASGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 369
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 212
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 370 IL-YNKKDSALIQMADGNQSQLAMSHLNGQKMY-GKIIRVTLS 410
>gi|148670263|gb|EDL02210.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_c [Mus
musculus]
Length = 556
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 112/219 (51%), Gaps = 36/219 (16%)
Query: 120 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 175
SG LS+ +G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN
Sbjct: 163 SGNLSLPGATANEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNN 222
Query: 176 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 223 QFQALLQYADPVNAQYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLD 281
Query: 236 TPMVNSQPSILGQQPVPMV------GATANQYNGAQ-FAPPPPEQPMMHQPTAAGWG--A 286
P + QPS+ +P PM G ++ Y GA FAP + P AAG A
Sbjct: 282 LPTGDGQPSL---EP-PMAAAFGAPGIMSSPYAGAAGFAPA------IAFPQAAGLSVPA 331
Query: 287 VPPASQSMPMMGNHPYMPPGSMPMGPGMMQMHMPGQSGM 325
VP A + P ++ +M +PG SGM
Sbjct: 332 VPGA------------LGPLTLTSSAVSGRMAIPGASGM 358
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 101/234 (43%), Gaps = 68/234 (29%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 204 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYN-------ACCTLR 256
Query: 85 ITYSAHTDLSVKFQSHRSRDYT----------------------------NPY------- 109
I +S T L+VK+ + +SRD+T +PY
Sbjct: 257 IDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAAAFGAPGIMSSPYAGAAGFA 316
Query: 110 ------------LPVAPSAID--------ASGQLSVGLDGKKLEPESNVLLASIENMQYA 149
+P P A+ SG++++ G P ++VLL + N +
Sbjct: 317 PAIAFPQAAGLSVPAVPGALGPLTLTSSAVSGRMAI--PGASGMPGNSVLLVTNLNPDF- 373
Query: 150 VTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 202
+T L ++F +G V ++ MF+K AL+Q D A +A L G +Y
Sbjct: 374 ITPHGLFILFGVYGDVHRVKIMFNKKE--NALVQMADASQAQLAMNHLSGQRLY 425
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 78/193 (40%), Gaps = 20/193 (10%)
Query: 26 VFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G VH++ F K ALVQ +D A A N L G+ + +L R
Sbjct: 382 LFGVYGDVHRVKIMFNKKE--NALVQMADASQAQLAMNHLSGQRLYGKVL---------R 430
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIE 144
T S H + + + + T + G + + + P S L +
Sbjct: 431 ATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL--HLS 484
Query: 145 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 204
N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H + G
Sbjct: 485 NIPPSVTMDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDL--G 542
Query: 205 GFCKLHISYSRHT 217
L +S+S+ T
Sbjct: 543 ENHHLRVSFSKST 555
>gi|395535423|ref|XP_003769725.1| PREDICTED: polypyrimidine tract-binding protein 2 [Sarcophilus
harrisii]
Length = 494
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 139 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 198
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 199 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 248
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 101/223 (45%), Gaps = 46/223 (20%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 161 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 213
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 124
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 214 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 273
Query: 125 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 169
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 274 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 331
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 212
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 332 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 372
>gi|357497747|ref|XP_003619162.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355494177|gb|AES75380.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 354
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 107/213 (50%), Gaps = 39/213 (18%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F FG V K+ A QALVQ D +A SA I Y+ N P
Sbjct: 24 QLFQPFGVVTKLVMLR--AKNQALVQMQDVASADSA--------IQFYI---NSQPSI-- 68
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIE 144
++ V+F SHR + +D + G++ EP + +LL ++
Sbjct: 69 ----RGRNVYVQFSSHRE-----------LTTMDQN-------QGREDEP-NRILLVTVH 105
Query: 145 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 204
+ Y +T+DVL VFS G V+KI F K+ G QALIQY Q+AV A+ AL+G +YD
Sbjct: 106 QVLYPMTVDVLQQVFSPHGFVEKIVTFQKSAGFQALIQYETRQSAVTARGALQGRNVYD- 164
Query: 205 GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
G C+L I +S +L + NNDRSRD+T P+ P
Sbjct: 165 GCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLP 197
>gi|403283993|ref|XP_003933374.1| PREDICTED: polypyrimidine tract-binding protein 2 [Saimiri
boliviensis boliviensis]
Length = 577
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 222 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 281
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 282 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 331
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 101/223 (45%), Gaps = 46/223 (20%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 244 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 296
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 124
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 297 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 356
Query: 125 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 169
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 357 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 414
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 212
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 415 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 455
>gi|355717047|gb|AES05805.1| ROD1 regulator of differentiation 1 [Mustela putorius furo]
Length = 497
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 93/170 (54%), Gaps = 16/170 (9%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 117 EGTILPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 176
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 247
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 177 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL-- 233
Query: 248 QQPVPMV------GATANQYNGAQ-FAPPPPEQPMMHQPTAAGWGAVPPA 290
+P PM G ++ Y GA FAP HQ T AVP A
Sbjct: 234 -EP-PMAAAFGAPGIISSPYAGAAGFAPAIG----FHQATGLSVPAVPGA 277
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 146 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 198
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRD+T LP
Sbjct: 199 IDFSKLTSLNVKYNNDKSRDFTRLDLP 225
>gi|218189437|gb|EEC71864.1| hypothetical protein OsI_04570 [Oryza sativa Indica Group]
Length = 443
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 113/230 (49%), Gaps = 40/230 (17%)
Query: 19 ASGERAHVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENM 78
+ E V FG V K+ A QALVQ D +SA N + + + P
Sbjct: 18 SESELLQVVQPFGTVAKLVMLR--AKNQALVQMEDL---ASAVNVIQYYNT---IQPSVR 69
Query: 79 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNV 138
G + + YS+H +L+ SH G + + EP + +
Sbjct: 70 GR-NVYLQYSSHQELTTDQSSH-------------------------GRNPDQEEP-NRI 102
Query: 139 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 198
LL +I +M Y +T++VLH VFS +G V+KI F K+ G Q LIQY Q+A+ A AL G
Sbjct: 103 LLVTIHHMLYPITIEVLHQVFSPYGFVEKIVTFQKSAGFQTLIQYQSRQSAIQAYGALHG 162
Query: 199 HCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMV----NSQPS 244
IYDG C+L I YS ++L + NNDRSRD+T PS P +SQPS
Sbjct: 163 RNIYDGC-CQLDIQYSNLSELQVHYNNDRSRDFTNPSLPTEQRSRSSQPS 211
>gi|345306392|ref|XP_001508115.2| PREDICTED: polypyrimidine tract-binding protein 2-like
[Ornithorhynchus anatinus]
Length = 606
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 251 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 310
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 311 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 360
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 101/223 (45%), Gaps = 46/223 (20%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 273 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 325
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 124
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 326 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 385
Query: 125 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 169
VGL G + +L++++ + VT L +F +G VQ++
Sbjct: 386 IPNAAAAAAAAAAGRVGLPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 443
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 212
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 444 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 484
>gi|224066621|ref|XP_002302167.1| predicted protein [Populus trichocarpa]
gi|222843893|gb|EEE81440.1| predicted protein [Populus trichocarpa]
Length = 436
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 113/219 (51%), Gaps = 38/219 (17%)
Query: 19 ASGERAHVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENM 78
+ + +F FG + K+ A QAL+Q D SA NAL L N+
Sbjct: 18 SENDLLQLFQPFGVITKLVMLR--AKNQALLQMQD---VPSAINALQ--------LYTNI 64
Query: 79 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNV 138
P T+R ++ V+F SH+ + +D + Q G+ EP + +
Sbjct: 65 QP-TIR-----GRNVYVQFSSHQE-----------LTTMDQNTQ------GRGDEP-NRI 100
Query: 139 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 198
LL +I +M Y +T++VLH VFS G V+KI F K+ G QALIQY Q AV A+ +L+G
Sbjct: 101 LLVTIHHMLYPITVEVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQCAVQARTSLQG 160
Query: 199 HCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
IYDG C+L I +S +L + NNDRSRD+T P+ P
Sbjct: 161 RNIYDGC-CQLDIQFSNLDELQVNYNNDRSRDFTNPNLP 198
>gi|345777899|ref|XP_538790.3| PREDICTED: regulator of differentiation 1 [Canis lupus familiaris]
Length = 610
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 93/170 (54%), Gaps = 16/170 (9%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 229 EGTILPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 288
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 247
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 289 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL-- 345
Query: 248 QQPVPMV------GATANQYNGAQ-FAPPPPEQPMMHQPTAAGWGAVPPA 290
+P PM G ++ Y GA FAP HQ T AVP A
Sbjct: 346 -EP-PMAAAFGAPGIISSPYAGAAGFAPAIG----FHQATGISVPAVPGA 389
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 258 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 310
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRD+T LP
Sbjct: 311 IDFSKLTSLNVKYNNDKSRDFTRLDLP 337
>gi|356559629|ref|XP_003548101.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Glycine max]
Length = 439
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 79/134 (58%), Gaps = 7/134 (5%)
Query: 133 EPESN-VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
E E N +LL ++ +M Y +T DVLH VFS G V+KI F K+ G QALIQY Q+AV
Sbjct: 93 EDEPNRILLVTVHHMLYPITADVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVT 152
Query: 192 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPV 251
A+ L+G IYDG C+L I +S +L + NNDRSRD+T P+ P G+
Sbjct: 153 ARSTLQGRNIYDGC-CQLDIQFSNLDELQVNYNNDRSRDFTNPNLPTEQK-----GRSSQ 206
Query: 252 PMVGATANQYNGAQ 265
P G A Y+GA+
Sbjct: 207 PGYGDAAGMYSGAR 220
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 107/225 (47%), Gaps = 43/225 (19%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFS GFV KI TF+K+AGFQAL+Q+ ++A +A++ L GR+I G C L I
Sbjct: 119 VFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVTARSTLQGRNIYD-------GCCQLDI 171
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVA-------PSAIDASGQLSVGLDG--------- 129
+S +L V + + RSRD+TNP LP P DA+G S G
Sbjct: 172 QFSNLDELQVNYNNDRSRDFTNPNLPTEQKGRSSQPGYGDAAGMYSGARAGGFSQMANAA 231
Query: 130 --------------KKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 175
VL+A++ + + D L +FS +G + +I + +N
Sbjct: 232 AIAAAFGGGLPPGITGTNERCTVLVANLNPDR--IDEDKLFNLFSIYGNIVRIKLL-RNK 288
Query: 176 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 220
ALIQ D A +A L+G ++ +L ++YS+H +++
Sbjct: 289 PDHALIQMGDGFQAELAVHFLKGAMLFGK---RLEVNYSKHANIT 330
>gi|16580751|dbj|BAB71743.1| PTB-like protein S [Homo sapiens]
gi|119593415|gb|EAW73009.1| polypyrimidine tract binding protein 2, isoform CRA_e [Homo
sapiens]
Length = 356
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S +L+VK+ + +SRDYT P LP
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLP 278
>gi|281345981|gb|EFB21565.1| hypothetical protein PANDA_015565 [Ailuropoda melanoleuca]
Length = 444
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 93/170 (54%), Gaps = 16/170 (9%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 132 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGAVLKIITFTKNNQFQALLQYADPV 191
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 247
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 192 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL-- 248
Query: 248 QQPVPMV------GATANQYNGAQ-FAPPPPEQPMMHQPTAAGWGAVPPA 290
+P PM G ++ Y GA FAP HQ T AVP A
Sbjct: 249 -EP-PMAAAFGAPGIISSPYAGAAGFAP----AIGFHQATGLSVPAVPGA 292
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 161 QIFSKFGAVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYNAC-------CTLR 213
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 113
I +S T L+VK+ + +SRD+T LP
Sbjct: 214 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 242
>gi|148670261|gb|EDL02208.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_a [Mus
musculus]
Length = 528
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 112/219 (51%), Gaps = 36/219 (16%)
Query: 120 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 175
SG LS+ +G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN
Sbjct: 161 SGNLSLPGATANEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNN 220
Query: 176 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 221 QFQALLQYADPVNAQYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLD 279
Query: 236 TPMVNSQPSILGQQPVPMV------GATANQYNGAQ-FAPPPPEQPMMHQPTAAGWG--A 286
P + QPS+ +P PM G ++ Y GA FAP + P AAG A
Sbjct: 280 LPTGDGQPSL---EP-PMAAAFGAPGIMSSPYAGAAGFAPA------IAFPQAAGLSVPA 329
Query: 287 VPPASQSMPMMGNHPYMPPGSMPMGPGMMQMHMPGQSGM 325
VP A + P ++ +M +PG SGM
Sbjct: 330 VPGA------------LGPLTLTSSAVSGRMAIPGASGM 356
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 101/234 (43%), Gaps = 68/234 (29%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 202 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYN-------ACCTLR 254
Query: 85 ITYSAHTDLSVKFQSHRSRDYT----------------------------NPY------- 109
I +S T L+VK+ + +SRD+T +PY
Sbjct: 255 IDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAAAFGAPGIMSSPYAGAAGFA 314
Query: 110 ------------LPVAPSAID--------ASGQLSVGLDGKKLEPESNVLLASIENMQYA 149
+P P A+ SG++++ G P ++VLL + N +
Sbjct: 315 PAIAFPQAAGLSVPAVPGALGPLTLTSSAVSGRMAI--PGASGMPGNSVLLVTNLNPDF- 371
Query: 150 VTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 202
+T L ++F +G V ++ MF+K AL+Q D A +A L G +Y
Sbjct: 372 ITPHGLFILFGVYGDVHRVKIMFNKKE--NALVQMADASQAQLAMNHLSGQRLY 423
>gi|297270365|ref|XP_001099980.2| PREDICTED: regulator of differentiation 1-like [Macaca mulatta]
Length = 860
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 479 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 538
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 539 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 595
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 109/268 (40%), Gaps = 65/268 (24%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 508 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYNAC-------CTLR 560
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA------------------------------- 113
I +S T L+VK+ + +SRD+T LP
Sbjct: 561 IDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAAAFGAPGIISSPYAGAAGFA 620
Query: 114 -------------PSAIDASGQLSV---------GLDGKKLEPESNVLLASIENMQYAVT 151
P+ A G L++ + G P ++VLL + N +T
Sbjct: 621 PAIGFPQATGLSVPAVPGALGPLTITSSAVTGRMAIPGASGIPGNSVLLVTNLNPDL-IT 679
Query: 152 LDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 210
L ++F +G V ++ MF+K AL+Q D A +A L G +Y G +
Sbjct: 680 PHGLFILFGVYGDVHRVKIMFNKKE--NALVQMADANQAQLAMNHLSGQRLY-GKVLRAT 736
Query: 211 ISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
+S + L + D+ ++P+
Sbjct: 737 LSKHQAVQLPREGQEDQGLTKDFSNSPL 764
>gi|118404352|ref|NP_001072479.1| polypyrimidine tract binding protein 2 [Xenopus (Silurana)
tropicalis]
gi|112418598|gb|AAI21904.1| polypyrimidine tract binding protein 2 [Xenopus (Silurana)
tropicalis]
Length = 531
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 103/227 (45%), Gaps = 48/227 (21%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 199 QIFSKFGTVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 251
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 124
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 252 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLG 311
Query: 125 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 169
VG+ G + +L++++ + V+ L +F +G VQ++
Sbjct: 312 IPNAAAAAAAAAASRVGMHGVSTGGNTVLLVSNLN--EEMVSPQSLFTLFGVYGDVQRVK 369
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 216
+ N ALIQ D + +A L G +Y G + ++ S+H
Sbjct: 370 IL-YNKKDSALIQMADGNQSQLAMSHLNGQKMY-GKIIR--VTLSKH 412
>gi|301781136|ref|XP_002925987.1| PREDICTED: regulator of differentiation 1-like [Ailuropoda
melanoleuca]
Length = 567
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 93/170 (54%), Gaps = 16/170 (9%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 186 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGAVLKIITFTKNNQFQALLQYADPV 245
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 247
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 246 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL-- 302
Query: 248 QQPVPMV------GATANQYNGAQ-FAPPPPEQPMMHQPTAAGWGAVPPA 290
+P PM G ++ Y GA FAP HQ T AVP A
Sbjct: 303 -EP-PMAAAFGAPGIISSPYAGAAGFAP----AIGFHQATGLSVPAVPGA 346
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 215 QIFSKFGAVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYNAC-------CTLR 267
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 113
I +S T L+VK+ + +SRD+T LP
Sbjct: 268 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 296
>gi|224089408|ref|XP_002188238.1| PREDICTED: polypyrimidine tract-binding protein 3 [Taeniopygia
guttata]
Length = 488
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 71/109 (65%), Gaps = 1/109 (0%)
Query: 137 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 196
+VL +EN+ Y VTLD+L+ +FS FG V +I MF KN Q+L+QY D A AK +L
Sbjct: 147 SVLRIIVENVFYPVTLDILYQIFSKFGFVLRIIMFHKNNQFQSLLQYSDAMNAYYAKMSL 206
Query: 197 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
+GHCIY G C L I +S+ +L++K NND+SRD+T P + Q ++
Sbjct: 207 DGHCIYTGC-CTLRIEFSKLANLTVKYNNDKSRDFTRIDLPFGDGQRTV 254
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 98/199 (49%), Gaps = 31/199 (15%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+FS FGFV +I F K FQ+L+Q+SD A AK +LDG I G CTLRI
Sbjct: 168 IFSKFGFVLRIIMFHKNNQFQSLLQYSDAMNAYYAKMSLDGHCI-------YTGCCTLRI 220
Query: 86 TYSAHTDLSVKFQSHRSRDYTN---PY----------LPVAPSAIDASGQL------SVG 126
+S +L+VK+ + +SRD+T P+ +P PS + G L +
Sbjct: 221 EFSKLANLTVKYNNDKSRDFTRIDLPFGDGQRTVETSIPFGPSVLPVPGALGPLMVTTSA 280
Query: 127 LDGKKLEPE---SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 183
G P+ ++VLL S N + A+T L ++F +G V ++ + K G+ AL+Q
Sbjct: 281 APGHMTIPDIPGNSVLLVSNLNPE-AITPYGLFILFGVYGDVHRVKIMFKKRGI-ALVQM 338
Query: 184 PDVQTAVVAKEALEGHCIY 202
D A +A L G +Y
Sbjct: 339 ADATQAQLAINYLNGQRLY 357
>gi|395750059|ref|XP_003779055.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1 [Pongo abelii]
Length = 782
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 84/144 (58%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 399 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 458
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P QP++
Sbjct: 459 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPS-GRQPALAWD 516
Query: 249 Q---PVPMVGA-TANQYNGAQFAP 268
Q P P +A+ Y GA F P
Sbjct: 517 QNHGPRPXXXXISASPYAGAGFPP 540
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 427 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNAC-------CTLR 479
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRDYT P LP
Sbjct: 480 IDFSKLTSLNVKYNNDKSRDYTRPDLP 506
>gi|170042024|ref|XP_001848742.1| polypyrimidine tract binding protein [Culex quinquefasciatus]
gi|167865565|gb|EDS28948.1| polypyrimidine tract binding protein [Culex quinquefasciatus]
Length = 572
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 89/162 (54%), Gaps = 8/162 (4%)
Query: 82 TLRITYSAHTDLSVKFQSHRSRDYT-NPYLPVAPSAIDASGQLSVGLDGKKLEPE----- 135
T+ + +S H +L Q+H + D T +P P A+D + S
Sbjct: 90 TVYVQFSNHRELKTD-QNHTATDLTQSPTGSPLPLALDHANTNSTTAGTGANVGGNAGGP 148
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VL +E++ Y V+LD+L+ +F FG V KI F KN QALIQYPD TA AK+
Sbjct: 149 NTVLRVIVESLLYPVSLDILYQIFQRFGKVLKIVTFTKNNSFQALIQYPDATTAQHAKQT 208
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
L+G IY+ G C L I S+ T L++K NND+SRDYT P+ P
Sbjct: 209 LDGQNIYN-GCCTLRIDNSKLTSLNVKYNNDKSRDYTNPTLP 249
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 58/106 (54%), Gaps = 11/106 (10%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F FG V KI TF K FQAL+Q+ D TA AK LDG++I G CTLR
Sbjct: 170 QIFQRFGKVLKIVTFTKNNSFQALIQYPDATTAQHAKQTLDGQNIYN-------GCCTLR 222
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID----ASGQLSVG 126
I S T L+VK+ + +SRDYTNP LP D A G +S G
Sbjct: 223 IDNSKLTSLNVKYNNDKSRDYTNPTLPSGEPGSDVIASAGGLVSAG 268
>gi|170576691|ref|XP_001893730.1| hypothetical protein [Brugia malayi]
gi|158600096|gb|EDP37433.1| conserved hypothetical protein [Brugia malayi]
Length = 645
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 96/175 (54%), Gaps = 19/175 (10%)
Query: 112 VAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMF 171
++ SA+D S + +P S VL IENM Y VTLDVLH +FS +G V +I F
Sbjct: 398 ISASALDISA-------CTQQQPNS-VLRVIIENMLYPVTLDVLHQIFSRYGKVLRIITF 449
Query: 172 DKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY 231
+KN QAL+Q + +A +A+++L+G +Y+G C L I YS+ L++K NND+SRDY
Sbjct: 450 NKNNTFQALVQLSEANSAQLARQSLDGQNVYNGCCC-LRIDYSKLATLNVKYNNDKSRDY 508
Query: 232 TLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGA 286
T P+ P S L QQ + AT G Q P ++ P A +GA
Sbjct: 509 TNPNLP---SGELTLEQQLSLVSAAT-----GGQMGPTIAS--LVQSPFAFPFGA 553
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 63/117 (53%), Gaps = 7/117 (5%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+FS +G V +I TF K FQALVQ S+ +A A+ +LDG+++ G C LRI
Sbjct: 436 IFSRYGKVLRIITFNKNNTFQALVQLSEANSAQLARQSLDGQNVYN-------GCCCLRI 488
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 142
YS L+VK+ + +SRDYTNP LP ++ L G ++ P L+ S
Sbjct: 489 DYSKLATLNVKYNNDKSRDYTNPNLPSGELTLEQQLSLVSAATGGQMGPTIASLVQS 545
>gi|25058871|gb|AAH39896.1| Similar to ROD1 regulator of differentiation 1 (S. pombe), partial
[Homo sapiens]
Length = 618
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 214 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 273
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 274 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 330
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 97/232 (41%), Gaps = 64/232 (27%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 243 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYNAC-------CTLR 295
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPV----------------APSAID---------- 118
I +S T L+VK+ + +SRD+T LP AP I
Sbjct: 296 IDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAAAFGAPGIISSPYAGAAGFA 355
Query: 119 ------------------ASGQLSV---------GLDGKKLEPESNVLLASIENMQYAVT 151
A G L++ + G P ++VLL + N +T
Sbjct: 356 PAIGFPQATGLSVPAVPGALGPLTITSSAVTGRMAIPGASGIPGNSVLLVTNLNPDL-IT 414
Query: 152 LDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 202
L ++F +G V ++ MF+K AL+Q D A +A L G +Y
Sbjct: 415 PHGLFILFGVYGDVHRVKIMFNKKE--NALVQMADANQAQLAMNHLSGQRLY 464
>gi|357443609|ref|XP_003592082.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355481130|gb|AES62333.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|388492616|gb|AFK34374.1| unknown [Medicago truncatula]
Length = 443
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 129/283 (45%), Gaps = 63/283 (22%)
Query: 19 ASGERAHVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKN-------ALDGRSIPR 71
+ + +F FG + K+ A QAL+Q D +A SA + ++ GR++
Sbjct: 18 SENDLLQLFQPFGVITKLVMLR--AKNQALIQMQDVPSAVSALHFYGNTQPSIRGRNV-- 73
Query: 72 YLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKK 131
+ +S+H +L+ QS G+
Sbjct: 74 ------------YVQFSSHQELTTIDQSQ----------------------------GRG 93
Query: 132 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
EP + +LL +I ++ Y +T+DVL+ VFS G V+KI F K+ G QALIQY Q+++
Sbjct: 94 DEP-NRILLVTIHHVLYPITVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQYQSQQSSIT 152
Query: 192 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPV 251
A+ AL+G IYD G C+L I +S +L + NNDRSRD+T P+ P G+ P
Sbjct: 153 ARTALQGRNIYD-GCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLPTEQK-----GRPPQ 206
Query: 252 PMVGATANQYNGAQFAPPP----PEQPMMHQPTAAGWGAVPPA 290
G N Y G Q + P P+ P AA G +PP
Sbjct: 207 LGYGDAGNMY-GVQGSGPRTVGYPQMPNAAAIAAAFGGGLPPG 248
>gi|268532214|ref|XP_002631235.1| C. briggsae CBR-PTB-1 protein [Caenorhabditis briggsae]
Length = 610
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 86/145 (59%), Gaps = 2/145 (1%)
Query: 93 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTL 152
L ++ +HR + + + A+G +S G + +P S VL IENM + V+L
Sbjct: 184 LFAQYSTHRELKFDKSNKATSDTESVANGSVSNFEVGTQQQPNS-VLRTIIENMMFPVSL 242
Query: 153 DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 212
+VLH +F+ +G V +I F+KN QALIQ + +A +AK+ LE +Y+G C L I
Sbjct: 243 EVLHQLFARYGKVLRIITFNKNNTFQALIQMSEANSAQLAKQGLENQNVYNGC-CTLRID 301
Query: 213 YSRHTDLSIKVNNDRSRDYTLPSTP 237
YS+ + L++K NND+SRDYT P+ P
Sbjct: 302 YSKLSTLNVKYNNDKSRDYTNPNLP 326
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 59/102 (57%), Gaps = 9/102 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F+ +G V +I TF K FQAL+Q S+ +A AK L+ +++ G CTLR
Sbjct: 247 QLFARYGKVLRIITFNKNNTFQALIQMSEANSAQLAKQGLENQNVYN-------GCCTLR 299
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVG 126
I YS + L+VK+ + +SRDYTNP LP P + Q+++
Sbjct: 300 IDYSKLSTLNVKYNNDKSRDYTNPNLP--PGEMTLEQQIAIS 339
>gi|357126039|ref|XP_003564696.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Brachypodium distachyon]
Length = 443
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 107/221 (48%), Gaps = 40/221 (18%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRY--LLPENMGPCTL 83
V FG V K+ A QALVQ D + SA I Y + P G +
Sbjct: 25 VVQPFGTVAKLVMLR--AKNQALVQMEDLAASVSA--------IQYYTTIQPSVRGR-NV 73
Query: 84 RITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASI 143
+ YS+H +L+ SH G + + EP + +LL ++
Sbjct: 74 YLQYSSHQELTTDQSSH-------------------------GRNPDQDEP-NRILLVTV 107
Query: 144 ENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYD 203
+M Y +T++VLH VFS +G V+KI F K G QALIQY Q+A+ A AL G IYD
Sbjct: 108 HHMLYPMTVEVLHQVFSPYGFVEKIVTFQKTAGFQALIQYQSRQSAIQACGALHGRNIYD 167
Query: 204 GGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPS 244
G C+L I YS ++L + NNDRSRD+T PS P Q S
Sbjct: 168 -GCCQLDIQYSNLSELQVHYNNDRSRDFTNPSLPTEQRQRS 207
>gi|321470924|gb|EFX81898.1| hypothetical protein DAPPUDRAFT_302853 [Daphnia pulex]
Length = 540
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VL +E+M Y VTLDVL +FS G V KI F KN QALIQYPDV TA AK
Sbjct: 165 NTVLRVIVEHMVYPVTLDVLFQIFSKVGRVLKIVTFTKNNTFQALIQYPDVVTAQAAKLT 224
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
L+G IY+ C L I YS+ + L++K NND+SRDYT P+ P
Sbjct: 225 LDGQNIYNSC-CTLRIEYSKLSSLNVKYNNDKSRDYTNPTLP 265
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 56/95 (58%), Gaps = 7/95 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS G V KI TF K FQAL+Q+ D TA +AK LDG++I CTLR
Sbjct: 186 QIFSKVGRVLKIVTFTKNNTFQALIQYPDVVTAQAAKLTLDGQNIYN-------SCCTLR 238
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDA 119
I YS + L+VK+ + +SRDYTNP LP +DA
Sbjct: 239 IEYSKLSSLNVKYNNDKSRDYTNPTLPTGDHNLDA 273
>gi|410043023|ref|XP_003951547.1| PREDICTED: polypyrimidine tract-binding protein 3 [Pan troglodytes]
Length = 554
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 143 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 202
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 203 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 259
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 172 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 224
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRD+T LP
Sbjct: 225 IDFSKLTSLNVKYNNDKSRDFTRLDLP 251
>gi|426362704|ref|XP_004048495.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1
[Gorilla gorilla gorilla]
Length = 591
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 180 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 239
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 240 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 296
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 209 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 261
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRD+T LP
Sbjct: 262 IDFSKLTSLNVKYNNDKSRDFTRLDLP 288
>gi|432103873|gb|ELK30706.1| Polypyrimidine tract-binding protein 2 [Myotis davidii]
Length = 538
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL I+NM Y VTLDVLH +F+ FG V KI F KN QAL+QY D A AK
Sbjct: 143 QSPVLRIIIDNMYYPVTLDVLHQIFTKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 202
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 203 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 252
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F+ FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 165 QIFTKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 217
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S +L+VK+ + +SRDYT P LP
Sbjct: 218 IDFSKLVNLNVKYNNDKSRDYTRPDLP 244
>gi|349732190|ref|NP_001231826.1| polypyrimidine tract-binding protein 3 isoform 5 [Homo sapiens]
Length = 547
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 143 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 202
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 203 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 259
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 172 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 224
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRD+T LP
Sbjct: 225 IDFSKLTSLNVKYNNDKSRDFTRLDLP 251
>gi|170028938|ref|XP_001842351.1| polypyrimidine tract binding protein [Culex quinquefasciatus]
gi|167879401|gb|EDS42784.1| polypyrimidine tract binding protein [Culex quinquefasciatus]
Length = 535
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 89/162 (54%), Gaps = 8/162 (4%)
Query: 82 TLRITYSAHTDLSVKFQSHRSRDYT-NPYLPVAPSAIDASGQLSVGLDGKKLEPE----- 135
T+ + +S H +L Q+H + D T +P P A+D + S
Sbjct: 89 TVYVQFSNHRELKTD-QNHTATDLTQSPTGSPLPLALDHANTNSTTAGTGANVGGNAGGP 147
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VL +E++ Y V+LD+L+ +F FG V KI F KN QALIQYPD TA AK+
Sbjct: 148 NTVLRVIVESLLYPVSLDILYQIFQRFGKVLKIVTFTKNNSFQALIQYPDATTAQHAKQT 207
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
L+G IY+ G C L I S+ T L++K NND+SRDYT P+ P
Sbjct: 208 LDGQNIYN-GCCTLRIDNSKLTSLNVKYNNDKSRDYTNPTLP 248
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 58/106 (54%), Gaps = 11/106 (10%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F FG V KI TF K FQAL+Q+ D TA AK LDG++I G CTLR
Sbjct: 169 QIFQRFGKVLKIVTFTKNNSFQALIQYPDATTAQHAKQTLDGQNIYN-------GCCTLR 221
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID----ASGQLSVG 126
I S T L+VK+ + +SRDYTNP LP D A G +S G
Sbjct: 222 IDNSKLTSLNVKYNNDKSRDYTNPTLPSGEPGSDVIASAGGLVSAG 267
>gi|291382801|ref|XP_002708166.1| PREDICTED: ROD1 regulator of differentiation 1-like [Oryctolagus
cuniculus]
Length = 1000
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 619 EGTILPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 678
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 679 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 735
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 109/268 (40%), Gaps = 65/268 (24%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 648 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYNAC-------CTLR 700
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA------------------------------- 113
I +S T L+VK+ + +SRD+T LP
Sbjct: 701 IDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAAAFGAPGIMSSPYAGAAGFA 760
Query: 114 -------------PSAIDASGQLSV---------GLDGKKLEPESNVLLASIENMQYAVT 151
P+ A G L++ + G P ++VLL + N +T
Sbjct: 761 PAIGFPQATGLSVPAVPGALGPLAITSSAVTGRMAIPGGSGVPGNSVLLVTNLNPDL-IT 819
Query: 152 LDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 210
L ++F +G V ++ MF+K AL+Q D A +A L G +Y G +
Sbjct: 820 PHGLFILFGVYGDVHRVKIMFNKK--ENALVQMADANQAQLAMNHLSGQRLY-GKVLRAT 876
Query: 211 ISYSRHTDLSIKVNNDRSRDYTLPSTPM 238
+S + L + D+ ++P+
Sbjct: 877 LSKHQAVQLPREGQEDQGLTKDFSNSPL 904
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 76/193 (39%), Gaps = 20/193 (10%)
Query: 26 VFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G VH++ F K ALVQ +D A A N L G + + LR
Sbjct: 826 LFGVYGDVHRVKIMFNKKE--NALVQMADANQAQLAMNHLSG---------QRLYGKVLR 874
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIE 144
T S H + + + + T + G + + + P S L +
Sbjct: 875 ATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL--HLS 928
Query: 145 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 204
N+ +VT+D L +F G K F + ALIQ V+ A+ A L H + G
Sbjct: 929 NIPPSVTVDDLKNLFIEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDL--G 986
Query: 205 GFCKLHISYSRHT 217
L +S+S+ T
Sbjct: 987 ENHHLRVSFSKST 999
>gi|115441273|ref|NP_001044916.1| Os01g0867800 [Oryza sativa Japonica Group]
gi|113534447|dbj|BAF06830.1| Os01g0867800 [Oryza sativa Japonica Group]
gi|215697244|dbj|BAG91238.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 439
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 85/142 (59%), Gaps = 6/142 (4%)
Query: 107 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
N YL + + Q S G + + EP + +LL +I +M Y +T++VLH VFS +G V+
Sbjct: 68 NVYLQYSSHQELTTDQSSHGRNPDQEEP-NRILLVTIHHMLYPITIEVLHQVFSPYGFVE 126
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
KI F K+ G Q LIQY Q+A+ A AL G IYDG C+L I YS ++L + NND
Sbjct: 127 KIVTFQKSAGFQTLIQYQSRQSAIQAYGALHGRNIYDGC-CQLDIQYSNLSELQVHYNND 185
Query: 227 RSRDYTLPSTPMV----NSQPS 244
RSRD+T PS P +SQPS
Sbjct: 186 RSRDFTNPSLPTEQRSRSSQPS 207
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 115/246 (46%), Gaps = 45/246 (18%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFS +GFV KI TF+K+AGFQ L+Q+ ++A A AL GR+I G C L I
Sbjct: 118 VFSPYGFVEKIVTFQKSAGFQTLIQYQSRQSAIQAYGALHGRNIYD-------GCCQLDI 170
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVA------------PSAI-------DASGQLS-- 124
YS ++L V + + RSRD+TNP LP PS++ D Q+S
Sbjct: 171 QYSNLSELQVHYNNDRSRDFTNPSLPTEQRSRSSQPSYNDPSSLFGFQQPGDPYAQMSKA 230
Query: 125 ---VGLDGKKLEP------ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 175
G L P + LL S N + D L +FS +G + +I + KN
Sbjct: 231 AMIAAAFGGTLPPGVSGINDRCTLLVSNLNTD-KIDEDKLFNLFSMYGNIVRIKIL-KNK 288
Query: 176 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
ALIQ D A +A L+G ++ KL ++YS++ ++ + +RDY+
Sbjct: 289 PDHALIQMADGLQAELAVLYLKGAMLFGK---KLEVNYSKYPTVTADPD---ARDYSTSH 342
Query: 236 TPMVNS 241
NS
Sbjct: 343 LNRFNS 348
>gi|410928343|ref|XP_003977560.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Takifugu
rubripes]
Length = 534
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 98/182 (53%), Gaps = 12/182 (6%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
S+VL +EN+ Y V+LD L +FS FG V +I +F KN QAL+QYPD A AK +
Sbjct: 158 SSVLRVVVENLLYPVSLDALCQIFSKFGTVLRIIVFTKNSQFQALLQYPDAACAQAAKLS 217
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L+G IY+ C L IS+S+ T L++K NN++SRD+T P P + QP++
Sbjct: 218 LDGQNIYNAC-CTLRISFSKLTSLNVKYNNEKSRDFTRPDLPPGDGQPTLEHPSMAAAFA 276
Query: 256 A----TANQYNGA--QFAPPPPEQPMMHQPTA-AGWGAVPPASQSMPMMG----NHPYMP 304
A +A Y GA F+P QP + P A A+P A S+ + G P +P
Sbjct: 277 APGIISAAPYAGAAQTFSPSYTIQPAVFLPPAGVTVPALPGALTSLSLAGAARMGFPSLP 336
Query: 305 PG 306
G
Sbjct: 337 AG 338
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 7/88 (7%)
Query: 24 AHVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTL 83
+FS FG V +I F K + FQAL+Q+ D A +AK +LDG++I CTL
Sbjct: 178 CQIFSKFGTVLRIIVFTKNSQFQALLQYPDAACAQAAKLSLDGQNIYN-------ACCTL 230
Query: 84 RITYSAHTDLSVKFQSHRSRDYTNPYLP 111
RI++S T L+VK+ + +SRD+T P LP
Sbjct: 231 RISFSKLTSLNVKYNNEKSRDFTRPDLP 258
>gi|324504709|gb|ADY42030.1| Regulator of differentiation 1 [Ascaris suum]
Length = 560
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 75/118 (63%), Gaps = 2/118 (1%)
Query: 120 SGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQA 179
S L + + +P S VL IENM Y VTLDVLH +FS +G V +I F+KN QA
Sbjct: 138 SSALDISASCTQQQPNS-VLRVIIENMLYPVTLDVLHQIFSRYGKVLRIITFNKNNTFQA 196
Query: 180 LIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
L+Q + +A +A+++L+G +Y+G C L I YS+ L++K NND+SRDYT P+ P
Sbjct: 197 LVQLSEATSAQMARQSLDGQNVYNGCCC-LRIDYSKLATLNVKYNNDKSRDYTNPNLP 253
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 63/118 (53%), Gaps = 7/118 (5%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS +G V +I TF K FQALVQ S+ +A A+ +LDG+++ G C LR
Sbjct: 174 QIFSRYGKVLRIITFNKNNTFQALVQLSEATSAQMARQSLDGQNVYN-------GCCCLR 226
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 142
I YS L+VK+ + +SRDYTNP LP ++ L G ++ P L+ S
Sbjct: 227 IDYSKLATLNVKYNNDKSRDYTNPNLPSGELTLEQQLSLVSAATGGQMGPAIASLVQS 284
>gi|90085391|dbj|BAE91436.1| unnamed protein product [Macaca fascicularis]
Length = 352
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 71 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 130
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 131 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 187
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 100 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 152
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRD+T LP
Sbjct: 153 IDFSKLTSLNVKYNNDKSRDFTRLDLP 179
>gi|349732186|ref|NP_001231825.1| polypyrimidine tract-binding protein 3 isoform 4 [Homo sapiens]
gi|332832555|ref|XP_001149256.2| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Pan
troglodytes]
Length = 457
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 76 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 135
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 136 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 192
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 105 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 157
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRD+T LP
Sbjct: 158 IDFSKLTSLNVKYNNDKSRDFTRLDLP 184
>gi|441622594|ref|XP_003264050.2| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 3 isoform 1 [Nomascus leucogenys]
Length = 555
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 88/163 (53%), Gaps = 5/163 (3%)
Query: 85 ITYSAHTDLSVKF--QSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 142
I YS H +L R++D V ++ SG S +G L +S VL
Sbjct: 131 IQYSNHRELKTDNLPNQARAQDALQAVSAVQSGSLALSGGRSN--EGTVLPGQSPVLXII 188
Query: 143 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 202
IEN+ Y TL+VLH +FS FG V KI F KN QAL+QY D A AK AL+G IY
Sbjct: 189 IENLFYRGTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIY 248
Query: 203 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 249 N-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 290
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 203 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 255
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 113
I +S T L+VK+ + +SRD+T LP
Sbjct: 256 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 284
>gi|349732192|ref|NP_001231827.1| polypyrimidine tract-binding protein 3 isoform 6 [Homo sapiens]
gi|114626184|ref|XP_001149612.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 5 [Pan
troglodytes]
gi|397479183|ref|XP_003810907.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2 [Pan
paniscus]
gi|27882560|gb|AAH44585.1| ROD1 protein [Homo sapiens]
gi|119579503|gb|EAW59099.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_a [Homo
sapiens]
Length = 558
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 177 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 236
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 237 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 293
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 52/88 (59%), Gaps = 7/88 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 206 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 258
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPV 112
I +S T L+VK+ + +SRD+T LP
Sbjct: 259 IDFSKLTSLNVKYNNDKSRDFTRLDLPT 286
>gi|355567525|gb|EHH23866.1| hypothetical protein EGK_07422, partial [Macaca mulatta]
Length = 558
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 177 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 236
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 237 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 293
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 52/88 (59%), Gaps = 7/88 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 206 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 258
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPV 112
I +S T L+VK+ + +SRD+T LP
Sbjct: 259 IDFSKLTSLNVKYNNDKSRDFTRLDLPT 286
>gi|390458239|ref|XP_003732081.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2
[Callithrix jacchus]
Length = 524
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 143 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 202
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 203 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 259
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 172 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 224
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRD+T LP
Sbjct: 225 IDFSKLTSLNVKYNNDKSRDFTRLDLP 251
>gi|402896665|ref|XP_003911411.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 3 [Papio
anubis]
Length = 521
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 140 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 199
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 200 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 256
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 169 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 221
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRD+T LP
Sbjct: 222 IDFSKLTSLNVKYNNDKSRDFTRLDLP 248
>gi|380801045|gb|AFE72398.1| regulator of differentiation 1 isoform 1, partial [Macaca mulatta]
Length = 456
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 75 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 134
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 135 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 191
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 104 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 156
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRD+T LP
Sbjct: 157 IDFSKLTSLNVKYNNDKSRDFTRLDLP 183
>gi|354486792|ref|XP_003505562.1| PREDICTED: regulator of differentiation 1-like [Cricetulus griseus]
Length = 643
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 262 EGAVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPL 321
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 322 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 378
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 98/232 (42%), Gaps = 64/232 (27%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 291 QIFSKFGTVLKIITFTKNNQFQALLQYADPLNAHYAKMALDGQNIYNAC-------CTLR 343
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPV----------------APSAID---------- 118
I +S T L+VK+ + +SRD+T LP AP I
Sbjct: 344 IDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAAAFGAPGIISSPYAGAAGFA 403
Query: 119 ------------------ASGQLSV---------GLDGKKLEPESNVLLASIENMQYAVT 151
A G L++ + G P ++VLL + N + +T
Sbjct: 404 PAIGFPQATGLSVPAVPGALGPLTLTSSAVTGRMAIPGASGIPGNSVLLVTNLNPDF-IT 462
Query: 152 LDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 202
L ++F +G V ++ MF+K AL+Q D A +A L G +Y
Sbjct: 463 PHGLFILFGVYGDVHRVKIMFNKKE--NALVQMADASQAQLAMNHLSGQRLY 512
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 77/193 (39%), Gaps = 20/193 (10%)
Query: 26 VFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G VH++ F K ALVQ +D A A N L G + + LR
Sbjct: 469 LFGVYGDVHRVKIMFNKKE--NALVQMADASQAQLAMNHLSG---------QRLYGKVLR 517
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIE 144
T S H + + + + T + G + + + P S L +
Sbjct: 518 ATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL--HLS 571
Query: 145 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 204
N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H + G
Sbjct: 572 NIPPSVTMDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDL--G 629
Query: 205 GFCKLHISYSRHT 217
L +S+S+ T
Sbjct: 630 ENHHLRVSFSKST 642
>gi|402896661|ref|XP_003911409.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Papio
anubis]
Length = 524
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 143 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 202
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 203 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 259
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 172 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 224
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRD+T LP
Sbjct: 225 IDFSKLTSLNVKYNNDKSRDFTRLDLP 251
>gi|426362706|ref|XP_004048496.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2
[Gorilla gorilla gorilla]
gi|4514554|dbj|BAA75466.1| Rod1 [Homo sapiens]
Length = 521
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 140 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 199
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 200 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 256
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 169 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 221
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRD+T LP
Sbjct: 222 IDFSKLTSLNVKYNNDKSRDFTRLDLP 248
>gi|355753108|gb|EHH57154.1| hypothetical protein EGM_06734, partial [Macaca fascicularis]
Length = 539
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 158 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 217
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 218 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 274
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 187 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 239
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 113
I +S T L+VK+ + +SRD+T LP
Sbjct: 240 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 268
>gi|297685129|ref|XP_002820148.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Pongo
abelii]
Length = 558
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 177 EGAVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 236
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 237 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 293
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 52/88 (59%), Gaps = 7/88 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 206 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 258
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPV 112
I +S T L+VK+ + +SRD+T LP
Sbjct: 259 IDFSKLTSLNVKYNNDKSRDFTRLDLPT 286
>gi|255003738|ref|NP_001157260.1| polypyrimidine tract-binding protein 3 isoform 2 [Homo sapiens]
gi|397479181|ref|XP_003810906.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Pan
paniscus]
gi|410043017|ref|XP_003951545.1| PREDICTED: polypyrimidine tract-binding protein 3 [Pan troglodytes]
gi|194380114|dbj|BAG63824.1| unnamed protein product [Homo sapiens]
Length = 524
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 143 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 202
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 203 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 259
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 172 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 224
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRD+T LP
Sbjct: 225 IDFSKLTSLNVKYNNDKSRDFTRLDLP 251
>gi|296190586|ref|XP_002743247.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1
[Callithrix jacchus]
Length = 558
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 177 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 236
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 237 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 293
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 52/88 (59%), Gaps = 7/88 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 206 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 258
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPV 112
I +S T L+VK+ + +SRD+T LP
Sbjct: 259 IDFSKLTSLNVKYNNDKSRDFTRLDLPT 286
>gi|403266191|ref|XP_003925277.1| PREDICTED: polypyrimidine tract-binding protein 3 [Saimiri
boliviensis boliviensis]
Length = 558
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 177 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 236
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 237 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 293
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 206 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 258
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRD+T LP
Sbjct: 259 IDFSKLTSLNVKYNNDKSRDFTRLDLP 285
>gi|343959136|dbj|BAK63423.1| regulator of differentiation 1 [Pan troglodytes]
Length = 524
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 143 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 202
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 203 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 259
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 172 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 224
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRD+T LP
Sbjct: 225 IDFSKLTSLNVKYNNDKSRDFTRLDLP 251
>gi|395740821|ref|XP_002820150.2| PREDICTED: polypyrimidine tract-binding protein 3 isoform 3 [Pongo
abelii]
Length = 524
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 143 EGAVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 202
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 203 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 259
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 172 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 224
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRD+T LP
Sbjct: 225 IDFSKLTSLNVKYNNDKSRDFTRLDLP 251
>gi|344244560|gb|EGW00664.1| Regulator of differentiation 1 [Cricetulus griseus]
Length = 523
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 120 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 175
SG LS+ +G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN
Sbjct: 130 SGNLSLPGAPSNEGAVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNN 189
Query: 176 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 190 QFQALLQYADPLNAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLD 248
Query: 236 TPMVNSQPSI 245
P + QPS+
Sbjct: 249 LPTGDGQPSL 258
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 171 QIFSKFGTVLKIITFTKNNQFQALLQYADPLNAHYAKMALDGQNIYN-------ACCTLR 223
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 113
I +S T L+VK+ + +SRD+T LP
Sbjct: 224 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 252
>gi|119579506|gb|EAW59102.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_c [Homo
sapiens]
Length = 482
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 101 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 160
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 161 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 217
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 130 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 182
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRD+T LP
Sbjct: 183 IDFSKLTSLNVKYNNDKSRDFTRLDLP 209
>gi|198435860|ref|XP_002127727.1| PREDICTED: similar to polypyrimidine tract binding protein 1 [Ciona
intestinalis]
Length = 516
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 91/173 (52%), Gaps = 16/173 (9%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL A IENM Y +TLDVLH +FS FG + KI F K+ QALIQ D + AK +L+
Sbjct: 147 VLRAVIENMLYPITLDVLHTIFSKFGVILKIITFTKSSQFQALIQMADALQSQTAKLSLD 206
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGAT 257
G IY+ G C L I YS+ + L++K NND+SRDYT P + + SILG G+T
Sbjct: 207 GQNIYN-GCCTLRIEYSKLSSLNVKFNNDKSRDYTRNDLP--SGEASILG------TGST 257
Query: 258 -ANQYNGAQFAPPPPEQPM---MHQPTAAGWGAVPPASQSMP---MMGNHPYM 303
+ GA P P + + + Q A A Q + M GN +M
Sbjct: 258 LQSMLGGAGLMPSPYQNNIAAAIQQSQLASLANASGALQHLTGTNMAGNSNHM 310
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 107/247 (43%), Gaps = 63/247 (25%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+FS FG + KI TF K++ FQAL+Q +D + +AK +LDG++I G CTLRI
Sbjct: 167 IFSKFGVILKIITFTKSSQFQALIQMADALQSQTAKLSLDGQNIYN-------GCCTLRI 219
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQ-LSVGLDGKKL--EPESNVLLAS 142
YS + L+VKF + +SRDYT LP ++I +G L L G L P N + A+
Sbjct: 220 EYSKLSSLNVKFNNDKSRDYTRNDLPSGEASILGTGSTLQSMLGGAGLMPSPYQNNIAAA 279
Query: 143 IENMQYA-----------------------------------------------VTLDVL 155
I+ Q A VT L
Sbjct: 280 IQQSQLASLANASGALQHLTGTNMAGNSNHMVTQLAAMVGQTSVLHVSNLNEEMVTPQSL 339
Query: 156 HMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYS 214
++F +G V ++ M+ K AL+Q D Q A + L G +YD L I S
Sbjct: 340 FILFGVYGDVNRVKIMYQKKSN--ALVQMNDHQQAQTVIKYLHGVKLYDR---PLQIMMS 394
Query: 215 RHTDLSI 221
RH + +
Sbjct: 395 RHNQVQM 401
>gi|393904664|gb|EJD73763.1| polypyrimidine tract-binding protein 1 [Loa loa]
Length = 546
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 97/178 (54%), Gaps = 19/178 (10%)
Query: 112 VAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMF 171
++ SA+D S + +P S VL IENM Y VTLDVL+ +FS +G V +I F
Sbjct: 126 ISASALDISA-------CTQQQPNS-VLRVIIENMLYPVTLDVLYQIFSRYGKVLRIITF 177
Query: 172 DKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY 231
+KN QAL+Q + +A +A+++L+G +Y+G C L I YS+ L++K NND+SRDY
Sbjct: 178 NKNNTFQALVQLSEANSAQLARQSLDGQNVYNGCCC-LRIDYSKLATLNVKYNNDKSRDY 236
Query: 232 TLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPP 289
T P+ P S L QQ + AT G Q P ++ P A +GA P
Sbjct: 237 TNPNLP---SGELTLEQQLSLVSAAT-----GGQMGPAIAS--LVQSPFAFPFGAANP 284
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 7/110 (6%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS +G V +I TF K FQALVQ S+ +A A+ +LDG+++ G C LR
Sbjct: 163 QIFSRYGKVLRIITFNKNNTFQALVQLSEANSAQLARQSLDGQNVYN-------GCCCLR 215
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP 134
I YS L+VK+ + +SRDYTNP LP ++ L G ++ P
Sbjct: 216 IDYSKLATLNVKYNNDKSRDYTNPNLPSGELTLEQQLSLVSAATGGQMGP 265
>gi|402896663|ref|XP_003911410.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2 [Papio
anubis]
Length = 555
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 174 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 233
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 234 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 290
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 203 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 255
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRD+T LP
Sbjct: 256 IDFSKLTSLNVKYNNDKSRDFTRLDLP 282
>gi|395824362|ref|XP_003785435.1| PREDICTED: polypyrimidine tract-binding protein 3 [Otolemur
garnettii]
Length = 534
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 153 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 212
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 213 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 269
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 182 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYNAC-------CTLR 234
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 113
I +S T L+VK+ + +SRD+T LP
Sbjct: 235 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 263
>gi|255003744|ref|NP_001157262.1| polypyrimidine tract-binding protein 3 isoform 3 [Homo sapiens]
gi|114626182|ref|XP_528390.2| PREDICTED: polypyrimidine tract-binding protein 3 isoform 6 [Pan
troglodytes]
gi|397479185|ref|XP_003810908.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 3 [Pan
paniscus]
gi|51476645|emb|CAH18301.1| hypothetical protein [Homo sapiens]
Length = 555
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 174 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 233
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 234 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 290
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 203 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 255
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 113
I +S T L+VK+ + +SRD+T LP
Sbjct: 256 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 284
>gi|395740824|ref|XP_002820149.2| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2 [Pongo
abelii]
Length = 555
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 174 EGAVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 233
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 234 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 290
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 203 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 255
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRD+T LP
Sbjct: 256 IDFSKLTSLNVKYNNDKSRDFTRLDLP 282
>gi|410043020|ref|XP_003951546.1| PREDICTED: polypyrimidine tract-binding protein 3 [Pan troglodytes]
Length = 558
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 177 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 236
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 237 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 293
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 206 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 258
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRD+T LP
Sbjct: 259 IDFSKLTSLNVKYNNDKSRDFTRLDLP 285
>gi|187608032|ref|NP_001120518.1| polypyrimidine tract binding protein 3 [Xenopus (Silurana)
tropicalis]
gi|170287806|gb|AAI61422.1| LOC100145652 protein [Xenopus (Silurana) tropicalis]
Length = 519
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 74/120 (61%), Gaps = 1/120 (0%)
Query: 126 GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD 185
G +G L +S VL +EN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 138 GGEGLVLSGQSPVLRIIVENLFYPVTLEVLHQIFSKFGTVIKIITFTKNNQFQALLQYAD 197
Query: 186 VQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 198 PMNAHHAKVALDGQNIYN-ACCTLRIEFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 256
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 52/88 (59%), Gaps = 7/88 (7%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLRI
Sbjct: 170 IFSKFGTVIKIITFTKNNQFQALLQYADPMNAHHAKVALDGQNIYN-------ACCTLRI 222
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVA 113
+S T L+VK+ + +SRD+T LP
Sbjct: 223 EFSKLTSLNVKYNNDKSRDFTRLDLPTG 250
>gi|38569466|ref|NP_005147.3| polypyrimidine tract-binding protein 3 isoform 1 [Homo sapiens]
gi|218511814|sp|O95758.2|PTBP3_HUMAN RecName: Full=Polypyrimidine tract-binding protein 3; AltName:
Full=Regulator of differentiation 1; Short=Rod1
gi|119579504|gb|EAW59100.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b [Homo
sapiens]
gi|119579505|gb|EAW59101.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b [Homo
sapiens]
Length = 552
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 171 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 230
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 231 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 287
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 200 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 252
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRD+T LP
Sbjct: 253 IDFSKLTSLNVKYNNDKSRDFTRLDLP 279
>gi|312097472|ref|XP_003148986.1| hypothetical protein LOAG_13430 [Loa loa]
Length = 255
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 97/178 (54%), Gaps = 19/178 (10%)
Query: 112 VAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMF 171
++ SA+D S + +P S VL IENM Y VTLDVL+ +FS +G V +I F
Sbjct: 19 ISASALDISA-------CTQQQPNS-VLRVIIENMLYPVTLDVLYQIFSRYGKVLRIITF 70
Query: 172 DKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY 231
+KN QAL+Q + +A +A+++L+G +Y+G C L I YS+ L++K NND+SRDY
Sbjct: 71 NKNNTFQALVQLSEANSAQLARQSLDGQNVYNGCCC-LRIDYSKLATLNVKYNNDKSRDY 129
Query: 232 TLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPP 289
T P+ P S L QQ + AT G Q P ++ P A +GA P
Sbjct: 130 TNPNLP---SGELTLEQQLSLVSAAT-----GGQMGPAIAS--LVQSPFAFPFGAANP 177
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 7/110 (6%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS +G V +I TF K FQALVQ S+ +A A+ +LDG+++ G C LR
Sbjct: 56 QIFSRYGKVLRIITFNKNNTFQALVQLSEANSAQLARQSLDGQNVYN-------GCCCLR 108
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP 134
I YS L+VK+ + +SRDYTNP LP ++ L G ++ P
Sbjct: 109 IDYSKLATLNVKYNNDKSRDYTNPNLPSGELTLEQQLSLVSAATGGQMGP 158
>gi|296082547|emb|CBI21552.3| unnamed protein product [Vitis vinifera]
Length = 374
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 104/208 (50%), Gaps = 34/208 (16%)
Query: 30 FGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSA 89
FG V K+ A QAL+Q D +A SA + Y N+ P
Sbjct: 29 FGVVTKLVMLR--AKNQALLQMQDVASAVSA--------LQYY---ANVQPSV------R 69
Query: 90 HTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYA 149
++ V+F SH+ + Q S G G + + +LL +I ++ Y
Sbjct: 70 GRNVYVQFSSHQE--------------LTTMDQNSQGRKGDQDAQPNRILLVTIHHLLYP 115
Query: 150 VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKL 209
+T++VLH VFS G V+KI F K+ G QALIQY Q+AV A AL+G IYD G C+L
Sbjct: 116 ITVEVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSAINALQGRNIYD-GCCQL 174
Query: 210 HISYSRHTDLSIKVNNDRSRDYTLPSTP 237
I +S T+L + NN+RSRD+T PS P
Sbjct: 175 DIQFSNLTELQVNYNNERSRDFTNPSLP 202
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 56/87 (64%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
VFS GFV KI TF+K+AGFQAL+Q+ ++A SA NAL GR+I G C L
Sbjct: 123 QVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSAINALQGRNIYD-------GCCQLD 175
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T+L V + + RSRD+TNP LP
Sbjct: 176 IQFSNLTELQVNYNNERSRDFTNPSLP 202
>gi|359493141|ref|XP_002264689.2| PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform 1
[Vitis vinifera]
Length = 445
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 110/220 (50%), Gaps = 50/220 (22%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKN-------ALDGRSIPRYLLPEN 77
+F FG + K+ A QAL+Q D +A++A ++ GR++
Sbjct: 24 QLFQPFGVITKLVMLR--AKNQALLQMQDVPSAANAMQFYTNVQPSIRGRNV-------- 73
Query: 78 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 137
+ +S+H +L+ Q+ + R G ++ P +
Sbjct: 74 ------YVQFSSHQELTTVDQNAQGR-------------------------GDEVSP-NR 101
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
+LL +I ++ Y +T++VLH VFS G V+KI F K+ G QALIQY Q+AV A+ +L+
Sbjct: 102 ILLVTIHHLLYPITVEVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARNSLQ 161
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
G IYDG C+L I +S +L + NN+RSRD+T PS P
Sbjct: 162 GRNIYDGC-CQLDIQFSNLDELQVNYNNERSRDFTNPSLP 200
>gi|300681487|emb|CBH32581.1| RNA recognition domain containing protein [Triticum aestivum]
Length = 277
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 95/170 (55%), Gaps = 16/170 (9%)
Query: 107 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
N YL + + Q S G + + EP + +LL ++ +M Y +T++VLH VFS +G V+
Sbjct: 72 NVYLQYSSHQELTTDQSSHGRNPDQDEP-NRILLVTVHHMLYPMTVEVLHQVFSPYGFVE 130
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
KI F K G QALIQ+ Q+A+ A AL G IYDG C+L I YS ++L + NND
Sbjct: 131 KIVTFQKTAGFQALIQFQSRQSAIQAAGALHGRNIYDGC-CQLDIQYSNLSELQVHYNND 189
Query: 227 RSRDYTLPSTP---------MVNSQPSILG-QQPVPMVGATANQYNGAQF 266
RSRD+T PS P + + PS+ G QQP G A Q++ F
Sbjct: 190 RSRDFTNPSLPTEQRPRSSQLGYNDPSLFGFQQP----GGKALQFSFTFF 235
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFS +GFV KI TF+KTAGFQAL+QF ++A A AL GR+I G C L I
Sbjct: 122 VFSPYGFVEKIVTFQKTAGFQALIQFQSRQSAIQAAGALHGRNIYD-------GCCQLDI 174
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLP 111
YS ++L V + + RSRD+TNP LP
Sbjct: 175 QYSNLSELQVHYNNDRSRDFTNPSLP 200
>gi|25146811|ref|NP_741041.1| Protein PTB-1, isoform a [Caenorhabditis elegans]
gi|20338920|emb|CAA85411.3| Protein PTB-1, isoform a [Caenorhabditis elegans]
Length = 615
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 92/156 (58%), Gaps = 13/156 (8%)
Query: 82 TLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLA 141
TL YS H +L KF +++ ++ + A+G +S G + +P S VL
Sbjct: 187 TLFAQYSTHREL--KFDKNKA---------ISDTESVANGSVSNFEVGTQQQPNS-VLRT 234
Query: 142 SIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCI 201
IENM + V+LDVL+ +F+ +G V +I F+KN QAL+Q + +A +AK+ LE +
Sbjct: 235 IIENMMFPVSLDVLYQLFTRYGKVLRIITFNKNNTFQALVQMSEANSAQLAKQGLENQNV 294
Query: 202 YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
Y+G C L I YS+ + L++K NND+SRDYT P+ P
Sbjct: 295 YNGC-CTLRIDYSKLSTLNVKYNNDKSRDYTNPNLP 329
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 59/101 (58%), Gaps = 7/101 (6%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F+ +G V +I TF K FQALVQ S+ +A AK L+ +++ G CTLR
Sbjct: 250 QLFTRYGKVLRIITFNKNNTFQALVQMSEANSAQLAKQGLENQNVYN-------GCCTLR 302
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSV 125
I YS + L+VK+ + +SRDYTNP LP ++ + +S+
Sbjct: 303 IDYSKLSTLNVKYNNDKSRDYTNPNLPAGEMTLEQTIAMSI 343
>gi|328788959|ref|XP_625087.3| PREDICTED: polypyrimidine tract-binding protein 2 [Apis mellifera]
Length = 449
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VL +E M Y ++LDVL+ +F+ FG V KI F KN QALIQY D+ +A AK +
Sbjct: 33 NTVLRVIVEQMVYPISLDVLYQIFTRFGKVLKIVTFTKNNTFQALIQYADMLSAQTAKLS 92
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
LEG IY+ C L I YS+ +L++K NND+SRDYT PS P
Sbjct: 93 LEGQNIYN-SCCTLRIDYSKMQNLNVKYNNDKSRDYTNPSLP 133
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 67/108 (62%), Gaps = 10/108 (9%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F+ FG V KI TF K FQAL+Q++D +A +AK +L+G++I CTLR
Sbjct: 54 QIFTRFGKVLKIVTFTKNNTFQALIQYADMLSAQTAKLSLEGQNIYNSC-------CTLR 106
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKL 132
I YS +L+VK+ + +SRDYTNP LP + +DA+ S+ L G+ L
Sbjct: 107 IDYSKMQNLNVKYNNDKSRDYTNPSLPTGDANLDAA---SLALGGELL 151
>gi|383854460|ref|XP_003702739.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Megachile
rotundata]
Length = 552
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VL +E M Y ++LDVL+ +F+ FG V KI F KN QALIQY D+ +A AK +
Sbjct: 87 NTVLRVIVEQMVYPISLDVLYQIFTRFGKVLKIVTFTKNSTFQALIQYADMLSAQTAKLS 146
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
LEG IY+ C L I YS+ +L++K NND+SRDYT PS P
Sbjct: 147 LEGQNIYNSC-CTLRIDYSKMQNLNVKYNNDKSRDYTNPSLP 187
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 68/108 (62%), Gaps = 10/108 (9%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F+ FG V KI TF K + FQAL+Q++D +A +AK +L+G++I CTLR
Sbjct: 108 QIFTRFGKVLKIVTFTKNSTFQALIQYADMLSAQTAKLSLEGQNIYN-------SCCTLR 160
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKL 132
I YS +L+VK+ + +SRDYTNP LP + +DA+ S+ L G+ L
Sbjct: 161 IDYSKMQNLNVKYNNDKSRDYTNPSLPTGDANLDAA---SLALGGELL 205
>gi|413933762|gb|AFW68313.1| hypothetical protein ZEAMMB73_143783 [Zea mays]
Length = 251
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 103/226 (45%), Gaps = 47/226 (20%)
Query: 19 ASGERAHVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKN-------ALDGRSIPR 71
A + + FG V KI Q L+Q D + SA ++ GR++
Sbjct: 18 AESDLLQLLQPFGVVSKIVMLRAKNQAQTLLQMEDIHASVSALQYYTSVQPSIRGRNV-- 75
Query: 72 YLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKK 131
+ +S+H +L+ SH G + +
Sbjct: 76 ------------YMQFSSHQELTTDQSSH-------------------------GRNSDQ 98
Query: 132 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
+ +LL +I +M Y +T++VLH VF A+G V+KI F K+ G QALIQ+ Q AV
Sbjct: 99 ESEPNRILLVTIHHMIYPITVEVLHQVFKAYGFVEKIVTFQKSAGFQALIQFHSRQEAVE 158
Query: 192 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
A +L G IYDG C+L I YS ++L + NNDRSRD+T PS P
Sbjct: 159 AFGSLHGRNIYDGC-CQLDIQYSNLSELQVHYNNDRSRDFTNPSLP 203
>gi|328712478|ref|XP_001947870.2| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 1
[Acyrthosiphon pisum]
Length = 613
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VL +E+M + ++LDVL+ +FS +G V KI F KN Q LIQYPDV TA AK +
Sbjct: 193 NTVLRVIVEHMVFPISLDVLYEIFSRYGKVLKIVTFTKNNSFQVLIQYPDVVTAQSAKLS 252
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
L+G IY CKL I YS+ + L++K NND+SRDYT P+ P
Sbjct: 253 LDGQNIYT-SCCKLRIEYSKLSSLNVKYNNDKSRDYTNPTLP 293
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 55/93 (59%), Gaps = 7/93 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS +G V KI TF K FQ L+Q+ D TA SAK +LDG++I C LR
Sbjct: 214 EIFSRYGKVLKIVTFTKNNSFQVLIQYPDVVTAQSAKLSLDGQNI-------YTSCCKLR 266
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAI 117
I YS + L+VK+ + +SRDYTNP LP + +
Sbjct: 267 IEYSKLSSLNVKYNNDKSRDYTNPTLPNGDNTV 299
>gi|296081200|emb|CBI18226.3| unnamed protein product [Vitis vinifera]
Length = 443
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 111/213 (52%), Gaps = 38/213 (17%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F FG + K+ A QAL+Q D +A++A N+ P ++R
Sbjct: 24 QLFQPFGVITKLVMLR--AKNQALLQMQDVPSAANAMQ-----------FYTNVQP-SIR 69
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIE 144
++ V+F SH+ + +D + Q G+ EP + +LL +I
Sbjct: 70 -----GRNVYVQFSSHQE-----------LTTVDQNAQ------GRGDEP-NRILLVTIH 106
Query: 145 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 204
++ Y +T++VLH VFS G V+KI F K+ G QALIQY Q+AV A+ +L+G IYD
Sbjct: 107 HLLYPITVEVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARNSLQGRNIYD- 165
Query: 205 GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
G C+L I +S +L + NN+RSRD+T PS P
Sbjct: 166 GCCQLDIQFSNLDELQVNYNNERSRDFTNPSLP 198
>gi|328712476|ref|XP_003244820.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 2
[Acyrthosiphon pisum]
Length = 581
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VL +E+M + ++LDVL+ +FS +G V KI F KN Q LIQYPDV TA AK +
Sbjct: 161 NTVLRVIVEHMVFPISLDVLYEIFSRYGKVLKIVTFTKNNSFQVLIQYPDVVTAQSAKLS 220
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
L+G IY CKL I YS+ + L++K NND+SRDYT P+ P
Sbjct: 221 LDGQNIYT-SCCKLRIEYSKLSSLNVKYNNDKSRDYTNPTLP 261
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 55/93 (59%), Gaps = 7/93 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS +G V KI TF K FQ L+Q+ D TA SAK +LDG++I C LR
Sbjct: 182 EIFSRYGKVLKIVTFTKNNSFQVLIQYPDVVTAQSAKLSLDGQNI-------YTSCCKLR 234
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAI 117
I YS + L+VK+ + +SRDYTNP LP + +
Sbjct: 235 IEYSKLSSLNVKYNNDKSRDYTNPTLPNGDNTV 267
>gi|363814551|ref|NP_001242751.1| uncharacterized protein LOC100819672 [Glycine max]
gi|255639782|gb|ACU20184.1| unknown [Glycine max]
Length = 431
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 106/220 (48%), Gaps = 53/220 (24%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKN-------ALDGRSIPRYLLPEN 77
+F FG + K+ A QAL+Q D +A +A ++ GR++
Sbjct: 24 QLFQPFGVITKLVMLR--AKNQALIQMQDVPSAVNALQFYANVQPSIRGRNV-------- 73
