RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= 019437
(341 letters)
>gnl|CDD|215147 PLN02262, PLN02262, fructose-1,6-bisphosphatase.
Length = 340
Score = 737 bits (1903), Expect = 0.0
Identities = 315/340 (92%), Positives = 327/340 (96%)
Query: 1 MDHEADAHRTDLMTITRFVLNEQSKHPESRGDFSILLSHIVLGCKFVCSAVNKAGLAKLI 60
MDH ADAHRTDLMTITRFVLNEQSKHPE+RGD +ILLSHIVLGCKFVCSAVNKAGLAKLI
Sbjct: 1 MDHAADAHRTDLMTITRFVLNEQSKHPEARGDLTILLSHIVLGCKFVCSAVNKAGLAKLI 60
Query: 61 GLAGETNVQGEEQKKLDVLSNDVFVKALISSGRTCILVSEEDEEAIFVEPSKRGRYCVVF 120
GLAGETNVQGEEQKKLDVLSNDVF+KAL+SSGRT +LVSEEDEEAIFVEPSKRGRYCVVF
Sbjct: 61 GLAGETNVQGEEQKKLDVLSNDVFIKALVSSGRTNVLVSEEDEEAIFVEPSKRGRYCVVF 120
Query: 121 DPLDGSSNIDCGVSIGTIFGIYMMKDSHEPTLDDVLQPGNNMLAAGYCMYGSSCTLVLST 180
DPLDGSSNIDCGVSIGTIFGIYM+KD E T++DVLQPG M+AAGYCMYGSSCTLVLST
Sbjct: 121 DPLDGSSNIDCGVSIGTIFGIYMLKDGGEGTVEDVLQPGKEMVAAGYCMYGSSCTLVLST 180
Query: 181 GSGVNGFTLDPSLGEFILTHPDIKIPKKGKIYSVNEGNAKNWDGPTAKYVEKCKFPKDGS 240
G GVNGFTLDPSLGEFILTHPDIKIPKKGKIYSVNEGNAKNWDGPTAKYVEKCKFPKDGS
Sbjct: 181 GGGVNGFTLDPSLGEFILTHPDIKIPKKGKIYSVNEGNAKNWDGPTAKYVEKCKFPKDGS 240
Query: 241 SPKSLRYIGSMVADVHRTLLYGGIFMYPRDKKSPNGKLRVLYEVFPMSFLMEQAGGQSFT 300
SPKSLRYIGSMVADVHRTLLYGGIF+YP DKKSPNGKLRVLYEVFPMSFL+EQAGGQ+FT
Sbjct: 241 SPKSLRYIGSMVADVHRTLLYGGIFLYPADKKSPNGKLRVLYEVFPMSFLVEQAGGQAFT 300
Query: 301 GKQRALDLVPKKIHERSPIFLGSYDDVEEIKALYAAEEKK 340
GKQRALDLVP KIHERSPIFLGSYDDVEEIKALYAAE K
Sbjct: 301 GKQRALDLVPTKIHERSPIFLGSYDDVEEIKALYAAEAAK 340
>gnl|CDD|238214 cd00354, FBPase, Fructose-1,6-bisphosphatase, an enzyme that
catalyzes the hydrolysis of fructose-1,6-biphosphate
into fructose-6-phosphate and is critical in
gluconeogenesis pathway. The alignment model also
includes chloroplastic FBPases and
sedoheptulose-1,7-biphosphatases that play a role in
pentose phosphate pathway (Calvin cycle).
Length = 315
Score = 548 bits (1415), Expect = 0.0
Identities = 190/315 (60%), Positives = 236/315 (74%)
Query: 20 LNEQSKHPESRGDFSILLSHIVLGCKFVCSAVNKAGLAKLIGLAGETNVQGEEQKKLDVL 79
L EQ + + GD + LLS + L CK + AV +AGLA L+GLAG NVQG+EQKKLDVL
Sbjct: 1 LLEQLRKGAATGDLTDLLSSLALACKEISRAVRRAGLAGLLGLAGSVNVQGDEQKKLDVL 60
Query: 80 SNDVFVKALISSGRTCILVSEEDEEAIFVEPSKRGRYCVVFDPLDGSSNIDCGVSIGTIF 139
+ND+F++AL SSG +L SEE+EE + VE SK G+Y V FDPLDGSSNID VS+GTIF
Sbjct: 61 ANDIFIEALKSSGVVAVLASEEEEEPVPVEESKDGKYLVAFDPLDGSSNIDANVSVGTIF 120
Query: 140 GIYMMKDSHEPTLDDVLQPGNNMLAAGYCMYGSSCTLVLSTGSGVNGFTLDPSLGEFILT 199
IY + T D LQPG N +AAGY +YG S LVL+ G GV+GFTLDPSLGEFILT
Sbjct: 121 SIYPGPSGADATEKDFLQPGRNQVAAGYALYGPSTMLVLTLGQGVHGFTLDPSLGEFILT 180
Query: 200 HPDIKIPKKGKIYSVNEGNAKNWDGPTAKYVEKCKFPKDGSSPKSLRYIGSMVADVHRTL 259
HP++KIPKKGKIYS+NEGN + WD P KY++ CK +DG P +LRYIGSMVADVHR L
Sbjct: 181 HPNVKIPKKGKIYSINEGNYRYWDEPVKKYIDDCKAGEDGGKPYNLRYIGSMVADVHRIL 240
Query: 260 LYGGIFMYPRDKKSPNGKLRVLYEVFPMSFLMEQAGGQSFTGKQRALDLVPKKIHERSPI 319
+ GGIF+YP DKKSP GKLR+LYE PM+FL+EQAGG++ GK+R LD+VP +H+R P+
Sbjct: 241 VRGGIFLYPADKKSPKGKLRLLYEANPMAFLVEQAGGKATDGKERILDIVPTSLHQRVPV 300
Query: 320 FLGSYDDVEEIKALY 334
LGS ++VE ++
Sbjct: 301 ILGSKEEVERVEEYL 315
>gnl|CDD|215854 pfam00316, FBPase, Fructose-1-6-bisphosphatase.
