BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019441
(341 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255586057|ref|XP_002533695.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223526406|gb|EEF28690.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 478
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/343 (66%), Positives = 259/343 (75%), Gaps = 32/343 (9%)
Query: 1 MEMNGSKREENEKMEEC-KETVVYMWGYLPGTSPEKSPILSPIPARLCGG---DSWKDVC 56
M +NG+ EE+ KMEEC K T VYM GYLPG SPEKSPILSPI + G DSWKDVC
Sbjct: 1 MAINGNGEEEDVKMEECCKVTAVYMCGYLPGISPEKSPILSPIQVPISDGGGFDSWKDVC 60
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GGCGFA+A S SG LITWGS D+EGQSYLTSGKHGE PEPFPLP EASVVKAAAGWAHC
Sbjct: 61 SGGCGFAMAISGSGNLITWGSTDEEGQSYLTSGKHGEIPEPFPLPCEASVVKAAAGWAHC 120
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS-------- 168
VSVTE GEV+TWGW+ECVPS K+ Q+D+TGKQ+AL + S
Sbjct: 121 VSVTETGEVFTWGWKECVPSVKI---------IQRDNTGKQNALLQTEKVSSRSEGSSLT 171
Query: 169 --------DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
KR G+E+VKRR+ S +E+ E+ SGDEFFT+ P +VTL PGV+IT VAAG
Sbjct: 172 RGTVLNSDSKRTGDEIVKRRRVSPTKEDFESSPSGDEFFTVLPLMVTLAPGVRITNVAAG 231
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
GRHTL LSDMGQVWGWGYGGEGQLGLGSRIKMV +PHLIPC++ +ASGKDR L+V QG++
Sbjct: 232 GRHTLALSDMGQVWGWGYGGEGQLGLGSRIKMVSSPHLIPCIDASASGKDRSLIVHQGNL 291
Query: 281 NSSGKAGR---SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
S +A SYVKEIACGGRHSA+VTD GALLTFGWGLYGQ
Sbjct: 292 TPSAQASTFPGSYVKEIACGGRHSAIVTDTGALLTFGWGLYGQ 334
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 97/242 (40%), Gaps = 55/242 (22%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
+ AAG H +++++ G+V+ WG +G G S K + P
Sbjct: 225 ITNVAAGGRHTLALSDMGQVWGWG-------------YGGEGQLGLGSRIKMVSSP-HLI 270
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
P D A + ++ + + P++ F PG + ++A GGRH+
Sbjct: 271 PCIDASAS----GKDRSLIVHQGNLTPSAQASTF----------PGSYVKEIACGGRHSA 316
Query: 226 ILSDMGQVWGWGYGGEGQLGLGS-----RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
I++D G + +G+G GQ G G+ R VP I + AA + G V
Sbjct: 317 IVTDTGALLTFGWGLYGQCGQGTTNDQLRPACVPALSGIKVISIAAGLWHTVCISADGHV 376
Query: 281 NSSG----------------------KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ G G + K ++CG RHSAV+T+ G + ++GW Y
Sbjct: 377 YTFGGNQFGQLGTDTDQTEPKQLYAPSLGSKHAKIVSCGARHSAVLTEDGQVYSWGWNKY 436
Query: 319 GQ 320
GQ
Sbjct: 437 GQ 438
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 78/206 (37%), Gaps = 63/206 (30%)
Query: 53 KDVCGGGCGFALATSESGKLIT--WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K++ GG A+ T ++G L+T WG GQ P P + V+ A
Sbjct: 306 KEIACGGRHSAIVT-DTGALLTFGWGLYGQCGQGTTNDQLR---PACVPALSGIKVISIA 361
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
AG H V ++ G VYT+G + FG G+ T+Q P
Sbjct: 362 AGLWHTVCISADGHVYTFGGNQ----------FGQLGT------------DTDQTEPKQL 399
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
A P+ G + + C G RH+ +L++