Query: 78 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 137
+ +S+H +L+ QS G+ EP +
Sbjct: 74 ------YVQFSSHQELTTMEQSQ----------------------------GRGDEP-NR 98
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
+LL ++ +M Y +T+DVL+ VFS G V+KI F K+ G QALIQY Q+AV A+ L+
Sbjct: 99 ILLVTVHHMLYPMTVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQYQSRQSAVAARSTLQ 158
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
G IYDG C+L I +S +L + NNDRSRD+T P+ P
Sbjct: 159 GRNIYDGC-CQLDIQFSNLDELQVNYNNDRSRDFTNPNLP 197
>gi|413949172|gb|AFW81821.1| hypothetical protein ZEAMMB73_476847 [Zea mays]
Length = 339
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 105/226 (46%), Gaps = 49/226 (21%)
Query: 19 ASGERAHVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKN-------ALDGRSIPR 71
A + + FG V KI A QAL+Q D + SA ++ GR++
Sbjct: 103 AESDLLQLLQPFGMVSKIVMLR--AKNQALLQMEDLHASVSALQYYTSVQPSIRGRNV-- 158
Query: 72 YLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKK 131
+ +S+H +L+ SH G + +
Sbjct: 159 ------------YMQFSSHQELTTDQSSH-------------------------GRNSDQ 181
Query: 132 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
+ +LL +I +M Y +T+++LH VF A+G V+KI F K+ G QALIQY Q AV
Sbjct: 182 GSEPNRILLVTIHHMIYPITVEILHQVFKAYGFVEKIVTFQKSAGFQALIQYHSRQEAVE 241
Query: 192 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
A +L G IYDG C+L I YS ++L + NNDRSRD+T PS P
Sbjct: 242 AFGSLHGRNIYDGC-CQLDIQYSNLSELQVHYNNDRSRDFTNPSLP 286
>gi|359480735|ref|XP_002277938.2| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 1 [Vitis vinifera]
Length = 448
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 104/208 (50%), Gaps = 34/208 (16%)
Query: 30 FGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSA 89
FG V K+ A QAL+Q D +A SA + Y N+ P
Sbjct: 29 FGVVTKLVMLR--AKNQALLQMQDVASAVSA--------LQYY---ANVQPSV------R 69
Query: 90 HTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYA 149
++ V+F SH+ + Q S G G + + +LL +I ++ Y
Sbjct: 70 GRNVYVQFSSHQE--------------LTTMDQNSQGRKGDQDAQPNRILLVTIHHLLYP 115
Query: 150 VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKL 209
+T++VLH VFS G V+KI F K+ G QALIQY Q+AV A AL+G IYD G C+L
Sbjct: 116 ITVEVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSAINALQGRNIYD-GCCQL 174
Query: 210 HISYSRHTDLSIKVNNDRSRDYTLPSTP 237
I +S T+L + NN+RSRD+T PS P
Sbjct: 175 DIQFSNLTELQVNYNNERSRDFTNPSLP 202
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 56/87 (64%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
VFS GFV KI TF+K+AGFQAL+Q+ ++A SA NAL GR+I G C L
Sbjct: 123 QVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSAINALQGRNIYD-------GCCQLD 175
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T+L V + + RSRD+TNP LP
Sbjct: 176 IQFSNLTELQVNYNNERSRDFTNPSLP 202
>gi|392341647|ref|XP_003754390.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1-like [Rattus norvegicus]
gi|392349693|ref|XP_003750446.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1-like [Rattus norvegicus]
Length = 558
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 94/167 (56%), Gaps = 11/167 (6%)
Query: 119 ASGQLSVGLDGKK-LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL 177
AS + +D K + +S+VL +EN+ Y VTLDVLH +FS FG + K+ MF KN
Sbjct: 162 ASAASTAAVDAKMVMAGQSSVLRIIVENLFYPVTLDVLHQIFSKFGTILKLIMFTKNNQF 221
Query: 178 QALIQYPDVQTAVVAKEALEGHCIYDGGFC-KLHISYSRHTDLSIKVNNDRSRDYTLPST 236
QAL+Q + AK +L+G IY C LHI +S+ T L++K NND+SRDY P
Sbjct: 222 QALLQDAGPVSTQHAKLSLDGQNIYSA--CXTLHIDFSKLTSLNVKYNNDKSRDYRQPGL 279
Query: 237 PMVNSQPSILGQQPVPMVGA----TANQYNGAQFAP--PPPEQPMMH 277
P +SQPS+ Q + G + +QY GA+F P P P +H
Sbjct: 280 PSGDSQPSV-DQTMAAVFGTLSIMSVSQYAGARFPPTFAIPXVPNVH 325
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC-TL 83
+FS FG + K+ F K FQAL+Q + + AK +LDG++I C TL
Sbjct: 201 QIFSKFGTILKLIMFTKNNQFQALLQDAGPVSTQHAKLSLDGQNI--------YSACXTL 252
Query: 84 RITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDY P LP S
Sbjct: 253 HIDFSKLTSLNVKYNNDKSRDYRQPGLPSGDS 284
>gi|125827109|ref|XP_001335967.1| PREDICTED: regulator of differentiation 1 [Danio rerio]
Length = 522
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 74/118 (62%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
DG + +S VL +EN+ Y V+L+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 142 DGGMMPGQSPVLRIIVENLYYPVSLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPM 201
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ G C L + +S+ T L++K NND+SRD+T P + QP++
Sbjct: 202 NAHHAKVALDGQNIYN-GCCTLRVEFSKLTSLNVKYNNDKSRDFTRLDLPSGDGQPTL 258
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 53/86 (61%), Gaps = 7/86 (8%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I G CTLR+
Sbjct: 172 IFSKFGTVLKIITFTKNNQFQALLQYADPMNAHHAKVALDGQNIYN-------GCCTLRV 224
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLP 111
+S T L+VK+ + +SRD+T LP
Sbjct: 225 EFSKLTSLNVKYNNDKSRDFTRLDLP 250
>gi|328712480|ref|XP_003244821.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 3
[Acyrthosiphon pisum]
Length = 632
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VL +E+M + ++LDVL+ +FS +G V KI F KN Q LIQYPDV TA AK +
Sbjct: 193 NTVLRVIVEHMVFPISLDVLYEIFSRYGKVLKIVTFTKNNSFQVLIQYPDVVTAQSAKLS 252
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
L+G IY CKL I YS+ + L++K NND+SRDYT P+ P
Sbjct: 253 LDGQNIYT-SCCKLRIEYSKLSSLNVKYNNDKSRDYTNPTLP 293
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 55/93 (59%), Gaps = 7/93 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS +G V KI TF K FQ L+Q+ D TA SAK +LDG++I C LR
Sbjct: 214 EIFSRYGKVLKIVTFTKNNSFQVLIQYPDVVTAQSAKLSLDGQNI-------YTSCCKLR 266
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAI 117
I YS + L+VK+ + +SRDYTNP LP + +
Sbjct: 267 IEYSKLSSLNVKYNNDKSRDYTNPTLPNGDNTV 299
>gi|413933763|gb|AFW68314.1| hypothetical protein ZEAMMB73_143783 [Zea mays]
Length = 445
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 83/146 (56%), Gaps = 2/146 (1%)
Query: 107 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
N Y+ + + Q S G + + + +LL +I +M Y +T++VLH VF A+G V+
Sbjct: 72 NVYMQFSSHQELTTDQSSHGRNSDQESEPNRILLVTIHHMIYPITVEVLHQVFKAYGFVE 131
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
KI F K+ G QALIQ+ Q AV A +L G IYDG C+L I YS ++L + NND
Sbjct: 132 KIVTFQKSAGFQALIQFHSRQEAVEAFGSLHGRNIYDGC-CQLDIQYSNLSELQVHYNND 190
Query: 227 RSRDYTLPSTPMVNSQPSILGQQPVP 252
RSRD+T PS P +P QQ P
Sbjct: 191 RSRDFTNPSLP-TEQRPRASQQQAYP 215
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 107/229 (46%), Gaps = 49/229 (21%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VF A+GFV KI TF+K+AGFQAL+QF + A A +L GR+I G C L I
Sbjct: 123 VFKAYGFVEKIVTFQKSAGFQALIQFHSRQEAVEAFGSLHGRNIYD-------GCCQLDI 175
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPV--------------------------------- 112
YS ++L V + + RSRD+TNP LP
Sbjct: 176 QYSNLSELQVHYNNDRSRDFTNPSLPTEQRPRASQQQAYPDPANLYAFQQAGASYAQMGR 235
Query: 113 -APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMF 171
A A G L G+ G ++++++ N + + D L +FS +G + +I +
Sbjct: 236 AAMIAAAFGGTLPHGVTGTN--ERCTLIVSNLNNDK--IDEDKLFNLFSLYGNIVRIKVL 291
Query: 172 DKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 220
+N AL++ D A +A L+G ++ KL ++YS++ +++
Sbjct: 292 -RNKPDHALVEMADGLQAELAVHYLKGAILFGK---KLEVNYSKYPNIT 336
>gi|281210224|gb|EFA84392.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 468
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 76/125 (60%), Gaps = 5/125 (4%)
Query: 132 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
+E +N+LL +I N+ Y VT+DVL+ +FS +G V KI +F K+G Q+LIQ +A+
Sbjct: 132 VETPNNILLVTISNIIYPVTIDVLYQLFSKYGSVLKILIFSKSGNFQSLIQLHTTDSAIN 191
Query: 192 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT----LPSTPMVNSQPSILG 247
AK L+G IY+G C L I YS +L IK NND+SRD+T LP T + S P G
Sbjct: 192 AKRELDGQNIYNGC-CTLKIQYSSLNNLRIKYNNDKSRDFTNPTLLPGTTSLLSNPIGFG 250
Query: 248 QQPVP 252
P P
Sbjct: 251 ISPAP 255
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 54/86 (62%), Gaps = 7/86 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS +G V KI F K+ FQ+L+Q T++A +AK LDG++I G CTL+
Sbjct: 157 QLFSKYGSVLKILIFSKSGNFQSLIQLHTTDSAINAKRELDGQNIYN-------GCCTLK 209
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYL 110
I YS+ +L +K+ + +SRD+TNP L
Sbjct: 210 IQYSSLNNLRIKYNNDKSRDFTNPTL 235
>gi|344271491|ref|XP_003407571.1| PREDICTED: regulator of differentiation 1 [Loxodonta africana]
Length = 581
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 200 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 259
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A A+ AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 260 NAHYARMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 316
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A A+ ALDG++I CTLR
Sbjct: 229 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYARMALDGQNIYNAC-------CTLR 281
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 113
I +S T L+VK+ + +SRD+T LP
Sbjct: 282 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 310
>gi|359493143|ref|XP_002264763.2| PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform 2
[Vitis vinifera]
Length = 432
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 111/213 (52%), Gaps = 38/213 (17%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F FG + K+ A QAL+Q D +A++A N+ P ++R
Sbjct: 24 QLFQPFGVITKLVMLR--AKNQALLQMQDVPSAANAMQ-----------FYTNVQP-SIR 69
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIE 144
++ V+F SH+ + +D + Q G+ EP + +LL +I
Sbjct: 70 -----GRNVYVQFSSHQE-----------LTTVDQNAQ------GRGDEP-NRILLVTIH 106
Query: 145 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 204
++ Y +T++VLH VFS G V+KI F K+ G QALIQY Q+AV A+ +L+G IYDG
Sbjct: 107 HLLYPITVEVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARNSLQGRNIYDG 166
Query: 205 GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
C+L I +S +L + NN+RSRD+T PS P
Sbjct: 167 C-CQLDIQFSNLDELQVNYNNERSRDFTNPSLP 198
>gi|195055925|ref|XP_001994863.1| GH17472 [Drosophila grimshawi]
gi|193892626|gb|EDV91492.1| GH17472 [Drosophila grimshawi]
Length = 920
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VL +E + Y V+LD+LH +F FG V KI F KN QALIQYPD +A AK
Sbjct: 538 NTVLRVIVETLMYPVSLDILHQIFQRFGKVLKIVTFTKNNSFQALIQYPDAHSAQQAKSI 597
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
L+G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 598 LDGQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 638
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F FG V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 559 QIFQRFGKVLKIVTFTKNNSFQALIQYPDAHSAQQAKSILDGQNIYN-------GCCTLR 611
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 118
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 612 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 645
>gi|195391604|ref|XP_002054450.1| GJ22800 [Drosophila virilis]
gi|194152536|gb|EDW67970.1| GJ22800 [Drosophila virilis]
Length = 818
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL +E + Y V+LD+LH +F FG V KI F KN QALIQYPD +A AK L+
Sbjct: 434 VLRVIVETLMYPVSLDILHQIFQRFGKVLKIVTFTKNNSFQALIQYPDAHSAQQAKSILD 493
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 494 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 532
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F FG V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 453 QIFQRFGKVLKIVTFTKNNSFQALIQYPDAHSAQQAKSILDGQNIYN-------GCCTLR 505
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 118
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 506 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 539
>gi|356535770|ref|XP_003536416.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Glycine max]
Length = 443
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 105/217 (48%), Gaps = 47/217 (21%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC--- 81
+F FG + K+ A QAL+Q D SA NAL N+ P
Sbjct: 24 QLFQPFGVITKLVMLR--AKNQALIQMQD---VPSAVNALQ--------FYANVQPSIRG 70
Query: 82 -TLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLL 140
+ + +S+H +L+ QS G+ EP + +LL
Sbjct: 71 RNVYVQFSSHQELTTMDQSQ----------------------------GRGDEP-NRILL 101
Query: 141 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 200
++ +M Y +T+DVL+ VFS G V+KI F K+ G QALIQY Q+AV A+ L+G
Sbjct: 102 VTVHHMLYPMTVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQYQSRQSAVAARSTLQGRN 161
Query: 201 IYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
IYDG C+L I +S +L + NNDRSRD+T P+ P
Sbjct: 162 IYDGC-CQLDIQFSNLDELQVNYNNDRSRDFTNPNLP 197
>gi|195110769|ref|XP_001999952.1| GI22798 [Drosophila mojavensis]
gi|193916546|gb|EDW15413.1| GI22798 [Drosophila mojavensis]
Length = 834
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL +E + Y V+LD+LH +F FG V KI F KN QALIQYPD +A AK L+
Sbjct: 450 VLRVIVETLMYPVSLDILHQIFQRFGKVLKIVTFTKNNSFQALIQYPDAHSAQQAKSILD 509
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 510 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 548
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F FG V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 469 QIFQRFGKVLKIVTFTKNNSFQALIQYPDAHSAQQAKSILDGQNIYN-------GCCTLR 521
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 118
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 522 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 555
>gi|147856398|emb|CAN82466.1| hypothetical protein VITISV_002663 [Vitis vinifera]
Length = 476
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 104/208 (50%), Gaps = 34/208 (16%)
Query: 30 FGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSA 89
FG V K+ A QAL+Q D +A SA + Y N+ P
Sbjct: 29 FGVVTKLVMLR--AKNQALLQMQDVASAVSA--------LQYY---ANVQPSV------R 69
Query: 90 HTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYA 149
++ V+F SH+ + Q S G G + + +LL +I ++ Y
Sbjct: 70 GRNVYVQFSSHQE--------------LTTMDQNSQGRKGDQDAQPNRILLVTIHHLLYP 115
Query: 150 VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKL 209
+T++VLH VFS G V+KI F K+ G QALIQY Q+AV A AL+G IYD G C+L
Sbjct: 116 ITVEVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSAINALQGRNIYD-GCCQL 174
Query: 210 HISYSRHTDLSIKVNNDRSRDYTLPSTP 237
I +S T+L + NN+RSRD+T PS P
Sbjct: 175 DIQFSNLTELQVNYNNERSRDFTNPSLP 202
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 56/87 (64%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
VFS GFV KI TF+K+AGFQAL+Q+ ++A SA NAL GR+I G C L
Sbjct: 123 QVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSAINALQGRNIYD-------GCCQLD 175
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T+L V + + RSRD+TNP LP
Sbjct: 176 IQFSNLTELQVNYNNERSRDFTNPSLP 202
>gi|432091564|gb|ELK24589.1| Regulator of differentiation 1 [Myotis davidii]
Length = 524
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 93/197 (47%), Gaps = 34/197 (17%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 143 EGTMLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPL 202
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 247
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + PS+
Sbjct: 203 NAQYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGHPSL-- 259
Query: 248 QQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGS 307
E PM AA +GA P S P G + P
Sbjct: 260 ------------------------ESPM-----AAAFGA--PGIISSPYAGAAGFAPAIG 288
Query: 308 MPMGPGMMQMHMPGQSG 324
P G+ +PG G
Sbjct: 289 FPQATGLSVPGVPGALG 305
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 172 QIFSKFGTVLKIITFTKNNQFQALLQYADPLNAQYAKMALDGQNIYN-------ACCTLR 224
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 113
I +S T L+VK+ + +SRD+T LP
Sbjct: 225 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 253
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 79/193 (40%), Gaps = 20/193 (10%)
Query: 26 VFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G VH++ F K ALVQ +D A A N L+G+ + +L R
Sbjct: 350 LFGVYGDVHRVKIMFNKKE--NALVQMADANQAQLAMNHLNGQRLYGKVL---------R 398
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIE 144
T S H + + + + T + G + + + P S L +
Sbjct: 399 ATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL--HLS 452
Query: 145 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 204
N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H + G
Sbjct: 453 NIPPSVTMDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDL--G 510
Query: 205 GFCKLHISYSRHT 217
L +S+S+ T
Sbjct: 511 ENHHLRVSFSKST 523
>gi|300681488|emb|CBH32582.1| RNA recognition domain containing protein,expressed [Triticum
aestivum]
Length = 439
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 90/162 (55%), Gaps = 12/162 (7%)
Query: 107 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
N YL + + Q S G + + EP + +LL ++ +M Y +T++VLH VFS +G V+
Sbjct: 72 NVYLQYSSHQELTTDQSSHGRNPDQDEP-NRILLVTVHHMLYPMTVEVLHQVFSPYGFVE 130
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
KI F K G QALIQ+ Q+A+ A AL G IYDG C+L I YS ++L + NND
Sbjct: 131 KIVTFQKTAGFQALIQFQSRQSAIQAAGALHGRNIYDGC-CQLDIQYSNLSELQVHYNND 189
Query: 227 RSRDYTLPSTPMVN---------SQPSILG-QQPVPMVGATA 258
RSRD+T PS P + PS+ G QQP G A
Sbjct: 190 RSRDFTNPSLPTEQRPRSSQLGYNDPSLFGFQQPGAAYGQAA 231
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 104/217 (47%), Gaps = 38/217 (17%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFS +GFV KI TF+KTAGFQAL+QF ++A A AL GR+I G C L I
Sbjct: 122 VFSPYGFVEKIVTFQKTAGFQALIQFQSRQSAIQAAGALHGRNIYD-------GCCQLDI 174
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVA------------PSAID------ASGQLSV-- 125
YS ++L V + + RSRD+TNP LP PS A GQ +V
Sbjct: 175 QYSNLSELQVHYNNDRSRDFTNPSLPTEQRPRSSQLGYNDPSLFGFQQPGAAYGQAAVIA 234
Query: 126 GLDGKKLEP------ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQA 179
G L P + L+ S N + D L +FS +G + +I + +N A
Sbjct: 235 AAFGGTLPPGVTGTNDRCTLIVSNLNSD-KIDADKLFNLFSIYGNIVRIKVL-RNKPDHA 292
Query: 180 LIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 216
L+Q D A +A L+G + KL +++S++
Sbjct: 293 LVQMADGLQAELAIHYLKGAMLLGQ---KLEVNFSKY 326
>gi|444730196|gb|ELW70586.1| Regulator of differentiation 1 [Tupaia chinensis]
Length = 386
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 139 EGPVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 198
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 199 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 255
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 100/227 (44%), Gaps = 43/227 (18%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 168 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 220
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPV------------------APSAIDASGQLSV- 125
I +S T L+VK+ + +SRD+T LP P+ A G L++
Sbjct: 221 IDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSLESPMAAAFGLSVPTVPGALGPLAIT 280
Query: 126 --------GLDGKKLEPESNVLLASIENMQ-------YAVTLDVLHMVFSAFGPVQKIAM 170
+ G P ++VLL + N + + +D L +F G K
Sbjct: 281 SSAVTGRMAIPGASGIPGNSVLLVTNLNPDLITPHGLFILFVDDLKNLFIEAGCSVKAFK 340
Query: 171 FDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHT 217
F + ALIQ V+ A+ A L H + G L +S+S+ T
Sbjct: 341 FFQKDRKMALIQLGSVEEAIQALIELHNHDL--GENHHLRVSFSKST 385
>gi|417411514|gb|JAA52191.1| Putative polypyrimidine tract-binding protein, partial [Desmodus
rotundus]
Length = 541
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 72/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 160 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPL 219
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + PS+
Sbjct: 220 NAQYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGHPSL 276
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 189 QIFSKFGTVLKIITFTKNNQFQALLQYADPLNAQYAKMALDGQNIYN-------ACCTLR 241
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA 113
I +S T L+VK+ + +SRD+T LP
Sbjct: 242 IDFSKLTSLNVKYNNDKSRDFTRLDLPTG 270
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 78/193 (40%), Gaps = 20/193 (10%)
Query: 26 VFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G VH++ F K ALVQ +D A A N L G+ + +L R
Sbjct: 367 LFGVYGDVHRVKIMFNKKE--NALVQMADANQAQLAMNHLSGQRLYGKVL---------R 415
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIE 144
T S H + + + + T + G + + + P S L +
Sbjct: 416 ATLSKHQTVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL--HLS 469
Query: 145 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 204
N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H + G
Sbjct: 470 NIPPSVTMDDLKNLFTEAGCTVKAFKFFQKDRKMALIQLESVEEAIQALIELHNHDL--G 527
Query: 205 GFCKLHISYSRHT 217
L +S+S+ T
Sbjct: 528 ENHHLRVSFSKST 540
>gi|359480737|ref|XP_003632518.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 2 [Vitis vinifera]
Length = 412
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 74/116 (63%), Gaps = 1/116 (0%)
Query: 122 QLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALI 181
Q S G G + + +LL +I ++ Y +T++VLH VFS G V+KI F K+ G QALI
Sbjct: 52 QNSQGRKGDQDAQPNRILLVTIHHLLYPITVEVLHQVFSPHGFVEKIVTFQKSAGFQALI 111
Query: 182 QYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
QY Q+AV A AL+G IYD G C+L I +S T+L + NN+RSRD+T PS P
Sbjct: 112 QYQSRQSAVSAINALQGRNIYD-GCCQLDIQFSNLTELQVNYNNERSRDFTNPSLP 166
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 56/87 (64%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
VFS GFV KI TF+K+AGFQAL+Q+ ++A SA NAL GR+I G C L
Sbjct: 87 QVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSAINALQGRNIYD-------GCCQLD 139
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T+L V + + RSRD+TNP LP
Sbjct: 140 IQFSNLTELQVNYNNERSRDFTNPSLP 166
>gi|348540154|ref|XP_003457553.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Oreochromis
niloticus]
Length = 511
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL I+NM Y VTLDVL +FS FG V KI F KN QAL+Q+ D +A AK AL+
Sbjct: 167 VLRIIIDNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVSAQQAKLALD 226
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPS 244
G IY+ C L I +S+ +L++K NND+SRDYT P P + QPS
Sbjct: 227 GQNIYNSC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPS 272
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 107/226 (47%), Gaps = 43/226 (19%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+QFSD +A AK ALDG++I CTLR
Sbjct: 186 QIFSKFGTVMKIITFTKNNQFQALLQFSDPVSAQQAKLALDGQNIYN-------SCCTLR 238
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA---PS---------AIDASGQL--------- 123
I +S +L+VK+ + +SRDYT P LP PS + D+S L
Sbjct: 239 IDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPSFDPTVAVAFSKDSSSLLGALNPLSAA 298
Query: 124 --------SVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 175
V L G+ S VLL S N + VT L +F +G VQ++ + N
Sbjct: 299 AAAAAAAGRVALTGQT--GSSGVLLVSNLN-EEMVTPQSLFTLFGVYGDVQRVKIL-YNK 354
Query: 176 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
ALIQ + A +A L G +Y G + ++ S+H +++
Sbjct: 355 KDSALIQMSESNQAQLAMSHLNGQKMY-GKIIR--VTLSKHQTVAL 397
>gi|57004|emb|CAA43203.1| pyrimidine binding protein 2 [Rattus norvegicus]
Length = 367
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 145 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 204
N+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +A AK +L+G IY+
Sbjct: 1 NLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN- 59
Query: 205 GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 60 ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 100
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 55/90 (61%), Gaps = 7/90 (7%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLRI
Sbjct: 14 IFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLRI 66
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
+S T L+VK+ + +SRDYT P LP S
Sbjct: 67 DFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 96
>gi|67678144|gb|AAH97557.1| VgRBP60 protein [Xenopus laevis]
Length = 472
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 73/117 (62%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVL +FS FG V KI F KN QAL+QY D +
Sbjct: 177 GIAMSGQSPVLRIIVENLFYPVTLDVLQQIFSKFGTVLKIITFTKNNQFQALLQYGDPVS 236
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P + QPS+
Sbjct: 237 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDGQPSL 292
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D +A AK +LDG++I CTLR
Sbjct: 205 QIFSKFGTVLKIITFTKNNQFQALLQYGDPVSAQHAKLSLDGQNIYN-------ACCTLR 257
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRDYT P LP
Sbjct: 258 IDFSKLTSLNVKYNNDKSRDYTRPDLP 284
>gi|357443611|ref|XP_003592083.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355481131|gb|AES62334.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 407
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 92/166 (55%), Gaps = 12/166 (7%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G+ EP + +LL +I ++ Y +T+DVL+ VFS G V+KI F K+ G QALIQY Q+
Sbjct: 55 GRGDEP-NRILLVTIHHVLYPITVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQYQSQQS 113
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
++ A+ AL+G IYD G C+L I +S +L + NNDRSRD+T P+ P G+
Sbjct: 114 SITARTALQGRNIYD-GCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLPTEQK-----GR 167
Query: 249 QPVPMVGATANQYNGAQFAPPP----PEQPMMHQPTAAGWGAVPPA 290
P G N Y G Q + P P+ P AA G +PP
Sbjct: 168 PPQLGYGDAGNMY-GVQGSGPRTVGYPQMPNAAAIAAAFGGGLPPG 212
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 107/229 (46%), Gaps = 45/229 (19%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
VFS G V KI TF+K+AGFQAL+Q+ +++ +A+ AL GR+I G C L
Sbjct: 82 QVFSPHGSVEKIVTFQKSAGFQALIQYQSQQSSITARTALQGRNIYD-------GCCQLD 134
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS---------------AIDASGQLSVGL-- 127
I +S +L V + + RSRD+TNP LP + SG +VG
Sbjct: 135 IQFSNLDELQVNYNNDRSRDFTNPNLPTEQKGRPPQLGYGDAGNMYGVQGSGPRTVGYPQ 194
Query: 128 ----------DGKKLEP------ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMF 171
G L P + LL S N + D L +FS +G + +I +
Sbjct: 195 MPNAAAIAAAFGGGLPPGITGTNDRCTLLVSNLNPD-RIDEDKLFNLFSLYGNIVRIKLL 253
Query: 172 DKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 220
+N ALIQ D A +A L+G ++D +L +++S+H +++
Sbjct: 254 -RNKPDHALIQMGDGFQAELAVHFLKGAMLFDK---RLEVNFSKHPNIT 298
>gi|308509766|ref|XP_003117066.1| CRE-PTB-1 protein [Caenorhabditis remanei]
gi|308241980|gb|EFO85932.1| CRE-PTB-1 protein [Caenorhabditis remanei]
Length = 436
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 80/127 (62%), Gaps = 4/127 (3%)
Query: 113 APSAID--ASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM 170
AP+ D A+G +S G + +P S VL IENM + V+L+VLH +F+ FG V +I
Sbjct: 25 APANTDSVANGSVSNFEVGTQQQPNS-VLRTIIENMMFPVSLEVLHQLFARFGKVLRIIT 83
Query: 171 FDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRD 230
F KN QAL+Q + +A +AK+ LE +Y+G C L I YS+ + L++K NND+SRD
Sbjct: 84 FSKNNTFQALVQMSEANSAQLAKQGLENQNVYNGC-CTLRIDYSKLSTLNVKYNNDKSRD 142
Query: 231 YTLPSTP 237
YT P+ P
Sbjct: 143 YTNPNLP 149
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 58/100 (58%), Gaps = 7/100 (7%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+F+ FG V +I TF K FQALVQ S+ +A AK L+ +++ G CTLRI
Sbjct: 71 LFARFGKVLRIITFSKNNTFQALVQMSEANSAQLAKQGLENQNVYN-------GCCTLRI 123
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSV 125
YS + L+VK+ + +SRDYTNP LP I+ + +S
Sbjct: 124 DYSKLSTLNVKYNNDKSRDYTNPNLPAGEMTIEQTLAMST 163
>gi|431918462|gb|ELK17686.1| Regulator of differentiation 1 [Pteropus alecto]
Length = 523
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 72/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 142 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPL 201
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + PS+
Sbjct: 202 NAQYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGHPSL 258
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 171 QIFSKFGTVLKIITFTKNNQFQALLQYADPLNAQYAKMALDGQNIYN-------ACCTLR 223
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRD+T LP
Sbjct: 224 IDFSKLTSLNVKYNNDKSRDFTRLDLP 250
>gi|195354540|ref|XP_002043755.1| GM16408 [Drosophila sechellia]
gi|194128955|gb|EDW50998.1| GM16408 [Drosophila sechellia]
Length = 792
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 74/123 (60%), Gaps = 9/123 (7%)
Query: 115 SAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN 174
SA++A G + G + VL +E++ Y V+LDVLH +F +G V KI F KN
Sbjct: 393 SAVNAGGNAAGG--------PNTVLRVIVESLMYPVSLDVLHQIFQRYGKVLKIVTFTKN 444
Query: 175 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 234
QALIQYPD +A AK L+G IY+ G C L I S+ T L++K NND+SRD+T P
Sbjct: 445 NSFQALIQYPDANSAQHAKSLLDGQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNP 503
Query: 235 STP 237
+ P
Sbjct: 504 ALP 506
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 427 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 479
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 118
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 480 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 513
>gi|293335109|ref|NP_001169809.1| uncharacterized protein LOC100383701 [Zea mays]
gi|224031787|gb|ACN34969.1| unknown [Zea mays]
Length = 397
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
Query: 107 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
N Y+ + + Q S G + + + +LL +I +M Y +T++VLH VF A+G V+
Sbjct: 25 NVYMQFSSHQELTTDQSSHGRNSDQESEPNRILLVTIHHMIYPITVEVLHQVFKAYGFVE 84
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
KI F K+ G QALIQ+ Q AV A +L G IYDG C+L I YS ++L + NND
Sbjct: 85 KIVTFQKSAGFQALIQFHSRQEAVEAFGSLHGRNIYDGC-CQLDIQYSNLSELQVHYNND 143
Query: 227 RSRDYTLPSTP 237
RSRD+T PS P
Sbjct: 144 RSRDFTNPSLP 154
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 107/228 (46%), Gaps = 48/228 (21%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VF A+GFV KI TF+K+AGFQAL+QF + A A +L GR+I G C L I
Sbjct: 76 VFKAYGFVEKIVTFQKSAGFQALIQFHSRQEAVEAFGSLHGRNIYD-------GCCQLDI 128
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPV--------------------------------- 112
YS ++L V + + RSRD+TNP LP
Sbjct: 129 QYSNLSELQVHYNNDRSRDFTNPSLPTEQRPRASQQAYPDPANLYAFQQAGASYAQMGRA 188
Query: 113 APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD 172
A A G L G+ G ++++++ N + + D L +FS +G + +I +
Sbjct: 189 AMIAAAFGGTLPHGVTGTN--ERCTLIVSNLNNDK--IDEDKLFNLFSLYGNIVRIKVL- 243
Query: 173 KNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 220
+N AL++ D A +A L+G ++ KL ++YS++ +++
Sbjct: 244 RNKPDHALVEMADGLQAELAVHYLKGAILFGK---KLEVNYSKYPNIT 288
>gi|293335567|ref|NP_001169470.1| uncharacterized protein LOC100383343 [Zea mays]
gi|224029557|gb|ACN33854.1| unknown [Zea mays]
Length = 444
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
Query: 107 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
N Y+ + + Q S G + + + +LL +I +M Y +T+++LH VF A+G V+
Sbjct: 72 NVYMQFSSHQELTTDQSSHGRNSDQGSEPNRILLVTIHHMIYPITVEILHQVFKAYGFVE 131
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
KI F K+ G QALIQY Q AV A +L G IYDG C+L I YS ++L + NND
Sbjct: 132 KIVTFQKSAGFQALIQYHSRQEAVEAFGSLHGRNIYDGC-CQLDIQYSNLSELQVHYNND 190
Query: 227 RSRDYTLPSTP 237
RSRD+T PS P
Sbjct: 191 RSRDFTNPSLP 201
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 105/228 (46%), Gaps = 48/228 (21%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VF A+GFV KI TF+K+AGFQAL+Q+ + A A +L GR+I G C L I
Sbjct: 123 VFKAYGFVEKIVTFQKSAGFQALIQYHSRQEAVEAFGSLHGRNIYD-------GCCQLDI 175
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLP---------------------------------V 112
YS ++L V + + RSRD+TNP LP V
Sbjct: 176 QYSNLSELQVHYNNDRSRDFTNPSLPTEQRPRASQQGYLDPANLYAFQQAGASYAQMGRV 235
Query: 113 APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD 172
A A G L G+ G E L+ S N + D L +FS +G + +I +
Sbjct: 236 AMIAAAFGGTLPHGVTGTN---ERCTLIVSNLNTD-KIDEDKLFNLFSLYGNIVRIKIL- 290
Query: 173 KNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 220
+N AL++ D A +A L+G ++ KL ++YS++ +++
Sbjct: 291 RNKPDHALVEMADGLQAELAVHYLKGSILFGK---KLEVNYSKYPNIT 335
>gi|348556107|ref|XP_003463864.1| PREDICTED: regulator of differentiation 1-like [Cavia porcellus]
Length = 688
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 70/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 314 QSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKM 373
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 374 ALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPSGDGQPSL 423
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 97/232 (41%), Gaps = 64/232 (27%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 336 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYNAC-------CTLR 388
Query: 85 ITYSAHTDLSVKFQSHRSRDYT----------------------------NPY------- 109
I +S T L+VK+ + +SRD+T +PY
Sbjct: 389 IDFSKLTSLNVKYNNDKSRDFTRLDLPSGDGQPSLEPPMAAAFGAPGIISSPYAGAAGFA 448
Query: 110 ------------LPVAPSAIDASGQLSVGLDGKKLEPES------NVLLASIENMQYAVT 151
+P P A+ S + G+ P + +VLL + N +T
Sbjct: 449 PAIGFPQATGLSVPAVPGALGPLALTSSAITGRMAIPGASGIPGNSVLLVTNLNPDL-IT 507
Query: 152 LDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 202
L ++F +G V ++ MF+K AL+Q D A +A L G +Y
Sbjct: 508 PHGLFILFGVYGDVHRVKIMFNKKE--NALVQMADANQAQLAMNHLSGQRLY 557
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 78/193 (40%), Gaps = 20/193 (10%)
Query: 26 VFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G VH++ F K ALVQ +D A A N L G+ + +L R
Sbjct: 514 LFGVYGDVHRVKIMFNKKE--NALVQMADANQAQLAMNHLSGQRLYGKVL---------R 562
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIE 144
T S H + + + + T + G + + + P S L +
Sbjct: 563 ATLSKHQTVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL--HLS 616
Query: 145 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 204
N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H + G
Sbjct: 617 NIPPSVTMDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDL--G 674
Query: 205 GFCKLHISYSRHT 217
L +S+S+ T
Sbjct: 675 ENHHLRVSFSKST 687
>gi|195575404|ref|XP_002105669.1| GD16206 [Drosophila simulans]
gi|194201596|gb|EDX15172.1| GD16206 [Drosophila simulans]
Length = 792
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 74/123 (60%), Gaps = 9/123 (7%)
Query: 115 SAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN 174
SA++A G + G + VL +E++ Y V+LDVLH +F +G V KI F KN
Sbjct: 393 SAVNAGGNAAGG--------PNTVLRVIVESLMYPVSLDVLHQIFQRYGKVLKIVTFTKN 444
Query: 175 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 234
QALIQYPD +A AK L+G IY+ G C L I S+ T L++K NND+SRD+T P
Sbjct: 445 NSFQALIQYPDANSAQHAKSLLDGQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNP 503
Query: 235 STP 237
+ P
Sbjct: 504 ALP 506
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 427 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 479
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 118
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 480 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 513
>gi|432964272|ref|XP_004086906.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Oryzias
latipes]
Length = 541
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 85/161 (52%), Gaps = 9/161 (5%)
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIE 144
+ +S H +L S R++ V P + L+ S VL I+
Sbjct: 148 VQFSNHKELKTDAASQRTQAVLQAVSAVQPPGSEVQDVLAAA--------SSPVLRIIID 199
Query: 145 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 204
NM Y VTLDVL +FS FG V KI F KN QAL+QY D A AK AL+G IY+
Sbjct: 200 NMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQYSDPVQAQHAKLALDGQNIYN- 258
Query: 205 GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
C L I +S+ +L++K NND+SRDY+ P P +S+P++
Sbjct: 259 SCCTLRIDFSKLVNLNVKYNNDKSRDYSRPELPAGDSRPTL 299
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 105/228 (46%), Gaps = 43/228 (18%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+SD A AK ALDG++I CTLR
Sbjct: 212 QIFSKFGTVMKIITFTKNNQFQALLQYSDPVQAQHAKLALDGQNIYN-------SCCTLR 264
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGK--------KLEP 134
I +S +L+VK+ + +SRDY+ P LP S +D S ++ D L P
Sbjct: 265 IDFSKLVNLNVKYNNDKSRDYSRPELPAGDSRPTLDPSVAAALSKDSTPLLCKIPGALNP 324
Query: 135 ES---------------------NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDK 173
S VLLAS N + VT L +F +G VQ++ +
Sbjct: 325 LSAAAAAAAAAGRVALPGQAGSGGVLLASNLN-EEMVTPQSLFTLFGVYGDVQRVKIL-Y 382
Query: 174 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
N ALIQ D A +A L G +Y G + ++ S+H +++
Sbjct: 383 NKKDSALIQMCDPSQAQLAMSHLNGQKMY-GKIIR--VTLSKHQSVAL 427
>gi|242090663|ref|XP_002441164.1| hypothetical protein SORBIDRAFT_09g021560 [Sorghum bicolor]
gi|241946449|gb|EES19594.1| hypothetical protein SORBIDRAFT_09g021560 [Sorghum bicolor]
Length = 444
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 106/216 (49%), Gaps = 51/216 (23%)
Query: 30 FGFVHKITTFEKTAGFQALVQFSDTETASSAKN-------ALDGRSIPRYLLPENMGPCT 82
FG V KI A QAL+Q D + SA ++ GR++
Sbjct: 29 FGVVSKIVMLR--AKNQALLQMEDIHASVSALQYYTSVQPSIRGRNV------------- 73
Query: 83 LRITYSAHTDLSVKFQSH-RSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLA 141
+ +S+H +L+ SH R+ D ++ EP + +LL
Sbjct: 74 -YMQFSSHQELTTDQSSHGRNSD-------------------------QESEP-NRILLV 106
Query: 142 SIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCI 201
+I +M Y +T++VLH VF A+G V+KI F K+ G QALIQ+ Q AV A +L G I
Sbjct: 107 TIHHMIYPITVEVLHQVFKAYGFVEKIVTFQKSAGFQALIQFHSRQEAVEAFGSLHGRNI 166
Query: 202 YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
YDG C+L I YS ++L + NNDRSRD+T PS P
Sbjct: 167 YDGC-CQLDIQYSNLSELQVHYNNDRSRDFTNPSLP 201
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 104/228 (45%), Gaps = 48/228 (21%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VF A+GFV KI TF+K+AGFQAL+QF + A A +L GR+I G C L I
Sbjct: 123 VFKAYGFVEKIVTFQKSAGFQALIQFHSRQEAVEAFGSLHGRNIYD-------GCCQLDI 175
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPV--------------------------------- 112
YS ++L V + + RSRD+TNP LP
Sbjct: 176 QYSNLSELQVHYNNDRSRDFTNPSLPTEQRPRAPQQGYPDPANLYAFQQAGASFAQMGRA 235
Query: 113 APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD 172
A A G L G+ G E L+ S N + D L +FS +G + +I +
Sbjct: 236 AMIAAAFGGSLPHGVTGAN---ERCTLIVSNLNTD-KIDEDKLFNLFSLYGNIVRIKIL- 290
Query: 173 KNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 220
+N AL++ D A +A L+G ++ KL ++YS++ +++
Sbjct: 291 RNKPDHALVEMADGLQAELAVHYLKGAILFGK---KLEVNYSKYPNIT 335
>gi|413949171|gb|AFW81820.1| hypothetical protein ZEAMMB73_476847 [Zea mays]
Length = 529
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 102/215 (47%), Gaps = 49/215 (22%)
Query: 30 FGFVHKITTFEKTAGFQALVQFSDTETASSAKN-------ALDGRSIPRYLLPENMGPCT 82
FG V KI A QAL+Q D + SA ++ GR++
Sbjct: 114 FGMVSKIVMLR--AKNQALLQMEDLHASVSALQYYTSVQPSIRGRNV------------- 158
Query: 83 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 142
+ +S+H +L+ SH G + + + +LL +
Sbjct: 159 -YMQFSSHQELTTDQSSH-------------------------GRNSDQGSEPNRILLVT 192
Query: 143 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 202
I +M Y +T+++LH VF A+G V+KI F K+ G QALIQY Q AV A +L G IY
Sbjct: 193 IHHMIYPITVEILHQVFKAYGFVEKIVTFQKSAGFQALIQYHSRQEAVEAFGSLHGRNIY 252
Query: 203 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
DG C+L I YS ++L + NNDRSRD+T PS P
Sbjct: 253 DGC-CQLDIQYSNLSELQVHYNNDRSRDFTNPSLP 286
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 105/228 (46%), Gaps = 48/228 (21%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VF A+GFV KI TF+K+AGFQAL+Q+ + A A +L GR+I G C L I
Sbjct: 208 VFKAYGFVEKIVTFQKSAGFQALIQYHSRQEAVEAFGSLHGRNIYD-------GCCQLDI 260
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLP---------------------------------V 112
YS ++L V + + RSRD+TNP LP V
Sbjct: 261 QYSNLSELQVHYNNDRSRDFTNPSLPTEQRPRASQQGYLDPANLYAFQQAGASYAQMGRV 320
Query: 113 APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD 172
A A G L G+ G E L+ S N + D L +FS +G + +I +
Sbjct: 321 AMIAAAFGGTLPHGVTGTN---ERCTLIVSNLNTD-KIDEDKLFNLFSLYGNIVRIKIL- 375
Query: 173 KNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 220
+N AL++ D A +A L+G ++ KL ++YS++ +++
Sbjct: 376 RNKPDHALVEMADGLQAELAVHYLKGSILFGK---KLEVNYSKYPNIT 420
>gi|413945516|gb|AFW78165.1| hypothetical protein ZEAMMB73_011466 [Zea mays]
Length = 444
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
Query: 107 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
N Y+ + + Q S G + + + +LL +I +M Y +T++VLH VF A+G V+
Sbjct: 72 NVYMQFSSHQELTTDQSSHGRNSDQESEPNRILLVTIHHMIYPITVEVLHQVFKAYGFVE 131
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
KI F K+ G QALIQ+ Q AV A +L G IYDG C+L I YS ++L + NND
Sbjct: 132 KIVTFQKSAGFQALIQFHSRQEAVEAFGSLHGRNIYDGC-CQLDIQYSNLSELQVHYNND 190
Query: 227 RSRDYTLPSTP 237
RSRD+T PS P
Sbjct: 191 RSRDFTNPSLP 201
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 107/228 (46%), Gaps = 48/228 (21%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VF A+GFV KI TF+K+AGFQAL+QF + A A +L GR+I G C L I
Sbjct: 123 VFKAYGFVEKIVTFQKSAGFQALIQFHSRQEAVEAFGSLHGRNIYD-------GCCQLDI 175
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPV--------------------------------- 112
YS ++L V + + RSRD+TNP LP
Sbjct: 176 QYSNLSELQVHYNNDRSRDFTNPSLPTEQRPRASQQAYPDPANLYAFQQAGGSIYQMGRA 235
Query: 113 APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD 172
A A G L G+ G ++++++ N + + D L +FS +G + +I +
Sbjct: 236 AMIAAAFGGTLPHGVTGTN--ERCTLIVSNLNNDK--IDEDKLFNLFSLYGNIVRIKVL- 290
Query: 173 KNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 220
+N AL++ D A +A L+G ++ KL ++YS++ +++
Sbjct: 291 RNKPDHALVEMADGLQAELAVHYLKGAILFGK---KLEVNYSKYPNIT 335
>gi|413933764|gb|AFW68315.1| hypothetical protein ZEAMMB73_143783 [Zea mays]
gi|413945515|gb|AFW78164.1| hypothetical protein ZEAMMB73_011466 [Zea mays]
Length = 444
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
Query: 107 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
N Y+ + + Q S G + + + +LL +I +M Y +T++VLH VF A+G V+
Sbjct: 72 NVYMQFSSHQELTTDQSSHGRNSDQESEPNRILLVTIHHMIYPITVEVLHQVFKAYGFVE 131
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
KI F K+ G QALIQ+ Q AV A +L G IYDG C+L I YS ++L + NND
Sbjct: 132 KIVTFQKSAGFQALIQFHSRQEAVEAFGSLHGRNIYDGC-CQLDIQYSNLSELQVHYNND 190
Query: 227 RSRDYTLPSTP 237
RSRD+T PS P
Sbjct: 191 RSRDFTNPSLP 201
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 107/228 (46%), Gaps = 48/228 (21%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VF A+GFV KI TF+K+AGFQAL+QF + A A +L GR+I G C L I
Sbjct: 123 VFKAYGFVEKIVTFQKSAGFQALIQFHSRQEAVEAFGSLHGRNIYD-------GCCQLDI 175
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPV--------------------------------- 112
YS ++L V + + RSRD+TNP LP
Sbjct: 176 QYSNLSELQVHYNNDRSRDFTNPSLPTEQRPRASQQAYPDPANLYAFQQAGASYAQMGRA 235
Query: 113 APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD 172
A A G L G+ G ++++++ N + + D L +FS +G + +I +
Sbjct: 236 AMIAAAFGGTLPHGVTGTN--ERCTLIVSNLNNDK--IDEDKLFNLFSLYGNIVRIKVL- 290
Query: 173 KNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 220
+N AL++ D A +A L+G ++ KL ++YS++ +++
Sbjct: 291 RNKPDHALVEMADGLQAELAVHYLKGAILFGK---KLEVNYSKYPNIT 335
>gi|356499519|ref|XP_003518587.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Glycine max]
Length = 439
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 103/216 (47%), Gaps = 47/216 (21%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC---- 81
+F FG + K+ A QAL+Q D SA NAL N+ P
Sbjct: 25 LFQPFGVITKLVMLR--AKNQALLQMQDI---PSAVNALQ--------FYANVQPSIRGR 71
Query: 82 TLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLA 141
+ + +S+H +L+ Q+ D EP + +LL
Sbjct: 72 NVYVQFSSHQELTTMDQNQARED----------------------------EP-NRILLV 102
Query: 142 SIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCI 201
++ +M Y +T DVLH VFS G V+KI F K+ G QALIQY Q+AV A+ L+G I
Sbjct: 103 TVHHMLYPITADVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVTARSTLQGRNI 162
Query: 202 YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
YDG C+L I +S +L + NNDRSRD+T P+ P
Sbjct: 163 YDGC-CQLDIQFSNLDELQVNYNNDRSRDFTNPNLP 197
>gi|193786069|dbj|BAG50959.1| unnamed protein product [Homo sapiens]
Length = 457
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 72/118 (61%), Gaps = 1/118 (0%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 76 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 135
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK AL+G IY+ C L I +S+ L++K NND+SRD+T P + QPS+
Sbjct: 136 NAHYAKMALDGQNIYNAC-CTLRIDFSKLISLNVKYNNDKSRDFTRLDLPTGDGQPSL 192
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 105 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 157
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S L+VK+ + +SRD+T LP
Sbjct: 158 IDFSKLISLNVKYNNDKSRDFTRLDLP 184
>gi|334702287|gb|AEG89703.1| polypyrimidine tract-binding protein 1 [Solanum tuberosum]
Length = 441
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 110/220 (50%), Gaps = 52/220 (23%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETA-------SSAKNALDGRSIPRYLLPEN 77
+F FG + K+ A QAL+Q D +A S+ + ++ GR++
Sbjct: 24 QLFQPFGVITKLVMLR--AKNQALLQMQDVPSAVKALQFYSNVQPSIRGRNV-------- 73
Query: 78 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 137
+ +S+H +L+ +D + Q G+ EP +
Sbjct: 74 ------YVQFSSHQELT---------------------TMDQNAQ------GRGDEP-NR 99
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
+LL +I +M Y +T+DVLH VFS G V+KI F K+ G QALIQY Q++V A+ +L+
Sbjct: 100 ILLVTIHHMLYPITVDVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQVQQSSVSARNSLQ 159
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
G IYDG C+L I +S +L + NN+RSRDYT P+ P
Sbjct: 160 GRNIYDGC-CQLDIQFSNLDELQVNYNNERSRDYTNPNLP 198
>gi|224082480|ref|XP_002306709.1| predicted protein [Populus trichocarpa]
gi|222856158|gb|EEE93705.1| predicted protein [Populus trichocarpa]
Length = 434
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G+ EP + +LL +I +MQY +T+DVLH VFS G V+K+ F K+ G QALIQY Q+
Sbjct: 92 GRGEEP-NRILLITIHHMQYPITVDVLHQVFSPHGFVEKMVTFQKSAGFQALIQYQSRQS 150
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
AV A+ +L+G IYDG C+L I +S +L + NND SRD+T P+ P
Sbjct: 151 AVQARTSLQGRNIYDGC-CQLDIQFSNLDELQVNYNNDSSRDFTNPNLP 198
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 105/217 (48%), Gaps = 37/217 (17%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFS GFV K+ TF+K+AGFQAL+Q+ ++A A+ +L GR+I G C L I
Sbjct: 120 VFSPHGFVEKMVTFQKSAGFQALIQYQSRQSAVQARTSLQGRNIYD-------GCCQLDI 172
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDAS----------------------GQL 123
+S +L V + + SRD+TNP LP A + G L
Sbjct: 173 QFSNLDELQVNYNNDSSRDFTNPNLPSEQKARSSQVCTRLLLYFHMPNAAAIAAAFGGGL 232
Query: 124 SVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 183
G+ G +L++++ + + D L +FS +G + +I + +N AL+Q
Sbjct: 233 PPGISGTN--DRCTILVSNLNPDR--IDEDKLFNLFSLYGNIVRIKLL-RNKPDHALVQM 287
Query: 184 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 220
D A +A L+G ++ ++ +++S+H +++
Sbjct: 288 GDGFQAELAVHFLKGAMLFGK---RMEVNFSKHPNIT 321
>gi|223647470|gb|ACN10493.1| Polypyrimidine tract-binding protein 1 [Salmo salar]
Length = 574
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
Query: 127 LDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 186
+ + + +S VL +EN+ Y VTL+VLH +FS +G V KI F KN QAL+QY D
Sbjct: 189 MGARGMATQSPVLRVIVENLFYPVTLEVLHQIFSKYGSVLKIITFTKNNQFQALVQYADP 248
Query: 187 QTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 234
TA K +L+G IY+ G C L +S+S+ T L++K NND+SRDYT P
Sbjct: 249 MTAQHTKMSLDGQNIYN-GCCTLRVSFSKLTSLNVKFNNDKSRDYTRP 295
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 54/86 (62%), Gaps = 7/86 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS +G V KI TF K FQALVQ++D TA K +LDG++I G CTLR
Sbjct: 219 QIFSKYGSVLKIITFTKNNQFQALVQYADPMTAQHTKMSLDGQNIYN-------GCCTLR 271
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYL 110
+++S T L+VKF + +SRDYT P L
Sbjct: 272 VSFSKLTSLNVKFNNDKSRDYTRPDL 297
>gi|213513392|ref|NP_001133760.1| Polypyrimidine tract-binding protein 1 [Salmo salar]
gi|209155238|gb|ACI33851.1| Polypyrimidine tract-binding protein 1 [Salmo salar]
Length = 574
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
Query: 127 LDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 186
+ + + +S VL +EN+ Y VTL+VLH +FS +G V KI F KN QAL+QY D
Sbjct: 189 MGARGMATQSPVLRVIVENLFYPVTLEVLHQIFSKYGSVLKIITFTKNNQFQALVQYADP 248
Query: 187 QTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 234
TA K +L+G IY+ G C L +S+S+ T L++K NND+SRDYT P
Sbjct: 249 MTAQHTKMSLDGQNIYN-GCCTLRVSFSKLTSLNVKFNNDKSRDYTRP 295
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 54/86 (62%), Gaps = 7/86 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS +G V KI TF K FQALVQ++D TA K +LDG++I G CTLR
Sbjct: 219 QIFSKYGSVLKIITFTKNNQFQALVQYADPMTAQHTKMSLDGQNIYN-------GCCTLR 271
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYL 110
+++S T L+VKF + +SRDYT P L
Sbjct: 272 VSFSKLTSLNVKFNNDKSRDYTRPDL 297
>gi|351710810|gb|EHB13729.1| Regulator of differentiation 1, partial [Heterocephalus glaber]
Length = 539
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 70/111 (63%), Gaps = 1/111 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 165 QSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKM 224
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 225 ALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPSGDGQPSL 274
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 187 QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLR 239
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRD+T LP
Sbjct: 240 IDFSKLTSLNVKYNNDKSRDFTRLDLP 266
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 78/193 (40%), Gaps = 20/193 (10%)
Query: 26 VFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G VH++ F K ALVQ +D A A N L G+ + +L R
Sbjct: 365 LFGVYGDVHRVKIMFNKKE--NALVQMADAHQAQLAMNHLSGQRLYGKVL---------R 413
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIE 144
T S H + + + + T + G + + + P S L +
Sbjct: 414 ATLSKHQTVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNF----QNIFPPSATL--HLS 467
Query: 145 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 204
N+ +VT+D L +F+ G K F + ALIQ V+ A+ A L H + G
Sbjct: 468 NIPPSVTMDDLKNIFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDL--G 525
Query: 205 GFCKLHISYSRHT 217
L +S+S+ T
Sbjct: 526 ENHHLRVSFSKST 538
>gi|334702289|gb|AEG89704.1| polypyrimidine tract-binding protein 6 [Solanum tuberosum]
Length = 444
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 108/220 (49%), Gaps = 52/220 (23%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETA-------SSAKNALDGRSIPRYLLPEN 77
+F FG + K+ A QAL+Q D A S+ + ++ GRS+
Sbjct: 24 QLFQPFGVITKLVMLR--AKNQALLQMQDIAAAVNAMQFYSNVQPSIRGRSV-------- 73
Query: 78 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 137
+ +S+H +L+ +D + Q G+ EP +
Sbjct: 74 ------YVQFSSHQELT---------------------TVDQNAQ------GRGDEP-NR 99
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
+LL SI ++ Y +T++VLH VFS G V+KI F K+ G QALIQY QTA+ A+ +L+
Sbjct: 100 ILLVSIHHVLYPITVEVLHQVFSPHGIVEKIVTFQKSAGFQALIQYELTQTAISARNSLQ 159
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
G IYD G C+L I +S +L + NN+R RD+T P+ P
Sbjct: 160 GRNIYD-GCCQLDIQFSNLDELQVSYNNERPRDFTNPNLP 198
>gi|449503770|ref|XP_004162168.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Cucumis sativus]
Length = 432
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 117/237 (49%), Gaps = 43/237 (18%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F FG + K+ A QAL+Q D SA NAL N+ P ++R
Sbjct: 24 QLFQPFGVITKLVMLR--AKNQALMQMQD---VPSAVNALQ--------FFANLQP-SIR 69
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIE 144
++ V+F SH+ + D + Q G+ EP + +LL +I
Sbjct: 70 -----GRNVYVQFSSHQE-----------LTTADQNAQ------GRGDEP-NRILLVTIH 106
Query: 145 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 204
+M Y +T++VLH VF G V+KI F K+ G QALIQY Q AV A+ AL+G IYDG
Sbjct: 107 HMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQTRQCAVSARTALQGRNIYDG 166
Query: 205 GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQY 261
C+L I +S +L + NN+RSRD+T PS P S+P G+ P G T Y
Sbjct: 167 C-CQLDIQFSNLDELQVNYNNERSRDFTNPSLP---SEPK--GRSSQPGYGDTGGMY 217
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 105/220 (47%), Gaps = 39/220 (17%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
VF GFV KI TF+K+AGFQAL+Q+ + A SA+ AL GR+I G C L
Sbjct: 119 QVFFPHGFVEKIVTFQKSAGFQALIQYQTRQCAVSARTALQGRNIYD-------GCCQLD 171
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDAS------------------------ 120
I +S +L V + + RSRD+TNP LP P +
Sbjct: 172 IQFSNLDELQVNYNNERSRDFTNPSLPSEPKGRSSQPGYGDTGGMYPQMANAAAVAAAFG 231
Query: 121 GQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQAL 180
G L G+ G VL++++ + + D L +FS +G + +I + +N AL
Sbjct: 232 GGLPPGVSGTN--DRCTVLVSNLNPDR--IDEDKLFNLFSIYGNIVRIKLL-RNKPDHAL 286
Query: 181 IQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 220
+Q D A +A L+G ++ +L +++S+H +++
Sbjct: 287 VQMGDGFQAELAVHFLKGAMLFGK---RLEVNFSKHPNIT 323
>gi|449441199|ref|XP_004138370.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 2 [Cucumis sativus]
Length = 408
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 80/133 (60%), Gaps = 7/133 (5%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G+ EP + +LL +I +M Y +T++VLH VF G V+KI F K+ G QALIQY Q
Sbjct: 56 GRGDEP-NRILLVTIHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQTRQC 114
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
AV A+ AL+G IYDG C+L I +S +L + NN+RSRD+T PS P S+P G+
Sbjct: 115 AVSARTALQGRNIYDGC-CQLDIQFSNLDELQVNYNNERSRDFTNPSLP---SEPK--GR 168
Query: 249 QPVPMVGATANQY 261
P G T Y
Sbjct: 169 SSQPGYGDTGGMY 181
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 107/230 (46%), Gaps = 47/230 (20%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
VF GFV KI TF+K+AGFQAL+Q+ + A SA+ AL GR+I G C L
Sbjct: 83 QVFFPHGFVEKIVTFQKSAGFQALIQYQTRQCAVSARTALQGRNIYD-------GCCQLD 135
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSA---------------IDASGQLSVGLD- 128
I +S +L V + + RSRD+TNP LP P + SG VG
Sbjct: 136 IQFSNLDELQVNYNNERSRDFTNPSLPSEPKGRSSQPGYGDTGGMYPLQPSGARPVGFSQ 195
Query: 129 -----------GKKLEP-------ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM 170
G L P VL++++ + + D L +FS +G + +I +
Sbjct: 196 MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDR--IDEDKLFNLFSIYGNIVRIKL 253
Query: 171 FDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 220
+N AL+Q D A +A L+G ++ +L +++S+H +++
Sbjct: 254 L-RNKPDHALVQMGDGFQAELAVHFLKGAMLFGK---RLEVNFSKHPNIT 299
>gi|449441197|ref|XP_004138369.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 1 [Cucumis sativus]
Length = 434
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 117/237 (49%), Gaps = 43/237 (18%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F FG + K+ A QAL+Q D SA NAL N+ P ++R
Sbjct: 26 QLFQPFGVITKLVMLR--AKNQALMQMQD---VPSAVNALQ--------FFANLQP-SIR 71
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIE 144
++ V+F SH+ + D + Q G+ EP + +LL +I
Sbjct: 72 -----GRNVYVQFSSHQE-----------LTTADQNAQ------GRGDEP-NRILLVTIH 108
Query: 145 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 204
+M Y +T++VLH VF G V+KI F K+ G QALIQY Q AV A+ AL+G IYDG
Sbjct: 109 HMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQTRQCAVSARTALQGRNIYDG 168
Query: 205 GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQY 261
C+L I +S +L + NN+RSRD+T PS P S+P G+ P G T Y
Sbjct: 169 C-CQLDIQFSNLDELQVNYNNERSRDFTNPSLP---SEPK--GRSSQPGYGDTGGMY 219
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 105/220 (47%), Gaps = 39/220 (17%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
VF GFV KI TF+K+AGFQAL+Q+ + A SA+ AL GR+I G C L
Sbjct: 121 QVFFPHGFVEKIVTFQKSAGFQALIQYQTRQCAVSARTALQGRNIYD-------GCCQLD 173
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDAS------------------------ 120
I +S +L V + + RSRD+TNP LP P +
Sbjct: 174 IQFSNLDELQVNYNNERSRDFTNPSLPSEPKGRSSQPGYGDTGGMYPQMANAAAVAAAFG 233
Query: 121 GQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQAL 180
G L G+ G VL++++ + + D L +FS +G + +I + +N AL
Sbjct: 234 GGLPPGVSGTN--DRCTVLVSNLNPDR--IDEDKLFNLFSIYGNIVRIKLL-RNKPDHAL 288
Query: 181 IQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 220
+Q D A +A L+G ++ +L +++S+H +++
Sbjct: 289 VQMGDGFQAELAVHFLKGAMLFGK---RLEVNFSKHPNIT 325
>gi|341888906|gb|EGT44841.1| CBN-PTB-1 protein [Caenorhabditis brenneri]
Length = 509
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 75/119 (63%), Gaps = 2/119 (1%)
Query: 119 ASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQ 178
A+G +S G + +P S VL IENM + V+LDVLH +F+ +G V +I F KN Q
Sbjct: 107 ANGSVSNFEVGTQQQPNS-VLRTIIENMMFPVSLDVLHQLFARYGKVLRIITFSKNNTFQ 165
Query: 179 ALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
AL+Q + +A +AK LE +Y+G C L I YS+ + L++K NND+SRDYT P+ P
Sbjct: 166 ALVQMSEANSAQLAKAGLENQNVYNGC-CTLRIDYSKLSTLNVKYNNDKSRDYTNPNLP 223
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 58/99 (58%), Gaps = 7/99 (7%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+F+ +G V +I TF K FQALVQ S+ +A AK L+ +++ G CTLRI
Sbjct: 145 LFARYGKVLRIITFSKNNTFQALVQMSEANSAQLAKAGLENQNVYN-------GCCTLRI 197
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLS 124
YS + L+VK+ + +SRDYTNP LP I+ S LS
Sbjct: 198 DYSKLSTLNVKYNNDKSRDYTNPNLPAGEMTIEQSLALS 236
>gi|194740822|ref|XP_001952889.1| GF17502 [Drosophila ananassae]
gi|190625948|gb|EDV41472.1| GF17502 [Drosophila ananassae]
Length = 835
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 82/152 (53%), Gaps = 8/152 (5%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 413 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 472
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGAT 257
G IY+ G C L I S+ T L++K NND+SRD+T P+ P P G +P G
Sbjct: 473 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP-----PGEPGVDLMPTAGGL 526
Query: 258 ANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPP 289
N + A P ++P + G +PP
Sbjct: 527 MNTNDLLLIA--PRQRPSLTVNGLGAPGVLPP 556
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 432 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 484
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 118
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 485 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 518
>gi|386766857|ref|NP_001247399.1| hephaestus, isoform Y [Drosophila melanogaster]
gi|383293058|gb|AFH06716.1| hephaestus, isoform Y [Drosophila melanogaster]
Length = 898
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK
Sbjct: 516 NTVLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSL 575
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
L+G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 576 LDGQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 616
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 537 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 589
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 118
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 590 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 623
>gi|195505570|ref|XP_002099562.1| GE23291 [Drosophila yakuba]
gi|194185663|gb|EDW99274.1| GE23291 [Drosophila yakuba]
Length = 802
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 74/123 (60%), Gaps = 6/123 (4%)
Query: 115 SAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN 174
SA+ A+G + G + VL +E++ Y V+LD+LH +F +G V KI F KN
Sbjct: 404 SAVSAAGNNTNSAGG-----PNTVLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKN 458
Query: 175 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 234
QALIQYPD +A AK L+G IY+ G C L I S+ T L++K NND+SRD+T P
Sbjct: 459 NSFQALIQYPDANSAQHAKSLLDGQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNP 517
Query: 235 STP 237
+ P
Sbjct: 518 ALP 520
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 441 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 493
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 118
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 494 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 527
>gi|365813382|pdb|3ZZY|A Chain A, Crystal Structure Of A Raver1 Pri3 Peptide In Complex With
Polypyrimidine Tract Binding Protein Rrm2
gi|365813383|pdb|3ZZY|B Chain B, Crystal Structure Of A Raver1 Pri3 Peptide In Complex With
Polypyrimidine Tract Binding Protein Rrm2
gi|365813386|pdb|3ZZZ|A Chain A, Crystal Structure Of A Raver1 Pri4 Peptide In Complex With
Polypyrimidine Tract Binding Protein Rrm2
gi|365813387|pdb|3ZZZ|B Chain B, Crystal Structure Of A Raver1 Pri4 Peptide In Complex With
Polypyrimidine Tract Binding Protein Rrm2
Length = 130
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 19 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 78
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P
Sbjct: 79 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLP 126
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK +LDG++I CTLR
Sbjct: 47 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-------ACCTLR 99
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
I +S T L+VK+ + +SRDYT P LP S
Sbjct: 100 IDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 130
>gi|28571965|ref|NP_788780.1| hephaestus, isoform H [Drosophila melanogaster]
gi|281362946|ref|NP_001163787.1| hephaestus, isoform O [Drosophila melanogaster]
gi|281362952|ref|NP_001163790.1| hephaestus, isoform R [Drosophila melanogaster]
gi|16303586|gb|AAL14775.1| hephaestus [Drosophila melanogaster]
gi|28381533|gb|AAO41627.1| hephaestus, isoform H [Drosophila melanogaster]
gi|157816746|gb|ABV82366.1| LD04329p [Drosophila melanogaster]
gi|272477264|gb|ACZ95080.1| hephaestus, isoform O [Drosophila melanogaster]
gi|272477267|gb|ACZ95083.1| hephaestus, isoform R [Drosophila melanogaster]
Length = 789
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK
Sbjct: 403 NTVLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSL 462
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
L+G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 463 LDGQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 503
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 424 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 476
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 118
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 477 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 510
>gi|194904631|ref|XP_001981034.1| GG11844 [Drosophila erecta]
gi|190655672|gb|EDV52904.1| GG11844 [Drosophila erecta]
Length = 800
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 74/123 (60%), Gaps = 6/123 (4%)
Query: 115 SAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN 174
SA+ A+G + G + VL +E++ Y V+LD+LH +F +G V KI F KN
Sbjct: 398 SAVSAAGNNTNSAGG-----PNTVLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKN 452
Query: 175 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 234
QALIQYPD +A AK L+G IY+ G C L I S+ T L++K NND+SRD+T P
Sbjct: 453 NSFQALIQYPDANSAQHAKSLLDGQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNP 511
Query: 235 STP 237
+ P
Sbjct: 512 ALP 514
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 435 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 487
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 118
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 488 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 521
>gi|386766855|ref|NP_001247398.1| hephaestus, isoform W [Drosophila melanogaster]
gi|383293057|gb|AFH06715.1| hephaestus, isoform W [Drosophila melanogaster]
Length = 799
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK
Sbjct: 417 NTVLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSL 476
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
L+G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 477 LDGQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 517
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 438 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 490
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 118
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 491 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 524
>gi|198452628|ref|XP_001358876.2| GA15927, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198132005|gb|EAL28019.2| GA15927, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 785
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 401 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 460
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 461 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 499
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 420 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 472
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 118
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 473 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 506
>gi|45552115|ref|NP_788776.2| hephaestus, isoform G [Drosophila melanogaster]
gi|45446737|gb|AAO41623.2| hephaestus, isoform G [Drosophila melanogaster]
Length = 615
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 231 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 290
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 291 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 329
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 250 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 302
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 118
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 303 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 336
>gi|24651780|ref|NP_733460.1| hephaestus, isoform B [Drosophila melanogaster]
gi|28571963|ref|NP_733461.2| hephaestus, isoform A [Drosophila melanogaster]
gi|28571967|ref|NP_788773.1| hephaestus, isoform D [Drosophila melanogaster]
gi|28571969|ref|NP_788774.1| hephaestus, isoform E [Drosophila melanogaster]
gi|28571971|ref|NP_788777.1| hephaestus, isoform I [Drosophila melanogaster]
gi|28571973|ref|NP_788778.1| hephaestus, isoform J [Drosophila melanogaster]
gi|28571975|ref|NP_788779.1| hephaestus, isoform K [Drosophila melanogaster]
gi|28571979|ref|NP_788775.1| hephaestus, isoform F [Drosophila melanogaster]
gi|161079548|ref|NP_001097994.1| hephaestus, isoform N [Drosophila melanogaster]
gi|281362948|ref|NP_001163788.1| hephaestus, isoform P [Drosophila melanogaster]
gi|281362960|ref|NP_001163794.1| hephaestus, isoform V [Drosophila melanogaster]
gi|18042167|gb|AAL57860.1|AF455053_1 hephaestus [Drosophila melanogaster]
gi|23172813|gb|AAF57208.2| hephaestus, isoform B [Drosophila melanogaster]
gi|28381525|gb|AAN14297.2| hephaestus, isoform A [Drosophila melanogaster]
gi|28381526|gb|AAO41620.1| hephaestus, isoform D [Drosophila melanogaster]
gi|28381527|gb|AAO41621.1| hephaestus, isoform E [Drosophila melanogaster]
gi|28381528|gb|AAO41622.1| hephaestus, isoform F [Drosophila melanogaster]
gi|28381530|gb|AAO41624.1| hephaestus, isoform I [Drosophila melanogaster]
gi|28381531|gb|AAO41625.1| hephaestus, isoform J [Drosophila melanogaster]
gi|28381532|gb|AAO41626.1| hephaestus, isoform K [Drosophila melanogaster]
gi|158030462|gb|ABW08818.1| hephaestus, isoform N [Drosophila melanogaster]
gi|189182140|gb|ACD81846.1| LD11808p [Drosophila melanogaster]
gi|272477265|gb|ACZ95081.1| hephaestus, isoform P [Drosophila melanogaster]
gi|272477271|gb|ACZ95087.1| hephaestus, isoform V [Drosophila melanogaster]
Length = 608
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 224 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 283
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 284 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 322
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 243 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 295
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 118
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 296 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 329
>gi|17864284|ref|NP_524703.1| hephaestus, isoform C [Drosophila melanogaster]
gi|281362954|ref|NP_001163791.1| hephaestus, isoform S [Drosophila melanogaster]
gi|281362956|ref|NP_001163792.1| hephaestus, isoform T [Drosophila melanogaster]
gi|281362958|ref|NP_001163793.1| hephaestus, isoform U [Drosophila melanogaster]
gi|6665714|gb|AAF22979.1|AF211191_1 polypyrimidine tract binding protein [Drosophila melanogaster]
gi|23172814|gb|AAN14296.1| hephaestus, isoform C [Drosophila melanogaster]
gi|272477268|gb|ACZ95084.1| hephaestus, isoform S [Drosophila melanogaster]
gi|272477269|gb|ACZ95085.1| hephaestus, isoform T [Drosophila melanogaster]
gi|272477270|gb|ACZ95086.1| hephaestus, isoform U [Drosophila melanogaster]
Length = 581
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 197 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 256
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 257 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 295
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 216 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 268
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 118
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 269 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 302
>gi|17861972|gb|AAL39463.1| LD03185p [Drosophila melanogaster]
Length = 571
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 224 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 283
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 284 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 322
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 243 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 295
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 118
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 296 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 329
>gi|327263703|ref|XP_003216657.1| PREDICTED: regulator of differentiation 1-like [Anolis
carolinensis]
Length = 558
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 92/164 (56%), Gaps = 7/164 (4%)
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVG---LDGKKLEPESNVLLA 141
I YS H +L +++R T L A SA+ + G G +G +S+VL
Sbjct: 134 IQYSNHRELKTDNLPNQAR--TQAALQ-AVSAVQSGGLALTGAPATEGGLPPGQSSVLRI 190
Query: 142 SIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCI 201
+EN+ Y VTL+VL+ +FS FG V KI F KN QAL+QY D A A+ AL+G I
Sbjct: 191 IVENLFYPVTLEVLYQIFSKFGTVLKIITFTKNNQFQALLQYADPLNAHYARMALDGQNI 250
Query: 202 YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
Y+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 251 YN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPSGDGQPSL 293
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 117/267 (43%), Gaps = 73/267 (27%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D A A+ ALDG++I CTLR
Sbjct: 206 QIFSKFGTVLKIITFTKNNQFQALLQYADPLNAHYARMALDGQNIYN-------ACCTLR 258
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP--------------------------------- 111
I +S T L+VK+ + +SRD+T LP
Sbjct: 259 IDFSKLTSLNVKYNNDKSRDFTRLDLPSGDGQPSLEPTMAAAFGTPGIISSPYAGAAGFA 318
Query: 112 -------------------VAPSAIDAS---GQLSV-GLDGKKLEPESNVLLASIENMQY 148
+ P AI S G++++ G+ G P ++VLL S N
Sbjct: 319 PAIGFPQAAGLSVQGVPSALGPLAITTSTMTGRMAIPGVHGM---PGNSVLLVSNLNPD- 374
Query: 149 AVTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFC 207
A+T D L ++F +G V ++ MF+K AL+Q D A +A L G +Y G
Sbjct: 375 AITPDGLFILFGVYGDVHRVKIMFNKKE--NALVQMADATQAQLAMNHLNGQKLY-GKML 431
Query: 208 KLHISYSRHTDLSIKVNNDR--SRDYT 232
++ +S + L + D+ ++DY+
Sbjct: 432 RVTLSKHQTVQLPREGQEDQGLTKDYS 458
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 26 VFSAFGFVHKITT-FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G VH++ F K ALVQ +D A A N L+G+ + +L R
Sbjct: 384 LFGVYGDVHRVKIMFNKKE--NALVQMADATQAQLAMNHLNGQKLYGKML---------R 432
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIE 144
+T S H + + + + T Y G + + + P S L +
Sbjct: 433 VTLSKHQTVQLPREGQEDQGLTKDYSNSPLHRFKKPGSKNF----QNIFPPSATL--HLS 486
Query: 145 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 204
N+ +VT+D L +F+ G + K F ALIQ V+ A+ A L H + G
Sbjct: 487 NIPPSVTVDDLKNLFADTGCIVKAFKFFPKDRKMALIQLGSVEEAIQALIELHNHDL--G 544
Query: 205 GFCKLHISYSRHT 217
L +S+S+ T
Sbjct: 545 ENHHLRVSFSKST 557
>gi|33414511|ref|NP_877970.1| polypyrimidine tract-binding protein [Rattus norvegicus]
gi|29824910|gb|AAO92353.1| SMPTB [Rattus norvegicus]
gi|149028489|gb|EDL83874.1| polypyrimidine tract-binding protein [Rattus norvegicus]
Length = 588
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL +EN Y VTL+VLH +FS FG V KI KN QAL+QY V +A AK
Sbjct: 186 QSPVLRILVENYFYRVTLEVLHQIFSRFGTVLKIITCTKNNRFQALLQYAHVMSAERAKL 245