Length = 325
Score = 501 bits (1291), Expect = e-180
Identities = 177/323 (54%), Positives = 233/323 (72%), Gaps = 2/323 (0%)
Query: 13 MTITRFVLNEQSKHPESRGDFSILLSHIVLGCKFVCSAVNKAGLAKLIGLAGETNVQGEE 72
MT+TRF++ EQ + + G+ + LLS + L KF+ A+ +AGLA L+G AG TNVQG+E
Sbjct: 1 MTLTRFIIEEQLE-EFATGELTDLLSSLALAAKFIARAIRRAGLANLLGGAGGTNVQGDE 59
Query: 73 QKKLDVLSNDVFVKALISSGRTCILVSEEDEEAIFVEPSKRGRYCVVFDPLDGSSNIDCG 132
QKKLDVL++D+F AL +SG +L SEE +E + +E ++ G+Y V FDPLDGSSNID
Sbjct: 60 QKKLDVLADDLFRAALKASGAVAVLASEEQDELVVLEGNEEGKYAVAFDPLDGSSNIDTN 119
Query: 133 VSIGTIFGIYMMKDSHEPTLDDVLQPGNNMLAAGYCMYGSSCTLVLSTGSGVNGFTLDPS 192
VS+GTIF IY PT D LQPG +AAGY +YG S LVL+ G GV+GFTLDP
Sbjct: 120 VSVGTIFSIYPRVSGDSPTTIDFLQPGREQVAAGYVIYGPSTMLVLTLGCGVHGFTLDPD 179
Query: 193 LGEFILTHPDIKIPKKGKIYSVNEGNAKNWDGPTAKYVEKCKFPKDGSS-PKSLRYIGSM 251
LGEFIL +KIP++GKI+S+NEGN ++WD P KY++ CK DG P ++RYIGSM
Sbjct: 180 LGEFILVDETVKIPEEGKIFSINEGNYRHWDPPVRKYIDDCKAGDDGPRRPYNMRYIGSM 239
Query: 252 VADVHRTLLYGGIFMYPRDKKSPNGKLRVLYEVFPMSFLMEQAGGQSFTGKQRALDLVPK 311
VADVHR LL GGIF+YP DK+ PNGKLR+LYE PM+FL+EQAGG + G++R LD+VP
Sbjct: 240 VADVHRILLKGGIFLYPGDKRYPNGKLRLLYECAPMAFLIEQAGGGATDGRKRILDIVPT 299
Query: 312 KIHERSPIFLGSYDDVEEIKALY 334
++H+R+P LGS D+V + +
Sbjct: 300 RLHQRTPFILGSIDEVARFEEYH 322
>gnl|CDD|236458 PRK09293, PRK09293, fructose-1,6-bisphosphatase; Provisional.
