Query 019436
Match_columns 341
No_of_seqs 262 out of 940
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 16:03:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019436.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019436hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1tf4_A T. fusca endo/EXO-cellu 100.0 2.9E-48 1E-52 403.2 18.6 167 13-203 278-446 (605)
2 1g87_A Endocellulase 9G; endog 100.0 1.1E-47 3.8E-52 399.4 16.4 216 13-286 276-495 (614)
3 1ia6_A Cellulase CEL9M; cellul 100.0 4.8E-47 1.7E-51 381.2 9.3 159 13-203 274-432 (441)
4 2xfg_A Endoglucanase 1; hydrol 100.0 7.7E-47 2.6E-51 382.0 9.5 165 14-203 300-465 (466)
5 1ks8_A Endo-B-1,4-glucanase; c 100.0 8E-46 2.7E-50 371.6 8.4 161 13-200 271-431 (433)
6 2yik_A Endoglucanase; hydrolas 100.0 1.2E-45 4E-50 384.1 6.4 164 12-203 344-518 (611)
7 1ut9_A Cellulose 1,4-beta-cell 100.0 1.8E-41 6.1E-46 352.6 10.5 169 10-200 434-607 (609)
8 3gzk_A Cellulase; fold from GH 100.0 6.3E-40 2.1E-44 336.6 5.8 149 9-202 368-536 (537)
9 1clc_A Endoglucanase CELD; EC: 100.0 5E-37 1.7E-41 320.7 7.7 146 9-199 415-563 (639)
10 3h7l_A Endoglucanase; dehydrog 99.7 2.3E-17 7.9E-22 170.4 7.4 121 35-194 424-561 (586)
11 3icg_A Endoglucanase D; cellul 99.1 1.5E-10 5.3E-15 117.5 9.2 86 247-336 381-480 (515)
12 3ndz_E Endoglucanase D; cellot 99.0 5.8E-10 2E-14 91.7 8.1 84 249-336 3-100 (107)
13 1exg_A EXO-1,4-beta-D-glycanas 98.9 2.6E-09 9E-14 88.0 8.2 85 246-337 7-104 (110)
14 2cwr_A Chitinase; chitin-bindi 98.4 2.7E-07 9.3E-12 75.3 6.2 63 256-329 16-86 (103)
15 1e5b_A Xylanase D; hydrolase, 97.1 5.6E-05 1.9E-09 59.7 -0.4 64 247-327 3-72 (87)
16 1heh_C Endo-1,4-beta-xylanase 96.8 0.00045 1.5E-08 54.5 1.8 64 247-327 4-73 (88)
17 2x3c_A Toxic extracellular end 66.8 4.7 0.00016 38.8 4.3 59 267-325 38-108 (343)
18 2wnx_A Glycoside hydrolase, fa 46.8 15 0.00051 31.8 3.6 40 247-288 11-52 (170)
19 1ufg_A Lamin A, nuclear lamin; 44.9 22 0.00075 30.3 4.3 41 271-322 52-97 (151)
20 3isy_A Bsupi, intracellular pr 40.5 1.5E+02 0.005 24.1 8.9 58 267-328 20-88 (120)
21 2e9g_A AP-1 complex subunit ga 39.1 1.3E+02 0.0043 24.5 8.1 42 246-289 21-62 (131)
22 3nrf_A APAG protein; structura 37.3 1.4E+02 0.0047 24.0 7.6 70 248-321 8-81 (106)
23 1ifr_A Lamin A/C; immunoglobul 37.2 38 0.0013 27.6 4.5 41 271-322 21-66 (121)
24 2lll_A Lamin-B2; immunoglobuli 36.3 47 0.0016 27.8 5.0 56 246-322 21-81 (139)
25 1xq4_A Protein APAG; all beta 35.9 70 0.0024 26.8 6.0 20 262-281 30-49 (139)
26 2g30_A AP-2 complex subunit be 35.8 97 0.0033 28.3 7.5 63 247-322 42-105 (258)
27 1xvs_A Protein APAG; MCSG APC2 34.7 49 0.0017 27.2 4.8 20 262-281 25-44 (126)
28 2f1e_A Protein APAG; APAG prot 33.6 47 0.0016 27.3 4.5 19 263-281 27-45 (127)
29 3idu_A Uncharacterized protein 26.1 2.2E+02 0.0074 23.1 7.3 22 267-288 35-56 (127)
30 3jt0_A Lamin-B1; structural ge 24.1 84 0.0029 26.4 4.5 40 271-322 40-84 (144)
31 3cfu_A Uncharacterized lipopro 21.6 67 0.0023 27.1 3.4 62 262-327 44-111 (159)
32 3hn9_A Lamin-B1; structural ge 21.2 1.1E+02 0.0037 24.8 4.5 40 271-322 27-71 (123)
33 3k7x_A LIN0763 protein; Q92DQ0 21.0 69 0.0024 30.3 3.7 18 82-99 167-184 (349)
34 2xbt_A Cellulosomal scaffoldin 20.5 1.6E+02 0.0054 25.0 5.5 41 246-288 7-49 (160)
No 1
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=100.00 E-value=2.9e-48 Score=403.19 Aligned_cols=167 Identities=33% Similarity=0.593 Sum_probs=151.8
Q ss_pred HHHHHHHHHHHHHhhCC-CCCceeeCCCcceeecCCChHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCChHHHHHHHH
Q 019436 13 ERYQQKAEYFMCSCLGK-GSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAK 91 (341)
Q Consensus 13 ~~y~~~a~~f~~~~~~~-~~~~~~~TpgGl~~~~~Wgs~~y~~n~afl~~~ya~~l~~~~~~~~c~~~~~~~~~~~~~A~ 91 (341)
++|++.|+.|||.++++ ++..+++||+||+|+..||+|||++|.|||+++|++++... .++++|++||+
T Consensus 278 ~~y~~~a~~~~~~~~~~~~~~~~~~tp~Gl~~~~~WGs~~~~~n~a~l~~~~a~~~~~~----------~~~~~y~~~A~ 347 (605)
T 1tf4_A 278 QKYIDDANRWLDYWTVGVNGQRVPYSPGGMAVLDTWGALRYAANTAFVALVYAKVIDDP----------VRKQRYHDFAV 347 (605)
T ss_dssp HHHHHHHHHHHHHTTTCBTTBCCCBCTTSCBCCCSSSHHHHHHHHHHHHHHHHHHCCCH----------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCCCccccCCCcceecCCccHHHHHHHHHHHHHHHHHhcccc----------ccHHHHHHHHH
Confidence 56999999999999865 45678999999999999999999999999999999987421 24689999999
Q ss_pred hcchhhhCCCCCCcceEeeeCCCCCCCCCCCCCccccccCCCCccccCCCccccccCCCCCCCCccceeecCCCC-CCCc
Q 019436 92 SQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDA-YDNF 170 (341)
Q Consensus 92 ~QidYiLG~Np~g~SYvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~C~~G~~~~~~~~~~np~vl~GAlVGGP~~-~d~y 170 (341)
+|||||||+||+++|||||||+|+|+|||||+|||+ |.++++.+.+|||+|+||||||||. +|+|
T Consensus 348 ~qidYiLG~Np~~~SyvvG~G~~~p~~pHHR~ss~~--------------~~~~~~~p~~~~~vl~GaLVGGP~~~~d~y 413 (605)
T 1tf4_A 348 RQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAHGS--------------WTDSIASPAENRHVLYGALVGGPGSPNDAY 413 (605)
T ss_dssp HHHHHHHTCSTTCCCSBTTSSSSCCSCCSCHHHHTC--------------SSSCTTSSSSCSSCCTTCBCCCCSSTTCCC
T ss_pred HHHHHhcCCCCCCcceEecCCCCCCCCCcccccccC--------------ccccccCCccCCCCCcceEEeCCCCCcccc
Confidence 999999999999999999999999999999999863 3345667889999999999999999 9999
Q ss_pred cccCCccccccccCCCCchHHHHHHHHhhcCCC
Q 019436 171 GDRRDNYEQTEPATYNNAPILGILARLNAGHGG 203 (341)
Q Consensus 171 ~D~r~~y~~nEvaid~NA~lv~~lA~l~~~~~~ 203 (341)
.|+|.+|++|||||||||+||++||+|...+|+
T Consensus 414 ~D~~~~y~~nEvai~~NA~lv~~lA~l~~~~~~ 446 (605)
T 1tf4_A 414 TDDRQDYVANEVATDYNAGFSSALAMLVEEYGG 446 (605)
T ss_dssp CCCTTCTTTTCCCGGGGHHHHHHHHHHHHHHCC
T ss_pred cccccchhhcCCccccchHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999998875
No 2
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=100.00 E-value=1.1e-47 Score=399.37 Aligned_cols=216 Identities=29% Similarity=0.479 Sum_probs=174.2
Q ss_pred HHHHHHHHHHHHHhhCC-CCCceeeCCCcceeecCCChHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCChHHHHHHHH
Q 019436 13 ERYQQKAEYFMCSCLGK-GSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAK 91 (341)
Q Consensus 13 ~~y~~~a~~f~~~~~~~-~~~~~~~TpgGl~~~~~Wgs~~y~~n~afl~~~ya~~l~~~~~~~~c~~~~~~~~~~~~~A~ 91 (341)
+.|++.++.+++.+++. ++..+++||+||+|++.||||||++|+|||+++|+|++. |. ..++.+|++||+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~tp~Gl~~~~~Wgs~~~~~n~afl~~~y~~~~~-------~~--~~~~~~y~~~A~ 346 (614)
T 1g87_A 276 QLYKDSIEMNLDFWTTGVNGTRVSYTPKGLAWLFQWGSLRHATTQAFLAGVYAEWEG-------CT--PSKVSVYKDFLK 346 (614)
T ss_dssp HHHHHHHHHHHHHHTTCBTTBCCEECTTSCEECCSSSHHHHHHHHHHHHHHHHHSTT-------SC--HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhccCCCccccCCCCceeccCCCcHHHHHHHHHHHHHHHHhhC-------CC--ccCHHHHHHHHH
Confidence 46999999999988865 556789999999999999999999999999999999862 42 235789999999
Q ss_pred hcchhhhCCCCCCcceEeeeCCCCCCCCCCCCCccccccCCCCccccCCCccccccCCCCCCCCccceeecCCCCCCCcc
Q 019436 92 SQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFG 171 (341)
Q Consensus 92 ~QidYiLG~Np~g~SYvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~C~~G~~~~~~~~~~np~vl~GAlVGGP~~~d~y~ 171 (341)
+|||||||+| +||||||||+|+|+|||||+|||+.. .+++.+.||||+|+||||||||.+|+|.