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPS 244
L+G IYD C L IS+S T+L +K NND+SRDY P P +SQPS
Sbjct: 246 FLDGQNIYDAC-CTLRISFSGLTNLMVKYNNDKSRDYMRPDLPSDDSQPS 294
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI T K FQAL+Q++ +A AK LDG++I CTLR
Sbjct: 208 QIFSRFGTVLKIITCTKNNRFQALLQYAHVMSAERAKLFLDGQNIYD-------ACCTLR 260
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I++S T+L VK+ + +SRDY P LP
Sbjct: 261 ISFSGLTNLMVKYNNDKSRDYMRPDLP 287
>gi|281362950|ref|NP_001163789.1| hephaestus, isoform Q [Drosophila melanogaster]
gi|272477266|gb|ACZ95082.1| hephaestus, isoform Q [Drosophila melanogaster]
Length = 493
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 109 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 168
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 169 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 207
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 128 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 180
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 118
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 181 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 214
>gi|390178277|ref|XP_003736615.1| GA15927, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859388|gb|EIM52688.1| GA15927, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 572
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 188 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 247
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 248 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 286
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 207 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 259
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 118
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 260 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 293
>gi|161079544|ref|NP_001097993.1| hephaestus, isoform M [Drosophila melanogaster]
gi|16589094|gb|AAL27010.1|AF436844_1 hephaestus [Drosophila melanogaster]
gi|158030461|gb|ABW08817.1| hephaestus, isoform M [Drosophila melanogaster]
Length = 568
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 184 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 243
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 244 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 282
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 203 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 255
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 118
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 256 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 289
>gi|161079541|ref|NP_001097992.1| hephaestus, isoform L [Drosophila melanogaster]
gi|158030460|gb|ABW08816.1| hephaestus, isoform L [Drosophila melanogaster]
Length = 622
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 238 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 297
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 298 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 336
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 257 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 309
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 118
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 310 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 343
>gi|50261257|gb|AAT72299.1| polypyrimidine tract binding protein [Drosophila melanogaster]
Length = 493
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 109 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 168
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 169 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 207
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 128 QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYN-------GCCTLR 180
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 118
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 181 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 214
>gi|195446082|ref|XP_002070619.1| GK10936 [Drosophila willistoni]
gi|194166704|gb|EDW81605.1| GK10936 [Drosophila willistoni]
Length = 629
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 194 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDAHSAQHAKSLLD 253
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 254 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 292
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G V KI TF K FQAL+Q+ D +A AK+ LDG++I G CTLR
Sbjct: 213 QIFQRYGKVLKIVTFTKNNSFQALIQYPDAHSAQHAKSLLDGQNIYN-------GCCTLR 265
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 118
I S T L+VK+ + +SRD+TNP LP +D
Sbjct: 266 IDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 299
>gi|25146814|ref|NP_741042.1| Protein PTB-1, isoform b [Caenorhabditis elegans]
gi|20338919|emb|CAD30435.1| Protein PTB-1, isoform b [Caenorhabditis elegans]
Length = 453
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 77/119 (64%), Gaps = 2/119 (1%)
Query: 119 ASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQ 178
A+G +S G + +P S VL IENM + V+LDVL+ +F+ +G V +I F+KN Q
Sbjct: 51 ANGSVSNFEVGTQQQPNS-VLRTIIENMMFPVSLDVLYQLFTRYGKVLRIITFNKNNTFQ 109
Query: 179 ALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
AL+Q + +A +AK+ LE +Y+G C L I YS+ + L++K NND+SRDYT P+ P
Sbjct: 110 ALVQMSEANSAQLAKQGLENQNVYNGC-CTLRIDYSKLSTLNVKYNNDKSRDYTNPNLP 167
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 7/100 (7%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+F+ +G V +I TF K FQALVQ S+ +A AK L+ +++ G CTLRI
Sbjct: 89 LFTRYGKVLRIITFNKNNTFQALVQMSEANSAQLAKQGLENQNVYN-------GCCTLRI 141
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSV 125
YS + L+VK+ + +SRDYTNP LP ++ + +S+
Sbjct: 142 DYSKLSTLNVKYNNDKSRDYTNPNLPAGEMTLEQTIAMSI 181
>gi|148701925|gb|EDL33872.1| mCG9934 [Mus musculus]
Length = 559
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+ VL ++N Y VTL+VLH +FS FG V KI + KN QAL+QY +A AK
Sbjct: 152 QGTVLRILVDNFFYRVTLEVLHQLFSRFGTVLKIITYTKNNRFQALLQYAHSMSAKCAKL 211
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPS 244
L+G IYD C L IS+S T+L +K NND SRDYT P P SQPS
Sbjct: 212 CLDGQNIYDAC-CTLRISFSGLTNLIVKYNNDESRDYTRPDLPSDESQPS 260
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI T+ K FQAL+Q++ + +A AK LDG++I CTLR
Sbjct: 174 QLFSRFGTVLKIITYTKNNRFQALLQYAHSMSAKCAKLCLDGQNIYD-------ACCTLR 226
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I++S T+L VK+ + SRDYT P LP
Sbjct: 227 ISFSGLTNLIVKYNNDESRDYTRPDLP 253
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 150 VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKL 209
VT L ++F A+G VQ++ + N AL+Q D A +A + L GH +Y C L
Sbjct: 377 VTPQSLFILFGAYGDVQRVKILF-NRKENALVQMADGSQAELALKHLNGHKLYGKALCIL 435
Query: 210 HISYSRHTDLSI----KVNNDRSRDYT 232
S+H + + K + D +++Y
Sbjct: 436 P---SKHQSVKLPREGKEDQDLTKEYV 459
>gi|357497749|ref|XP_003619163.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355494178|gb|AES75381.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 318
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 72/109 (66%), Gaps = 2/109 (1%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G++ EP + +LL ++ + Y +T+DVL VFS G V+KI F K+ G QALIQY Q+
Sbjct: 55 GREDEP-NRILLVTVHQVLYPMTVDVLQQVFSPHGFVEKIVTFQKSAGFQALIQYETRQS 113
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
AV A+ AL+G +YD G C+L I +S +L + NNDRSRD+T P+ P
Sbjct: 114 AVTARGALQGRNVYD-GCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLP 161
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 55/87 (63%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
VFS GFV KI TF+K+AGFQAL+Q+ ++A +A+ AL GR++ G C L
Sbjct: 82 QVFSPHGFVEKIVTFQKSAGFQALIQYETRQSAVTARGALQGRNVYD-------GCCQLD 134
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S +L V + + RSRD+TNP LP
Sbjct: 135 IQFSNLDELQVNYNNDRSRDFTNPNLP 161
>gi|209362272|gb|ACI43571.1| RBP50 [Cucurbita maxima]
Length = 445
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 108/213 (50%), Gaps = 38/213 (17%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F FG + K+ A QAL+Q D SA NAL N+ P ++R
Sbjct: 24 QLFQPFGVITKLVMLR--AKNQALIQMQDV---PSAVNALQ--------FFANVQP-SIR 69
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIE 144
++ V+F SH+ + D + Q G+ EP + +LL +I
Sbjct: 70 -----GRNVYVQFSSHQEL-----------TTADQNAQ------GRGDEP-NRILLVTIH 106
Query: 145 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 204
+M Y +T++VLH VF G V+KI F K+ G QALIQY Q A+ A+ AL+G IYDG
Sbjct: 107 HMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQTRQCAISARTALQGRNIYDG 166
Query: 205 GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
C+L I +S +L + NN+RSRD+T PS P
Sbjct: 167 C-CQLDIQFSNLDELQVNYNNERSRDFTNPSLP 198
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 109/231 (47%), Gaps = 48/231 (20%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
VF GFV KI TF+K+AGFQAL+Q+ + A SA+ AL GR+I G C L
Sbjct: 119 QVFFPHGFVEKIVTFQKSAGFQALIQYQTRQCAISARTALQGRNIYD-------GCCQLD 171
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS----------------AIDASGQLSVGL- 127
I +S +L V + + RSRD+TNP LP P A+ ASG VG
Sbjct: 172 IQFSNLDELQVNYNNERSRDFTNPSLPSEPKGRPSQQPGYGDAGGMYALQASGAGPVGFP 231
Query: 128 -----------DGKKLEP-------ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 169
G L P VL++++ + + D L +FS +G + +I
Sbjct: 232 QMANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDR--IDEDKLFNLFSIYGNIARIK 289
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 220
+ +N AL+Q D A +A L+G ++ +L +++S+H +++
Sbjct: 290 LL-RNKPDHALVQMGDGFQAELAVHFLKGAMLFGK---RLEVNFSKHPNIT 336
>gi|443711043|gb|ELU04990.1| hypothetical protein CAPTEDRAFT_200421 [Capitella teleta]
Length = 524
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 72/119 (60%), Gaps = 5/119 (4%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL +ENM Y VT+DVL +FS +G V KI F KN QALIQ+ D A AK +L
Sbjct: 139 VLRVIVENMLYPVTIDVLKSIFSRYGQVLKIVTFSKNNTFQALIQFSDQIAAQTAKVSLH 198
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGA 256
G IY+ G C L I +S+ L++K NND+SRDYT P+ P + QP++ PV GA
Sbjct: 199 GQNIYN-GCCTLRIDFSKLQALNVKYNNDKSRDYTNPNLPSGDGQPAM----PVDAQGA 252
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 95/202 (47%), Gaps = 48/202 (23%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+FS +G V KI TF K FQAL+QFSD A +AK +L G++I G CTLRI
Sbjct: 159 IFSRYGQVLKIVTFSKNNTFQALIQFSDQIAAQTAKVSLHGQNIYN-------GCCTLRI 211
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSA----IDASGQLSVGLDGKKL--------- 132
+S L+VK+ + +SRDYTNP LP +DA G S+GL L
Sbjct: 212 DFSKLQALNVKYNNDKSRDYTNPNLPSGDGQPAMPVDAQGAGSMGLSAAGLGAFQAAVPF 271
Query: 133 -----------------------EPESN-VLLASIENMQYAVTLDVLHMVFSAFGPVQKI 168
+P++ VLL S N Q VT D L +F +G V ++
Sbjct: 272 SLAGLNAAAGLNAMNAAGLRLPGQPQTGAVLLVSNLNEQ-KVTPDALFTLFGVYGDVIRV 330
Query: 169 A-MFDKNGGLQALIQYPDVQTA 189
MF+K ALIQ+ D A
Sbjct: 331 KIMFNKKDN--ALIQFADAAQA 350
>gi|427796833|gb|JAA63868.1| Putative hephaestus, partial [Rhipicephalus pulchellus]
Length = 554
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 78/143 (54%), Gaps = 14/143 (9%)
Query: 95 VKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDV 154
V+F +HR N + +A + G + VL ++N Y VTLD+
Sbjct: 155 VQFSNHRELKTDNVHGALANQGGEGGG-------------ANTVLRVVVDNQIYPVTLDL 201
Query: 155 LHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYS 214
LH +FS G V KI F K+ QALIQ+ DV A AK AL+G IY+ C L I YS
Sbjct: 202 LHSIFSRAGKVLKIVTFTKSNSFQALIQFSDVMGAQAAKLALDGQSIYN-ACCTLRIEYS 260
Query: 215 RHTDLSIKVNNDRSRDYTLPSTP 237
+ T+L++K NND+SRD+T P+ P
Sbjct: 261 KLTNLNVKYNNDKSRDFTNPTLP 283
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 101/231 (43%), Gaps = 66/231 (28%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+FS G V KI TF K+ FQAL+QFSD A +AK ALDG+SI CTLRI
Sbjct: 205 IFSRAGKVLKIVTFTKSNSFQALIQFSDVMGAQAAKLALDGQSIYN-------ACCTLRI 257
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPV--------------------------------- 112
YS T+L+VK+ + +SRD+TNP LP
Sbjct: 258 EYSKLTNLNVKYNNDKSRDFTNPTLPTGDPTLDIGLAGSLGILASPFAAAGPGLTSPLTA 317
Query: 113 --------------------APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTL 152
APSA A G + L G+ S VLL S N Q VT
Sbjct: 318 AYAASATAGLPLGGFALSPSAPSAATALGMAGIRLPGQ--ATTSCVLLVSNLNEQM-VTP 374
Query: 153 DVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 202
D L +F +G V ++ +F+K ALIQ + Q A +A L+ +Y
Sbjct: 375 DALFTLFGVYGDVIRVKILFNKKD--SALIQMAEPQQAQLAMSHLDKIKVY 423
>gi|391330010|ref|XP_003739458.1| PREDICTED: polypyrimidine tract-binding protein 3-like [Metaseiulus
occidentalis]
Length = 588
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 73/119 (61%), Gaps = 4/119 (3%)
Query: 119 ASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQ 178
SG++S +G+ L + VL IEN Y +TLDVL+ +FS G V KI F+KN LQ
Sbjct: 214 GSGEISPTHNGQTL---NTVLRVIIENQLYPITLDVLNSLFSRIGKVLKIVTFNKNNTLQ 270
Query: 179 ALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
AL+QY D A AK L+G IY+ C L I YS+ L++K NND+SRD+T PS P
Sbjct: 271 ALVQYGDALAAQAAKMTLDGQHIYN-SCCTLRIEYSKLQQLNVKYNNDKSRDFTNPSLP 328
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 102/231 (44%), Gaps = 53/231 (22%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+FS G V KI TF K QALVQ+ D A +AK LDG+ I CTLRI
Sbjct: 250 LFSRIGKVLKIVTFNKNNTLQALVQYGDALAAQAAKMTLDGQHIYN-------SCCTLRI 302
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQL---------------------- 123
YS L+VK+ + +SRD+TNP LP +D G
Sbjct: 303 EYSKLQQLNVKYNNDKSRDFTNPSLPTGDPTLDNLGLANPLGMLHSPFANLGSHLTAAFN 362
Query: 124 ---------------SVGLDGKKL--EPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
++G+ +L P+S VLL S N Q VT D L +F +G V
Sbjct: 363 PPTLPLGGFALPAAQALGVASLRLPGTPQSCVLLVSNLNEQ-TVTPDALFTLFGVYGDVI 421
Query: 167 KIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 216
++ MF+K ALIQ + Q A VA L+ ++ +L ++ S+H
Sbjct: 422 RVKIMFNKKDS--ALIQMAEPQQAHVAMTHLDKIKLFGK---QLRVTPSKH 467
>gi|427789193|gb|JAA60048.1| Putative hephaestus [Rhipicephalus pulchellus]
Length = 559
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 78/143 (54%), Gaps = 14/143 (9%)
Query: 95 VKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDV 154
V+F +HR N + +A + G + VL ++N Y VTLD+
Sbjct: 160 VQFSNHRELKTDNVHGALANQGGEGGG-------------ANTVLRVVVDNQIYPVTLDL 206
Query: 155 LHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYS 214
LH +FS G V KI F K+ QALIQ+ DV A AK AL+G IY+ C L I YS
Sbjct: 207 LHSIFSRAGKVLKIVTFTKSNSFQALIQFSDVMGAQAAKLALDGQSIYN-ACCTLRIEYS 265
Query: 215 RHTDLSIKVNNDRSRDYTLPSTP 237
+ T+L++K NND+SRD+T P+ P
Sbjct: 266 KLTNLNVKYNNDKSRDFTNPTLP 288
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 101/231 (43%), Gaps = 66/231 (28%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+FS G V KI TF K+ FQAL+QFSD A +AK ALDG+SI CTLRI
Sbjct: 210 IFSRAGKVLKIVTFTKSNSFQALIQFSDVMGAQAAKLALDGQSIYN-------ACCTLRI 262
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPV--------------------------------- 112
YS T+L+VK+ + +SRD+TNP LP
Sbjct: 263 EYSKLTNLNVKYNNDKSRDFTNPTLPTGDPTLDIGLAGSLGILASPFAAAGPGLTSPLTA 322
Query: 113 --------------------APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTL 152
APSA A G + L G+ S VLL S N Q VT
Sbjct: 323 AYAASATAGLPLGGFALSPSAPSAATALGMAGIRLPGQ--ATTSCVLLVSNLNEQM-VTP 379
Query: 153 DVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 202
D L +F +G V ++ +F+K ALIQ + Q A +A L+ +Y
Sbjct: 380 DALFTLFGVYGDVIRVKILFNKKD--SALIQMAEPQQAQLAMSHLDKIKVY 428
>gi|157838029|ref|NP_001093477.1| polypyrimidine tract-binding protein 2 [Danio rerio]
Length = 538
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL I+NM Y VTLDVL +FS FG V KI F KN QAL+Q+ D A AK +L+
Sbjct: 174 VLRIIIDNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLD 233
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQP 243
G IY+ C L I +S+ +L++K NND+SRDYT P P + QP
Sbjct: 234 GQNIYN-SCCTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQP 278
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 110/263 (41%), Gaps = 61/263 (23%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+QFSD A AK +LDG++I CTLR
Sbjct: 193 QIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNSC-------CTLR 245
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA------------------------------- 113
I +S +L+VK+ + +SRDYT P LP
Sbjct: 246 IDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPPVDPSMAAALSKDSPSLLGTPSGMVTS 305
Query: 114 -------PSAIDASGQLS-----------VGLDGKKLEPESNVLLASIENMQYAVTLDVL 155
PS++ A LS V L G + VLL S N + VT L
Sbjct: 306 YSSGGGFPSSLGAISPLSAAAAAAAAAGRVALSGHSV--PGGVLLVSNLNDEM-VTPQSL 362
Query: 156 HMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSR 215
+F +G VQ++ + N ALIQ D A +A L G +Y G ++ +S +
Sbjct: 363 FTLFGVYGDVQRVKIL-YNKKDSALIQMSDGNQAQLAMSHLNGQKMY-GKIIRVTLSKHQ 420
Query: 216 HTDLSIKVNNDRSRDYTLPSTPM 238
L + +D+ S+P+
Sbjct: 421 TVQLPREGLDDQGLTKDFTSSPL 443
>gi|395514526|ref|XP_003761466.1| PREDICTED: polypyrimidine tract-binding protein 3 [Sarcophilus
harrisii]
Length = 505
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 79/130 (60%), Gaps = 5/130 (3%)
Query: 120 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 175
SG L++ G +G L +S VL +EN+ Y V+L+VL+ +FS FG V +I F KN
Sbjct: 138 SGSLALPAAQGNEGGVLPGQSPVLRIIVENLFYPVSLEVLYQIFSKFGTVLRIITFTKNN 197
Query: 176 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 198 QFQALLQYADPLNAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLD 256
Query: 236 TPMVNSQPSI 245
P + QPSI
Sbjct: 257 LPSGDGQPSI 266
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 98/206 (47%), Gaps = 38/206 (18%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V +I TF K FQAL+Q++D A AK ALDG++I CTLR
Sbjct: 179 QIFSKFGTVLRIITFTKNNQFQALLQYADPLNAHYAKMALDGQNIYN-------ACCTLR 231
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP------------------VAPSAIDASGQLSV- 125
I +S T L+VK+ + +SRD+T LP P+ A G L++
Sbjct: 232 IDFSKLTSLNVKYNNDKSRDFTRLDLPSGDGQPSIDPTMAAAFGLSVPAVPGALGPLTIT 291
Query: 126 --------GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDKNGG 176
+ G P ++VLL S N A+T L ++F +G VQ++ MF+K
Sbjct: 292 TSAVTGRMAIPGVPGVPGNSVLLVSNLNPD-AITPHGLFILFGVYGDVQRVKIMFNKKE- 349
Query: 177 LQALIQYPDVQTAVVAKEALEGHCIY 202
AL+Q D A +A L G +Y
Sbjct: 350 -NALVQMADANQAQLAINHLSGQRLY 374
>gi|302782650|ref|XP_002973098.1| hypothetical protein SELMODRAFT_173175 [Selaginella moellendorffii]
gi|302790002|ref|XP_002976769.1| hypothetical protein SELMODRAFT_105564 [Selaginella moellendorffii]
gi|300155807|gb|EFJ22438.1| hypothetical protein SELMODRAFT_105564 [Selaginella moellendorffii]
gi|300158851|gb|EFJ25472.1| hypothetical protein SELMODRAFT_173175 [Selaginella moellendorffii]
Length = 436
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 103/215 (47%), Gaps = 46/215 (21%)
Query: 30 FGFVHKITTFEKTAGFQALVQFSDTETASSAKN-------ALDGRSIPRYLLPENMGPCT 82
FG V K+ QAL+Q D A SA ++ GR++
Sbjct: 29 FGSVSKMVLLRTKN--QALLQMQDVNAAISAMQYYTSVQPSVRGRNV------------- 73
Query: 83 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 142
I +S+H +L+ Q+ T P P G + + + +LL +
Sbjct: 74 -YIQFSSHQELTTSDQA------TQPRRPA----------------GDQDQQPNRILLVT 110
Query: 143 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 202
I + Y +T+DVLH VF+ G V+KI F K+ GLQALIQY + Q+AV AK L+G IY
Sbjct: 111 IHHPLYPITVDVLHQVFNPHGHVEKIVTFQKSAGLQALIQYNNQQSAVYAKSLLQGRNIY 170
Query: 203 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
DG C L I +S +L + NN+R+RDYT S P
Sbjct: 171 DGC-CTLDIQFSNLQELQVNFNNERTRDYTNSSLP 204
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 106/218 (48%), Gaps = 39/218 (17%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VF+ G V KI TF+K+AG QAL+Q+++ ++A AK+ L GR+I G CTL I
Sbjct: 126 VFNPHGHVEKIVTFQKSAGLQALIQYNNQQSAVYAKSLLQGRNIYD-------GCCTLDI 178
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAP----------------------SAIDASGQL 123
+S +L V F + R+RDYTN LP P +A + G L
Sbjct: 179 QFSNLQELQVNFNNERTRDYTNSSLPNEPGRSQNPPGGNNMMVPMTPSAAAAAAASGGTL 238
Query: 124 SVGLDGKKLEPESNVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQ 182
G+ G E LL S N+ V D L +FS +G + +I M N ALIQ
Sbjct: 239 PPGVTGTN---ERCTLLVS--NLAPEKVDADKLFNLFSNYGNIIRIKML-HNKPDHALIQ 292
Query: 183 YPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 220
D A +A L G +++ ++ +++S+H+ ++
Sbjct: 293 MGDGYQAELAVYYLRGTMLFEK---RMEVNFSKHSQIN 327
>gi|345496639|ref|XP_001603240.2| PREDICTED: polypyrimidine tract-binding protein 1-like [Nasonia
vitripennis]
Length = 587
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 129/259 (49%), Gaps = 37/259 (14%)
Query: 19 ASGERAHVFSAFGFVHKITTFEKTAGFQALVQFSDTETAS-------SAKNALDGRSIPR 71
+ GE H+ FG V + + QA ++ +D +A+ S L GR++
Sbjct: 87 SEGEIIHLGMPFGRVTNVLVLKGKN--QAFLEMADEGSAATMVTYCASCPAQLRGRAV-- 142
Query: 72 YLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSA----IDASGQLSVGL 127
+ +S H +L Q H + +P +A ++ + A+GQ V
Sbjct: 143 ------------YVQFSNHRELKTD-QGHNNA-VGSPTNAIANTSNNTSVQAAGQGQVQG 188
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
+ P + VL +E+ Y ++LDVL+ +F+ +G V KI F KNG QALIQY D+
Sbjct: 189 SETQGGPNT-VLRVIVEHQIYPISLDVLYQIFTRYGKVLKIVTFTKNGTFQALIQYADML 247
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM----VNSQP 243
+A AK L+G IY+ C L I YS+ +L++K NND+SRDYT P+ P +++
Sbjct: 248 SAQTAKFNLDGQNIYN-SCCTLRIDYSKMQNLNVKYNNDKSRDYTNPTLPTGDANLDAAS 306
Query: 244 SILGQQPVP--MVGATANQ 260
LG + +P ++GA +Q
Sbjct: 307 LALGGELLPQLLLGAAGSQ 325
>gi|334332915|ref|XP_001376108.2| PREDICTED: regulator of differentiation 1 [Monodelphis domestica]
Length = 582
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 120 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 175
SG L++ G +G L +S VL +EN+ Y VTL+VL+ +FS FG V +I F KN
Sbjct: 189 SGSLALTAAPGSEGGVLPGQSPVLRIIVENLFYPVTLEVLYQIFSKFGTVLRIITFTKNN 248
Query: 176 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
QAL+QY D A AK L+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 249 QFQALLQYADPLNAHYAKMTLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLD 307
Query: 236 TPMVNSQPSI 245
P + QPS+
Sbjct: 308 LPSGDGQPSL 317
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V +I TF K FQAL+Q++D A AK LDG++I CTLR
Sbjct: 230 QIFSKFGTVLRIITFTKNNQFQALLQYADPLNAHYAKMTLDGQNIYNAC-------CTLR 282
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
I +S T L+VK+ + +SRD+T LP
Sbjct: 283 IDFSKLTSLNVKYNNDKSRDFTRLDLP 309
>gi|354498135|ref|XP_003511171.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Cricetulus
griseus]
gi|344255182|gb|EGW11286.1| Polypyrimidine tract-binding protein 1 [Cricetulus griseus]
Length = 575
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN Y VTL+VLH +FS FG V KI ++ KN Q L+QY +
Sbjct: 188 GTAVARQSPVLRILVENYFYQVTLEVLHQLFSRFGTVLKIIIYSKNSRFQVLLQYAHPLS 247
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQP 243
A AK L+G IYD C L I++S TDL++K NN++SRDYT P P +SQP
Sbjct: 248 AQRAKLFLDGQNIYD-ACCTLRIAFSGLTDLTVKYNNEKSRDYTRPDLPSGDSQP 301
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 118/277 (42%), Gaps = 75/277 (27%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI + K + FQ L+Q++ +A AK LDG++I CTLR
Sbjct: 216 QLFSRFGTVLKIIIYSKNSRFQVLLQYAHPLSAQRAKLFLDGQNIYD-------ACCTLR 268
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPV----------------APSAIDAS-------- 120
I +S TDL+VK+ + +SRDYT P LP AP I AS
Sbjct: 269 IAFSGLTDLTVKYNNEKSRDYTRPDLPSGDSQPLPAQKMTTAFGAPVVIAASPHASPGVP 328
Query: 121 -----GQLSVGLD----GKKLEP---------------------------ESNVLLASIE 144
Q++ GL K L P + VLL +
Sbjct: 329 HTFAFSQVAAGLAMPEVCKALAPLAVPEVVVAAAAAAAESTVVTSGSPGGANAVLLVANL 388
Query: 145 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 204
N + VT L ++F A+G VQ++ + N AL+Q D A +A + L GH ++
Sbjct: 389 NPE-KVTPQSLFILFGAYGNVQRVKIL-YNRKENALVQMADGCQAELALKHLNGHKLHGK 446
Query: 205 GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS 241
C I S+H LS+K+ + D L + VNS
Sbjct: 447 SLC---IMPSKH--LSVKLPREGKEDQGL-TKDYVNS 477
>gi|350583628|ref|XP_003125947.3| PREDICTED: polypyrimidine tract-binding protein 2-like [Sus scrofa]
Length = 345
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
M Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK AL+G IY+
Sbjct: 1 MYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNAC 60
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 61 -CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 99
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 101/223 (45%), Gaps = 46/223 (20%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLR
Sbjct: 12 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLR 64
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDAS-----------GQLS--- 124
I +S +L+VK+ + +SRDYT P LP AI A+ G LS
Sbjct: 65 IDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLA 124
Query: 125 ---------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 169
VG+ G + +L++++ + VT L +F +G VQ++
Sbjct: 125 IPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVK 182
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 212
+ N ALIQ D + +A L G +Y G ++ +S
Sbjct: 183 IL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 223
>gi|410904361|ref|XP_003965660.1| PREDICTED: polypyrimidine tract-binding protein 3-like [Takifugu
rubripes]
Length = 481
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 108/216 (50%), Gaps = 30/216 (13%)
Query: 30 FGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR----- 84
FG V K+ T + A Q ++ + E A + N P T+R
Sbjct: 50 FGRVSKLITLK--AKNQGFLEMASEEAAVTMMNYYTS------------APPTIRNQPVF 95
Query: 85 ITYSAHTDLSVKFQSHRSRDYTN--PYLPVAPSAIDASGQLSVGLDGKKL-EPESNVLLA 141
I YS H +L ++ + TN L +A SG ++ G DG+ + +S VL
Sbjct: 96 IQYSNHREL-------KTDNLTNQRAALQAISTAAMHSGTMAPGSDGRGVVHGQSPVLRI 148
Query: 142 SIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCI 201
+EN+ Y VTL+VL +FS FG V KI F +N QAL+Q+ D A AK +L+G I
Sbjct: 149 IVENLFYPVTLEVLQQIFSKFGSVLKIITFTRNNQFQALLQFSDAVHAQHAKASLDGQNI 208
Query: 202 YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
Y+G C L I +S+ + L++K NND+SRD+T P
Sbjct: 209 YNGC-CTLRIDFSKLSALNVKYNNDKSRDFTRSDLP 243
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 103/205 (50%), Gaps = 28/205 (13%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF + FQAL+QFSD A AK +LDG++I G CTLR
Sbjct: 164 QIFSKFGSVLKIITFTRNNQFQALLQFSDAVHAQHAKASLDGQNIYN-------GCCTLR 216
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLD-----GKKLEPES--- 136
I +S + L+VK+ + +SRD+T LP A+ LS GL G + P
Sbjct: 217 IDFSKLSALNVKYNNDKSRDFTRSDLPTGELDPTAAFTLSPGLSVAAVPGSLMSPPRVSL 276
Query: 137 --------NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQ 187
+VLL S N + +V+ L ++F +G VQ++ +F+K AL+Q D
Sbjct: 277 QMAPPAIHSVLLVSNLNPE-SVSPQCLFILFGVYGDVQRVKILFNKKEN--ALVQMSDAT 333
Query: 188 TAVVAKEALEGHCIYDGGFCKLHIS 212
A +A L G ++ G ++ +S
Sbjct: 334 QAQLAMSHLNGQRLH-GNVIRVMLS 357
>gi|223647466|gb|ACN10491.1| Polypyrimidine tract-binding protein 2 [Salmo salar]
Length = 540
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL I+NM Y VTLDVL +FS FG V KI F KN QAL+Q+ + A A+ +L+
Sbjct: 173 VLRIIIDNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSEPVNAQQARLSLD 232
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 233 GQNIYN-SCCTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPAV 279
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 109/260 (41%), Gaps = 62/260 (23%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+QFS+ A A+ +LDG++I CTLR
Sbjct: 192 QIFSKFGTVMKIITFTKNNQFQALLQFSEPVNAQQARLSLDGQNIYN-------SCCTLR 244
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPV-----------------------------APS 115
I +S +L+VK+ + +SRDYT P LP AP
Sbjct: 245 IDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPAVDPAMAAAYNKDSSLLGTPSGMGAPY 304
Query: 116 AIDASGQLSVGLDGKKLEPE---------------------SNVLLASIENMQYAVTLDV 154
+ Q S+ G + P S VLL S N + VT
Sbjct: 305 SNGGGFQSSLSQGGGAINPMSAAAAAAAAAGRMALSGHSGCSGVLLVSNLN-EEMVTPQS 363
Query: 155 LHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYS 214
L +F +G Q++ + N ALIQ D A +A L G +Y G ++ +S
Sbjct: 364 LFTLFGVYGDAQRVKIL-YNKKDSALIQMSDGNQAQLAMSHLNGQKMY-GKIIRVTLSKH 421
Query: 215 RHTDLSIKVNNDR--SRDYT 232
+ L + +D+ ++D+T
Sbjct: 422 QAVQLPREGLDDQGLTKDFT 441
>gi|156392443|ref|XP_001636058.1| predicted protein [Nematostella vectensis]
gi|156223157|gb|EDO43995.1| predicted protein [Nematostella vectensis]
Length = 470
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 16/206 (7%)
Query: 46 QALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHR--SR 103
QA ++ E A + N+ Y+ P G + I YS H +L+ H R
Sbjct: 40 QAFLEMKTKENAMALMNSYS------YIPPSIRGR-QIYIQYSNHQELTTNESQHSPGVR 92
Query: 104 DYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFG 163
++ +L ++ + +G+ G+ +L +ENM Y +T++VL+ +F+ +G
Sbjct: 93 GLSSSHLGAGIGSLTSG----LGIAGELPSVNGCILRIIVENMLYPITIEVLNQIFTKYG 148
Query: 164 PVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKV 223
V KI +F +N QAL+Q+ A AK +L+G IY+ G C L I YS+ LS+K
Sbjct: 149 TVLKIVIFTRNNQFQALVQFSQSTEARAAKCSLDGQNIYN-GCCTLRIDYSKLKTLSVKY 207
Query: 224 NNDRSRDYTLPSTPMVNS--QPSILG 247
NND++RDYT P P S PS LG
Sbjct: 208 NNDKTRDYTRPDLPSGESTPDPSALG 233
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 107/228 (46%), Gaps = 43/228 (18%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F+ +G V KI F + FQALVQFS + A +AK +LDG++I G CTLR
Sbjct: 142 QIFTKYGTVLKIVIFTRNNQFQALVQFSQSTEARAAKCSLDGQNIYN-------GCCTLR 194
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKL-EPESNVL---- 139
I YS LSVK+ + ++RDYT P LP S D S GL L P + +
Sbjct: 195 IDYSKLKTLSVKYNNDKTRDYTRPDLPSGESTPDPSALGFAGLGTSVLGSPAALLGFPGL 254
Query: 140 ------------------------LASIENM-QYAVTLDVLHMVFSAFGPVQKIA-MFDK 173
L + N+ + ++ D L +F +G VQ++ +F+K
Sbjct: 255 GGLPLANLASLANAAPQRMPMGSPLVLVSNLNEEMISCDALFTLFGCYGDVQRVKILFNK 314
Query: 174 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
AL+Q+ +V A A L G ++ ++ ++ S+HT +S+
Sbjct: 315 KD--TALVQFANVHQAQTAIGHLNGVRVFGK---EMKVTNSKHTSVSL 357
>gi|432915659|ref|XP_004079197.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Oryzias
latipes]
Length = 523
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 70/119 (58%), Gaps = 6/119 (5%)
Query: 134 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 193
P S VL I+NM Y VTLDVL +FS FG V KI F KN QAL+Q+ D A AK
Sbjct: 160 PPSPVLRIIIDNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAK 219
Query: 194 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM-----VNSQPSILG 247
+L+G IY+ C L I +S+ +L++K NND+SRDYT P P N S+LG
Sbjct: 220 LSLDGQNIYN-SCCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPTGDGDSANKDHSLLG 277
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 105/244 (43%), Gaps = 64/244 (26%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+QFSD A AK +LDG++I CTLR
Sbjct: 183 QIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYN-------SCCTLR 235
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDA-----------SGQLS--------- 124
I +S +L+VK+ + +SRDYT P LP D+ SG L+
Sbjct: 236 IDFSKLVNLNVKYNNDKSRDYTRPDLPTGDG--DSANKDHSLLGTPSGALASYSSGGSYS 293
Query: 125 ---------------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHM 157
V L G + S VLLAS N + VT L
Sbjct: 294 SSLSLSQGGGAISPLSAAAAAAAAAGRVALSGSGV---SGVLLASNLN-EEMVTPQSLFT 349
Query: 158 VFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHT 217
+F +G VQ++ + N ALIQ D A +A L G ++ + ++ S+H
Sbjct: 350 LFGVYGDVQRVKIL-YNKKDSALIQLSDGNQAQLAMSHLNGQKVFGK---VMRVTLSKHQ 405
Query: 218 DLSI 221
+++
Sbjct: 406 TVAL 409
>gi|328867981|gb|EGG16362.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 656
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 77/116 (66%), Gaps = 3/116 (2%)
Query: 132 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
+E +N+LL +I N+ Y VT++VL+ +F +G V KI +F K+G Q+L+Q +++A+
Sbjct: 332 VETPNNILLVTISNIVYPVTIEVLYQLFGKYGSVLKILIFSKSGNFQSLVQLHSLESAIQ 391
Query: 192 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 247
AK L+G IY G C + I YS ++L IK NND+SRD+T P+ +++ PS +G
Sbjct: 392 AKRELDGQSIYSGC-CTMKIQYSSLSNLRIKYNNDKSRDFTNPT--LMSGIPSTIG 444
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 61/104 (58%), Gaps = 12/104 (11%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+F +G V KI F K+ FQ+LVQ E+A AK LDG+SI G CT++
Sbjct: 357 QLFGKYGSVLKILIFSKSGNFQSLVQLHSLESAIQAKRELDGQSIYS-------GCCTMK 409
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA-PSAI----DASGQL 123
I YS+ ++L +K+ + +SRD+TNP L PS I +++GQL
Sbjct: 410 IQYSSLSNLRIKYNNDKSRDFTNPTLMSGIPSTIGFGNNSAGQL 453
>gi|168017642|ref|XP_001761356.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687362|gb|EDQ73745.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 441
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 119/245 (48%), Gaps = 46/245 (18%)
Query: 19 ASGERAHVFSAFGFVHKITTFEKTAGFQALVQFSDTETA-------SSAKNALDGRSIPR 71
A + + +FG V K+ A QAL+Q D +A ++ + ++ GR++
Sbjct: 18 AESDLLQLAQSFGVVQKVVMLR--AKNQALLQMQDVPSAINVMQYYTTVQPSVRGRNV-- 73
Query: 72 YLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKK 131
+ +S+H +L+ Q+ ++R LP ++
Sbjct: 74 ------------YMQFSSHKELTTPDQNGQTRR-----LPAE----------------QE 100
Query: 132 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
L P + +LL +I N Y +T+DVLH VFS G V+KI F K+ GLQAL+QY +AV
Sbjct: 101 LLP-NRILLITIHNPLYPITVDVLHQVFSPHGFVEKIVTFTKSAGLQALLQYASQPSAVQ 159
Query: 192 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPV 251
A+ L+G IYDG C L I YS +L + NN+R+RD+T + P S+P G +
Sbjct: 160 ARTTLQGRNIYDGC-CTLDIQYSNLQELQVNYNNERTRDFTNAALPSEQSRPGNSGNNIM 218
Query: 252 PMVGA 256
++G
Sbjct: 219 VLLGC 223
>gi|168012956|ref|XP_001759167.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689480|gb|EDQ75851.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 76/126 (60%), Gaps = 2/126 (1%)
Query: 118 DASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL 177
D SGQ ++L P + +LL +I N Y +T+DVLH VFS G V+KI F K+ GL
Sbjct: 64 DQSGQTRRLPAEQELLP-NRILLITIHNPLYPITVDVLHQVFSPHGFVEKIVTFTKSAGL 122
Query: 178 QALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
QAL+QY +AV A+ L+G IYDG C L I YS +L + NN+R+RD+T + P
Sbjct: 123 QALLQYASQSSAVQARSTLQGRNIYDGC-CTLDIQYSNLQELQVNYNNERTRDFTNAALP 181
Query: 238 MVNSQP 243
S+P
Sbjct: 182 SEQSRP 187
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 34/215 (15%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
VFS GFV KI TF K+AG QAL+Q++ +A A++ L GR+I G CTL
Sbjct: 102 QVFSPHGFVEKIVTFTKSAGLQALLQYASQSSAVQARSTLQGRNIYD-------GCCTLD 154
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQ-------------------LSV 125
I YS +L V + + R+RD+TN LP S G L
Sbjct: 155 IQYSNLQELQVNYNNERTRDFTNAALPSEQSRPGNPGNNIMVAMGGASAAAAAFGGVLPP 214
Query: 126 GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD 185
G+ G S +L++++ + + D L +FS +G + +I + N ALIQ D
Sbjct: 215 GITGTN--DRSTLLVSNL--VPEKIDADRLFNLFSNYGNIVRIKIL-HNKPDHALIQMGD 269
Query: 186 VQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 220
A +A L+G ++ ++ +++S+H ++
Sbjct: 270 GFQAELAFNYLKGVTLFGK---RMDVNFSKHAQIN 301
>gi|440804444|gb|ELR25321.1| hnRNPL/PTB/hephaestus splicing factor subfamily protein
[Acanthamoeba castellanii str. Neff]
Length = 575
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Query: 133 EPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVA 192
E +++LL ++ N+ Y VT+D+LH VFS +G + KI +F K G QALIQ D A A
Sbjct: 202 EQSNHILLVTVTNLVYPVTIDILHQVFSKYGAIHKIVIFSKK-GFQALIQMGDKNQAQAA 260
Query: 193 KEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
K+AL+G IY G C L I YS L++K NND+SRD+T + P ++ +GQ
Sbjct: 261 KQALDGQNIYSGC-CTLRIQYSNLPSLNVKYNNDKSRDFTNNNLPSGDAAGPAVGQ 315
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 112/243 (46%), Gaps = 50/243 (20%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFS +G +HKI F K GFQAL+Q D A +AK ALDG++I G CTLRI
Sbjct: 227 VFSKYGAIHKIVIFSKK-GFQALIQMGDKNQAQAAKQALDGQNIYS-------GCCTLRI 278
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLD--GKKLEPESN------ 137
YS L+VK+ + +SRD+TN LP +A A GQ L+ G L P+++
Sbjct: 279 QYSNLPSLNVKYNNDKSRDFTNNNLPSGDAAGPAVGQFGGALNPLGLGLFPDASYGGYHV 338
Query: 138 ------------------------VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDK 173
+++ +E + VT DVL +F +G V ++ +
Sbjct: 339 SPAAFGYGQKQGAVGMAMGMGPSVLIVNGLEAER--VTPDVLFTLFGVYGDVLRVKIL-Y 395
Query: 174 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDR----SR 229
N AL+Q+ Q A A L ++ L I++S+H +++ ++
Sbjct: 396 NKTDTALVQFATPQQAETALANLNQAPLFGR---TLTINFSKHNTIAMPREGTEGAHLTK 452
Query: 230 DYT 232
DYT
Sbjct: 453 DYT 455
>gi|313234966|emb|CBY24911.1| unnamed protein product [Oikopleura dioica]
Length = 788
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 115/255 (45%), Gaps = 39/255 (15%)
Query: 24 AHVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG-RSIPRYLLPENMGPCT 82
H+FS FG V K+ TF K FQAL+Q A + K +G R + LP+++
Sbjct: 274 THLFSQFGNVLKVITFTKNNQFQALIQMDCESNAQAMKTEDEGSRVLHVRGLPDDVTEHE 333
Query: 83 L-RITYSAHT-DLSVKFQSHRSRDYT-------------NPYLPVAPSAI---------- 117
+ ++ T L V F +S++ Y + P I
Sbjct: 334 IWKLVLPFKTLGLMVNFMHLKSKNQAFLEVDNIEMAREMAQYYLLNPPCIRQRTIHLQFS 393
Query: 118 --------DASGQLSVGLDGKKLEP----ESNVLLASIENMQYAVTLDVLHMVFSAFGPV 165
++ Q + +D +K + ++VL +ENM Y TL+VL +FS FG V
Sbjct: 394 NHKQLSPPSSALQEKLLMDLRKFQEAEGGSNHVLRVVVENMTYPTTLEVLTHLFSQFGNV 453
Query: 166 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN 225
K+ F KN QALIQ A AK +L+G +Y C L I YS+ L++K NN
Sbjct: 454 LKVITFTKNNQFQALIQMDCESNAQAAKLSLDGKNVYTNC-CTLRIDYSKLQQLNVKFNN 512
Query: 226 DRSRDYTLPSTPMVN 240
++SRDYT P P +
Sbjct: 513 EKSRDYTRPELPQCD 527
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 34/63 (53%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
++VL +ENM Y TL+VL +FS FG V K+ F KN QALIQ A K
Sbjct: 254 NHVLRVVVENMTYPTTLEVLTHLFSQFGNVLKVITFTKNNQFQALIQMDCESNAQAMKTE 313
Query: 196 LEG 198
EG
Sbjct: 314 DEG 316
>gi|241997960|ref|XP_002433623.1| polypyrimidine tract binding protein, putative [Ixodes scapularis]
gi|215495382|gb|EEC05023.1| polypyrimidine tract binding protein, putative [Ixodes scapularis]
Length = 512
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL ++N Y V+LD+LH +FS G V KI F K+ QALIQ+ DV A AK AL+
Sbjct: 173 VLRVVVDNQIYPVSLDLLHGIFSRAGKVLKIVTFTKSNTFQALIQFSDVMGAQAAKLALD 232
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
G IY+ C L I YS+ T+L++K NND+SRD+T P+ P
Sbjct: 233 GQSIYN-ACCTLRIEYSKLTNLNVKYNNDKSRDFTNPTLP 271
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 100/194 (51%), Gaps = 32/194 (16%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+FS G V KI TF K+ FQAL+QFSD A +AK ALDG+SI CTLRI
Sbjct: 193 IFSRAGKVLKIVTFTKSNTFQALIQFSDVMGAQAAKLALDGQSIYN-------ACCTLRI 245
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDA------------------SGQLSVGL 127
YS T+L+VK+ + +SRD+TNP LP +D S ++G+
Sbjct: 246 EYSKLTNLNVKYNNDKSRDFTNPTLPTGDPTLDNLGLAGLPLGGFALSPSNPSAATALGM 305
Query: 128 DGKKLEPE---SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQY 183
G +L + S VLL S N Q VT D L +F +G V ++ +F+K ALIQ
Sbjct: 306 AGIRLPGQGTASCVLLVSNLNEQM-VTPDALFTLFGVYGDVIRVKILFNKKDS--ALIQM 362
Query: 184 PDVQTAVVAKEALE 197
+ Q A +A L+
Sbjct: 363 AEPQQAQLAMSHLD 376
>gi|348531446|ref|XP_003453220.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Oreochromis
niloticus]
Length = 523
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 70/119 (58%), Gaps = 6/119 (5%)
Query: 134 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 193
P S VL I+NM Y VTLDVL +FS FG V KI F KN QAL+Q+ D A AK
Sbjct: 160 PPSPVLRIIIDNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAK 219
Query: 194 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM-----VNSQPSILG 247
+L+G IY+ C L I +S+ ++++K NND+SRDYT P P N S+LG
Sbjct: 220 LSLDGQNIYN-SCCTLRIDFSKLVNVNVKYNNDKSRDYTRPDLPTGDGESTNKDHSLLG 277
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 103/242 (42%), Gaps = 60/242 (24%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+QFSD A AK +LDG++I CTLR
Sbjct: 183 QIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYN-------SCCTLR 235
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDA---------SGQLS----------- 124
I +S +++VK+ + +SRDYT P LP SG L+
Sbjct: 236 IDFSKLVNVNVKYNNDKSRDYTRPDLPTGDGESTNKDHSLLGTPSGALASYSSGGGYSSS 295
Query: 125 -------------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVF 159
V L G + S VLLAS N + VT L +F
Sbjct: 296 LSLSQGGGAISPLSAAAAAAAAAGRVALSGSGV---SGVLLASNLN-EEMVTPQSLFTLF 351
Query: 160 SAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDL 219
+G VQ++ + N ALIQ D A +A L G ++ + ++ S+H +
Sbjct: 352 GVYGDVQRVKIL-YNKKDSALIQLSDGNQAQLAMSHLNGQKVFGK---VMRVTLSKHQTV 407
Query: 220 SI 221
++
Sbjct: 408 AL 409
>gi|196010463|ref|XP_002115096.1| hypothetical protein TRIADDRAFT_28601 [Trichoplax adhaerens]
gi|190582479|gb|EDV22552.1| hypothetical protein TRIADDRAFT_28601, partial [Trichoplax
adhaerens]
Length = 476
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 69/108 (63%), Gaps = 2/108 (1%)
Query: 134 PES-NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVA 192
PE+ VL SI+N+ Y VTLD+L+ +FS FG V+KI F KN QALIQ+ D A A
Sbjct: 120 PEAGRVLHISIDNLVYPVTLDILNQIFSKFGVVEKIITFTKNNLYQALIQFTDAVDAQNA 179
Query: 193 KEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVN 240
K +L+G IY G C L I YS+ +++K NND+SRD+T T +N
Sbjct: 180 KLSLDGQSIY-YGCCTLKIDYSKLLSINVKYNNDKSRDFTKNVTTRIN 226
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 106/232 (45%), Gaps = 47/232 (20%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K +QAL+QF+D A +AK +LDG+SI G CTL+
Sbjct: 144 QIFSKFGVVEKIITFTKNNLYQALIQFTDAVDAQNAKLSLDGQSIY-------YGCCTLK 196
Query: 85 ITYSAHTDLSVKFQSHRSRDYT-NPYLPVAPSAIDASGQLSVGL---------DGKKLEP 134
I YS ++VK+ + +SRD+T N + P+A S + V L+
Sbjct: 197 IDYSKLLSINVKYNNDKSRDFTKNVTTRINPTAGATSIAIPVATILSPLTAIATTSPLQS 256
Query: 135 ESNVLLASIE------NMQY------------------AVTLDVLHMVFSAFGPVQKIA- 169
S++L A I+ N+ Y VT L ++F +G V ++
Sbjct: 257 TSDLLTAPIQQQLSEGNLGYDNSSYVGSVIHVTNLNEAKVTPRALFILFGVYGDVYRVKI 316
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
+F+K ALIQ + A A L G +Y K+ +S S++ + +
Sbjct: 317 LFNKKD--TALIQMAEPHQAQTAIAHLHGIQLYGK---KMFVSSSKYAQVQL 363
>gi|301103606|ref|XP_002900889.1| polypyrimidine tract-binding protein, putative [Phytophthora
infestans T30-4]
gi|262101644|gb|EEY59696.1| polypyrimidine tract-binding protein, putative [Phytophthora
infestans T30-4]
Length = 655
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 77/124 (62%), Gaps = 6/124 (4%)
Query: 118 DASGQLSV-GLDG--KKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN 174
D GQL + +DG + + P + +L+ S+ ++Y VT+DVL VF FG VQKI F K+
Sbjct: 146 DNGGQLGLLPIDGPRRGIGPPNQILMVSVSKIEYDVTVDVLQQVFQKFGNVQKIVTFWKD 205
Query: 175 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFC-KLHISYSRHTDLSIKVNNDRSRDYTL 233
++L+Q V A A+ AL+G IY G C +L I +SRH +L ++ N+DRSRDYT
Sbjct: 206 NEFKSLVQMESVDQAQAAQSALDGRDIYTG--CNQLSIVFSRHPELRVRYNDDRSRDYTN 263
Query: 234 PSTP 237
P+ P
Sbjct: 264 PNLP 267
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 63/126 (50%), Gaps = 15/126 (11%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
VF FG V KI TF K F++LVQ + A +A++ALDGR I G L
Sbjct: 188 QVFQKFGNVQKIVTFWKDNEFKSLVQMESVDQAQAAQSALDGRDI-------YTGCNQLS 240
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIE 144
I +S H +L V++ RSRDYTNP LP P G D + EP + +L E
Sbjct: 241 IVFSRHPELRVRYNDDRSRDYTNPNLPPGPG--------RGGDDRNEGEPATTILSDRRE 292
Query: 145 NMQYAV 150
QY++
Sbjct: 293 PPQYSI 298
>gi|390332444|ref|XP_003723502.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 5
[Strongylocentrotus purpuratus]
Length = 555
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ +L +EN+ Y +T+D LH +F +G V +I F K+G QAL+Q+ D A VAK
Sbjct: 212 NTILRVIVENVTYQITVDTLHEIFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLE 271
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 232
L+G IY+ C+L I +S+ T+LS+K NN++SRDYT
Sbjct: 272 LDGKNIYN-NCCQLRIDFSKLTNLSVKYNNEKSRDYT 307
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 104/217 (47%), Gaps = 40/217 (18%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+F +G V +I TF K+ FQALVQFSD A+ AK LDG++I C LRI
Sbjct: 234 IFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLELDGKNIYN-------NCCQLRI 286
Query: 86 TYSAHTDLSVKFQSHRSRDYTN---------------------PYLPVAPSAI---DASG 121
+S T+LSVK+ + +SRDYT P P SA+ A+
Sbjct: 287 DFSKLTNLSVKYNNEKSRDYTCDLPQGDGLTGVDPSTAAMLGVPGFPAGLSALPHHAAAA 346
Query: 122 QLSVGLDGKKLEPESNVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIA-MFDKNGGLQA 179
+ + G + S+V+L S N+ VT L +F +G VQ++ +++K A
Sbjct: 347 AQGMRMPGMYMPSGSSVILVS--NLTPELVTPQALFTLFGVYGDVQRVKILYEKRDN--A 402
Query: 180 LIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 216
LIQ D + +A + L G +Y ++ ++ S+H
Sbjct: 403 LIQMSDPNQSQLAMKHLSGVKLYGK---QIRVTASKH 436
>gi|115634663|ref|XP_001176080.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 1
[Strongylocentrotus purpuratus]
Length = 617
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ +L +EN+ Y +T+D LH +F +G V +I F K+G QAL+Q+ D A VAK
Sbjct: 240 NTILRVIVENVTYQITVDTLHEIFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLE 299
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 232
L+G IY+ C+L I +S+ T+LS+K NN++SRDYT
Sbjct: 300 LDGKNIYN-NCCQLRIDFSKLTNLSVKYNNEKSRDYT 335
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 7/81 (8%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+F +G V +I TF K+ FQALVQFSD A+ AK LDG++I C LRI
Sbjct: 262 IFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLELDGKNIYNNC-------CQLRI 314
Query: 86 TYSAHTDLSVKFQSHRSRDYT 106
+S T+LSVK+ + +SRDYT
Sbjct: 315 DFSKLTNLSVKYNNEKSRDYT 335
>gi|363744882|ref|XP_424912.3| PREDICTED: regulator of differentiation 1 [Gallus gallus]
Length = 552
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 93/191 (48%), Gaps = 33/191 (17%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
S+VL IEN+ Y V+L+VL+ +FS FG V KI F +N QALIQY + A AK A
Sbjct: 197 SSVLRIIIENLFYPVSLEVLYQIFSKFGFVLKIVTFTRNNQFQALIQYAEPVNAYYAKMA 256
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPV--PM 253
L G IY+ C LHI +S+ T L +K NN++SRD+T P + GQ P+ +
Sbjct: 257 LNGRNIYNAC-CTLHIDFSKLTSLKVKYNNEKSRDFTRFDLPAAD------GQLPLDPAI 309
Query: 254 VGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMGPG 313
+ A +Q G F P G G + P + Y P G++
Sbjct: 310 IAAFGSQ--GIIFQP------------YVGTGGIGPVT----------YFPQGAVTTSVA 345
Query: 314 MMQMHMPGQSG 324
++M PG G
Sbjct: 346 SVRMSNPGVPG 356
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 118/247 (47%), Gaps = 51/247 (20%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FGFV KI TF + FQAL+Q+++ A AK AL+GR+I CTL
Sbjct: 218 QIFSKFGFVLKIVTFTRNNQFQALIQYAEPVNAYYAKMALNGRNIYN-------ACCTLH 270
Query: 85 ITYSAHTDLSVKFQSHRSRDYT-------NPYLPVAPSAIDA------------------ 119
I +S T L VK+ + +SRD+T + LP+ P+ I A
Sbjct: 271 IDFSKLTSLKVKYNNEKSRDFTRFDLPAADGQLPLDPAIIAAFGSQGIIFQPYVGTGGIG 330
Query: 120 ------SGQLSVGLDGKKLE----PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 169
G ++ + ++ P ++VLL S N + A+T L ++F A+G V ++
Sbjct: 331 PVTYFPQGAVTTSVASVRMSNPGVPGNSVLLVSNLNPE-AITPHGLFILFGAYGDVLRVK 389
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI----KVNN 225
+ KN AL+Q D A +A L G +Y G F + + S+H ++ + + +N
Sbjct: 390 IMFKNKE-NALVQMADATQAQIAISNLNGQKLY-GKFIR--ATLSKHQNIQLPREGEEDN 445
Query: 226 DRSRDYT 232
++DY+
Sbjct: 446 GLTKDYS 452
>gi|390332439|ref|XP_780392.3| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 7
[Strongylocentrotus purpuratus]
Length = 659
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ +L +EN+ Y +T+D LH +F +G V +I F K+G QAL+Q+ D A VAK
Sbjct: 282 NTILRVIVENVTYQITVDTLHEIFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLE 341
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 232
L+G IY+ C+L I +S+ T+LS+K NN++SRDYT
Sbjct: 342 LDGKNIYN-NCCQLRIDFSKLTNLSVKYNNEKSRDYT 377
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 7/81 (8%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+F +G V +I TF K+ FQALVQFSD A+ AK LDG++I C LRI
Sbjct: 304 IFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLELDGKNIYN-------NCCQLRI 356
Query: 86 TYSAHTDLSVKFQSHRSRDYT 106
+S T+LSVK+ + +SRDYT
Sbjct: 357 DFSKLTNLSVKYNNEKSRDYT 377
>gi|85003003|gb|ABC68595.1| polypyrimidine tract binding protein [Paracentrotus lividus]
Length = 618
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ +L +EN+ Y +T+D LH +F +G V +I F K+G QAL+Q+ D A VAK
Sbjct: 242 NTILRVIVENVTYQITVDTLHEIFRKYGTVLRIVTFIKSGQFQALVQFADASQAAVAKLE 301
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 232
L+G IY+ C+L I +S+ T+LS+K NN++SRDYT
Sbjct: 302 LDGKNIYN-NCCQLRIDFSKLTNLSVKYNNEKSRDYT 337
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 7/81 (8%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+F +G V +I TF K+ FQALVQF+D A+ AK LDG++I C LRI
Sbjct: 264 IFRKYGTVLRIVTFIKSGQFQALVQFADASQAAVAKLELDGKNIYN-------NCCQLRI 316
Query: 86 TYSAHTDLSVKFQSHRSRDYT 106
+S T+LSVK+ + +SRDYT
Sbjct: 317 DFSKLTNLSVKYNNEKSRDYT 337
>gi|390332442|ref|XP_003723501.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 4
[Strongylocentrotus purpuratus]
Length = 662
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ +L +EN+ Y +T+D LH +F +G V +I F K+G QAL+Q+ D A VAK
Sbjct: 319 NTILRVIVENVTYQITVDTLHEIFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLE 378
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 232
L+G IY+ C+L I +S+ T+LS+K NN++SRDYT
Sbjct: 379 LDGKNIYN-NCCQLRIDFSKLTNLSVKYNNEKSRDYT 414
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 104/217 (47%), Gaps = 40/217 (18%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+F +G V +I TF K+ FQALVQFSD A+ AK LDG++I C LRI
Sbjct: 341 IFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLELDGKNIYN-------NCCQLRI 393
Query: 86 TYSAHTDLSVKFQSHRSRDYTN---------------------PYLPVAPSAI---DASG 121
+S T+LSVK+ + +SRDYT P P SA+ A+
Sbjct: 394 DFSKLTNLSVKYNNEKSRDYTCDLPQGDGLTGVDPSTAAMLGVPGFPAGLSALPHHAAAA 453
Query: 122 QLSVGLDGKKLEPESNVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIA-MFDKNGGLQA 179
+ + G + S+V+L S N+ VT L +F +G VQ++ +++K A
Sbjct: 454 AQGMRMPGMYMPSGSSVILVS--NLTPELVTPQALFTLFGVYGDVQRVKILYEKRDN--A 509
Query: 180 LIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 216
LIQ D + +A + L G +Y ++ ++ S+H
Sbjct: 510 LIQMSDPNQSQLAMKHLSGVKLYGK---QIRVTASKH 543
>gi|390332437|ref|XP_003723500.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 3
[Strongylocentrotus purpuratus]
Length = 649
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ +L +EN+ Y +T+D LH +F +G V +I F K+G QAL+Q+ D A VAK
Sbjct: 272 NTILRVIVENVTYQITVDTLHEIFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLE 331
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 232
L+G IY+ C+L I +S+ T+LS+K NN++SRDYT
Sbjct: 332 LDGKNIYN-NCCQLRIDFSKLTNLSVKYNNEKSRDYT 367
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 7/81 (8%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+F +G V +I TF K+ FQALVQFSD A+ AK LDG++I C LRI
Sbjct: 294 IFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLELDGKNIYNNC-------CQLRI 346
Query: 86 TYSAHTDLSVKFQSHRSRDYT 106
+S T+LSVK+ + +SRDYT
Sbjct: 347 DFSKLTNLSVKYNNEKSRDYT 367
>gi|328869052|gb|EGG17430.1| hypothetical protein DFA_08425 [Dictyostelium fasciculatum]
Length = 603
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 68/105 (64%), Gaps = 2/105 (1%)
Query: 133 EPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVA 192
P N+LL +IEN V +D+L+ FS +G V +I +F+K+ LQAL++Y + A A
Sbjct: 122 RPIGNILLCTIENATMTVNVDLLNHFFSLYGEVLRIVIFNKSVNLQALVEYSSPELAFHA 181
Query: 193 KEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT--LPS 235
K+ L+G +Y GG+C L I S+ L++ +NNDR+RDYT LPS
Sbjct: 182 KKLLQGAMLYQGGYCVLRIEISKVDRLNVTLNNDRTRDYTKNLPS 226
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
H FS +G V +I F K+ QALV++S E A AK L G + + G C LR
Sbjct: 146 HFFSLYGEVLRIVIFNKSVNLQALVEYSSPELAFHAKKLLQGAMLYQ------GGYCVLR 199
Query: 85 ITYSAHTDLSVKFQSHRSRDYT 106
I S L+V + R+RDYT
Sbjct: 200 IEISKVDRLNVTLNNDRTRDYT 221
>gi|198434994|ref|XP_002131704.1| PREDICTED: similar to polypyrimidine tract binding protein-like
isoform 2 [Ciona intestinalis]
Length = 495
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL +ENM Y +TLDVLH +F+ FG V K F KN QAL+Q D + AK +L+
Sbjct: 149 VLRVVVENMLYPITLDVLHTIFTKFGVVLKTITFTKNNQFQALLQMGDAIQSQTAKLSLD 208
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQP 250
G IY+G C L I YS+ L++K NND+SRDYT P + + SIL P
Sbjct: 209 GQNIYNGC-CTLRIEYSKLPALNVKYNNDKSRDYTRNDLP--SGESSILNNPP 258
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+F+ FG V K TF K FQAL+Q D + +AK +LDG++I G CTLRI
Sbjct: 169 IFTKFGVVLKTITFTKNNQFQALLQMGDAIQSQTAKLSLDGQNIYN-------GCCTLRI 221
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAI 117
YS L+VK+ + +SRDYT LP S+I
Sbjct: 222 EYSKLPALNVKYNNDKSRDYTRNDLPSGESSI 253
>gi|390332446|ref|XP_003723503.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 6
[Strongylocentrotus purpuratus]
Length = 603
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ +L +EN+ Y +T+D LH +F +G V +I F K+G QAL+Q+ D A VAK
Sbjct: 260 NTILRVIVENVTYQITVDTLHEIFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLE 319
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 232
L+G IY+ C+L I +S+ T+LS+K NN++SRDYT
Sbjct: 320 LDGKNIYN-NCCQLRIDFSKLTNLSVKYNNEKSRDYT 355
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 104/217 (47%), Gaps = 40/217 (18%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+F +G V +I TF K+ FQALVQFSD A+ AK LDG++I C LRI
Sbjct: 282 IFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLELDGKNIYN-------NCCQLRI 334
Query: 86 TYSAHTDLSVKFQSHRSRDYTN---------------------PYLPVAPSAI---DASG 121
+S T+LSVK+ + +SRDYT P P SA+ A+
Sbjct: 335 DFSKLTNLSVKYNNEKSRDYTCDLPQGDGLTGVDPSTAAMLGVPGFPAGLSALPHHAAAA 394
Query: 122 QLSVGLDGKKLEPESNVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIA-MFDKNGGLQA 179
+ + G + S+V+L S N+ VT L +F +G VQ++ +++K A
Sbjct: 395 AQGMRMPGMYMPSGSSVILVS--NLTPELVTPQALFTLFGVYGDVQRVKILYEKRDN--A 450
Query: 180 LIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 216
LIQ D + +A + L G +Y ++ ++ S+H
Sbjct: 451 LIQMSDPNQSQLAMKHLSGVKLYGK---QIRVTASKH 484
>gi|390332435|ref|XP_003723499.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 2
[Strongylocentrotus purpuratus]
Length = 631
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ +L +EN+ Y +T+D LH +F +G V +I F K+G QAL+Q+ D A VAK
Sbjct: 254 NTILRVIVENVTYQITVDTLHEIFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLE 313
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 232
L+G IY+ C+L I +S+ T+LS+K NN++SRDYT
Sbjct: 314 LDGKNIYN-NCCQLRIDFSKLTNLSVKYNNEKSRDYT 349
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 7/81 (8%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+F +G V +I TF K+ FQALVQFSD A+ AK LDG++I C LRI
Sbjct: 276 IFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLELDGKNIYN-------NCCQLRI 328
Query: 86 TYSAHTDLSVKFQSHRSRDYT 106
+S T+LSVK+ + +SRDYT
Sbjct: 329 DFSKLTNLSVKYNNEKSRDYT 349
>gi|198434992|ref|XP_002131695.1| PREDICTED: similar to polypyrimidine tract binding protein-like
isoform 1 [Ciona intestinalis]
Length = 528
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL +ENM Y +TLDVLH +F+ FG V K F KN QAL+Q D + AK +L+
Sbjct: 149 VLRVVVENMLYPITLDVLHTIFTKFGVVLKTITFTKNNQFQALLQMGDAIQSQTAKLSLD 208
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQP 250
G IY+G C L I YS+ L++K NND+SRDYT P + + SIL P
Sbjct: 209 GQNIYNGC-CTLRIEYSKLPALNVKYNNDKSRDYTRNDLP--SGESSILNNPP 258
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+F+ FG V K TF K FQAL+Q D + +AK +LDG++I G CTLRI
Sbjct: 169 IFTKFGVVLKTITFTKNNQFQALLQMGDAIQSQTAKLSLDGQNIYN-------GCCTLRI 221
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAI 117
YS L+VK+ + +SRDYT LP S+I
Sbjct: 222 EYSKLPALNVKYNNDKSRDYTRNDLPSGESSI 253
>gi|294460075|gb|ADE75620.1| unknown [Picea sitchensis]
Length = 471
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ +LL +I ++ + +T++VLH VFS G V+KI F K+ GLQALIQY Q AV AK
Sbjct: 103 NRILLVTIHHLLFPITVEVLHQVFSPCGFVEKIVTFQKSAGLQALIQYTSQQNAVQAKNN 162
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
L+G IYDG C+L I +S L + N+RSRD+T PS P
Sbjct: 163 LQGRNIYDGC-CQLDIQFSNLNGLQVHYINERSRDFTNPSLP 203
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 52/86 (60%), Gaps = 7/86 (8%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFS GFV KI TF+K+AG QAL+Q++ + A AKN L GR+I G C L I
Sbjct: 125 VFSPCGFVEKIVTFQKSAGLQALIQYTSQQNAVQAKNNLQGRNIYD-------GCCQLDI 177
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLP 111
+S L V + + RSRD+TNP LP
Sbjct: 178 QFSNLNGLQVHYINERSRDFTNPSLP 203
>gi|294461205|gb|ADE76165.1| unknown [Picea sitchensis]
Length = 461
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 106/215 (49%), Gaps = 48/215 (22%)
Query: 30 FGFVHKITTFEKTAGFQALVQFSDTETA-------SSAKNALDGRSIPRYLLPENMGPCT 82
FG V K+ A QAL+Q +D +A S+ + ++ GR++
Sbjct: 29 FGTVTKLVMLR--AKNQALMQMNDIPSAITVLDHYSTVQPSIRGRNV------------- 73
Query: 83 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 142
I +S+H +L+ QS ++R +G + + +LL +
Sbjct: 74 -YIQFSSHQELTTTEQSGQARR-----------------------NGDQDSQPNRILLVT 109
Query: 143 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 202
I ++ Y +T++VLH VFS G V+KI +F K GLQA +QY Q A+ A L+G IY
Sbjct: 110 IHHLLYPITVEVLHQVFSPHGFVEKIVIFQK-SGLQAFVQYSSRQNAIQASNTLQGRNIY 168
Query: 203 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
DG C+L I +S +L + NN+R+RD+T PS P
Sbjct: 169 DGC-CQLDIQFSNLPELQVNYNNERTRDFTNPSLP 202
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 105/236 (44%), Gaps = 60/236 (25%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VFS GFV KI F+K+ G QA VQ+S + A A N L GR+I G C L I
Sbjct: 125 VFSPHGFVEKIVIFQKS-GLQAFVQYSSRQNAIQASNTLQGRNIYD-------GCCQLDI 176
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPV-------APSAIDASGQLSV------------- 125
+S +L V + + R+RD+TNP LP A S +A G +
Sbjct: 177 QFSNLPELQVNYNNERTRDFTNPSLPSEQKHRLPAQSFGEAGGMYGIQPVSLHHMVSAQA 236
Query: 126 -GLDGKKLEPESN------------------------VLLASIENMQYAVTLDVLHMVFS 160
GL+ ++ P SN VL+A++ + + D L +FS
Sbjct: 237 MGLNSLQM-PVSNASAIMEAFGGVLPRGVMGNNDRCTVLVANLNPEK--IDEDKLFNLFS 293
Query: 161 AFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 216
+G + +I + +N ALIQ D A +A L+G ++ +L +++S+H
Sbjct: 294 IYGNILRIKLL-RNKPDHALIQMADGLQAELAVNFLKGALLFGK---RLEVNFSKH 345
>gi|297275604|ref|XP_002801040.1| PREDICTED: polypyrimidine tract-binding protein 1 [Macaca mulatta]
Length = 549
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 74/140 (52%), Gaps = 5/140 (3%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK + +G IY+ C L NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSQDGQNIYN-ACCTLRXXXXXXXXXXXXYNNDKSRDYTRPDLPSGDSQPSL--- 288
Query: 249 QPVPMVGATANQYNGAQFAP 268
M A A+ Y GA F P
Sbjct: 289 -DQTMAAAFASPYAGAGFPP 307
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 101/251 (40%), Gaps = 71/251 (28%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK + DG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSQDGQNIYN-------ACCTLR 253
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS-------------------------AIDA 119
+ + +SRDYT P LP S AI
Sbjct: 254 XXXXXXXXXXXXYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFASPYAGAGFPPTFAIPQ 313
Query: 120 SGQLSV----------------------------GLDGKKLEPESNVLLASIENMQYAVT 151
+ LSV GL G ++VLL S N + VT
Sbjct: 314 AAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAGAG----NSVLLVSNLNPER-VT 368
Query: 152 LDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 210
L ++F +G VQ++ +F+K AL+Q D A +A L GH ++ +
Sbjct: 369 PQSLFILFGVYGDVQRVKILFNKKE--NALVQMADGNQAQLAMSHLNGHKLHGK---PIR 423
Query: 211 ISYSRHTDLSI 221
I+ S+H ++ +
Sbjct: 424 ITLSKHQNVQL 434
>gi|348686489|gb|EGZ26304.1| hypothetical protein PHYSODRAFT_350288 [Phytophthora sojae]
Length = 649
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 67/105 (63%), Gaps = 3/105 (2%)
Query: 134 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 193
P + +L+ S+ ++Y VT+DVL VF FG V+KI F K+ +AL+Q V A A+
Sbjct: 164 PPNQILMVSVSKIEYDVTVDVLQQVFQKFGNVEKIVTFWKDNEFKALVQMESVDQAQAAQ 223
Query: 194 EALEGHCIYDGGFC-KLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
AL+G IY G C +L I +SRH +L ++ N+DRSRDYT P+ P
Sbjct: 224 SALDGRDIYTG--CNQLSIVFSRHPELRVRYNDDRSRDYTNPNLP 266
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
VF FG V KI TF K F+ALVQ + A +A++ALDGR I G L
Sbjct: 187 QVFQKFGNVEKIVTFWKDNEFKALVQMESVDQAQAAQSALDGRDI-------YTGCNQLS 239
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAP 114
I +S H +L V++ RSRDYTNP LP P
Sbjct: 240 IVFSRHPELRVRYNDDRSRDYTNPNLPPGP 269
>gi|432101132|gb|ELK29416.1| Polypyrimidine tract-binding protein 1 [Myotis davidii]
Length = 566
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD--- 185
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY +
Sbjct: 182 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYAEPVS 241
Query: 186 VQTAVV------------------------AKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
Q A + AK +L+G IY+ C L I +S+ T L++
Sbjct: 242 AQHAKLIITFTKNKQFQALLQYAEPVSAQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNV 300
Query: 222 KVNNDRSRDYTLPSTPMVNSQPSI 245
K NND+SRDYT P P +SQPS+
Sbjct: 301 KYNNDKSRDYTRPDLPSGDSQPSL 324
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 44/217 (20%)
Query: 36 ITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSV 95
I TF K FQAL+Q+++ +A AK +LDG++I CTLRI +S T L+V
Sbjct: 248 IITFTKNKQFQALLQYAEPVSAQHAKLSLDGQNIYN-------ACCTLRIDFSKLTSLNV 300
Query: 96 KFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE-------------------- 133
K+ + +SRDYT P LP S ++D + + GL +
Sbjct: 301 KYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIPSAAAAAAAAGR 360
Query: 134 --------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYP 184
++VLL S N + VT L ++F +G VQ++ +F+K AL+Q
Sbjct: 361 IAIPGLGGAGNSVLLVSNLNPE-VVTPQSLFILFGVYGDVQRVKILFNKKE--NALVQMA 417
Query: 185 DVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
D A +A L GH ++ + I+ S+H ++ +
Sbjct: 418 DGSQAQLAMSHLNGHKLHGK---PVRITLSKHQNVQL 451
>gi|297275608|ref|XP_001092088.2| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Macaca
mulatta]
Length = 556
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK + +G IY+ C L NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSQDGQNIYN-ACCTLRXXXXXXXXXXXXYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 249 QPVPMVGA----TANQYNGAQFAP 268
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIISASPYAGAGFPP 314
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK + DG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSQDGQNIYN-------ACCTLR 253
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 115
+ + +SRDYT P LP S
Sbjct: 254 XXXXXXXXXXXXYNNDKSRDYTRPDLPSGDS 284
>gi|405953685|gb|EKC21299.1| Regulator of differentiation 1 [Crassostrea gigas]
Length = 764
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
Query: 143 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 202
+E++ Y V ++VL+ +FS FG V K+ +F KN QALIQ D A AK +L+G IY
Sbjct: 399 VEHLVYPVGIEVLYQIFSKFGKVLKMIIFTKNNSFQALIQMSDPVAANAAKLSLDGQNIY 458
Query: 203 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
+ G C L I YS+ +L++K NND+SRD+T P+ P
Sbjct: 459 N-GCCTLRIDYSKLNNLNVKYNNDKSRDFTNPNLP 492
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 7/94 (7%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V K+ F K FQAL+Q SD A++AK +LDG++I G CTLR
Sbjct: 413 QIFSKFGKVLKMIIFTKNNSFQALIQMSDPVAANAAKLSLDGQNIYN-------GCCTLR 465
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 118
I YS +L+VK+ + +SRD+TNP LP +D
Sbjct: 466 IDYSKLNNLNVKYNNDKSRDFTNPNLPSGDPGLD 499
>gi|255566638|ref|XP_002524303.1| polypyrimidine tract binding protein, putative [Ricinus communis]
gi|223536394|gb|EEF38043.1| polypyrimidine tract binding protein, putative [Ricinus communis]
Length = 437
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 150 VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKL 209
+ ++VLH VFS G V+KI F K+ G QALIQY Q+AV A+ AL+G IYDG C+L
Sbjct: 113 IIVEVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQLRQSAVAARTALQGRNIYDGC-CQL 171
Query: 210 HISYSRHTDLSIKVNNDRSRDYTLPSTP 237
I +S +L + NNDRSRD+T P P
Sbjct: 172 DIQFSNLDELQVNYNNDRSRDFTNPHLP 199
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 39/220 (17%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
VFS GFV KI TF+K+AGFQAL+Q+ ++A +A+ AL GR+I G C L
Sbjct: 120 QVFSPHGFVEKIVTFQKSAGFQALIQYQLRQSAVAARTALQGRNIYD-------GCCQLD 172
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDAS------------------------ 120
I +S +L V + + RSRD+TNP+LP +
Sbjct: 173 IQFSNLDELQVNYNNDRSRDFTNPHLPAEQKGRSSQAGYGDAGVAYPQMANAAAIAAAFG 232
Query: 121 GQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQAL 180
G L G+ G VL++++ + + D L +FS +G + +I + +N AL
Sbjct: 233 GGLPPGISGTN--DRCTVLVSNLNPDK--IDEDKLFNLFSLYGNIVRIKLL-RNKPDHAL 287
Query: 181 IQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 220
+Q D A +A L+G ++ +L +++S+H +++
Sbjct: 288 VQMGDGFQAELAVHFLKGAVLFGK---RLEVNFSKHPNIT 324
>gi|297275606|ref|XP_001092214.2| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2 [Macaca
mulatta]
Length = 530
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
A AK + +G IY+ C L NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSQDGQNIYN-ACCTLRXXXXXXXXXXXXYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 100/228 (43%), Gaps = 44/228 (19%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K FQAL+Q++D +A AK + DG++I CTLR
Sbjct: 201 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSQDGQNIYN-------ACCTLR 253
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE--------- 133
+ + +SRDYT P LP S ++D + + GL +
Sbjct: 254 XXXXXXXXXXXXYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIP 313
Query: 134 -------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDK 173
++VLL S N + VT L ++F +G VQ++ +F+K
Sbjct: 314 SAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQRVKILFNK 372
Query: 174 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
AL+Q D A +A L GH ++ + I+ S+H ++ +
Sbjct: 373 KE--NALVQMADGNQAQLAMSHLNGHKLHGK---PIRITLSKHQNVQL 415
>gi|321459460|gb|EFX70513.1| hypothetical protein DAPPUDRAFT_328086 [Daphnia pulex]
Length = 439
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 77/121 (63%), Gaps = 7/121 (5%)
Query: 134 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 193
PE+++LL +I N Y +T+DVLH + AFG V +I +F K+ G+QA++++ +V A AK
Sbjct: 14 PENHILLFTIVNPVYPITVDVLHTITQAFGEVLRIVIFKKH-GVQAMVEFANVDMARAAK 72
Query: 194 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPM 253
E L+G IY G C L I Y++ T L++ N+ + DYT P TP +SQ Q+P P+
Sbjct: 73 EGLDGADIYS-GCCTLKIEYAKPTRLNVHKNDSETWDYTTP-TPGADSQR----QRPAPL 126
Query: 254 V 254
+
Sbjct: 127 L 127
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+ AFG V +I F+K G QA+V+F++ + A +AK LDG I G CTL+I
Sbjct: 38 ITQAFGEVLRIVIFKK-HGVQAMVEFANVDMARAAKEGLDGADI-------YSGCCTLKI 89
Query: 86 TYSAHTDLSVKFQSHRSRDYTNP 108
Y+ T L+V + DYT P
Sbjct: 90 EYAKPTRLNVHKNDSETWDYTTP 112
>gi|294909465|ref|XP_002777772.1| polypyrimidine tract binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239885734|gb|EER09567.1| polypyrimidine tract binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 632
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 69/109 (63%), Gaps = 5/109 (4%)
Query: 131 KLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 186
+ +P+SN +LL +I N+ Y VT+DV+ V + FG ++K+ +F++ +QAL+Q DV
Sbjct: 139 RRDPDSNPPNRILLFTITNLVYPVTVDVISQVMNKFGGLEKVIVFNRGNAVQALVQLADV 198
Query: 187 QTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
TA VAKE L+G IY G + + YS L +K NN+RS D+T PS
Sbjct: 199 DTANVAKEQLDGQNIY-AGCNTIKVQYSSLPQLEVKHNNERSWDFTNPS 246
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 24 AHVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTL 83
+ V + FG + K+ F + QALVQ +D +TA+ AK LDG++I G T+
Sbjct: 168 SQVMNKFGGLEKVIVFNRGNAVQALVQLADVDTANVAKEQLDGQNI-------YAGCNTI 220
Query: 84 RITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLS 124
++ YS+ L VK + RS D+TNP L P ++A L+
Sbjct: 221 KVQYSSLPQLEVKHNNERSWDFTNPSL--LPGGMEAGSGLT 259
>gi|390466248|ref|XP_003733548.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 2 [Callithrix jacchus]
Length = 499
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
Query: 135 ESNVLLASIENMQYAVTLDVL-HMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 193
+S VL I+NM Y VT +FS FG V KI F KN QAL+QY D A AK
Sbjct: 185 QSPVLRIIIDNMYYPVTXXXXTKXIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAK 244
Query: 194 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 245 LALDGQNIYNA-CCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 295
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 52/86 (60%), Gaps = 7/86 (8%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+FS FG V KI TF K FQAL+Q+ D A AK ALDG++I CTLRI
Sbjct: 209 IFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYN-------ACCTLRI 261
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLP 111
+S +L+VK+ + +SRDYT P LP
Sbjct: 262 DFSKLVNLNVKYNNDKSRDYTRPDLP 287
>gi|294955170|ref|XP_002788430.1| polypyrimidine tract binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239903853|gb|EER20226.1| polypyrimidine tract binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 366
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 69/109 (63%), Gaps = 5/109 (4%)
Query: 131 KLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 186
+ +P+SN +LL +I N+ Y VT+DV+ V + FG ++K+ +F++ +QAL+Q DV
Sbjct: 94 RRDPDSNPPNRILLFTITNLVYPVTVDVISQVMNKFGGLEKVIVFNRGNAVQALVQLADV 153
Query: 187 QTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
TA VAKE L+G IY G + + YS L +K NN+RS D+T PS
Sbjct: 154 DTANVAKEQLDGQNIY-AGCNTIKVQYSSLPQLEVKHNNERSWDFTNPS 201
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 24 AHVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTL 83
+ V + FG + K+ F + QALVQ +D +TA+ AK LDG++I G T+
Sbjct: 123 SQVMNKFGGLEKVIVFNRGNAVQALVQLADVDTANVAKEQLDGQNIY-------AGCNTI 175
Query: 84 RITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLS 124
++ YS+ L VK + RS D+TNP L P +D L+
Sbjct: 176 KVQYSSLPQLEVKHNNERSWDFTNPSL--LPGGMDGGSGLT 214
>gi|348524683|ref|XP_003449852.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Oreochromis niloticus]
Length = 518
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 92/177 (51%), Gaps = 16/177 (9%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ I+ S + G + S NVLL +I N Y +T DVL+ + + GPVQ
Sbjct: 102 YIAGHPAFINYSTSQKISRPGDSDDTRSVNNVLLLTIINPIYPITTDVLYTICNNCGPVQ 161
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ L++ N+
Sbjct: 162 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPARLNVFKNDQ 219
Query: 227 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMVGATA--NQYNGAQFAPPPP 271
+ DYT P+ P N QP++LG P G + YN + PPPP
Sbjct: 220 DTWDYTNPNLSGQGDPNANPNKRQRQPALLGDHPPDYGGPQGGYHGYNDDSYGPPPP 276
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+ + G V +I F K G QA+V+F ++A AK +L+G I G CTL+I
Sbjct: 153 ICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-------GCCTLKI 204
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ L+V + DYTNP L
Sbjct: 205 EYAKPARLNVFKNDQDTWDYTNPNL 229
>gi|432895625|ref|XP_004076081.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Oryzias
latipes]
Length = 529
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 95/190 (50%), Gaps = 27/190 (14%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ I+ S + G + S NVLL +I N Y +T DVL+ + + GPVQ
Sbjct: 102 YIAGHPAFINYSTSQKISRPGDSDDTRSVNNVLLLTILNPIYPITTDVLYTICNNCGPVQ 161
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 162 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 219
Query: 227 RSRDYTLPS----------------TPMVN-----SQPSILGQQPVPMVG--ATANQYNG 263
+ DYT P+ P N QP++LG P G + + YN
Sbjct: 220 DTWDYTNPNLSSQDADGEGNWNNSQDPNANPNKRQRQPALLGDHPPDYGGPQGSYHAYND 279
Query: 264 AQFAPPPPEQ 273
+ PPPP +
Sbjct: 280 DAYGPPPPHR 289
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 12/92 (13%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 158 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-------GCCTLKIEYAKP 209
Query: 91 TDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQ 122
T L+V + DYTNP L S+ DA G+
Sbjct: 210 TRLNVFKNDQDTWDYTNPNL----SSQDADGE 237
>gi|428170649|gb|EKX39572.1| hypothetical protein GUITHDRAFT_114298 [Guillardia theta CCMP2712]
Length = 580
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 32/227 (14%)
