Query 019438
Match_columns 341
No_of_seqs 312 out of 1319
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 16:05:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019438.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019438hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3icu_A E3 ubiquitin-protein li 99.9 1.5E-22 5E-27 182.2 18.6 136 44-188 35-193 (194)
2 3iib_A Peptidase M28; YP_92679 99.1 4.9E-10 1.7E-14 112.0 12.5 108 74-181 101-224 (444)
3 2ek8_A Aminopeptidase; metallo 99.0 3.4E-09 1.2E-13 104.9 14.5 89 78-170 92-181 (421)
4 3fed_A Glutamate carboxypeptid 98.6 7.2E-08 2.4E-12 101.6 9.6 94 76-171 124-267 (707)
5 3kas_A Transferrin receptor pr 98.5 2.2E-07 7.5E-12 97.0 8.2 92 78-171 107-230 (640)
6 3i6s_A Subtilisin-like proteas 98.4 3E-07 1E-11 96.1 8.6 93 79-180 257-354 (649)
7 1y9z_A Alkaline serine proteas 98.3 1.1E-06 3.7E-11 87.5 9.3 116 90-216 258-390 (441)
8 1xf1_A C5A peptidase, SCP; hyd 98.2 6.8E-06 2.3E-10 89.1 12.1 90 80-180 261-351 (926)
9 3vta_A Cucumisin; subtilisin-l 92.4 0.16 5.5E-06 52.4 6.2 71 90-173 268-341 (621)
10 3gx8_A Monothiol glutaredoxin- 17.7 2.3E+02 0.0078 22.0 5.7 67 100-173 15-98 (121)
No 1
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=99.90 E-value=1.5e-22 Score=182.17 Aligned_cols=136 Identities=24% Similarity=0.349 Sum_probs=107.6
Q ss_pred EEEEeeeeec--C--CcceeEEeeeccCCCccccccCCceeEEEEecC---CCCCCCCCCC---C-------CCCcEEEE
Q 019438 44 VLVKVPTWVD--G--GEDTEYVGVGARFGRTLEAKEKDASQNRLVLAD---PPDCCSKPKN---K-------LTGEAILV 106 (341)
Q Consensus 44 ~lv~v~~w~~--g--~e~~~~~~~~A~FG~~lp~~~~~~~~~~Lv~~~---p~~aC~~~~~---~-------l~g~IaLV 106 (341)
..|.+ +|.| + +....+.+++|+||..+|.. +..+.|+.+. +.+||++.+. + .+||||||
T Consensus 35 A~vn~-sy~d~~~~~n~t~~~~~e~a~FG~~~p~~---~v~G~lv~~~~~~~~~GC~~~~~~~~~~~~~~~~~~gkIaLV 110 (194)
T 3icu_A 35 AYLNV-SWRVPHTGVNRTVWELSEEGVYGQDSPLE---PVAGVLVPPDGPGALNACNPHTNFTVPTVWGSTVQVSWLALI 110 (194)
T ss_dssp EEEEE-EEECCSSCTTCEEEEEEEEEEECTTSCCS---CEEEEEECBSSTTCTTCCSTTCCBCCCBCTTSSCBCCEEEEE
T ss_pred EEEEE-EEECCCCCccceeeecccccccCCCCCCC---CcEEEEEecCCCCCcCCCCCCccccCCcccccccCCCeEEEE
Confidence 44444 5554 3 55667899999999999875 4667777663 7899998762 1 36899999
Q ss_pred ecCC-CCHHHHHHHHHHcCCcEEEEEeCC-C--CceeeccCCCCCCCCccceEEEechhhHHHHHHHHHCCCEEEEEEe-
Q 019438 107 HRGG-CSFTAKANFAEEANASAILIINNK-T--ELFKMVCESNETDVDIRIPAIMLPQDAGANLEKLIKNNSVVSVQLY- 181 (341)
Q Consensus 107 ~RG~-CsF~~Ka~nAq~aGA~avLI~n~~-~--~l~~m~~~~~~~~~~i~IPvv~Is~~~G~~L~~~l~~G~~V~V~l~- 181 (341)
+||+ |+|.+|++|||++||+|+||||+. + .+..|... ...+||+++|++++|+.|+++|++|.+|+++|.