T Consensus 347 ~qidYiLG~n--~~SyvvG~G~~~p~~pHHR~ss~~~~--------------~~~~~p~p~~~~l~GaLVGGP~~~D~y~ 410 (614)
T 1g87_A 347 SQIDYALGST--GRSFVVGYGVNPPQHPHHRTAHGSWT--------------DQMTSPTYHRHTIYGALVGGPDNADGYT 410 (614)
T ss_dssp HHHHHHHTTT--SSCCBTTSSSSCCSCCBCHHHHTCSS--------------SCTTSSSSCSSCCTTCBCCCCCTTSCCC
T ss_pred HHHHHhcCCC--CcceEeccCCCCCCCCcchhhccCcc--------------ccccCCCCCCCCccccEeeCCCcccCcc
Confidence 9999999998 89999999999999999999998631 2466788999999999999999999999
Q ss_pred ccCCccccccccCCCCchHHHHHHHHhhcCCCCCCcCccccCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCceeE
Q 019436 172 DRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQLLPVIVPAATPVVTKPSPAPKPKTIPPTKPKTTPAPASSSGAIAI 251 (341)
Q Consensus 172 D~r~~y~~nEvaid~NA~lv~~lA~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~~~~t~tptp~p~~~~v~i 251 (341)
|+|.+|++|||||||||+||++||+|...+|+. ..+..|+ .. .|...++.+
T Consensus 411 D~~~~y~~nEvai~~NA~lv~~lA~l~~~~~~~--~~~~~~~-------------------~~--------~~~~~e~~v 461 (614)
T 1g87_A 411 DEINNYVNNEIACDYNAGFTGALAKMYKHSGGD--PIPNFKA-------------------IE--------KITNDEVII 461 (614)
T ss_dssp CCTTCHHHHBCCHHHHHHHHHHHHHHHHHHCCC--CCTTCCB-------------------CC--------CCCSCSEEE
T ss_pred ccccchhhcCCccccchHHHHHHHHHHHhcCCC--cCCCCCC-------------------CC--------CCCCCceEE
Confidence 999999999999999999999999999987751 1112211 00 011234444
Q ss_pred EEEEecccccCCeEEEEEEEEEEeCCC-Cc--eeeeEE
Q 019436 252 QQKLTTSWISNGKRYYRYSTIVTNKSA-KT--LKNLKL 286 (341)
Q Consensus 252 ~q~v~~sW~~gg~~y~q~~VtItN~g~-~~--I~~~~i 286 (341)
+-++..+ +..+++..++|+|++. .+ +++++|
T Consensus 462 ea~in~s----~~~~~~~~~~i~N~s~~pa~~l~~l~~ 495 (614)
T 1g87_A 462 KAGLNST----GPNYTEIKAVVYNQTGWPARVTDKISF 495 (614)
T ss_dssp EEEEEEE----ETTEEEEEEEEEECCCTTCCCBCSEEE
T ss_pred EEEeccC----CCCceEEEEEEEECCCCCCeecCceEE
Confidence 4333221 2346899999999988 33 367766
No 3
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=100.00 E-value=4.8e-47 Score=381.19 Aligned_cols=159 Identities=37% Similarity=0.594 Sum_probs=146.2
Q ss_pred HHHHHHHHHHHHHhhCCCCCceeeCCCcceeecCCChHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCChHHHHHHHHh
Q 019436 13 ERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKS 92 (341)
Q Consensus 13 ~~y~~~a~~f~~~~~~~~~~~~~~TpgGl~~~~~Wgs~~y~~n~afl~~~ya~~l~~~~~~~~c~~~~~~~~~~~~~A~~ 92 (341)
++|++.++.+++.++ ..+++||+||.|+..||+|||++|+|||+++|++++ .+++|++||++
T Consensus 274 ~~~~~~~~~~~~~~~----~~~~~tp~Gl~~~~~WGs~~~~~~~a~l~~~~~~~~--------------~~~~y~~~A~~ 335 (441)
T 1ia6_A 274 QIYKDAIEFNFNYWK----TQVTTTPGGLKWLSNWGVLRYAAAESMVMLVYCKQN--------------PDQSLLDLAKK 335 (441)
T ss_dssp HHHHHHHHHHHHHHH----HTSCBCTTSCBCCCSTTHHHHHHHHHHHHHHHHHHS--------------CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH----hhcccCCCCceecCCcchHHHHHHHHHHHHHHHhhc--------------CHHHHHHHHHH
Confidence 469999999999887 457899999999999999999999999999999985 36899999999
Q ss_pred cchhhhCCCCCCcceEeeeCCCCCCCCCCCCCccccccCCCCccccCCCccccccCCCCCCCCccceeecCCCCCCCccc
Q 019436 93 QVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGD 172 (341)
Q Consensus 93 QidYiLG~Np~g~SYvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~C~~G~~~~~~~~~~np~vl~GAlVGGP~~~d~y~D 172 (341)
|||||||+||+++|||||||+|+|+|||||+++++.. .+++.+.||||+|+||||||||.+|+|.|
T Consensus 336 qldYiLG~NP~~~SyvvG~G~~~p~~pHHR~s~~~~~--------------~~~~~p~p~~~~l~GalvGGP~~~d~y~D 401 (441)
T 1ia6_A 336 QVDYILGDNPANMSYIIGYGSNWCIHPHHRAANGYTY--------------ANGDNAKPAKHLLTGALVGGPDQNDKFLD 401 (441)
T ss_dssp HHHHHHTCSTTCCCSBTTSSSSCCSCCBCHHHHCCCC--------------C--CTTSCCSSCCTTCBCCCCCTTSCCCC
T ss_pred HHHHhcCCCCCCceeEEecCCCCCCCCcChhhccCCc--------------cccCCCCCCcccCccceeeCCCCCcCcCc
Confidence 9999999999999999999999999999999998641 25678899999999999999999999999
Q ss_pred cCCccccccccCCCCchHHHHHHHHhhcCCC
Q 019436 173 RRDNYEQTEPATYNNAPILGILARLNAGHGG 203 (341)
Q Consensus 173 ~r~~y~~nEvaid~NA~lv~~lA~l~~~~~~ 203 (341)
+|.+|++|||||||||+||++||+|...+|+
T Consensus 402 ~~~~y~~nEvai~~NA~~v~~la~l~~~~~~ 432 (441)
T 1ia6_A 402 DANQYQYTEVALDYNAGLVGVLAGAIKFFGG 432 (441)
T ss_dssp STTCHHHHBCCHHHHHHHHHHHHHHHHHTC-
T ss_pred ccccccccccchhhhHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999998875
No 4
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum}
Probab=100.00 E-value=7.7e-47 Score=382.00 Aligned_cols=165 Identities=33% Similarity=0.552 Sum_probs=148.5
Q ss_pred HHHHHHHHHHHHhhCC-CCCceeeCCCcceeecCCChHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCChHHHHHHHHh
Q 019436 14 RYQQKAEYFMCSCLGK-GSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKS 92 (341)
Q Consensus 14 ~y~~~a~~f~~~~~~~-~~~~~~~TpgGl~~~~~Wgs~~y~~n~afl~~~ya~~l~~~~~~~~c~~~~~~~~~~~~~A~~ 92 (341)
.|++.++.+++.++.+ ++..+++||+||+|++.||||||++|+|||+++|+|++. |. ..++.+|++||++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~tp~Gl~~~~~Wgs~~~~~n~afl~~~y~~~~~-------~~--~~~~~~y~~~A~~ 370 (466)
T 2xfg_A 300 KYKEAIERHLDWWTTGYNGERITYTPKGLAWLDQWGSLRYATTTAFLACVYSDWEN-------GD--KEKAKTYLEFARS 370 (466)
T ss_dssp HHHHHHHHHHHHHTTCBTTBCCCBCTTSCBCCCSSSHHHHHHHHHHHHHHHHTCTT-------SC--HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCccccCCccccccCCCCchHHHHHHHHHHHHHHHhcC-------CC--cccHHHHHHHHHH
Confidence 5778888888887755 456789999999999999999999999999999999862 42 2357999999999
Q ss_pred cchhhhCCCCCCcceEeeeCCCCCCCCCCCCCccccccCCCCccccCCCccccccCCCCCCCCccceeecCCCCCCCccc
Q 019436 93 QVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGD 172 (341)
Q Consensus 93 QidYiLG~Np~g~SYvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~C~~G~~~~~~~~~~np~vl~GAlVGGP~~~d~y~D 172 (341)
|||||||+| ++|||||||+|+|+|||||+|||+.. .+++.+.||||+|+||||||||.+|+|.|
T Consensus 371 qidYiLG~N--~~SyvvG~G~~~p~~pHHR~ss~~~~--------------~~~~~p~p~~~vl~GaLVGGP~~~D~y~D 434 (466)
T 2xfg_A 371 QADYALGST--GRSFVVGFGENPPKRPHHRTAHGSWA--------------DSQMEPPEHRHVLYGALVGGPDSTDNYTD 434 (466)
T ss_dssp HHHHHHTTT--SSCCBTTSSSSCCSCCSCHHHHTCSS--------------SCTTSSSSCSSCCTTCBCCCCCTTSCCCC
T ss_pred hHHhhcCCC--CcceEeccCCCCCCCCcCchhccCcc--------------ccccCCCCCCCCCccceeeCCCCccCcCc
Confidence 999999999 99999999999999999999998632 34667889999999999999999999999
Q ss_pred cCCccccccccCCCCchHHHHHHHHhhcCCC
Q 019436 173 RRDNYEQTEPATYNNAPILGILARLNAGHGG 203 (341)
Q Consensus 173 ~r~~y~~nEvaid~NA~lv~~lA~l~~~~~~ 203 (341)
+|.+|++|||||||||+||++||+|...+|+
T Consensus 435 ~~~~y~~nEvaid~NA~~v~~la~l~~~~g~ 465 (466)
T 2xfg_A 435 DISNYTCNEVACDYNAGFVGLLAKMYKLYGE 465 (466)
T ss_dssp CTTCHHHHCCCHHHHHHHHHHHHHHHHHHTC
T ss_pred ccccccccccchhhhHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999998875
No 5
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=100.00 E-value=8e-46 Score=371.55 Aligned_cols=161 Identities=35% Similarity=0.599 Sum_probs=148.2