Query: 21 GERAHVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGP 80
G+ + S FG V ++ F + QA V+F E SA+ + S+P +G
Sbjct: 24 GDLKTLASRFGEVRRV--FHLSRKHQAFVEFVSLE--DSARMLAECESVP-----IRVGT 74
Query: 81 CTLRITYSAHTDLSVKFQSHRSRDYTNP--YLPVAPSAIDASGQLSVGLDGKKLEPESNV 138
+ YS T+LS + + + + V P++ ++ +
Sbjct: 75 RVIVAQYSNKTELSPPTREYEGEGFVRERSWNAVPPNS------------------DARI 116
Query: 139 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 198
LL ++ N+ Y V +DV++ VFS G ++KI +F+K G QAL+Q+ A A + G
Sbjct: 117 LLVTVTNVVYKVDVDVMYQVFSMMGTIEKIVIFNKQGKTQALVQFERPADAQAALDRFNG 176
Query: 199 HCIYDGGFC-KLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPS 244
IY+G C L I +S D+++K NN+RS D+T P+ P N S
Sbjct: 177 LNIYNG--CNNLQIGFSNLLDITVKYNNERSYDFTNPNLPAGNPNES 221
>gi|149056441|gb|EDM07872.1| rCG53531, isoform CRA_b [Rattus norvegicus]
Length = 456
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 30 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 89
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 90 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 147
Query: 227 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 148 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 205
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 86 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 137
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 138 TRLNVFKNDQDTWDYTNPNL 157
>gi|11527777|dbj|BAB18649.1| heterogeneous nuclear ribonucleoprotein L [Homo sapiens]
Length = 589
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 163 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 222
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 223 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 280
Query: 227 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 281 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 338
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 219 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 270
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 271 TRLNVFKNDQDTWDYTNPNL 290
>gi|410337383|gb|JAA37638.1| heterogeneous nuclear ribonucleoprotein L [Pan troglodytes]
Length = 589
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 163 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 222
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 223 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 280
Query: 227 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 281 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 338
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 219 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 270
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 271 TRLNVFKNDQDTWDYTNPNL 290
>gi|441652820|ref|XP_004093177.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein L [Nomascus leucogenys]
Length = 590
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 164 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 223
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 224 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 281
Query: 227 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 282 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 339
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 220 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 271
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 272 TRLNVFKNDQDTWDYTNPNL 291
>gi|300796171|ref|NP_001178959.1| heterogeneous nuclear ribonucleoprotein L [Bos taurus]
gi|410983084|ref|XP_003997873.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Felis catus]
gi|296477716|tpg|DAA19831.1| TPA: heterogeneous nuclear ribonucleoprotein L [Bos taurus]
Length = 588
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 162 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 221
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 222 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 279
Query: 227 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 280 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 337
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 218 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 269
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 270 TRLNVFKNDQDTWDYTNPNL 289
>gi|52632383|ref|NP_001524.2| heterogeneous nuclear ribonucleoprotein L isoform a [Homo sapiens]
gi|388452706|ref|NP_001252929.1| heterogeneous nuclear ribonucleoprotein L [Macaca mulatta]
gi|114676995|ref|XP_512642.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L isoform 6 [Pan
troglodytes]
gi|359318672|ref|XP_003638880.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Canis
lupus familiaris]
gi|402905454|ref|XP_003915534.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Papio anubis]
gi|215274006|sp|P14866.2|HNRPL_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein L;
Short=hnRNP L
gi|119577232|gb|EAW56828.1| heterogeneous nuclear ribonucleoprotein L, isoform CRA_c [Homo
sapiens]
gi|306921585|dbj|BAJ17872.1| heterogeneous nuclear ribonucleoprotein L [synthetic construct]
gi|387542466|gb|AFJ71860.1| heterogeneous nuclear ribonucleoprotein L isoform a [Macaca
mulatta]
gi|410298568|gb|JAA27884.1| heterogeneous nuclear ribonucleoprotein L [Pan troglodytes]
Length = 589
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 163 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 222
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 223 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 280
Query: 227 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 281 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 338
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 219 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 270
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 271 TRLNVFKNDQDTWDYTNPNL 290
>gi|296233743|ref|XP_002807879.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein L [Callithrix jacchus]
Length = 589
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 163 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 222
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 223 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 280
Query: 227 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 281 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 338
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 219 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 270
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 271 TRLNVFKNDQDTWDYTNPNL 290
>gi|52632385|ref|NP_001005335.1| heterogeneous nuclear ribonucleoprotein L isoform b [Homo sapiens]
gi|332855272|ref|XP_001167265.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L isoform 4 [Pan
troglodytes]
gi|397482177|ref|XP_003812309.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Pan paniscus]
gi|403305233|ref|XP_003943172.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Saimiri
boliviensis boliviensis]
gi|158257662|dbj|BAF84804.1| unnamed protein product [Homo sapiens]
Length = 456
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 30 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 89
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 90 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-GCCTLKIEYAKPTRLNVFKNDQ 147
Query: 227 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 148 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 205
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 86 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 137
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 138 TRLNVFKNDQDTWDYTNPNL 157
>gi|426388622|ref|XP_004060732.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Gorilla
gorilla gorilla]
Length = 589
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 163 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 222
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 223 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 280
Query: 227 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 281 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 338
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 219 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 270
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 271 TRLNVFKNDQDTWDYTNPNL 290
>gi|348563003|ref|XP_003467298.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Cavia
porcellus]
Length = 586
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 160 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 219
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 220 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 277
Query: 227 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 278 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 335
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 216 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 267
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 268 TRLNVFKNDQDTWDYTNPNL 287
>gi|183980004|ref|NP_796275.3| heterogeneous nuclear ribonucleoprotein L [Mus musculus]
gi|197927209|ref|NP_116008.2| heterogeneous nuclear ribonucleoprotein L isoform b [Rattus
norvegicus]
gi|215273994|sp|Q8R081.2|HNRPL_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein L;
Short=hnRNP L
gi|71119320|gb|AAH99683.1| Hnrpl protein [Mus musculus]
Length = 586
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 160 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 219
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 220 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 277
Query: 227 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 278 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 335
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 216 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 267
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 268 TRLNVFKNDQDTWDYTNPNL 287
>gi|291390016|ref|XP_002711505.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Oryctolagus
cuniculus]
Length = 586
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 160 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 219
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 220 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 277
Query: 227 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 278 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 335
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 216 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 267
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 268 TRLNVFKNDQDTWDYTNPNL 287
>gi|148692162|gb|EDL24109.1| heterogeneous nuclear ribonucleoprotein L, isoform CRA_b [Mus
musculus]
Length = 567
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 141 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 200
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 201 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 258
Query: 227 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 259 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 316
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 197 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 248
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 249 TRLNVFKNDQDTWDYTNPNL 268
>gi|432889396|ref|XP_004075256.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Oryzias latipes]
Length = 519
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 109/223 (48%), Gaps = 32/223 (14%)
Query: 76 ENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 135
E+M + +TY+A + Y+ P+ I+ S + G +
Sbjct: 81 EDMNGSSTAVTYAADNQV---------------YIAGHPAFINYSTSKKISRPGDSDDSR 125
Query: 136 S--NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 193
S NVLL +I N Y +T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK
Sbjct: 126 SVNNVLLFTIMNPIYPITTDVLYTICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAK 184
Query: 194 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPST---PMVNS-------QP 243
+L G IY G C L I Y++ T L++ N+ + DYT P+ +N+ QP
Sbjct: 185 ASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNLGGPEDMNANPNKRPRQP 243
Query: 244 SILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGA 286
++LG P P G + Y+ + PP E M PT G G
Sbjct: 244 ALLGDHP-PEYGGGYHGYD-ENYGSPPYEGRRM-GPTMRGRGG 283
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 155 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-------GCCTLKIEYAKP 206
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 207 TRLNVFKNDQDTWDYTNPNL 226
>gi|211828181|gb|AAH69184.2| HNRNPL protein [Homo sapiens]
Length = 572
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 146 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 205
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 206 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 263
Query: 227 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 264 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 321
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 202 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 253
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 254 TRLNVFKNDQDTWDYTNPNL 273
>gi|380799767|gb|AFE71759.1| heterogeneous nuclear ribonucleoprotein L isoform a, partial
[Macaca mulatta]
Length = 467
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 41 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 100
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 101 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-GCCTLKIEYAKPTRLNVFKNDQ 158
Query: 227 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 159 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 216
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 97 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 148
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 149 TRLNVFKNDQDTWDYTNPNL 168
>gi|197245939|gb|AAI69048.1| Hnrnpl protein [Rattus norvegicus]
Length = 571
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 145 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 204
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 205 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 262
Query: 227 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 263 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 320
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 201 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 252
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 253 TRLNVFKNDQDTWDYTNPNL 272
>gi|119577230|gb|EAW56826.1| heterogeneous nuclear ribonucleoprotein L, isoform CRA_a [Homo
sapiens]
Length = 557
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 131 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 190
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 191 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 248
Query: 227 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 249 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 306
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 187 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 238
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 239 TRLNVFKNDQDTWDYTNPNL 258
>gi|343959210|dbj|BAK63460.1| heterogeneous nuclear ribonucleoprotein L [Pan troglodytes]
Length = 558
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 132 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 191
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 192 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 249
Query: 227 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 250 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 307
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 188 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 239
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 240 TRLNVFKNDQDTWDYTNPNL 259
>gi|395859744|ref|XP_003802192.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Otolemur
garnettii]
Length = 557
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 131 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 190
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 191 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 248
Query: 227 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 249 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 306
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 187 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 238
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 239 TRLNVFKNDQDTWDYTNPNL 258
>gi|189053899|dbj|BAG36406.1| unnamed protein product [Homo sapiens]
Length = 558
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 132 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 191
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 192 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 249
Query: 227 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 250 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 307
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 188 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 239
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 240 TRLNVFKNDQDTWDYTNPNL 259
>gi|20072624|gb|AAH27206.1| Heterogeneous nuclear ribonucleoprotein L [Mus musculus]
gi|148692161|gb|EDL24108.1| heterogeneous nuclear ribonucleoprotein L, isoform CRA_a [Mus
musculus]
gi|149056440|gb|EDM07871.1| rCG53531, isoform CRA_a [Rattus norvegicus]
Length = 555
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 129 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 188
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 189 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 246
Query: 227 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 247 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 304
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 185 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 236
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 237 TRLNVFKNDQDTWDYTNPNL 256
>gi|32356|emb|CAA34261.1| unnamed protein product [Homo sapiens]
gi|226731|prf||1604358A nuclear RNP protein L
Length = 558
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 132 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 191
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 192 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 249
Query: 227 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 250 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 307
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 188 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 239
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 240 TRLNVFKNDQDTWDYTNPNL 259
>gi|426243770|ref|XP_004015721.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Ovis aries]
Length = 598
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 172 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 231
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 232 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 289
Query: 227 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 290 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 347
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 228 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 279
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 280 TRLNVFKNDQDTWDYTNPNL 299
>gi|330801720|ref|XP_003288872.1| hypothetical protein DICPUDRAFT_55687 [Dictyostelium purpureum]
gi|325081065|gb|EGC34595.1| hypothetical protein DICPUDRAFT_55687 [Dictyostelium purpureum]
Length = 663
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Query: 138 VLLASIENM-QYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 196
VLL +IE+ +++T+D L+ FS+ G V +I MF KN LQALI++ V A+ AK+ L
Sbjct: 177 VLLCTIESQANHSITIDHLYHAFSSCGEVLRIVMFTKNN-LQALIEFSSVDNALNAKKTL 235
Query: 197 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 232
GH ++ GG CKL + S+ L+I N DR++DYT
Sbjct: 236 FGHALFHGGQCKLKLEISKTDRLNITQNTDRAKDYT 271
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
H FS+ G V +I F K QAL++FS + A +AK L G ++ + G C L+
Sbjct: 197 HAFSSCGEVLRIVMFTKN-NLQALIEFSSVDNALNAKKTLFGHAL------FHGGQCKLK 249
Query: 85 ITYSAHTDLSVKFQSHRSRDYT 106
+ S L++ + R++DYT
Sbjct: 250 LEISKTDRLNITQNTDRAKDYT 271
>gi|397507212|ref|XP_003824099.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1-like [Pan paniscus]
Length = 541
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 92/172 (53%), Gaps = 18/172 (10%)
Query: 83 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDA--SGQLS-----VGLD-GKKLEP 134
+ I +S H L +++RD P A A+++ SG L+ +D G +
Sbjct: 126 IYIQFSNHKGLKTDSSPNQARD------PAAXQAVNSVQSGNLAWTAPEAAVDAGMGMAG 179
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL +EN+ Y +TLDVLH +FS FG V+ I F K+ QAL+QY D + A K
Sbjct: 180 QSPVLRIIVENLFYPMTLDVLHQIFSKFGTVKTIT-FIKDNQFQALLQYTDPENAQHTKL 238
Query: 195 ALEGHCIYDGGFC-KLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
+L+ Y+ C L I +S+ L++K +ND+SRDY P P +S PS+
Sbjct: 239 SLDWQNTYNA--CHTLCIDFSKLISLNVKYSNDKSRDYXRPDLPSGDSXPSL 288
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC-TL 83
+FS FG V K TF K FQAL+Q++D E A K +LD ++ C TL
Sbjct: 202 QIFSKFGTV-KTITFIKDNQFQALLQYTDPENAQHTKLSLDWQN--------TYNACHTL 252
Query: 84 RITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLD 128
I +S L+VK+ + +SRDY P LP S ++V D
Sbjct: 253 CIDFSKLISLNVKYSNDKSRDYXRPDLPSGDSXPSLDQXMAVAFD 297
>gi|395522271|ref|XP_003765161.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Sarcophilus
harrisii]
Length = 510
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 84 YIAGHPAFVNYSTSQKISRPGDTDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 143
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 144 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 201
Query: 227 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 202 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 259
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 140 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 191
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 192 TRLNVFKNDQDTWDYTNPNL 211
>gi|194215401|ref|XP_001496787.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Equus
caballus]
Length = 509
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 83 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 142
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 143 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFRNDQ 200
Query: 227 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 201 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 258
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 139 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 190
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 191 TRLNVFRNDQDTWDYTNPNL 210
>gi|126329101|ref|XP_001362792.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Monodelphis
domestica]
Length = 607
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 181 YIAGHPAFVNYSTSQKISRPGDTDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 240
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 241 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 298
Query: 227 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 299 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 356
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 237 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 288
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 289 TRLNVFKNDQDTWDYTNPNL 308
>gi|66820074|ref|XP_643683.1| hypothetical protein DDB_G0275365 [Dictyostelium discoideum AX4]
gi|60471793|gb|EAL69748.1| hypothetical protein DDB_G0275365 [Dictyostelium discoideum AX4]
Length = 695
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 69/104 (66%), Gaps = 3/104 (2%)
Query: 138 VLLASIEN-MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 196
VLL++IEN ++T+D L+ VFS+ G V +I MF+KN LQALI++ V++A+ AK+ L
Sbjct: 156 VLLSTIENPGSNSITIDHLYHVFSSCGEVLRIVMFNKNN-LQALIEFSTVESALHAKKTL 214
Query: 197 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVN 240
H ++ GG C L + S+ L+I N DR++D++ S P VN
Sbjct: 215 SNHSLFHGGQCTLKLEVSKTDRLNITQNTDRAKDFS-KSLPTVN 257
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
HVFS+ G V +I F K QAL++FS E+A AK L S+ G CTL+
Sbjct: 176 HVFSSCGEVLRIVMFNKN-NLQALIEFSTVESALHAKKTLSNHSLFH------GGQCTLK 228
Query: 85 ITYSAHTDLSVKFQSHRSRDYT 106
+ S L++ + R++D++
Sbjct: 229 LEVSKTDRLNITQNTDRAKDFS 250
>gi|449267533|gb|EMC78469.1| Regulator of differentiation 1, partial [Columba livia]
Length = 499
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 73/131 (55%), Gaps = 7/131 (5%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL ++N+ + ++L++LH + S FGPV +I +F K G QAL +Y + ++A AK+ L
Sbjct: 136 VLRIIVDNVSHHISLEMLHEILSPFGPVLRIIIFTKYGKFQALAEYDNPRSAYCAKKTLN 195
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGAT 257
G I+ C + + YS+ T L+IK NN++SRD+T P + Q I QP+
Sbjct: 196 GQGIFTSD-CFIRVDYSKFTSLAIKYNNEKSRDFTRLDLPSGDGQ--IYMDQPIAAAYGI 252
Query: 258 ANQ----YNGA 264
N Y GA
Sbjct: 253 QNNIVPSYTGA 263
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 98/236 (41%), Gaps = 57/236 (24%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+ S FG V +I F K FQAL ++ + +A AK L+G+ I C +R+
Sbjct: 156 ILSPFGPVLRIIIFTKYGKFQALAEYDNPRSAYCAKKTLNGQGI-------FTSDCFIRV 208
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLP---------------------VAPSAIDASG--- 121
YS T L++K+ + +SRD+T LP + PS A+G
Sbjct: 209 DYSKFTSLAIKYNNEKSRDFTRLDLPSGDGQIYMDQPIAAAYGIQNNIVPSYTGAAGFTP 268
Query: 122 QLSVGLDGKKLEP---------------------ESNVLLASIENMQYAVTLDVLHMVFS 160
+S L P E++VLL S N AVT L ++F
Sbjct: 269 NMSFSQGAGSLVPPLPTAVRSLAPPGQRTYPDFSENSVLLVSNLNPN-AVTPYGLFILFG 327
Query: 161 AFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 216
+G V ++ + + +AL+Q D A +A L G +Y LH ++S+H
Sbjct: 328 IYGNVHRVKIMFRTKE-KALVQMADANQARLAISYLNGQKLYGR---VLHATFSKH 379
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 86/196 (43%), Gaps = 26/196 (13%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+F +G VH++ +T +ALVQ +D A A + L+G + + L
Sbjct: 325 LFGIYGNVHRVKIMFRTKE-KALVQMADANQARLAISYLNG---------QKLYGRVLHA 374
Query: 86 TYSAHTDLSV----KFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLA 141
T+S H + + + ++DY+N P+ I S + + P S L
Sbjct: 375 TFSKHHTVQLLRGGRDDQGLTKDYSNS--PLHRFKIPGSKNF------QNIFPPSATL-- 424
Query: 142 SIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCI 201
+ N+ VT+D + +F++ G K F +N ALIQ V+ AV A L H +
Sbjct: 425 HLSNIPSCVTVDDMKNLFASTGCTVKACRFFRNNCRTALIQLGSVEEAVHALIELHNHDL 484
Query: 202 YDGGFCKLHISYSRHT 217
G L +S+++HT
Sbjct: 485 --GQNRTLRVSFAKHT 498
>gi|67971924|dbj|BAE02304.1| unnamed protein product [Macaca fascicularis]
Length = 456
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 30 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 89
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 90 GIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-GCCTLKIEYAKPTRLNVFKNDQ 147
Query: 227 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
+ DYT P+ P N QP +LG +P G + Y+ + PPPP
Sbjct: 148 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDRPAEYGGPHGGYHSHYHDEGYGPPPP 205
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 86 GPVQGIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 137
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 138 TRLNVFKNDQDTWDYTNPNL 157
>gi|410978917|ref|XP_003995834.1| PREDICTED: polypyrimidine tract-binding protein 3 [Felis catus]
Length = 540
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 86/175 (49%), Gaps = 28/175 (16%)
Query: 158 VFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHT 217
+FS FG V KI F KN QAL+QY D A AK AL+G IY+ C L I +S+ T
Sbjct: 189 IFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYNAC-CTLRIDFSKLT 247
Query: 218 DLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV------GATANQYNGAQ-FAPPP 270
L++K NND+SRD+T P + QPS+ +P PM G ++ Y GA FAP
Sbjct: 248 SLNVKYNNDKSRDFTRLDLPTGDGQPSL---EP-PMAAAFGAPGIISSPYAGAAGFAPAI 303
Query: 271 PEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMGPGMMQMHMPGQSGM 325
HQ T AVP A + P ++ +M +PG SG+
Sbjct: 304 G----FHQATGISVPAVPGA------------LGPLTITSSAVTGRMAIPGTSGV 342
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 52/88 (59%), Gaps = 7/88 (7%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+FS FG V KI TF K FQAL+Q++D A AK ALDG++I CTLRI
Sbjct: 189 IFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYN-------ACCTLRI 241
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVA 113
+S T L+VK+ + +SRD+T LP
Sbjct: 242 DFSKLTSLNVKYNNDKSRDFTRLDLPTG 269
>gi|158254346|gb|AAI54329.1| Hnrnpl protein [Danio rerio]
Length = 522
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 74/117 (63%), Gaps = 4/117 (3%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+NVLL +I N Y +T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK +
Sbjct: 132 NNVLLLTIMNPIYPITSDVLYTICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKAS 190
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS--TPMVNSQPSILGQQP 250
L G IY G C L I Y++ T L++ N+ + DYT PS T +N+ P+ +QP
Sbjct: 191 LNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPSLGTQDMNANPNKRQRQP 246
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 159 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-------GCCTLKIEYAKP 210
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 211 TRLNVFKNDQDTWDYTNPSL 230
>gi|325187058|emb|CCA21600.1| polypyrimidine tractbinding protein putative [Albugo laibachii
Nc14]
Length = 614
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 100/210 (47%), Gaps = 28/210 (13%)
Query: 46 QALVQFSDTETASSAKNALDGR-SIPR----YLLPENMGPCTLRITYSAHTDLSVKFQSH 100
QA VQ D +A++ N R ++ R + N T R + D SV+ Q H
Sbjct: 69 QAFVQLPDVSSATNLINFYQTRDAMIRGARIFFEYSNRSEITTRAGF--QDDSSVE-QHH 125
Query: 101 RSR------------DYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQY 148
R DY N V + SG + G G P + +L+ ++ ++Y
Sbjct: 126 TQRSNRPTTRQEQPADYDN----VLRNQHSRSGNGASGRRGYAGAPNT-ILMVTVTKIEY 180
Query: 149 AVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCK 208
VT+DVL VF FG VQK+ F KN +AL+Q + A A++AL+G IY G C
Sbjct: 181 DVTVDVLQQVFQKFGNVQKVVTFWKNEEFKALVQMESIDQAQAAQQALDGRDIYTG--CN 238
Query: 209 -LHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
L I +SRH +L ++ NNDRS DY P P
Sbjct: 239 TLGIVFSRHPELRVRFNNDRSWDYMNPGLP 268
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 55/97 (56%), Gaps = 8/97 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
VF FG V K+ TF K F+ALVQ + A +A+ ALDGR I G TL
Sbjct: 189 QVFQKFGNVQKVVTFWKNEEFKALVQMESIDQAQAAQQALDGRDI-------YTGCNTLG 241
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASG 121
I +S H +L V+F + RS DY NP LP PSA D+SG
Sbjct: 242 IVFSRHPELRVRFNNDRSWDYMNPGLPPGPSA-DSSG 277
>gi|66816231|ref|XP_642125.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60470245|gb|EAL68225.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 530
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 137 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 196
N++L +I N Y +T + +H + S +G V +I +F K GLQ +++ +A AKE+L
Sbjct: 135 NIILCTILNPIYPITTNTIHNIMSPYGRVIRIVIFQKKSGLQTFVEFDSPYSAWAAKESL 194
Query: 197 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 232
G IY+GG CKL I ++R + L++K N+D++ DYT
Sbjct: 195 NGQDIYNGG-CKLQIEFARVSKLNVKQNDDKTADYT 229
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
++ S +G V +I F+K +G Q V+F +A +AK +L+G+ I G C L+
Sbjct: 155 NIMSPYGRVIRIVIFQKKSGLQTFVEFDSPYSAWAAKESLNGQDIYN-------GGCKLQ 207
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPY 109
I ++ + L+VK ++ DYT +
Sbjct: 208 IEFARVSKLNVKQNDDKTADYTAEF 232
>gi|351706875|gb|EHB09794.1| Polypyrimidine tract-binding protein 1 [Heterocephalus glaber]
Length = 543
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNSQFQALLQYADPVS 233
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSR 229
A A+ +L+ IY+ C L I +S+ T L++K N D+SR
Sbjct: 234 AQHARLSLDRQNIYN-TCCTLSIDFSKLTSLNVKYNYDKSR 273
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 37/219 (16%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+FS FG V KI TF K + FQAL+Q++D +A A+ +LD ++I CTL
Sbjct: 202 QIFSKFGTVLKIITFTKNSQFQALLQYADPVSAQHARLSLDRQNIYNTC-------CTLS 254
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDAS-----GQLS--------------- 124
I +S T L+VK+ +SR P + P A S G L+
Sbjct: 255 IDFSKLTSLNVKYNYDKSRAGFPPTFDI-PQAAGLSVPKVHGALAPLAIPSAAAAAAVAG 313
Query: 125 -VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQ 182
+G+ G S VLL S N + VT L ++F G VQ++ +F+K AL+Q
Sbjct: 314 RIGIPGLGAAGNS-VLLVSNLNPER-VTPQSLFILFGVHGDVQRVKILFNKKE--NALVQ 369
Query: 183 YPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
D A +A L+GH ++ + I+ S+H ++ +
Sbjct: 370 MADGSRAQLAMSHLDGHKLHGK---PIRITLSKHQNVQL 405
>gi|348524681|ref|XP_003449851.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Oreochromis niloticus]
Length = 529
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 92/188 (48%), Gaps = 27/188 (14%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ I+ S + G + S NVLL +I N Y +T DVL+ + + GPVQ
Sbjct: 102 YIAGHPAFINYSTSQKISRPGDSDDTRSVNNVLLLTIINPIYPITTDVLYTICNNCGPVQ 161
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ L++ N+
Sbjct: 162 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPARLNVFKNDQ 219
Query: 227 RSRDYTLPS----------------TPMVN-----SQPSILGQQPVPMVGATA--NQYNG 263
+ DYT P+ P N QP++LG P G + YN
Sbjct: 220 DTWDYTNPNLSGQDADGEGNWNNSQDPNANPNKRQRQPALLGDHPPDYGGPQGGYHGYND 279
Query: 264 AQFAPPPP 271
+ PPPP
Sbjct: 280 DSYGPPPP 287
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 12/97 (12%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+ + G V +I F K G QA+V+F ++A AK +L+G I G CTL+I
Sbjct: 153 ICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-------GCCTLKI 204
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQ 122
Y+ L+V + DYTNP L S DA G+
Sbjct: 205 EYAKPARLNVFKNDQDTWDYTNPNL----SGQDADGE 237
>gi|313228979|emb|CBY18131.1| unnamed protein product [Oikopleura dioica]
Length = 409
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 79/152 (51%), Gaps = 16/152 (10%)
Query: 133 EPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVA 192
+ E N++L +I N Y +T VLH + FG +++I +F K LQA+I++ D++ A+ A
Sbjct: 33 QKEHNIVLLTIRNPFYPITTSVLHKAAARFGDIKRIVIFKKK-FLQAMIEFSDIKMAIQA 91
Query: 193 KEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPS-ILGQQPV 251
K L G IY G C + Y+R L++ N+D + DY++ S V +P +LG +P+
Sbjct: 92 KAGLHGQDIY-SGCCSIKCEYARTEKLNVYKNDDTTWDYSVSSQGQVQKKPCGLLGDRPI 150
Query: 252 PMVGATANQ-------------YNGAQFAPPP 270
GA N YN A PPP
Sbjct: 151 IPNGAPFNAERESVPPQVPFPVYNDAHGYPPP 182
>gi|217416379|ref|NP_001136122.1| heterogeneous nuclear ribonucleoprotein L-like isoform 2 [Homo
sapiens]
gi|25988649|gb|AAN76189.1| BLOCK24 variant [Homo sapiens]
gi|67005958|gb|AAQ20084.2| stromal RNA regulating factor [Homo sapiens]
gi|383409737|gb|AFH28082.1| heterogeneous nuclear ribonucleoprotein L-like isoform 2 [Macaca
mulatta]
gi|384950354|gb|AFI38782.1| heterogeneous nuclear ribonucleoprotein L-like isoform 2 [Macaca
mulatta]
gi|410214348|gb|JAA04393.1| heterogeneous nuclear ribonucleoprotein L-like [Pan troglodytes]
gi|410289228|gb|JAA23214.1| heterogeneous nuclear ribonucleoprotein L-like [Pan troglodytes]
Length = 537
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 161 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 219
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 220 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 275
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 276 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 328
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 329 GSVVMVSGLHQLKM 342
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 183 VCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKI 234
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 235 EYARPTRLNVIRNDNDSWDYTKPYL 259
>gi|395846042|ref|XP_003795724.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Otolemur
garnettii]
Length = 536
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 160 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 218
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 219 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 274
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 275 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 327
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 328 GSVVMVSGLHQLKM 341
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 182 VCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKI 233
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 234 EYARPTRLNVIRNDNDSWDYTKPYL 258
>gi|334313145|ref|XP_001365024.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Monodelphis
domestica]
Length = 538
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 162 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 220
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 221 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 276
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 277 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 329
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 330 GSVVMVSGLHQLKM 343
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 184 VCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKI 235
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 236 EYARPTRLNVIRNDNDSWDYTKPYL 260
>gi|158257950|dbj|BAF84948.1| unnamed protein product [Homo sapiens]
Length = 537
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 161 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 219
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 220 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 275
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 276 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 328
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 329 GSVVMVSGLHQLKM 342
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 183 VCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKI 234
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 235 EYARPTRLNVIRNDNDSWDYTKPYL 259
>gi|116004021|ref|NP_001070368.1| heterogeneous nuclear ribonucleoprotein L-like [Bos taurus]
gi|115305250|gb|AAI23452.1| Heterogeneous nuclear ribonucleoprotein L-like [Bos taurus]
gi|296482596|tpg|DAA24711.1| TPA: heterogeneous nuclear ribonucleoprotein L-like [Bos taurus]
Length = 541
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 165 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 223
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 224 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 279
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 280 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 332
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 333 GSVVMVSGLHQLKM 346
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 187 VCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKI 238
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 239 EYARPTRLNVIRNDNDSWDYTKPYL 263
>gi|20149709|ref|NP_612403.2| heterogeneous nuclear ribonucleoprotein L-like isoform 1 [Homo
sapiens]
gi|62286941|sp|Q8WVV9.1|HNRLL_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein L-like;
Short=hnRNPLL; AltName: Full=Stromal RNA-regulating
factor
gi|17028350|gb|AAH17480.1| Heterogeneous nuclear ribonucleoprotein L-like [Homo sapiens]
gi|62988915|gb|AAY24302.1| unknown [Homo sapiens]
gi|158256360|dbj|BAF84151.1| unnamed protein product [Homo sapiens]
gi|380784945|gb|AFE64348.1| heterogeneous nuclear ribonucleoprotein L-like isoform 1 [Macaca
mulatta]
gi|383409735|gb|AFH28081.1| heterogeneous nuclear ribonucleoprotein L-like isoform 1 [Macaca
mulatta]
gi|410214350|gb|JAA04394.1| heterogeneous nuclear ribonucleoprotein L-like [Pan troglodytes]
gi|410253266|gb|JAA14600.1| heterogeneous nuclear ribonucleoprotein L-like [Pan troglodytes]
gi|410289230|gb|JAA23215.1| heterogeneous nuclear ribonucleoprotein L-like [Pan troglodytes]
gi|410329931|gb|JAA33912.1| heterogeneous nuclear ribonucleoprotein L-like [Pan troglodytes]
Length = 542
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 224
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 225 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 280
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 281 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 333
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 334 GSVVMVSGLHQLKM 347
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 188 VCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKI 239
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 240 EYARPTRLNVIRNDNDSWDYTKPYL 264
>gi|359321615|ref|XP_003639639.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Canis
lupus familiaris]
Length = 545
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 169 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 227
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 228 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 283
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 284 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 336
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 337 GSVVMVSGLHQLKM 350
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 191 VCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKI 242
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 243 EYARPTRLNVIRNDNDSWDYTKPYL 267
>gi|390474560|ref|XP_002757889.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 3
[Callithrix jacchus]
Length = 543
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 167 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 225
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 226 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 281
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 282 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 334
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 335 GSVVMVSGLHQLKM 348
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 189 VCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKI 240
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 241 EYARPTRLNVIRNDNDSWDYTKPYL 265
>gi|410910584|ref|XP_003968770.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein L-like [Takifugu rubripes]
Length = 514
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 83/147 (56%), Gaps = 7/147 (4%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ I+ S + G + S NVLL +I N Y +T DVL+ + + GPVQ
Sbjct: 99 YIAGHPAFINYSTSQKISRPGDSDDSRSVNNVLLFTIMNPIYPITTDVLYTICNNCGPVQ 158
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 159 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 216
Query: 227 RSRDYTLPST---PMVNSQPSILGQQP 250
+ DYT P+ VN+ P+ +QP
Sbjct: 217 ETWDYTNPNLGGPEDVNANPNKRQRQP 243
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 155 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-------GCCTLKIEYAKP 206
Query: 91 TDLSVKFQSHRSRDYTNPYLPVAPSAIDAS 120
T L+V + DYTNP L P ++A+
Sbjct: 207 TRLNVFKNDQETWDYTNPNLG-GPEDVNAN 235
>gi|330840158|ref|XP_003292087.1| hypothetical protein DICPUDRAFT_82723 [Dictyostelium purpureum]
gi|325077693|gb|EGC31389.1| hypothetical protein DICPUDRAFT_82723 [Dictyostelium purpureum]
Length = 748
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
+LL +I N Y VT++ L+ VFS FG V K+ +F K+G Q+LI+ + AV AK L+
Sbjct: 262 ILLITINNYLYNVTIEELYKVFSNFGTVNKVLLFTKSGNYQSLIEMKTPEEAVKAKNNLD 321
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 233
G I C L I +S T L IK NN++SRD+T+
Sbjct: 322 GMNI--NNTCSLKIQFSSLTSLKIKYNNEKSRDFTV 355
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
Query: 22 ERAHVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC 81
E VFS FG V+K+ F K+ +Q+L++ E A AKN LDG +I C
Sbjct: 278 ELYKVFSNFGTVNKVLLFTKSGNYQSLIEMKTPEEAVKAKNNLDGMNIN--------NTC 329
Query: 82 TLRITYSAHTDLSVKFQSHRSRDYT 106
+L+I +S+ T L +K+ + +SRD+T
Sbjct: 330 SLKIQFSSLTSLKIKYNNEKSRDFT 354
>gi|335775957|gb|AEH58745.1| heterogeneous nuclear ribonucleoprotein L-lik-like protein [Equus
caballus]
Length = 424
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 48 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 106
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 107 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 162
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 163 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 215
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 216 GSVVMVSGLHQLKM 229
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 70 VCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKI 121
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 122 EYARPTRLNVIRNDNDSWDYTKPYL 146
>gi|395508191|ref|XP_003758397.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Sarcophilus harrisii]
Length = 500
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 124 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 182
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 183 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 238
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 239 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 291
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 292 GSVVMVSGLHQLKM 305
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 146 VCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKI 197
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 198 EYARPTRLNVIRNDNDSWDYTKPYL 222
>gi|355694958|gb|AER99845.1| heteroproteinous nuclear ribonucleoprotein L-like protein [Mustela
putorius furo]
Length = 380
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 5 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 63
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 64 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 119
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 120 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 172
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 173 GSVVMVSGLHQLKM 186
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 27 VCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKI 78
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 79 EYARPTRLNVIRNDNDSWDYTKPYL 103
>gi|67972328|dbj|BAE02506.1| unnamed protein product [Macaca fascicularis]
Length = 437
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 61 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 119
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 120 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 175
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 176 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 228
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 229 GSVVMVSGLHQLKM 242
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 83 VCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKI 134
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 135 EYARPTRLNVIRNDNDSWDYTKPYL 159
>gi|224046933|ref|XP_002199365.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Taeniopygia guttata]
Length = 546
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 170 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVFCAQKAKAA 228
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 229 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 284
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 285 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 337
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 338 GSVVMVSGLHQLKM 351
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 192 VCNPVGKVQRIVIFKRN-GIQAMVEFESVFCAQKAKAALNGADI-------YAGCCTLKI 243
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 244 EYARPTRLNVIRNDNDSWDYTKPYL 268
>gi|344288860|ref|XP_003416164.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Loxodonta
africana]
Length = 489
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 113 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 171
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 172 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 227
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 228 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 280
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 281 GSVVMVSGLHQLKM 294
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 135 VCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKI 186
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 187 EYARPTRLNVIRNDNDSWDYTKPYL 211
>gi|432889398|ref|XP_004075257.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Oryzias latipes]
Length = 526
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 109/234 (46%), Gaps = 43/234 (18%)
Query: 76 ENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 135
E+M + +TY+A + Y+ P+ I+ S + G +
Sbjct: 81 EDMNGSSTAVTYAADNQV---------------YIAGHPAFINYSTSKKISRPGDSDDSR 125
Query: 136 S--NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 193
S NVLL +I N Y +T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK
Sbjct: 126 SVNNVLLFTIMNPIYPITTDVLYTICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAK 184
Query: 194 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP--------------STPMV 239
+L G IY G C L I Y++ T L++ N+ + DYT P S +
Sbjct: 185 ASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNLGGPDGDADGNGSSAEDM 243
Query: 240 NS-------QPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGA 286
N+ QP++LG P P G + Y+ + PP E M PT G G
Sbjct: 244 NANPNKRPRQPALLGDHP-PEYGGGYHGYD-ENYGSPPYEGRRM-GPTMRGRGG 294
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 155 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-------GCCTLKIEYAKP 206
Query: 91 TDLSVKFQSHRSRDYTNPYLPVAPSAIDASG 121
T L+V + DYTNP L D +G
Sbjct: 207 TRLNVFKNDQDTWDYTNPNLGGPDGDADGNG 237
>gi|443732513|gb|ELU17197.1| hypothetical protein CAPTEDRAFT_161728, partial [Capitella teleta]
Length = 546
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G E + VLL +I N +Y +T+DV+H + S GPV +I +F KN GLQ ++++ ++
Sbjct: 120 GNHEETPNKVLLFTIFNPKYPITVDVMHTIASNNGPVARIVIFRKN-GLQCMVEFETLEG 178
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM--VNSQPSIL 246
A AK AL G IY G C L I Y++ T L++ N+ DYT PS P NS+ + L
Sbjct: 179 AQRAKSALNGADIY-SGCCTLKIEYAKPTRLNVSRNDSEMWDYTTPSGPKSDFNSKSAPL 237
Query: 247 GQQP 250
+P
Sbjct: 238 LAEP 241
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+ S G V +I F K G Q +V+F E A AK+AL+G I G CTL+I
Sbjct: 149 IASNNGPVARIVIFRKN-GLQCMVEFETLEGAQRAKSALNGADI-------YSGCCTLKI 200
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLP 111
Y+ T L+V DYT P P
Sbjct: 201 EYAKPTRLNVSRNDSEMWDYTTPSGP 226
>gi|363731463|ref|XP_414998.3| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Gallus
gallus]
Length = 514
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 138 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVFCAQKAKAA 196
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 197 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 252
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 253 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 305
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 306 GSVVMVSGLHQLKM 319
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 160 VCNPVGKVQRIVIFKRN-GIQAMVEFESVFCAQKAKAALNGADI-------YAGCCTLKI 211
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 212 EYARPTRLNVIRNDNDSWDYTKPYL 236
>gi|41055393|ref|NP_957393.1| heterogeneous nuclear ribonucleoprotein L [Danio rerio]
gi|28278846|gb|AAH45336.1| Zgc:55429 [Danio rerio]
gi|182890552|gb|AAI64693.1| Zgc:55429 protein [Danio rerio]
Length = 536
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 76/129 (58%), Gaps = 4/129 (3%)
Query: 109 YLPVAPSAID--ASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ PS I+ S ++S D +NVLL +I N Y +T DVL+ + + GPVQ
Sbjct: 102 YIAGRPSYINYSTSQKISRPTDSDDTRSVNNVLLLTIMNPIYPITSDVLYTICNNCGPVQ 161
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 162 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 219
Query: 227 RSRDYTLPS 235
+ DYT P+
Sbjct: 220 DTWDYTNPN 228
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+ + G V +I F K G QA+V+F ++A AK +L+G I G CTL+I
Sbjct: 153 ICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-------GCCTLKI 204
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLD 128
Y+ T L+V + DYTNP L + DA G + D
Sbjct: 205 EYAKPTRLNVFKNDQDTWDYTNPNL--SGQDADADGNWNNSQD 245
>gi|47224789|emb|CAG06359.1| unnamed protein product [Tetraodon nigroviridis]
Length = 609
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 90/164 (54%), Gaps = 11/164 (6%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ I+ S + G + S NVLL +I N Y +T DVL+ + + GPVQ
Sbjct: 99 YIAGHPAFINYSTSQKISRPGDSDDSRSVNNVLLFTIMNPIYPITTDVLYTICNNCGPVQ 158
Query: 167 KIAMFDKNGGLQALIQYP---DVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKV 223
+I +F KN G+QA+++YP VQ+A AK +L G IY G C L I Y++ T L++
Sbjct: 159 RIVIFRKN-GVQAMVEYPFIDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFK 216
Query: 224 NNDRSRDYTLPST---PMVNSQPSILGQQPVPMVGATANQYNGA 264
N+ + DYT P+ VN+ P+ +QP ++G +Y G
Sbjct: 217 NDQETWDYTNPNLGGPEDVNANPNKRQRQPA-LLGDHPPEYGGG 259
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 12/93 (12%)
Query: 31 GFVHKITTFEKTAGFQALVQF---SDTETASSAKNALDGRSIPRYLLPENMGPCTLRITY 87
G V +I F K G QA+V++ ++A AK +L+G I G CTL+I Y
Sbjct: 155 GPVQRIVIFRKN-GVQAMVEYPFIDSVQSAQRAKASLNGADI-------YSGCCTLKIEY 206
Query: 88 SAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDAS 120
+ T L+V + DYTNP L P ++A+
Sbjct: 207 AKPTRLNVFKNDQETWDYTNPNLG-GPEDVNAN 238
>gi|242023546|ref|XP_002432193.1| Polypyrimidine tract-binding protein, putative [Pediculus humanus
corporis]
gi|212517590|gb|EEB19455.1| Polypyrimidine tract-binding protein, putative [Pediculus humanus
corporis]
Length = 513
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 65/103 (63%), Gaps = 8/103 (7%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN-GGLQALIQYPDVQTAVVAKE 194
+ VL IE+M Y VTLDVL+ V +KI + ++ QALIQYPDV TA AK
Sbjct: 136 NTVLRVIIEHMVYPVTLDVLYKVR------RKILLTRQSFRSFQALIQYPDVITAQAAKL 189
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
+L+G IY+ C L I YS+ + L++K NND+SRDYT P+ P
Sbjct: 190 SLDGRNIYNSC-CTLRIEYSKLSALNVKYNNDKSRDYTNPNLP 231
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 7/76 (9%)
Query: 36 ITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSV 95
+ T + FQAL+Q+ D TA +AK +LDGR+I CTLRI YS + L+V
Sbjct: 163 LLTRQSFRSFQALIQYPDVITAQAAKLSLDGRNIYN-------SCCTLRIEYSKLSALNV 215
Query: 96 KFQSHRSRDYTNPYLP 111
K+ + +SRDYTNP LP
Sbjct: 216 KYNNDKSRDYTNPNLP 231
>gi|427796049|gb|JAA63476.1| Putative heteroproteinous nuclear ribonucleoprotein l, partial
[Rhipicephalus pulchellus]
Length = 523
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 74/114 (64%), Gaps = 3/114 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
++VLL +I N Y +T+DV+H + + G V +I +F KNG +QA++++ V+ AV AK++
Sbjct: 115 NHVLLMTILNPAYPITVDVIHTICTPSGKVMRIVIFKKNG-VQAMVEFDGVEAAVRAKKS 173
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ-PSILGQ 248
L G IY G C L I Y++ T L++ N++ S DYT P+ S+ P++LG+
Sbjct: 174 LNGADIYSG-CCTLKIEYAKPTRLNVYKNDNDSWDYTNPNLGKSGSERPALLGE 226
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F+K G QA+V+F E A AK +L+G I G CTL+I Y+
Sbjct: 142 GKVMRIVIFKKN-GVQAMVEFDGVEAAVRAKKSLNGADI-------YSGCCTLKIEYAKP 193
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + S DYTNP L
Sbjct: 194 TRLNVYKNDNDSWDYTNPNL 213
>gi|297307105|ref|NP_001167465.1| heterogeneous nuclear ribonucleoprotein L [Xenopus laevis]
gi|50416457|gb|AAH77493.1| Unknown (protein for MGC:82601) [Xenopus laevis]
Length = 538
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 15/149 (10%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+NVLL +I N Y++T DVL+ + + GPV++I +F KN G+QA++++ VQ+A AK +
Sbjct: 142 NNVLLLTILNPIYSITTDVLYTICNPCGPVERIVIFRKN-GVQAMVEFDSVQSAQRAKAS 200
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP----------MVNSQPSI 245
L G IY G C L I Y++ + L++ N+ + DYT P P +
Sbjct: 201 LNGADIYS-GCCTLKIEYAKPSRLNVFKNDQDTWDYTNPGLSGQGDAAGNPNKRQRNPPL 259
Query: 246 LGQQPVPMVGATA---NQYNGAQFAPPPP 271
LG P G A Y+ + PPPP
Sbjct: 260 LGDHPAEYGGPHAGYHGHYHEEAYGPPPP 288
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 169 GPVERIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 220
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
+ L+V + DYTNP L
Sbjct: 221 SRLNVFKNDQDTWDYTNPGL 240
>gi|154147563|ref|NP_001093751.1| heterogeneous nuclear ribonucleoprotein L [Xenopus (Silurana)
tropicalis]
gi|140832702|gb|AAI35425.1| hnrpl protein [Xenopus (Silurana) tropicalis]
Length = 538
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 15/149 (10%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+NVLL +I N Y++T DVL+ + + GPVQ+I +F KN G+QA++++ +Q+A AK +
Sbjct: 142 NNVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSMQSAQRAKAS 200
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP----------MVNSQPSI 245
L G IY G C L I Y++ + L++ N+ + DYT P+ P +
Sbjct: 201 LNGADIYS-GCCTLKIEYAKPSRLNVFKNDQDTWDYTNPALSGQGDAAGNPNKRQRNPPL 259
Query: 246 LGQQPVPMVGATA---NQYNGAQFAPPPP 271
LG P G A Y+ + PPPP
Sbjct: 260 LGDHPAEYGGPHAGYHGHYHEEAYGPPPP 288
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 169 GPVQRIVIFRKN-GVQAMVEFDSMQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 220
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
+ L+V + DYTNP L
Sbjct: 221 SRLNVFKNDQDTWDYTNPAL 240
>gi|387018124|gb|AFJ51180.1| Heterogeneous nuclear ribonucleoprotein L-like [Crotalus
adamanteus]
Length = 539
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 95/191 (49%), Gaps = 16/191 (8%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 163 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 221
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 222 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 277
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA-------VPPASQSMPMMGNHPYMPPGSM 308
+ + + P P+ + A +P AS S GN P GS+
Sbjct: 278 EHPSSFRHDGYGSHGPLLPLPSRYRMASRDTPELVAYPLPQASSSYMHGGN----PSGSV 333
Query: 309 PMGPGMMQMHM 319
M G+ Q M
Sbjct: 334 VMVSGLHQQKM 344
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 185 VCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKI 236
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 237 EYARPTRLNVIRNDNDSWDYTKPYL 261
>gi|392339204|ref|XP_003753752.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein L-like [Rattus norvegicus]
Length = 609
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 17/177 (9%)
Query: 109 YLPVAPSAID--ASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ I+ S ++S D + + ++VLL +I N Y++T DVL+ + + GP+Q
Sbjct: 185 YIAGHPAFINYCTSQKISRPGDSEDSQSINSVLLFTILNPIYSITTDVLYTICNPCGPIQ 244
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+ +F +N G+QA++++ VQ+A AK +L+G IY G C L I Y++ T L++ NN
Sbjct: 245 RTVIFREN-GVQAMVEFDSVQSAQSAKASLDGADIY-SGCCTLTIEYAKPTRLNVSKNNQ 302
Query: 227 RSRDYTLP-----STPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPP 270
+ DYT P P N QP +LG P G + Y+ + PPP
Sbjct: 303 DTWDYTNPXLSGQGDPGSNHNECQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYXPPP 359
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 37 TTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSVK 96
T + G QA+V+F ++A SAK +LDG I G CTL I Y+ T L+V
Sbjct: 246 TVIFRENGVQAMVEFDSVQSAQSAKASLDGADI-------YSGCCTLTIEYAKPTRLNVS 298
Query: 97 FQSHRSRDYTNPYL 110
+ + DYTNP L
Sbjct: 299 KNNQDTWDYTNPXL 312
>gi|335308902|ref|XP_003361415.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Sus
scrofa]
Length = 552
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 177 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 235
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 236 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 291
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 292 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 344
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 345 GSVVMVSGLHQLKM 358
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA++ F A AK AL+G I G CTL+I
Sbjct: 199 VCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------YAGCCTLKI 250
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 251 EYARPTRLNVIRNDNDSWDYTKPYL 275
>gi|291386911|ref|XP_002709958.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Oryctolagus cuniculus]
Length = 541
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 165 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 223
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 224 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 279
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 280 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 332
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 333 GSVVMVSGLHQLKM 346
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA++ F A AK AL+G I G CTL+I
Sbjct: 187 VCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------YAGCCTLKI 238
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 239 EYARPTRLNVIRNDNDSWDYTKPYL 263
>gi|338714336|ref|XP_001918049.2| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein L-like [Equus caballus]
Length = 543
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 167 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLTFESVLCAQKAKAA 225
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 226 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 281
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 282 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 334
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 335 GSVVMVSGLHQLKM 348
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA++ F A AK AL+G I G CTL+I
Sbjct: 189 VCNPVGKVQRIVIFKRN-GIQAMLTFESVLCAQKAKAALNGADI-------YAGCCTLKI 240
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 241 EYARPTRLNVIRNDNDSWDYTKPYL 265
>gi|326915072|ref|XP_003203845.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Meleagris gallopavo]
Length = 489
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 113 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVFCAQKAKAA 171
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 172 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 227
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P G+ +P AS S GN P
Sbjct: 228 EHPSSFRHDGYGSHGPLLPL---PNRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 280
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 281 GSVVMVSGLHQLKM 294
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 135 VCNPVGKVQRIVIFKRN-GIQAMVEFESVFCAQKAKAALNGADI-------YAGCCTLKI 186
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 187 EYARPTRLNVIRNDNDSWDYTKPYL 211
>gi|109102683|ref|XP_001109932.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Macaca mulatta]
Length = 542
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 224
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 225 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 280
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 281 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 333
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 334 GSVVMVSGLHQLKM 347
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA++ F A AK AL+G I G CTL+I
Sbjct: 188 VCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------YAGCCTLKI 239
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 240 EYARPTRLNVIRNDNDSWDYTKPYL 264
>gi|332227246|ref|XP_003262804.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein L-like [Nomascus leucogenys]
Length = 542
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 224
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 225 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 280
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 281 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 333
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 334 GSVVMVSGLHQLKM 347
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA++ F A AK AL+G I G CTL+I
Sbjct: 188 VCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------YAGCCTLKI 239
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 240 EYARPTRLNVIRNDNDSWDYTKPYL 264
>gi|291386909|ref|XP_002709957.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Oryctolagus cuniculus]
Length = 547
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 171 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 229
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 230 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 285
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 286 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 338
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 339 GSVVMVSGLHQLKM 352
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA++ F A AK AL+G I G CTL+I
Sbjct: 193 VCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------YAGCCTLKI 244
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 245 EYARPTRLNVIRNDNDSWDYTKPYL 269
>gi|109102685|ref|XP_001109971.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 3
[Macaca mulatta]
Length = 537
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 161 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 219
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 220 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 275
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 276 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 328
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 329 GSVVMVSGLHQLKM 342
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA++ F A AK AL+G I G CTL+I
Sbjct: 183 VCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------YAGCCTLKI 234
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 235 EYARPTRLNVIRNDNDSWDYTKPYL 259
>gi|410955434|ref|XP_003984358.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Felis catus]
Length = 544
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 168 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 226
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 227 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 282
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 283 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 335
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 336 GSVVMVSGLHQLKM 349
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA++ F A AK AL+G I G CTL+I
Sbjct: 190 VCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------YAGCCTLKI 241
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 242 EYARPTRLNVIRNDNDSWDYTKPYL 266
>gi|397493589|ref|XP_003817686.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Pan paniscus]
Length = 539
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 163 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 221
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 222 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 277
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 278 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 330
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 331 GSVVMVSGLHQLKM 344
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA++ F A AK AL+G I G CTL+I
Sbjct: 185 VCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------YAGCCTLKI 236
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 237 EYARPTRLNVIRNDNDSWDYTKPYL 261
>gi|440907649|gb|ELR57769.1| Heterogeneous nuclear ribonucleoprotein L-like protein [Bos
grunniens mutus]
Length = 541
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 165 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 223
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 224 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 279
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 280 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 332
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 333 GSVVMVSGLHQLKM 346
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA++ F A AK AL+G I G CTL+I
Sbjct: 187 VCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------YAGCCTLKI 238
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 239 EYARPTRLNVIRNDNDSWDYTKPYL 263
>gi|392346115|ref|XP_003749467.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein L-like, partial [Rattus norvegicus]
Length = 582
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 17/177 (9%)
Query: 109 YLPVAPSAID--ASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ I+ S ++S D + + ++VLL +I N Y++T DVL+ + + GP+Q
Sbjct: 158 YIAGHPAFINYCTSQKISRPGDSEDSQSINSVLLFTILNPIYSITTDVLYTICNPCGPIQ 217
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+ +F +N G+QA++++ VQ+A AK +L+G IY G C L I Y++ T L++ NN
Sbjct: 218 RTVIFREN-GVQAMVEFDSVQSAQSAKASLDGADIY-SGCCTLTIEYAKPTRLNVSKNNQ 275
Query: 227 RSRDYTLP-----STPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPP 270
+ DYT P P N QP +LG P G + Y+ + PPP
Sbjct: 276 DTWDYTNPXLSGQGDPGSNHNECQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYXPPP 332
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 37 TTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSVK 96
T + G QA+V+F ++A SAK +LDG I G CTL I Y+ T L+V
Sbjct: 219 TVIFRENGVQAMVEFDSVQSAQSAKASLDGADI-------YSGCCTLTIEYAKPTRLNVS 271
Query: 97 FQSHRSRDYTNPYL 110
+ + DYTNP L
Sbjct: 272 KNNQDTWDYTNPXL 285
>gi|410035016|ref|XP_001168474.3| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 4
[Pan troglodytes]
gi|426335280|ref|XP_004029156.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Gorilla
gorilla gorilla]
gi|119620773|gb|EAX00368.1| heterogeneous nuclear ribonucleoprotein L-like, isoform CRA_a [Homo
sapiens]
Length = 537
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 161 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 219
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 220 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 275
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 276 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 328
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 329 GSVVMVSGLHQLKM 342
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA++ F A AK AL+G I G CTL+I
Sbjct: 183 VCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------YAGCCTLKI 234
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 235 EYARPTRLNVIRNDNDSWDYTKPYL 259
>gi|119620776|gb|EAX00371.1| heterogeneous nuclear ribonucleoprotein L-like, isoform CRA_d [Homo
sapiens]
gi|119620777|gb|EAX00372.1| heterogeneous nuclear ribonucleoprotein L-like, isoform CRA_d [Homo
sapiens]
Length = 542
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 224
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 225 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 280
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 281 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 333
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 334 GSVVMVSGLHQLKM 347
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA++ F A AK AL+G I G CTL+I
Sbjct: 188 VCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------YAGCCTLKI 239
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 240 EYARPTRLNVIRNDNDSWDYTKPYL 264
>gi|355565619|gb|EHH22048.1| hypothetical protein EGK_05237 [Macaca mulatta]
Length = 542
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 224
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 225 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 280
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 281 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 333
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 334 GSVVMVSGLHQLKM 347
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA++ F A AK AL+G I G CTL+I
Sbjct: 188 VCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------YAGCCTLKI 239
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 240 EYARPTRLNVIRNDNDSWDYTKPYL 264