Sbjct: 400 YA-------------------PSLGSKHAKIVSC---------------GARHSAVLTED 425
Query: 231 GQVWGWGYGGEGQLGLGSRI-KMVPT 255
GQV+ WG+ GQLGLG I + +P+
Sbjct: 426 GQVYSWGWNKYGQLGLGDSIDRNIPS 451
>gi|449448608|ref|XP_004142058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
sativus]
Length = 485
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/337 (62%), Positives = 241/337 (71%), Gaps = 17/337 (5%)
Query: 1 MEMNGSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVC 56
M+ + KM + +VYMWGYLPG P+KS +L P P RL GGDSWK+VC
Sbjct: 1 MKEENAADHNGAKMANKIDALVYMWGYLPGALPDKSLLLLPEPVRLPSSIDGGDSWKEVC 60
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GGGCGFA+A S+SGKLITWG+AD+EGQ +LTSGKHGE PE FP PTE VVKA AGWAHC
Sbjct: 61 GGGCGFAMAISDSGKLITWGAADEEGQIFLTSGKHGEIPEAFPFPTEDLVVKAVAGWAHC 120
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD------- 169
VSVTEAGEVYTWGW EC+PS K RD G KDSTGKQS EQA P D
Sbjct: 121 VSVTEAGEVYTWGWSECIPSMKTLRDLAIGGGLLKDSTGKQSLTTAEQAGPQDSNGVDRM 180
Query: 170 ------KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
KR GEE KRRK +S +E++E + GD+ FT PCLV PGVKI VAAGGRH
Sbjct: 181 DSQLDNKRVGEETAKRRKINSVKEDTEISSPGDDLFTTLPCLVNFGPGVKIAAVAAGGRH 240
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
TL LSDMGQVWGWG+GGEGQLGLG+R+KMV +PH+IPC+E AS KDR ++ Q S ++
Sbjct: 241 TLALSDMGQVWGWGHGGEGQLGLGTRVKMVSSPHIIPCIELPASAKDRSSVIYQASKAAA 300
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
GK +YVK IACGGRHS VVTD GALLTFGWGLYGQ
Sbjct: 301 GKVLGNYVKGIACGGRHSVVVTDTGALLTFGWGLYGQ 337
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 23/126 (18%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G+ L P V+ ++ ++AG HT+ ++ G V+ +G GQLG G+ +
Sbjct: 341 GNTNDLLRPTCVSSLSSTQVESISAGLWHTVCITAEGLVYAFGGNQFGQLGTGTD-QGET 399
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
P L+ D P+L GK K ++CG RH+ V+TD G L ++G
Sbjct: 400 IPRLL----------DAPIL--------EGKC----AKRVSCGARHNVVLTDDGQLFSWG 437
Query: 315 WGLYGQ 320
W YGQ
Sbjct: 438 WNKYGQ 443
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPT 255
+V+ G RH ++L+D GQ++ WG+ GQLGLG I + +P+
Sbjct: 416 RVSCGARHNVVLTDDGQLFSWGWNKYGQLGLGDSIDRNIPS 456
>gi|449519078|ref|XP_004166562.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
sativus]
Length = 472
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/324 (64%), Positives = 237/324 (73%), Gaps = 17/324 (5%)
Query: 14 MEECKETVVYMWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVCGGGCGFALATSES 69
M + +VYMWGYLPG P+KS +L P P RL GGDSWK+VCGGGCGFA+A S+S
Sbjct: 1 MANKIDALVYMWGYLPGALPDKSLLLLPEPVRLPSSIDGGDSWKEVCGGGCGFAMAISDS 60
Query: 70 GKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
GKLITWG+AD+EGQ +LTSGKHGE PE FP PTE VVKA AGWAHCVSVTEAGEVYTWG
Sbjct: 61 GKLITWGAADEEGQIFLTSGKHGEIPEAFPFPTEDLVVKAVAGWAHCVSVTEAGEVYTWG 120
Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD-------------KRAGEEV 176
W EC+PS K RD G KDSTGKQS EQA P D KR GEE
Sbjct: 121 WSECIPSMKTLRDLAIGGGLLKDSTGKQSLTTAEQAGPQDSNGVDRMDSQLDNKRVGEET 180