Length = 327
Score = 470 bits (1213), Expect = e-168
Identities = 171/327 (52%), Positives = 232/327 (70%), Gaps = 5/327 (1%)
Query: 11 DLMTITRFVLNEQSKHPESRGDFSILLSHIVLGCKFVCSAVNKAGLAKLIGLAGETNVQG 70
+ T+ F++ +Q + P + G+ + L+S I L K + A+NK GLA ++G AG NVQG
Sbjct: 1 SMKTLGEFLVEQQREFPHATGELTALISAIALAAKIISRAINKGGLADILGAAGTENVQG 60
Query: 71 EEQKKLDVLSNDVFVKALISSGRTCILVSEEDEEAIFVEPSKRGRYCVVFDPLDGSSNID 130
E QKKLDV +N++ ++AL + G L SEE++E + + P G+Y V +DPLDGSSNID
Sbjct: 61 ETQKKLDVFANEILIEALKARGHVAGLASEEEDEIVPI-PENEGKYLVAYDPLDGSSNID 119
Query: 131 CGVSIGTIFGIYMMKDSHEPTLDDVLQPGNNMLAAGYCMYGSSCTLVLSTGSGVNGFTLD 190
VS+GTIF IY PT +D LQPGNN +AAGY +YG S LVL+TG GV+GFTLD
Sbjct: 120 VNVSVGTIFSIYR-APVGTPTEEDFLQPGNNQVAAGYVLYGPSTMLVLTTGDGVHGFTLD 178
Query: 191 PSLGEFILTHPDIKIPKKGKIYSVNEGNAKNWDGPTAKYVEKCKFPKDGSSPK--SLRYI 248
PSLGEF+LTH +I+IP+ GK Y++NEGN ++W+ KY+E KDG + ++RYI
Sbjct: 179 PSLGEFVLTHENIRIPEDGKEYAINEGNQRHWEPGVKKYIELLA-GKDGPRGRPYNMRYI 237
Query: 249 GSMVADVHRTLLYGGIFMYPRDKKSPNGKLRVLYEVFPMSFLMEQAGGQSFTGKQRALDL 308
GSMVADVHR LL GGIF+YP D+ PNGKLR+LYE PM+FL+EQAGG + GKQR LD+
Sbjct: 238 GSMVADVHRILLKGGIFLYPADEPYPNGKLRLLYEANPMAFLVEQAGGAASDGKQRILDI 297
Query: 309 VPKKIHERSPIFLGSYDDVEEIKALYA 335
P+ +H+R P+FLGS ++VE ++ +A
Sbjct: 298 EPESLHQRVPLFLGSKEEVERVEEYHA 324
>gnl|CDD|223236 COG0158, Fbp, Fructose-1,6-bisphosphatase [Carbohydrate transport
and metabolism].
Length = 326
Score = 442 bits (1139), Expect = e-157
Identities = 168/326 (51%), Positives = 229/326 (70%), Gaps = 3/326 (0%)
Query: 13 MTITRFVLNEQSKHPESRGDFSILLSHIVLGCKFVCSAVNKAGLAKLIGLAGETNVQGEE 72
T+ RF++ +Q + + + S +LS I L K + +NKAGLA ++G +G NVQG+
Sbjct: 2 KTLGRFLVEKQKEFKAATAELSAVLSSIALAGKEIAREINKAGLAGVLGYSGAENVQGDT 61
Query: 73 QKKLDVLSNDVFVKALISSGRTCILVSEEDEEAIFVEPSKRGRYCVVFDPLDGSSNIDCG 132
QKKLDV +N++ ++AL + G + SEE E+ P G Y V +DPLDGSSNID
Sbjct: 62 QKKLDVFANEILIEALKARGNVAGIASEE-EDEPVTFPENNGSYAVAYDPLDGSSNIDVN 120
Query: 133 VSIGTIFGIYMMKDSHEPTLDDVLQPGNNMLAAGYCMYGSSCTLVLSTGSGVNGFTLDPS 192
VS+GTIF IY + T +D LQPGN +AAGY +YG S LV + G GV+GFTLDPS
Sbjct: 121 VSVGTIFSIYR-RPGSPGTEEDFLQPGNKQVAAGYVVYGPSTMLVYTLGEGVHGFTLDPS 179
Query: 193 LGEFILTHPDIKIPKKGKIYSVNEGNAKNWDGPTAKYVEKCKFPKDGSS-PKSLRYIGSM 251
LGEFILTH +I+IP+KGKIY++NEGN ++W+ KY++ C G+ P ++RYIGSM
Sbjct: 180 LGEFILTHENIRIPEKGKIYAINEGNQRHWEEGVKKYIKDCFAEDKGTRRPYNMRYIGSM 239
Query: 252 VADVHRTLLYGGIFMYPRDKKSPNGKLRVLYEVFPMSFLMEQAGGQSFTGKQRALDLVPK 311
VADVHR LL GGIF+YP DK++PNGKLR+LYE PM+FL+EQAGG++ GKQR LD+VP+
Sbjct: 240 VADVHRILLKGGIFLYPSDKRAPNGKLRLLYEANPMAFLVEQAGGKATDGKQRILDIVPE 299
Query: 312 KIHERSPIFLGSYDDVEEIKALYAAE 337
K+H+R P+FLGS ++VE+++
Sbjct: 300 KLHQRVPLFLGSKEEVEKLERFIKEF 325
>gnl|CDD|215298 PLN02542, PLN02542, fructose-1,6-bisphosphatase.