T Consensus 111 ~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~-----~~~~IPsv~Is~~~G~~L~~~L~~G~~Vtvti~v 185 (194)
T 3icu_A 111 QRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHP-----GAVDIVAIMIGNLKGTKILQSIQRGIQVTMVIEV 185 (194)
T ss_dssp ESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCT-----TCCSSEEEEECHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCC-----CCCceeEEEECHHHHHHHHHHHHCCCeEEEEEEC
Confidence 9999 999999999999999999999984 2 34566532 134799999999999999999999999998886
Q ss_pred -cCCCCCc
Q 019438 182 -SPRRPVV 188 (341)
Q Consensus 182 -sp~~p~~ 188 (341)
+.+.||+
T Consensus 186 g~~h~pw~ 193 (194)
T 3icu_A 186 GKKHGPWV 193 (194)
T ss_dssp EEEECCCC
T ss_pred CCccCCCC
Confidence 3445554
No 2
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=99.09 E-value=4.9e-10 Score=112.03 Aligned_cols=108 Identities=16% Similarity=0.141 Sum_probs=79.6
Q ss_pred ccCCceeEEEEecCCCCCCCCCC-CCCCCcEEEEecCCCC---------HHHH----HHHHHHcCCcEEEEEeCCCCcee
Q 019438 74 KEKDASQNRLVLADPPDCCSKPK-NKLTGEAILVHRGGCS---------FTAK----ANFAEEANASAILIINNKTELFK 139 (341)
Q Consensus 74 ~~~~~~~~~Lv~~~p~~aC~~~~-~~l~g~IaLV~RG~Cs---------F~~K----a~nAq~aGA~avLI~n~~~~l~~ 139 (341)
++..+++++|+.+.....|.... .+++||||||.||.|. |..| +.+|+++||+|+||+|+......
T Consensus 101 tp~~~vta~lV~v~~~~~~~~~~~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~ 180 (444)
T 3iib_A 101 TPAQGLSATIVRFDTLQDLQNAEAGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDR 180 (444)
T ss_dssp CCTTCEEEEEEEESSHHHHHTSCTTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSS
T ss_pred CCCCCeEEEEEecCCHHHHhhccccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCcccc
Confidence 34457889999887655665443 5899999999999995 6777 45799999999999997543222
Q ss_pred eccCC--CCCCCCccceEEEechhhHHHHHHHHHCCCEEEEEEe
Q 019438 140 MVCES--NETDVDIRIPAIMLPQDAGANLEKLIKNNSVVSVQLY 181 (341)
Q Consensus 140 m~~~~--~~~~~~i~IPvv~Is~~~G~~L~~~l~~G~~V~V~l~ 181 (341)
+.+++ ........||++.|++++|+.|+++++.|.++++++.
T Consensus 181 ~~~tg~~~~~~~~~~IP~~~Is~~da~~L~~~l~~g~~~~v~l~ 224 (444)
T 3iib_A 181 MAHTGMMRYEEGVTAIPAAAISNPDADLINAMLKRDKEVVISLE 224 (444)
T ss_dssp CCCCCBCCCCTTSCCCCEEEECHHHHHHHHHHHTTTCCCEEEEE
T ss_pred cccCCccccCCCCCCCCeEEecHHHHHHHHHHHhCCCCeEEEEE
Confidence 22211 1111246899999999999999999988876666655
No 3
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=99.01 E-value=3.4e-09 Score=104.91 Aligned_cols=89 Identities=21% Similarity=0.277 Sum_probs=67.2
Q ss_pred ceeEEEEecCCCCCCCCCC-CCCCCcEEEEecCCCCHHHHHHHHHHcCCcEEEEEeCCCCceeeccCCCCCCCCccceEE
Q 019438 78 ASQNRLVLADPPDCCSKPK-NKLTGEAILVHRGGCSFTAKANFAEEANASAILIINNKTELFKMVCESNETDVDIRIPAI 156 (341)
Q Consensus 78 ~~~~~Lv~~~p~~aC~~~~-~~l~g~IaLV~RG~CsF~~Ka~nAq~aGA~avLI~n~~~~l~~m~~~~~~~~~~i~IPvv 156 (341)
...++|+..... ..+..+ .+++||||||+||+|+|.+|+++|+++||+|+||||+.+..+.. ..+. .....||++
T Consensus 92 ~v~a~lv~~~~G-~~~D~~~~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g--~~~~-~~~~~IP~~ 167 (421)
T 2ek8_A 92 DVTAELVYVGLG-TTADVAGKDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNG--TLGG-SDASFVAAV 167 (421)
T ss_dssp EEEEEEEECTTC-CTTTTTTSCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCC--BCSS-CCTTCCEEE
T ss_pred CcceEEEECCCC-ChhhcCCCCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCccccc--ccCC-CCCCCccEE
Confidence 466788776422 222223 37999999999999999999999999999999999986432211 1111 134689999