Q ss_pred HHHHHHHHHHHHHhhCCCCCceeeCCCcceeecCCChHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCChHHHHHHHHh
Q 019436 13 ERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKS 92 (341)
Q Consensus 13 ~~y~~~a~~f~~~~~~~~~~~~~~TpgGl~~~~~Wgs~~y~~n~afl~~~ya~~l~~~~~~~~c~~~~~~~~~~~~~A~~ 92 (341)
++|++.++.|+|.++. .+.+||+||.|...||||||++|.|||+++|+++. ..+.+|++||++
T Consensus 271 ~~~~~~~~~~~~~~~~----~~~~tp~Gl~~~~~WGs~~~~~n~a~l~~~~~~~~-------------~~~~~y~~~A~~ 333 (433)
T 1ks8_A 271 QAYKDTVQSYVNYLIN----NQQKTPKGLLYIDMWGTLRHAANAAFIMLEAAELG-------------LSASSYRQFAQT 333 (433)
T ss_dssp HHHHHHHHHHHHHHHH----TSCBCTTSCBCCCSTTHHHHHHHHHHHHHHHHHTT-------------SSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh----cCCcCCCCceeecCCchhHHHHHHHHHHHHHHhcC-------------CCHHHHHHHHHH
Confidence 6799999999999983 36789999999999999999999999999999871 257999999999
Q ss_pred cchhhhCCCCCCcceEeeeCCCCCCCCCCCCCccccccCCCCccccCCCccccccCCCCCCCCccceeecCCCCCCCccc
Q 019436 93 QVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGD 172 (341)
Q Consensus 93 QidYiLG~Np~g~SYvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~C~~G~~~~~~~~~~np~vl~GAlVGGP~~~d~y~D 172 (341)
|||||||+| ++|||||||+|+|+|||||+|++|+. | .+|++| +++++.||||+|+||||||||.+|+|.|
T Consensus 334 qldYiLG~n--~~SyvvG~G~~~p~~pHHR~s~~~~~---~--~~c~~~---~~~~~~pn~~~l~GalvGGP~~~d~y~D 403 (433)
T 1ks8_A 334 QIDYALGDG--GRSFVCGFGSNPPTRPHHRSSSCPPA---P--ATCDWN---TFNSPDPNYHVLSGALVGGPDQNDNYVD 403 (433)
T ss_dssp HHHHHHTTT--SSCCBTTSSSSCCSCCSCHHHHCCCT---T--SCCSHH---HHTCSSCCSSCCTTCBCCCCCTTSCCCC
T ss_pred hHhhccCCC--CcceEeccCCCCCCCCcchhhcCCCc---c--cccccc---ccCCCCCCCCCCccceecCCCcccCcCc
Confidence 999999998 89999999999999999999999864 2 389765 5889999999999999999999999999
Q ss_pred cCCccccccccCCCCchHHHHHHHHhhc
Q 019436 173 RRDNYEQTEPATYNNAPILGILARLNAG 200 (341)
Q Consensus 173 ~r~~y~~nEvaid~NA~lv~~lA~l~~~ 200 (341)
+|.+|++|||||||||+||++||+|...
T Consensus 404 ~~~~y~~nEvai~~NA~~v~~la~l~~~ 431 (433)
T 1ks8_A 404 DRSDYVHNEVATDYNAGFQSALAALVAL 431 (433)
T ss_dssp CTTCHHHHCCCHHHHHHHHHHHHHHHHT
T ss_pred CccccccccccHHhHHHHHHHHHHHHhc
Confidence 9999999999999999999999999864
No 6
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum}
Probab=100.00 E-value=1.2e-45 Score=384.06 Aligned_cols=164 Identities=34% Similarity=0.551 Sum_probs=147.1
Q ss_pred HHHHHHHHHHH----------HHHhhCC-CCCceeeCCCcceeecCCChHHHHHHHHHHHHHHHHHhhhcCCccccCCCC
Q 019436 12 FERYQQKAEYF----------MCSCLGK-GSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGN 80 (341)
Q Consensus 12 l~~y~~~a~~f----------~~~~~~~-~~~~~~~TpgGl~~~~~Wgs~~y~~n~afl~~~ya~~l~~~~~~~~c~~~~ 80 (341)
.+.|++.++.+ +|.++++ ++..+++||+||+|+..||+|||++|++||+++|+|++.
T Consensus 344 ~~~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~tp~Gl~~~~~WGs~~~~~~~afl~~~ya~~~~------------ 411 (611)
T 2yik_A 344 EDRYKRASNKNQWEQIDFWKPIQDLLDKWSGGGITVTPGGYVFLNQWGSARYNTAAQLIALVYDKHHG------------ 411 (611)
T ss_dssp HHHHHHHTTCCTTSCCCTTHHHHHHHHHHHTTSSCBCTTSCBCSCSTTHHHHHHHHHHHHHHHHHTTT------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccCCCCceeccCCccccccCCCchHHHHHHHHHHHHHHHHhcC------------
Confidence 56788888875 3554433 345689999999999999999999999999999999863
Q ss_pred CChHHHHHHHHhcchhhhCCCCCCcceEeeeCCCCCCCCCCCCCccccccCCCCccccCCCccccccCCCCCCCCcccee
Q 019436 81 VAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAV 160 (341)
Q Consensus 81 ~~~~~~~~~A~~QidYiLG~Np~g~SYvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~C~~G~~~~~~~~~~np~vl~GAl 160 (341)
..+++|++||++|||||||+||+++|||||||+|+|+|||||+|+++. +++.+.||||+|+|||
T Consensus 412 ~~~~~y~~~A~~qidYiLG~NP~~~SyvvG~G~~~p~~pHHR~a~~~~----------------~~~~p~p~~~vl~GaL 475 (611)
T 2yik_A 412 DTPSKYANWARSQMDYLLGKNPLNRCYVVGYSSNSVKYPHHRAASGLK----------------DANDSSPHKYVLYGAL 475 (611)
T ss_dssp SSCCHHHHHHHHHHHHHTTCSTTCCBSBTTSSTTBCCCCBCHHHHCCS----------------CTTCCSCCSSCCTTCB
T ss_pred ccHHHHHHHHHHhHHhhcCCCCCCcceEeccCCCCCCCCcchhhcCcc----------------cccCCCCCCCCCCcee
Confidence 246899999999999999999999999999999999999999999863 3566889999999999
Q ss_pred ecCCCCCCCccccCCccccccccCCCCchHHHHHHHHhhcCCC
Q 019436 161 VGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGG 203 (341)
Q Consensus 161 VGGP~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~~~~~ 203 (341)
|||||.+|+|.|+|.+|++|||||||||+||++||+|...+|+
T Consensus 476 VGGPd~~d~y~D~~~~y~~nEvai~~NA~lv~~la~l~~~~~~ 518 (611)
T 2yik_A 476 VGGPDASDQHVDRTNDYIYNEVAIDYNAAFVGACAGLYRFFGD 518 (611)
T ss_dssp CSCCCTTSCCCCCTTCTTTTBCCHHHHHHHHHHHHHHHHHHCC
T ss_pred ecCCCcccCcCCCCcceeeccceecCccHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999998876
No 7
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Probab=100.00 E-value=1.8e-41 Score=352.64 Aligned_cols=169 Identities=22% Similarity=0.287 Sum_probs=145.6
Q ss_pred hHHHHHHHHHHHHHHHhhCCC----CCceeeCCCcceeecCCChHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCChHH
Q 019436 10 PVFERYQQKAEYFMCSCLGKG----SRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAE 85 (341)
Q Consensus 10 ~~l~~y~~~a~~f~~~~~~~~----~~~~~~TpgGl~~~~~Wgs~~y~~n~afl~~~ya~~l~~~~~~~~c~~~~~~~~~ 85 (341)
..++.|+..||.|+|.+.+.+ .....+||+|| .||||||++|.||++++++++. ...+
T Consensus 434 ~~~~~~~~~ad~~~~~~~~~~~g~~~~~~~~t~gg~----~WGs~~~~~n~a~~~~~a~~~~--------------~~~~ 495 (609)
T 1ut9_A 434 KARNNIAKAADRWLENIEEQGYRLPIKQAEDERGGY----PWGSNSFILNQMIVMGYAYDFT--------------GDSK 495 (609)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCCSCCCCSSSSCSC----CTTHHHHHHHHHHHHHHHHHHH--------------CCTH
T ss_pred HHHHHHHHHHHHHHHhhccCCCCccccccccCCCCc----ccccCHHHHHHHHHHHHHHHhc--------------ChHH
Confidence 456778999999999987553 22355788998 7999999999999999888874 4689
Q ss_pred HHHHHHhcchhhhCCCCCCcceEeeeCCCCCCCCCCCCCccccccCCC-CccccCCCccccccCCCCCCCCccceeecCC
Q 019436 86 LLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNP-SFVSCRGGYATWFSSKGSDPNLLVGAVVGGP 164 (341)
Q Consensus 86 ~~~~A~~QidYiLG~Np~g~SYvvG~G~~~P~~pHHR~ss~p~~~~~p-~~~~C~~G~~~~~~~~~~np~vl~GAlVGGP 164 (341)
|++||++|||||||+||++||||||||+|+|+|||||+++.+.....| .+.+|..|. .++..+||++ .|||||||
T Consensus 496 y~~~A~~qidYiLG~NP~~~SyVvG~G~~~p~~pHHR~~s~~~~~~~~~~~~G~l~Gg---p~~~~~dp~~-~ga~vggp 571 (609)
T 1ut9_A 496 YLDGMFDGISYLLGRNAMDQSYVTGYGERPLQNPHDRFWTPQTSKRFPAPPPGIISGG---PNSRFEDPTI-NAAVKKDT 571 (609)
T ss_dssp HHHHHHHHHHHHBTCSTTCCBCBBTCSSSCBCCCBCSSSCTTTCTTSCCCCSSCBCCC---CCTTCCSHHH-HHHSCTTC
T ss_pred HHHHHHHHHHhccCCCCCCceEEEecCCCCCCCCccccccccccccCCCCCCCCCCCC---CCCCCCCccc-ccccCCCC
Confidence 999999999999999999999999999999999999987765433222 347998774 5666788988 99999999
Q ss_pred CCCCCccccCCccccccccCCCCchHHHHHHHHhhc
Q 019436 165 DAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAG 200 (341)
Q Consensus 165 ~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~~ 200 (341)
+.+|+|.|+|++|++|||||||||+||++||+|.+.