Length = 412
Score = 388 bits (997), Expect = e-134
Identities = 176/339 (51%), Positives = 231/339 (68%), Gaps = 15/339 (4%)
Query: 11 DLMTITRFVLNEQSKHPESRGDFSILLSHIVLGCKFVCSAVNKAGLAKLIGLAGETNVQG 70
++ T+T ++L +Q + + +I+LS I + CK + S V +AG++ L G+ G N+QG
Sbjct: 75 EIQTLTTWLL-KQEQAGVIDAELTIVLSSISMACKQIASLVQRAGISNLTGVQGAVNIQG 133
Query: 71 EEQKKLDVLSNDVFVKALISSGRTCILVSEEDEEAIFVEPSKRGRYCVVFDPLDGSSNID 130
E+QKKLDV+SN+VF L SSGRT I+ SEE++ + VE S G Y VVFDPLDGSSNID
Sbjct: 134 EDQKKLDVISNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNID 193
Query: 131 CGVSIGTIFGIY------MMKDSHEPTLD--------DVLQPGNNMLAAGYCMYGSSCTL 176
VS G+IFGIY + + TLD +V QPG+N+LAAGYCMY SS
Sbjct: 194 AAVSTGSIFGIYSPNDECLADIGDDSTLDSVEQRCIVNVCQPGSNLLAAGYCMYSSSVIF 253
Query: 177 VLSTGSGVNGFTLDPSLGEFILTHPDIKIPKKGKIYSVNEGNAKNWDGPTAKYVEKCKFP 236
VL+ G+GV FTLDP GEF+LT +I+IPK GKIYS NEGN + WD KY++ K P
Sbjct: 254 VLTIGTGVFSFTLDPMYGEFVLTQENIQIPKAGKIYSFNEGNYQLWDDKLKKYIDDLKDP 313
Query: 237 KDGSSPKSLRYIGSMVADVHRTLLYGGIFMYPRDKKSPNGKLRVLYEVFPMSFLMEQAGG 296
P S RYIGS+V D HRTLLYGGI+ YPRDKKS NGKLR+LYE PMSF++EQAGG
Sbjct: 314 GPSGKPYSARYIGSLVGDFHRTLLYGGIYGYPRDKKSKNGKLRLLYECAPMSFIVEQAGG 373
Query: 297 QSFTGKQRALDLVPKKIHERSPIFLGSYDDVEEIKALYA 335
+ G QR LD+ P +IH+R P+++GS ++VE+++ A
Sbjct: 374 KGSDGHQRILDIQPTEIHQRVPLYIGSVEEVEKLEKYLA 412
>gnl|CDD|215337 PLN02628, PLN02628, fructose-1,6-bisphosphatase family protein.
Length = 351
Score = 284 bits (728), Expect = 2e-94
Identities = 140/313 (44%), Positives = 201/313 (64%), Gaps = 21/313 (6%)
Query: 32 DFSILLSHIVLGCKFVCSAV---NKAGLAKLIGLAGETNVQGEEQKK-LDVLSNDVFVKA 87
D +L++HI CK + + + + L K A + G + K LD++SN++ + +
Sbjct: 34 DLVVLMAHIQAACKRIAALLASPFNSELGKTSSGASGASGSGRDAPKPLDIVSNEIILSS 93
Query: 88 LISSGRTCILVSEEDEEAIFVEPSKRGRYCVVFDPLDGSSNIDCGVSIGTIFGIY--MMK 145
L +SG+ ++ SEED+ I++ G Y VVFDPLDGS NID + GTIFGIY +++
Sbjct: 94 LRNSGKVAVMASEEDDAPIWI--GDDGPYVVVFDPLDGSRNIDASIPTGTIFGIYNRLVE 151
Query: 146 DSHEPTLD----DVLQPGNNMLAAGYCMYGSSCTLVLSTGSGVNGFTLDPSLGEFILTHP 201
H P + +VLQ G+ ++AAGY +Y S+ L +S GSG +GFTLD S GEF+LTHP
Sbjct: 152 ADHLPVEEKAQLNVLQRGSRLVAAGYVLYSSATILCISFGSGTHGFTLDHSTGEFVLTHP 211
Query: 202 DIKIPKKGKIYSVNEGNAKNWDGPTAKYVEKCKFPKDGSSPK--SLRYIGSMVADVHRTL 259
DIKIP++G+IYSVN+ +W KY++ + K G PK S RYI S+VAD+HRT+
Sbjct: 212 DIKIPERGQIYSVNDARYFDWPEGLRKYIDTVRQGK-GQYPKKYSARYICSLVADLHRTI 270
Query: 260 LYGGIFMYPRDKKSPNGKLRVLYEVFPMSFLMEQAGGQSFTGKQRALDLVPKKIHERSPI 319
LYGGI M PR LR++YE P+SFL+EQAGG+ GK+R L + P K+H+R P+
Sbjct: 271 LYGGIAMNPRS------HLRLVYEANPLSFLVEQAGGRGSDGKRRILSIQPVKLHQRLPL 324
Query: 320 FLGSYDDVEEIKA 332
FLGS +DV E+++
Sbjct: 325 FLGSSEDVLELES 337
>gnl|CDD|215256 PLN02462, PLN02462, sedoheptulose-1,7-bisphosphatase.