Q ss_pred EechhhHHHHHHHH
Q 019438 157 MLPQDAGANLEKLI 170 (341)
Q Consensus 157 ~Is~~~G~~L~~~l 170 (341)
.|++++++.|++.+
T Consensus 168 ~Is~~~a~~L~~~l 181 (421)
T 2ek8_A 168 GITKQEGDALAANL 181 (421)
T ss_dssp EECHHHHHHHHHHH
T ss_pred EeCHHHHHHHHHHh
Confidence 99999999999988
No 4
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=98.62 E-value=7.2e-08 Score=101.64 Aligned_cols=94 Identities=16% Similarity=0.153 Sum_probs=67.4
Q ss_pred CCceeEEEEecCCCCCCCCC--------CCCCCCcEEEEecCCCCHHHHHHHHHHcCCcEEEEEeCCCC-------ce--
Q 019438 76 KDASQNRLVLADPPDCCSKP--------KNKLTGEAILVHRGGCSFTAKANFAEEANASAILIINNKTE-------LF-- 138 (341)
Q Consensus 76 ~~~~~~~Lv~~~p~~aC~~~--------~~~l~g~IaLV~RG~CsF~~Ka~nAq~aGA~avLI~n~~~~-------l~-- 138 (341)
....+++|+.+. .||... ..+++||||||+||+|+|.+|+++||++||+|+||||+..+ .+
T Consensus 124 ~G~v~g~lV~v~--~G~~~Df~~L~~~~~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~ 201 (707)
T 3fed_A 124 QGMPEGDLVYVN--YARTEDFFKLEREMGINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPK 201 (707)
T ss_dssp CBCCEECEEECT--TCCHHHHHHHHHTSCCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTT
T ss_pred CCceEEEEEEec--CCchhhHHHHHhccCCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCC
Confidence 335678898874 566221 23699999999999999999999999999999999996210 00
Q ss_pred ---------------eeccCCC-CC-----------------CCCccceEEEechhhHHHHHHHHH
Q 019438 139 ---------------KMVCESN-ET-----------------DVDIRIPAIMLPQDAGANLEKLIK 171 (341)
Q Consensus 139 ---------------~m~~~~~-~~-----------------~~~i~IPvv~Is~~~G~~L~~~l~ 171 (341)
.+.+.++ .+ ....+||++-|++.+|+.|++.+.
T Consensus 202 ~~~~p~~~vqrGsv~~~~~~GDp~TPG~ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~ 267 (707)
T 3fed_A 202 GWNLPGTAAQRGNVLNLNGAGDPLTPGYPAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLG 267 (707)
T ss_dssp SSBCCTTCCCCCCCCCCTTCCSTTCTTSCCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBC
T ss_pred CccCCCccccccceecccCCCCCCCCCCcccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhc
Confidence 0000000 00 013589999999999999998875
No 5
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=98.47 E-value=2.2e-07 Score=96.96 Aligned_cols=92 Identities=22% Similarity=0.296 Sum_probs=65.4
Q ss_pred ceeEEEEecCCCCCCCCC-C---CCCCCcEEEEecCCCCHHHHHHHHHHcCCcEEEEEeCCCCc-e-e----ecc-----
Q 019438 78 ASQNRLVLADPPDCCSKP-K---NKLTGEAILVHRGGCSFTAKANFAEEANASAILIINNKTEL-F-K----MVC----- 142 (341)
Q Consensus 78 ~~~~~Lv~~~p~~aC~~~-~---~~l~g~IaLV~RG~CsF~~Ka~nAq~aGA~avLI~n~~~~l-~-~----m~~----- 142 (341)
...++|+.+. .||... + .+++||||||+||+|+|.+|+++|+++||+|+||||+..+. . . ..+
T Consensus 107 ~v~g~lV~vg--~G~~~D~~~l~vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~ 184 (640)
T 3kas_A 107 TVTGKLVHAN--FGTKKDFEDLYTPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLG 184 (640)
T ss_dssp EEEECEEECT--TCCHHHHHTCSSCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSS
T ss_pred ceEEEEEEec--CCChhhHHHhhcccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccC
Confidence 4567888873 455221 1 27999999999999999999999999999999999975321 0 0 000
Q ss_pred CCC--C---------------CCCCccceEEEechhhHHHHHHHHH
Q 019438 143 ESN--E---------------TDVDIRIPAIMLPQDAGANLEKLIK 171 (341)
Q Consensus 143 ~~~--~---------------~~~~i~IPvv~Is~~~G~~L~~~l~ 171 (341)
.++ . ......||++.|++++++.|++.+.