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
KRRK +S +E++E + GD+ FT PCLV PGVKI VAAGGRHTL LSDMGQVWGW
Sbjct: 181 AKRRKINSVKEDTEISSPGDDLFTTLPCLVNFGPGVKIAAVAAGGRHTLALSDMGQVWGW 240
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G+GGEGQLGLG+R+KMV +PH+IPC+E AS KDR ++ Q S ++GK +YVK IAC
Sbjct: 241 GHGGEGQLGLGTRVKMVSSPHIIPCIELPASAKDRSSVIYQASKAAAGKVLGNYVKGIAC 300
Query: 297 GGRHSAVVTDAGALLTFGWGLYGQ 320
GGRHS VVTD GALLTFGWGLYGQ
Sbjct: 301 GGRHSVVVTDTGALLTFGWGLYGQ 324
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 23/126 (18%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G+ L P V+ ++ ++AG HT+ ++ G V+ +G GQLG G+ +
Sbjct: 328 GNTNDLLRPTCVSSLSSTQVESISAGLWHTVCITAEGLVYAFGGNQFGQLGTGTD-QGET 386
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
P L+ D P+L GK K ++CG RH+ V+TD G L ++G
Sbjct: 387 IPRLL----------DAPIL--------EGKC----AKRVSCGARHNVVLTDDGQLFSWG 424
Query: 315 WGLYGQ 320
W YGQ
Sbjct: 425 WNKYGQ 430
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPT 255
+V+ G RH ++L+D GQ++ WG+ GQLGLG I + +P+
Sbjct: 403 RVSCGARHNVVLTDDGQLFSWGWNKYGQLGLGDSIDRNIPS 443
>gi|356523185|ref|XP_003530222.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Glycine max]
Length = 528
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/328 (65%), Positives = 243/328 (74%), Gaps = 28/328 (8%)
Query: 17 CKETVVYMWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVCGGGCGFALATSESGKL 72
C E +VYMWGYLPG SPEKSPILSP P L GDSWKDVCGGGCGFA+A SE GKL
Sbjct: 59 CAEKMVYMWGYLPGASPEKSPILSPAPVNLSDRSLAGDSWKDVCGGGCGFAMAISEKGKL 118
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
ITWGSADDEGQSYL SGKHGE P + LPTEASVVKAAAGWAHC SV E GEVY WGW+E
Sbjct: 119 ITWGSADDEGQSYLISGKHGEIPGLYQLPTEASVVKAAAGWAHCASVNEEGEVYAWGWKE 178
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSAL----------------PTEQAPPSDKRAGEEV 176
CVPS KV DF + GSFQKD GKQ + + +K+ G+EV
Sbjct: 179 CVPSGKVITDFITVGSFQKDVAGKQRSXWNFRHXTGSPQSSNTSSGSDSHHDNKKVGDEV 238
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+KRRK + +R++S++ ASGDEFFT+SP LVTL GVKIT VA GGRHTL LSD+GQVWGW
Sbjct: 239 LKRRKITFSRQDSDSQASGDEFFTVSPSLVTLASGVKITSVAVGGRHTLALSDVGQVWGW 298
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR----SYVK 292
GYGGEGQLGLGSR+KMV +PHLIPC+E +SGKD+ QGS +G G SYV
Sbjct: 299 GYGGEGQLGLGSRVKMVSSPHLIPCIE--SSGKDKSSAFHQGS--GAGAQGSNVTGSYVM 354
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+IACGGRHS V+TDAGALLTFGWGLYGQ
Sbjct: 355 DIACGGRHSVVITDAGALLTFGWGLYGQ 382
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 105/257 (40%), Gaps = 62/257 (24%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
+P L + + A G H +++++ G+V+ WG +G G S
Sbjct: 264 SPSLVTLASGVKITSVAVGGRHTLALSDVGQVWGWG-------------YGGEGQLGLGS 310
Query: 154 TGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK 213
K + P P + +G++ K+S+ + S A G G
Sbjct: 311 RVKMVSSP--HLIPCIESSGKD-----KSSAFHQGSGAGAQGSNV-----------TGSY 352
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASG 268