T Consensus 572 ~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~~ 607 (609)
T 1ut9_A 572 PPQKCFIDHTDSWSTNEITVNWNAPFAWVTAYLDQY 607 (609)
T ss_dssp CGGGCCCCCTTCHHHHBCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCcCccccccccccceecchHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999864
No 8
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=100.00 E-value=6.3e-40 Score=336.64 Aligned_cols=149 Identities=23% Similarity=0.393 Sum_probs=127.5
Q ss_pred hhHHHHHHHHHHHHHHHhhCCCCCceeeCCCcceeec---CCChHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCChHH
Q 019436 9 APVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQ---RWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAE 85 (341)
Q Consensus 9 ~~~l~~y~~~a~~f~~~~~~~~~~~~~~TpgGl~~~~---~Wgs~~y~~n~afl~~~ya~~l~~~~~~~~c~~~~~~~~~ 85 (341)
++.++.|++.+|.|+ ..+ ..+|+|+.+.. .||||++++|.||+|++++++. ...+
T Consensus 368 ~~~~~~~~~~ad~~~-~~~-------~~~~~g~~~~~~~~~WGsn~~~~n~a~~l~~a~~~~--------------~~~~ 425 (537)
T 3gzk_A 368 NKVKSRLLRELDALA-AMA-------ESHPFGIPMRDDDFIWGSNMVLLNRAMAFLLAEGVG--------------VLHP 425 (537)
T ss_dssp HHHHHHHHHHHHHHH-HHH-------HHSTTCCSCCGGGCCTTHHHHHHHHHHHHHHHGGGT--------------CCCT
T ss_pred HHHHHHHHHHHHHHH-Hhc-------cCCCCceeecCCCCcccchHHHHHHHHHHHHHhhcc--------------CCHH
Confidence 445677888888885 433 34555655543 8999999999999999988763 3468
Q ss_pred HHHHH-HhcchhhhCCCCCCcceEeeeCCCCCCCCCCCCCccccccCCCCccccCCCccccccCCCCCCCCccceeecCC
Q 019436 86 LLGFA-KSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGP 164 (341)
Q Consensus 86 ~~~~A-~~QidYiLG~Np~g~SYvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~C~~G~~~~~~~~~~np~vl~GAlVGGP 164 (341)
|+++| ++|||||||+||+++|||||||+|+|+|||||.+++++ +|++|+|||||||
T Consensus 426 y~~~aa~~qidYiLG~NP~~~SyVvG~G~~~p~~pHHR~s~~~~-----------------------~~~p~~GalVGGP 482 (537)
T 3gzk_A 426 AAHTVAQRAADYLFGANPLGQCYVTGFGQRPVRHPHHRPSVADD-----------------------VDHPVPGMVVGGP 482 (537)
T ss_dssp THHHHHHHHHHHHBTCSTTCCBCBBTCSSSCBCSCBCHHHHHHC-----------------------TTSCCTTCBCCCC
T ss_pred HHHHHHHHhHHHhcCCCCCCceeEecCCCCCCCCCcchhhhcCC-----------------------CCCCCCCCCccCC
Confidence 99999 99999999999999999999999999999999987632 3567999999999
Q ss_pred CCC----------------CCccccCCccccccccCCCCchHHHHHHHHhhcCC
Q 019436 165 DAY----------------DNFGDRRDNYEQTEPATYNNAPILGILARLNAGHG 202 (341)
Q Consensus 165 ~~~----------------d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~~~~ 202 (341)
|.+ |+|.|+|.+|++|||||||||+||++||+|.+..|
T Consensus 483 n~~~~D~~~~~~~~~~~~~d~y~D~~~~y~~nEvai~~NA~lv~~lA~l~~~~g 536 (537)
T 3gzk_A 483 NRHLQDEIARAQLAGRPAMEAYIDHQDSYSTNEVAVYWNSPAVFVIAALLEARG 536 (537)
T ss_dssp CTTCCSHHHHHHCTTCCGGGCCCCCTTCHHHHBCCHHHHHHHHHHHHHHHSCCC
T ss_pred CcccccchhhhcccCCCcccCcCCCCccccccccchHHHHHHHHHHHHHHHhcC
Confidence 987 89999999999999999999999999999998776
No 9
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2
Probab=100.00 E-value=5e-37 Score=320.71 Aligned_cols=146 Identities=22% Similarity=0.246 Sum_probs=125.5
Q ss_pred hhHHHHHHHHHHHHHHHhhCCCCCceeeCCCcce--eecCCChHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCChHHH
Q 019436 9 APVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLI--FRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAEL 86 (341)
Q Consensus 9 ~~~l~~y~~~a~~f~~~~~~~~~~~~~~TpgGl~--~~~~Wgs~~y~~n~afl~~~ya~~l~~~~~~~~c~~~~~~~~~~ 86 (341)
+..++.|++.+|.|+|.. +++|+|+. +...||+|+|++|.||+++++.++. .+.+|
T Consensus 415 ~~~~~~~~~~a~~~~~~~--------~~~~~g~~~~~~~~WGsn~~~~~~a~~~~~a~~l~--------------~~~~~ 472 (639)
T 1clc_A 415 QSIKDSLLSTADSIVRTS--------QNHGYGRTLGTTYYWGCNGTVVRQTMILQVANKIS--------------PNNDY 472 (639)
T ss_dssp HHHHHHHHHHHHHHHHHH--------HTSTTCCTTTTCCCTTHHHHHHHTHHHHHHHHHHS--------------CCHHH
T ss_pred HHHHHHHHHHHHHHHHhc--------cCCCCCcccCCCCCCchHHHHHHHHHHHHHHHhcC--------------CHHHH
Confidence 345667888888888764 34555555 3679999999999999998887652 46899
Q ss_pred HHHHHhcchhhhCCCCCCcceEeeeCCCCCCCCCCCCCccccccCCCCccccCCCccccccCCCCCCCCccceeecCCCC
Q 019436 87 LGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDA 166 (341)
Q Consensus 87 ~~~A~~QidYiLG~Np~g~SYvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~C~~G~~~~~~~~~~np~vl~GAlVGGP~~ 166 (341)
++||++|||||||+||+++|||||||+|+|+|||||.++++ | .|++++||||||||.
T Consensus 473 ~~~A~~qidYiLG~NP~~~SyvvG~G~~~p~~pHHR~s~~~-------------~----------~~~~~~GalVGGP~~ 529 (639)
T 1clc_A 473 VNAALDAISHVFGRNYYNRSYVTGLGINPPMNPHDRRSGAD-------------G----------IWEPWPGYLVGGGWP 529 (639)
T ss_dssp HHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSSCBCHHHHHS-------------S----------CSSCCSSCBCCCCCS
T ss_pred HHHHHHHHhhccCCCCCCceEEEecCCCCCCCCcchhhccC-------------C----------CCCCCCeeeecCCCc
Confidence 99999999999999999999999999999999999976542 1 135699999999999
Q ss_pred -CCCccccCCccccccccCCCCchHHHHHHHHhh
Q 019436 167 -YDNFGDRRDNYEQTEPATYNNAPILGILARLNA 199 (341)
Q Consensus 167 -~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~ 199 (341)
+|+|.|+|.+|++|||+|||||+|+++||+|..