T Consensus 185 ~Gdp~tpg~ps~~~~~~~~~~~~~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 185 TGDPYTPGFPSFNHTQFPPSRSSGLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp SSCSCCCSSCC---CCCCCCSSCCCCSSCEEECCHHHHHHHHTTEE
T ss_pred CCCCCCCCcccccccccccccccCCCCCCEEecCHHHHHHHHHHcc
Confidence 000 0 0113479999999999999988754
No 6
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=98.45 E-value=3e-07 Score=96.15 Aligned_cols=93 Identities=11% Similarity=0.196 Sum_probs=75.5
Q ss_pred eeEEEEecCCCCCCCCCC---C--CCCCcEEEEecCCCCHHHHHHHHHHcCCcEEEEEeCCCCceeeccCCCCCCCCccc
Q 019438 79 SQNRLVLADPPDCCSKPK---N--KLTGEAILVHRGGCSFTAKANFAEEANASAILIINNKTELFKMVCESNETDVDIRI 153 (341)
Q Consensus 79 ~~~~Lv~~~p~~aC~~~~---~--~l~g~IaLV~RG~CsF~~Ka~nAq~aGA~avLI~n~~~~l~~m~~~~~~~~~~i~I 153 (341)
...+|+.......|.+.. . +++|||+|++||.|+|.+|..+++++||.++|++|+.+.+. .....+
T Consensus 257 ~~~plv~~~~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~---------~~~~~~ 327 (649)
T 3i6s_A 257 RDSPVIYNKTLSDCSSEELLSQVENPENTIVICDDNGDFSDQMRIITRARLKAAIFISEDPGVFR---------SATFPN 327 (649)
T ss_dssp EEEEEECCTTTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHHHHHHHTCSEEEEECCCGGGGG---------CCCCCS
T ss_pred cceeeEecccccccccccccccccccCCcEEEEeCCCccHHHHHHHHHhcCceEEEEecCccccc---------cccCcC
Confidence 457888887788998753 3 34999999999999999999999999999999999862221 123479
Q ss_pred eEEEechhhHHHHHHHHHCCCEEEEEE
Q 019438 154 PAIMLPQDAGANLEKLIKNNSVVSVQL 180 (341)
Q Consensus 154 Pvv~Is~~~G~~L~~~l~~G~~V~V~l 180 (341)
|+++|++++|+.|++++..++..++++
T Consensus 328 P~~~v~~~~g~~i~~yi~s~~~~~a~i 354 (649)
T 3i6s_A 328 PGVVVNKKEGKQVINYVKNSVTPTATI 354 (649)
T ss_dssp CEEEECHHHHHHHHHHHHTCSSCEEEE
T ss_pred CEEEEcHHHHHHHHHHHhcCCCceEEE
Confidence 999999999999999999876544443
No 7
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=98.34 E-value=1.1e-06 Score=87.46 Aligned_cols=116 Identities=19% Similarity=0.248 Sum_probs=81.9
Q ss_pred CCCCCCC-----CCCCCcEEEEecCCC-----CHHHHHHHHHHcCCcEEEEEeCCCC--c---eeeccCCCCCCCCccce
Q 019438 90 DCCSKPK-----NKLTGEAILVHRGGC-----SFTAKANFAEEANASAILIINNKTE--L---FKMVCESNETDVDIRIP 154 (341)
Q Consensus 90 ~aC~~~~-----~~l~g~IaLV~RG~C-----sF~~Ka~nAq~aGA~avLI~n~~~~--l---~~m~~~~~~~~~~i~IP 154 (341)
..|.+.+ .+++|||+|++||.| .|.+|+++++++||.++|+||+.+. . +.+. ......||
T Consensus 258 ~~C~~~~~~~~~~~~~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~-----~~~~~~~p 332 (441)
T 1y9z_A 258 AECTVNGTSFSCGNMANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVD-----ANSDITVP 332 (441)