>gi|281350475|gb|EFB26059.1| hypothetical protein PANDA_013339 [Ailuropoda melanoleuca]
Length = 368
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 169 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 227
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 228 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 283
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 284 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 336
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 337 GSVVMVSGLHQLKM 350
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA++ F A AK AL+G I G CTL+I
Sbjct: 191 VCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------YAGCCTLKI 242
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 243 EYARPTRLNVIRNDNDSWDYTKPYL 267
>gi|325184968|emb|CCA19460.1| hypothetical protein SELMODRAFT_173175 [Albugo laibachii Nc14]
Length = 466
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 109/229 (47%), Gaps = 31/229 (13%)
Query: 24 AHVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTL 83
A +FS FG V KI FEK G Q L+Q S E A++AK AL+G +I P+ C L
Sbjct: 151 ASIFSYFGKVEKIVIFEKAIGLQCLIQLSFIEDATAAKKALNGVNI----FPD---CCCL 203
Query: 84 RITYSAHT-DLSVKFQSHRSRDYTNPYLPVAP------------SAIDASGQLSVGLDGK 130
I YS + +L VK R+ D+TN L P AI+ + + +
Sbjct: 204 IIHYSKLSQELVVKTNGPRTWDFTNSNLSNQPDGNEADIALETCEAINKAAFATANMTNS 263
Query: 131 KLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAV 190
E E+ VL S N++ +VT D L +FS +G V ++ F+ AL+Q+ A
Sbjct: 264 GQEIETLVLFVS--NLRESVTCDQLFNLFSCYGNVARVKKFNSKPD-HALVQFSTPAFAQ 320
Query: 191 VAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMV 239
A L G ++ L I++S+H +++ + +++ ST MV
Sbjct: 321 SALLHLRGFTLFGRS---LEITFSKHAYINVSAGSSKTK-----STGMV 361
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 60/96 (62%), Gaps = 2/96 (2%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
+LL +++N Y +T D++ +FS FG V+KI +F+K GLQ LIQ ++ A AK+AL
Sbjct: 133 ILLVTVQNPLYPITADLMASIFSYFGKVEKIVIFEKAIGLQCLIQLSFIEDATAAKKALN 192
Query: 198 GHCIYDGGFCKLHISYSRHT-DLSIKVNNDRSRDYT 232
G I+ C L I YS+ + +L +K N R+ D+T
Sbjct: 193 GVNIFPDCCC-LIIHYSKLSQELVVKTNGPRTWDFT 227
>gi|395745998|ref|XP_003778369.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1-like [Pongo abelii]
Length = 551
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 90/169 (53%), Gaps = 17/169 (10%)
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDA--SGQLSV-----GLD-GKKLEPES 136
I +S H L +++RD A A+++ SG L++ +D G + +S
Sbjct: 128 IQFSNHKGLKTDSSPNQARDLA------AXQAVNSVQSGNLALTAPAAAVDAGMAMAGQS 181
Query: 137 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 196
VL +EN+ Y +TLDVLH +FS FG V I F K+ QAL+QY D + A AK +L
Sbjct: 182 PVLRIIVENLFYPMTLDVLHQIFSKFGKVNTIT-FIKDNQFQALLQYADPENAQHAKLSL 240
Query: 197 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
+ Y+ L I +S+ T L+++ ND+S DY P P +SQPS+
Sbjct: 241 DWQNTYNACIT-LCIDFSKLTSLNVRY-NDKSSDYXRPDLPSRDSQPSL 287
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 114/246 (46%), Gaps = 57/246 (23%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+FS FG V+ IT F K FQAL+Q++D E A AK +LD ++ + TL I
Sbjct: 203 IFSKFGKVNTIT-FIKDNQFQALLQYADPENAQHAKLSLDWQNTYNACI-------TLCI 254
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLP--------------------------VAPSAI-- 117
+S T L+V++ +S DY P LP +AP AI
Sbjct: 255 DFSKLTSLNVRYND-KSSDYXRPDLPSRDSQPSLDQXMAAAFDLSVPNIHGALAPLAIPL 313
Query: 118 -----DASGQLSV-GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM- 170
A+G+++ GL G ++VLL S N + VT L ++FS +G VQ + +
Sbjct: 314 AVAAAAAAGRIATPGLAGAG----NSVLLVSNLNPER-VTPQSLFILFSVYGDVQCVKIS 368
Query: 171 FDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKL-HISYSRHTDLSI----KVNN 225
F+K AL+Q D A +A H ++ +L I+ S+H ++ + + +
Sbjct: 369 FNKEN---ALVQMADGNQAQLALSHRNWHKLHGKPPHRLVRITPSKHQNVQLPREGREDQ 425
Query: 226 DRSRDY 231
D ++DY
Sbjct: 426 DLTKDY 431
>gi|119577231|gb|EAW56827.1| heterogeneous nuclear ribonucleoprotein L, isoform CRA_b [Homo
sapiens]
Length = 590
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 94/179 (52%), Gaps = 18/179 (10%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 163 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 222
Query: 167 KIAMFDKNGGLQALIQYPDVQ-TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN 225
+I +F KN G+QA+++YP ++ +A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 223 RIVIFRKN-GVQAMVEYPLLENSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKND 280
Query: 226 DRSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 281 QDTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 339
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTE-TASSAKNALDGRSIPRYLLPENMGPCTLRITYSA 89
G V +I F K G QA+V++ E +A AK +L+G I G CTL+I Y+
Sbjct: 219 GPVQRIVIFRKN-GVQAMVEYPLLENSAQRAKASLNGADI-------YSGCCTLKIEYAK 270
Query: 90 HTDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 271 PTRLNVFKNDQDTWDYTNPNL 291
>gi|402890606|ref|XP_003908574.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Papio anubis]
gi|119620774|gb|EAX00369.1| heterogeneous nuclear ribonucleoprotein L-like, isoform CRA_b [Homo
sapiens]
Length = 437
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 61 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 119
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 120 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 175
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 176 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 228
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 229 GSVVMVSGLHQLKM 242
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA++ F A AK AL+G I G CTL+I
Sbjct: 83 VCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------YAGCCTLKI 134
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 135 EYARPTRLNVIRNDNDSWDYTKPYL 159
>gi|343961675|dbj|BAK62427.1| heterogeneous nuclear ribonucleoprotein L-like protein [Pan
troglodytes]
Length = 513
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 94/185 (50%), Gaps = 28/185 (15%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 161 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 219
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P S +L P+P
Sbjct: 220 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYLGRRGSHGPLL---PLP--- 272
Query: 256 ATANQYN-GAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMGPGM 314
++Y G++ P P+ P AS S GN P GS+ M G+
Sbjct: 273 ---SRYRMGSRDTPELVAYPL------------PQASSSYMHGGN----PSGSVVMVSGL 313
Query: 315 MQMHM 319
Q+ M
Sbjct: 314 HQLKM 318
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 183 VCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKI 234
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 235 EYARPTRLNVIRNDNDSWDYTKPYL 259
>gi|355755804|gb|EHH59551.1| hypothetical protein EGM_09690, partial [Macaca fascicularis]
Length = 501
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 94/179 (52%), Gaps = 18/179 (10%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 74 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 133
Query: 167 KIAMFDKNGGLQALIQYPDVQ-TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN 225
+I +F KN G+QA+++YP ++ +A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 134 RIVIFRKN-GVQAMVEYPLLENSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKND 191
Query: 226 DRSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 192 QDTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 250
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTE-TASSAKNALDGRSIPRYLLPENMGPCTLRITYSA 89
G V +I F K G QA+V++ E +A AK +L+G I G CTL+I Y+
Sbjct: 130 GPVQRIVIFRKN-GVQAMVEYPLLENSAQRAKASLNGADI-------YSGCCTLKIEYAK 181
Query: 90 HTDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 182 PTRLNVFKNDQDTWDYTNPNL 202
>gi|426226432|ref|XP_004007347.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Ovis
aries]
Length = 507
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 131 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 189
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 190 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 245
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 246 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 298
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 299 GSVVMVSGLHQLKM 312
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F++ G QA++ F A AK AL+G I G CTL+I Y+
Sbjct: 158 GKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------YAGCCTLKIEYARP 209
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + S DYT PYL
Sbjct: 210 TRLNVIRNDNDSWDYTKPYL 229
>gi|348574608|ref|XP_003473082.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Cavia
porcellus]
Length = 541
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 96/194 (49%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA+ + V A AK A
Sbjct: 165 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMFMFESVLCAQKAKAA 223
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 224 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 279
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 280 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 332
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 333 GSVVMVSGLHQLKM 346
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+ F A AK AL+G I G CTL+I
Sbjct: 187 VCNPVGKVQRIVIFKRN-GIQAMFMFESVLCAQKAKAALNGADI-------YAGCCTLKI 238
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 239 EYARPTRLNVIRNDNDSWDYTKPYL 263
>gi|66809907|ref|XP_638677.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60467316|gb|EAL65349.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 892
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
+LL +I N Y +T+D L VFS +G + KI +F K+G Q+LI+ + A AK L+
Sbjct: 400 ILLVTISNYFYNITIDELFKVFSHYGTILKILLFTKSGNYQSLIEMKTPEEATKAKNVLD 459
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 233
G I + C L I YS T L IK NN++SRD+T+
Sbjct: 460 GVNINNS--CSLKIQYSSLTSLKIKYNNEKSRDFTV 493
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
Query: 22 ERAHVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC 81
E VFS +G + KI F K+ +Q+L++ E A+ AKN LDG +I C
Sbjct: 416 ELFKVFSHYGTILKILLFTKSGNYQSLIEMKTPEEATKAKNVLDGVNIN--------NSC 467
Query: 82 TLRITYSAHTDLSVKFQSHRSRDYT 106
+L+I YS+ T L +K+ + +SRD+T
Sbjct: 468 SLKIQYSSLTSLKIKYNNEKSRDFT 492
>gi|327262697|ref|XP_003216160.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Anolis
carolinensis]
Length = 551
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 71/120 (59%), Gaps = 7/120 (5%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 175 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 233
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS-----QPSILGQQP 250
L G IY G C L I Y+R T L++ N++ S DYT P + + +ILG+ P
Sbjct: 234 LNGADIY-AGCCTLKIEYARPTRLNVTQNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHP 292
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 197 VCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKI 248
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 249 EYARPTRLNVTQNDNDSWDYTKPYL 273
>gi|74147193|dbj|BAE27500.1| unnamed protein product [Mus musculus]
Length = 670
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 95/190 (50%), Gaps = 14/190 (7%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 294 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 352
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 353 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 408
Query: 256 ATANQYNGAQFAP-----PPPEQPMMHQPTAAGWGAVP-PASQSMPMMGNHPYMPPGSMP 309
+ + + P P + M A P P + S M G P GS+
Sbjct: 409 DHPSSFRHDGYGSHGPLLPLPSRYRMGSRDTPELVAYPLPQASSSYMHGGS---PSGSVV 465
Query: 310 MGPGMMQMHM 319
M G+ Q+ M
Sbjct: 466 MVSGLHQLKM 475
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 316 VCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKI 367
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 368 EYARPTRLNVIRNDNDSWDYTKPYL 392
>gi|293347913|ref|XP_001063027.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Rattus
norvegicus]
gi|293359746|ref|XP_233805.5| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Rattus
norvegicus]
Length = 591
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 95/190 (50%), Gaps = 14/190 (7%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 215 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 273
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 274 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 329
Query: 256 ATANQYNGAQFAP-----PPPEQPMMHQPTAAGWGAVP-PASQSMPMMGNHPYMPPGSMP 309
+ + + P P + M A P P + S M G P GS+
Sbjct: 330 DHPSSFRHDGYGSHGPLLPLPSRYRMGSRDTPELVAYPLPQASSSYMHGGS---PSGSVV 386
Query: 310 MGPGMMQMHM 319
M G+ Q+ M
Sbjct: 387 MVSGLHQLKM 396
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 237 VCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKI 288
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 289 EYARPTRLNVIRNDNDSWDYTKPYL 313
>gi|37514843|gb|AAH12849.2| Hnrpll protein [Mus musculus]
Length = 594
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 95/190 (50%), Gaps = 14/190 (7%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 218 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 276
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 277 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 332
Query: 256 ATANQYNGAQFAP-----PPPEQPMMHQPTAAGWGAVP-PASQSMPMMGNHPYMPPGSMP 309
+ + + P P + M A P P + S M G P GS+
Sbjct: 333 DHPSSFRHDGYGSHGPLLPLPSRYRMGSRDTPELVAYPLPQASSSYMHGGS---PSGSVV 389
Query: 310 MGPGMMQMHM 319
M G+ Q+ M
Sbjct: 390 MVSGLHQLKM 399
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 240 VCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKI 291
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 292 EYARPTRLNVIRNDNDSWDYTKPYL 316
>gi|12849891|dbj|BAB28521.1| unnamed protein product [Mus musculus]
Length = 588
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 212 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 270
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 271 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 326
Query: 256 ATANQYNGAQFAP-----PPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPM 310
+ + + P P + M A P S M H P GS+ M
Sbjct: 327 DHPSSFRHDGYGSHGPLLPLPSRYRMGSRDTPELVAYPLPQASSSYM--HGGSPSGSVVM 384
Query: 311 GPGMMQMHM 319
G+ Q+ M
Sbjct: 385 VSGLHQLKM 393
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 234 VCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKI 285
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 286 EYARPTRLNVIRNDNDSWDYTKPYL 310
>gi|110347535|ref|NP_659051.3| heterogeneous nuclear ribonucleoprotein L-like [Mus musculus]
gi|62286942|sp|Q921F4.3|HNRLL_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein L-like
Length = 591
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 95/190 (50%), Gaps = 14/190 (7%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 215 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 273
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 274 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 329
Query: 256 ATANQYNGAQFAP-----PPPEQPMMHQPTAAGWGAVP-PASQSMPMMGNHPYMPPGSMP 309
+ + + P P + M A P P + S M G P GS+
Sbjct: 330 DHPSSFRHDGYGSHGPLLPLPSRYRMGSRDTPELVAYPLPQASSSYMHGGS---PSGSVV 386
Query: 310 MGPGMMQMHM 319
M G+ Q+ M
Sbjct: 387 MVSGLHQLKM 396
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 237 VCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKI 288
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 289 EYARPTRLNVIRNDNDSWDYTKPYL 313
>gi|330789887|ref|XP_003283030.1| hypothetical protein DICPUDRAFT_85687 [Dictyostelium purpureum]
gi|325087102|gb|EGC40483.1| hypothetical protein DICPUDRAFT_85687 [Dictyostelium purpureum]
Length = 488
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Query: 137 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 196
N++L +I N Y +T + LH + S +G V +I +F K GLQA +++ +A AKE L
Sbjct: 135 NIILCTILNPFYPITTNTLHTIMSPYGRVLRIVIFQKKSGLQAFVEFDSPYSANTAKETL 194
Query: 197 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 234
G+ IY CKL I ++R + L++K N++++ DYT P
Sbjct: 195 NGYNIYTEC-CKLQIEFARVSKLNVKQNDEKTADYTTP 231
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 114/250 (45%), Gaps = 46/250 (18%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+ S +G V +I F+K +G QA V+F +A++AK L+G +I C L+I
Sbjct: 156 IMSPYGRVLRIVIFQKKSGLQAFVEFDSPYSANTAKETLNGYNIYTEC-------CKLQI 208
Query: 86 TYSAHTDLSVKFQSHRSRDYTNP-----YLPVAPSAID----ASGQLSVG-------LDG 129
++ + L+VK ++ DYT P L +P + A+G G ++G
Sbjct: 209 EFARVSKLNVKQNDEKTADYTTPDFYSQQLIQSPQGMQMYHHAAGSNPFGASHGAGFING 268
Query: 130 KKLE--------------PES-NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN 174
+ PES N + S+ + + D L +F +G V KI M +
Sbjct: 269 GGPQQYGGAPYMYPAVGNPESVNQPVISVSKIPEDIDTDKLFNLFCLYGNVIKIKMLHNS 328
Query: 175 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 234
G A++Q D A +A + L IY K++ +++H + V++++++DY+
Sbjct: 329 KG-SAMVQMGDSIQAEIAVQCLNHSFIYGQ---KINCYHTKHPFI---VDSEKTKDYSKS 381
Query: 235 S-TPMVNSQP 243
+ +NSQP
Sbjct: 382 TLNRFLNSQP 391
>gi|348522987|ref|XP_003449005.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Oreochromis niloticus]
Length = 527
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 41/217 (18%)
Query: 76 ENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID--ASGQLSVGLDGKKLE 133
E+M + +TY+A + Y+ P+ I+ S ++S D
Sbjct: 81 EDMNGSSTAVTYAADNQV---------------YIAGHPAFINYSTSQKISRPGDSDDSR 125
Query: 134 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 193
+NVLL +I N Y +T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK
Sbjct: 126 TVNNVLLFTIMNPIYPITTDVLYTICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAK 184
Query: 194 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP--------------STPMV 239
+L G IY G C L I Y++ T L++ N+ + DYT P + V
Sbjct: 185 ASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNLGGPDGDADGNGSNADDV 243
Query: 240 NS-------QPSILGQQPVPMVGATANQYNGAQFAPP 269
N+ QP++LG P P G + Y+ + +PP
Sbjct: 244 NANPNKRQRQPALLGDHP-PEYGGGYHGYDESYGSPP 279
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 155 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-------GCCTLKIEYAKP 206
Query: 91 TDLSVKFQSHRSRDYTNPYLPVAPSAIDASG 121
T L+V + DYTNP L D +G
Sbjct: 207 TRLNVFKNDQDTWDYTNPNLGGPDGDADGNG 237
>gi|302790736|ref|XP_002977135.1| hypothetical protein SELMODRAFT_443468 [Selaginella moellendorffii]
gi|300155111|gb|EFJ21744.1| hypothetical protein SELMODRAFT_443468 [Selaginella moellendorffii]
Length = 466
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
Query: 134 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 193
P S VL ++ N Y + + VLH VFS G V+KI + + G+ IQ+ V+TA K
Sbjct: 126 PSSKVLAVTVTNPIYPIDVYVLHRVFSPHGSVEKITI-SRKLGICGYIQFDSVKTAAHVK 184
Query: 194 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP-MVNSQPSILGQQPVP 252
+ L I+DG CK+ I Y++ +L + N+D +RD+ S P V S PSILG PV
Sbjct: 185 DLLNDRHIFDGC-CKMEIQYAKSQELGVYFNDDNNRDFKDTSIPSRVRSDPSILGAPPVE 243
Query: 253 MVGA 256
V A
Sbjct: 244 SVPA 247
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 95/226 (42%), Gaps = 37/226 (16%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
VFS G V KIT K G +QF +TA+ K+ L+ R I G C +
Sbjct: 149 RVFSPHGSVEKITISRKL-GICGYIQFDSVKTAAHVKDLLNDRHIFD-------GCCKME 200
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA----PSAIDASGQLSV-GLDGKK-------- 131
I Y+ +L V F +RD+ + +P PS + A SV L +
Sbjct: 201 IQYAKSQELGVYFNDDNNRDFKDTSIPSRVRSDPSILGAPPVESVPALTAEDAAAGAPAV 260
Query: 132 -----LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 186
+ V+ S N++ V D L +FS +G ++K+ + G Q LI+ D
Sbjct: 261 VPTPFIGRRKRVVRVSNLNVE-KVDEDKLFNLFSPYGKIRKVQVIKVTG--QGLIEMSDA 317
Query: 187 QTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 232
A +A L+G +++ + + ++N ++SRDYT
Sbjct: 318 FQAELASACLKGARVFEKELDTVVVDK--------ELNLNQSRDYT 355
>gi|351715514|gb|EHB18433.1| Heterogeneous nuclear ribonucleoprotein L-like protein, partial
[Heterocephalus glaber]
Length = 479
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 96/194 (49%), Gaps = 22/194 (11%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA+ + V A AK A
Sbjct: 103 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMFMFESVLCAQKAKAA 161
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 162 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 217
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 218 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 270
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 271 GSVVMVSGLHQLKM 284
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+ F A AK AL+G I G CTL+I
Sbjct: 125 VCNPVGKVQRIVIFKRN-GIQAMFMFESVLCAQKAKAALNGADI-------YAGCCTLKI 176
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 177 EYARPTRLNVIRNDNDSWDYTKPYL 201
>gi|197927211|ref|NP_001128232.1| heterogeneous nuclear ribonucleoprotein L isoform a [Rattus
norvegicus]
Length = 623
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 84/155 (54%), Gaps = 14/155 (9%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 160 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 219
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 220 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 277
Query: 227 RSRDYTLPS-----TPMVN-----SQPSILGQQPV 251
+ DYT P+ P N QP +LG P
Sbjct: 278 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPA 312
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 216 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 267
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 268 TRLNVFKNDQDTWDYTNPNL 287
>gi|417401975|gb|JAA47851.1| Putative hnrnp-l/ptb/hephaestus splicing factor family [Desmodus
rotundus]
Length = 502
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 224
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 234
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 225 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 262
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 188 VCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKI 239
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 240 EYARPTRLNVIRNDNDSWDYTKPYL 264
>gi|432889400|ref|XP_004075258.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 3
[Oryzias latipes]
Length = 490
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 19/162 (11%)
Query: 76 ENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 135
E+M + +TY+A + Y+ P+ I+ S + G +
Sbjct: 81 EDMNGSSTAVTYAADNQV---------------YIAGHPAFINYSTSKKISRPGDSDDSR 125
Query: 136 S--NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 193
S NVLL +I N Y +T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK
Sbjct: 126 SVNNVLLFTIMNPIYPITTDVLYTICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAK 184
Query: 194 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
+L G IY G C L I Y++ T L++ N+ + DYT P+
Sbjct: 185 ASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPN 225
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 155 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-------GCCTLKIEYAKP 206
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 207 TRLNVFKNDQDTWDYTNPNL 226
>gi|417402541|gb|JAA48116.1| Putative hnrnp-l/ptb/hephaestus splicing factor family [Desmodus
rotundus]
Length = 542
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 71/120 (59%), Gaps = 7/120 (5%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 224
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS-----QPSILGQQP 250
L G IY G C L I Y+R T L++ N++ S DYT P + + +ILG+ P
Sbjct: 225 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHP 283
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 188 VCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKI 239
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 240 EYARPTRLNVIRNDNDSWDYTKPYL 264
>gi|26330256|dbj|BAC28858.1| unnamed protein product [Mus musculus]
Length = 326
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 215 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 273
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 234
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 274 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 311
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F++ G QA+V+F A AK AL+G I G CTL+I Y+
Sbjct: 242 GKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKIEYARP 293
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + S DYT PYL
Sbjct: 294 TRLNVIRNDNDSWDYTKPYL 313
>gi|74194841|dbj|BAE26011.1| unnamed protein product [Mus musculus]
Length = 592
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 14/154 (9%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 129 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 188
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 226
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 189 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 246
Query: 227 RSRDYTLPS-----TPMVN-----SQPSILGQQP 250
+ DYT P+ P N QP +LG P
Sbjct: 247 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHP 280
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 185 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 236
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 237 TRLNVFKNDQDTWDYTNPNL 256
>gi|348538507|ref|XP_003456732.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Oreochromis
niloticus]
Length = 556
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T DVL+ V + G V +I +F +N G+QA++++ VQ A AK A
Sbjct: 177 NKVLLLSIQNPLYPITTDVLYTVCNPIGSVLRIVIFKRN-GIQAMVEFESVQCAQKAKAA 235
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 234
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 236 LNGADIY-AGCCTLKIEYARPTRLNVIKNDNESWDYTKP 273
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F + A AK AL+G I G CTL+I
Sbjct: 199 VCNPIGSVLRIVIFKRN-GIQAMVEFESVQCAQKAKAALNGADI-------YAGCCTLKI 250
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 251 EYARPTRLNVIKNDNESWDYTKPYL 275
>gi|47087069|ref|NP_998548.1| heterogeneous nuclear ribonucleoprotein L2 [Danio rerio]
gi|32451940|gb|AAH54655.1| Heterogeneous nuclear ribonucleoprotein L [Danio rerio]
gi|182891832|gb|AAI65353.1| Hnrnpl protein [Danio rerio]
Length = 481
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+NVLL +I N Y +T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK +
Sbjct: 132 NNVLLLTIMNPIYPITSDVLYTICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKAS 190
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
L G IY G C L I Y++ T L++ N+ + DYT PS
Sbjct: 191 LNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPS 229
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 159 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-------GCCTLKIEYAKP 210
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 211 TRLNVFKNDQDTWDYTNPSL 230
>gi|417398360|gb|JAA46213.1| Putative heteroproteinous nuclear ribonucleoprotein l [Desmodus
rotundus]
Length = 285
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 224
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 234
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 225 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 262
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 188 VCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKI 239
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 240 EYARPTRLNVIRNDNDSWDYTKPYL 264
>gi|253723235|pdb|2E5I|A Chain A, Solution Structure Of Rna Binding Domain 2 In
Heterogeneous Nuclear Ribonucleoprotein L-Like
Length = 124
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 23 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 81
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 234
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 82 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 119
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 45 VCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADIY-------AGCCTLKI 96
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 97 EYARPTRLNVIRNDNDSWDYTKPYL 121
>gi|449274548|gb|EMC83649.1| Heterogeneous nuclear ribonucleoprotein L-like protein, partial
[Columba livia]
Length = 471
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 98/194 (50%), Gaps = 24/194 (12%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA+++YP A AK A
Sbjct: 97 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEYP--FCAQKAKAA 153
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 154 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 209
Query: 256 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 305
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 210 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 262
Query: 306 GSMPMGPGMMQMHM 319
GS+ M G+ Q+ M
Sbjct: 263 GSVVMVSGLHQLKM 276
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V++ A AK AL+G I G CTL+I
Sbjct: 119 VCNPVGKVQRIVIFKRN-GIQAMVEYP--FCAQKAKAALNGADI-------YAGCCTLKI 168
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 169 EYARPTRLNVIRNDNDSWDYTKPYL 193
>gi|348522989|ref|XP_003449006.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Oreochromis niloticus]
Length = 492
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 85/162 (52%), Gaps = 19/162 (11%)
Query: 76 ENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 135
E+M + +TY+A + Y+ P+ I+ S + G +
Sbjct: 81 EDMNGSSTAVTYAADNQV---------------YIAGHPAFINYSTSQKISRPGDSDDSR 125
Query: 136 S--NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 193
+ NVLL +I N Y +T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK
Sbjct: 126 TVNNVLLFTIMNPIYPITTDVLYTICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAK 184
Query: 194 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
+L G IY G C L I Y++ T L++ N+ + DYT P+
Sbjct: 185 ASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPN 225
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 155 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-------GCCTLKIEYAKP 206
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 207 TRLNVFKNDQDTWDYTNPNL 226
>gi|302821012|ref|XP_002992171.1| hypothetical protein SELMODRAFT_44533 [Selaginella moellendorffii]
gi|300140097|gb|EFJ06826.1| hypothetical protein SELMODRAFT_44533 [Selaginella moellendorffii]
Length = 414
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 133 EPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVV 191
E S +LL ++ + VT+D LH F +FGP++KIA+F ++ L QALIQY + A
Sbjct: 88 ETCSAILLVTMLDSVCHVTVDALHQTFKSFGPIEKIAIFPQSTVLAQALIQYASPRDARE 147
Query: 192 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 247
AK L I +G C + I YSR ++ + NND SRD+T S P PSILG
Sbjct: 148 AKHRLHKSKILNGS-CTMEIQYSRTDEVRVACNNDLSRDFTNSSLPSARF-PSILG 201
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 96/214 (44%), Gaps = 37/214 (17%)
Query: 27 FSAFGFVHKITTF-EKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
F +FG + KI F + T QAL+Q++ A AK+ L I G CT+ I
Sbjct: 114 FKSFGPIEKIAIFPQSTVLAQALIQYASPRDAREAKHRLHKSKILN-------GSCTMEI 166
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVA--PSAIDASGQLSVGLDGKKLE---------- 133
YS ++ V + SRD+TN LP A PS + A G + + G +
Sbjct: 167 QYSRTDEVRVACNNDLSRDFTNSSLPSARFPSILGA-GNVHLMKPGVRCRYRPGNSGLLP 225
Query: 134 --PESN---VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQ---ALIQYPD 185
P +N VLL S N + + L+ +FS +G V +I K ++ AL+Q D
Sbjct: 226 SGPTTNQRCVLLLSNLNTRM-INEHKLYNLFSVYGNVLRI----KGSFVKPELALVQMSD 280
Query: 186 VQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDL 219
A +A L+G ++ K+ I+ S H+ L
Sbjct: 281 GFQADLAMACLKGVSLFGK---KMEITLSDHSCL 311
>gi|25988650|gb|AAN76190.1| BLOCK24 variant [Homo sapiens]
Length = 262
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 161 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 219
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 234
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 220 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 257
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 183 VCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKI 234
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 235 EYARPTRLNVIRNDNDSWDYTKPYL 259
>gi|195584911|ref|XP_002082247.1| GD25314 [Drosophila simulans]
gi|194194256|gb|EDX07832.1| GD25314 [Drosophila simulans]
Length = 388
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 87/165 (52%), Gaps = 19/165 (11%)
Query: 128 DGKKLEPES----NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 183
D ++ PE+ ++LL +I N Y +T+DVLH + GPV +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGPVLRIVIFKKN-GVQAMVEF 126
Query: 184 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNSQ 242
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + + S
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTGKSLFSI 185
Query: 243 PS---ILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGW 284
P +L QP P++G GA F PP P H T W
Sbjct: 186 PENVVMLESQP-PLLGP------GAAF--PPFGAPEYHTTTPENW 221
>gi|386768309|ref|NP_001246425.1| smooth, isoform L [Drosophila melanogaster]
gi|383302597|gb|AFH08178.1| smooth, isoform L [Drosophila melanogaster]
Length = 492
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 86/165 (52%), Gaps = 18/165 (10%)
Query: 128 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 183
D ++ PE+ +LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 184 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNSQ 242
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + + +
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTVKEIGNG 185
Query: 243 PSILGQQPV---PMVGATANQYNGAQFAPPPPEQPMMHQPTAAGW 284
S L Q+P+ P++G GA F PP P H T W
Sbjct: 186 RSPLLQEPLYEPPLLGP------GAAF--PPFGAPEYHTTTPENW 222
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 107 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 158
Query: 91 TDLSV-KFQSHRSRDYT 106
L+V K + S DYT
Sbjct: 159 EKLNVYKNEPDTSWDYT 175
>gi|213510846|ref|NP_001133491.1| Heterogeneous nuclear ribonucleoprotein L-like [Salmo salar]
gi|209154218|gb|ACI33341.1| Heterogeneous nuclear ribonucleoprotein L-like [Salmo salar]
Length = 548
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 75/140 (53%), Gaps = 2/140 (1%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T DVL+ V + G V +I +F +N G+QA++++ ++ A AK A
Sbjct: 171 NKVLLLSIQNPLYPITTDVLYTVCNPIGSVMRIVIFKRN-GIQAMVEFESIECAQKAKAA 229
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P + G+Q ++G
Sbjct: 230 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNESWDYTKPYLVRRDVSERGKGRQRQAILG 288
Query: 256 ATANQYNGAQFAPPPPEQPM 275
+ Y + P P+
Sbjct: 289 EHPSSYGDNGYGSHCPLLPL 308
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F E A AK AL+G I G CTL+I
Sbjct: 193 VCNPIGSVMRIVIFKRN-GIQAMVEFESIECAQKAKAALNGADI-------YAGCCTLKI 244
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 245 EYARPTRLNVIRNDNESWDYTKPYL 269
>gi|410035018|ref|XP_003949838.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Pan
troglodytes]
Length = 513
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 93/185 (50%), Gaps = 28/185 (15%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 161 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 219
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P S +L P+P
Sbjct: 220 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYLGRRGSHGPLL---PLP--- 272
Query: 256 ATANQYN-GAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMGPGM 314
++Y G++ P P+ P AS S GN P GS+ M G+
Sbjct: 273 ---SRYRMGSRDTPELVAYPL------------PQASSSYMHGGN----PSGSVVMVSGL 313
Query: 315 MQMHM 319
Q+ M
Sbjct: 314 HQLKM 318
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA++ F A AK AL+G I G CTL+I
Sbjct: 183 VCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------YAGCCTLKI 234
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 235 EYARPTRLNVIRNDNDSWDYTKPYL 259
>gi|345311818|ref|XP_003429156.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L
[Ornithorhynchus anatinus]
Length = 693
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
++VLL +I N Y++T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK +
Sbjct: 106 NSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKAS 164
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
L G IY G C L I Y++ T L++ N+ + DYT P+
Sbjct: 165 LNGADIYS-GCCTLKIEYAKPTRLNVFKNDQDTWDYTNPN 203
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 133 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 184
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 185 TRLNVFKNDQDTWDYTNPNL 204
>gi|31416927|gb|AAH08217.2| HNRPLL protein [Homo sapiens]
Length = 275
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 161 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 219
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 234
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 220 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 257
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F++ G QA+V+F A AK AL+G I G CTL+I Y+
Sbjct: 188 GKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKIEYARP 239
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + S DYT PYL
Sbjct: 240 TRLNVIRNDNDSWDYTKPYL 259
>gi|221126625|ref|XP_002156158.1| PREDICTED: polypyrimidine tract-binding protein 3-like [Hydra
magnipapillata]
Length = 494
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL + N+ Y VT+DVL VF G +QK+ F +N ALIQY + + A AK +
Sbjct: 135 VLKVIVTNIIYPVTIDVLQQVFQRCGEIQKVVTFIRNDQFHALIQYSNSKEASAAKVLFD 194
Query: 198 GHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLP 234
IY+G C LH+ +S+ ++L +K NN++ RD+T P
Sbjct: 195 KQNIYNG--CNTLHVEFSKMSELVVKFNNEKMRDFTKP 230
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 111/250 (44%), Gaps = 55/250 (22%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
VF G + K+ TF + F AL+Q+S+++ AS+AK D ++I G TL
Sbjct: 154 QVFQRCGEIQKVVTFIRNDQFHALIQYSNSKEASAAKVLFDKQNIYN-------GCNTLH 206
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNP------YLPVAPSAIDAS---GQLSV---------- 125
+ +S ++L VKF + + RD+T P L V A+ A G L V
Sbjct: 207 VEFSKMSELVVKFNNEKMRDFTKPDKSNYDNLNVQLQAMQAQMNPGMLPVPSSFPPQLFT 266
Query: 126 -GLDG--------KKLEPESN-------------VLLASIENMQYAVTLDVLHMVFSAFG 163
G + L P +N VLL S N + ++ D L ++F +G
Sbjct: 267 QGFNFGGGFPNMMGSLSPNNNFNQNIGGGNRQVSVLLVSNLN-ENEISCDDLFILFGHYG 325
Query: 164 PVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIK 222
V ++ +F+K ALIQ+ D Q A A + L ++ ++ +S S+H + +
Sbjct: 326 DVLRVKILFNKKDT--ALIQFADAQQASTALQNLNNVTLFGN---EMRVSRSKHDYVHMP 380
Query: 223 VNNDRSRDYT 232
++D ++ T
Sbjct: 381 KSDDEGKELT 390
>gi|440910313|gb|ELR60121.1| Heterogeneous nuclear ribonucleoprotein L, partial [Bos grunniens
mutus]
Length = 512
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 92/179 (51%), Gaps = 18/179 (10%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 85 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 144
Query: 167 KIAMFDKNGGLQALIQYPDV-QTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN 225
+I +F KN G+QA+++YP + A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 145 RIVIFRKN-GVQAMVEYPLLGNGAQRAKASLNGADIYS-GCCTLKIEYAKPTRLNVFKND 202
Query: 226 DRSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 203 QDTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 261
>gi|74222755|dbj|BAE42243.1| unnamed protein product [Mus musculus]
Length = 172
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 61 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 119
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 234
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 120 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 157
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F++ G QA+V+F A AK AL+G I G CTL+I Y+
Sbjct: 88 GKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADIY-------AGCCTLKIEYARP 139
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + S DYT PYL
Sbjct: 140 TRLNVIRNDNDSWDYTKPYL 159
>gi|52545658|emb|CAH56358.1| hypothetical protein [Homo sapiens]
Length = 216
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 100 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 158
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 234
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 159 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 196
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 122 VCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKI 173
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 174 EYARPTRLNVIRNDNDSWDYTKPYL 198
>gi|302791034|ref|XP_002977284.1| hypothetical protein SELMODRAFT_54589 [Selaginella moellendorffii]
gi|300155260|gb|EFJ21893.1| hypothetical protein SELMODRAFT_54589 [Selaginella moellendorffii]
Length = 414
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 133 EPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVV 191
E S +LL ++ + VT+D LH F +FGP++KIA+F ++ L QALIQY + A
Sbjct: 88 ETCSPILLVTMLDSVCHVTVDALHQTFKSFGPIEKIAIFPQSTVLAQALIQYASPRDARE 147
Query: 192 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 247
AK L I +G C + I YSR ++ + NND SRD+T S P PSILG
Sbjct: 148 AKHRLHKSKILNGS-CTMEIQYSRTDEVRVACNNDLSRDFTNSSLPSARF-PSILG 201
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 95/220 (43%), Gaps = 49/220 (22%)
Query: 27 FSAFGFVHKITTF-EKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
F +FG + KI F + T QAL+Q++ A AK+ L I G CT+ I
Sbjct: 114 FKSFGPIEKIAIFPQSTVLAQALIQYASPRDAREAKHRLHKSKILN-------GSCTMEI 166
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVA--PSAIDA------------------SGQLSV 125
YS ++ V + SRD+TN LP A PS + A SG L
Sbjct: 167 QYSRTDEVRVACNNDLSRDFTNSSLPSARFPSILGAGNAHLMKPGVRCRYRPGNSGLLPS 226
Query: 126 GLDGKKLEPESN---VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQ---A 179
G P +N VLL S N + + L+ +FS +G V +I K ++ A
Sbjct: 227 G-------PTTNQRCVLLLSNLNTRM-INEHKLYNLFSVYGNVLRI----KGSFVKPELA 274
Query: 180 LIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDL 219
L+Q D A +A L+G ++ K+ I+ S H+ L
Sbjct: 275 LVQMSDGFQADLAMACLKGVSLFGK---KMEITLSDHSCL 311
>gi|221058202|ref|XP_002261609.1| polypyrimidine tract binding protein [Plasmodium knowlesi strain H]
gi|194247614|emb|CAQ41014.1| polypyrimidine tract binding protein, putative [Plasmodium knowlesi
strain H]
Length = 663
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 73/132 (55%), Gaps = 8/132 (6%)
Query: 114 PSAIDA--SGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMF 171
PS DA G + G K S V+L S+ N+ Y V +D+++ +FS GPV+KI F
Sbjct: 294 PSTKDALEGGNIKKGKHNKN--ESSRVILVSVLNLHYPVDIDLIYYLFSKCGPVEKIIAF 351
Query: 172 DKNGGL-QALIQYPDVQTAVVAKEALEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSR 229
+N + QAL+Q+ +++TA A + L IYDG C + I YS +L++K NN SR
Sbjct: 352 SRNPLIYQALVQFQNIETAQEAIKTLHNRNIYDG--CNTIQIQYSFLKELNVKANNSSSR 409
Query: 230 DYTLPSTPMVNS 241
DYT N+
Sbjct: 410 DYTTTDVSKNNN 421
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 100/227 (44%), Gaps = 48/227 (21%)
Query: 25 HVFSAFGFVHKITTFEKT-AGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTL 83
++FS G V KI F + +QALVQF + ETA A L R+I G T+
Sbjct: 337 YLFSKCGPVEKIIAFSRNPLIYQALVQFQNIETAQEAIKTLHNRNIYD-------GCNTI 389
Query: 84 RITYSAHTDLSVKFQSHRSRDYT--------NP--------YLPVAPSAIDASGQLSVGL 127
+I YS +L+VK + SRDYT NP LP P+ +L + L
Sbjct: 390 QIQYSFLKELNVKANNSSSRDYTTTDVSKNNNPVNIQTSHGVLP-TPTQKGNDSELYLIL 448
Query: 128 DGK--------KLEPESNVLLASIENMQYAVTLDV-----LHMVFSAFGPVQKIAMFDKN 174
+ K K ++ VL+ Y + D L +FS +G V +I + +
Sbjct: 449 ERKFKLVDFDAKNASKTPVLIC------YNIAKDYTDVHKLFNLFSVYGFVSRIKILREK 502
Query: 175 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
ALIQY A VA+E L+ H DG L I++S+ D+ I
Sbjct: 503 PDC-ALIQYAGHLFASVAQECLQ-HSKIDGQV--LEINFSKILDIRI 545
>gi|402890610|ref|XP_003908576.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 3
[Papio anubis]
Length = 413
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 93/185 (50%), Gaps = 28/185 (15%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 61 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 119
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DYT P S +L P+P
Sbjct: 120 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYLGRRGSHGPLL---PLP--- 172
Query: 256 ATANQYN-GAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMGPGM 314
++Y G++ P P+ P AS S GN P GS+ M G+
Sbjct: 173 ---SRYRMGSRDTPELVAYPL------------PQASSSYMHGGN----PSGSVVMVSGL 213
Query: 315 MQMHM 319
Q+ M
Sbjct: 214 HQLKM 218
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA++ F A AK AL+G I G CTL+I
Sbjct: 83 VCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------YAGCCTLKI 134
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 135 EYARPTRLNVIRNDNDSWDYTKPYL 159
>gi|340708741|ref|XP_003392980.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Bombus
terrestris]
Length = 479
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
++VLL +I N Y +T++VLH + + G VQ+I +F KN G+QA++++ V++A AKE
Sbjct: 43 NHVLLFTIINPVYPITVEVLHAISAPSGQVQRIVIFKKN-GVQAMVEFDTVESATRAKET 101
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
L G IY G C L I +++ T L++ N+ S DYT P+
Sbjct: 102 LHGADIYS-GCCTLKIDFAKPTKLNVYKNDAESWDYTTPT 140
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 50/102 (49%), Gaps = 9/102 (8%)
Query: 22 ERAHVFSA-FGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGP 80
E H SA G V +I F+K G QA+V+F E+A+ AK L G I G
Sbjct: 60 EVLHAISAPSGQVQRIVIFKKN-GVQAMVEFDTVESATRAKETLHGADI-------YSGC 111
Query: 81 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQ 122
CTL+I ++ T L+V S DYT P L + DA+G
Sbjct: 112 CTLKIDFAKPTKLNVYKNDAESWDYTTPTLGSSAHKNDATGN 153
>gi|350413134|ref|XP_003489890.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Bombus
impatiens]
Length = 479
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
++VLL +I N Y +T++VLH + + G VQ+I +F KN G+QA++++ V++A AKE
Sbjct: 43 NHVLLFTIINPVYPITVEVLHAISAPSGQVQRIVIFKKN-GVQAMVEFDTVESATRAKET 101
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
L G IY G C L I +++ T L++ N+ S DYT P+
Sbjct: 102 LHGADIYS-GCCTLKIDFAKPTKLNVYKNDAESWDYTTPT 140
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 50/102 (49%), Gaps = 9/102 (8%)
Query: 22 ERAHVFSA-FGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGP 80
E H SA G V +I F+K G QA+V+F E+A+ AK L G I G
Sbjct: 60 EVLHAISAPSGQVQRIVIFKKN-GVQAMVEFDTVESATRAKETLHGADI-------YSGC 111
Query: 81 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQ 122
CTL+I ++ T L+V S DYT P L + DA+G
Sbjct: 112 CTLKIDFAKPTKLNVYKNDAESWDYTTPTLGSSAHKNDATGN 153
>gi|340375987|ref|XP_003386515.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Amphimedon queenslandica]
Length = 449
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 134 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 193
PE+++LL +I N Y +T+DV+ + + +G VQ+I +F KN GLQ L+++ +A AK
Sbjct: 145 PENHILLFTIFNPLYPITVDVIRTICTPYGFVQRIVIFRKN-GLQVLVEFDSNHSAQRAK 203
Query: 194 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPM 253
+ L+G IY G C L I ++R L++ N+D + DYT+ + ++ P + P+
Sbjct: 204 QQLDGADIY-AGCCTLKIEFARTNKLNVFKNDDMTCDYTVQGQRLQSNFPRV---PPMQQ 259
Query: 254 VGATANQYNGAQFAPPPPEQ-PMMHQPTAAGWGAV 287
++ + +AP P P + AG G+V
Sbjct: 260 QQQQMRPFSTSPYAPQPTNSAPFVGTQAVAGSGSV 294
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+ + +GFV +I F K G Q LV+F +A AK LDG I G CTL+I
Sbjct: 169 ICTPYGFVQRIVIFRKN-GLQVLVEFDSNHSAQRAKQQLDGADI-------YAGCCTLKI 220
Query: 86 TYSAHTDLSVKFQSHRSRDYT 106
++ L+V + DYT
Sbjct: 221 EFARTNKLNVFKNDDMTCDYT 241
>gi|4929470|gb|AAD34009.1|AF148690_1 RNA-binding protein XlhnRNPL [Xenopus laevis]
Length = 273
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 79/133 (59%), Gaps = 10/133 (7%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+NVLL +I N Y++T DVL+ + + GPV++I +F KN G+QA++++ VQ+A AK +
Sbjct: 142 NNVLLLTILNPIYSITTDVLYTICNPCGPVERIVIFRKN-GVQAMVEFDSVQSAQRAKAS 200
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG-----QQP 250
L G IY G C L I Y++ + L++ N+ + DYT P ++ Q + G Q+
Sbjct: 201 LNGADIY-SGCCTLKIEYAKPSRLNVFKNDQDTWDYT---NPCLSGQGDLGGNPNKRQRN 256
Query: 251 VPMVGATANQYNG 263
P++G +Y G
Sbjct: 257 PPLLGDHPAEYGG 269
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 169 GPVERIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 220
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
+ L+V + DYTNP L
Sbjct: 221 SRLNVFKNDQDTWDYTNPCL 240
>gi|188528957|ref|NP_001120904.1| heterogeneous nuclear ribonucleoprotein L-like [Xenopus (Silurana)
tropicalis]
gi|183986223|gb|AAI66362.1| hnrpll protein [Xenopus (Silurana) tropicalis]
Length = 531
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 97/189 (51%), Gaps = 12/189 (6%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G V++I +F +N G+QA++++ V +A AK +
Sbjct: 155 NKVLLLSIQNPLYPITVDVLYSVCNPVGKVERIVIFKRN-GIQAMVEFDSVHSAQKAKSS 213
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y+R T L++ N++ S DY S P ++ + G+Q ++G
Sbjct: 214 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDY---SKPYLSRRDRGKGRQRQAILG 269
Query: 256 A--TANQYNG-AQFAP--PPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPM 310
++ +Y+G P P P M A P S M P P GS+ M
Sbjct: 270 DHPSSYRYDGYGNHGPLLPLPNLYRMGSRDTPELVAYPLPQASSSYMHGGP--PVGSVAM 327
Query: 311 GPGMMQMHM 319
G+ Q M
Sbjct: 328 VSGLHQQKM 336
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F +A AK++L+G I G CTL+I
Sbjct: 177 VCNPVGKVERIVIFKRN-GIQAMVEFDSVHSAQKAKSSLNGADI-------YAGCCTLKI 228
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DY+ PYL
Sbjct: 229 EYARPTRLNVIRNDNDSWDYSKPYL 253
>gi|290993108|ref|XP_002679175.1| predicted protein [Naegleria gruberi]
gi|284092791|gb|EFC46431.1| predicted protein [Naegleria gruberi]
Length = 482
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 46 QALVQFSDTETASSAKNALDGR-SIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRD 104
Q LVQF++ + A S + + P +++ + + YS+HT+LS S
Sbjct: 57 QGLVQFAEVDGAISLIESFNNNPDSPSFVIRD----TKVYPNYSSHTELSKGLISKSDNG 112
Query: 105 YTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 164
N +GK+ +P +L+ ++ V +D LH +FS G
Sbjct: 113 LAN--------------------NGKQQDPNHILLVTISKSKSTDVNIDSLHEIFSLKGS 152
Query: 165 --VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIK 222
++KI MF+K GLQALIQY +V A+ A++ L+G + L I +S DL++
Sbjct: 153 CSIEKIVMFNKTAGLQALIQYKNVNDALEARKKLQGETPFSTS-ENLLIQFSNLKDLTVH 211
Query: 223 VNNDRSRDYTLP 234
N+D++RDYT P
Sbjct: 212 QNSDKARDYTKP 223
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 29/215 (13%)
Query: 33 VHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTD 92
+ KI F KTAG QAL+Q+ + A A+ L G + P + EN L I +S D
Sbjct: 155 IEKIVMFNKTAGLQALIQYKNVNDALEARKKLQGET-P-FSTSEN-----LLIQFSNLKD 207
Query: 93 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQ------------LSVGLDGKKLEPES---N 137
L+V S ++RDYT P P P + +S +S L P +
Sbjct: 208 LTVHQNSDKARDYTKP--PQQPQSSVSSPTTTNTTNSTNTVAVSSTLPSTNNAPTTVMKR 265
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
+LL S N + D+L +FS +G + +I +F K AL+Q + A+ A +L+
Sbjct: 266 ILLVSNFN-DKKMNCDLLFNLFSCYGYIHRIKIF-KTKPDHALVQMASHKQALNAISSLK 323
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 232
G I+ L +++S+HT ++ +++ +D+T
Sbjct: 324 GVQIFGKT---LSVNFSKHTFINTNKSDNNMKDFT 355
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 20/187 (10%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
++FS +G++H+I F KT ALVQ + + A +A ++L G I G TL
Sbjct: 284 NLFSCYGYIHRIKIF-KTKPDHALVQMASHKQALNAISSLKGVQI--------FGK-TLS 333
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDAS-------GQLSVGLDGKKL---EP 134
+ +S HT ++ + +D+T L P S L+ G KL +P
Sbjct: 334 VNFSKHTFINTNKSDNNMKDFTKTNLNRFPRGASTSQTSPSSNNSLTNGKQHNKLYMCQP 393
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+ ++++ + ++L +FS FG ++ + +F N ALI++ + +A A
Sbjct: 394 THTLHISNVPFEKDEKGKEILTNIFSQFGEIEGLRVFRHNDKPMALIKFKTITSAAEALA 453
Query: 195 ALEGHCI 201
L I
Sbjct: 454 TLHNETI 460
>gi|390341476|ref|XP_785931.3| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Strongylocentrotus purpuratus]
Length = 570
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Query: 114 PSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDK 173
P+ D S + G+ +NVLL ++ +Y +T DV+H + FG V +I +F K
Sbjct: 132 PAFFDYSNSARIIRPGENDSEANNVLLMTVVRPKYRITTDVIHTICKGFGNVLRIVIFKK 191
Query: 174 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 233
N G+QA++++ VQ+A AK+ L IY G C L I ++R L++ N+ + DYT
Sbjct: 192 N-GVQAMVEFDTVQSATHAKQNLHNCDIY-SGCCTLKIDFARPKTLTVYKNDGETYDYTN 249
Query: 234 PSTPMVNSQPSILGQQPVP 252
P ++L P P
Sbjct: 250 PGLNAAAQGRALLDDPPEP 268
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+ FG V +I F+K G QA+V+F ++A+ AK L I G CTL+I
Sbjct: 176 ICKGFGNVLRIVIFKKN-GVQAMVEFDTVQSATHAKQNLHNCDIYS-------GCCTLKI 227
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVA 113
++ L+V + DYTNP L A
Sbjct: 228 DFARPKTLTVYKNDGETYDYTNPGLNAA 255
>gi|339254278|ref|XP_003372362.1| hypothetical protein Tsp_10607 [Trichinella spiralis]
gi|316967236|gb|EFV51693.1| hypothetical protein Tsp_10607 [Trichinella spiralis]
Length = 235
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 55/93 (59%), Gaps = 8/93 (8%)
Query: 19 ASGERAHVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENM 78
A ER VF FG V +I F K FQAL+QF D +A +AK ALDG+ P
Sbjct: 10 ARCER-QVFVTFGTVLRIIIFHKNNNFQALIQFLDPISAYAAKMALDGK-------PLIN 61
Query: 79 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 111
G CTL+I +S L+VK+ + +SRD+TNP LP
Sbjct: 62 GCCTLKIEFSKLATLNVKYNNEKSRDFTNPNLP 94
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 158 VFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHT 217
VF FG V +I +F KN QALIQ+ D +A AK AL+G + +G C L I +S+
Sbjct: 16 VFVTFGTVLRIIIFHKNNNFQALIQFLDPISAYAAKMALDGKPLINGC-CTLKIEFSKLA 74
Query: 218 DLSIKVNNDRSRDYTLPSTP 237
L++K NN++SRD+T P+ P
Sbjct: 75 TLNVKYNNEKSRDFTNPNLP 94
>gi|328875343|gb|EGG23708.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 404
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
SN+LL SI + ++ L+ + S +G V +I +F K G LQA +++ +A VAKEA
Sbjct: 49 SNILLCSILTPIFPISTSTLYTIMSPYGRVLRIVIFQKKG-LQAFVEFESPYSAWVAKEA 107
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 232
L G IY G C L I Y+R L++K N+D++ DYT
Sbjct: 108 LNGQDIYTGS-CTLQIDYARVATLNVKQNDDKTYDYT 143
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 107/249 (42%), Gaps = 60/249 (24%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+ S +G V +I F+K G QA V+F +A AK AL+G+ I G CTL+I
Sbjct: 71 IMSPYGRVLRIVIFQK-KGLQAFVEFESPYSAWVAKEALNGQDI-------YTGSCTLQI 122
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPY----LP------------VAPSAIDAS--------- 120
Y+ L+VK ++ DYT+ + LP V P+ +D +
Sbjct: 123 DYARVATLNVKQNDDKTYDYTSEHPGFSLPSYSPFPQPGAPGVHPAQLDPTYAKPAGPYM 182
Query: 121 ---------------GQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 165
G S +EP S ++ + + +VT D L +F +G V
Sbjct: 183 MMGQQAATTMGIPPYGMYSAAPGAMGIEPPSQTVIM-VHRLADSVTSDQLFNLFCLYGNV 241
Query: 166 QKIAMFD--KNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKV 223
KI M K+G A++Q D A A L G I+ +L + +S+H +S
Sbjct: 242 IKIKMLQGAKSG---AMVQMGDGIQADTAIHCLNGASIFGQ---RLSVFHSKHPAIS--- 292
Query: 224 NNDRSRDYT 232
+D+++D+T
Sbjct: 293 ESDKTKDFT 301
>gi|354488933|ref|XP_003506620.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Cricetulus
griseus]
Length = 576
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 96/197 (48%), Gaps = 21/197 (10%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYP-------DVQT 188
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA+++YP V
Sbjct: 193 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEYPLFSFRFESVLC 251
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK AL G IY G C L I Y+R T L++ N++ S DYT P + + G+
Sbjct: 252 AQKAKAALNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGR 307
Query: 249 QPVPMVGATANQYNGAQFAP-----PPPEQPMMHQPTAAGWGAVP-PASQSMPMMGNHPY 302
Q ++G + + + P P + M A P P + S M G
Sbjct: 308 QRQAILGDHPSSFRHDGYGSHGPLLPLPSRYRMGSRDTPELVAYPLPQASSSYMHGGS-- 365
Query: 303 MPPGSMPMGPGMMQMHM 319
P GS+ M G+ Q+ M
Sbjct: 366 -PSGSVVMVSGLHQLKM 381
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 15/87 (17%)
Query: 31 GFVHKITTFEKTAGFQALVQ-------FSDTETASSAKNALDGRSIPRYLLPENMGPCTL 83
G V +I F++ G QA+V+ F A AK AL+G I G CTL
Sbjct: 220 GKVQRIVIFKRN-GIQAMVEYPLFSFRFESVLCAQKAKAALNGADI-------YAGCCTL 271
Query: 84 RITYSAHTDLSVKFQSHRSRDYTNPYL 110
+I Y+ T L+V + S DYT PYL
Sbjct: 272 KIEYARPTRLNVIRNDNDSWDYTKPYL 298
>gi|26351857|dbj|BAC39565.1| unnamed protein product [Mus musculus]
Length = 329
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
++VLL +I N Y++T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK +
Sbjct: 158 NSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKAS 216
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
L G IY G C L I Y++ T L++ N+ + DYT P+
Sbjct: 217 LNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPN 255
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 185 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-------GCCTLKIEYAKP 236
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 237 TRLNVFKNDQDTWDYTNPNL 256
>gi|354483412|ref|XP_003503887.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Cricetulus
griseus]
Length = 498
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
++VLL +I N Y++T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK +
Sbjct: 147 NSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKAS 205
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
L G IY G C L I Y++ T L++ N+ + DYT P+
Sbjct: 206 LNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPN 244
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 174 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-------GCCTLKIEYAKP 225
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 226 TRLNVFKNDQDTWDYTNPNL 245
>gi|302820932|ref|XP_002992131.1| hypothetical protein SELMODRAFT_430388 [Selaginella moellendorffii]
gi|300140057|gb|EFJ06786.1| hypothetical protein SELMODRAFT_430388 [Selaginella moellendorffii]
Length = 695
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 3/122 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
S VL ++ N Y + + VLH VF G V+KI + + G+ IQ+ V+TA K+
Sbjct: 141 SKVLAVTVTNPIYPIDVYVLHRVFCPHGSVEKITI-SRKLGICGYIQFDSVKTAAHVKDL 199
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP-MVNSQPSILGQQPVPMV 254
L I+DG CK+ I Y++ +L + N+D +RD+ S P V S PSILG PV V
Sbjct: 200 LNDRHIFDGC-CKMEIQYAKSQELGVYFNDDNNRDFKDTSIPSRVRSDPSILGAPPVESV 258
Query: 255 GA 256
A
Sbjct: 259 PA 260
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 94/226 (41%), Gaps = 37/226 (16%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
VF G V KIT K G +QF +TA+ K+ L+ R I G C +
Sbjct: 162 RVFCPHGSVEKITISRKL-GICGYIQFDSVKTAAHVKDLLNDRHIFD-------GCCKME 213
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVA----PSAIDASGQLSV-GLDGKK-------- 131
I Y+ +L V F +RD+ + +P PS + A SV L +
Sbjct: 214 IQYAKSQELGVYFNDDNNRDFKDTSIPSRVRSDPSILGAPPVESVPALTAEDAAAGAPAV 273
Query: 132 -----LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 186
+ V+ S N++ V D L +FS +G ++K+ + G Q LI+ D
Sbjct: 274 VPTPFIGRRKRVVRVSNLNVE-KVDEDKLFNLFSPYGKIRKVQVIKVTG--QGLIEMSDA 330
Query: 187 QTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 232
A +A L+G +++ + + ++N ++SRDYT
Sbjct: 331 FQAELASACLKGARVFEKELDTVVVDK--------ELNLNQSRDYT 368
>gi|194375115|dbj|BAG62670.1| unnamed protein product [Homo sapiens]
Length = 179
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
D ++VLL +I N Y++T DVL+ + + GPVQ+I +F KN G+QA++++ VQ
Sbjct: 51 DSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQ 109
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
+A AK +L G IY G C L I Y++ T L++ N+ + DYT P+
Sbjct: 110 SAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPN 156
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 86 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-------GCCTLKIEYAKP 137
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 138 TRLNVFKNDQDTWDYTNPNL 157
>gi|119620775|gb|EAX00370.1| heterogeneous nuclear ribonucleoprotein L-like, isoform CRA_c [Homo
sapiens]
Length = 175
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 61 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 119
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 234
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 120 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 157
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F++ G QA++ F A AK AL+G I G CTL+I Y+
Sbjct: 88 GKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAALNGADI-------YAGCCTLKIEYARP 139
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + S DYT PYL
Sbjct: 140 TRLNVIRNDNDSWDYTKPYL 159
>gi|355694928|gb|AER99833.1| heteroproteinous nuclear ribonucleoprotein L [Mustela putorius
furo]
Length = 249
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
++VLL +I N Y++T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK +
Sbjct: 148 NSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKAS 206
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
L G IY G C L I Y++ T L++ N+ + DYT P+
Sbjct: 207 LNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPN 245
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 175 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-------GCCTLKIEYAKP 226
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 227 TRLNVFKNDQDTWDYTNPNL 246
>gi|194391004|dbj|BAG60620.1| unnamed protein product [Homo sapiens]
Length = 240
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
D ++VLL +I N Y++T DVL+ + + GPVQ+I +F KN G+QA++++ VQ
Sbjct: 112 DSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQ 170
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
+A AK +L G IY G C L I Y++ T L++ N+ + DYT P+
Sbjct: 171 SAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPN 217
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 147 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-------GCCTLKIEYAKP 198
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 199 TRLNVFKNDQDTWDYTNPNL 218
>gi|119601315|gb|EAW80909.1| hCG41678, isoform CRA_b [Homo sapiens]
Length = 446
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S VL +EN+ Y TLDVLH +FS FG V+ I F K+ QAL+QY D +
Sbjct: 235 GMAMAGQSLVLRIIVENLFYPTTLDVLHQIFSKFGTVKTIT-FIKDNQFQALLQYTDPEN 293
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
A K +L+ Y+ L I +S+ L++K NND+SRDY + P
Sbjct: 294 AQHTKLSLDWQNTYNACH-TLCIDFSKLISLNVKYNNDKSRDYHARTCP 341
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC-TLR 84
+FS FG V K TF K FQAL+Q++D E A K +LD ++ C TL
Sbjct: 264 IFSKFGTV-KTITFIKDNQFQALLQYTDPENAQHTKLSLDWQN--------TYNACHTLC 314
Query: 85 ITYSAHTDLSVKFQSHRSRDY 105
I +S L+VK+ + +SRDY
Sbjct: 315 IDFSKLISLNVKYNNDKSRDY 335
>gi|348530603|ref|XP_003452800.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Oreochromis niloticus]
Length = 539
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T DVL+ V + G V +I +F +N G+QA++++ V+ A AK A
Sbjct: 162 NKVLLLSIQNPLYPITTDVLYTVCNPVGNVLRIVIFKRN-GIQAMVEFESVKDAQKAKLA 220
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 234
L G IY G C L I Y+R L++ NN+ S DYT P
Sbjct: 221 LNGADIY-AGCCTLKIEYARPNRLNVICNNNTSWDYTKP 258
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F++ G QA+V+F + A AK AL+G I G CTL+I Y+
Sbjct: 189 GNVLRIVIFKRN-GIQAMVEFESVKDAQKAKLALNGADI-------YAGCCTLKIEYARP 240
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
L+V ++ S DYT P+L
Sbjct: 241 NRLNVICNNNTSWDYTKPFL 260
>gi|119601314|gb|EAW80908.1| hCG41678, isoform CRA_a [Homo sapiens]
Length = 183
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 61/104 (58%), Gaps = 4/104 (3%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VL +EN+ Y TLDVLH +FS FG V+ I F K+ QAL+QY D + A K
Sbjct: 6 QSLVLRIIVENLFYPTTLDVLHQIFSKFGTVKTIT-FIKDNQFQALLQYTDPENAQHTKL 64
Query: 195 ALEGHCIYDGGFC-KLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
+L+ Y+ C L I +S+ L++K NND+SRDY + P
Sbjct: 65 SLDWQNTYNA--CHTLCIDFSKLISLNVKYNNDKSRDYHARTCP 106
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC-TLR 84
+FS FG V K TF K FQAL+Q++D E A K +LD ++ C TL
Sbjct: 29 IFSKFGTV-KTITFIKDNQFQALLQYTDPENAQHTKLSLDWQN--------TYNACHTLC 79
Query: 85 ITYSAHTDLSVKFQSHRSRDY 105
I +S L+VK+ + +SRDY
Sbjct: 80 IDFSKLISLNVKYNNDKSRDY 100
>gi|386768327|ref|NP_001246433.1| smooth, isoform Z [Drosophila melanogaster]
gi|383302606|gb|AFH08186.1| smooth, isoform Z [Drosophila melanogaster]
Length = 491
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 128 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 183
D ++ PE+ +LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 184 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNSQ 242
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + + S
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTGKSLFSI 185
Query: 243 PS---ILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGW 284
P +L QP P++G GA F PP P H T W
Sbjct: 186 PENVVMLESQP-PLLGP------GAAF--PPFGAPEYHTTTPENW 221
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 107 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 158
Query: 91 TDLSV-KFQSHRSRDYT 106
L+V K + S DYT
Sbjct: 159 EKLNVYKNEPDTSWDYT 175
>gi|386768319|ref|NP_001246429.1| smooth, isoform U [Drosophila melanogaster]
gi|383302602|gb|AFH08182.1| smooth, isoform U [Drosophila melanogaster]
Length = 515
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 88/170 (51%), Gaps = 10/170 (5%)
Query: 128 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 183
D ++ PE+ +LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 63 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 121
Query: 184 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNSQ 242
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + ++ +
Sbjct: 122 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTGEILPIK 180
Query: 243 PSILGQQPV---PMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPP 289
G+ P+ P+ G Y+ + F+ P + QP G GA P
Sbjct: 181 EIGNGRSPLLQEPLYGTRPQPYSKSLFSIPENVVMLESQPPLLGPGAAFP 230
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 102 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 153
Query: 91 TDLSV-KFQSHRSRDY---TNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENM 146
L+V K + S DY T LP+ S L L G + +P S L + EN+
Sbjct: 154 EKLNVYKNEPDTSWDYTLSTGEILPIKEIGNGRSPLLQEPLYGTRPQPYSKSLFSIPENV 213
>gi|195487089|ref|XP_002091762.1| GE13838 [Drosophila yakuba]
gi|194177863|gb|EDW91474.1| GE13838 [Drosophila yakuba]
Length = 491
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 128 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 183
D ++ PE+ +LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 184 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNSQ 242
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + + S
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTGKSLFSI 185
Query: 243 PS---ILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGW 284
P +L QP P++G GA F PP P H T W
Sbjct: 186 PENVVMLESQP-PLLGP------GAAF--PPFGAPEYHPTTPENW 221
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 107 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 158
Query: 91 TDLSV-KFQSHRSRDYT 106
L+V K + S DYT
Sbjct: 159 EKLNVYKNEPDTSWDYT 175
>gi|389584747|dbj|GAB67479.1| polypyrimidine tract binding protein [Plasmodium cynomolgi strain
B]
Length = 746
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVVAKE 194
S V+L S+ N+ Y V +++++ +FS G V+KI F +N + QAL+Q+P+++TA A +
Sbjct: 399 SRVILVSVLNLHYPVDIELIYYLFSKCGTVEKIITFSRNPLIYQALVQFPNIETAQEAIK 458
Query: 195 ALEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYT 232
L IYDG C + I YS +L +K NN SRDYT
Sbjct: 459 TLHNRNIYDG--CNTIQIQYSFLKELVVKANNSSSRDYT 495
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 95/220 (43%), Gaps = 34/220 (15%)
Query: 25 HVFSAFGFVHKITTFEKT-AGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTL 83
++FS G V KI TF + +QALVQF + ETA A L R+I G T+
Sbjct: 420 YLFSKCGTVEKIITFSRNPLIYQALVQFPNIETAQEAIKTLHNRNIYD-------GCNTI 472
Query: 84 RITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSV-------GLDGK---KLE 133
+I YS +L VK + SRDYT + + ++ V G D + LE
Sbjct: 473 QIQYSFLKELVVKANNSSSRDYTAANMTKNKNLLNFQTSHGVLPTPTRKGNDSELYLMLE 532
Query: 134 PESNVLLASIENMQYAVTL----------DV--LHMVFSAFGPVQKIAMFDKNGGLQALI 181
+ ++ +N L DV L +FS +G V +I + + ALI
Sbjct: 533 RKFKLVDFDAKNTSKTPVLICYNIPKDYTDVHKLFNLFSVYGFVSRIKILREKPD-SALI 591
Query: 182 QYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
QY A VA+E L+ + D L + +S+ D+ I
Sbjct: 592 QYAGYLFASVAQECLQHAKVGDQV---LELHFSKILDIRI 628
>gi|297713191|ref|XP_002833087.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like, partial
[Pongo abelii]
Length = 339
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 79/131 (60%), Gaps = 6/131 (4%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
++VLL +I N Y++T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK +
Sbjct: 202 NSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQWAKAS 260
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMV---NSQPSILGQQPVP 252
L G IY G C L + Y++ T L++ ++ + DYT P+ S P+ +QP P
Sbjct: 261 LNGADIY-SGCCALKMEYAKPTRLNVFKSDQDTWDYTNPNLSGQGDPGSNPNKRQRQP-P 318
Query: 253 MVGATANQYNG 263
++G +Y G
Sbjct: 319 LLGDHPAEYGG 329
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G C L++ Y+
Sbjct: 229 GPVQRIVIFRKN-GVQAMVEFDSVQSAQWAKASLNGADIYS-------GCCALKMEYAKP 280
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 281 TRLNVFKSDQDTWDYTNPNL 300
>gi|432843758|ref|XP_004065651.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Oryzias
latipes]
Length = 582
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 91/175 (52%), Gaps = 12/175 (6%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
++ VLL SI+N Y +T DVL+ V + G V +I +F +N G+QA++++ V+ A AK
Sbjct: 202 KNKVLLLSIQNPLYPITTDVLYTVCNPVGNVLRIVIFKRN-GIQAMVEFESVEDAQKAKL 260
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 254
AL G IY G C L I Y+R L++ N++ S DYT P + G+Q ++
Sbjct: 261 ALNGADIYSGC-CTLKIEYARPNRLNVVRNDNTSWDYTKPFLLHRDVVKRGKGRQRQAIL 319
Query: 255 GATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMP 309
G + G P P++ PT + + +S+ + M ++P + P + P
Sbjct: 320 GEHPSNGYG-------PHCPLLTLPTNSRYRR---SSEQVQDMISYPPLLPKTFP 364
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F E A AK AL+G I G CTL+I
Sbjct: 225 VCNPVGNVLRIVIFKRN-GIQAMVEFESVEDAQKAKLALNGADI-------YSGCCTLKI 276
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ L+V + S DYT P+L
Sbjct: 277 EYARPNRLNVVRNDNTSWDYTKPFL 301
>gi|156100793|ref|XP_001616090.1| polypyrimidine tract binding protein [Plasmodium vivax Sal-1]
gi|148804964|gb|EDL46363.1| polypyrimidine tract binding protein, putative [Plasmodium vivax]
Length = 747
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 76/126 (60%), Gaps = 9/126 (7%)
Query: 110 LPVAPSAIDASGQLSVGLDGKKLEPESN-VLLASIENMQYAVTLDVLHMVFSAFGPVQKI 168
+P A A++ + + + GK+ + ES+ V+L S+ N+ Y V +++++ +FS G V+KI
Sbjct: 377 VPSAKDALEGANKKT----GKQNKNESSRVILVSVLNLHYPVDIELIYYLFSKCGTVEKI 432
Query: 169 AMFDKNGGL-QALIQYPDVQTAVVAKEALEGHCIYDGGFCK-LHISYSRHTDLSIKVNND 226
F +N + QAL+Q+ +++TA A + L IYDG C + I YS +L +K NN
Sbjct: 433 ITFSRNPLIYQALVQFQNIETAQEAIKTLHNRNIYDG--CNTIQIQYSFLKELVVKANNS 490
Query: 227 RSRDYT 232
SRDYT
Sbjct: 491 SSRDYT 496
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 95/220 (43%), Gaps = 34/220 (15%)
Query: 25 HVFSAFGFVHKITTFEKT-AGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTL 83
++FS G V KI TF + +QALVQF + ETA A L R+I G T+
Sbjct: 421 YLFSKCGTVEKIITFSRNPLIYQALVQFQNIETAQEAIKTLHNRNIYD-------GCNTI 473
Query: 84 RITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSV-------GLDGK---KLE 133
+I YS +L VK + SRDYT L + ++ V G D + LE
Sbjct: 474 QIQYSFLKELVVKANNSSSRDYTATNLGKNKNLLNFQTSHGVLPTPTRKGNDSELYLMLE 533
Query: 134 PESNVLLASIENMQYAVTL----------DV--LHMVFSAFGPVQKIAMFDKNGGLQALI 181
+ ++ +N L DV L +FS +G V +I + + ALI
Sbjct: 534 RKFKLVDFDAKNTSKTPVLICYNIPKDYTDVHKLFNLFSVYGFVSRIKILREKPD-SALI 592
Query: 182 QYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 221
QY A VA+E L+ + D L + +S+ D+ I
Sbjct: 593 QYAGYLFASVAQECLQHAKVGDQ---VLELHFSKILDIRI 629
>gi|326430347|gb|EGD75917.1| polypyrimidine tract-binding protein 1 isoform d [Salpingoeca sp.