T Consensus 530 ~~d~y~D~r~~y~~nE~~~~~nA~~v~~la~~~~ 563 (639)
T 1clc_A 530 GPKDWVDIQDSYQTNEIAINWNAALIYALAGFVN 563 (639)
T ss_dssp STTCCCCCTTCTTTSBCCHHHHHHHHHHHHTTTT
T ss_pred cccccccCcccceeccccccchHHHHHHHHHhhh
Confidence 999999999999999999999999999998864
No 10
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=99.68 E-value=2.3e-17 Score=170.44 Aligned_cols=121 Identities=22% Similarity=0.237 Sum_probs=88.2
Q ss_pred eeCCCcceee----cCC-ChHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCChHHHHHHHHhcchhhhCCCCCCcceEe
Q 019436 35 QKTPGGLIFR----QRW-NNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMV 109 (341)
Q Consensus 35 ~~TpgGl~~~----~~W-gs~~y~~n~afl~~~ya~~l~~~~~~~~c~~~~~~~~~~~~~A~~QidYiLG~Np~g~SYvv 109 (341)
.+++.++.+. ..| |+|++++|.||+|+++++++... ....+|+++|++|||||||+||+++||||
T Consensus 424 ~~~~y~~p~~~~~~y~WqGsN~~~an~a~~~~~a~~~~~~~----------~~~~~y~~~a~~qldyiLG~Np~~~s~v~ 493 (586)
T 3h7l_A 424 KRDAFFVAHNNESGYWWQGENARLGSLATMAYLAQPHIASQ----------EIQQQLSVFAQDALNWIVGLNPYDMCMLD 493 (586)
T ss_dssp CEEESSCCSSSTTSSCCCCCHHHHHHHHHHHHHSGGGCCCH----------HHHHHHHHHHHHHHHHHBTCSTTCCBCBT
T ss_pred cccccccccCCCCCCeeeChHHHHHHHHHHHHHHHHhcCCc----------hhHHHHHHHHHHhhhhhccCCCCCCccEE
Confidence 4444444442 479 99999999999999999986210 01489999999999999999999999999
Q ss_pred eeCCCCCCCCCCCCCccccccCCCCccccCCCccccccCCCCCCCCccceeecCCCCC--C----------CccccCCcc
Q 019436 110 GYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAY--D----------NFGDRRDNY 177 (341)
Q Consensus 110 G~G~~~P~~pHHR~ss~p~~~~~p~~~~C~~G~~~~~~~~~~np~vl~GAlVGGP~~~--d----------~y~D~r~~y 177 (341)
|||.|+|+ ||.+. || + + ++|.|+|||+.. | ...|.-.+|
T Consensus 494 G~G~~~p~---~r~~~---------------~~--------~--~-~pG~i~gG~~~g~~D~~~ia~~~~~~~~~~~~~w 544 (586)
T 3h7l_A 494 GHGRNNPD---YLPQY---------------GF--------F--N-AKGGVCNGITGGFEDEEDIAFNPPAQKDDMLQNW 544 (586)
T ss_dssp TSSSCCCC---SBGGG---------------TB--------C--C-CTTCBBCCCEECSSCTTSEESSCTTTTTCTTTTH
T ss_pred eeCCCCCc---cCccc---------------CC--------C--C-CCccccCCCCCCcCChhhHhcCccccccccccCc
Confidence 99999887 67542 11 2 2 789999999853 2 223555688
Q ss_pred ccccccCCCCchHHHHH
Q 019436 178 EQTEPATYNNAPILGIL 194 (341)
Q Consensus 178 ~~nEvaid~NA~lv~~l 194 (341)
.-+|--|=--|=+..++
T Consensus 545 rw~eqw~ph~~w~l~a~ 561 (586)
T 3h7l_A 545 RWGEQWIPHGAWYLLAI 561 (586)
T ss_dssp HHHCBBHHHHHHHHHHH
T ss_pred ccHhhccchHHHHHHHH
Confidence 88887775444333333
No 11
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=99.10 E-value=1.5e-10 Score=117.45 Aligned_cols=86 Identities=16% Similarity=0.304 Sum_probs=68.7
Q ss_pred CceeEEEEEecccccCCeEEEEEEEEEEeCCCCceeeeEEEecC----CCCCccccEE--cCCc--eecCCccccCCC-C
Q 019436 247 GAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISK----LYGPLWGLTN--LGNA--YGFPSWLNNLAA-G 317 (341)
Q Consensus 247 ~~v~i~q~v~~sW~~gg~~y~q~~VtItN~g~~~I~~~~i~~~~----l~~~iWnv~~--~~n~--~tLPs~~~~I~p-G 317 (341)
..++++.+++++|..| +|.+|+|+|++..+|.+|+|.++- .+.++||.+. .++. ++.++|+.+|+| |
T Consensus 381 ~~~~~~~~~~~~W~~g----~~~~v~v~n~~~~~~~~W~~~~~~~~~~~i~~~wn~~~~~~g~~~~~~~~~~n~~~~~~g 456 (515)
T 3icg_A 381 SAVEVTYAITNSWGSG----ASVNVTIKNNGTTPINGWTLKWTMPINQTITNMWSASFVASGTTLSVTNAGYNGTIAANG 456 (515)
T ss_dssp CCEEEEEEEEEECSSE----EEEEEEEEECSSSCEESCEEEEECCTTEEEEEEESEEEEEETTEEEEEECSTTCEECTTT
T ss_pred CceEEEEEEecCCCCc----cEEEEEEEeCCCCCcCCeEEEEEeCCCCEeeccccceEEecCCeEEEecCccccccCCCC
Confidence 3355555789999888 999999999999999999999883 2678999964 5564 567999999999 9
Q ss_pred CeEEEEEEeC--C---CCceEEEE
Q 019436 318 KSLEFVYIHT--A---NAADVSVS 336 (341)
Q Consensus 318 ~S~tFGYI~~--~---~~a~l~V~ 336 (341)
+|.+|||+.. + .|..++|.
T Consensus 457 ~s~~~gf~~~~~g~~~~p~~~~ln 480 (515)
T 3icg_A 457 GTQSFGFNINYSGVLSKPTGFTVN 480 (515)
T ss_dssp EEEEEEEEEEECSSCCCCSCCEET
T ss_pred ceEEEEEEEeCCCCCCCCceEEEC
Confidence 9999999954 2 26666654
No 12
>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E*
Probab=99.03 E-value=5.8e-10 Score=91.73 Aligned_cols=84 Identities=15% Similarity=0.290 Sum_probs=67.9
Q ss_pred eeEEEEEecccccCCeEEEEEEEEEEeCCCCceeeeEEEecC----CCCCccccEE--cCCc--eecCCccccCCC-CCe
Q 019436 249 IAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISK----LYGPLWGLTN--LGNA--YGFPSWLNNLAA-GKS 319 (341)
Q Consensus 249 v~i~q~v~~sW~~gg~~y~q~~VtItN~g~~~I~~~~i~~~~----l~~~iWnv~~--~~n~--~tLPs~~~~I~p-G~S 319 (341)
++++.++.++|..| ++.+|+|+|++..+|.+|.|.++- .+.++||.+. .++. ++.++|+..|+| |++
T Consensus 3 c~v~y~v~~~W~~G----f~~~vtVtN~g~~~i~gWtv~~~~p~g~~it~~Wna~~s~sG~~vt~~n~~wN~~la~~G~s 78 (107)
T 3ndz_E 3 VEVTYAITNSWGSG----ASVNVTIKNNGTTPINGWTLKWTMPINQTITNMWSASFVASGTTLSVTNAGYNGTIAANGGT 78 (107)
T ss_dssp EEEEEEEEEECSSE----EEEEEEEEECSSSCEESCEEEEECCTTEEEEEEESEEEEEETTEEEEEECSTTCEECTTTEE
T ss_pred cEEEEEEcccCCCC----EEEEEEEEeCCCCcccCcEEEEEcCCCCEEecccceEEEecCCEEEEEECCcccccCCCCcc
Confidence 34555788999888 999999999999999999999883 2578999964 5565 456999999999 999
Q ss_pred EEEEEEeCC-----CCceEEEE
Q 019436 320 LEFVYIHTA-----NAADVSVS 336 (341)
Q Consensus 320 ~tFGYI~~~-----~~a~l~V~ 336 (341)
.+|||+... .|..|+|.
T Consensus 79 ~~fGf~g~~~G~~~~P~~~~ln 100 (107)
T 3ndz_E 79 QSFGFNINYSGVLSKPTGFTVN 100 (107)
T ss_dssp EEEEEEEEECSSCCCCSCCEET
T ss_pred EEEEEEEeCCCCCCCCcEEEEC
Confidence 999999552 26666654
No 13
>1exg_A EXO-1,4-beta-D-glycanase; cellulose binding domain, cellulose degradation; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1exh_A
Probab=98.92 E-value=2.6e-09 Score=88.01 Aligned_cols=85 Identities=18% Similarity=0.314 Sum_probs=68.9
Q ss_pred CCceeEEEEEecccccCCeEEEEEEEEEEeCCCCceeeeEEEecC----CCCCccccEE--cCCc--eecCCccccCCCC
Q 019436 246 SGAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISK----LYGPLWGLTN--LGNA--YGFPSWLNNLAAG 317 (341)
Q Consensus 246 ~~~v~i~q~v~~sW~~gg~~y~q~~VtItN~g~~~I~~~~i~~~~----l~~~iWnv~~--~~n~--~tLPs~~~~I~pG 317 (341)
.|.+++ + +++|..| +|.+|+|+|++..+|++|.|.++- .+.++||.+. .++. ++.++|+..|++|
T Consensus 7 ~c~v~y--~-~~~W~~G----f~~~vtVtN~g~~~i~gWtv~~~~~~g~~i~~~Wna~~s~sG~~vt~~n~~wN~~la~G 79 (110)
T 1exg_A 7 GCQVLW--G-VNQWNTG----FTANVTVKNTSSAPVDGWTLTFSFPSGQQVTQAWSSTVTQSGSAVTVRNAPWNGSIPAG 79 (110)
T ss_dssp CEEEEC--C-EEESSSE----EEEEEEEEECSSSCEESEEEEEECSSSCEEEEEESSEEEEETTEEEEEECSGGGEECSS
T ss_pred cEEEEE--E-eCCCCCC----EEEEEEEEeCCCCcccceEEEEEcCCCcEEecccceEEEccCCEEEEecccccceeCCC
Confidence 466666 4 7999888 999999999999999999999883 2567999864 5554 6789999999999
Q ss_pred CeEEEEEEeCC----C-CceEEEEE
Q 019436 318 KSLEFVYIHTA----N-AADVSVSA 337 (341)
Q Consensus 318 ~S~tFGYI~~~----~-~a~l~V~~ 337 (341)
++++|||+... + |..|.|..
T Consensus 80 ~s~~fGf~~~~~g~~~~Pt~~~lnG 104 (110)
T 1exg_A 80 GTAQFGFNGSHTGTNAAPTAFSLNG 104 (110)
T ss_dssp EEEEEEEEEECSSSCCCCSCEEETT
T ss_pred cEEEEEEEEeCCCCCCCCceEEEcC
Confidence 99999999643 2 66676643
No 14
>2cwr_A Chitinase; chitin-binding domain, endoglucanase, hyperthermophilic, hydrolase; 1.70A {Pyrococcus furiosus} PDB: 2czn_A
Probab=98.44 E-value=2.7e-07 Score=75.27 Aligned_cols=63 Identities=16% Similarity=0.355 Sum_probs=51.1
Q ss_pred ecccccCCeEEEEEEEEEEeCCCCceeeeEEEecC----CCCCccccEE--cCCc--eecCCccccCCCCCeEEEEEEeC
Q 019436 256 TTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISK----LYGPLWGLTN--LGNA--YGFPSWLNNLAAGKSLEFVYIHT 327 (341)
Q Consensus 256 ~~sW~~gg~~y~q~~VtItN~g~~~I~~~~i~~~~----l~~~iWnv~~--~~n~--~tLPs~~~~I~pG~S~tFGYI~~ 327 (341)
+++|..| +|.+|+|+|.+. ++|.|.++- .+.++||.+. .++. ++.++|+. |++.+|||+..