T ss_dssp EEEEEETTEEECCCCTTEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEEC-----TTCCCCSC
T ss_pred hccccccccccCCCccccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccc-----cccCcccc
Confidence 4576542 479999999999987 8999999999999999999998542 1 1111 12345899
Q ss_pred EEEechhhHHHHHHHHHCCCEEEEEEecCCCCCccceeehhHHHHHHHh--hheeeeccchhhh
Q 019438 155 AIMLPQDAGANLEKLIKNNSVVSVQLYSPRRPVVDVAEVFLWLMAVGTI--LCASYWSAWTARE 216 (341)
Q Consensus 155 vv~Is~~~G~~L~~~l~~G~~V~V~l~sp~~p~~D~s~v~i~lmAv~Tv--~~~~~WS~~~~r~ 216 (341)
+++|++++|+.|++.+ +..+++.... .-.|...--..||...| +++..|+.+....
T Consensus 333 ~~~v~~~~g~~l~~~~--~~~~t~~~~~----~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~s 390 (441)
T 1y9z_A 333 SVSVDRATGLALKAKL--GQSTTVSNQG----NQDYEYYNGTSMATPHVSGVATLVWSYHPECS 390 (441)
T ss_dssp EEEECHHHHHHHHTTT--TSEEEEEEEE----EESEEEECSHHHHHHHHHHHHHHHHHHCTTSC
T ss_pred EEEEeHHHHHHHHHHh--cCCccccccc----CCCceeecccccCCcccchHHHHHHHHCCCCC
Confidence 9999999999999876 6667665431 12344444556777777 4555666655433
No 8
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=98.19 E-value=6.8e-06 Score=89.05 Aligned_cols=90 Identities=21% Similarity=0.335 Sum_probs=67.9
Q ss_pred eEEEEecCCCCCCCCCC-CCCCCcEEEEecCCCCHHHHHHHHHHcCCcEEEEEeCCCCceeeccCCCCCCCCccceEEEe
Q 019438 80 QNRLVLADPPDCCSKPK-NKLTGEAILVHRGGCSFTAKANFAEEANASAILIINNKTELFKMVCESNETDVDIRIPAIML 158 (341)
Q Consensus 80 ~~~Lv~~~p~~aC~~~~-~~l~g~IaLV~RG~CsF~~Ka~nAq~aGA~avLI~n~~~~l~~m~~~~~~~~~~i~IPvv~I 158 (341)
..+++... ++|.+.. .+++|||+|++||.|+|.+|+.+++++||.++|++|+..+...+... ....||+++|
T Consensus 261 ~~~lv~~~--~g~~~~~~~~v~Gkivl~~rg~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~-----~~~~iP~~~i 333 (926)
T 1xf1_A 261 AYDYAYAN--RGTKEDDFKDVKGKIALIERGDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIELP-----NVDQMPAAFI 333 (926)
T ss_dssp CEEEEECT--TSCSTTTTTTCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEECC-----CSTTCCEEEE
T ss_pred eEEEEECC--CCCCccchhhcCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEEecCCCCcccccC-----ccccccEEEE
Confidence 46777654 5686543 58999999999999999999999999999999999986442222111 2347999999
Q ss_pred chhhHHHHHHHHHCCCEEEEEE
Q 019438 159 PQDAGANLEKLIKNNSVVSVQL 180 (341)
Q Consensus 159 s~~~G~~L~~~l~~G~~V~V~l 180 (341)
++++|+.|+. +...++++
T Consensus 334 ~~~~g~~l~~----~~~~ti~~ 351 (926)
T 1xf1_A 334 SRKDGLLLKD----NPQKTITF 351 (926)
T ss_dssp CHHHHHHHHH----CSSCEEEE
T ss_pred eHHHHHHHHh----CCceEEEe
Confidence 9999998874 44444443
No 9