Length = 304
Score = 129 bits (326), Expect = 4e-35
Identities = 88/281 (31%), Positives = 134/281 (47%), Gaps = 32/281 (11%)
Query: 59 LIGLAGETNVQGEEQKKLDVLSNDVFVKALISSGRTCILVSEEDEEAIFVEPSKRGRYCV 118
N G+EQ +D+L++ + +AL S SEE E + G + V
Sbjct: 37 SCTGTACVNSFGDEQLAVDMLADKLLFEALKYSHVCKYACSEEVPEVQDMGGPVEGGFSV 96
Query: 119 VFDPLDGSSNIDCGVSIGTIFGIYMMKDSHEPTLDDVLQPGNNMLAAGYCMYGSSCTLV- 177
FDPLDGSS +D ++GTIFG++ T G + +AA +YG T V
Sbjct: 97 AFDPLDGSSIVDTNFAVGTIFGVWPGDKLTGVT-------GRDQVAAAMGIYGPRTTYVV 149
Query: 178 -LSTGSGVNGFTLDPSLGEFILTHPDIKIPKKGKIYSVNEGNAK-NWDGPTAK-----YV 230
L G G + F L G++ +I +GKI+S GN + +D P + YV
Sbjct: 150 ALKDGPGTHEFLLLDD-GKWQHVKETTEI-GEGKIFS--PGNLRATFDNPGYEKLINYYV 205
Query: 231 EKCKFPKDGSSPKSLRYIGSMVADVHRTLLY-GGIFMYPRDKKSPNGKLRVLYEVFPMSF 289
+ K+ +LRY G MV DV++ ++ G+F KS KLR+L+EV P+
Sbjct: 206 SE-KY--------TLRYTGGMVPDVYQIIVKEKGVFTNVTSPKSK-AKLRLLFEVAPLGL 255
Query: 290 LMEQAGGQSFTGKQR--ALDLVPKKIHERSPIFLGSYDDVE 328
L+E+AGG+S G Q LD + +R+ + GS ++V
Sbjct: 256 LVEKAGGKSSDGVQGGSVLDKQINNLDQRTQVAYGSKNEVI 296
>gnl|CDD|238814 cd01636, FIG, FIG, FBPase/IMPase/glpX-like domain. A superfamily of
metal-dependent phosphatases with various substrates.
Fructose-1,6-bisphospatase (both the major and the
glpX-encoded variant) hydrolyze
fructose-1,6,-bisphosphate to fructose-6-phosphate in
gluconeogenesis. Inositol-monophosphatases and inositol
polyphosphatases play vital roles in eukaryotic
signalling, as they participate in metabolizing the
messenger molecule Inositol-1,4,5-triphosphate. Many of
these enzymes are inhibited by Li+.
Length = 184
Score = 66.3 bits (162), Expect = 5e-13
Identities = 31/119 (26%), Positives = 48/119 (40%), Gaps = 9/119 (7%)
Query: 46 FVCSAVNKAGLA-------KLIGLAGETNVQGEEQKKLDVLSNDVFVKALISSGRTCILV 98
+C +AGLA +L G T + DV + + L SS +V
Sbjct: 3 ELCRVAKEAGLAILKAFGRELSGKVKITKSDNDPVTTADVAAETLIRNMLKSSFPDVKIV 62
Query: 99 SEEDEEAIFVEPSKRGRYCVVFDPLDGSSN-IDCGVSIGTIFGIYMMKDSHEPTLDDVL 156
EE A V +R Y V DP+DG+ N I+ + + +Y++ EP+ V
Sbjct: 63 GEESGVAEEVM-GRRDEYTWVIDPIDGTKNFINGLPFVAVVIAVYVILILAEPSHKRVD 120
>gnl|CDD|183673 PRK12676, PRK12676, bifunctional inositol-1
monophosphatase/fructose-1,6-bisphosphatase; Reviewed.
Length = 263
Score = 51.1 bits (123), Expect = 2e-07
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 44 CKFVCSAVNKAGLAKLIGL--AGET---NVQGEEQKKLDVLSNDVFVKALISSGRTCILV 98
C + V KA + L G AGET G K +D ++ D+ ++ L GR ++
Sbjct: 10 CDDMAKEVEKA-IMPLFGTPDAGETVGMGADGTPTKLIDKVAEDIILEVLKPLGRCVNII 68
Query: 99 SEEDEEAIFVEPSKRGRYCVVFDPLDGSSN 128
SEE E + P Y VV DPLDG+ N
Sbjct: 69 SEELGEIVGNGPE----YTVVLDPLDGTYN 94
>gnl|CDD|238820 cd01642, Arch_FBPase_2, Putative fructose-1,6-bisphosphatase or
related enzymes of inositol monophosphatase family.