+ +A GGRH+++++D G + +G+G GQ G G+ + P L+P L E A+G
Sbjct: 353 VMDIACGGRHSVVITDAGALLTFGWGLYGQCGQGNNADQL-RPTLVPSLLGTRVEKIAAG 411
Query: 269 KDRPLLVR-QGSV-----NSSGKAG-------------------RSYVKEIACGGRHSAV 303
L V G + N G+ G + ++CG RHSA+
Sbjct: 412 LWHTLCVSVNGQIYAFGGNQFGQLGTGSDQPETSPRQLDASRFENKHSSIVSCGARHSAL 471
Query: 304 VTDAGALLTFGWGLYGQ 320
+TD G L T+GW YGQ
Sbjct: 472 LTDDGHLFTWGWNKYGQ 488
>gi|356566559|ref|XP_003551498.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 525
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/323 (66%), Positives = 242/323 (74%), Gaps = 25/323 (7%)
Query: 19 ETVVYMWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVCGGGCGFALATSESGKLIT 74
E +VYMWGYLPG SPEKSPILSP P L DSWKDVCGGGCGFA+ SE GKLIT
Sbjct: 61 EKMVYMWGYLPGASPEKSPILSPAPVTLSDPSLAVDSWKDVCGGGCGFAMVISEKGKLIT 120
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
WGSADDEGQSYL SGKHGE P + LPTEASVVKAAAGWAHC SVTE GEVY WGW+ECV
Sbjct: 121 WGSADDEGQSYLISGKHGEIPGLYQLPTEASVVKAAAGWAHCASVTEEGEVYAWGWKECV 180
Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP-------------SDKRAGEEVVKRRK 181
PS KV DF + GS QKD GKQS+ EQ P +K+ G+EVVKRRK
Sbjct: 181 PSGKVITDFITVGSLQKDIAGKQSSSIAEQGSPQSSNTSSGSDSHHDNKKVGDEVVKRRK 240
Query: 182 TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
+ +R++S++ ASGDEFFT+SP LVTL GVKIT V+ GGRHTL LSD+GQVWGWGYGGE
Sbjct: 241 ITFSRQDSDSQASGDEFFTVSPSLVTLGNGVKITSVSLGGRHTLALSDVGQVWGWGYGGE 300
Query: 242 GQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR----SYVKEIACG 297
GQLGLGSR+KMV +PHLIPC+E A GKD+ QGS +G G SYV +I+CG
Sbjct: 301 GQLGLGSRVKMVSSPHLIPCIESA--GKDKSSAFHQGS--GAGAQGSNVTGSYVMDISCG 356
Query: 298 GRHSAVVTDAGALLTFGWGLYGQ 320
GRHS V+TDAGALLTFGWGLYGQ
Sbjct: 357 GRHSVVITDAGALLTFGWGLYGQ 379
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 105/257 (40%), Gaps = 62/257 (24%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
+P L + + G H +++++ G+V+ WG +G G S
Sbjct: 261 SPSLVTLGNGVKITSVSLGGRHTLALSDVGQVWGWG-------------YGGEGQLGLGS 307
Query: 154 TGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK 213
K + P P + AG++ K+S+ + S A G G
Sbjct: 308 RVKMVSSP--HLIPCIESAGKD-----KSSAFHQGSGAGAQGSNV-----------TGSY 349
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASG 268
+ ++ GGRH+++++D G + +G+G GQ G G+ + + P L+P L E A+G
Sbjct: 350 VMDISCGGRHSVVITDAGALLTFGWGLYGQCGQGNNVDQL-RPTLVPSLLGTRVEKIAAG 408
Query: 269 KDRPLLVR-QGSV-----NSSGKAG-------------------RSYVKEIACGGRHSAV 303
L V G + N G+ G + ++CG RHSA+
Sbjct: 409 LWHTLCVTVNGQIYAFGGNQFGQLGTGTDQPETSPRQLDASRFENKHSSIVSCGARHSAL 468
Query: 304 VTDAGALLTFGWGLYGQ 320
+TD G L T+GW YGQ
Sbjct: 469 LTDDGHLFTWGWNKYGQ 485
>gi|359482088|ref|XP_002271900.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like isoform
1 [Vitis vinifera]
Length = 514
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/343 (64%), Positives = 257/343 (74%), Gaps = 28/343 (8%)
Query: 2 EMNGSKRE-ENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVC 56