T Consensus 16 ~n~W~~G----f~~~vtVtN~g~---~gWtv~~~~~~g~~it~~Wna~~s~sg~~vt~~n~~wN~----G~s~sfGf~gs 84 (103)
T 2cwr_A 16 VNDWGSG----AEYDVTLNLDGQ---YDWTVKVKLAPGATVGSFWSANKQEGNGYVIFTPVSWNK----GPTATFGFIVN 84 (103)
T ss_dssp EEECSSE----EEEEEEEEESSC---CCCEEEEEECTTCEEEEEESEEEEEETTEEEEEECTTCC----SSEEEEEEEEE
T ss_pred ECCCCCc----eEEEEEEeCCCC---CcEEEEEECCCCcEEecccceEEecCCCEEEEEcCCcCC----CceeEEEEEEe
Confidence 7999888 899999999964 789888872 2678999964 4444 67899997 99999999965
Q ss_pred CC
Q 019436 328 AN 329 (341)
Q Consensus 328 ~~ 329 (341)
+.
T Consensus 85 ~~ 86 (103)
T 2cwr_A 85 GP 86 (103)
T ss_dssp CS
T ss_pred cC
Confidence 43
No 15
>1e5b_A Xylanase D; hydrolase, xylan binding domain, beta-sheet; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1e5c_A 1xbd_A 2xbd_A
Probab=97.14 E-value=5.6e-05 Score=59.67 Aligned_cols=64 Identities=9% Similarity=0.193 Sum_probs=48.0
Q ss_pred CceeEEEEEecccccCCeEEEEEEEEEEeCCCCceeeeEEEecC----CCCCccccEE--cCCceecCCccccCCCCCeE
Q 019436 247 GAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISK----LYGPLWGLTN--LGNAYGFPSWLNNLAAGKSL 320 (341)
Q Consensus 247 ~~v~i~q~v~~sW~~gg~~y~q~~VtItN~g~~~I~~~~i~~~~----l~~~iWnv~~--~~n~~tLPs~~~~I~pG~S~ 320 (341)
|.+++ ++.++|..| +|.+|+|+| +++|.|.++- .+.++||.+. .++.++.-. +|++.
T Consensus 3 cta~y--~v~~~W~~G----f~~~vtVtn-----~~gWtv~~~~~~g~~i~~~Wn~~~s~sg~~vt~~n------~G~s~ 65 (87)
T 1e5b_A 3 CSVTA--TRAEEWSDG----FNVTYSVSG-----SSAWTVNLALNGSQTIQASWNANVTGSGSTRTVTP------NGSGN 65 (87)
T ss_dssp CCCBC--CBCCCCSSE----EEEEEBCCS-----CSSCCCEEECCTTCCEEEEESBCCEESSSCEECCB------CSSCS
T ss_pred eEEEE--EECccCCCC----EEEEEEEEc-----cCceEEEEEcCCCCEEeeeeceeEecCCCEEEEEC------CCcee
Confidence 44444 568999888 999999997 5888888773 2577999853 555555432 89999
Q ss_pred EEEEEeC
Q 019436 321 EFVYIHT 327 (341)
Q Consensus 321 tFGYI~~ 327 (341)
+|||+..
T Consensus 66 sfGf~g~ 72 (87)
T 1e5b_A 66 TFGVTVM 72 (87)
T ss_dssp SEEEEEE
T ss_pred EEEEEEe
Confidence 9999954
No 16
>1heh_C Endo-1,4-beta-xylanase D; hydrolase(xylan degradation), hydrolase, xylan binding domain, beta-sheet; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1hej_C
Probab=96.75 E-value=0.00045 Score=54.55 Aligned_cols=64 Identities=8% Similarity=0.124 Sum_probs=48.1
Q ss_pred CceeEEEEEecccccCCeEEEEEEEEEEeCCCCceeeeEEEecC----CCCCccccEE--cCCceecCCccccCCCCCeE
Q 019436 247 GAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISK----LYGPLWGLTN--LGNAYGFPSWLNNLAAGKSL 320 (341)
Q Consensus 247 ~~v~i~q~v~~sW~~gg~~y~q~~VtItN~g~~~I~~~~i~~~~----l~~~iWnv~~--~~n~~tLPs~~~~I~pG~S~ 320 (341)
|.+++ ++.++|..| ||.+|+|+ + +++|.|.++- .+.+.||.+. .++.++.- ++|++.
T Consensus 4 Ctaty--~~~n~W~~G----f~a~vtVt--g---~~gWtv~~~~~~gq~vt~~Wna~~s~sg~~vt~~------~~G~s~ 66 (88)
T 1heh_C 4 CSVSA--VRGEEWADR----FNVTYSVS--G---SSSWVVTLGLNGGQSVQSSWNAALTGSSGTVTAR------PNGSGN 66 (88)
T ss_dssp CCCCC--CCCSBCSSE----EEEEEECS--S---CCSCCCEEECCSSCCCCCEESSEEECSSSEEEEE------CSSSCS
T ss_pred eEEEE--EEcccCCCc----eEEEEEEe--c---cccEEEEEECCCCCEEEccccccCccCCCEEEEe------CCCcee
Confidence 54544 568999888 89999998 4 2888887772 3788999975 44556553 489999
Q ss_pred EEEEEeC
Q 019436 321 EFVYIHT 327 (341)
Q Consensus 321 tFGYI~~ 327 (341)
+|||+..
T Consensus 67 sfGf~g~ 73 (88)
T 1heh_C 67 SFGVTFY 73 (88)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9999954
No 17
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=66.79 E-value=4.7 Score=38.77 Aligned_cols=59 Identities=25% Similarity=0.231 Sum_probs=34.2
Q ss_pred EEEEEEEEeCCCCceeeeEE-EecCCCCCccccEEcCCc---------eecC--CccccCCCCCeEEEEEE
Q 019436 267 YRYSTIVTNKSAKTLKNLKL-SISKLYGPLWGLTNLGNA---------YGFP--SWLNNLAAGKSLEFVYI 325 (341)
Q Consensus 267 ~q~~VtItN~g~~~I~~~~i-~~~~l~~~iWnv~~~~n~---------~tLP--s~~~~I~pG~S~tFGYI 325 (341)
....|+|+|+|.++++=++. ..|.+...+-.|.+.|.. +..| .-...|+||+|++-=+=
T Consensus 38 ~~vk~tvtN~g~~~~~lLk~~~lD~~~~~~~~V~~~G~~v~f~Gi~~~~~~~~~d~f~~L~pG~Sve~~~d 108 (343)
T 2x3c_A 38 VRVNLTLTNTGDKPIRLLKWQLPGSDDAPLFLVERDGQPVSYEGALIKRAAPTDKDFQLLKAGQSLTVQAE 108 (343)
T ss_dssp CEEEEEEEECSSSCEEEEGGGSCSSSCCCCEEEEETTEECCBCSCCCCCCCCCGGGEEEECTTCEEEEEEE
T ss_pred eEEEEEEEeCCCCceEeeccCCCCcCccceEEEEeCCcccceeeEEEeccCCChhhcEEeCCCCeEEEEEe
Confidence 78999999999998764332 334333344444433311 2222 11246888888765554
No 18
>2wnx_A Glycoside hydrolase, family 9; cellulose degradation; 1.31A {Clostridium thermocellum} PDB: 2wo4_A 2wob_A
Probab=46.83 E-value=15 Score=31.80 Aligned_cols=40 Identities=15% Similarity=0.174 Sum_probs=27.2
Q ss_pred CceeEEEEEecccccCCeEEEEEEEEEEeCCCCce--eeeEEEe
Q 019436 247 GAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTL--KNLKLSI 288 (341)
Q Consensus 247 ~~v~i~q~v~~sW~~gg~~y~q~~VtItN~g~~~I--~~~~i~~ 288 (341)
..|.|..+. +.... +....+..++|+|++..+| ++++|+-
T Consensus 11 ~~l~Vqy~~-~~~~~-~~n~i~~~~~I~N~g~~~i~Ls~lkiRY 52 (170)
T 2wnx_A 11 ASISVSYKC-GVKDG-TKNTIRATINIKNTGTTPVNLSDIKVRY 52 (170)
T ss_dssp CCEEEEEEE-CCCCS-SCCEEEEEEEEEECSSSCEEGGGEEEEE
T ss_pred CcEEEEEEe-CCCCC-CCCEEEEEEEEEECCCCceecCcEEEEE
Confidence 677776654 33332 2335889999999999877 4777644
No 19
>1ufg_A Lamin A, nuclear lamin; immunoglobulin like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Mus musculus} SCOP: b.1.16.1
Probab=44.85 E-value=22 Score=30.28 Aligned_cols=41 Identities=27% Similarity=0.409 Sum_probs=27.1
Q ss_pred EEEEeCCCCceeeeEEEecCCCCCccccEE--c---CCceecCCccccCCCCCeEEE
Q 019436 271 TIVTNKSAKTLKNLKLSISKLYGPLWGLTN--L---GNAYGFPSWLNNLAAGKSLEF 322 (341)
Q Consensus 271 VtItN~g~~~I~~~~i~~~~l~~~iWnv~~--~---~n~~tLPs~~~~I~pG~S~tF 322 (341)
|.|+|++.+++ .+ .=|-|.+ . ...|+||.-. .|+||++++.