These are Mg++ dependent phosphatases. Members in this
family may have fructose-1,6-bisphosphatase and/or
inositol-monophosphatase activity.
Fructose-1,6-bisphosphatase catalyzes the hydrolysis of
fructose-1,6-biphosphate into fructose-6-phosphate and
is critical in gluconeogenesis pathway.
Length = 244
Score = 45.5 bits (108), Expect = 1e-05
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 14/90 (15%)
Query: 52 NKAGLAKLIGLAGETNVQGEEQKKLDVLSNDVFVKALISSGRTCILVSEEDEEAIFVEPS 111
N+ GL KLI AG G+ + D+ + ++ +K L G ++SEE + +
Sbjct: 20 NRQGLVKLIRGAG-----GDVTRVADLKAEEIILKLLREEGVFGQIISEE---SGEIRK- 70
Query: 112 KRGRYCVVFDPLDGSSNID-----CGVSIG 136
G Y V DPLDGS+N VS+
Sbjct: 71 GSGEYIAVLDPLDGSTNYLSGIPFYSVSVA 100
>gnl|CDD|238815 cd01637, IMPase_like, Inositol-monophosphatase-like domains. This
family of phosphatases is dependent on bivalent metal
ions such as Mg++, and many members are inhibited by Li+
(which is thought to displace a bivalent ion in the
active site). Substrates include
fructose-1,6-bisphosphate, inositol poly- and
monophosphates, PAP and PAPS,
sedoheptulose-1,7-bisphosphate and probably others.
Length = 238
Score = 44.6 bits (106), Expect = 2e-05
Identities = 38/258 (14%), Positives = 75/258 (29%), Gaps = 50/258 (19%)
Query: 46 FVCSAVNKAGLAKLIGLAGETNVQ-----GEEQKKLDVLSNDVFVKALISSGRTCILVSE 100
AV +AG L E V+ G+ + D+ + ++ V L + ++ E
Sbjct: 3 LALKAVREAGALILEAFGEELTVETKKGDGDLVTEADLAAEELIVDVLKALFPDDGILGE 62
Query: 101 EDEEAIFVEPSKRGRYCVVFDPLDGSSN-IDCGVSIGTIFGIYMMKDSHEPTLDDVLQPG 159
E + V R V DP+DG++N + + +Y + +P L + P
Sbjct: 63 EGGGSGNVSDGGRV---WVIDPIDGTTNFVAGLPNFAVSIALY---EDGKPVLGVIYDP- 115
Query: 160 NNMLAAGYCMYGSSCTLVLSTGSGVNGFTLDPSLGEFILTHPDIKIPKKGKIYSVNEGNA 219
Y G G L + + K +
Sbjct: 116 ----MLDELYYAGR-------GKGAF------------LNGKKLPLSKDTPLNDALLSTN 152
Query: 220 KNWDGPTAKYVEKCKFPKDGSSPKSLRYIGSMVADVHRTLLY-GGIFMYPRDKKSPNGKL 278
+ + + +R GS D+ ++
Sbjct: 153 ASM----LRSNRAAVLASLVNRALGIRIYGSAGLDLAYVAAGRLDAYLSSGLN------- 201
Query: 279 RVLYEVFPMSFLMEQAGG 296
++ + ++E+AGG
Sbjct: 202 --PWDYAAGALIVEEAGG 217
>gnl|CDD|238773 cd01515, Arch_FBPase_1, Archaeal fructose-1,6-bisphosphatase and
related enzymes of inositol monophosphatase family
(FBPase class IV). These are Mg++ dependent
phosphatases. Members in this family may have both
fructose-1,6-bisphosphatase and inositol-monophosphatase
activity. In hyperthermophilic archaea, inositol
monophosphatase is thought to play a role in the
biosynthesis of di-myo-inositol-1,1'-phosphate, an
osmolyte unique to hyperthermophiles.
Length = 257
Score = 36.2 bits (84), Expect = 0.017
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 70 GEEQKKLDVLSNDVFVKALISSGRTCILVSEEDEEAIFVEPSKRGRYCVVFDPLDGSSN 128
G K +D ++ D ++ L G +VSEE Y VV DPLDG+ N
Sbjct: 35 GTPTKLIDKVAEDAAIEILKKLGSV-NIVSEEIGVIDN---GDEPEYTVVLDPLDGTYN 89
>gnl|CDD|237601 PRK14076, pnk, inorganic polyphosphate/ATP-NAD kinase; Provisional.