ATCC 50818]
Length = 496
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 13/125 (10%)
Query: 130 KKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTA 189
+ P S L+A + N+ Y+++L LH +FS G V K+ F K LQAL+Q +A
Sbjct: 113 RDTNPPSKCLIAKVTNLSYSISLQTLHSLFSRAGRVDKMVCFMKQSFLQALVQMDSEASA 172
Query: 190 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND--RSRDY---------TLPSTPM 238
+A+ L IY G C L + +S+ +++++ ++D R+RD+ TLP+TP
Sbjct: 173 ALARRMLNNQDIY-SGCCHLAVEFSKLNEVTVRQDSDPARARDFIRSPLMDGETLPNTP- 230
Query: 239 VNSQP 243
+N QP
Sbjct: 231 INLQP 235
>gi|256080365|ref|XP_002576452.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|238661720|emb|CAZ32689.1| heterogeneous nuclear ribonucleoprotein l (hnrnp l), putative
[Schistosoma mansoni]
Length = 544
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 36/210 (17%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
VF FG + I QAL++F D +A A + C+
Sbjct: 46 RVFEQFGSIRDIAMIPHKG--QALIEFDDINSAERA-----------------VARCS-- 84
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIE 144
+ +V F +HR + + V ++ Q S +L PES VL+ ++
Sbjct: 85 -------ENAVMFANHRLKVNYSTSKRVVHRPLENDNQHS------ELPPESRVLMLTVY 131
Query: 145 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 204
N QY +T+DV+H + + G V +I + K +QA++++ + + A AK L G IY
Sbjct: 132 NAQYPITVDVIHQITAKHGRVLRIVILRKT-RIQAMVEFKNTEEARTAKRHLNGADIY-S 189
Query: 205 GFCKLHISYSRHTDLSIKVNNDRSRDYTLP 234
G C L + ++R T L++ N+ S D+ P
Sbjct: 190 GCCTLKVEFARPTRLTVTRNDQDSWDFENP 219
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+ + G V +I KT QA+V+F +TE A +AK L+G I G CTL+
Sbjct: 144 QITAKHGRVLRIVILRKTR-IQAMVEFKNTEEARTAKRHLNGADI-------YSGCCTLK 195
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGK 130
+ ++ T L+V S D+ NP L ++ S ++ G+ + L G+
Sbjct: 196 VEFARPTRLTVTRNDQDSWDFENPLL-LSTSLNESDGRGDISLLGR 240
>gi|386768317|ref|NP_001246428.1| smooth, isoform T [Drosophila melanogaster]
gi|383302601|gb|AFH08181.1| smooth, isoform T [Drosophila melanogaster]
Length = 552
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 73/129 (56%), Gaps = 7/129 (5%)
Query: 128 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 183
D ++ PE+ +LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 184 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNSQ 242
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + + +
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTVKEIGNG 185
Query: 243 PSILGQQPV 251
S L Q+P+
Sbjct: 186 RSPLLQEPL 194
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 107 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 158
Query: 91 TDLSV-KFQSHRSRDYT 106
L+V K + S DYT
Sbjct: 159 EKLNVYKNEPDTSWDYT 175
>gi|281363805|ref|NP_001027439.2| smooth, isoform H [Drosophila melanogaster]
gi|40882465|gb|AAR96144.1| RE74969p [Drosophila melanogaster]
gi|272432576|gb|AAZ52803.2| smooth, isoform H [Drosophila melanogaster]
Length = 480
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 81/162 (50%), Gaps = 24/162 (14%)
Query: 128 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 183
D ++ PE+ +LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 184 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNSQ 242
++ A A+E L G IY G C L I Y++ L++ N D S DYTL ST + +
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTL-STGEILPK 184
Query: 243 PSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGW 284
P +LG GA F PP P H T W
Sbjct: 185 PPLLGP--------------GAAF--PPFGAPEYHTTTPENW 210
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 107 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 158
Query: 91 TDLSV-KFQSHRSRDYT 106
L+V K + S DYT
Sbjct: 159 EKLNVYKNEPDTSWDYT 175
>gi|405962643|gb|EKC28300.1| Heterogeneous nuclear ribonucleoprotein L [Crassostrea gigas]
Length = 551
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 66/101 (65%), Gaps = 4/101 (3%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+++LL +I N QY VT+D++H + S +G V +I +F K+ G+Q+++++ DV++A AK+A
Sbjct: 119 NHILLFTILNPQYPVTVDIMHTICSPYGQVVRIVIFRKS-GMQSMVEFDDVESAKRAKQA 177
Query: 196 LEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLPS 235
L G IY C L I Y++ L++ N+ S DYT P+
Sbjct: 178 LNGADIYSD--CNTLKIEYAKTDKLNVFKNDQSSWDYTNPN 216
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC-TLR 84
+ S +G V +I F K+ G Q++V+F D E+A AK AL+G I C TL+
Sbjct: 141 ICSPYGQVVRIVIFRKS-GMQSMVEFDDVESAKRAKQALNGADI--------YSDCNTLK 191
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYL 110
I Y+ L+V S DYTNP L
Sbjct: 192 IEYAKTDKLNVFKNDQSSWDYTNPNL 217
>gi|291224827|ref|XP_002732404.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Saccoglossus kowalevskii]
Length = 423
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Query: 153 DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 212
DV+H + + FGPVQ+I +F KN G+Q +I+YP + +A AK +L G IY G C L I
Sbjct: 104 DVMHTICNPFGPVQRIVIFKKN-GVQTMIEYPLIYSASRAKASLNGADIY-SGCCTLKIE 161
Query: 213 YSRHTDLSIKVNNDRSRDYTLPS 235
Y+R T L++ N++ + DYT P+
Sbjct: 162 YARPTRLNVYKNDNETYDYTNPT 184
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+ + FG V +I F+K G Q ++++ +AS AK +L+G I G CTL+I
Sbjct: 109 ICNPFGPVQRIVIFKKN-GVQTMIEYPLIYSASRAKASLNGADIYS-------GCCTLKI 160
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + + DYTNP L
Sbjct: 161 EYARPTRLNVYKNDNETYDYTNPTL 185
>gi|386768311|ref|NP_001246426.1| smooth, isoform M [Drosophila melanogaster]
gi|383302598|gb|AFH08179.1| smooth, isoform M [Drosophila melanogaster]
Length = 497
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 87/170 (51%), Gaps = 23/170 (13%)
Query: 128 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 183
D ++ PE+ +LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 184 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPM---- 238
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + +
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTGEILPIK 185
Query: 239 -VNSQPSILGQQPV---PMVGATANQYNGAQFAPPPPEQPMMHQPTAAGW 284
+ + S L Q+P+ P++G GA F PP P H T W
Sbjct: 186 EIGNGRSPLLQEPLYEPPLLGP------GAAF--PPFGAPEYHTTTPENW 227
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 107 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 158
Query: 91 TDLSV-KFQSHRSRDYT 106
L+V K + S DYT
Sbjct: 159 EKLNVYKNEPDTSWDYT 175
>gi|386768313|ref|NP_001246427.1| smooth, isoform O [Drosophila melanogaster]
gi|383302599|gb|AFH08180.1| smooth, isoform O [Drosophila melanogaster]
Length = 494
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 86/170 (50%), Gaps = 24/170 (14%)
Query: 128 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 183
D ++ PE+ +LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 184 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNSQ 242
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + ++ S+
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTGEILPSK 185
Query: 243 P--------SILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGW 284
+L QP P++G GA F PP P H T W
Sbjct: 186 SLFSIPENVVMLESQP-PLLGP------GAAF--PPFGAPEYHTTTPENW 226
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 107 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 158
Query: 91 TDLSV-KFQSHRSRDYTNPYLPVAPS 115
L+V K + S DYT + PS
Sbjct: 159 EKLNVYKNEPDTSWDYTLSTGEILPS 184
>gi|432114048|gb|ELK36095.1| Heterogeneous nuclear ribonucleoprotein L-like protein [Myotis
davidii]
Length = 628
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 70/125 (56%), Gaps = 12/125 (9%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQ-----YPDVQTAV 190
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA+I + V A
Sbjct: 263 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMISLIELMFESVLCAQ 321
Query: 191 VAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS-----QPSI 245
AK AL G IY G C L I Y+R T L++ N++ S DYT P + + +I
Sbjct: 322 KAKAALNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAI 380
Query: 246 LGQQP 250
LG+ P
Sbjct: 381 LGEHP 385
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQ-----FSDTETASSAKNALDGRSIPRYLLPENMGP 80
V + G V +I F++ G QA++ F A AK AL+G I G
Sbjct: 285 VCNPVGKVQRIVIFKRN-GIQAMISLIELMFESVLCAQKAKAALNGADI-------YAGC 336
Query: 81 CTLRITYSAHTDLSVKFQSHRSRDYTNPYL 110
CTL+I Y+ T L+V + S DYT PYL
Sbjct: 337 CTLKIEYARPTRLNVIRNDNDSWDYTKPYL 366
>gi|399216457|emb|CCF73145.1| unnamed protein product [Babesia microti strain RI]
Length = 526
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 62/113 (54%), Gaps = 6/113 (5%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN-GGLQALIQYPDVQTAVVAKE 194
+ +LL SI N+ Y V ++++H +FS FG V KI F KN QA +Q+ + A
Sbjct: 154 TKILLVSITNLVYPVDIELIHFLFSKFGTVNKIVCFSKNPATFQAFVQFEHHSQSKEALA 213
Query: 195 ALEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSIL 246
AL IY C +H+SYS DL +K N+ RS DYT S P+++ P L
Sbjct: 214 ALNNRNIYSD--CNTIHVSYSNMEDLIVKSNSARSWDYT--SAPLLDRPPDYL 262
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 26 VFSAFGFVHKITTFEKT-AGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC-TL 83
+FS FG V+KI F K A FQA VQF + A AL+ R+I C T+
Sbjct: 176 LFSKFGTVNKIVCFSKNPATFQAFVQFEHHSQSKEALAALNNRNI--------YSDCNTI 227
Query: 84 RITYSAHTDLSVKFQSHRSRDYTN-PYLPVAPSAIDASGQ 122
++YS DL VK S RS DYT+ P L P + GQ
Sbjct: 228 HVSYSNMEDLIVKSNSARSWDYTSAPLLDRPPDYLRGRGQ 267
>gi|226481403|emb|CAX73599.1| Heterogeneous nuclear ribonucleoprotein L [Schistosoma japonicum]
Length = 535
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 50/217 (23%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
VF FG + I QAL++F D +A A + C+
Sbjct: 37 RVFEQFGSIRDIAMIPHKG--QALIEFDDINSAERA-----------------VARCSEN 77
Query: 85 ITYSAHTDLSVKFQS-----HR--SRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 137
A+ L V + + HR D +P LP PES
Sbjct: 78 AVMFANHRLKVNYSTSKRVIHRPLENDNQHPELP----------------------PESR 115
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL+ ++ N QY +T+DV+H + + G V +I + K +QA++++ + + A AK L
Sbjct: 116 VLILTVYNAQYPITVDVIHQITAKHGRVLRIVILRKT-RIQAMVEFKNTEEARTAKRHLN 174
Query: 198 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 234
G IY G C L + ++R T L++ N+ S D+ P
Sbjct: 175 GADIY-SGCCTLKVEFARPTRLTVTRNDQDSWDFENP 210
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+ + G V +I KT QA+V+F +TE A +AK L+G I G CTL+
Sbjct: 135 QITAKHGRVLRIVILRKTR-IQAMVEFKNTEEARTAKRHLNGADI-------YSGCCTLK 186
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAP-SAIDASGQLSV 125
+ ++ T L+V S D+ NP L +P + D G +S+
Sbjct: 187 VEFARPTRLTVTRNDQDSWDFENPLLLSSPLNEADGRGDISL 228
>gi|195335919|ref|XP_002034610.1| GM19821 [Drosophila sechellia]
gi|194126580|gb|EDW48623.1| GM19821 [Drosophila sechellia]
Length = 237
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 67/113 (59%), Gaps = 7/113 (6%)
Query: 128 DGKKLEPES----NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 183
D ++ PE+ ++LL +I N Y +T+DVLH + GPV +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGPVLRIVIFKKN-GVQAMVEF 126
Query: 184 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPS 235
++ A A+E L G IY G C L I Y++ L++ N D S DYTL +
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLST 178
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 107 GPVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 158
Query: 91 TDLSV-KFQSHRSRDYTNPYLPVAPSAI 117
L+V K + S DYT + PSA
Sbjct: 159 EKLNVYKNEPDTSWDYTLSTGEILPSAF 186
>gi|351695246|gb|EHA98164.1| Heterogeneous nuclear ribonucleoprotein L [Heterocephalus glaber]
Length = 539
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 67/101 (66%), Gaps = 3/101 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ-TAVVAKE 194
++VLL +I N Y++T DVL+ + + GPVQ+I +F KN G+QA+++YP ++ +A AK
Sbjct: 130 NSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEYPLLRNSAQRAKA 188
Query: 195 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
+L G IY G C L I Y++ T L++ N+ + DYT P+
Sbjct: 189 SLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPN 228
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 31 GFVHKITTFEKTAGFQALVQF-SDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSA 89
G V +I F K G QA+V++ +A AK +L+G I G CTL+I Y+
Sbjct: 157 GPVQRIVIFRKN-GVQAMVEYPLLRNSAQRAKASLNGADIYS-------GCCTLKIEYAK 208
Query: 90 HTDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 209 PTRLNVFKNDQDTWDYTNPNL 229
>gi|17136488|ref|NP_476731.1| smooth, isoform A [Drosophila melanogaster]
gi|78707266|ref|NP_001027440.1| smooth, isoform E [Drosophila melanogaster]
gi|1321808|emb|CAA66282.1| smooth [Drosophila melanogaster]
gi|7302450|gb|AAF57535.1| smooth, isoform A [Drosophila melanogaster]
gi|71911687|gb|AAZ52802.1| smooth, isoform E [Drosophila melanogaster]
Length = 475
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 79/162 (48%), Gaps = 29/162 (17%)
Query: 128 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 183
D ++ PE+ +LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 184 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNSQ 242
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + P
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTEP----- 180
Query: 243 PSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGW 284
P++G GA F PP P H T W
Sbjct: 181 ---------PLLGP------GAAF--PPFGAPEYHTTTPENW 205
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 107 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 158
Query: 91 TDLSV-KFQSHRSRDYT 106
L+V K + S DYT
Sbjct: 159 EKLNVYKNEPDTSWDYT 175
>gi|328724092|ref|XP_001949062.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Acyrthosiphon pisum]
Length = 428
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 67/111 (60%), Gaps = 5/111 (4%)
Query: 128 DGKKLEPES---NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYP 184
DG++ E+ ++LL +I + Y + DV+H + G V +I +F K G +QA+++Y
Sbjct: 42 DGRRKNAETQPNHILLLTITKVTYPINTDVIHTISKDHGNVMRIVIFRKRG-VQAMVEYE 100
Query: 185 DVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
+V+ A+ AK+ ++G IY G C L + Y++ + L++ N+ + DYT P+
Sbjct: 101 EVEQAIRAKQLMDGADIYQGC-CTLRVEYAKPSKLNVYKNDSETWDYTTPN 150
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V++ + E A AK +DG I + G CTLR+ Y+
Sbjct: 80 GNVMRIVIFRK-RGVQAMVEYEEVEQAIRAKQLMDGADIYQ-------GCCTLRVEYAKP 131
Query: 91 TDLSVKFQSHRSRDYTNP 108
+ L+V + DYT P
Sbjct: 132 SKLNVYKNDSETWDYTTP 149
>gi|326428995|gb|EGD74565.1| hypothetical protein PTSG_05929 [Salpingoeca sp. ATCC 50818]
Length = 554
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 7/103 (6%)
Query: 137 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG------GLQALIQYPDVQTAV 190
VL+ ++ N Y + +DV++ V S G V +I M KNG +AL+++PD TA
Sbjct: 112 KVLMMTVMNASYPINVDVIYAVCSPLGRVLRIVMIRKNGVQSAPPTARALVEFPDANTAA 171
Query: 191 VAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 233
+L+G IY G C L I YS+ ++++ N++ +RD+T+
Sbjct: 172 AVMSSLQGANIYQ-GCCTLRIEYSKADRVNVRYNSEETRDFTV 213
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 15/88 (17%)
Query: 26 VFSAFGFVHKITTFEKTAGFQ-------ALVQFSDTETASSAKNALDGRSIPRYLLPENM 78
V S G V +I K G Q ALV+F D TA++ ++L G +I
Sbjct: 133 VCSPLGRVLRIVMIRKN-GVQSAPPTARALVEFPDANTAAAVMSSLQGANI-------YQ 184
Query: 79 GPCTLRITYSAHTDLSVKFQSHRSRDYT 106
G CTLRI YS ++V++ S +RD+T
Sbjct: 185 GCCTLRIEYSKADRVNVRYNSEETRDFT 212
>gi|195056920|ref|XP_001995181.1| GH22768 [Drosophila grimshawi]
gi|193899387|gb|EDV98253.1| GH22768 [Drosophila grimshawi]
Length = 482
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 69/115 (60%), Gaps = 7/115 (6%)
Query: 128 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 183
D ++ PE+ +LL +I N Y +T+DVLH + + G V +I +F KN G+QA++++
Sbjct: 75 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICNPHGQVLRIVIFKKN-GVQAMVEF 133
Query: 184 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI-KVNNDRSRDYTLPSTP 237
++ +A A+E L G IY G C L I +++ L++ K +D S DYTL + P
Sbjct: 134 DNLDSATRARENLNGADIY-AGCCTLKIDFAKPEKLNVYKNESDTSWDYTLSTEP 187
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 9/77 (11%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F+K G QA+V+F + ++A+ A+ L+G I G CTL+I ++
Sbjct: 114 GQVLRIVIFKKN-GVQAMVEFDNLDSATRARENLNGADI-------YAGCCTLKIDFAKP 165
Query: 91 TDLSV-KFQSHRSRDYT 106
L+V K +S S DYT
Sbjct: 166 EKLNVYKNESDTSWDYT 182
>gi|195431604|ref|XP_002063826.1| GK15699 [Drosophila willistoni]
gi|194159911|gb|EDW74812.1| GK15699 [Drosophila willistoni]
Length = 478
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 66/115 (57%), Gaps = 7/115 (6%)
Query: 128 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 183
D ++ PE+ +LL +I N Y +T+DVLH + + G V +I +F KN G+QA++++
Sbjct: 71 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICNPHGQVLRIVIFKKN-GVQAMVEF 129
Query: 184 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTP 237
+ A A+E L G IY G C L I Y++ L++ N D S DYTL + P
Sbjct: 130 DSLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTEP 183
>gi|358254215|dbj|GAA54232.1| heterogeneous nuclear ribonucleoprotein L, partial [Clonorchis
sinensis]
Length = 561
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
Query: 132 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
L ++VLL ++ N+Q+ VTL V+H + S F V +I MF K +QA++++ V+ A
Sbjct: 177 LSTVNHVLLYTVFNVQHPVTLKVIHQITSMFAEVVRIVMFRK-SNIQAMVEFKSVEDARR 235
Query: 192 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY 231
K+ L G IY G C L + Y+R T L++K N++ + D+
Sbjct: 236 VKQNLNGADIY-SGCCTLKVDYARPTRLTVKRNDEDTWDF 274
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 46/101 (45%), Gaps = 14/101 (13%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+ S F V +I F K + QA+V+F E A K L+G I G CTL++
Sbjct: 203 ITSMFAEVVRIVMFRK-SNIQAMVEFKSVEDARRVKQNLNGADI-------YSGCCTLKV 254
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVG 126
Y+ T L+VK + D+ N +A DA SVG
Sbjct: 255 DYARPTRLTVKRNDEDTWDFEN------NNAADAEPDDSVG 289
>gi|294946321|ref|XP_002785022.1| polypyrimidine tract binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239898406|gb|EER16818.1| polypyrimidine tract binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 566
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 132 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
L P + +LL +I N+ Y V + ++ V S + ++K+ +F + LIQ ++ AV
Sbjct: 122 LHPPNRILLFTITNVVYPVNVSMIAQVMSRYNALEKVVIFTRGNATHCLIQTSSLEAAVA 181
Query: 192 AKEALEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
AK L+G I+ C + + +S + L +K NN+RS DYT PS P
Sbjct: 182 AKTQLDGQNIFT--HCNTIRVQFSELSKLEVKYNNERSWDYTNPSLP 226
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 84/182 (46%), Gaps = 17/182 (9%)
Query: 24 AHVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTL 83
A V S + + K+ F + L+Q S E A +AK LDG++I + T+
Sbjct: 146 AQVMSRYNALEKVVIFTRGNATHCLIQTSSLEAAVAAKTQLDGQNIFTHC-------NTI 198
Query: 84 RITYSAHTDLSVKFQSHRSRDYTNPYLPVA-PSAIDASGQLS---VGLDGKKLEPESNVL 139
R+ +S + L VK+ + RS DYTNP LP P A+ SG L G+ G P VL
Sbjct: 199 RVQFSELSKLEVKYNNERSWDYTNPSLPSGPPGAMAGSGLLGPQQRGMSGVAATPVVFVL 258
Query: 140 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDK--NGGLQALIQYPDVQTAVVAKEALE 197
+ ++ T D L +F+ +G V K+ + K N L + + TA+ + +
Sbjct: 259 GLNEKD----TTPDDLAALFAVYGNVVKVKIMYKARNSALVQMQTVGECHTAIAHLKGIR 314
Query: 198 GH 199
H
Sbjct: 315 LH 316
>gi|86170640|ref|XP_966055.1| polypyrimidine tract binding protein, putative [Plasmodium
falciparum 3D7]
gi|46362297|emb|CAG25235.1| polypyrimidine tract binding protein, putative [Plasmodium
falciparum 3D7]
Length = 663
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 4/110 (3%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVVAKE 194
S V+L S+ N+ Y V +++++ +FS G V+KI F +N L QAL+Q+ +V+TA A +
Sbjct: 315 SKVILVSVINLHYPVDIELIYYLFSKCGTVEKIITFSRNPVLYQALVQFDNVETAKEAIK 374
Query: 195 ALEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQP 243
L IYDG C ++I YS +L IK NN S DYT+ + + P
Sbjct: 375 TLHNRNIYDG--CNTINIQYSFLKELVIKGNNSSSWDYTISNEKKTKNFP 422
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 89/213 (41%), Gaps = 35/213 (16%)
Query: 25 HVFSAFGFVHKITTFEKT-AGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTL 83
++FS G V KI TF + +QALVQF + ETA A L R+I G T+
Sbjct: 336 YLFSKCGTVEKIITFSRNPVLYQALVQFDNVETAKEAIKTLHNRNIYD-------GCNTI 388
Query: 84 RITYSAHTDLSVKFQSHRSRDYT------NPYLPV---------APSAIDASGQLSVGLD 128
I YS +L +K + S DYT PV PS +L ++
Sbjct: 389 NIQYSFLKELVIKGNNSSSWDYTISNEKKTKNFPVLQNSHGVLPTPSRKSVDSELYQLME 448
Query: 129 GK-------KLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALI 181
K K+ P +L + ++ L +FS +G V +I + + ALI
Sbjct: 449 KKFKLVDFEKMNPSKTPVLICYNIPKEYTDVNKLFNLFSIYGFVTRIKILREKPD-AALI 507
Query: 182 QYPDVQTAVVAKEALEGHCI----YDGGFCKLH 210
QY + + +A+E L+ I + F K+H
Sbjct: 508 QYSNYIFSSLAQEYLQRARISNQSIEVNFSKIH 540
>gi|442624264|ref|NP_001261093.1| smooth, isoform AB [Drosophila melanogaster]
gi|440214533|gb|AGB93625.1| smooth, isoform AB [Drosophila melanogaster]
Length = 509
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 66/116 (56%), Gaps = 7/116 (6%)
Query: 128 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 183
D ++ PE+ +LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 184 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPM 238
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + M
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTGEM 181
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 107 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 158
Query: 91 TDLSV-KFQSHRSRDYT 106
L+V K + S DYT
Sbjct: 159 EKLNVYKNEPDTSWDYT 175
>gi|291490719|gb|ADE06675.1| MIP19475p [Drosophila melanogaster]
Length = 206
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 7/116 (6%)
Query: 128 DGKKLEPES----NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 183
D ++ PE+ ++LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 77 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 135
Query: 184 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPM 238
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + M
Sbjct: 136 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTREM 190
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 116 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 167
Query: 91 TDLSV-KFQSHRSRDYT 106
L+V K + S DYT
Sbjct: 168 EKLNVYKNEPDTSWDYT 184
>gi|195380768|ref|XP_002049133.1| GJ21415 [Drosophila virilis]
gi|194143930|gb|EDW60326.1| GJ21415 [Drosophila virilis]
Length = 480
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 66/115 (57%), Gaps = 7/115 (6%)
Query: 128 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 183
D ++ PE+ +LL +I N Y +T+DVLH + + G V +I +F KN G+QA++++
Sbjct: 74 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICNPHGQVLRIVIFKKN-GVQAMVEF 132
Query: 184 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI-KVNNDRSRDYTLPSTP 237
+ A A+E L G IY G C L I +++ L++ K D S DYTL + P
Sbjct: 133 DSLDAATRARENLNGADIY-AGCCTLKIDFAKPEKLNVYKNETDTSWDYTLSTEP 186
>gi|195123985|ref|XP_002006482.1| GI18546 [Drosophila mojavensis]
gi|193911550|gb|EDW10417.1| GI18546 [Drosophila mojavensis]
Length = 481
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 66/115 (57%), Gaps = 7/115 (6%)
Query: 128 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 183
D ++ PE+ +LL +I N Y +T+DVLH + + G V +I +F KN G+QA++++
Sbjct: 74 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICNPHGQVLRIVIFKKN-GVQAMVEF 132
Query: 184 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI-KVNNDRSRDYTLPSTP 237
+ A A+E L G IY G C L I +++ L++ K D S DYTL + P
Sbjct: 133 DSLDAATRARENLNGADIY-AGCCTLKIDFAKPEKLNVYKNETDTSWDYTLSTEP 186
>gi|327287724|ref|XP_003228578.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Anolis
carolinensis]
Length = 553
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 97/210 (46%), Gaps = 42/210 (20%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+NVLL +I N Y++T DVL+ + + GPVQ+I +F KNG +QA++++ VQ+A AK +
Sbjct: 156 NNVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKNG-VQAMVEFDSVQSAQRAKAS 214
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 255
L G IY G C L I Y++ T L++ N+ + DYT P++ GQ G
Sbjct: 215 LNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYT---------NPNLSGQ------G 258
Query: 256 ATANQYNGAQFAPP-----PPEQPMMHQPTAA-----GWGAVPPASQSMPMMGNHPYMPP 305
N Q PP P E H G+G PP + M
Sbjct: 259 EPGGNPNKRQRQPPLLGDHPAEYGGPHGGYHGHYHDEGYGPPPPHYEGRRM--------- 309
Query: 306 GSMPMGPGMMQMHM-PGQSGMQHHHGAMPP 334
GP + H PG+ G Q+ H PP
Sbjct: 310 -----GPPVGGRHRGPGRYGPQYGHPPPPP 334
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F K G QA+V+F ++A AK +L+G I G CTL+I Y+
Sbjct: 183 GPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADI-------YSGCCTLKIEYAKP 234
Query: 91 TDLSVKFQSHRSRDYTNPYL 110
T L+V + DYTNP L
Sbjct: 235 TRLNVFKNDQDTWDYTNPNL 254
>gi|358338430|dbj|GAA56814.1| heterogeneous nuclear ribonucleoprotein L [Clonorchis sinensis]
Length = 873
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 39/217 (17%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
F +G + +T + QAL++F+D +A SA + +P + +R
Sbjct: 367 RTFEQYGPIKDVTMMPQRG--QALIEFADISSAESA-------VVRCSEIPLTIANHRVR 417
Query: 85 ITYSAHTDLSVK-FQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASI 143
+ YS + + RDY++ L ES VLL +I
Sbjct: 418 VNYSTSKRIVQRQLGGESGRDYSDGPL------------------------ESRVLLFTI 453
Query: 144 ENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYD 203
N QY +T+DV+H + S G V +I +F K +QA++++ + A AK L G IY
Sbjct: 454 YNAQYPITVDVIHQITSRHGRVLRIVIFRKT-HVQAMVEFKNTDDARNAKRNLNGADIY- 511
Query: 204 GGFCKLHISYSRHTDLSIKVNNDRSRDYT---LPSTP 237
G C L I ++R L++ N+ + DY LP+ P
Sbjct: 512 SGCCTLKIEFARPARLTVLKNDQETWDYENSLLPTDP 548
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
+ S G V +I F KT QA+V+F +T+ A +AK L+G I G CTL+
Sbjct: 467 QITSRHGRVLRIVIFRKT-HVQAMVEFKNTDDARNAKRNLNGADI-------YSGCCTLK 518
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDAS-GQLSVGLDGK 130
I ++ L+V + DY N LP P+ I S G+ +V L G+
Sbjct: 519 IEFARPARLTVLKNDQETWDYENSLLPTDPARIRISDGRANVSLLGR 565
>gi|401402366|ref|XP_003881231.1| gg11844, related [Neospora caninum Liverpool]
gi|325115643|emb|CBZ51198.1| gg11844, related [Neospora caninum Liverpool]
Length = 460
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 4/100 (4%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVVAKEAL 196
V+LAS+ N+ Y V +D++H +FS +G ++KI F K+ + QALIQ+ + + A A L
Sbjct: 15 VVLASVTNLLYPVDIDLIHYLFSKYGEIEKIVTFSKSPTMYQALIQFQNAEQARHALMNL 74
Query: 197 EGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLPS 235
IYDG C L I SR +L +K N +S DYT+ S
Sbjct: 75 HSRNIYDG--CNTLQIQPSRLNELVVKNNTQKSWDYTVQS 112
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 25 HVFSAFGFVHKITTFEKT-AGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTL 83
++FS +G + KI TF K+ +QAL+QF + E A A L R+I G TL
Sbjct: 34 YLFSKYGEIEKIVTFSKSPTMYQALIQFQNAEQARHALMNLHSRNIYD-------GCNTL 86
Query: 84 RITYSAHTDLSVKFQSHRSRDYT 106
+I S +L VK + +S DYT
Sbjct: 87 QIQPSRLNELVVKNNTQKSWDYT 109
>gi|339233762|ref|XP_003381998.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316979122|gb|EFV61952.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 820
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
D + E SNVL+ ++N +Y +T +V+H + G V +I + ++ G+QAL+++ D++
Sbjct: 109 DQLETEAPSNVLIIYVQNAKYPITTEVIHQICKPIGFVNRI-IINRRDGIQALVEFRDIE 167
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ 242
TA VAK+ L G IY G C + I +++ L R+ P+ P+ N+Q
Sbjct: 168 TARVAKQRLNGCDIY-SGCCTVKIEFAKVQFLDSYKQTTRTCKAYTPNVPVTNAQ 221
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 30 FGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSA 89
GFV++I + G QALV+F D ETA AK L+G I G CT++I ++
Sbjct: 143 IGFVNRII-INRRDGIQALVEFRDIETARVAKQRLNGCDI-------YSGCCTVKIEFAK 194
Query: 90 HTDLSVKFQSHRSRDYTNPYLPVA 113
L Q+ R+ P +PV
Sbjct: 195 VQFLDSYKQTTRTCKAYTPNVPVT 218
>gi|386768305|ref|NP_001246423.1| smooth, isoform K [Drosophila melanogaster]
gi|383302595|gb|AFH08176.1| smooth, isoform K [Drosophila melanogaster]
Length = 535
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 68/119 (57%), Gaps = 7/119 (5%)
Query: 128 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 183
D ++ PE+ +LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 184 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNS 241
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + +++
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTVATLST 184
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 107 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 158
Query: 91 TDLSV-KFQSHRSRDYT 106
L+V K + S DYT
Sbjct: 159 EKLNVYKNEPDTSWDYT 175
>gi|386768321|ref|NP_001246430.1| smooth, isoform V [Drosophila melanogaster]
gi|383302603|gb|AFH08183.1| smooth, isoform V [Drosophila melanogaster]
Length = 540
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 65/111 (58%), Gaps = 7/111 (6%)
Query: 128 DGKKLEPES----NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 183
D ++ PE+ ++LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 184 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTL 233
++ A A+E L G IY G C L I Y++ L++ N D S DYTL
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTL 176
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 12/87 (13%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 107 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 158
Query: 91 TDLSV-KFQSHRSRDY---TNPYLPVA 113
L+V K + S DY T LP+A
Sbjct: 159 EKLNVYKNEPDTSWDYTLSTGEILPIA 185
>gi|391333478|ref|XP_003741140.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Metaseiulus occidentalis]
Length = 485
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 70/119 (58%), Gaps = 3/119 (2%)
Query: 114 PSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDK 173
P +D +G+ + L+P ++++L +I N Y + ++V++ + G VQ+I +F K
Sbjct: 2 PFDMDDNGRAPKRQRTEALKP-NHIVLMTIRNALYPIDVEVIYKISHTLGRVQRIVIFRK 60
Query: 174 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 232
N G+QAL+++ +V A AK L+G IY G C L + Y++ + L++ N+ + DYT
Sbjct: 61 N-GVQALVEFENVDQATRAKNELDGADIYQ-GCCTLKLEYAKPSKLNVYKNDKDTWDYT 117
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 29 AFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYS 88
G V +I F K G QALV+F + + A+ AKN LDG I + G CTL++ Y+
Sbjct: 48 TLGRVQRIVIFRKN-GVQALVEFENVDQATRAKNELDGADIYQ-------GCCTLKLEYA 99
Query: 89 AHTDLSVKFQSHRSRDYT 106
+ L+V + DYT
Sbjct: 100 KPSKLNVYKNDKDTWDYT 117
>gi|386768329|ref|NP_001246434.1| smooth, isoform AA [Drosophila melanogaster]
gi|383302607|gb|AFH08187.1| smooth, isoform AA [Drosophila melanogaster]
Length = 508
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Query: 128 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 183
D ++ PE+ +LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 63 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 121
Query: 184 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPS 235
++ A A+E L G IY G C L I Y++ L++ N D S DYTL +
Sbjct: 122 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLST 173
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 57/118 (48%), Gaps = 14/118 (11%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 102 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 153
Query: 91 TDLSV-KFQSHRSRDY---TNPYLPVAPSAIDASGQLSVGLDGKKL--EPESNVLLAS 142
L+V K + S DY T LP+ S L L GK L PE+ V+L S
Sbjct: 154 EKLNVYKNEPDTSWDYTLSTGEILPIKEIGNGRSPLLQEPLYGKSLFSIPENVVMLES 211
>gi|149641747|ref|XP_001507993.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L, partial
[Ornithorhynchus anatinus]
Length = 360
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 86/177 (48%), Gaps = 22/177 (12%)
Query: 153 DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 212
DVL+ V + G VQ+I +F +NG +QA++++ V A AK AL G IY G C L I
Sbjct: 1 DVLYTVCNPVGKVQRIVIFKRNG-IQAMVEFESVLCAQKAKAALNGADIY-AGCCTLKIE 58
Query: 213 YSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPE 272
Y+R T L++ N++ S DYT P + + G+Q ++G + + + P
Sbjct: 59 YARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPL 115
Query: 273 QPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPPGSMPMGPGMMQMHM 319
P+ P+ G+ +P AS S GN P GS+ M G+ Q+ M
Sbjct: 116 LPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PSGSVVMVSGLHQLKM 165
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 6 VCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKI 57
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 58 EYARPTRLNVIRNDNDSWDYTKPYL 82
>gi|194881395|ref|XP_001974833.1| GG20898 [Drosophila erecta]
gi|190658020|gb|EDV55233.1| GG20898 [Drosophila erecta]
Length = 210
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Query: 128 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 183
D ++ PE+ +LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 184 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPS 235
++ A A+E L G IY G C L I Y++ L++ N D S DYTL +
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLST 178
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 107 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 158
Query: 91 TDLSV-KFQSHRSRDYT 106
L+V K + S DYT
Sbjct: 159 EKLNVYKNEPDTSWDYT 175
>gi|68068337|ref|XP_676078.1| polypyrimidine tract binding protein [Plasmodium berghei strain
ANKA]
gi|56495606|emb|CAH97516.1| polypyrimidine tract binding protein, putative [Plasmodium berghei]
Length = 453
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 4/102 (3%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVVAKE 194
S V+L S+ NMQY V +++++ +FS G V+KI K + QAL+Q +Q A A +
Sbjct: 105 SKVILVSVVNMQYPVDMELIYYLFSKCGIVEKIITISKKTSIFQALVQLESIQVAKEAIK 164
Query: 195 ALEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLPS 235
L IYDG C L I YS +L IK NN ++ DYT P+
Sbjct: 165 TLHNRNIYDG--CNTLQIQYSFLKELIIKNNNSQAWDYTTPN 204
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 101/233 (43%), Gaps = 43/233 (18%)
Query: 25 HVFSAFGFVHKITTF-EKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTL 83
++FS G V KI T +KT+ FQALVQ + A A L R+I G TL
Sbjct: 126 YLFSKCGIVEKIITISKKTSIFQALVQLESIQVAKEAIKTLHNRNIYD-------GCNTL 178
Query: 84 RITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGL------DGKKLE---- 133
+I YS +L +K + ++ DYT P + + S Q S G+ + K+ E
Sbjct: 179 QIQYSFLKELIIKNNNSQAWDYTTP--NPQKNKNNFSFQTSHGVLPTPTRNIKETELYKL 236
Query: 134 PESNVLLASIENMQYAVT--------------LDVLHMVFSAFGPVQKIAMFDKNGGLQA 179
E + E + T ++ L +FS +G V +I + + A
Sbjct: 237 LERKFKIVDFETKNTSKTPVLICYNIPKDYSDVNKLFNLFSVYGYVSRIKILREKPD-SA 295
Query: 180 LIQYPDVQTAVVAKEALEGHCIYDGGFCK--LHISYSRHTDLSIKVNNDRSRD 230
LIQY + + +A+E C+ C+ L + +S+ D+ I D++RD
Sbjct: 296 LIQYSNYLFSSLAQE-----CLQHAKICQNILELHFSKIYDIKISY-QDKNRD 342
>gi|221484270|gb|EEE22566.1| polypyrimidine track-binding protein, putative [Toxoplasma gondii
GT1]
gi|221505749|gb|EEE31394.1| polypyrimidine track-binding protein, putative [Toxoplasma gondii
VEG]
Length = 446
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
Query: 134 PES-NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVV 191
PES V+LAS+ N+ Y V +D++H +FS +G ++KI F K+ + QALIQ+ A
Sbjct: 10 PESFRVVLASVTNLLYPVDIDLIHYLFSKYGEIEKIVTFSKSPTMYQALIQFQSPDQARH 69
Query: 192 AKEALEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLPS 235
A L IYDG C L I SR +L +K N +S DYT+ S
Sbjct: 70 ALMNLHSRNIYDG--CNTLQIQPSRLNELVVKNNTQKSWDYTVQS 112
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 25 HVFSAFGFVHKITTFEKT-AGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTL 83
++FS +G + KI TF K+ +QAL+QF + A A L R+I G TL
Sbjct: 34 YLFSKYGEIEKIVTFSKSPTMYQALIQFQSPDQARHALMNLHSRNIYD-------GCNTL 86
Query: 84 RITYSAHTDLSVKFQSHRSRDYT 106
+I S +L VK + +S DYT
Sbjct: 87 QIQPSRLNELVVKNNTQKSWDYT 109
>gi|237838325|ref|XP_002368460.1| polypyrimidine track-binding protein, putative [Toxoplasma gondii
ME49]
gi|211966124|gb|EEB01320.1| polypyrimidine track-binding protein, putative [Toxoplasma gondii
ME49]
Length = 446
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
Query: 134 PES-NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVV 191
PES V+LAS+ N+ Y V +D++H +FS +G ++KI F K+ + QALIQ+ A
Sbjct: 10 PESFRVVLASVTNLLYPVDIDLIHYLFSKYGEIEKIVTFSKSPTMYQALIQFQSPDQARH 69
Query: 192 AKEALEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLPS 235
A L IYDG C L I SR +L +K N +S DYT+ S
Sbjct: 70 ALMNLHSRNIYDG--CNTLQIQPSRLNELVVKNNTQKSWDYTVQS 112
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 25 HVFSAFGFVHKITTFEKT-AGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTL 83
++FS +G + KI TF K+ +QAL+QF + A A L R+I G TL
Sbjct: 34 YLFSKYGEIEKIVTFSKSPTMYQALIQFQSPDQARHALMNLHSRNIYD-------GCNTL 86
Query: 84 RITYSAHTDLSVKFQSHRSRDYT 106
+I S +L VK + +S DYT
Sbjct: 87 QIQPSRLNELVVKNNTQKSWDYT 109
>gi|256071583|ref|XP_002572119.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|350645120|emb|CCD60181.1| heterogeneous nuclear ribonucleoprotein l (hnrnp l), putative
[Schistosoma mansoni]
Length = 710
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 90/178 (50%), Gaps = 32/178 (17%)
Query: 78 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 137
+GP +R+ +S+ T V + H+S+ SA+D++ ++
Sbjct: 109 VGPNRVRLEFSSETITPVIDRKHQSQS----------SALDSNS-------------PTH 145
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN--GGLQALIQYPDVQTAVVAKEA 195
+L I N +Y +T+DV+ + S G + + + KN L+AL+++ +V+ A AKE
Sbjct: 146 ILHLDISNAEYPITVDVIKAICSPHGNILRTFIGKKNVDRSLEALVEFENVEEARAAKEQ 205
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS----TPMVNS--QPSILG 247
L+G IY G C L ++YSR + + N+ S D+T PS P+ NS Q ++LG
Sbjct: 206 LDGADIYS-GCCNLTVAYSRLQRVHVTQNDSESWDFTGPSGNLEGPLNNSSTQRTLLG 262
>gi|70926044|ref|XP_735622.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56509445|emb|CAH87610.1| hypothetical protein PC302548.00.0 [Plasmodium chabaudi chabaudi]
Length = 201
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVVAKE 194
S V+L S+ NMQY V +++++ +FS G V+KI K + QAL+Q ++ A A +
Sbjct: 79 SKVILVSVVNMQYPVDIELIYYLFSKCGVVEKIITISKKTSIFQALVQLESIEVAKEAIK 138
Query: 195 ALEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPS 244
L IYDG C L I YS +L +K NN +S DYT S P N S
Sbjct: 139 TLHNRNIYDG--CNTLQIQYSFLKELIVKNNNSQSWDYT-TSNPQRNKSNS 186
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 25 HVFSAFGFVHKITTF-EKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTL 83
++FS G V KI T +KT+ FQALVQ E A A L R+I G TL
Sbjct: 100 YLFSKCGVVEKIITISKKTSIFQALVQLESIEVAKEAIKTLHNRNIYD-------GCNTL 152
Query: 84 RITYSAHTDLSVKFQSHRSRDYT 106
+I YS +L VK + +S DYT
Sbjct: 153 QIQYSFLKELIVKNNNSQSWDYT 175
>gi|112280295|gb|ABI14681.1| polypyrimidine tract binding protein [Plasmodium chabaudi chabaudi]
gi|112280297|gb|ABI14682.1| polypyrimidine tract binding protein [Plasmodium chabaudi chabaudi]
Length = 142
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVVAKE 194
S V+L S+ NMQY V +++++ +FS G V+KI K + QAL+Q ++ A A +
Sbjct: 28 SKVILVSVVNMQYPVDIELIYYLFSKCGVVEKIITISKKTSIFQALVQLESIEVAKEAIK 87
Query: 195 ALEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPS 244
L IYDG C L I YS +L +K NN +S DYT S P N S
Sbjct: 88 TLHNRNIYDG--CNTLQIQYSFLKELIVKNNNSQSWDYT-TSNPQRNKNNS 135
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 25 HVFSAFGFVHKITTF-EKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTL 83
++FS G V KI T +KT+ FQALVQ E A A L R+I G TL
Sbjct: 49 YLFSKCGVVEKIITISKKTSIFQALVQLESIEVAKEAIKTLHNRNIYD-------GCNTL 101
Query: 84 RITYSAHTDLSVKFQSHRSRDYT 106
+I YS +L VK + +S DYT
Sbjct: 102 QIQYSFLKELIVKNNNSQSWDYT 124
>gi|341890178|gb|EGT46113.1| hypothetical protein CAEBREN_06779 [Caenorhabditis brenneri]
Length = 601
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 80/162 (49%), Gaps = 12/162 (7%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VL+ ++ N QY + DV++ + +A G V ++A+ K +QAL+++ ++ A AK A
Sbjct: 121 NKVLVVTVLNAQYPIDADVIYQISNAQGKVLRVAVMHKPTIVQALVEFESMEVAKAAKHA 180
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPST--PMVNSQPSILGQQPVPM 253
+ G IY G C L + +++ + + + RD+TLP P + + +++ +P
Sbjct: 181 MNGADIY-SGCCTLKVEFAKPDRVRVVRQDKDQRDFTLPDNEVPQDSGRKTLIPSRPDDH 239
Query: 254 ------VGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPP 289
+ Y+ +AP PP QP P GA PP
Sbjct: 240 YYDRRPYEEERDPYDRRDYAPQPPPQPHYGYPPR---GAGPP 278
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+ +A G V ++ K QALV+F E A +AK+A++G I G CTL++
Sbjct: 143 ISNAQGKVLRVAVMHKPTIVQALVEFESMEVAKAAKHAMNGADI-------YSGCCTLKV 195
Query: 86 TYSAHTDLSVKFQSHRSRDYTNP 108
++ + V Q RD+T P
Sbjct: 196 EFAKPDRVRVVRQDKDQRDFTLP 218
>gi|414872529|tpg|DAA51086.1| TPA: hypothetical protein ZEAMMB73_223567 [Zea mays]
Length = 357
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%), Gaps = 3/45 (6%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIP 70
VFSAFG+VHKI TFEK QAL+Q++D TAS+A+ +LDGRSIP
Sbjct: 272 VFSAFGYVHKIATFEK---LQALIQYTDAATASAARESLDGRSIP 313
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 156 HMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 210
+VFSAFG V KIA F+K LQALIQY D TA A+E+L+G I G LH
Sbjct: 270 RLVFSAFGYVHKIATFEK---LQALIQYTDAATASAARESLDGRSIPSGNLLMLH 321
>gi|281205212|gb|EFA79405.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 437
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 158 VFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHT 217
+FS +G V +I +F K G LQA +++ +A VAK+AL G IY G C L I ++R
Sbjct: 120 IFSPYGRVLRIVIFQKKG-LQAFVEFESPYSAWVAKDALNGQDIYTGS-CTLQIDFARVN 177
Query: 218 DLSIKVNNDRSRDYTL 233
L++KVN++++ DYT+
Sbjct: 178 KLNVKVNDEKTTDYTM 193
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 115/258 (44%), Gaps = 62/258 (24%)
Query: 17 LSASGERAHVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPE 76
+S G++ +FS +G V +I F+K G QA V+F +A AK+AL+G+ I
Sbjct: 113 ISLFGQK--IFSPYGRVLRIVIFQK-KGLQAFVEFESPYSAWVAKDALNGQDI------- 162
Query: 77 NMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL--------------PVAPSAIDASG- 121
G CTL+I ++ L+VK ++ DYT + P AP+ +D +G
Sbjct: 163 YTGSCTLQIDFARVNKLNVKVNDEKTTDYTMDLIQPPGAPIGMTAHGYPFAPAHMDPTGF 222
Query: 122 ------------------QLSVGLD-------GKKLEPESNVLLASIENMQYAVTLDVLH 156
+VG+ G +EP + ++ + + +T D L
Sbjct: 223 TKQSAYMMNPSAAAAAPHPSAVGVQPHHPGFMGYPMEPMTQSVIM-VHKLPENITADQLF 281
Query: 157 MVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFC--KLHISYS 214
+F +G V KI M N A++Q D + A A+ HC+ K+ + +S
Sbjct: 282 NIFCLYGTVLKIKML-HNTKSGAMVQMAD---GIQADSAI--HCLNLANIFGQKIQVFHS 335
Query: 215 RHTDLSIKVNNDRSRDYT 232
RH ++ ++++++DY+
Sbjct: 336 RHPSIA---DSEKTKDYS 350
>gi|55733800|gb|AAV59307.1| putative polypyrimidine track-binding protein [Oryza sativa
Japonica Group]
Length = 389
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%)
Query: 107 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
N Y+ + + Q S G + + + +LL +I +M Y +T++VLH VF A+G V+
Sbjct: 64 NVYMQFSSHQELTTDQNSHGRNSDQESEPNRILLVTIHHMMYPITVEVLHQVFKAYGYVE 123
Query: 167 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 198
KI F K+ G QALIQY +Q A+ A AL G
Sbjct: 124 KIVTFQKSAGFQALIQYQSLQEAMDAFGALHG 155
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 32/216 (14%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
VF A+G+V KI TF+K+AGFQAL+Q+ + A A AL G P ++ L
Sbjct: 115 VFKAYGYVEKIVTFQKSAGFQALIQYQSLQEAMDAFGALHGFHKP--IIAYRTASKGLSA 172
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
+Y+ Q R+ T + G L G+ G E L+ S N
Sbjct: 173 SYA---------QMGRAAMITAAF----------GGTLPPGVTGTN---ERCTLIVSNLN 210
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 205
+ D L +FS +G + +I + +N AL++ D A +A L+G ++
Sbjct: 211 TD-KINEDKLFNLFSLYGNIVRIKIL-RNKPDHALVEMADGFQAELAVHYLKGAVLFAK- 267
Query: 206 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS 241
KL ++YS++ +++ + + DYT S NS
Sbjct: 268 --KLEVNYSKYPNIT---SAPDAHDYTTSSLNRFNS 298
>gi|345494580|ref|XP_001604099.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Nasonia
vitripennis]
Length = 520
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 42/140 (30%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYP----------- 184
++VLL +I N Y +T++VLH + G VQ+I +F KNG +QA+++YP
Sbjct: 33 NHVLLFTIINPVYPITVEVLHAISHQSGTVQRIVIFKKNG-VQAMVEYPLHTAILLFVVF 91
Query: 185 -----------------------------DVQTAVVAKEALEGHCIYDGGFCKLHISYSR 215
V++A AKEAL G IY G C L I Y++
Sbjct: 92 FFFLFNCMLISITTSYPKSLTEFFEITFDSVESATRAKEALHGADIYSG-CCTLKIDYAK 150
Query: 216 HTDLSIKVNNDRSRDYTLPS 235
T L++ N+ S DYT P+
Sbjct: 151 PTKLNVYKNDSESWDYTTPA 170
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Query: 49 VQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNP 108
+ F E+A+ AK AL G I G CTL+I Y+ T L+V S DYT P
Sbjct: 117 ITFDSVESATRAKEALHGADI-------YSGCCTLKIDYAKPTKLNVYKNDSESWDYTTP 169
Query: 109 YLPVAPSAIDASGQ 122
+ D SG
Sbjct: 170 AIGAGSHKNDTSGN 183
>gi|302782656|ref|XP_002973101.1| hypothetical protein SELMODRAFT_99329 [Selaginella moellendorffii]
gi|300158854|gb|EFJ25475.1| hypothetical protein SELMODRAFT_99329 [Selaginella moellendorffii]
Length = 410
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 68/133 (51%), Gaps = 23/133 (17%)
Query: 133 EPE------SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 186
EPE S VLLA I N Y + +D+LH VFS G ++KI +F K +QA I +
Sbjct: 67 EPENPKVEASRVLLAIIHNPLYQMNVDILHQVFSPHGNIEKIVIFHKAAAVQAFIVFDSD 126
Query: 187 QTAVVAKEALEGHCIYDGGFCKLHISYSR-------HTDLSIKVNNDRSRDYTLPSTP-- 237
+ A AK AL+G I+DG CKL I +S + +K+N RDYT S P
Sbjct: 127 EAAAAAKSALQGRQIFDGC-CKLDIKFSIFAFRFLGNYKEPVKMN----RDYTNNSLPGD 181
Query: 238 ---MVNSQPSILG 247
+ Q SILG
Sbjct: 182 SQSKTSPQASILG 194
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 108/249 (43%), Gaps = 54/249 (21%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
VFS G + KI F K A QA + F E A++AK+AL GR I G C L
Sbjct: 97 QVFSPHGNIEKIVIFHKAAAVQAFIVFDSDEAAAAAKSALQGRQIFD-------GCCKLD 149
Query: 85 ITYSAHTDLSVKFQSH------RSRDYTNPYLP------VAPSA---------------- 116
I +S + +F + +RDYTN LP +P A
Sbjct: 150 IKFSI---FAFRFLGNYKEPVKMNRDYTNNSLPGDSQSKTSPQASILGAGTAFSTMKQGG 206
Query: 117 ---IDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDK 173
+ SG L G+ G + +L++++ + V + L +FS +G V +I MF+
Sbjct: 207 FGSVPLSGVLPFGVTGSN--DKCTLLVSNLH--EVLVYEEKLFNLFSGYGRVLRIKMFE- 261
Query: 174 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 233
QAL+Q D A +A L+G + + IS+S+H + + R+RD+T+
Sbjct: 262 -NAKQALVQLADGVQAELALNFLKGAPLLGSA---MEISFSKHN----TIRHPRTRDFTM 313
Query: 234 PSTPMVNSQ 242
NS+
Sbjct: 314 DPYNRFNSE 322
>gi|47208707|emb|CAF90432.1| unnamed protein product [Tetraodon nigroviridis]
Length = 499
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 7/106 (6%)
Query: 150 VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKL 209
+T DVL+ V + G V +I +F +NG +QA++++ V A AK AL G IY G C L
Sbjct: 136 LTQDVLYTVCNPVGNVLRIVIFKRNG-IQAMVEFESVHCAQKAKAALNGADIY-AGCCTL 193
Query: 210 HISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS-----QPSILGQQP 250
I Y+R T L++ N++ S DYT P + + +ILG+ P
Sbjct: 194 KIEYARPTRLNVIKNDNESWDYTKPYLVRRDRGKGRQRQAILGEHP 239
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
V + G V +I F++ G QA+V+F A AK AL+G I G CTL+I
Sbjct: 144 VCNPVGNVLRIVIFKRN-GIQAMVEFESVHCAQKAKAALNGADI-------YAGCCTLKI 195
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL 110
Y+ T L+V + S DYT PYL
Sbjct: 196 EYARPTRLNVIKNDNESWDYTKPYL 220
>gi|156378504|ref|XP_001631182.1| predicted protein [Nematostella vectensis]
gi|156218218|gb|EDO39119.1| predicted protein [Nematostella vectensis]
Length = 513
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Query: 120 SGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQA 179
S Q+S + + + +LL +I N QY VT D+LH +FS G VQ+I +F K+ GLQA
Sbjct: 123 SKQISRNVHVRSETQPNKILLITIINPQYVVTTDILHTIFSKQGMVQRIVIFRKS-GLQA 181
Query: 180 LIQ---YPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPST 236
+++ + V+ A AKE L G IY G S L+++ N+ + DYT
Sbjct: 182 MVEESRFDCVEAARHAKETLNGADIYTGCNTLKIESQGYAQQLNVRKNDSETYDYTQDKG 241
Query: 237 P 237
P
Sbjct: 242 P 242
>gi|313237439|emb|CBY12627.1| unnamed protein product [Oikopleura dioica]
Length = 873
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 2/106 (1%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
D K P +VLL +I + Y +T +L + S GPV +I +F K +QA+I++ +
Sbjct: 691 DSKNPNPPGHVLLLTILDAMYPITTKLLERICSYAGPVLRIVIFRKK-SVQAMIEFDSIV 749
Query: 188 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 233
A AK AL G IY G C + + Y++ L++ N+D +RD+++
Sbjct: 750 GAQRAKAALNGVDIYR-GCCTIKVEYAKPQSLNVFKNDDNTRDFSV 794
>gi|146197853|dbj|BAF57638.1| hnRNP L protein [Dugesia japonica]
Length = 543
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN---GGLQALIQYPDVQTAVVA 192
+ VL I N Y++T+DVL+ + S +G V +I + KN ++ALI++ A +
Sbjct: 79 TKVLHFLITNAVYSITVDVLNKICSPYGKVARIYIGKKNDQDNSIEALIEFSTDNDAKIV 138
Query: 193 KEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL-PSTPMV 239
KE L+G+ IY G C L +SYS+ + ++ N+ S DYTL P T ++
Sbjct: 139 KENLDGNDIY-SGCCSLKLSYSKIHKIHVEKNDSESFDYTLVPKTGLL 185
>gi|431909696|gb|ELK12854.1| Heterogeneous nuclear ribonucleoprotein L [Pteropus alecto]
Length = 629
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 93/221 (42%), Gaps = 60/221 (27%)
Query: 109 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 166
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 160 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 219
Query: 167 KIAMFDKNGGLQALIQYP------------------------------------DVQTAV 190
+I +F KN G+QA+++YP V V
Sbjct: 220 RIVIFRKN-GVQAMVEYPLLGNGFLAAGALKAGRGATLSTSVYTGCLPCAKCLHSVMGEV 278
Query: 191 V-------AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS-----TPM 238
V AK +L G IY G C L I Y++ T L++ N+ + DYT P+ P
Sbjct: 279 VSKPSAQRAKASLNGADIYS-GCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNLSGQGDPG 337
Query: 239 VN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 271
N QP +LG P G + Y+ + PPPP
Sbjct: 338 SNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 378
>gi|71983992|ref|NP_495411.2| Protein C44B7.2, isoform a [Caenorhabditis elegans]
gi|351065573|emb|CCD61555.1| Protein C44B7.2, isoform a [Caenorhabditis elegans]
Length = 597
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VL+ ++ N QY + DV++ + +A G V ++A+ K +QAL+++ ++ A AK A
Sbjct: 120 NKVLVVTVLNAQYPIDADVIYQISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAAKHA 179
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPST 236
+ G IY G C L + +++ + ++ + RD+TLP
Sbjct: 180 MNGADIY-SGCCTLKVEFAKPDRVRVQRQDKDQRDFTLPDN 219
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+ +A G V ++ K QALV+F E A +AK+A++G I G CTL++
Sbjct: 142 ISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAAKHAMNGADI-------YSGCCTLKV 194
Query: 86 TYSAHTDLSVKFQSHRSRDYTNP 108
++ + V+ Q RD+T P
Sbjct: 195 EFAKPDRVRVQRQDKDQRDFTLP 217
>gi|7497376|pir||T15805 hypothetical protein C44B7.2 - Caenorhabditis elegans
Length = 493
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VL+ ++ N QY + DV++ + +A G V ++A+ K +QAL+++ ++ A AK A
Sbjct: 123 NKVLVVTVLNAQYPIDADVIYQISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAAKHA 182
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPST 236
+ G IY G C L + +++ + ++ + RD+TLP
Sbjct: 183 MNGADIY-SGCCTLKVEFAKPDRVRVQRQDKDQRDFTLPDN 222
Score = 44.3 bits (103), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+ +A G V ++ K QALV+F E A +AK+A++G I G CTL++
Sbjct: 145 ISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAAKHAMNGADI-------YSGCCTLKV 197
Query: 86 TYSAHTDLSVKFQSHRSRDYTNP 108
++ + V+ Q RD+T P
Sbjct: 198 EFAKPDRVRVQRQDKDQRDFTLP 220
>gi|47209150|emb|CAF89890.1| unnamed protein product [Tetraodon nigroviridis]
Length = 569
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 80/178 (44%), Gaps = 29/178 (16%)
Query: 30 FGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR----- 84
FG V K+ T + A Q ++ + E A + N P T+R
Sbjct: 31 FGRVSKLITLK--AKNQGFLEMASEEAAITMMNYYTS------------APPTIRNQPVF 76
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPY--LPVAPSAIDASGQLSVGLDGKK-LEPESNVLLA 141
I YS H +L ++ + TN L +A SG ++ G DG+ + +S VL
Sbjct: 77 IQYSTHREL-------KTDNLTNQRAALQAISTASMHSGSMAAGGDGRGGVHAQSPVLRI 129
Query: 142 SIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 199
+EN+ Y V+L+VL +FS FG V KI F +N QAL+Q+ D A AK H
Sbjct: 130 IVENLFYPVSLEVLQQIFSKFGSVLKIITFTRNNQFQALLQFSDAVHAQHAKAVSHTH 187
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 32/61 (52%), Gaps = 13/61 (21%)
Query: 1 MFYICRPLSRKYLQWQLSASGERAHVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSA 60
+FY P+S + LQ +FS FG V KI TF + FQAL+QFSD A A
Sbjct: 134 LFY---PVSLEVLQ----------QIFSKFGSVLKIITFTRNNQFQALLQFSDAVHAQHA 180
Query: 61 K 61
K
Sbjct: 181 K 181
>gi|324503755|gb|ADY41626.1| Heterogeneous nuclear ribonucleoprotein L, partial [Ascaris suum]
Length = 614
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + E ++VL+ +I N QY VT+DV+H + G V++IAM + LQAL+++
Sbjct: 106 GLESEHPNHVLILTIYNAQYPVTVDVIHQICEPHGFVKRIAMI-RRTMLQALVEFESADV 164
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 232
A AK A+ G IY G C L + +++ + + N+ DYT
Sbjct: 165 AKKAKHAMNGADIY-SGCCTLKVEFAKPDHVKVTRNDQDQWDYT 207
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
GFV +I +T QALV+F + A AK+A++G I G CTL++ ++
Sbjct: 140 GFVKRIAMIRRTM-LQALVEFESADVAKKAKHAMNGADI-------YSGCCTLKVEFAKP 191
Query: 91 TDLSVKFQSHRSRDYT 106
+ V DYT
Sbjct: 192 DHVKVTRNDQDQWDYT 207
>gi|324504296|gb|ADY41855.1| Heterogeneous nuclear ribonucleoprotein L, partial [Ascaris suum]
Length = 626
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Query: 132 LEPE--SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTA 189
LE E ++VL+ +I N QY VT+DV+H + G V++IAM + LQAL+++ A
Sbjct: 107 LESEHPNHVLILTIYNAQYPVTVDVIHQICEPHGFVKRIAMI-RRTMLQALVEFESADVA 165
Query: 190 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 232
AK A+ G IY G C L + +++ + + N+ DYT
Sbjct: 166 KKAKHAMNGADIY-SGCCTLKVEFAKPDHVKVTRNDQDQWDYT 207
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
GFV +I +T QALV+F + A AK+A++G I G CTL++ ++
Sbjct: 140 GFVKRIAMIRRTM-LQALVEFESADVAKKAKHAMNGADI-------YSGCCTLKVEFAKP 191
Query: 91 TDLSVKFQSHRSRDYT 106
+ V DYT
Sbjct: 192 DHVKVTRNDQDQWDYT 207
>gi|410931471|ref|XP_003979119.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like, partial