T Consensus 52 V~L~N~s~~~~-----~L-----~GW~L~r~vdg~~~~~y~Fp~~~-~L~pg~tVtI 97 (151)
T 1ufg_A 52 VRLRNKSNEDQ-----SM-----GNWQIRRQNGDDPLMTYRFPPKF-TLKAGQVVTI 97 (151)
T ss_dssp EEEEECSSSCE-----EC-----SSCEEEEEETTSCCEEEECCTTC-EECTTCEEEE
T ss_pred EEEEECCCCcc-----cc-----CCCEEEEecCCCccEEEEECCCc-EECCCCEEEE
Confidence 89999998643 11 2244432 1 1359999854 6999999874
No 20
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=40.47 E-value=1.5e+02 Score=24.11 Aligned_cols=58 Identities=10% Similarity=0.234 Sum_probs=35.3
Q ss_pred EEEEEEEEeCCCCceeeeEEEec--------CC-CCCccccEEcCC--ceecCCccccCCCCCeEEEEEEeCC
Q 019436 267 YRYSTIVTNKSAKTLKNLKLSIS--------KL-YGPLWGLTNLGN--AYGFPSWLNNLAAGKSLEFVYIHTA 328 (341)
Q Consensus 267 ~q~~VtItN~g~~~I~~~~i~~~--------~l-~~~iWnv~~~~n--~~tLPs~~~~I~pG~S~tFGYI~~~ 328 (341)
..+.++|+|.+.+++. +.+... +. -..+| +.++ .|+-.-=..+|+||++.+|-..-..
T Consensus 20 v~~~ltv~N~s~~~v~-l~f~Sgq~~Df~v~d~~G~~Vw---rwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~ 88 (120)
T 3isy_A 20 IKFNMSLKNQSERAIE-FQFSTGQKFELVVYDSEHKERY---RYSKEKMFTQAFQNLTLESGETYDFSDVWKE 88 (120)
T ss_dssp EEEEEEEEECSSSCEE-EEESSSCCEEEEEECTTCCEEE---ETTTTCCCCCCCEEEEECTTCEEEEEEEESS
T ss_pred EEEEEEEEcCCCCcEE-EEeCCCCEEEEEEECCCCCEEE---EccccchhhhhhceEEECCCCEEEEEEEeCC
Confidence 6788999999987652 222211 11 13477 3222 2443223367999999999988663
No 21
>2e9g_A AP-1 complex subunit gamma-2; beta-sandwich, immunoglobulin-like fold, adaptin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.12 E-value=1.3e+02 Score=24.49 Aligned_cols=42 Identities=7% Similarity=0.005 Sum_probs=31.4
Q ss_pred CCceeEEEEEecccccCCeEEEEEEEEEEeCCCCceeeeEEEec
Q 019436 246 SGAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSIS 289 (341)
Q Consensus 246 ~~~v~i~q~v~~sW~~gg~~y~q~~VtItN~g~~~I~~~~i~~~ 289 (341)
.+.|.|.-.....+.+.+. ....++++|++..+|+++.|.+.
T Consensus 21 ~~~l~I~f~~~~~~~~~~~--~~i~~~~~N~s~~~it~f~fQaA 62 (131)
T 2e9g_A 21 REGVQLNLSFIRPPENPAL--LLITITATNFSEGDVTHFICQAA 62 (131)
T ss_dssp CSSEEEEEEEECCSSCTTE--EEEEEEEEECSSSCEEEEEEEEE
T ss_pred cCCEEEEEEEEcCCCCCCe--EEEEEEEEECCCCccccEEEEEE
Confidence 4678887666655544433 56788999999999999999776
No 22
>3nrf_A APAG protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; 1.50A {Pseudomonas aeruginosa} PDB: 3sb3_A
Probab=37.27 E-value=1.4e+02 Score=23.97 Aligned_cols=70 Identities=19% Similarity=0.224 Sum_probs=46.0
Q ss_pred ceeEEEEEecccccCCeEEEE--EEEEEEeCCCCce--eeeEEEecCCCCCccccEEcCCceecCCccccCCCCCeEE
Q 019436 248 AIAIQQKLTTSWISNGKRYYR--YSTIVTNKSAKTL--KNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLE 321 (341)
Q Consensus 248 ~v~i~q~v~~sW~~gg~~y~q--~~VtItN~g~~~I--~~~~i~~~~l~~~iWnv~~~~n~~tLPs~~~~I~pG~S~t 321 (341)
.|--+|+..++=..+++.+|+ ++|.|-|.+.++| +...|..-...+.-..++..+..++ ...|.+|++.+
T Consensus 8 ~V~At~k~~GS~s~~~k~~ytktFdV~vaNl~~~~idLsk~C~~a~~~~gkef~ldTVde~L~----~g~lk~g~~vk 81 (106)
T 3nrf_A 8 MVFARQGDKGSVSVGDKHFRTQAFKVRLVNAAKSEISLKNSCLVAQSAAGQSFRLDTVDEELT----ADTLKPGASVE 81 (106)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEEEEEEECCSSSCEECTTCEEEEEETTSCEEEEEEECGGGG----CSEECTTCEEE
T ss_pred EEEeeccccccEEeCCeeEEEEEEEEEEecCCCCccccchhhheeeCcCCCEEEecccchhhh----hccccCCCcee
Confidence 345567788888888877654 7888999999876 3566655432344444544433343 35799998875
No 23
>1ifr_A Lamin A/C; immunoglobulin, immune system; 1.40A {Homo sapiens} SCOP: b.1.16.1 PDB: 1ivt_A 3gef_A
Probab=37.25 E-value=38 Score=27.59 Aligned_cols=41 Identities=29% Similarity=0.516 Sum_probs=27.3
Q ss_pred EEEEeCCCCceeeeEEEecCCCCCccccEEc-C----CceecCCccccCCCCCeEEE
Q 019436 271 TIVTNKSAKTLKNLKLSISKLYGPLWGLTNL-G----NAYGFPSWLNNLAAGKSLEF 322 (341)
Q Consensus 271 VtItN~g~~~I~~~~i~~~~l~~~iWnv~~~-~----n~~tLPs~~~~I~pG~S~tF 322 (341)
|.|+|++.+++ .+ .=|-|.+. + ..|+||.-. .|+||++++.
T Consensus 21 V~l~N~s~~~~-----~L-----~gW~l~r~v~~~~~~~y~Fp~~~-~L~pg~~vtI 66 (121)
T 1ifr_A 21 VRLRNKSNEDQ-----SM-----GNWQIKRQNGDDPLLTYRFPPKF-TLKAGQVVTI 66 (121)
T ss_dssp EEEEECSSSCE-----EC-----TTCEEEEEETTSCCEEEECCSSC-EECTTCEEEE
T ss_pred EEEEeCCCCcc-----cc-----CCCEEEEEcCCCccEEEEeCCCc-EECCCCEEEE
Confidence 89999998643 11 23554331 2 359999853 6999999873
No 24
>2lll_A Lamin-B2; immunoglobulin-like fold, structural protein, NESG, northeas structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=36.31 E-value=47 Score=27.82 Aligned_cols=56 Identities=23% Similarity=0.433 Sum_probs=34.5
Q ss_pred CCceeEEEEEecccccCCeEEEEEEEEEEeCCCCceeeeEEEecCCCCCccccEE-cC----CceecCCccccCCCCCeE
Q 019436 246 SGAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTN-LG----NAYGFPSWLNNLAAGKSL 320 (341)
Q Consensus 246 ~~~v~i~q~v~~sW~~gg~~y~q~~VtItN~g~~~I~~~~i~~~~l~~~iWnv~~-~~----n~~tLPs~~~~I~pG~S~ 320 (341)
..+|+|.-. + .+| .| |.|+|++.+++. + .=|-|.+ .+ ..|+||.-. .|+||+++
T Consensus 21 kG~V~I~E~--d--~~G-----ef-V~L~N~s~~~~~-----L-----~GW~L~r~v~g~~~~~y~Fp~~~-~L~pg~~V 79 (139)
T 2lll_A 21 SGSVSIEEI--D--LEG-----KF-VQLKNNSDKDQS-----L-----GNWRIKRQVLEGEEIAYKFTPKY-ILRAGQMV 79 (139)
T ss_dssp TTSEEEEEE--C--SSC-----SE-EEEEECSSSCEE-----C-----SSCEEEEEETTSCEEEEECCTTC-EECTTCEE
T ss_pred CCCEEEEEE--C--CCC-----CE-EEEEECCCCccc-----c-----CCCEEEEecCCCccEEEEECCCc-EECCCCEE
Confidence 467888632 1 223 23 899999976541 1 2244433 22 349999854 69999998
Q ss_pred EE
Q 019436 321 EF 322 (341)
Q Consensus 321 tF 322 (341)
+.
T Consensus 80 tI 81 (139)
T 2lll_A 80 TV 81 (139)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 25
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=35.95 E-value=70 Score=26.78 Aligned_cols=20 Identities=15% Similarity=0.338 Sum_probs=16.5
Q ss_pred CCeEEEEEEEEEEeCCCCce
Q 019436 262 NGKRYYRYSTIVTNKSAKTL 281 (341)
Q Consensus 262 gg~~y~q~~VtItN~g~~~I 281 (341)
.++-++.|.|+|+|.+..++
T Consensus 30 ~~~y~FaY~ItI~N~~~~~v 49 (139)
T 1xq4_A 30 QQQYVFAYTVRITNTGSHPA 49 (139)
T ss_dssp GTBEEEEEEEEEEECSSSCE
T ss_pred CCEEEEEEEEEEEeCCCCCE
Confidence 35667999999999998765
No 26
>2g30_A AP-2 complex subunit beta-1; alpha-helical ARH peptide, platform domain, sandwich domain, endocytosis, adaptor, endocytosis/exocytosis complex; 1.60A {Homo sapiens} SCOP: b.1.10.1 d.105.1.1 PDB: 1e42_A 3h1z_A 3hs9_A 2iv9_A 2iv8_A
Probab=35.83 E-value=97 Score=28.32 Aligned_cols=63 Identities=14% Similarity=0.286 Sum_probs=41.8
Q ss_pred CceeEEEEEeccccc-CCeEEEEEEEEEEeCCCCceeeeEEEecCCCCCccccEEcCCceecCCccccCCCCCeEEE
Q 019436 247 GAIAIQQKLTTSWIS-NGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEF 322 (341)
Q Consensus 247 ~~v~i~q~v~~sW~~-gg~~y~q~~VtItN~g~~~I~~~~i~~~~l~~~iWnv~~~~n~~tLPs~~~~I~pG~S~tF 322 (341)
..++|+ ++|.. +|+ ..++++++|++..+|+++.|.+.+ ..-|+.-... ..+| ..|.||+|.+.