Length = 569
Score = 34.7 bits (80), Expect = 0.067
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 70 GEEQKKLDVLSNDVFVKALISSGRTCILVSEEDEEAIFVEPSKRGRYCVVFDPLDGSSN 128
G K++D+++ ++ + +L IL+SEE + + Y V DP+DG+ N
Sbjct: 39 GTPTKRIDLIAENIAINSLEKFCSG-ILISEEIGFKKIGK--NKPEYIFVLDPIDGTYN 94
>gnl|CDD|223559 COG0483, SuhB, Archaeal fructose-1,6-bisphosphatase and related
enzymes of inositol monophosphatase family [Carbohydrate
transport and metabolism].
Length = 260
Score = 33.5 bits (77), Expect = 0.11
Identities = 28/114 (24%), Positives = 42/114 (36%), Gaps = 25/114 (21%)
Query: 50 AVNKAGLAKLIGLAGETNVQGEEQKK--------LDVLSNDVFVKALISSGRTCILVSEE 101
A KAG A ++ L E + E KK D + + L ++ ++ EE
Sbjct: 11 AARKAG-ALILPLFRELDAVEVEVKKSDGDPVTEADKAAERIIRARLRAAFPDHGILGEE 69
Query: 102 DEEAIFVEPSKRGRYCVVFDPLDGSSNI-----DCGVSIG------TIFG-IYM 143
A+ Y V DP+DG++N VSI + G IY
Sbjct: 70 SGGALG----GGDEYVWVIDPIDGTTNFVRGIPFFAVSIALVEDGEPVAGVIYD 119
>gnl|CDD|224139 COG1218, CysQ, 3'-Phosphoadenosine 5'-phosphosulfate (PAPS)
3'-phosphatase [Inorganic ion transport and metabolism].
Length = 276
Score = 31.9 bits (73), Expect = 0.37
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 97 LVSEEDEEAIFVEPSKRGRYCVVFDPLDG 125
+VSEE+E + E R+ +V DPLDG
Sbjct: 67 VVSEEEEAIDWEERLHWDRFWLV-DPLDG 94
>gnl|CDD|215930 pfam00459, Inositol_P, Inositol monophosphatase family.
Length = 269
Score = 32.0 bits (73), Expect = 0.42
Identities = 21/103 (20%), Positives = 39/103 (37%), Gaps = 12/103 (11%)
Query: 45 KFVCSAVNKAG------LAKLIGLAGETNVQGEEQKKLDVLSNDVFVKALISSGRTCILV 98
K KAG + + + +T+ + D + ++ ++AL + ++
Sbjct: 7 KIAVELARKAGEVLREAFSNDLTVEEKTSGSNDLVTAADKAAEELILEALAALFPGHPII 66
Query: 99 SEEDEEAIFVEPSKRGRYCVVFDPLDGSSN----IDC-GVSIG 136
EE E + + DP+DG+ N I VSIG
Sbjct: 67 GEETGAIGGTELT-DDGPTWIIDPIDGTKNFIRGIPQFAVSIG 108
>gnl|CDD|213680 TIGR02067, his_9_HisN, histidinol-phosphatase, inositol
monophosphatase family. This subfamily belongs to the
inositol monophosphatase family (pfam00459). The members
of this family consist of no more than one per species
and are found only in species in which histidine is
synthesized de novo but no histidinol phosphatase can be
found in either of the two described families
(TIGR01261, TIGR01856). In at least one species, the
member of this family is found near known histidine
biosynthesis genes. The role as histidinol-phosphatase
wsa first proven in Corynebacterium glutamicum [Amino
acid biosynthesis, Histidine family].
Length = 251
Score = 30.7 bits (70), Expect = 0.86
Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 5/44 (11%)
Query: 100 EEDEEAIFVEPSKRGRYCVVFDPLDGSSNIDCGVSI-GTIFGIY 142
EE E V DP+DG+ + GV + GT+ +
Sbjct: 63 EEFGHNE--EGD--AERVWVLDPIDGTKSFIRGVPVWGTLIALV 102
>gnl|CDD|176113 cd08421, PBP2_LTTR_like_1, The C-terminal substrate binding domain
of an uncharacterized LysR-type transcriptional
regulator, contains the type 2 periplasmic binding fold.
LysR-transcriptional regulators comprise the largest
family of prokaryotic transcription factor. Homologs of
some of LTTRs with similar domain organizations are also
found in the archaea and eukaryotic organisms. The LTTRs
are composed of two functional domains joined by a
linker helix involved in oligomerization: an N-terminal
HTH (helix-turn-helix) domain, which is responsible for
the DNA-binding specificity, and a C-terminal
substrate-binding domain, which is structurally
homologous to the type 2 periplasmic binding proteins.