[Takifugu rubripes]
Length = 182
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T DVL+ V + G V +I +F +N G+QA++++ V A AK A
Sbjct: 105 NKVLLLSIQNPLYPITTDVLYTVCNPIGNVLRIVIFKRN-GIQAMVEFESVHCAQKAKAA 163
Query: 196 LEGHCIYDGGFCKLHISYSR 215
L G IY G C L I Y+R
Sbjct: 164 LNGADIY-AGCCTLKIEYAR 182
>gi|386768315|ref|NP_725913.2| smooth, isoform P [Drosophila melanogaster]
gi|383302600|gb|AAM68420.2| smooth, isoform P [Drosophila melanogaster]
Length = 434
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 68/142 (47%), Gaps = 20/142 (14%)
Query: 144 ENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYD 203
EN + DVLH + G V +I +F KNG +QA++++ ++ A A+E L G IY
Sbjct: 42 ENDVHMHARDVLHKICHPHGQVLRIVIFKKNG-VQAMVEFDNLDAATRARENLNGADIY- 99
Query: 204 GGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYN 262
G C L I Y++ L++ N D S DYTL ST + +P +LG
Sbjct: 100 AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTL-STGEILPKPPLLGP-------------- 144
Query: 263 GAQFAPPPPEQPMMHQPTAAGW 284
GA F PP P H T W
Sbjct: 145 GAAF--PPFGAPEYHTTTPENW 164
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 61 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 112
Query: 91 TDLSV-KFQSHRSRDYT 106
L+V K + S DYT
Sbjct: 113 EKLNVYKNEPDTSWDYT 129
>gi|268530642|ref|XP_002630447.1| Hypothetical protein CBG11180 [Caenorhabditis briggsae]
Length = 604
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VL+ ++ N Y + DV+H + S+ G V ++A+ K +QAL+++ V+ A AK A
Sbjct: 122 NKVLVVTVLNATYPIDADVIHTISSSQGKVLRVAVMHKPTVVQALVEFESVEVAKAAKHA 181
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 233
+ G IY G C L + +++ + + + RD+TL
Sbjct: 182 MNGADIY-AGCCTLKVEFAKPDRVRVTRQDKDQRDFTL 218
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+ S+ G V ++ K QALV+F E A +AK+A++G I G CTL++
Sbjct: 144 ISSSQGKVLRVAVMHKPTVVQALVEFESVEVAKAAKHAMNGADI-------YAGCCTLKV 196
Query: 86 TYSAHTDLSVKFQSHRSRDYT 106
++ + V Q RD+T
Sbjct: 197 EFAKPDRVRVTRQDKDQRDFT 217
>gi|17532395|ref|NP_495412.1| Protein C44B7.2, isoform b [Caenorhabditis elegans]
gi|351065574|emb|CCD61556.1| Protein C44B7.2, isoform b [Caenorhabditis elegans]
Length = 339
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VL+ ++ N QY + DV++ + +A G V ++A+ K +QAL+++ ++ A AK A
Sbjct: 120 NKVLVVTVLNAQYPIDADVIYQISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAAKHA 179
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPST 236
+ G IY G C L + +++ + ++ + RD+TLP
Sbjct: 180 MNGADIY-SGCCTLKVEFAKPDRVRVQRQDKDQRDFTLPDN 219
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+ +A G V ++ K QALV+F E A +AK+A++G I G CTL++
Sbjct: 142 ISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAAKHAMNGADI-------YSGCCTLKV 194
Query: 86 TYSAHTDLSVKFQSHRSRDYTNP 108
++ + V+ Q RD+T P
Sbjct: 195 EFAKPDRVRVQRQDKDQRDFTLP 217
>gi|302789994|ref|XP_002976765.1| hypothetical protein SELMODRAFT_443293 [Selaginella moellendorffii]
gi|300155803|gb|EFJ22434.1| hypothetical protein SELMODRAFT_443293 [Selaginella moellendorffii]
Length = 451
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
S VLLA I N Y + +D+LH VFS G ++KI +F K +QA I + + A AK A
Sbjct: 139 SRVLLAIIHNPLYQMNVDILHQVFSPHGNIEKIVIFHK-AAVQAFIVFESDEAAAAAKSA 197
Query: 196 LEGHCIYDGGFCKLHISYS 214
L+G I+DG CKL I +S
Sbjct: 198 LQGRQIFDGC-CKLDIKFS 215
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 99/240 (41%), Gaps = 58/240 (24%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
VFS G + KI F K A QA + F E A++AK+AL GR I G C L
Sbjct: 160 QVFSPHGNIEKIVIFHK-AAVQAFIVFESDEAAAAAKSALQGRQIFD-------GCCKLD 211
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP------VAPSA----------------IDASGQ 122
I +S DYTN LP +P A + SG
Sbjct: 212 IKFSM--------------DYTNNSLPGDSQSKTSPQASILGAGTAFSTMKQGSVPLSGV 257
Query: 123 LSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQ 182
L G+ G + LL S N+ + L +FS +G V +I MF+ QAL+Q
Sbjct: 258 LPFGVTGSN---DKCTLLVS--NLHERTDEEKLFNLFSGYGRVLRIKMFE--NAKQALVQ 310
Query: 183 YPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ 242
D A +A L+G + + IS+S+H + + R+RD+T+ NS+
Sbjct: 311 LADGIQAELALNFLKGAPLLGSA---MEISFSKHN----TIRHPRTRDFTMDPYNRFNSE 363
>gi|170582502|ref|XP_001896158.1| hypothetical protein [Brugia malayi]
gi|158596691|gb|EDP34993.1| conserved hypothetical protein [Brugia malayi]
Length = 643
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Query: 132 LEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTA 189
LE E+ +VL+ +I N QY + +DV+H + G V++IAM + LQAL+++ + A
Sbjct: 532 LESETPNHVLILTIYNAQYPINVDVIHQICELHGFVRRIAMI-RRTMLQALVEFESAEIA 590
Query: 190 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 232
AK A+ G IY G C L + +++ + + N+ DYT
Sbjct: 591 KKAKHAMNGADIY-SGCCTLKVEFAKPEHVKVTRNDSDQWDYT 632
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
GFV +I +T QALV+F E A AK+A++G I G CTL++ ++
Sbjct: 565 GFVRRIAMIRRTM-LQALVEFESAEIAKKAKHAMNGADIYS-------GCCTLKVEFAKP 616
Query: 91 TDLSVKFQSHRSRDYT 106
+ V DYT
Sbjct: 617 EHVKVTRNDSDQWDYT 632
>gi|358332176|dbj|GAA36554.2| polypyrimidine tract-binding protein 1 [Clonorchis sinensis]
Length = 543
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 92 DLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAV 150
++ ++F +H + T + + +A+ + L G + ++VL I+N M +
Sbjct: 76 NIILQFSTHTHLELTTENNAIENAVKNANRIVQQDLSGVQAGAPNSVLRIVIDNIMGQQI 135
Query: 151 TLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 210
+L+ +F FG + ++ +F ++ Q ++++ + A VA L G IY G C L
Sbjct: 136 NHVILYKIFHRFGKILRVLIFLRSNQYQCMLEFQNHIQAFVAMLHLNGQNIYTGC-CSLR 194
Query: 211 ISYSRHTD-LSIKVNNDRSRDYTLPSTPM----VNSQPSILGQQPVPMVGATANQYNGAQ 265
+ +SR L ++ ND+ RDYT+ +P+ +NS P PV + ATAN
Sbjct: 195 VEFSRTRGPLEVRRENDKCRDYTV--SPLLEDELNSPPP--ANVPVNQLAATAN------ 244
Query: 266 FAPPPPEQ------PMMHQPTAAGWGAVPPASQ 292
F P Q PM + P GAVP ++
Sbjct: 245 FQPNMIGQNLAVVNPMTNIPGMGTAGAVPGITE 277
>gi|290975622|ref|XP_002670541.1| predicted protein [Naegleria gruberi]
gi|284084101|gb|EFC37797.1| predicted protein [Naegleria gruberi]
Length = 918
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 105/247 (42%), Gaps = 49/247 (19%)
Query: 41 KTAGFQALVQFSDTETASSAKNALDGRSIP--------RYLLPENMGPCTLRITYSAHTD 92
K G+ A V+F E A + +G+ I ++ + + +T + + D
Sbjct: 260 KRDGYLAFVEFESVEKAQMFLDKFEGQKIKIRNRTAYLKFSEKQQLEGTPGGLTMNVNED 319
Query: 93 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTL 152
L+ +PV+ + ++ + + ++ + Y + +
Sbjct: 320 LNT--------------VPVSKTVVNTNNATII-----------HITFTHCDEYNYPLNV 354
Query: 153 DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY-DGGFCKLHI 211
D+L +FS FG ++KI +F KN Q+L+Q+ A A + +EG +Y + +++I
Sbjct: 355 DLLFNLFSKFGTIEKINIFIKNELTQSLVQFKSDTEATEAVKEMEGVFVYPEMKLYRMNI 414
Query: 212 SYSRHT--DLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGA----Q 265
+S+ + +L IK N R+RDY + PM Q+P G++ N
Sbjct: 415 QFSKKSREELLIKETNHRNRDYVV--HPM-------RSQKPYDGSGSSMRYNNNTPSNNH 465
Query: 266 FAPPPPE 272
+APPP +
Sbjct: 466 YAPPPED 472
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQF-SDTETASSAKNALDGRSIPRYLLPE-NMGPCT 82
++FS FG + KI F K Q+LVQF SDTE A+ A ++G ++ PE +
Sbjct: 359 NLFSKFGTIEKINIFIKNELTQSLVQFKSDTE-ATEAVKEMEG----VFVYPEMKLYRMN 413
Query: 83 LRITYSAHTDLSVKFQSHRSRDY 105
++ + + +L +K +HR+RDY
Sbjct: 414 IQFSKKSREELLIKETNHRNRDY 436
>gi|170576159|ref|XP_001893522.1| RNA binding protein [Brugia malayi]
gi|158600425|gb|EDP37644.1| RNA binding protein, putative [Brugia malayi]
Length = 659
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + E ++VL+ +I N QY + +DV+H + G V++IAM + LQAL+++ +
Sbjct: 116 GLESETPNHVLILTIYNAQYPINVDVIHQICELHGFVRRIAMI-RRTMLQALVEFESAEI 174
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 232
A AK A+ G IY G C L + +++ + + N+ DYT
Sbjct: 175 AKKAKHAMNGADIY-SGCCTLKVEFAKPEHVKVTRNDSDQWDYT 217
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
GFV +I +T QALV+F E A AK+A++G I G CTL++ ++
Sbjct: 150 GFVRRIAMIRRTM-LQALVEFESAEIAKKAKHAMNGADIYS-------GCCTLKVEFAKP 201
Query: 91 TDLSVKFQSHRSRDYT 106
+ V DYT
Sbjct: 202 EHVKVTRNDSDQWDYT 217
>gi|402594034|gb|EJW87961.1| hypothetical protein WUBG_01127 [Wuchereria bancrofti]
Length = 608
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + E ++VL+ +I N QY + +DV+H + G V++IAM + LQAL+++ +
Sbjct: 116 GLESETPNHVLILTIYNAQYPINVDVIHQICELHGFVRRIAMI-RRTMLQALVEFESAEI 174
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 232
A AK A+ G IY G C L + +++ + + N+ DYT
Sbjct: 175 AKKAKHAMNGADIY-SGCCTLKVEFAKPEHVKVTRNDSDQWDYT 217
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
GFV +I +T QALV+F E A AK+A++G I G CTL++ ++
Sbjct: 150 GFVRRIAMIRRTM-LQALVEFESAEIAKKAKHAMNGADIYS-------GCCTLKVEFAKP 201
Query: 91 TDLSVKFQSHRSRDYT 106
+ V DYT
Sbjct: 202 EHVKVTRNDSDQWDYT 217
>gi|393907053|gb|EJD74501.1| serologically defined colon cancer antigen 1 [Loa loa]
Length = 1568
Score = 60.8 bits (146), Expect = 9e-07, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + E ++VL+ +I N QY + +DV+H + G V++IAM + LQAL+++ +
Sbjct: 1044 GLESESPNHVLILTIYNAQYPINVDVIHQICELHGFVKRIAMIRRT-MLQALVEFESAEI 1102
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 232
A AK A+ G IY G C L + +++ + + N++ DYT
Sbjct: 1103 AKKAKHAMNGADIYS-GCCTLKVEFAKPEHVKVTRNDNDQWDYT 1145
Score = 40.4 bits (93), Expect = 1.2, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
GFV +I +T QALV+F E A AK+A++G I G CTL++ ++
Sbjct: 1078 GFVKRIAMIRRTM-LQALVEFESAEIAKKAKHAMNGADI-------YSGCCTLKVEFAKP 1129
Query: 91 TDLSVKFQSHRSRDYT 106
+ V + DYT
Sbjct: 1130 EHVKVTRNDNDQWDYT 1145
>gi|74193172|dbj|BAE20599.1| unnamed protein product [Mus musculus]
gi|74193487|dbj|BAE20681.1| unnamed protein product [Mus musculus]
gi|74193495|dbj|BAE20685.1| unnamed protein product [Mus musculus]
Length = 241
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP------ESNV 138
I YS H +L ++ + N V A+ A + L G + +S V
Sbjct: 128 IQYSNHKEL-------KTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPV 180
Query: 139 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD 185
L I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D
Sbjct: 181 LRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGD 227
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 22/37 (59%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAK 61
+FS FG V KI TF K FQAL+Q+ D A AK
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAK 235
>gi|324510343|gb|ADY44324.1| Heterogeneous nuclear ribonucleoprotein L [Ascaris suum]
Length = 400
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 2/120 (1%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + E S VL+ ++ N+ + ++V+ + + +G V++IAM + G+QAL+++ D+Q
Sbjct: 19 GLETEHASRVLILTVYNVCQPIDINVIFQICAPYGVVKRIAMLHR-FGVQALVEFDDMQM 77
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 248
A AK + G IY G C L + +++ +++ N DYT TP P + Q
Sbjct: 78 AKNAKRGINGADIYHGC-CTLKVEFAKPDHVNVTANTSMQWDYTTGLTPGFIDYPHTIQQ 136
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 18/111 (16%)
Query: 1 MFYICRPLSRKYLQWQLSASGERAHVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSA 60
++ +C+P+ + +Q+ A +G V +I + G QALV+F D + A +A
Sbjct: 33 VYNVCQPIDINVI-FQICA---------PYGVVKRIAMLHRF-GVQALVEFDDMQMAKNA 81
Query: 61 KNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 111
K ++G I G CTL++ ++ ++V + DYT P
Sbjct: 82 KRGINGADIYH-------GCCTLKVEFAKPDHVNVTANTSMQWDYTTGLTP 125
>gi|149025820|gb|EDL82063.1| polypyrimidine tract binding protein 2, isoform CRA_c [Rattus
norvegicus]
Length = 243
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP------ESNV 138
I YS H +L ++ + N V A+ A + L G + +S V
Sbjct: 128 IQYSNHKEL-------KTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPV 180
Query: 139 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD 185
L I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D
Sbjct: 181 LRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGD 227
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 22/37 (59%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAK 61
+FS FG V KI TF K FQAL+Q+ D A AK
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAK 235
>gi|145478107|ref|XP_001425076.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392144|emb|CAK57678.1| unnamed protein product [Paramecium tetraurelia]
Length = 361
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 133 EPESNVLLASIENMQYAVTLD--VLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAV 190
+P + +LL + ++ + TL+ +H F+ FG + KI +F+K +A +++ ++ +A+
Sbjct: 7 DPPNKILLLILNSLPSSFTLNNQFIHQKFNQFGDINKILIFEKGKTTKAFVEFHELNSAI 66
Query: 191 VAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQP 250
AK+ L G C GG +H S ++ +L I V+N R DYT S+ NS + +
Sbjct: 67 QAKKQLNG-CNIQGGKMNIHFSRLKNLNLEI-VDNSRGTDYTQASSNSQNSDSMLNSRTE 124
Query: 251 VPMVGATANQYNGAQ-----FAPPPPEQPMMHQPTAAGWGAVPPASQSMPM 296
+ N + Q +P EQ ++ G + Q+MP+
Sbjct: 125 ENIQFDLTNHISSTQSPRANSSPIRNEQINRLLESSDGEDDLKIWKQTMPL 175
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 90/234 (38%), Gaps = 67/234 (28%)
Query: 27 FSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRIT 86
F+ FG ++KI FEK +A V+F + +A AK L+G N+ + I
Sbjct: 35 FNQFGDINKILIFEKGKTTKAFVEFHELNSAIQAKKQLNGC---------NIQGGKMNIH 85
Query: 87 YSAHTDLSVKF-QSHRSRDYT--------------------------------------- 106
+S +L+++ + R DYT
Sbjct: 86 FSRLKNLNLEIVDNSRGTDYTQASSNSQNSDSMLNSRTEENIQFDLTNHISSTQSPRANS 145
Query: 107 ----NPYLPVAPSAIDASGQLSVG-----LDGKKLEPESNVLLA-------SIENMQYAV 150
N + + D L + LD ++ PE LL I N +
Sbjct: 146 SPIRNEQINRLLESSDGEDDLKIWKQTMPLDIEEFHPEIQKLLQQRQSRLLKILNFDSKI 205
Query: 151 TLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 204
T +++ VFS FG +++I +++K+ +A I+Y V A++AKE L +D
Sbjct: 206 TAKMIYNVFSKFGNLEEI-LYEKSSS-RAYIKYQSVNQAIIAKEYLNNIQFFDS 257
>gi|298707512|emb|CBJ30114.1| human PTB (hnRNP) homolog family member (ptb-1) [Ectocarpus
siliculosus]
Length = 921
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 137 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 196
NVLL + ++ + VT+ L +FS FG V KI MFDK G QAL+Q +V TA+ A EA
Sbjct: 87 NVLLVRVTDIVHPVTILALQQIFSRFGKVDKIVMFDKGSGSQALVQMANVHTAMSAHEAA 146
Query: 197 E 197
+
Sbjct: 147 D 147
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLP 75
+FS FG V KI F+K +G QALVQ ++ TA SA A D +S P +P
Sbjct: 107 QIFSRFGKVDKIVMFDKGSGSQALVQMANVHTAMSAHEAADMQSGPYGSIP 157
>gi|296489304|tpg|DAA31417.1| TPA: polypyrimidine tract binding protein 2-like [Bos taurus]
Length = 496
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 37/59 (62%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 193
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 146 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAK 204
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 31/213 (14%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLL---------- 74
+FS FG V KI TF K FQAL+Q+ D A AK L+ ++ ++L+
Sbjct: 168 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAK--LEKKNDHQWLMAAAEATPKAD 225
Query: 75 -----PENMGPCTLRITYS-AHTDLSVKFQSHRSRDYTNPYLP--VAPSAI-------DA 119
+ R+ Y+ T + +++ S+ +P ++P AI A
Sbjct: 226 FTLRRERFISSSWFRVLYTFRETSPVMNYRNDPSKYSLEKTVPGALSPLAIPNAAAAAAA 285
Query: 120 SGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQA 179
+ VG+ G + +L++++ + VT L +F +G VQ++ + N A
Sbjct: 286 AAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDVQRVKIL-YNKKDSA 342
Query: 180 LIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 212
LIQ D + +A L G +Y G ++ +S
Sbjct: 343 LIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 374
>gi|324504331|gb|ADY41870.1| Heterogeneous nuclear ribonucleoprotein L [Ascaris suum]
Length = 536
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + E S VL+ ++ N+ + ++V+ + + +G V++IAM + G+QAL+++ D+Q
Sbjct: 153 GLETEHASRVLILTVYNVCQPIDINVIFQICAPYGVVKRIAMLHR-FGVQALVEFDDMQM 211
Query: 189 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
A AK + G IY G C L + +++ +++ N DYT TP
Sbjct: 212 AKNAKRGINGADIYHGC-CTLKVEFAKPDHVNVTANTSMQWDYTTGLTP 259
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 30 FGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSA 89
+G V +I + G QALV+F D + A +AK ++G I G CTL++ ++
Sbjct: 186 YGVVKRIAMLHR-FGVQALVEFDDMQMAKNAKRGINGADIYH-------GCCTLKVEFAK 237
Query: 90 HTDLSVKFQSHRSRDYTNPYLP 111
++V + DYT P
Sbjct: 238 PDHVNVTANTSMQWDYTTGLTP 259
>gi|158519869|ref|NP_001103551.1| polypyrimidine tract-binding protein 2 [Bos taurus]
gi|158455056|gb|AAI22581.1| PTBP2 protein [Bos taurus]
Length = 255
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 34/51 (66%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD 185
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGD 227
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 22/37 (59%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAK 61
+FS FG V KI TF K FQAL+Q+ D A AK
Sbjct: 199 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAK 235
>gi|344255742|gb|EGW11846.1| Polypyrimidine tract-binding protein 2 [Cricetulus griseus]
Length = 212
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 34/51 (66%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD 185
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D
Sbjct: 146 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGD 196
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 22/37 (59%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAK 61
+FS FG V KI TF K FQAL+Q+ D A AK
Sbjct: 168 QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAK 204
>gi|148700268|gb|EDL32215.1| mCG50057 [Mus musculus]
Length = 253
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 43/70 (61%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 188
G + +S L +EN+ Y VTLD++H +FS FG V KI F KN QAL+QY D +
Sbjct: 184 GMAMAGQSPALRIIVENLFYPVTLDMVHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 243
Query: 189 AVVAKEALEG 198
A AK +L+G
Sbjct: 244 AQHAKLSLDG 253
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG 66
+FS FG V KI TF K FQAL+Q++D +A AK +LDG
Sbjct: 212 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDG 253
>gi|256076159|ref|XP_002574381.1| polypyrimidine tract binding protein [Schistosoma mansoni]
Length = 639
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 6/203 (2%)
Query: 93 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 151
L +F +H + + + + +A+ + L G + + VL I+N M +
Sbjct: 157 LIFQFSTHSHLELISENDAIVNAIKNANRVVQQDLPGAQTGVPNTVLHVVIDNIMGQQIN 216
Query: 152 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 211
+L+ +F FG + ++ +F +N + L+++ + A VA L G IY G C L +
Sbjct: 217 HVILYKIFHRFGTILRVLIFLRNNQYRCLLEFQNHIQAFVAMLLLNGQNIYTGC-CSLQV 275
Query: 212 SYSRHTD-LSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPP 270
+ + L ++ ND+ RDYT+ +P+ + + + L P + +T N + P
Sbjct: 276 EFWKARGPLEVRRENDKCRDYTI--SPLTDDELNSLQALPGGVTASTNNSTINSISQPSI 333
Query: 271 PEQPMMHQPTAAGWGAVPPASQS 293
+ + PTAA + AVP A+ S
Sbjct: 334 GQNIPLGNPTAA-FTAVPQAAAS 355
>gi|256076161|ref|XP_002574382.1| polypyrimidine tract binding protein [Schistosoma mansoni]
Length = 463
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 6/203 (2%)
Query: 93 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 151
L +F +H + + + + +A+ + L G + + VL I+N M +
Sbjct: 157 LIFQFSTHSHLELISENDAIVNAIKNANRVVQQDLPGAQTGVPNTVLHVVIDNIMGQQIN 216
Query: 152 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 211
+L+ +F FG + ++ +F +N + L+++ + A VA L G IY G C L +
Sbjct: 217 HVILYKIFHRFGTILRVLIFLRNNQYRCLLEFQNHIQAFVAMLLLNGQNIYTG-CCSLQV 275
Query: 212 SYSRHTD-LSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPP 270
+ + L ++ ND+ RDYT+ +P+ + + + L P + +T N + P
Sbjct: 276 EFWKARGPLEVRRENDKCRDYTI--SPLTDDELNSLQALPGGVTASTNNSTINSISQPSI 333
Query: 271 PEQPMMHQPTAAGWGAVPPASQS 293
+ + PTAA + AVP A+ S
Sbjct: 334 GQNIPLGNPTAA-FTAVPQAAAS 355
>gi|350644875|emb|CCD60411.1| polypyrimidine tract binding protein, putative [Schistosoma
mansoni]
Length = 592
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 6/203 (2%)
Query: 93 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 151
L +F +H + + + + +A+ + L G + + VL I+N M +
Sbjct: 121 LIFQFSTHSHLELISENDAIVNAIKNANRVVQQDLPGAQTGVPNTVLHVVIDNIMGQQIN 180
Query: 152 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 211
+L+ +F FG + ++ +F +N + L+++ + A VA L G IY G C L +
Sbjct: 181 HVILYKIFHRFGTILRVLIFLRNNQYRCLLEFQNHIQAFVAMLLLNGQNIYTGC-CSLQV 239
Query: 212 SYSRHTD-LSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPP 270
+ + L ++ ND+ RDYT+ +P+ + + + L P + +T N + P
Sbjct: 240 EFWKARGPLEVRRENDKCRDYTI--SPLTDDELNSLQALPGGVTASTNNSTINSISQPSI 297
Query: 271 PEQPMMHQPTAAGWGAVPPASQS 293
+ + PTAA + AVP A+ S
Sbjct: 298 GQNIPLGNPTAA-FTAVPQAAAS 319
>gi|350644874|emb|CCD60410.1| polypyrimidine tract binding protein, putative [Schistosoma
mansoni]
Length = 427
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 6/203 (2%)
Query: 93 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 151
L +F +H + + + + +A+ + L G + + VL I+N M +
Sbjct: 121 LIFQFSTHSHLELISENDAIVNAIKNANRVVQQDLPGAQTGVPNTVLHVVIDNIMGQQIN 180
Query: 152 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 211
+L+ +F FG + ++ +F +N + L+++ + A VA L G IY G C L +
Sbjct: 181 HVILYKIFHRFGTILRVLIFLRNNQYRCLLEFQNHIQAFVAMLLLNGQNIYTG-CCSLQV 239
Query: 212 SYSRHTD-LSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPP 270
+ + L ++ ND+ RDYT+ +P+ + + + L P + +T N + P
Sbjct: 240 EFWKARGPLEVRRENDKCRDYTI--SPLTDDELNSLQALPGGVTASTNNSTINSISQPSI 297
Query: 271 PEQPMMHQPTAAGWGAVPPASQS 293
+ + PTAA + AVP A+ S
Sbjct: 298 GQNIPLGNPTAA-FTAVPQAAAS 319
>gi|403370184|gb|EJY84954.1| Polypyrimidine tract binding protein, putative [Oxytricha
trifallax]
Length = 734
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VLL SI N++Y V DVL +F +G Q+I +F + G QAL+++ + A K
Sbjct: 418 DSKVLLVSITNIKYPVNADVLFTIFQKYGDPQRIVIFPRQQGEQALVEFQTFEQAKKVKL 477
Query: 195 ALEGHCIYDGGFCK----LHISYSRHTDLSIKVNNDRSRDYT 232
L+G +Y G + + I +S L I ++RD+T
Sbjct: 478 LLDGQGMY--GVSQPANVMKIQFSELQKLEINTQTLKARDFT 517
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+F +G +I F + G QALV+F E A K LDG+ + P N+ ++I
Sbjct: 441 IFQKYGDPQRIVIFPRQQGEQALVEFQTFEQAKKVKLLLDGQGMYGVSQPANV----MKI 496
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL-PVAPSAIDASGQLSVGLDG 129
+S L + Q+ ++RD+T + + ID G LS+ D
Sbjct: 497 QFSELQKLEINTQTLKARDFTKQTVGSFVQNQIDKQGDLSINKDD 541
>gi|226487296|emb|CAX75513.1| Polypyrimidine tract-binding protein 1 [Schistosoma japonicum]
Length = 571
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 6/203 (2%)
Query: 93 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 151
L +F +H + + + + +A+ + L G + + VL I+N M +
Sbjct: 89 LIFQFSTHSHLELISENDAIVNAIKNANRVVQQDLPGAQTGVPNTVLHVVIDNIMGQQIN 148
Query: 152 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 211
+L+ +F FG + ++ +F +N + L+++ D A VA L G IY G C L +
Sbjct: 149 HVILYKIFHRFGIILRVLIFLRNNQYRCLLEFQDHIQAFVAMLLLNGQNIYTGC-CSLQV 207
Query: 212 SYSRHTD-LSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPP 270
+ + L ++ ND+ RDYT+ +P+ ++ + L P + +T N P
Sbjct: 208 EFWKARGPLEVRRENDKCRDYTV--SPLTEAELNSLQALPSGVTASTNNSTINTIPQPTI 265
Query: 271 PEQPMMHQPTAAGWGAVPPASQS 293
+ + PT A + A+P AS S
Sbjct: 266 GQNISLGNPTTA-FTAIPQASAS 287
>gi|403358967|gb|EJY79143.1| Polypyrimidine tract binding protein, putative [Oxytricha
trifallax]
Length = 479
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
+S VLL SI N++Y V DVL +F +G Q+I +F + G QAL+++ + A K
Sbjct: 163 DSKVLLVSITNIKYPVNADVLFTIFQKYGDPQRIVIFPRQQGEQALVEFQTFEQAKKVKL 222
Query: 195 ALEGHCIYDGGFCK----LHISYSRHTDLSIKVNNDRSRDYT 232
L+G +Y G + + I +S L I ++RD+T
Sbjct: 223 LLDGQGMY--GVSQPANVMKIQFSELQKLEINTQTLKARDFT 262
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+F +G +I F + G QALV+F E A K LDG+ + P N+ ++I
Sbjct: 186 IFQKYGDPQRIVIFPRQQGEQALVEFQTFEQAKKVKLLLDGQGMYGVSQPANV----MKI 241
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYL-PVAPSAIDASGQLSVGLD 128
+S L + Q+ ++RD+T + + ID G LS+ D
Sbjct: 242 QFSELQKLEINTQTLKARDFTKQTVGSFVQNQIDKQGDLSINKD 285
>gi|226487300|emb|CAX75515.1| Polypyrimidine tract-binding protein 1 [Schistosoma japonicum]
gi|226487302|emb|CAX75516.1| Polypyrimidine tract-binding protein 1 [Schistosoma japonicum]
Length = 603
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 6/203 (2%)
Query: 93 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 151
L +F +H + + + + +A+ + L G + + VL I+N M +
Sbjct: 121 LIFQFSTHSHLELISENDAIVNAIKNANRVVQQDLPGAQTGVPNTVLHVVIDNIMGQQIN 180
Query: 152 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 211
+L+ +F FG + ++ +F +N + L+++ D A VA L G IY G C L +
Sbjct: 181 HVILYKIFHRFGIILRVLIFLRNNQYRCLLEFQDHIQAFVAMLLLNGQNIYTGC-CSLQV 239
Query: 212 SYSRHTD-LSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPP 270
+ + L ++ ND+ RDYT+ +P+ ++ + L P + +T N P
Sbjct: 240 EFWKARGPLEVRRENDKCRDYTV--SPLTEAELNSLQALPSGVSASTNNSTINTIPQPTI 297
Query: 271 PEQPMMHQPTAAGWGAVPPASQS 293
+ + PT A + A+P AS S
Sbjct: 298 GQNISLGNPTTA-FTAIPQASAS 319
>gi|82794317|ref|XP_728389.1| neural polypyrimidine tract binding protein [Plasmodium yoelii
yoelii 17XNL]
gi|23484718|gb|EAA19954.1| neural polypyrimidine tract binding protein [Plasmodium yoelii
yoelii]
Length = 387
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVVAKEALEGHCIYDG 204
MQY V +++++ +FS G V+KI K + QAL+Q ++ A A + L IYDG
Sbjct: 1 MQYPVDIELIYYLFSKCGIVEKIITISKKTSIFQALVQLESIEVAKEAIKTLHNRNIYDG 60
Query: 205 GFCK-LHISYSRHTDLSIKVNNDRSRDYTLPSTPMVN 240
C L I YS +L IK NN ++ DYT+ S P N
Sbjct: 61 --CNTLQIQYSFLKELIIKNNNSQAWDYTI-SNPQKN 94
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 104/232 (44%), Gaps = 41/232 (17%)
Query: 25 HVFSAFGFVHKITTF-EKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTL 83
++FS G V KI T +KT+ FQALVQ E A A L R+I G TL
Sbjct: 12 YLFSKCGIVEKIITISKKTSIFQALVQLESIEVAKEAIKTLHNRNIYD-------GCNTL 64
Query: 84 RITYSAHTDLSVKFQSHRSRDYT--NP--------------YLPVAPSAIDASGQLS-VG 126
+I YS +L +K + ++ DYT NP LP P I + +G
Sbjct: 65 QIQYSFLKELIIKNNNSQAWDYTISNPQKNKNNFSFQMSHGVLPTPPRNIKETELYKLLG 124
Query: 127 LDGKKLEPESN------VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQAL 180
K ++ E+ VL+ +Y+ ++ L +FS +G V +I + + AL
Sbjct: 125 RKFKIVDFETKNASKTPVLICYNIPKEYS-DVNKLFNLFSIYGYVSRIKILREKPD-SAL 182
Query: 181 IQYPDVQTAVVAKEALEGHCIYDGGFCK--LHISYSRHTDLSIKVNNDRSRD 230
IQY + + +A+E C+ C+ L + +S+ D+ I D+SRD
Sbjct: 183 IQYSNYLFSSMAQE-----CLQHAKICQNILELHFSKIYDIKISY-QDKSRD 228
>gi|301777342|ref|XP_002924098.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like, partial
[Ailuropoda melanoleuca]
Length = 281
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 14/99 (14%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VLL SI+N Y +T+DVL+ V + G VQ++ MF+ V A AK A
Sbjct: 192 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQQL-MFE------------SVLCAQKAKAA 238
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 234
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 239 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 276
>gi|146197802|dbj|BAF57617.1| hnRNP L protein [Dugesia japonica]
Length = 537
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKN--GGLQALIQYPDVQTAVVAKEALEGHCIYD 203
+Y +T+D++ + FG + KI + KN ++ L+++ + A AKEAL G IY
Sbjct: 2 FKYPITVDIIKQICLKFGKLLKIFIGKKNQDNVVECLVEFEKISEAKAAKEALHGEDIY- 60
Query: 204 GGFCKLHISYSRHTDLSIKVNNDRSRDYT 232
G C L + YS+ +++ + N+D S D++
Sbjct: 61 SGCCSLDVKYSKMSNVPVFKNDDESWDFS 89
>gi|145496290|ref|XP_001434136.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124401259|emb|CAK66739.1| unnamed protein product [Paramecium tetraurelia]
Length = 358
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 61/100 (61%), Gaps = 5/100 (5%)
Query: 148 YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFC 207
+ +T + LH F+ FG ++KI +F++ +A ++Y ++++A+ A++ L G I G
Sbjct: 24 FPLTNEFLHKKFNEFGDIKKILIFERGKTNKAFVEYHNLKSAISARKQLNGLNIQGG--- 80
Query: 208 KLHISYSRHTDLSIK-VNNDRSRDYTLPSTPMVNSQPSIL 246
K+ I YSR +L+++ V+N R DYT S+ NS SIL
Sbjct: 81 KMIIHYSRLKNLNLEIVDNSRGTDYTQASSNSQNS-DSIL 119
>gi|375073695|gb|AFA34406.1| polypirimidine tract binding 2 protein, partial [Ostrea edulis]
Length = 142
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 143 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 202
+E++ Y V ++VL+ +FS FG V K+ +F KN QALIQ D A AK +L+G IY
Sbjct: 79 VEHLVYPVGIEVLYQIFSKFGKVLKMIIFTKNNSFQALIQMSDPVAANAAKLSLDGQNIY 138
Query: 203 DG 204
+G
Sbjct: 139 NG 140
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSI 69
+FS FG V K+ F K FQAL+Q SD A++AK +LDG++I
Sbjct: 93 QIFSKFGKVLKMIIFTKNNSFQALIQMSDPVAANAAKLSLDGQNI 137
>gi|195151588|ref|XP_002016721.1| GL11732 [Drosophila persimilis]
gi|194110568|gb|EDW32611.1| GL11732 [Drosophila persimilis]
Length = 102
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 153 DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 212
DVLH + G V +I +F KNG +QA++++ ++ A A+E L G IY G C L I
Sbjct: 1 DVLHKICHPHGQVLRIVIFKKNG-VQAMVEFDNLDAATRARENLNGADIY-AGCCTLKID 58
Query: 213 YSRHTDLSIKVNN-DRSRDYTLPSTPMVNS 241
Y++ L++ N D S DYTL + ++ S
Sbjct: 59 YAKPEKLNVYKNEPDTSWDYTLSTGEILPS 88
Score = 42.4 bits (98), Expect = 0.34, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 11 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 62
Query: 91 TDLSV-KFQSHRSRDYTNPYLPVAPSA 116
L+V K + S DYT + PSA
Sbjct: 63 EKLNVYKNEPDTSWDYTLSTGEILPSA 89
>gi|194755561|ref|XP_001960052.1| GF13175 [Drosophila ananassae]
gi|190621350|gb|EDV36874.1| GF13175 [Drosophila ananassae]
Length = 97
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 153 DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 212
DVLH + G V +I +F KNG +QA++++ ++ A A+E L G IY G C L I
Sbjct: 1 DVLHKICHPHGQVLRIVIFKKNG-VQAMVEFDNLDAATRARENLNGADIY-AGCCTLKID 58
Query: 213 YSRHTDLSIKVNN-DRSRDYTLPSTPMVNS 241
Y++ L++ N D S DYTL + ++ S
Sbjct: 59 YAKPEKLNVYKNEPDTSWDYTLSTGEILPS 88
Score = 42.4 bits (98), Expect = 0.34, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 31 GFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAH 90
G V +I F+K G QA+V+F + + A+ A+ L+G I G CTL+I Y+
Sbjct: 11 GQVLRIVIFKKN-GVQAMVEFDNLDAATRARENLNGADI-------YAGCCTLKIDYAKP 62
Query: 91 TDLSV-KFQSHRSRDYTNPYLPVAPSA 116
L+V K + S DYT + PSA
Sbjct: 63 EKLNVYKNEPDTSWDYTLSTGEILPSA 89
>gi|47218405|emb|CAG12676.1| unnamed protein product [Tetraodon nigroviridis]
Length = 582
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 83/207 (40%), Gaps = 52/207 (25%)
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIE 144
I YS H +L + R++ A SA+ + G S + S VL I+
Sbjct: 140 IQYSNHKELKTDAGNQRTQAVLQ-----AVSAVQSGGSPSSDVQEALAAASSPVLRIIID 194
Query: 145 NMQYAVTLDVLHMVF-------SAFGPVQKIAMFDKNGGL-------------------- 177
NM Y VTLDVL V S V K +F +
Sbjct: 195 NMFYPVTLDVLQQVAFPHPLPPSVGRSVSKSGLFLGSSDFLQVRHSHEDNHLHQEQSVPG 254
Query: 178 QALIQYPDVQTA----------VVAK---------EALEGHCIYDGGFCKLHISYSRHTD 218
+ +Q P + A V+A +AL+G IY+ C L I +S+ +
Sbjct: 255 SSAVQRPRQRAAGQTGKALPPGVLAACSGLTFIHLQALDGQNIYNS-CCTLRIDFSKLVN 313
Query: 219 LSIKVNNDRSRDYTLPSTPMVNSQPSI 245
L++K NND+SRDYT P P + QPS+
Sbjct: 314 LNVKYNNDKSRDYTRPELPAGDGQPSL 340
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 81/190 (42%), Gaps = 43/190 (22%)
Query: 63 ALDGRSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA-------PS 115
ALDG++I CTLRI +S +L+VK+ + +SRDYT P LP P+
Sbjct: 291 ALDGQNIYNSC-------CTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPSLDPA 343
Query: 116 AIDASGQLSVGLDGK---KLEPES---------------------NVLLASIENMQYAVT 151
A + S L GK L P S VLL S N + VT
Sbjct: 344 VAAAFSKDSNSLLGKIPGALTPLSAAAAAAAAAGRVALAGQAGSGGVLLVSNLNEEM-VT 402
Query: 152 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 211
L +F +G VQ++ + N ALIQ D A +A L G +Y + +
Sbjct: 403 PQSLFTLFGVYGDVQRVKIL-YNKKDSALIQMSDANQAQLAMSHLNGQKMYGK---IIRV 458
Query: 212 SYSRHTDLSI 221
+ S+H +++
Sbjct: 459 TLSKHQSVAL 468
>gi|449687307|ref|XP_002155274.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Hydra
magnipapillata]
Length = 759
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 38/204 (18%)
Query: 30 FGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSA 89
FG + +T K QALV++ + E+A + + P +L M + YS
Sbjct: 165 FGSIRALTLMPKLR--QALVEYEELESAIAC--VTYAQIQPVLILGRQM-----YVNYSK 215
Query: 90 HTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYA 149
T+++ RD++N SVG + +N+LL +I N +
Sbjct: 216 STEIN--------RDFSN-------------SNASVG------QAPTNILLFTIINAIHP 248
Query: 150 VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKL 209
V ++ + + VQ+I +F KN GLQAL+++ V A ++AL G C G C L
Sbjct: 249 VNVETVKKICLQHAEVQRIVIFHKN-GLQALVEFLSVDDAQRIQQALNG-CDIFAGCCTL 306
Query: 210 HISYSRHTDLSIKVNNDRSRDYTL 233
I +S+ L++ N + D +
Sbjct: 307 KIDFSKTGRLNVHANTTETYDIEI 330
>gi|90075792|dbj|BAE87576.1| unnamed protein product [Macaca fascicularis]
Length = 226
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 32/48 (66%)
Query: 135 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQ 182
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+Q
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQ 224
>gi|345330029|ref|XP_003431460.1| PREDICTED: regulator of differentiation 1-like [Ornithorhynchus
anatinus]
Length = 670
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 39/66 (59%)
Query: 128 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
D L +S+VL +EN+ Y VTL+VL+ +F FG V KI F KN QAL+Q+ D
Sbjct: 170 DSGLLPGQSSVLRIIVENLFYPVTLEVLYQIFFKFGTVLKIITFTKNNQFQALLQFADPM 229
Query: 188 TAVVAK 193
A AK
Sbjct: 230 NAHYAK 235
>gi|145478423|ref|XP_001425234.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392303|emb|CAK57836.1| unnamed protein product [Paramecium tetraurelia]
Length = 358
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 61/100 (61%), Gaps = 5/100 (5%)
Query: 148 YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFC 207
+ +T + LH F+ FG ++KI +F++ +A +++ ++++A+ A++ L G I G
Sbjct: 24 FPLTNEYLHKKFNEFGDLKKILIFERGKTNKAFVEFHNLKSAIAARKQLNGLNIQGG--- 80
Query: 208 KLHISYSRHTDLSIK-VNNDRSRDYTLPSTPMVNSQPSIL 246
K+ I YSR +L+++ V+N R DYT S+ NS SIL
Sbjct: 81 KMIIHYSRLKNLNLEIVDNSRGTDYTQASSNSQNS-DSIL 119
>gi|387219209|gb|AFJ69313.1| polypyrimidine tract binding protein [Nannochloropsis gaditana
CCMP526]
Length = 324
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 170 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSR 229
MF+K G QAL+QYPDV +A A E + +Y + + YS H D+ ++ N DR+
Sbjct: 1 MFNKGAGNQALVQYPDVASAQAAFEQADHRNMYTDSNL-IRVGYSTHHDIKVRANTDRTW 59
Query: 230 DYTLPST 236
DYT T
Sbjct: 60 DYTKKKT 66
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 39 FEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSVKFQ 98
F K AG QALVQ+ D +A +A D R++ N+ +R+ YS H D+ V+
Sbjct: 2 FNKGAGNQALVQYPDVASAQAAFEQADHRNM---YTDSNL----IRVGYSTHHDIKVRAN 54
Query: 99 SHRSRDYTN 107
+ R+ DYT
Sbjct: 55 TDRTWDYTK 63
>gi|308502740|ref|XP_003113554.1| hypothetical protein CRE_26483 [Caenorhabditis remanei]
gi|308263513|gb|EFP07466.1| hypothetical protein CRE_26483 [Caenorhabditis remanei]
Length = 602
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 17/117 (14%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
+ VL+ ++ N QY V DV++ + +A G V ++A+ K +QAL+++ ++ A AK A
Sbjct: 122 NKVLVVTVLNAQYPVDADVIYQISNAQGRVLRVAVMHKPTIVQALVEFESMEIAKAAKHA 181
Query: 196 LEGHCIYDGGFCKLHISYSRHTDL-------SIKVNNDR---------SRDYTLPST 236
+ G IY G C L + +++ L I+ DR RD+T+P
Sbjct: 182 MNGADIY-SGCCTLKVEFAKVCGLFFFLNHHCIRFQPDRVRVTRQDKDQRDFTIPEN 237
>gi|156368308|ref|XP_001627637.1| predicted protein [Nematostella vectensis]
gi|156214552|gb|EDO35537.1| predicted protein [Nematostella vectensis]
Length = 203
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
SN+LL +I N + + + +LH + S G V +I +F KN GLQAL +A A
Sbjct: 102 SNILLLTIINPLHPINVKILHKICSPSGKVLRIVIFHKN-GLQAL-------SAERALAV 153
Query: 196 LEGHCIYDGGFCKLHISYSRHT-DLSIKVNNDRSRDYT 232
L G IY G C L I YS+ L++ N+D + DYT
Sbjct: 154 LNGQDIY-AGCCTLKIDYSKKAKKLNVFKNDDETWDYT 190
>gi|260784453|ref|XP_002587281.1| hypothetical protein BRAFLDRAFT_237696 [Branchiostoma floridae]
gi|229272423|gb|EEN43292.1| hypothetical protein BRAFLDRAFT_237696 [Branchiostoma floridae]
Length = 304
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 194 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
++L+G IY+ C L I YS+ L++K NND+SRDYT P P + QPS+
Sbjct: 4 QSLDGQNIYNA-CCTLRIDYSKLETLNVKYNNDKSRDYTRPELPAGDGQPSL 54
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 81/197 (41%), Gaps = 51/197 (25%)
Query: 63 ALDGRSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA---PSAIDA 119
+LDG++I CTLRI YS L+VK+ + +SRDYT P LP PS A
Sbjct: 5 SLDGQNIYN-------ACCTLRIDYSKLETLNVKYNNDKSRDYTRPELPAGDGQPSLEQA 57
Query: 120 SG---------QLSV-----GLDGK--------------------KLEPESNVLLASIEN 145
G LS+ GL G L+ +VLL S N
Sbjct: 58 MGLGTFDPGPPLLSLPSVPGGLTGSIPLAGTIPNLSAASAAARLAGLQQAGSVLLVSNLN 117
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 204
+ VT D L +F +G V ++ +F K ALIQ + A A + L ++
Sbjct: 118 TEM-VTPDALFTLFGVYGDVHRVKILFAKKD--NALIQMAEPHQANTAMQHLNNLRVWGK 174
Query: 205 GFCKLHISYSRHTDLSI 221
+ ++ S+H + +
Sbjct: 175 ---NIRVTLSKHNQVQL 188
>gi|350034148|dbj|GAA34297.1| heterogeneous nuclear ribonucleoprotein L [Clonorchis sinensis]
Length = 735
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 122 QLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN--GGLQA 179
Q+ G E ++ +LL I Y +T+DV+ + G V +I + KN ++A
Sbjct: 130 QIDTGRPRPPSEEQTKILLLDITAADYPITVDVIRSICQPHGKVLRIFIGKKNIDRSVEA 189
Query: 180 LIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 232
L++ + A KE ++G IY G C L ++YS+ + + + N+ S D++
Sbjct: 190 LVELDTSEDARKVKEQIDGADIY-YGCCTLKVTYSKISRVHVTKNDSESWDFS 241
>gi|123474487|ref|XP_001320426.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121903231|gb|EAY08203.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 413
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
S V+ I +Q ++ + ++ S +G V+KI F+KNG AL+Q DV+ A +A
Sbjct: 105 SRVICLQILKLQISLGIYDIYDECSNYGTVEKIICFEKNGKF-ALVQMHDVKEAALALAN 163
Query: 196 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 234
L Y F ++ I YS + D+ I+ NN +S D+T P
Sbjct: 164 LSNSSRYLPNF-QIKIQYSHNQDIIIQFNNAKSFDFTHP 201
>gi|149025818|gb|EDL82061.1| polypyrimidine tract binding protein 2, isoform CRA_a [Rattus
norvegicus]
Length = 322
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 194 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 245
+AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 27 QALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 77
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 83/194 (42%), Gaps = 46/194 (23%)
Query: 54 TETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA 113
++T S ALDG++I CTLRI +S +L+VK+ + +SRDYT P LP
Sbjct: 19 SDTFYSLLQALDGQNIYN-------ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSG 71
Query: 114 PS------AIDAS-----------GQLS------------------VGLDGKKLEPESNV 138
AI A+ G LS VG+ G + +
Sbjct: 72 DGQPALDPAIAAAFAKETSLLAVPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVL 131
Query: 139 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 198
L++++ + VT L +F +G VQ++ + N ALIQ D + +A L G
Sbjct: 132 LVSNLN--EEMVTPQSLFTLFGVYGDVQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNG 188
Query: 199 HCIYDGGFCKLHIS 212
+Y G ++ +S
Sbjct: 189 QKMY-GKIIRVTLS 201
>gi|307189437|gb|EFN73847.1| Polypyrimidine tract-binding protein 2 [Camponotus floridanus]
Length = 352
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 81 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKL 132
CTLRI YS +L+VK+ + +SRDYTNP LP + +DA+ S+ L G+ L
Sbjct: 21 CTLRIDYSKMQNLNVKYNNDKSRDYTNPNLPTGDANLDAA---SLALGGELL 69
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 186 VQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 237
++ A ++L+G +Y+ C L I YS+ +L++K NND+SRDYT P+ P
Sbjct: 1 MKNARFLAQSLDGQNVYNS-CCTLRIDYSKMQNLNVKYNNDKSRDYTNPNLP 51
>gi|145536093|ref|XP_001453774.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421507|emb|CAK86377.1| unnamed protein product [Paramecium tetraurelia]
Length = 386
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 24/154 (15%)
Query: 133 EPESNVLLASIENM--QYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAV 190
+P S +LL I + + +T D L F +G V+KI +F++ +A ++Y +V+ A+
Sbjct: 5 DPPSKILLLIITYLPQSFPLTNDFLFETFKQYGEVKKILIFERGKTNKAFVEYNEVKHAI 64
Query: 191 VAKEALEGHCIY-DGGFCKLHISYSRHTDLSIKVNNDRSRDY------------------ 231
A+ + G + GG +H S + DL + V++ R +Y
Sbjct: 65 SARRNMIGKSLTPQGGRLLIHYSRLKQLDLEV-VDHTRGTEYCSDDEETQPEQKYPLKSM 123
Query: 232 TLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQ 265
TLP++ ++ P ++ Q + + NQ+ GAQ
Sbjct: 124 TLPNSIQIS--PPLIKPQSIEQISNNGNQFKGAQ 155
>gi|256080379|ref|XP_002576459.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
Length = 597
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Query: 132 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
L ++++LL +I + +T++ ++ + ++G V +I +F K+ +QA++++ VQ A
Sbjct: 191 LSADNHILLFTIYDTDRPITVETIYRITFSYGSVLRIVIFRKSQ-VQAMVEFGSVQEARN 249
Query: 192 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY-TLPSTPMVNSQ 242
AK L G I+ G C L + Y+R LS+ N+ + D+ P N Q
Sbjct: 250 AKLHLNGADIF-PGCCTLKVDYARPARLSVPRNDQDNWDFEKCERDPFCNFQ 300
>gi|350854988|emb|CAZ32696.2| heterogeneous nuclear ribonucleoprotein l (hnrnp l), putative
[Schistosoma mansoni]
Length = 522
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Query: 132 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
L ++++LL +I + +T++ ++ + ++G V +I +F K +QA++++ VQ A
Sbjct: 116 LSADNHILLFTIYDTDRPITVETIYRITFSYGSVLRIVIFRK-SQVQAMVEFGSVQEARN 174
Query: 192 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY-TLPSTPMVNSQ 242
AK L G I+ G C L + Y+R LS+ N+ + D+ P N Q
Sbjct: 175 AKLHLNGADIF-PGCCTLKVDYARPARLSVPRNDQDNWDFEKCERDPFCNFQ 225
>gi|145526162|ref|XP_001448892.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416458|emb|CAK81495.1| unnamed protein product [Paramecium tetraurelia]
Length = 362
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 67/127 (52%), Gaps = 11/127 (8%)
Query: 133 EPESNVLLASIENMQ--YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAV 190
+P S +LL I + + + D+L F+ +G ++KI +F++ +A ++Y DV+ A+
Sbjct: 7 DPPSKILLLVITQLSPTFPLCNDLLFEQFAKYGDIKKILIFERGKANKAFVEYYDVKHAI 66
Query: 191 VAKEALEGHCIYDG-GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS-------Q 242
A++ G + +G G +H S ++ DL + V+ R DYT S+ ++
Sbjct: 67 EARKDKLGKYLAEGEGKLTIHFSRLKNLDLEV-VDKSRGTDYTQASSTNSDTMKHSNTDD 125
Query: 243 PSILGQQ 249
P++L QQ
Sbjct: 126 PNVLRQQ 132
>gi|145511796|ref|XP_001441820.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409081|emb|CAK74423.1| unnamed protein product [Paramecium tetraurelia]
Length = 363
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 15/129 (11%)
Query: 133 EPESNVLLASIENMQ--YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAV 190
+P S +LL I + + + D+L F +G ++KI +F++ +A ++Y D++ A+
Sbjct: 7 DPPSKILLLVITQLSPTFPLCNDLLFEQFGKYGDIKKILIFERGKANKAFVEYYDIKHAI 66
Query: 191 VAKEALEGHCIYDG-GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS-------- 241
A++ G + +G G +H S ++ DL + V+ R DYT T + NS
Sbjct: 67 EARKDKIGKYLAEGEGKLTIHFSRLKNLDLEV-VDKSRGTDYT--QTSITNSDVVKHSNT 123
Query: 242 -QPSILGQQ 249
P+IL QQ
Sbjct: 124 DDPNILRQQ 132
>gi|256077460|ref|XP_002575022.1| polypyrimidine tract binding protein [Schistosoma mansoni]
gi|360043943|emb|CCD81489.1| putative polypyrimidine tract binding protein [Schistosoma mansoni]
Length = 597
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 3/142 (2%)
Query: 92 DLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAV 150
+L +++ H+ + + + + +A+ + L G + VL ++N M +
Sbjct: 96 NLVMQYSKHQHLELHSENSSIGNAIQNANCIVQQDLSGANSGMPTTVLRVVVDNIMGQQI 155
Query: 151 TLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 210
+LH +F +G + +I + KN L+++ + A VA L G IY G C L
Sbjct: 156 NHTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIYT-GCCSLR 214
Query: 211 ISYSRHTD-LSIKVNNDRSRDY 231
+ +S++ L ++ +DR RDY
Sbjct: 215 VQFSKNRGPLEVRQESDRCRDY 236
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+F +G + +I T+ K + LV+F + A A L+G++I G C+LR+
Sbjct: 163 IFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIY-------TGCCSLRV 215
Query: 86 TYSAHTD-LSVKFQSHRSRDYTN 107
+S + L V+ +S R RDY N
Sbjct: 216 QFSKNRGPLEVRQESDRCRDYLN 238
>gi|358256069|dbj|GAA57625.1| heterogeneous nuclear ribonucleoprotein L [Clonorchis sinensis]
Length = 739
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 90/212 (42%), Gaps = 34/212 (16%)
Query: 26 VFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRI 85
+F FG V G ALV+F + + + + + P ++GP +R+
Sbjct: 66 IFRQFGEVKNAKVV--CNGKAALVEFCEISSPTRLVHMAK-------INPFHVGPNRVRL 116
Query: 86 TYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN 145
+S+ T + F S R + LP SG E + +L +
Sbjct: 117 EFSSET---IPFSSSRQPEPKGTLLP--------SG-----------EEATCILHLDVAA 154
Query: 146 MQYAVTLDVLHMVFSAFGPVQKIAMFDKN--GGLQALIQYPDVQTAVVAKEALEGHCIYD 203
Y +T+DV+ + G + ++ + KN L+ L+++ + A AKE L+G IY
Sbjct: 155 ADYPITVDVIRSICEPHGKLVRVFIGKKNVDRSLEVLVEFESPKDAAKAKEHLDGADIY- 213
Query: 204 GGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
G C L ++S+ + + N+ S D++ P+
Sbjct: 214 SGCCSLTATFSKVQKVHVTKNDSESWDFSGPN 245
>gi|226481683|emb|CAX73739.1| Heterogeneous nuclear ribonucleoprotein L [Schistosoma japonicum]
Length = 518
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 132 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
L ++++LL +I + +T++ ++ + ++G V +I +F K +QA++++ ++Q A
Sbjct: 116 LSTDNHILLFTIYDTDRPITVETIYRITFSYGNVLRIVIFRK-SQVQAMVEFGNIQEARK 174
Query: 192 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY 231
AK L G I+ G C L + Y+R L++ N+ + D+
Sbjct: 175 AKLHLNGADIF-PGCCTLKVDYARPARLTVPRNDQDNWDF 213
>gi|226481681|emb|CAX73738.1| Heterogeneous nuclear ribonucleoprotein L [Schistosoma japonicum]
Length = 518
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 132 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
L ++++LL +I + +T++ ++ + ++G V +I +F K +QA++++ ++Q A
Sbjct: 116 LSTDNHILLFTIYDTDRPITVETIYRITFSYGNVLRIVIFRK-SQVQAMVEFGNIQEARK 174
Query: 192 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY 231
AK L G I+ G C L + Y+R L++ N+ + D+
Sbjct: 175 AKLHLNGADIF-PGCCTLKVDYARPARLTVPRNDQDNWDF 213
>gi|226467722|emb|CAX69737.1| Heterogeneous nuclear ribonucleoprotein L [Schistosoma japonicum]
Length = 562
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 132 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
L ++++LL +I + +T++ ++ + ++G V +I +F K +QA++++ ++Q A
Sbjct: 116 LSTDNHILLFTIYDTDRPITVETIYRITFSYGNVLRIVIFRK-SQVQAMVEFGNIQEARK 174
Query: 192 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY 231
AK L G I+ G C L + Y+R L++ N+ + D+
Sbjct: 175 AKLHLNGADIF-PGCCTLKVDYARPARLTVPRNDQDNWDF 213
>gi|13435822|gb|AAH04763.1| Hnrpll protein, partial [Mus musculus]
Length = 340
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
Query: 176 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
G+QA++++ V A AK AL G IY G C L I Y+R T L++ N++ S DYT
Sbjct: 3 GIQAMVEFESVLCAQKAKAALNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT--- 58
Query: 236 TPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGA--------- 286
P + + G+Q ++G + + + P P+ P+ G+
Sbjct: 59 KPYLGRRDRGKGRQRQAILGDHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAY 115
Query: 287 -VPPASQSMPMMGNHPYMPPGSMPMGPGMMQMHM 319
+P AS S G+ P GS+ M G+ Q+ M
Sbjct: 116 PLPQASSSYMHGGS----PSGSVVMVSGLHQLKM 145
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 44 GFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSR 103
G QA+V+F A AK AL+G I G CTL+I Y+ T L+V + S
Sbjct: 3 GIQAMVEFESVLCAQKAKAALNGADI-------YAGCCTLKIEYARPTRLNVIRNDNDSW 55
Query: 104 DYTNPYL 110
DYT PYL
Sbjct: 56 DYTKPYL 62
>gi|145516865|ref|XP_001444321.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411732|emb|CAK76924.1| unnamed protein product [Paramecium tetraurelia]
Length = 362
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 67/127 (52%), Gaps = 11/127 (8%)
Query: 133 EPESNVLLASIENMQ--YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAV 190
+P S +LL + + + ++ ++L FS +G ++KI +F++ +A ++Y DV+ A+
Sbjct: 7 DPPSKILLLVMTQLSPTFPLSNELLFEQFSKYGDIKKILIFERGKANKAFVEYYDVKHAI 66
Query: 191 VAKEALEGHCIYDG-GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVN-------SQ 242
A++ G + +G G +H S ++ DL + V+ R DYT S+ +
Sbjct: 67 EARKDKLGKYLAEGEGKLTIHFSRLKNLDLEV-VDKSRGTDYTQASSTNSDLMKHSNTDD 125
Query: 243 PSILGQQ 249
P+IL QQ
Sbjct: 126 PNILRQQ 132
>gi|395751132|ref|XP_002829227.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L isoform 2,
partial [Pongo abelii]
Length = 248
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYP 184
++VLL +I N Y++T DVL+ + + GPVQ+I +F KN G+QA+++YP
Sbjct: 192 NSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEYP 239
>gi|123491774|ref|XP_001325911.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121908818|gb|EAY13688.1| hypothetical protein TVAG_371620 [Trichomonas vaginalis G3]
Length = 412
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 160 SAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDL 219
S FG V KI F+K+G AL+Q +Q A +A L ++ F KL I +S++ D+
Sbjct: 127 SLFGTVDKIICFEKSGKF-ALVQMHTIQDAGLALYNLSNCERHNPSF-KLRIQFSKNHDI 184
Query: 220 SIKVNNDRSRDYTLPSTPM 238
IK NN +S D+T PS +
Sbjct: 185 VIKFNNTKSFDFTQPSARL 203
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 12/83 (14%)
Query: 28 SAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDG--RSIPRYLLPENMGPCTLRI 85
S FG V KI FEK+ F ALVQ + A A L R P + LRI
Sbjct: 127 SLFGTVDKIICFEKSGKF-ALVQMHTIQDAGLALYNLSNCERHNPSF---------KLRI 176
Query: 86 TYSAHTDLSVKFQSHRSRDYTNP 108
+S + D+ +KF + +S D+T P
Sbjct: 177 QFSKNHDIVIKFNNTKSFDFTQP 199
>gi|226468142|emb|CAX76298.1| Regulator of differentiation 1 [Schistosoma japonicum]
Length = 495
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Query: 93 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 151
L +++ H+ + + + + +A+ + L G + VL ++N M +
Sbjct: 26 LVMQYSKHQHLELHSENTSIGNAIQNANCIVQQDLSGANSGMPTTVLRVVVDNIMGQQIN 85
Query: 152 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 211
+LH +F +G + +I + KN L+++ + A VA L G IY G C L +
Sbjct: 86 HTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIYT-GCCSLRV 144
Query: 212 SYSRHTD-LSIKVNNDRSRDY 231
+S++ L ++ +++ RDY
Sbjct: 145 QFSKNRGPLEVRQESEKCRDY 165
>gi|226468144|emb|CAX76299.1| Regulator of differentiation 1 [Schistosoma japonicum]
Length = 436
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Query: 84 RITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASI 143
++T T L +++ H+ + + + + +A+ + L G + VL +
Sbjct: 103 QVTLRGRT-LVMQYSKHQHLELHSENTSIGNAIQNANCIVQQDLSGANSGMPTTVLRVVV 161
Query: 144 EN-MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 202
+N M + +LH +F +G + +I + KN L+++ + A VA L G IY
Sbjct: 162 DNIMGQQINHTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIY 221
Query: 203 DGGFCKLHISYSRHTD-LSIKVNNDRSRDY 231
G C L + +S++ L ++ +++ RDY
Sbjct: 222 T-GCCSLRVQFSKNRGPLEVRQESEKCRDY 250
>gi|145532711|ref|XP_001452111.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419788|emb|CAK84714.1| unnamed protein product [Paramecium tetraurelia]
Length = 651
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 134 PESNVLLASIENMQYAVTL--DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 191
P +NV+L I N + TL D + VFS FG +Q++ +F+++ + I++ ++++A
Sbjct: 12 PNTNVILVVITN-KANKTLPHDKYYKVFSPFGTIQRMLIFERSLTWKTFIEFDNIESAFK 70
Query: 192 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 234
A+ + D +++ S+ T +S + NN DYT+P
Sbjct: 71 ARSQMNDKQFCDDTSLLMNVYASKLTYISFQENNVWGVDYTIP 113
>gi|76157758|gb|AAX28586.2| SJCHGC05650 protein [Schistosoma japonicum]
Length = 381
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Query: 93 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 151
L +++ H+ + + + + +A+ + L G + VL ++N M +
Sbjct: 123 LVMQYSKHQHLELHSENTSIGNAIQNANCIVQQDLSGANSGMPTTVLRVVVDNIMGQQIN 182
Query: 152 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 211
+LH +F +G + +I + KN L+++ + A VA L G IY G C L +
Sbjct: 183 HTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIYT-GCCSLRV 241
Query: 212 SYSRHTD-LSIKVNNDRSRDY 231
+S++ L ++ +++ RDY
Sbjct: 242 QFSKNRGPLEVRQESEKCRDY 262
>gi|1370048|emb|CAA64866.1| mec-8 [Caenorhabditis elegans]
Length = 312
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%)
Query: 143 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 202
+ N+ V D L VF AF ++ + +KNG A ++Y D+Q A A +L+G I
Sbjct: 232 VANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSDLQKATQAMISLQGFQIT 291
Query: 203 DGGFCKLHISYSRH 216
L I Y+R+
Sbjct: 292 ANDRGGLRIEYARN 305
>gi|322798025|gb|EFZ19869.1| hypothetical protein SINV_08848 [Solenopsis invicta]
Length = 112
Score = 48.1 bits (113), Expect = 0.006, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 194
++VLL +I N Y +T++VLH + + G VQ+I +F KN G+QA++++ V++A+ AKE
Sbjct: 54 NHVLLYTIMNPIYPITVEVLHTISAPSGQVQRIVIFKKN-GVQAMVKFDTVKSAIRAKE 111
>gi|17508419|ref|NP_492508.1| Protein MEC-8 [Caenorhabditis elegans]
gi|1369981|emb|CAA64867.1| mec-8 [Caenorhabditis elegans]
gi|3877217|emb|CAB03111.1| Protein MEC-8 [Caenorhabditis elegans]
Length = 312
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%)
Query: 143 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 202
+ N+ V D L VF AF ++ + +KNG A ++Y D+Q A A +L+G I
Sbjct: 232 VANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSDLQKATQAMISLQGFQIT 291
Query: 203 DGGFCKLHISYSRH 216
L I Y+R+
Sbjct: 292 ANDRGGLRIEYARN 305
>gi|226472642|emb|CAX71007.1| Regulator of differentiation 1 [Schistosoma japonicum]
Length = 622
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Query: 93 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 151
L +++ H+ + + + + +A+ + L G + VL ++N M +
Sbjct: 123 LVMQYSKHQHLELHSENTSIGNAIQNANCIVQQDLSGANSGMPTTVLRVVVDNIMGQQIN 182
Query: 152 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 211
+LH +F +G + +I + KN L+++ + A VA L G IY G C L +
Sbjct: 183 HTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIYT-GCCSLRV 241
Query: 212 SYSRHTD-LSIKVNNDRSRDY 231
+S++ L ++ +++ RDY
Sbjct: 242 QFSKNRGPLEVRQESEKCRDY 262