+ +GS+ E E KMEE +VVYMWGYLPG S + SP+LSP+P L DSWKDVC
Sbjct: 17 DCDGSEGEGEAMKMEE---SVVYMWGYLPGASLQGSPLLSPVPVALPTSTLSEDSWKDVC 73
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GGGCGFA+A SESGKLITWGS DD GQSYLTSG+HGETPEPFPLPTEA +VKAAAGWAHC
Sbjct: 74 GGGCGFAVAISESGKLITWGSEDDLGQSYLTSGQHGETPEPFPLPTEAPIVKAAAGWAHC 133
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP--------- 167
VS+T+ GE YTWGW+ECVPS KV D + F+KDS GKQS L TEQ P
Sbjct: 134 VSLTDKGEAYTWGWKECVPSGKVLLD-STGVRFEKDSFGKQSLLQTEQEGPKPQSSNSTG 192
Query: 168 ------SDKRAGEEVVKRRKTSSAREESENPA-SGDEFFTLSPCLVTLNPGVKITKVAAG 220
+++A E +K+R+TSSA++E E+ + S DE F SPCLVTL PGV+I+ +AAG
Sbjct: 193 GMLSRVDNRKAREGSIKKRRTSSAKQEPESSSMSDDETFLASPCLVTLGPGVRISTIAAG 252
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
GRHTL LSDMGQVWGWGYGGEGQLGLGSR K+V +PHLIPC +A GKDRP LV QGS+
Sbjct: 253 GRHTLALSDMGQVWGWGYGGEGQLGLGSRTKLVSSPHLIPCFNPSAYGKDRPSLVHQGSL 312
Query: 281 NSS---GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+S+ K S VK IACGGRHSAV+TDAG LLTFGWGL+GQ
Sbjct: 313 SSTEDISKVPGSRVKGIACGGRHSAVITDAGQLLTFGWGLHGQ 355
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 23/126 (18%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G+ L P V+ GVK+ +AAG HTL S GQV+ +G GQLG G+
Sbjct: 359 GNTHDQLRPACVSALSGVKVAGIAAGLWHTLCFSAEGQVYAFGGNQFGQLGTGAD----- 413
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
+P L A++ +++ K ++CG RHS V+T+ G + ++G
Sbjct: 414 QAETLPKLLDASNLENK------------------RAKIVSCGARHSVVLTEGGEIFSWG 455
Query: 315 WGLYGQ 320
W YGQ
Sbjct: 456 WNKYGQ 461
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 196 DEFFTLSPCLVTLNPGVKITK-VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMV 253
D+ TL L N K K V+ G RH+++L++ G+++ WG+ GQLGLG I + +
Sbjct: 413 DQAETLPKLLDASNLENKRAKIVSCGARHSVVLTEGGEIFSWGWNKYGQLGLGDCIDRNI 472
Query: 254 PTP 256
P+P
Sbjct: 473 PSP 475
>gi|255566472|ref|XP_002524221.1| Serine/threonine-protein kinase Nek8, putative [Ricinus communis]
gi|223536498|gb|EEF38145.1| Serine/threonine-protein kinase Nek8, putative [Ricinus communis]
Length = 476
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/332 (62%), Positives = 248/332 (74%), Gaps = 16/332 (4%)
Query: 3 MNGSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
MNG +E + E KE +V+MWGYLPG P++SPILSP+ R G SWKDVCGGGCGF
Sbjct: 1 MNGEGKEVMKMEEMVKEKLVFMWGYLPGALPQRSPILSPVVVR-ADGYSWKDVCGGGCGF 59
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
A+A SESGKLITWGS DD GQSY+TSGKHGE PEPFPLPTEAS++KAAAGWAHC++ T+
Sbjct: 60 AMAISESGKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIMKAAAGWAHCIAATDT 119
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR----------- 171
GEVYTWGW+EC+PS KV D AG +KD + S TEQ P +
Sbjct: 120 GEVYTWGWKECIPSGKVFGDPSVAGGTEKDVFERHSPFLTEQVSPRSQSSRSTGGIDGRG 179
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+G+E KRR+ SSA++ +E+ +SGDE + PCLVTLNPGV+IT VAAGGRHTL LSD+G
Sbjct: 180 SGDESTKRRRISSAKQSAESSSSGDETLSALPCLVTLNPGVRITTVAAGGRHTLALSDIG 239
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR--- 288