As also observed in the periplasmic binding proteins,
the C-terminal domain of the bacterial transcriptional
repressor undergoes a conformational change upon
substrate binding which in turn changes the DNA binding
affinity of the repressor. The genes controlled by the
LTTRs have diverse functional roles including amino acid
biosynthesis, CO2 fixation, antibiotic resistance,
degradation of aromatic compounds, nodule formation of
nitrogen-fixing bacteria, and synthesis of virulence
factors, to a name a few. This substrate-binding domain
shows significant homology to the type 2 periplasmic
binding proteins (PBP2), which are responsible for the
uptake of a variety of substrates such as phosphate,
sulfate, polysaccharides, lysine/arginine/ornithine, and
histidine. The PBP2 bind their ligand in the cleft
between these domains in a manner resembling a Venus
flytrap. After binding their specific ligand with high
affinity, they can interact with a cognate membrane
transport complex comprised of two integral membrane
domains and two cytoplasmically located ATPase domains.
This interaction triggers the ligand translocation
across the cytoplasmic membrane energized by ATP
hydrolysis.
Length = 198
Score = 29.0 bits (66), Expect = 2.4
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 177 VLSTGSGVNGFTLDPSLGEFILTHPDIKI 205
+L+ S + F L L F+ HPD++I
Sbjct: 4 LLANTSAIVEF-LPEDLASFLAAHPDVRI 31
>gnl|CDD|130398 TIGR01331, bisphos_cysQ, 3'(2'),5'-bisphosphate nucleotidase,
bacterial. Sulfate is incorporated into
3-phosphoadenylylsulfate, PAPS, for utilization in
pathways such as methionine biosynthesis. Transfer of
sulfate from PAPS to an acceptor leaves adenosine
3'-5'-bisphosphate, APS. This model describes a form
found in bacteria of the enzyme 3'(2'),5'-bisphosphate
nucleotidase, which removes the 3'-phosphate from APS to
regenerate AMP and help drive the cycle [Central
intermediary metabolism, Sulfur metabolism].
Length = 249
Score = 28.6 bits (64), Expect = 4.3
Identities = 23/91 (25%), Positives = 32/91 (35%), Gaps = 18/91 (19%)
Query: 78 VLSNDVFVKALISSGRTCI-----LVSEEDEEAIFVEPSKRGRYCVVFDPLDGSS----- 127
V D I G + ++SEED R+ +V DPLDG+
Sbjct: 35 VTEADRAAHRFILEGLRALTPDIPVLSEEDASIPLTPRQTWQRFWLV-DPLDGTKEFINR 93
Query: 128 NIDCGVSIGTIFGIYMMKDSHEPTLDDVLQP 158
N D V+I + + P L V P
Sbjct: 94 NGDFTVNIALV-------EHGVPVLGVVYAP 117
>gnl|CDD|177245 MTH00199, ND2, NADH dehydrogenase subunit 2; Provisional.
Length = 460
Score = 28.1 bits (63), Expect = 7.5
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 37 LSHIVLGCKFVCSAVNKAGLAKLIGLAGETNVQG 70
L + VLG V S + G A L GL GET++QG
Sbjct: 151 LKYFVLGA--VSSGLFLFGCALLYGLTGETSIQG 182
>gnl|CDD|223007 PHA03187, PHA03187, UL14 tegument protein; Provisional.
Length = 322
Score = 28.0 bits (62), Expect = 8.3
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 291 MEQAGGQSFTGKQRALDLVPKKIHERSPIFLGSYDDVEE 329
+E+A + K R LDLV + + +RSP F+ ++ +E
Sbjct: 14 LEEAYQREMIFKMRTLDLVREGVDKRSPAFVRAFTSAKE 52
>gnl|CDD|215913 pfam00425, Chorismate_bind, chorismate binding enzyme. This family
includes the catalytic regions of the chorismate binding
enzymes anthranilate synthase, isochorismate synthase,
aminodeoxychorismate synthase and para-aminobenzoate
synthase.
Length = 254
Score = 27.5 bits (62), Expect = 8.8
Identities = 12/31 (38%), Positives = 13/31 (41%)
Query: 109 EPSKRGRYCVVFDPLDGSSNIDCGVSIGTIF 139
EP RG Y LD N D V+I T
Sbjct: 194 EPFDRGLYAGAVGWLDPDGNGDFAVAIRTAL 224
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.318 0.137 0.402
Gapped
Lambda K H
0.267 0.0702 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 17,417,478
Number of extensions: 1674635
Number of successful extensions: 1230
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1209
Number of HSP's successfully gapped: 25
Length of query: 341
Length of database: 10,937,602
Length adjustment: 98
Effective length of query: 243
Effective length of database: 6,590,910
Effective search space: 1601591130
Effective search space used: 1601591130
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (26.6 bits)