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=92.37 E-value=0.16 Score=52.44 Aligned_cols=71 Identities=17% Similarity=0.295 Sum_probs=55.0
Q ss_pred CCCCCCC---CCCCCcEEEEecCCCCHHHHHHHHHHcCCcEEEEEeCCCCceeeccCCCCCCCCccceEEEechhhHHHH
Q 019438 90 DCCSKPK---NKLTGEAILVHRGGCSFTAKANFAEEANASAILIINNKTELFKMVCESNETDVDIRIPAIMLPQDAGANL 166 (341)
Q Consensus 90 ~aC~~~~---~~l~g~IaLV~RG~CsF~~Ka~nAq~aGA~avLI~n~~~~l~~m~~~~~~~~~~i~IPvv~Is~~~G~~L 166 (341)
..|.+.. ..++|||++++|+ +..|..+++.+||.++|++|+..+. .....+|.+.++..+|..+
T Consensus 268 ~~~~~~~~~~~~v~gkivl~~~~---~~~~~~~~~~~Ga~gvi~~~~~~~~----------~~~~~lP~~~v~~~~g~~i 334 (621)
T 3vta_A 268 RFCTDKSVNPNLLKGKIVVCEAS---FGPHEFFKSLDGAAGVLMTSNTRDY----------ADSYPLPSSVLDPNDLLAT 334 (621)
T ss_dssp TTTCTTCSCGGGTTTSEEECSSC---CCHHHHHHHHTTCSEEEEECSCCSS----------CCCCSSSEEEECHHHHHHH
T ss_pred ccccccccccccccceEEEEecC---CChhHHhhhhcceeEEEEEecCCCc----------ccccccceEEECHHHHHHH
Confidence 4565543 3689999998764 6689999999999999999985432 1234789999999999999
Q ss_pred HHHHHCC
Q 019438 167 EKLIKNN 173 (341)
Q Consensus 167 ~~~l~~G 173 (341)
+..+...
T Consensus 335 ~~~~~~~ 341 (621)
T 3vta_A 335 LRYIYSI 341 (621)
T ss_dssp HHHHHHH
T ss_pred HHHHhcc
Confidence 9887643
No 10
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=17.75 E-value=2.3e+02 Score=22.03 Aligned_cols=67 Identities=10% Similarity=0.208 Sum_probs=39.6
Q ss_pred CCcEEEEecC-----CCCHHHHHHHHH-HcCCcE--EEEEeCCCC------ceeeccCCCCCCCCccceEEEechh---h
Q 019438 100 TGEAILVHRG-----GCSFTAKANFAE-EANASA--ILIINNKTE------LFKMVCESNETDVDIRIPAIMLPQD---A 162 (341)
Q Consensus 100 ~g~IaLV~RG-----~CsF~~Ka~nAq-~aGA~a--vLI~n~~~~------l~~m~~~~~~~~~~i~IPvv~Is~~---~ 162 (341)
+++|+|..++ .|.|-.|++..- +.|... .-.+|-.++ +.... ...++|.++|... .
T Consensus 15 ~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~~~~dv~~~~~~~~~l~~~s-------g~~tvP~vfI~g~~iGG 87 (121)
T 3gx8_A 15 SAPVVLFMKGTPEFPKCGFSRATIGLLGNQGVDPAKFAAYNVLEDPELREGIKEFS-------EWPTIPQLYVNKEFIGG 87 (121)
T ss_dssp SCSEEEEESBCSSSBCTTHHHHHHHHHHHHTBCGGGEEEEECTTCHHHHHHHHHHH-------TCCSSCEEEETTEEEES
T ss_pred cCCEEEEEeccCCCCCCccHHHHHHHHHHcCCCcceEEEEEecCCHHHHHHHHHHh-------CCCCCCeEEECCEEEec
Confidence 4689999998 899999999765 456541 334443221 11111 1237899998775 2
Q ss_pred HHHHHHHHHCC
Q 019438 163 GANLEKLIKNN 173 (341)
Q Consensus 163 G~~L~~~l~~G 173 (341)
.+.+.++.++|
T Consensus 88 ~d~l~~l~~~G 98 (121)
T 3gx8_A 88 CDVITSMARSG 98 (121)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHcC
Confidence 24444444433
Done!