T Consensus 42 ~GLeI~----g~f~r~~g~--i~l~l~~~N~s~~~is~faIQfNk---NsFGL~p~~~-~~~~---~~L~pgqs~~v 105 (258)
T 2g30_A 42 KGLEIS----GTFTHRQGH--IYMEMNFTNKALQHMTDFAIQFNK---NSFGVIPSTP-LAIH---TPLMPNQSIDV 105 (258)
T ss_dssp TTEEEE----EEEEEETTE--EEEEEEEEECSSSCBCCCEEEECC---BTTCCEESSC-CCCC---SCBCTTCEEEE
T ss_pred CcEEEE----EEEEEeCCE--EEEEEEEecCCccceeeeEEEEcc---cccCcccCcc-ccCC---CccCCCCcEEE
Confidence 566664 55553 344 568899999999999999999985 3445543321 1222 34899997663
No 27
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=34.69 E-value=49 Score=27.22 Aligned_cols=20 Identities=20% Similarity=0.318 Sum_probs=16.7
Q ss_pred CCeEEEEEEEEEEeCCCCce
Q 019436 262 NGKRYYRYSTIVTNKSAKTL 281 (341)
Q Consensus 262 gg~~y~q~~VtItN~g~~~I 281 (341)
.++-++.|.|+|+|.+..++
T Consensus 25 ~~~y~faY~I~I~N~~~~~v 44 (126)
T 1xvs_A 25 YQRFVFAYLITIKNLSSQTV 44 (126)
T ss_dssp GTBEEEEEEEEEEECSSSCE
T ss_pred CCEEEEEEEEEEEECCCCCE
Confidence 35668999999999998765
No 28
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=33.64 E-value=47 Score=27.35 Aligned_cols=19 Identities=26% Similarity=0.410 Sum_probs=16.3
Q ss_pred CeEEEEEEEEEEeCCCCce
Q 019436 263 GKRYYRYSTIVTNKSAKTL 281 (341)
Q Consensus 263 g~~y~q~~VtItN~g~~~I 281 (341)
++-++.|.|+|+|.+..++
T Consensus 27 ~~y~faY~I~I~N~~~~~v 45 (127)
T 2f1e_A 27 GRYAFAYSIRIQNAGAVPA 45 (127)
T ss_dssp TBEEEEEEEEEEECSSSCE
T ss_pred CEEEEEEEEEEEeCCCCCE
Confidence 5667999999999998766
No 29
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=26.13 E-value=2.2e+02 Score=23.07 Aligned_cols=22 Identities=18% Similarity=0.238 Sum_probs=18.9
Q ss_pred EEEEEEEEeCCCCceeeeEEEe
Q 019436 267 YRYSTIVTNKSAKTLKNLKLSI 288 (341)
Q Consensus 267 ~q~~VtItN~g~~~I~~~~i~~ 288 (341)
....|+|+|.|..+..++.+.+
T Consensus 35 ~ti~vtV~N~G~~~a~~~~V~l 56 (127)
T 3idu_A 35 AEYEVHVKNLGGIGVPSTKVRV 56 (127)
T ss_dssp EEEEEEEEECSSSCEEEEEEEE
T ss_pred EEEEEEEEECCCCccCCcEEEE
Confidence 5789999999999998877754
No 30
>3jt0_A Lamin-B1; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, HR5546A, LMNB1_human; 2.39A {Homo sapiens}
Probab=24.06 E-value=84 Score=26.37 Aligned_cols=40 Identities=20% Similarity=0.410 Sum_probs=26.8
Q ss_pred EEEEeCCCCc--eeeeEEEecCCCCCccccEEcCC---ceecCCccccCCCCCeEEE
Q 019436 271 TIVTNKSAKT--LKNLKLSISKLYGPLWGLTNLGN---AYGFPSWLNNLAAGKSLEF 322 (341)
Q Consensus 271 VtItN~g~~~--I~~~~i~~~~l~~~iWnv~~~~n---~~tLPs~~~~I~pG~S~tF 322 (341)
|.|+|++.++ |.+|.|.-. .++ .|+||+-. .|+||++++.
T Consensus 40 V~L~N~s~~~~~LgGW~L~r~-----------v~g~~~~y~FP~~~-~L~pg~~VtV 84 (144)
T 3jt0_A 40 IRLKNTSEQDQPMGGWEMIRK-----------IGDTSVSYKYTSRY-VLKAGQTVTI 84 (144)
T ss_dssp EEEEECSSSCEECTTCEEEEE-----------ETTEEEEEECCTTC-EECTTCEEEE
T ss_pred EEEEECCCCceecCCcEEEEE-----------eCCCceEEEcCCCc-EECCCCEEEE
Confidence 8999999754 345544311 121 39998754 6999999885
No 31
>3cfu_A Uncharacterized lipoprotein YJHA; YJHA_bacsu, SR562, NESG, structural genomics, PSI-2, protein structure initiative; 2.40A {Bacillus subtilis}
Probab=21.59 E-value=67 Score=27.14 Aligned_cols=62 Identities=10% Similarity=-0.020 Sum_probs=34.1
Q ss_pred CCeEEEEEEEEEEeCCCCcee----eeEEEecCCCCCccccEEcCCcee-cCCcc-ccCCCCCeEEEEEEeC
Q 019436 262 NGKRYYRYSTIVTNKSAKTLK----NLKLSISKLYGPLWGLTNLGNAYG-FPSWL-NNLAAGKSLEFVYIHT 327 (341)
Q Consensus 262 gg~~y~q~~VtItN~g~~~I~----~~~i~~~~l~~~iWnv~~~~n~~t-LPs~~-~~I~pG~S~tFGYI~~ 327 (341)
.|..|..++|+|+|+|..++. ++.|.-.. +..-..+... .. -.... ..|+||.+.+.-.+-.
T Consensus 44 ~G~~fviV~VTIeN~g~e~~~~s~~~F~L~d~d--G~~~~~~~~~--~~~~~~l~~g~L~pG~kvtG~ivFe 111 (159)
T 3cfu_A 44 DDEERLIIEVTMENIGEDSISYNFIGFDLRDKN--DQSVRPVFSI--EEKGRILMGGTLVSGKKVTGVLSYV 111 (159)
T ss_dssp CCSEEEEEEEEEEECSSSCEEEEGGGEEEECTT--CCBCCCEECS--TTTTTBCCEEEECTTCEEEEEEEEE
T ss_pred CCCEEEEEEEEEEECCCCceeeCcccEEEEeCC--CCEEeceeee--cccCCcccccccCCCCEEEEEEEEE
Confidence 457899999999999987653 23332111 1111111100 00 01122 5899999998665533
No 32
>3hn9_A Lamin-B1; structural genomics, structural genomics consortium, SGC, acetylation, chromosomal rearrangement, coiled coil, intermediate filament; 2.00A {Homo sapiens} PDB: 3umn_A 2kpw_A
Probab=21.21 E-value=1.1e+02 Score=24.85 Aligned_cols=40 Identities=20% Similarity=0.416 Sum_probs=26.2
Q ss_pred EEEEeCCCCc--eeeeEEEecCCCCCccccEEcCC---ceecCCccccCCCCCeEEE
Q 019436 271 TIVTNKSAKT--LKNLKLSISKLYGPLWGLTNLGN---AYGFPSWLNNLAAGKSLEF 322 (341)
Q Consensus 271 VtItN~g~~~--I~~~~i~~~~l~~~iWnv~~~~n---~~tLPs~~~~I~pG~S~tF 322 (341)
|.|+|++.++ |.+|.|.- +.++ .|+||+-. .|+||++++.
T Consensus 27 V~L~N~s~~~~~L~gW~l~r-----------~v~~~~~~y~Fp~~~-~L~pg~~vtV 71 (123)
T 3hn9_A 27 IRLKNTSEQDQPMGGWEMIR-----------KIGDTSVSYKYTSRY-VLKAGQTVTI 71 (123)
T ss_dssp EEEEECSSSCEECTTCEEEE-----------EETTEEEEEECCTTC-EECTTCEEEE
T ss_pred EEEEECCCCceecCCcEEEE-----------EeCCCceEEEcCCCc-EECCCCEEEE
Confidence 8999998754 34444421 1222 49998653 6999999885
No 33
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=20.95 E-value=69 Score=30.26 Aligned_cols=18 Identities=11% Similarity=0.193 Sum_probs=15.9
Q ss_pred ChHHHHHHHHhcchhhhC
Q 019436 82 APAELLGFAKSQVDYILG 99 (341)
Q Consensus 82 ~~~~~~~~A~~QidYiLG 99 (341)
++.+|+++|++..+++..
T Consensus 167 gd~~Yl~~A~~~~~w~~~ 184 (349)
T 3k7x_A 167 NETKYLEWAMKTYEWQTK 184 (349)
T ss_dssp CCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHh
Confidence 568999999999999975
No 34
>2xbt_A Cellulosomal scaffoldin; sugar binding protein; 1.83A {Bacteroides cellulosolvens}
Probab=20.53 E-value=1.6e+02 Score=24.97 Aligned_cols=41 Identities=5% Similarity=0.062 Sum_probs=26.6
Q ss_pred CCceeEEEEEecccccCCeEEEEEEEEEEeCCCCce--eeeEEEe
Q 019436 246 SGAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTL--KNLKLSI 288 (341)
Q Consensus 246 ~~~v~i~q~v~~sW~~gg~~y~q~~VtItN~g~~~I--~~~~i~~ 288 (341)
+..|.+..+. +....+ ....+..++|+|++..+| ++++|+-
T Consensus 7 ~~~l~V~y~~-~~~~~~-~n~i~~~~~I~N~g~~~i~Ls~lkiRY 49 (160)
T 2xbt_A 7 NSDLKLLFSN-NGAAAS-SNQIYMNMKLQNTGSSTYDLSKITIRY 49 (160)
T ss_dssp CCSEEEEEEC-TTCCSE-ESSEEEEEEEEECSSCCEEGGGEEEEE
T ss_pred CCeEEEEEEe-CCCCCC-CCEEEEEEEEEECCCCceecCcEEEEE
Confidence 3677776654 333211 223889999999999876 5777643
Done!