>gi|226472640|emb|CAX71006.1| Regulator of differentiation 1 [Schistosoma japonicum]
Length = 596
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Query: 93 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 151
L +++ H+ + + + + +A+ + L G + VL ++N M +
Sbjct: 97 LVMQYSKHQHLELHSENTSIGNAIQNANCIVQQDLSGANSGMPTTVLRVVVDNIMGQQIN 156
Query: 152 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 211
+LH +F +G + +I + KN L+++ + A VA L G IY G C L +
Sbjct: 157 HTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIYT-GCCSLRV 215
Query: 212 SYSRHTD-LSIKVNNDRSRDY 231
+S++ L ++ +++ RDY
Sbjct: 216 QFSKNRGPLEVRQESEKCRDY 236
>gi|226468146|emb|CAX76300.1| Regulator of differentiation 1 [Schistosoma japonicum]
Length = 622
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Query: 93 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 151
L +++ H+ + + + + +A+ + L G + VL ++N M +
Sbjct: 123 LVMQYSKHQHLELHSENTSIGNAIQNANCIVQQDLSGANSGMPTTVLRVVVDNIMGQQIN 182
Query: 152 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 211
+LH +F +G + +I + KN L+++ + A VA L G IY G C L +
Sbjct: 183 HTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIYT-GCCSLRV 241
Query: 212 SYSRHTD-LSIKVNNDRSRDY 231
+S++ L ++ +++ RDY
Sbjct: 242 QFSKNRGPLEVRQESEKCRDY 262
>gi|226468148|emb|CAX76301.1| Regulator of differentiation 1 [Schistosoma japonicum]
Length = 610
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Query: 93 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 151
L +++ H+ + + + + +A+ + L G + VL ++N M +
Sbjct: 111 LVMQYSKHQHLELHSENTSIGNAIQNANCIVQQDLSGANSGMPTTVLRVVVDNIMGQQIN 170
Query: 152 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 211
+LH +F +G + +I + KN L+++ + A VA L G IY G C L +
Sbjct: 171 HTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIYT-GCCSLRV 229
Query: 212 SYSRHTD-LSIKVNNDRSRDY 231
+S++ L ++ +++ RDY
Sbjct: 230 QFSKNRGPLEVRQESEKCRDY 250
>gi|154422945|ref|XP_001584484.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121918731|gb|EAY23498.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 314
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 160 SAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDL 219
S FG VQKI F+K G AL+Q +V A + L Y F +L + YS++T++
Sbjct: 128 SHFGVVQKIICFEKKGKY-ALLQMENVDQAALVLANLSIPNRYAPSF-ELRVQYSKNTNI 185
Query: 220 SIKVNNDRSRDYTLP 234
I+ NN +S D+T+P
Sbjct: 186 VIQYNNSKSFDFTVP 200
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 35/197 (17%)
Query: 28 SAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITY 87
S FG V KI FEK + AL+Q + + A+ L SIP P LR+ Y
Sbjct: 128 SHFGVVQKIICFEKKGKY-ALLQMENVDQAALV---LANLSIPNRYAPS----FELRVQY 179
Query: 88 SAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGK--KLEPES-NVLLASIE 144
S +T++ +++ + +S D+T P A+D L GL + EPES N + S +
Sbjct: 180 SKNTNIVIQYNNSKSFDFT------VPGALDEFELLREGLTNEVPYFEPESCNEIPRSFD 233
Query: 145 NMQ-------YAVTLDVLHM----------VFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 187
++ Y +L V + +F +G V K+ + K + +Q +
Sbjct: 234 FVRPVQFDPAYGNSLTVTGLPANQATFARNIFQQYGAVLKVKVMTKQNEVLTYVQMRNAF 293
Query: 188 TAVVAKEALEGHCIYDG 204
A +A + G +++G
Sbjct: 294 YARLAMTNINGM-VFNG 309
>gi|268564730|ref|XP_002639203.1| C. briggsae CBR-MEC-8 protein [Caenorhabditis briggsae]
Length = 305
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%)
Query: 143 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 202
+ N+ V D L VF AF ++ + +KNG A ++Y D+Q A A AL+G +
Sbjct: 225 VANLSAEVNEDQLRGVFKAFTGFTRLRLHNKNGSCVAFVEYSDLQKATQAMLALQGFQVS 284
Query: 203 DGGFCKLHISYSRH 216
L I Y+R+
Sbjct: 285 ANDRGGLRIEYARN 298
>gi|118382059|ref|XP_001024189.1| hypothetical protein TTHERM_00456820 [Tetrahymena thermophila]
gi|89305956|gb|EAS03944.1| hypothetical protein TTHERM_00456820 [Tetrahymena thermophila
SB210]
Length = 842
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
Query: 118 DASGQLSVGLDGKKLEPESNVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGG 176
D SG+ S + + VLL + N + +T D+++ +F +G + KI +FDK
Sbjct: 20 DYSGRRSQKTTISDVSVKKRVLLVCVYNKKGTLITHDIIYRLFMKYGEIYKILIFDKCKN 79
Query: 177 LQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPST 236
+ ++ ++ A A++ L + ++D G K+ + Y++ + + NN DY
Sbjct: 80 WKIFVEMATLEQAEKARDGLNNYQLFDDG-SKMTVYYAKVDQIVFQNNNSGGVDYRELKQ 138
Query: 237 PMVN 240
VN
Sbjct: 139 RKVN 142
>gi|125589639|gb|EAZ29989.1| hypothetical protein OsJ_14050 [Oryza sativa Japonica Group]
gi|218194466|gb|EEC76893.1| hypothetical protein OsI_15106 [Oryza sativa Indica Group]
Length = 201
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 195
VL + N+ Y VT D+LH VF A+G +KI ++ ++A +Q+ + A A++
Sbjct: 20 EQVLHVTASNLLYPVTKDLLHRVFYAYG-AKKICLYQMETRVEASVQFQSREDAEYARKT 78
Query: 196 LEGHCIYDGGFCKL 209
GH IY G C++
Sbjct: 79 FHGHNIYHGC-CQM 91
>gi|328792474|ref|XP_003251729.1| PREDICTED: hypothetical protein LOC100577881 [Apis mellifera]
Length = 120
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYP 184
++VLL +I N Y +T++VLH + + G VQ+I +F KN G+QA+++YP
Sbjct: 43 NHVLLFTIINPVYPITVEVLHTISAPSGQVQRIVIFKKN-GVQAMVEYP 90
>gi|149050610|gb|EDM02783.1| heterogeneous nuclear ribonucleoprotein L-like (predicted), isoform
CRA_b [Rattus norvegicus]
Length = 410
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 77/176 (43%), Gaps = 21/176 (11%)
Query: 154 VLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 213
+ +++++ + ++ + G + + + V A AK AL G IY G C L I Y
Sbjct: 51 MFYILYATLLEKYSVLLYSREMGYKQCLTFESVLCAQKAKAALNGADIY-AGCCTLKIEY 109
Query: 214 SRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQ 273
+R T L++ N++ S DYT P + + G+Q ++G + + + P
Sbjct: 110 ARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILGDHPSSFRHDGYGSHGPLL 166
Query: 274 PMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPPGSMPMGPGMMQMHM 319
P+ P+ G+ +P AS S G+ P GS+ M G+ Q+ M
Sbjct: 167 PL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGS----PSGSVVMVSGLHQLKM 215
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 34 HKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTDL 93
+ + + + G++ + F A AK AL+G I G CTL+I Y+ T L
Sbjct: 63 YSVLLYSREMGYKQCLTFESVLCAQKAKAALNGADI-------YAGCCTLKIEYARPTRL 115
Query: 94 SVKFQSHRSRDYTNPYL 110
+V + S DYT PYL
Sbjct: 116 NVIRNDNDSWDYTKPYL 132
>gi|123500629|ref|XP_001327903.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121910839|gb|EAY15680.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 432
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 160 SAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDL 219
S FG V+KI F+K G AL+Q V+ A + L Y F +L + YS++ ++
Sbjct: 128 SHFGIVEKIICFEKQGKF-ALVQMQTVEQAALVLANLTIPNRYAPSF-ELRVQYSKNANI 185
Query: 220 SIKVNNDRSRDYTLP 234
I+ NN +S D+TLP
Sbjct: 186 VIQFNNSKSFDFTLP 200
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Query: 28 SAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITY 87
S FG V KI FEK F ALVQ +T A L +IP P LR+ Y
Sbjct: 128 SHFGIVEKIICFEKQGKF-ALVQM---QTVEQAALVLANLTIPNRYAPS----FELRVQY 179
Query: 88 SAHTDLSVKFQSHRSRDYTNP 108
S + ++ ++F + +S D+T P
Sbjct: 180 SKNANIVIQFNNSKSFDFTLP 200
>gi|380011401|ref|XP_003689795.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Apis
florea]
Length = 100
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYP 184
++VLL +I N Y +T++VLH + + G VQ+I +F KN G+QA+++YP
Sbjct: 43 NHVLLFTIINPVYPITVEVLHTISAPSGQVQRIVIFKKN-GVQAMVEYP 90
>gi|405972821|gb|EKC37569.1| Heterogeneous nuclear ribonucleoprotein L [Crassostrea gigas]
Length = 186
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQAL 180
+++LL ++ N QY +T+DV+H + +A+G VQ+I +F KN G+QA+
Sbjct: 118 NHILLFTVLNPQYPITVDVMHKICTAYGQVQRIVIFKKN-GVQAM 161
>gi|37806432|dbj|BAC99625.1| hypothetical protein [Oryza sativa Japonica Group]
gi|125603374|gb|EAZ42699.1| hypothetical protein OsJ_27267 [Oryza sativa Japonica Group]
Length = 401
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
Query: 111 PVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM 170
P A S++D S ++ + K ++VL ++ ++ Y VT +VL VFS +G +++ +
Sbjct: 58 PGATSSVD-SQKVFDEMPSNKEPTTASVLHVTMSHVLYPVTAEVLLQVFSPYG-AEEVRV 115
Query: 171 FDKNG-GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 213
+++ ++A I + Q A A+EAL G CIY+G C L + Y
Sbjct: 116 YNQGTIQVEAFILFRLCQDATRAREALHGCCIYNGC-CFLDVKY 158
>gi|198417513|ref|XP_002121186.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein L
[Ciona intestinalis]
Length = 106
Score = 45.8 bits (107), Expect = 0.027, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYP 184
+ VLL ++ N Y +T DVLHM+ G VQ+I +F K G+QA+I+YP
Sbjct: 52 NKVLLFTVVNAVYPITTDVLHMICEPCGEVQRIVIFRKR-GVQAMIEYP 99
>gi|341895190|gb|EGT51125.1| CBN-MEC-8 protein [Caenorhabditis brenneri]
gi|341898355|gb|EGT54290.1| hypothetical protein CAEBREN_29517 [Caenorhabditis brenneri]
Length = 313
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 143 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 202
+ N+ V D L VF AF ++ + +KNG A ++Y D+Q A A +L+G +
Sbjct: 233 VANLSAEVNEDQLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSDLQKATQAMMSLQGFQVS 292
Query: 203 DGGFCKLHISYSRH 216
L I Y+R+
Sbjct: 293 ANDRGGLRIEYARN 306
>gi|383856701|ref|XP_003703846.1| PREDICTED: uncharacterized protein LOC100878109 [Megachile
rotundata]
Length = 141
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYP 184
++VLL +I N Y +T++VLH + + G VQ+I +F KN G+QA+++YP
Sbjct: 43 NHVLLFTIINPVYPITVEVLHTISAPSGQVQRIVIFKKN-GVQAMVEYP 90
>gi|118384092|ref|XP_001025199.1| polypyrimidine tract-binding protein 1 (PTB) [Tetrahymena
thermophila]
gi|89306966|gb|EAS04954.1| polypyrimidine tract-binding protein 1 (PTB) [Tetrahymena
thermophila SB210]
Length = 1302
Score = 45.4 bits (106), Expect = 0.034, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 134 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN-GGLQALIQYPDVQTAVVA 192
P S +L+ E +T D L +FS +G V K+ +F K+ +A I+ V++A A
Sbjct: 404 PSSVLLVIVFELKDLQITNDQLQQIFSPYGFVNKVLIFQKSTDSTKAFIEMNSVESAKKA 463
Query: 193 KEALEGHCI--YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS 241
KEAL I K + YS+ TDL++ +DY L S + NS
Sbjct: 464 KEALNRAKIPLLPNQKYKFKVHYSQTTDLNLCNYKTEGKDYRLSSNKITNS 514
Score = 43.1 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 25 HVFSAFGFVHKITTFEK-TAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTL 83
+FS +GFV+K+ F+K T +A ++ + E+A AK AL+ IP LLP
Sbjct: 427 QIFSPYGFVNKVLIFQKSTDSTKAFIEMNSVESAKKAKEALNRAKIP--LLPNQ--KYKF 482
Query: 84 RITYSAHTDLSVKFQSHRSRDY 105
++ YS TDL++ +DY
Sbjct: 483 KVHYSQTTDLNLCNYKTEGKDY 504
>gi|218201133|gb|EEC83560.1| hypothetical protein OsI_29204 [Oryza sativa Indica Group]
Length = 260
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG-GLQALIQYPDVQTAVVAKE 194
++VL ++ ++ Y VT +VL VFS +G +++ ++++ ++A I + Q A A+E
Sbjct: 82 ASVLHVTMSHVLYPVTAEVLLQVFSPYG-AEEVRVYNQGTIQVEAFILFRLCQDATRARE 140
Query: 195 ALEGHCIYDGGFCKLHISY 213
AL G CIY+G C L + Y
Sbjct: 141 ALHGCCIYNGC-CFLDVKY 158
>gi|145503200|ref|XP_001437577.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404728|emb|CAK70180.1| unnamed protein product [Paramecium tetraurelia]
Length = 601
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 136 SNVLLASIENMQYAVTL--DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 193
+NV+L I N + TL D VFS FG +Q++ +F+++ + I++ + ++A+ A+
Sbjct: 6 TNVILVVITN-KANKTLGHDKYFKVFSQFGTIQRMLIFERSLTWKTFIEFDNPESAIKAR 64
Query: 194 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 233
+++ D +++ S+ T ++ + NN DYTL
Sbjct: 65 QSMNDKLFCDDAQLTMNVYASKLTYITFQENNTGGVDYTL 104
>gi|294931323|ref|XP_002779833.1| neural polypyrimidine tract binding protein, putative [Perkinsus
marinus ATCC 50983]
gi|239889519|gb|EER11628.1| neural polypyrimidine tract binding protein, putative [Perkinsus
marinus ATCC 50983]
Length = 210
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 35 KITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPC-TLRITYSAHTDL 93
++ F + ALV+ E A K LDG++I C TLRI YS+ L
Sbjct: 17 RVIVFHRGTVMHALVETKSQEIADQVKRELDGQNI--------FTQCNTLRIRYSSFRQL 68
Query: 94 SVKFQSHRSRDYTNPYLP 111
V + + RS D+TN LP
Sbjct: 69 HVNYNNERSWDFTNAGLP 86
>gi|342183429|emb|CCC92909.1| putative RNA-binding protein [Trypanosoma congolense IL3000]
Length = 320
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 136 SNVLLASIENMQY------AVTLDVLHMVFSAFGPVQKIAMFDKNGG-------LQALIQ 182
S LL S+ N QY ++T +++ +F +G VQKI + KN +QAL+Q
Sbjct: 170 SKTLLVSMFNTQYDVSAATSITPMIVYQIFCNYGAVQKIVVLPKNDSSQRNHNRVQALVQ 229
Query: 183 YPDVQTAVVAKEALEGHCIYDGGFC--KLHISYSRHTD-------LSIKVNND 226
+ QTA K L+G + G L I +SR + +S+ VN D
Sbjct: 230 FDSKQTAENVKNILQGQPVTIGETVTFTLDIQFSRMDNIKTSNPAISLVVNED 282
>gi|296224059|ref|XP_002757888.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Callithrix jacchus]
Length = 509
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 186
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ +V
Sbjct: 167 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVDRLNV 216
>gi|397493591|ref|XP_003817687.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Pan paniscus]
Length = 505
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 186
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ +V
Sbjct: 163 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVDRLNV 212
>gi|410955436|ref|XP_003984359.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Felis catus]
Length = 510
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 186
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ +V
Sbjct: 168 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVDRLNV 217
>gi|403269680|ref|XP_003926844.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Saimiri
boliviensis boliviensis]
gi|33518884|gb|AAQ20083.1| stromal RNA regulating factor [Homo sapiens]
Length = 508
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 186
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ +V
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVDRLNV 215
>gi|395731919|ref|XP_002812155.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Pongo abelii]
Length = 509
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 186
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ +V
Sbjct: 167 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVDRLNV 216
>gi|109102687|ref|XP_001109883.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Macaca mulatta]
Length = 508
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 186
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ +V
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVDRLNV 215
>gi|358383610|gb|EHK21274.1| hypothetical protein TRIVIDRAFT_116557, partial [Trichoderma virens
Gv29-8]
Length = 466
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 24/143 (16%)
Query: 106 TNPYLPVA----PSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSA 161
TNP +P A S +DA G LS ++ PE N + + VT DVL +F
Sbjct: 41 TNP-IPTAITSPRSGVDAGGILSPTTGFRRAAPEPNKRALYVGGLDQRVTEDVLRQIFET 99
Query: 162 FGPVQKIAMF-DKN--GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHT- 217
G VQ + + DKN G ++Y D A A + L G ++ +++ +Y +T
Sbjct: 100 TGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEI-RVNWAYQSNTT 158
Query: 218 --------------DLSIKVNND 226
DLS +VN+D
Sbjct: 159 SKEDTSNHFHIFVGDLSNEVNDD 181
>gi|340522219|gb|EGR52452.1| predicted protein [Trichoderma reesei QM6a]
Length = 477
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 24/143 (16%)
Query: 106 TNPYLPVA----PSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSA 161
TNP +P A S +DA G LS ++ PE N + + VT DVL +F
Sbjct: 39 TNP-IPTAITSPRSGVDAGGILSPTTGFRRAAPEPNKRALYVGGLDQRVTEDVLRQIFET 97
Query: 162 FGPVQKIAMF-DKN--GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHT- 217
G VQ + + DKN G ++Y D A A + L G ++ +++ +Y +T
Sbjct: 98 TGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEI-RVNWAYQSNTT 156
Query: 218 --------------DLSIKVNND 226
DLS +VN+D
Sbjct: 157 SKEDTSNHFHIFVGDLSNEVNDD 179
>gi|402890608|ref|XP_003908575.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Papio anubis]
Length = 403
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 186
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ +V
Sbjct: 61 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVDRLNV 110
>gi|226470156|emb|CAX70359.1| Polypyrimidine tract-binding protein 1 [Schistosoma japonicum]
Length = 415
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 26/208 (12%)
Query: 30 FGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCT--LRITY 87
FG + + K+ QALV+ E+A S + M CT LR Y
Sbjct: 66 FGSIANMILTRKSC--QALVEMDTLESAES-------------MFGYYMTVCTPNLRGKY 110
Query: 88 SAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQ 147
T S K+ S + N L SAI+ + + V + + VL +E
Sbjct: 111 PIETQFS-KYSSLTNATTNNATL----SAIEEANKQFVTFRCENEDSPKTVLHIHVEKSY 165
Query: 148 YAVTLDVL--HMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY--D 203
+ + L M F FG + ++ F KN A +++ + +A VAK + G ++ +
Sbjct: 166 NPMEIGYLPFFMAFKPFGRILRVVSFKKNDSRHAFLEFSNSLSAHVAKLLMNGVPLFPME 225
Query: 204 GGFCKLHISYSRHTDLSIKVNNDRSRDY 231
F L +SR + L I ++ SRD+
Sbjct: 226 CNFHILRTEFSRQSTLEIHREDNSSRDF 253
>gi|308494202|ref|XP_003109290.1| CRE-MEC-8 protein [Caenorhabditis remanei]
gi|308246703|gb|EFO90655.1| CRE-MEC-8 protein [Caenorhabditis remanei]
Length = 305
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%)
Query: 143 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 202
+ N+ V D L VF AF ++ + +KNG A ++Y D+ A A +L+G +
Sbjct: 225 VANLSAEVNEDQLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSDLHKATQAMMSLQGFQVS 284
Query: 203 DGGFCKLHISYSRH 216
L I Y+R+
Sbjct: 285 ANDRGGLRIEYARN 298
>gi|256077594|ref|XP_002575087.1| polypyrimidine tract binding protein [Schistosoma mansoni]
gi|360045192|emb|CCD82740.1| putative polypyrimidine tract binding protein [Schistosoma mansoni]
Length = 584
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 4/123 (3%)
Query: 113 APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVL--HMVFSAFGPVQKIAM 170
A SA++ + + V + + VL +E + ++ + L M F FG + ++
Sbjct: 131 ATSAVEEANKQFVAFRCENEDSPKTVLHIHVEKLHGSMEIGYLPFFMSFKPFGQILRVIS 190
Query: 171 FDKNGGLQALIQYPDVQTAVVAKEALEGHCIY--DGGFCKLHISYSRHTDLSIKVNNDRS 228
F KN A ++Y + +A VAK + G ++ + F L +SR L I ++
Sbjct: 191 FKKNDSRHAFLEYSNAISAHVAKLQMNGVPLFPMESNFNILRTEFSRQQTLEIHREDNSC 250
Query: 229 RDY 231
RD+
Sbjct: 251 RDF 253
>gi|167522112|ref|XP_001745394.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776352|gb|EDQ89972.1| predicted protein [Monosiga brevicollis MX1]
Length = 459
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 18/100 (18%)
Query: 134 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 193
P S VL +I N + TL+ LH + +G V +I K+G +Q L +Y A VA
Sbjct: 154 PPSRVLSINICNCPFDPTLEFLHAQMARYGQVLRIVTIRKDGDMQVLAEYAQQSEATVAL 213
Query: 194 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 233
AL+ LSI+ N +RD+T+
Sbjct: 214 NALQNET------------------LSIRNNTSSARDFTV 235
>gi|328792476|ref|XP_003251730.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Apis
mellifera]
Length = 394
Score = 44.3 bits (103), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 180 LIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
+I + V++A AKE L G IY G C L I +++ T L++ N+ S DYT P+
Sbjct: 1 MITFDSVESATRAKETLHGADIYSG-CCTLKIDFAKPTKLNVYKNDAESWDYTTPT 55
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 48 LVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRITYSAHTDLSVKFQSHRSRDYTN 107
++ F E+A+ AK L G I G CTL+I ++ T L+V S DYT
Sbjct: 1 MITFDSVESATRAKETLHGADI-------YSGCCTLKIDFAKPTKLNVYKNDAESWDYTT 53
Query: 108 PYLPVAPSAIDASGQ 122
P L + DA+G
Sbjct: 54 PTLGSSAHKNDATGN 68
>gi|407405096|gb|EKF30263.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 336
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 15/99 (15%)
Query: 136 SNVLLASIENMQYAVTLD------VLHMVFSAFGPVQKIAMFDKN-------GGLQALIQ 182
S LL S+ N QY V+ +++ +F +G VQKI + KN +QAL+Q
Sbjct: 162 SKTLLVSMFNTQYDVSAAAQITPMIVYQIFGNYGSVQKIVVLPKNESSQRNHNRVQALVQ 221
Query: 183 YPDVQTAVVAKEALEGH--CIYDGGFCKLHISYSRHTDL 219
+ TA K L+G I D L I +SR D+
Sbjct: 222 FDSKVTAENVKSILQGQPVTIGDTVTFTLDIQFSRMDDI 260
>gi|407844094|gb|EKG01787.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 325
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 15/99 (15%)
Query: 136 SNVLLASIENMQYAVTLD------VLHMVFSAFGPVQKIAMFDKN-------GGLQALIQ 182
S LL S+ N QY V+ +++ +F +G VQKI + KN +QAL+Q
Sbjct: 162 SKTLLVSMFNTQYDVSAAAQITPMIVYQIFGNYGSVQKIVVLPKNESSQRNHNRVQALVQ 221
Query: 183 YPDVQTAVVAKEALEGH--CIYDGGFCKLHISYSRHTDL 219
+ TA K L+G I D L I +SR D+
Sbjct: 222 FDSKVTAENVKSILQGQPVTIGDTVTFTLDIQFSRMDDI 260
>gi|71423973|ref|XP_812637.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70877443|gb|EAN90786.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 325
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 15/99 (15%)
Query: 136 SNVLLASIENMQYAVTLD------VLHMVFSAFGPVQKIAMFDKN-------GGLQALIQ 182
S LL S+ N QY V+ +++ +F +G VQKI + KN +QAL+Q
Sbjct: 162 SKTLLVSMFNTQYDVSAAAQITPMIVYQIFGNYGSVQKIVVLPKNESSQRNHNRVQALVQ 221
Query: 183 YPDVQTAVVAKEALEGH--CIYDGGFCKLHISYSRHTDL 219
+ TA K L+G I D L I +SR D+
Sbjct: 222 FDSKVTAENVKSILQGQPVTIGDTVTFTLDIQFSRMDDI 260
>gi|440793956|gb|ELR15127.1| protein kinase domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 515
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 18/108 (16%)
Query: 136 SNVLLASIENMQYAV---TLDVLHMVFSAFGPVQKIAMFD-----------KNGGLQALI 181
+ +LL +++ Q V T D++ +FS++G ++KI + + ++ LQ L+
Sbjct: 250 NRILLVTLQTEQEPVIPITADIVWQIFSSYGFIEKIVVMNRQSQEYAEESRRDSRLQTLV 309
Query: 182 QYPDVQTAVVAKEALEGHCIYDGG----FCKLHISYSRHTDLSIKVNN 225
Q+ +A A + L G +Y G L I YS T L++K N+
Sbjct: 310 QFSSPASAQTASQYLNGKTVYVGTDPIMSITLFIQYSHLTQLTVKHNS 357
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 25 HVFSAFGFVHKITTF-----------EKTAGFQALVQFSDTETASSAKNALDGRSIPRYL 73
+FS++GF+ KI + + Q LVQFS +A +A L+G+++ Y+
Sbjct: 274 QIFSSYGFIEKIVVMNRQSQEYAEESRRDSRLQTLVQFSSPASAQTASQYLNGKTV--YV 331
Query: 74 LPENMGPCTLRITYSAHTDLSVKFQS 99
+ + TL I YS T L+VK S
Sbjct: 332 GTDPIMSITLFIQYSHLTQLTVKHNS 357
>gi|341889641|gb|EGT45576.1| hypothetical protein CAEBREN_06918 [Caenorhabditis brenneri]
Length = 348
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 143 IENMQYAVTLDVLHMVFSAFGPVQKIAMF-DKNGGL---QALIQYPDVQTAVVAKEALEG 198
+ N+ Y VT D + +FS GPV I M D+ G I++PD+QTA A L G
Sbjct: 21 VGNISYDVTEDTIRAMFSKAGPVMSIKMVHDRETGKPKGYGFIEFPDIQTADTAIRVLNG 80
Query: 199 HCI 201
H +
Sbjct: 81 HEL 83
>gi|222616398|gb|EEE52530.1| hypothetical protein OsJ_34752 [Oryza sativa Japonica Group]
Length = 555
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL ++ + Y VT +VLH V+ +G V + ++AL+ + A A+ A
Sbjct: 42 VLRVTVSQIIYPVTSEVLHQVYDTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSATH 101
Query: 198 GHCIYDGGFCKLHISY 213
G IYDGG C L + +
Sbjct: 102 GRDIYDGG-CLLDVQH 116
>gi|340056209|emb|CCC50538.1| putative RNA-binding protein [Trypanosoma vivax Y486]
Length = 314
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 22/113 (19%)
Query: 136 SNVLLASIENMQYAVTLD------VLHMVFSAFGPVQKIAMFDKN-------GGLQALIQ 182
S LL S+ N QY V+ +++ +F+ +G VQKI + KN +QAL+Q
Sbjct: 166 SKTLLVSMFNTQYDVSAAAQINPMIVYQIFANYGAVQKIVVLPKNESSQRNHNRVQALVQ 225
Query: 183 YPDVQTAVVAKEALEGHCIYDGGFC--KLHISYSRHTD-------LSIKVNND 226
+ TA K L+G + G L I +SR D +S+ +N D
Sbjct: 226 FDSKATAENVKNILQGQPVTIGETVTFTLDIQFSRMDDIKTSNPAISLVINED 278
>gi|149050609|gb|EDM02782.1| heterogeneous nuclear ribonucleoprotein L-like (predicted), isoform
CRA_a [Rattus norvegicus]
Length = 261
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQAL 180
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA+
Sbjct: 215 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAM 258
>gi|218191723|gb|EEC74150.1| hypothetical protein OsI_09231 [Oryza sativa Indica Group]
Length = 609
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL ++ + Y VT +VLH V+ +G V + ++AL+ + A A+ A
Sbjct: 56 VLRVTVSQIIYPVTYEVLHQVYDTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSATH 115
Query: 198 GHCIYDGGFCKLHISY 213
G IYDGG C L + +
Sbjct: 116 GRDIYDGG-CLLDVQH 130
>gi|431912753|gb|ELK14771.1| Heterogeneous nuclear ribonucleoprotein L-like protein [Pteropus
alecto]
Length = 484
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQAL 180
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA+
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAM 209
>gi|198459570|ref|XP_001361426.2| GA21622 [Drosophila pseudoobscura pseudoobscura]
gi|198136733|gb|EAL26004.2| GA21622 [Drosophila pseudoobscura pseudoobscura]
Length = 369
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 14/109 (12%)
Query: 180 LIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPM 238
++++ ++ A A+E L G IY G C L I Y++ L++ N D S DYTL +
Sbjct: 1 MVEFDNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTGKS 59
Query: 239 VNSQPS---ILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGW 284
+ S P +L QP P++G GA F PP P H T W
Sbjct: 60 LFSIPENVVMLESQP-PLLGP------GAAF--PPFGAPEYHPTTPDNW 99
>gi|226470154|emb|CAX70358.1| Polypyrimidine tract-binding protein 1 [Schistosoma japonicum]
Length = 474
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 157 MVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY--DGGFCKLHISYS 214
M F FG + ++ F KN A +++ + +A VAK + G ++ + F L +S
Sbjct: 177 MAFKPFGRILRVVSFKKNDSRHAFLEFSNSLSAHVAKLLMNGVPLFPMECNFHILRTEFS 236
Query: 215 RHTDLSIKVNNDRSRDY 231
R + L I ++ SRD+
Sbjct: 237 RQSTLEIHREDNSSRDF 253
>gi|71003490|ref|XP_756415.1| hypothetical protein UM00268.1 [Ustilago maydis 521]
gi|46095793|gb|EAK81026.1| hypothetical protein UM00268.1 [Ustilago maydis 521]
Length = 2031
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 16/198 (8%)
Query: 20 SGERAHVFSAFGFVHKITTF-EKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENM 78
S + H+FS +G + + EK+ F + ++D A A+ + GR R L +
Sbjct: 555 SSDLVHIFSRYGSIETVRLVPEKSCAF---INYADLADAVRAREDVFGRMNGRLGLG-TI 610
Query: 79 GP-CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 137
GP +R+ + L Q+ T AP +DA VG +G EP
Sbjct: 611 GPEGQVRVGFGKPESLP---QAGFGLFATASDTTGAP--LDAYTSEVVGTEGGNQEPSRA 665
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
+ + SI + + +++ L +F+ FGP++ + + A I Y + A+VA++ L
Sbjct: 666 LWIGSIPS---STSIETLISIFAPFGPIESVRVLASKSC--AFINYERLDDAMVARQTLH 720
Query: 198 GHCIYDGGFCKLHISYSR 215
G + + I +++
Sbjct: 721 GRDVLGAELGPVRIGFAK 738
>gi|222623816|gb|EEE57948.1| hypothetical protein OsJ_08670 [Oryza sativa Japonica Group]
Length = 353
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL ++ + Y VT +VLH V++ +G V + ++AL+ + A A+ A
Sbjct: 157 VLRVTVSQIIYPVTSEVLHQVYNTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSATH 216
Query: 198 GHCIYDGGFCKLHISY 213
G IYDGG C + + +
Sbjct: 217 GRDIYDGG-CLMDVQH 231
>gi|145547070|ref|XP_001459217.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427041|emb|CAK91820.1| unnamed protein product [Paramecium tetraurelia]
Length = 647
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 134 PESNVLLASIENM-QYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVA 192
P +NV+L I N ++ D VFS FG +Q++ +F+++ + +++ + ++A+ A
Sbjct: 12 PRTNVILVVITNKANKTLSHDKYFKVFSPFGTIQRMLIFERSLTWKTFVEFDNPESALKA 71
Query: 193 KEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 232
+ + D +++ S+ T ++ + NN DYT
Sbjct: 72 RSQMNDKFFCDDNTLLMNVYASKLTYITFQENNTGGVDYT 111
>gi|76157413|gb|AAX28348.2| SJCHGC04555 protein [Schistosoma japonicum]
Length = 304
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 157 MVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY--DGGFCKLHISYS 214
M F FG + ++ F KN A +++ + +A VAK + G ++ + F L +S
Sbjct: 177 MAFKPFGRILRVVSFKKNDSRHAFLEFSNSLSAHVAKLLMNGVPLFPMECNFHILRTEFS 236
Query: 215 RHTDLSIKVNNDRSRDY 231
R + L I ++ SRD+
Sbjct: 237 RQSTLEIHREDNSSRDF 253
>gi|426195143|gb|EKV45073.1| hypothetical protein AGABI2DRAFT_144580 [Agaricus bisporus var.
bisporus H97]
Length = 404
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 113 APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD 172
A SA+ S L +G +P +L++ + ++ ++ T D L +F +GP++K+ +
Sbjct: 223 AQSALPGSTDLDLGSYATSADPTPTLLVSKLPSIIFSSTQD-LEPLFYPYGPLKKLRVIG 281
Query: 173 K--NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSR 215
NG L L QY A AKEAL G + C++ + + R
Sbjct: 282 AGLNGTLSVLAQYSSSSAAQEAKEALHGQNYIN---CQVEVQFLR 323
>gi|2288985|gb|AAB64314.1| hypothetical protein [Arabidopsis thaliana]
Length = 1056
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 13/143 (9%)
Query: 154 VLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 213
+LH FG ++++ + AL+++ + A KE L+G + ++ I Y
Sbjct: 379 ILHNAMILFGEIERVKSYPSRNF--ALVEFRSAEEARQCKEGLQGRLFNNP---RIKIMY 433
Query: 214 S------RHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG--QQPVPMVGATANQYNGAQ 265
S D S RSR + P S P G P+ G YNGA+
Sbjct: 434 SNDELPPEQDDTSFYSGMKRSRTDMFNNDPSFVSSPHSTGIPGSMRPLRGTNERSYNGAE 493
Query: 266 FAPPPPEQPMMHQPTAAGWGAVP 288
+ ++P +P+A G G +P
Sbjct: 494 YNDVVGKEPNWRRPSANGTGILP 516
>gi|61661314|gb|AAX51263.1| FPA [Arabidopsis thaliana]
Length = 1056
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 13/143 (9%)
Query: 154 VLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 213
+LH FG ++++ + AL+++ + A KE L+G + ++ I Y
Sbjct: 379 ILHNAMILFGEIERVKSYPSRNF--ALVEFRSAEEARQCKEGLQGRLFNNP---RIKIMY 433
Query: 214 S------RHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG--QQPVPMVGATANQYNGAQ 265
S D S RSR + P S P G P+ G YNGA+
Sbjct: 434 SNDELPPEQDDTSFYSGMKRSRTDMFNNDPSFVSSPHSTGIPGSMRPLRGTNERSYNGAE 493
Query: 266 FAPPPPEQPMMHQPTAAGWGAVP 288
+ ++P +P+A G G +P
Sbjct: 494 YNDVVGKEPNWRRPSANGTGLLP 516
>gi|317142939|ref|XP_001819205.2| pre-mRNA branch site p14-like protein [Aspergillus oryzae RIB40]
Length = 146
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 130 KKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM-FDKNGGLQALIQYPDVQT 188
+KL PE+N +L ++N+ Y VT + L +F FGP+++I N A + Y DV
Sbjct: 36 RKLAPEANRILF-VKNLNYNVTAEQLFDLFGKFGPIRQIRQGIANNSKGTAFVVYEDVHD 94
Query: 189 AVVAKEALEG 198
A A + L G
Sbjct: 95 AKQACDKLNG 104
>gi|20453185|gb|AAM19833.1| At2g43410/T1O24.15 [Arabidopsis thaliana]
gi|27764946|gb|AAO23594.1| At2g43410/T1O24.15 [Arabidopsis thaliana]
Length = 901
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 13/143 (9%)
Query: 154 VLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 213
+LH FG ++++ + AL+++ + A KE L+G + ++ I Y
Sbjct: 224 ILHNAMILFGEIERVKSYPSRNF--ALVEFRSAEEARQCKEGLQGRLFNN---PRIKIMY 278
Query: 214 S------RHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG--QQPVPMVGATANQYNGAQ 265
S D S RSR + P S P G P+ G YNGA+
Sbjct: 279 SNDELPPEQDDTSFYSGMKRSRTDMFNNDPSFVSSPHSTGIPGSMRPLRGTNERSYNGAE 338
Query: 266 FAPPPPEQPMMHQPTAAGWGAVP 288
+ ++P +P+A G G +P
Sbjct: 339 YNDVVGKEPNWRRPSANGTGILP 361
>gi|145331109|ref|NP_001078046.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|145331111|ref|NP_001078047.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|145331113|ref|NP_001078048.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|290463421|sp|Q8LPQ9.2|FPA_ARATH RecName: Full=Flowering time control protein FPA
gi|330255169|gb|AEC10263.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|330255170|gb|AEC10264.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|330255171|gb|AEC10265.1| Flowering time control protein FPA [Arabidopsis thaliana]
Length = 901
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 13/143 (9%)
Query: 154 VLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 213
+LH FG ++++ + AL+++ + A KE L+G + ++ I Y
Sbjct: 224 ILHNAMILFGEIERVKSYPSRNF--ALVEFRSAEEARQCKEGLQGRLFNN---PRIKIMY 278
Query: 214 S------RHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG--QQPVPMVGATANQYNGAQ 265
S D S RSR + P S P G P+ G YNGA+
Sbjct: 279 SNDELPPEQDDTSFYSGMKRSRTDMFNNDPSFVSSPHSTGIPGSMRPLRGTNERSYNGAE 338
Query: 266 FAPPPPEQPMMHQPTAAGWGAVP 288
+ ++P +P+A G G +P
Sbjct: 339 YNDVVGKEPNWRRPSANGTGILP 361
>gi|47497054|dbj|BAD19106.1| unknown protein [Oryza sativa Japonica Group]
gi|47497776|dbj|BAD19876.1| unknown protein [Oryza sativa Japonica Group]
Length = 430
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL ++ + Y VT +VLH V++ +G V + ++AL+ + A A+ A
Sbjct: 56 VLRVTVSQIIYPVTSEVLHQVYNTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSATH 115
Query: 198 GHCIYDGGFCKLHISY 213
G IYDGG C + + +
Sbjct: 116 GRDIYDGG-CLMDVQH 130
>gi|125535222|gb|EAY81770.1| hypothetical protein OsI_36944 [Oryza sativa Indica Group]
Length = 1325
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL ++ + Y VT +VLH V+ +G V + ++AL+ + A A+ A
Sbjct: 781 VLRVTVSQIIYPVTSEVLHQVYDTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSATH 840
Query: 198 GHCIYDGGFCKLHISY 213
G IYDGG C L + +
Sbjct: 841 GRDIYDGG-CLLDVQH 855
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL ++ + Y VT +VLH V+ +G V + ++AL+ + A+ A
Sbjct: 42 VLRVTVSQIIYPVTSEVLHQVYDTYGAVAVQVLAVSTWQVKALVSFMSSHDVERARSATH 101
Query: 198 GHCIYDGGFCKLHISY 213
G IYDGG C L + +
Sbjct: 102 GRDIYDGG-CLLDVQH 116
>gi|222423512|dbj|BAH19726.1| AT2G43410 [Arabidopsis thaliana]
Length = 901
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 13/143 (9%)
Query: 154 VLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 213
+LH FG ++++ + AL+++ + A KE L+G + ++ I Y
Sbjct: 224 ILHNAMILFGEIERVKSYPSRNF--ALVEFRSAEEARQCKEGLQGRLFNN---PRIKIMY 278
Query: 214 S------RHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG--QQPVPMVGATANQYNGAQ 265
S D S RSR + P S P G P+ G YNGA+
Sbjct: 279 SNDGLPPEQDDTSFYSGMKRSRTDMFNNDPSFVSSPHSTGIPGSMRPLRGTNERSYNGAE 338
Query: 266 FAPPPPEQPMMHQPTAAGWGAVP 288
+ ++P +P+A G G +P
Sbjct: 339 YNDVVGKEPNWRRPSANGTGILP 361
>gi|358341535|dbj|GAA29842.2| polypyrimidine tract-binding protein 1, partial [Clonorchis
sinensis]
Length = 520
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 18/165 (10%)
Query: 93 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 151
L ++F H+ + + + + +A+ + L G ++VL I+ M +
Sbjct: 26 LIMQFSKHQHLELMSENSQIVEAINNANCIVQQDLSGANSGVPNSVLRVIIDYIMGQQIN 85
Query: 152 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK------------EALEGH 199
+LH +F +G + +I F KN LI++ + A VA + L G
Sbjct: 86 HTILHKIFYRYGKILRIITFPKNNQYHGLIEFENHIHAFVAMLVSVGLTKRHSPKHLNGQ 145
Query: 200 CIYDGGFCKLHISYSRHTD-LSIKVNNDRSRDYT---LPSTPMVN 240
IY G C L + +S++ L ++ +D+ RDY L +VN
Sbjct: 146 NIYTGC-CSLLVEFSKNRGPLEVRHESDKCRDYINNPLTEEELVN 189
>gi|452001712|gb|EMD94171.1| hypothetical protein COCHEDRAFT_1020240 [Cochliobolus
heterostrophus C5]
Length = 325
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 130 KKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQ---ALIQYPDV 186
K +EP NVL I N+ Y VT D L VFS FG ++ + M N GL A ++Y +V
Sbjct: 130 KNIEPH-NVLY--IGNLYYEVTPDQLKRVFSRFGDIESVRMVYDNRGLSRGFAYVEYKNV 186
Query: 187 QTAVVAKEALEGHCIYDG 204
A A + L+ +++G
Sbjct: 187 SDAQAAIDNLDMQ-VFEG 203
>gi|67900938|ref|XP_680725.1| hypothetical protein AN7456.2 [Aspergillus nidulans FGSC A4]
gi|40742846|gb|EAA62036.1| hypothetical protein AN7456.2 [Aspergillus nidulans FGSC A4]
gi|259483762|tpe|CBF79417.1| TPA: pre-mRNA branch site protein p14, putative (AFU_orthologue;
AFUA_2G05960) [Aspergillus nidulans FGSC A4]
Length = 172
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM-FDKNGGLQALIQYPDVQ 187
+KL PE+N +L ++N+ Y VT + L +F FGP+++I N A + Y DV
Sbjct: 61 SRKLAPEANRILF-VKNLNYNVTAEQLFDLFGKFGPIRQIRQGIANNSKGTAFVVYEDVH 119
Query: 188 TAVVAKEALEG 198
A A + L G
Sbjct: 120 DAKQACDKLNG 130
>gi|297600029|ref|NP_001048354.2| Os02g0789700 [Oryza sativa Japonica Group]
gi|255671306|dbj|BAF10268.2| Os02g0789700, partial [Oryza sativa Japonica Group]
Length = 451
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL ++ + Y VT +VLH V++ +G V + ++AL+ + A A+ A
Sbjct: 77 VLRVTVSQIIYPVTSEVLHQVYNTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSATH 136
Query: 198 GHCIYDGGFCKLHISY 213
G IYDGG C + + +
Sbjct: 137 GRDIYDGG-CLMDVQH 151
>gi|145529570|ref|XP_001450568.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418190|emb|CAK83171.1| unnamed protein product [Paramecium tetraurelia]
Length = 600
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 136 SNVLLASIENMQYAVTL--DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 193
+NV+L I N + TL D VFS FG +Q++ +F+++ + +++ + ++A+ A+
Sbjct: 6 TNVILVVITN-KANKTLGHDKYFKVFSQFGTIQRMLIFERSLTWKTFVEFDNPESAIKAR 64
Query: 194 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 233
+ + D +++ S+ T ++ + NN DYTL
Sbjct: 65 QVMNDKPFCDDSQLMMNVYASKLTYITFQENNTGGVDYTL 104
>gi|440803034|gb|ELR23948.1| RNA recognition domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 440
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 143 IENMQYAVTLDVLHMVFSAFGPVQKIAMFD--KNGGLQ--ALIQYPDVQTAVVAKEALEG 198
I N+ + T L V S FG V+++ F+ +NG + AL++Y D + + AKE L+G
Sbjct: 62 IGNLTWWTTDQDLEDVCSQFGKVKQVKFFENKQNGRSKGYALVEYYDAEASRQAKEKLQG 121
Query: 199 HCIYD 203
+ I+D
Sbjct: 122 YTIHD 126
>gi|226489711|emb|CAX75006.1| Polypyrimidine tract-binding protein 1 [Schistosoma japonicum]
Length = 351
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 157 MVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY--DGGFCKLHISYS 214
M F FG + ++ F KN A +++ + +A VAK + G ++ + F L +S
Sbjct: 177 MAFKPFGRILRVVSFKKNDSRHAFLEFSNSLSAHVAKLLMNGVPLFPMEYNFHILRTEFS 236
Query: 215 RHTDLSIKVNNDRSRDYT 232
R + L I ++ SRD+
Sbjct: 237 RQSTLEIHREDNSSRDFV 254
>gi|258574487|ref|XP_002541425.1| pre-mRNA branch site protein p14 [Uncinocarpus reesii 1704]
gi|237901691|gb|EEP76092.1| pre-mRNA branch site protein p14 [Uncinocarpus reesii 1704]
Length = 115
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 131 KLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM-FDKNGGLQALIQYPDVQTA 189
KL PE+N +L ++N+ Y VT D L +F FGP+++I N A + Y DV A
Sbjct: 6 KLAPEANRILF-VKNLSYNVTADELFDLFGKFGPIRQIRQGIAANSKGTAFVVYEDVHDA 64
Query: 190 VVAKEALEG 198
A + L G
Sbjct: 65 KQACDKLNG 73
>gi|118381836|ref|XP_001024078.1| polypyrimidine tract binding protein, putative [Tetrahymena
thermophila]
gi|89305845|gb|EAS03833.1| polypyrimidine tract binding protein, putative [Tetrahymena
thermophila SB210]
Length = 1213
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 11/115 (9%)
Query: 113 APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTL-DVLHMVFSAFGPVQKIAMF 171
+ S ID QLS G+ K VLL ++N Q V ++ FS FG V++I +F
Sbjct: 209 SSSKID---QLSKGIRPSK------VLLVMVQNPQDEVIEHRIIFEKFSFFGEVEQILIF 259
Query: 172 DKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGF-CKLHISYSRHTDLSIKVNN 225
K + + ++ A+ AK ALE I K+ + +S +L +K N
Sbjct: 260 SKKQPWKLFVDMNSIEVAIKAKNALENSSICVNNLELKMKVQFSSQQNLVLKNGN 314
>gi|145482375|ref|XP_001427210.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394290|emb|CAK59812.1| unnamed protein product [Paramecium tetraurelia]
Length = 655
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 134 PESNVLLASIENM-QYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVA 192
P +NV+L I N ++ D VFS FG +Q++ +F+++ + +++ + +A+ A
Sbjct: 12 PRTNVILVVITNKANKTLSHDKYFKVFSPFGTIQRMLIFERSLTWKTFVEFDNPDSALKA 71
Query: 193 KEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 232
+ + D +++ S+ T ++ + NN DYT
Sbjct: 72 RSQMNDKFFCDDNTLLMNVYASKLTYITFQENNTGGVDYT 111
>gi|121715254|ref|XP_001275236.1| pre-mRNA branch site protein p14, putative [Aspergillus clavatus
NRRL 1]
gi|238501940|ref|XP_002382204.1| hypothetical protein AFLA_130110 [Aspergillus flavus NRRL3357]
gi|83767063|dbj|BAE57203.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|119403393|gb|EAW13810.1| pre-mRNA branch site protein p14, putative [Aspergillus clavatus
NRRL 1]
gi|220692441|gb|EED48788.1| hypothetical protein AFLA_130110 [Aspergillus flavus NRRL3357]
gi|391863731|gb|EIT73031.1| putative RNA-binding protein [Aspergillus oryzae 3.042]
Length = 113
Score = 41.6 bits (96), Expect = 0.61, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 130 KKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM-FDKNGGLQALIQYPDVQT 188
+KL PE+N +L ++N+ Y VT + L +F FGP+++I N A + Y DV
Sbjct: 3 RKLAPEANRILF-VKNLNYNVTAEQLFDLFGKFGPIRQIRQGIANNSKGTAFVVYEDVHD 61
Query: 189 AVVAKEALEG 198
A A + L G
Sbjct: 62 AKQACDKLNG 71
>gi|350635238|gb|EHA23600.1| hypothetical protein ASPNIDRAFT_138217 [Aspergillus niger ATCC
1015]
Length = 112
Score = 41.6 bits (96), Expect = 0.61, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 130 KKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM-FDKNGGLQALIQYPDVQT 188
+KL PE+N +L ++N+ Y VT + L +F FGP+++I N A + Y DV
Sbjct: 4 RKLAPEANRILF-VKNLNYNVTAEQLFDLFGKFGPIRQIRQGIANNSKGTAFVVYEDVHD 62
Query: 189 AVVAKEALEG 198
A A + L G
Sbjct: 63 AKQACDKLNG 72
>gi|115400751|ref|XP_001215964.1| pre-mRNA branch site protein p14 [Aspergillus terreus NIH2624]
gi|119480377|ref|XP_001260217.1| pre-mRNA branch site protein p14, putative [Neosartorya fischeri
NRRL 181]
gi|114191630|gb|EAU33330.1| pre-mRNA branch site protein p14 [Aspergillus terreus NIH2624]
gi|119408371|gb|EAW18320.1| pre-mRNA branch site protein p14, putative [Neosartorya fischeri
NRRL 181]
gi|134057510|emb|CAK48864.1| unnamed protein product [Aspergillus niger]
gi|358367610|dbj|GAA84228.1| pre-mRNA branch site protein p14 [Aspergillus kawachii IFO 4308]
Length = 113
Score = 41.6 bits (96), Expect = 0.61, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 130 KKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM-FDKNGGLQALIQYPDVQT 188
+KL PE+N +L ++N+ Y VT + L +F FGP+++I N A + Y DV
Sbjct: 3 RKLAPEANRILF-VKNLNYNVTAEQLFDLFGKFGPIRQIRQGIANNSKGTAFVVYEDVHD 61
Query: 189 AVVAKEALEG 198
A A + L G
Sbjct: 62 AKQACDKLNG 71
>gi|241631201|ref|XP_002410244.1| heterogeneous nuclear ribonucleoprotein L, putative [Ixodes
scapularis]
gi|215503358|gb|EEC12852.1| heterogeneous nuclear ribonucleoprotein L, putative [Ixodes
scapularis]
Length = 97
Score = 41.6 bits (96), Expect = 0.62, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALI 181
G++ E ++VLL +I N Y +T+DV+H + + G V +I +F KN G+QA++
Sbjct: 27 GQEEEKPNHVLLMTILNPAYPITVDVIHTISTPSGKVMRIVIFKKN-GVQAMV 78
>gi|383856703|ref|XP_003703847.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Megachile rotundata]
Length = 421
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 183 YPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 235
+ V++A AKE L G IY G C L I +++ T L++ N+ S DYT P+
Sbjct: 31 FDSVESATRAKETLHGADIY-SGCCTLKIDFAKPTKLNVYKNDAESWDYTTPT 82
>gi|317028095|ref|XP_001400564.2| pre-mRNA branch site p14-like protein [Aspergillus niger CBS
513.88]
Length = 122
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 130 KKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM-FDKNGGLQALIQYPDVQT 188
+KL PE+N +L ++N+ Y VT + L +F FGP+++I N A + Y DV
Sbjct: 12 RKLAPEANRILF-VKNLNYNVTAEQLFDLFGKFGPIRQIRQGIANNSKGTAFVVYEDVHD 70
Query: 189 AVVAKEALEG 198
A A + L G
Sbjct: 71 AKQACDKLNG 80
>gi|218191477|gb|EEC73904.1| hypothetical protein OsI_08733 [Oryza sativa Indica Group]
Length = 219
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL ++ + Y VT +VLH V+ +G V + ++AL+ + A+ A
Sbjct: 42 VLRVTVSQIIYPVTYEVLHQVYDTYGAVAVQVLAVSTWQVKALVSFMSSHDVERARSATH 101
Query: 198 GHCIYDGGFCKLHISY 213
G IYDGG C L + +
Sbjct: 102 GRDIYDGG-CLLDVQH 116
>gi|119193232|ref|XP_001247222.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|320040131|gb|EFW22065.1| pre-mRNA branch site protein p14 [Coccidioides posadasii str.
Silveira]
gi|392863538|gb|EAS35707.2| pre-mRNA branch site protein p14 [Coccidioides immitis RS]
Length = 115
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 131 KLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM-FDKNGGLQALIQYPDVQTA 189
KL PE+N +L ++N+ Y VT D L +F FGP+++I N A + Y DV A
Sbjct: 6 KLAPEANRILF-VKNLSYNVTADDLFDLFGKFGPIRQIRQGIAANSKGTAFVVYEDVHDA 64
Query: 190 VVAKEALEG 198
A + L G
Sbjct: 65 KQACDKLNG 73
>gi|148222234|ref|NP_001080089.1| U1 small nuclear ribonucleoprotein A [Xenopus laevis]
gi|27924189|gb|AAH44979.1| Snf protein [Xenopus laevis]
Length = 282
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 76/205 (37%), Gaps = 57/205 (27%)
Query: 143 IENMQYAVTLD----VLHMVFSAFGPVQKIAMFDKNGGL--QALIQYPDVQTAVVAKEAL 196
I N+ + D L+ +FS FG + I + +N + QA + + + +A A ++
Sbjct: 14 INNLNEKIKKDELKKSLYAIFSQFGQILDI-LVSRNLKMRGQAFVIFKETSSATNALRSM 72
Query: 197 EGHCIYDGGFCKLHISYSR-HTDLSIK-----VNNDRSRDYTLPSTPMVNSQPSILGQQP 250
+G YD + I YS+ +D+ K V DR R +
Sbjct: 73 QGFPFYD---KPMRIQYSKTDSDIIAKMKGTFVERDRKRQEKR--------------KVK 115
Query: 251 VPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPM 310
VP V N GA P P Q A Q+MP M P M
Sbjct: 116 VPEVQGVKNAMPGAALLPGVPGQM--------------AAMQNMPGMTQAPRM------- 154
Query: 311 GPGMMQMHMPGQSGMQHHHGAMPPP 335
MHM GQ+ HH G MPPP
Sbjct: 155 ------MHMAGQAPYMHHPGMMPPP 173
>gi|1173326|sp|P45429.1|SNRPA_XENLA RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A
gi|65181|emb|CAA41021.1| U1 A protein [Xenopus laevis]
Length = 282
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 75/205 (36%), Gaps = 57/205 (27%)
Query: 143 IENMQYAVTLD----VLHMVFSAFGPVQKIAMFDKNGGL--QALIQYPDVQTAVVAKEAL 196
I N+ + D L+ +FS FG + I + +N + QA + + + +A A ++
Sbjct: 14 INNLNEKIKKDELKKSLYAIFSQFGQILDI-LVSRNLKMRGQAFVIFKETSSATNALRSM 72
Query: 197 EGHCIYDGGFCKLHISYSR-HTDLSIK-----VNNDRSRDYTLPSTPMVNSQPSILGQQP 250
+G YD + I YS+ +D+ K V DR R +
Sbjct: 73 QGFPFYD---KPMRIQYSKTDSDIIAKMKGTFVERDRKRQEKR--------------KVK 115
Query: 251 VPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPM 310
VP V N GA P P Q A Q MP M P M
Sbjct: 116 VPEVQGVKNAMPGAALLPGVPGQM--------------AAMQDMPGMTQAPRM------- 154
Query: 311 GPGMMQMHMPGQSGMQHHHGAMPPP 335
MHM GQ+ HH G MPPP
Sbjct: 155 ------MHMAGQAPYMHHPGMMPPP 173
>gi|409076329|gb|EKM76701.1| hypothetical protein AGABI1DRAFT_130995 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 404
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 113 APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD 172
A SA S L +G +P +L++ + ++ ++ T D L +F +GP++K+ +
Sbjct: 223 AQSARPGSTDLDLGSYATSADPTPTLLVSKLPSIIFSSTQD-LEPLFYPYGPLKKLRVIG 281
Query: 173 K--NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSR 215
NG L L QY A AKEAL G + C++ + + R
Sbjct: 282 AGLNGTLSVLAQYSSSSAAQEAKEALHGQNYIN---CQVEVQFLR 323
>gi|77553984|gb|ABA96780.1| hypothetical protein LOC_Os12g12190 [Oryza sativa Japonica Group]
Length = 800
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL ++ + Y VT +VLH V+ +G V + ++AL+ + A A+
Sbjct: 63 VLCVTVSQIIYPVTSEVLHQVYDTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSTTH 122
Query: 198 GHCIYDGGFCKLHISY 213
GH IYD G C L + +
Sbjct: 123 GHDIYDEG-CLLDMQH 137
>gi|440300872|gb|ELP93319.1| hypothetical protein EIN_057040 [Entamoeba invadens IP1]
Length = 373
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 16/173 (9%)
Query: 29 AFGFVHKITTFEKTAG--FQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRIT 86
FG +++I + Q+LV+F+D T A L +P + CT+R
Sbjct: 29 TFGPINRIIRMNSNSSEQVQSLVEFTDRMTCEKAIEYLKVNPLP-------VLKCTVRAE 81
Query: 87 YSAHTDLSVKFQSHRSRDY-TNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLA-SIE 144
T L++ + +RDY TNP P P AS Q S + E ++ VL+ +
Sbjct: 82 IGNATRLNIHTDTAHARDYTTNPRYPSEPKT--ASRQ-STNRNINMEEYKTKVLMVHDLP 138
Query: 145 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
T L+ +FS FG + K+ + A++++ Q A A E LE
Sbjct: 139 KNLVPETAYHLYNMFSLFGSISKVNVLSSKDT--AMVEFETYQQAHKALEILE 189
>gi|297728967|ref|NP_001176847.1| Os12g0223500 [Oryza sativa Japonica Group]
gi|222616825|gb|EEE52957.1| hypothetical protein OsJ_35600 [Oryza sativa Japonica Group]
gi|255670154|dbj|BAH95575.1| Os12g0223500 [Oryza sativa Japonica Group]
Length = 297
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 138 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 197
VL ++ + Y VT +VLH V+ +G V + ++AL+ + A A+
Sbjct: 63 VLCVTVSQIIYPVTSEVLHQVYDTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSTTH 122
Query: 198 GHCIYDGGFCKLHISY 213
GH IYD G C L + +
Sbjct: 123 GHDIYDEG-CLLDMQH 137
>gi|354508326|ref|XP_003516204.1| PREDICTED: polypyrimidine tract-binding protein 1-like, partial
[Cricetulus griseus]
Length = 214
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 129 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKI 168
G + +S VL +EN+ Y VTLDVL+ +FS FG V KI
Sbjct: 173 GMAMAGQSPVLRVLVENLFYPVTLDVLNQIFSKFGTVVKI 212
>gi|297828039|ref|XP_002881902.1| hypothetical protein ARALYDRAFT_483451 [Arabidopsis lyrata subsp.
lyrata]
gi|297327741|gb|EFH58161.1| hypothetical protein ARALYDRAFT_483451 [Arabidopsis lyrata subsp.
lyrata]
Length = 902
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 110/280 (39%), Gaps = 51/280 (18%)
Query: 27 FSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLRIT 86
FS FG + + A + + + + A AK +++G+ MG LR+
Sbjct: 115 FSKFGKIEDFRFLRERK--TAFIDYYEMDDALQAK-SMNGK---------RMGGSFLRVD 162
Query: 87 YSAHTDLSVKFQ---SHRSRDYTNPYLPVAPSAIDASGQLSVGLDGK-KLEPESNVLLAS 142
+ + K Q S+ +R+ + P P + D DGK ++P + +
Sbjct: 163 F-LRSQAPRKEQWAGSYDNRNGNMNHKPQHPHSYD---------DGKGDVQPSKVLWIGY 212
Query: 143 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 202
N +LH +G +++I + + +L+++ + A AKE ++G
Sbjct: 213 PPNATQCNDEQMLHNAMILYGEIERIKCYPSSHF--SLVEFRSAEEARHAKEGIQGRLFN 270
Query: 203 DGGFCKLHISYSRHT------DLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ-------- 248
+ ++ I YS D S RSR T M N+ PS +
Sbjct: 271 N---PRIKIMYSNDELPPEPDDTSFYSGMKRSR------TDMFNNDPSFISSPHSTGIPG 321
Query: 249 QPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVP 288
P+ G+ YNG+++ ++P +P+A G G +P
Sbjct: 322 SMRPLRGSNERSYNGSEYNDVVGKEPNWRRPSANGTGILP 361
>gi|358337425|dbj|GAA28121.2| regulator of differentiation 1 [Clonorchis sinensis]
Length = 757
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 25 HVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYLLPENMGPCTLR 84
++F+ FG + +I TF+ A ++F +A A DG + P + GPC +R
Sbjct: 346 NLFAQFGTILRIVTFKTGTVPSAFIEFQSPISAHVAVLQTDGANFTLEEAPGS-GPCIMR 404
Query: 85 ITYSAHTDLSVKFQSHRSRDYTNPYLP 111
+S + + V+ + RD+T +P
Sbjct: 405 TDFSRQSTVEVRSEDANCRDFTRNPMP 431
>gi|115442121|ref|NP_001045340.1| Os01g0938200 [Oryza sativa Japonica Group]
gi|20160777|dbj|BAB89718.1| putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|20161317|dbj|BAB90241.1| putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|113534871|dbj|BAF07254.1| Os01g0938200 [Oryza sativa Japonica Group]
gi|215704529|dbj|BAG94162.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189701|gb|EEC72128.1| hypothetical protein OsI_05123 [Oryza sativa Indica Group]
gi|222619840|gb|EEE55972.1| hypothetical protein OsJ_04706 [Oryza sativa Japonica Group]
Length = 460
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 78/188 (41%), Gaps = 28/188 (14%)
Query: 150 VTLDVLHMVFSAFGPVQKIAMFDKNGGLQ------ALIQYPDVQTAVVAKEALEGHCIYD 203
VT L +FS +G ++ + + G Q A ++Y + AV A EAL G +
Sbjct: 139 VTDTELTDLFSKYGNIKDLQIL--RGSQQTSKAGCAFLKYETKEQAVAAIEALNGKHKIE 196
Query: 204 GGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATAN---- 259
G L + ++ D + +++ L S+ M ++ P Q + GA
Sbjct: 197 GSSVPLVVKWA---DTEKERQARKAQKAQLQSSNMPSASP----MQQSSLFGALQMGYMP 249
Query: 260 QYNGAQFAPPP-------PEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMGP 312
QYNG + PP P PM +Q T V P +Q + G +P + P S+P
Sbjct: 250 QYNGFGYQPPGTYGLMQYPLSPMQNQATFPNM--VQPVNQGNSIRGVNPELSPNSVPRSF 307
Query: 313 GMMQMHMP 320
MQ+ P
Sbjct: 308 NAMQLSSP 315
>gi|307694571|gb|ADN84938.1| hephaestus [Biston betularia]
Length = 181
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 136 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN 174
+ VL IE+M Y + LDVL+ +F +G V KI F KN
Sbjct: 142 NTVLRVIIEHMLYPIVLDVLYSIFQRYGKVLKIVTFTKN 180
>gi|118368089|ref|XP_001017254.1| hypothetical protein TTHERM_00196000 [Tetrahymena thermophila]
gi|89299021|gb|EAR97009.1| hypothetical protein TTHERM_00196000 [Tetrahymena thermophila SB210]
Length = 1455
Score = 38.9 bits (89), Expect = 3.4, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 150 VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKL 209
VTL +L +FS FGP++KI M+ KN L++Y +++A AKE+L D ++
Sbjct: 1241 VTLKMLINIFSYFGPIEKI-MYLKNKS-SCLVEYTRIESASAAKESLNDMTFMDQ---EI 1295
Query: 210 HISYSRHTDLSIK 222
I YS + + IK
Sbjct: 1296 KIFYSNYDQIYIK 1308
>gi|407922123|gb|EKG15250.1| hypothetical protein MPH_07584 [Macrophomina phaseolina MS6]
Length = 589
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Query: 133 EPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVA 192
P N L + N+ + D L +FS +++ K G +++ DV A A
Sbjct: 396 NPPCNTLY--VGNLPIDTSEDELKAMFSKQRGYKRLCFRTKANGPMCFVEFEDVSFATKA 453
Query: 193 KEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMV 239
L GH +++ + +S+S++ + V N ++ + +P+TPM
Sbjct: 454 LNELYGHPLHNSVKGGIRLSFSKN---PLGVRNGQNNNSNIPATPMT 497
>gi|328853841|gb|EGG02977.1| hypothetical protein MELLADRAFT_109765 [Melampsora larici-populina
98AG31]
Length = 300
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 222 KVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPP------PEQPM 275
K+ N RD T + P V SQ S L Q P A +Y G Q PPP P QP
Sbjct: 46 KIPNRFWRDPTTTTIPAVKSQSSELAQPAAPQATTPAGKYQGIQLPPPPTLQATTPSQPS 105
Query: 276 MHQPTAAG 283
+ QP G
Sbjct: 106 IPQPDTIG 113
>gi|320166285|gb|EFW43184.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 683
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 150 VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKL 209
VT L FS GP++ F +NG A I++ D Q+A +A +L G + G +
Sbjct: 148 VTSSALTEFFSTVGPIKHCQQFSQNGNSFAFIEFGDHQSATLAVGSLNGALL---GGQPI 204
Query: 210 HISYSRH 216
+ +S H
Sbjct: 205 RVGWSHH 211
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,856,348,811
Number of Sequences: 23463169
Number of extensions: 255719314
Number of successful extensions: 861733
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 3297
Number of HSP's that attempted gapping in prelim test: 843230
Number of HSP's gapped (non-prelim): 16259
length of query: 341
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 198
effective length of database: 9,003,962,200
effective search space: 1782784515600
effective search space used: 1782784515600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)