QVWGWGYGGEGQLGLGSRI+MV +PH +PC++ + GKDRP +G + S G R
Sbjct: 240 QVWGWGYGGEGQLGLGSRIRMVSSPHPVPCVD-PSYGKDRPAPFSRGGMTSEGHGFRVPG 298
Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
SYVK IACGGRHSAV+TDAGALLTFGWGLYGQ
Sbjct: 299 SYVKGIACGGRHSAVITDAGALLTFGWGLYGQ 330
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 58/122 (47%), Gaps = 27/122 (22%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI- 259
LSP V+ G++I VAAG HT+ +S G V+ +G GQLG GS + TP L+
Sbjct: 340 LSPICVSPLLGIRIAGVAAGLWHTICVSADGDVYAFGGNQFGQLGTGSD-QAETTPRLLD 398
Query: 260 -PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
P LE + K ++CG RHSA+V + G + +GW Y
Sbjct: 399 APSLEDI------------------------HAKVVSCGARHSAIVAEDGKVFCWGWNKY 434
Query: 319 GQ 320
GQ
Sbjct: 435 GQ 436
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLI 259
V+ G RH+ I+++ G+V+ WG+ GQLGLG I + +P+P I
Sbjct: 410 VSCGARHSAIVAEDGKVFCWGWNKYGQLGLGDVIDRNIPSPVTI 453
>gi|356539897|ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 480
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/334 (62%), Positives = 252/334 (75%), Gaps = 16/334 (4%)
Query: 3 MNGSKREENE-KMEECKETVVYMWGYLPGTSPEKSPILSPIPARLC-GGDSWKDVCGGGC 60
MNG E + +ME KE +VYMWGYLPG P+++P+L+P+ R+ G SWKDVCGGGC
Sbjct: 1 MNGEGSEAMQVEMEIEKERLVYMWGYLPGALPQRTPLLTPVLVRVPPSGYSWKDVCGGGC 60
Query: 61 GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
GFA+A SE GKLITWGS DD GQSY+TSGKHGE PEPFPLPTE ++VKAAAGWAHCVSVT
Sbjct: 61 GFAMAISEPGKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEVTIVKAAAGWAHCVSVT 120
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK---------- 170
+ GEVYTWGWRECVPS KV + + S +KD G+QS+ TEQ P +
Sbjct: 121 DCGEVYTWGWRECVPSGKVFGESLTGVSPEKDVPGRQSSFLTEQVSPRSQGSKSTGGTAS 180
Query: 171 -RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
+GEE KRR+ SSA++ +E +S D+ T PCLVTLNPGV+I VAAGGRHTL LSD
Sbjct: 181 GTSGEESSKRRRVSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHTLALSD 240
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR- 288
+GQVWGWGYGGEGQLGLGSRI+MV +PHL+PC+ ++ GKD + +GS++S G+ R
Sbjct: 241 IGQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINSSSYGKDISASLARGSMSSDGQNFRV 300
Query: 289 --SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
SY+K IACGGRHSAV+TDAGA+LTFGWGLYGQ
Sbjct: 301 PGSYIKGIACGGRHSAVITDAGAVLTFGWGLYGQ 334
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 59/121 (48%), Gaps = 25/121 (20%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLI 259
LSP V+ G++I VAAG HT+ S G V+ +G GQLG G + + +P
Sbjct: 344 LSPNCVSSLLGIRIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGGDQAETIPRLLDC 403
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
P LE+ VN VK I+CG RH+A++TD G + +GW YG
Sbjct: 404 PSLEN---------------VN---------VKRISCGARHTALITDNGKVFCWGWNKYG 439
Query: 320 Q 320
Q
Sbjct: 440 Q 440
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLI 259
V + +++ G RHT +++D G+V+ WG+ GQLGLG I + +P+ I
Sbjct: 409 VNVKRISCGARHTALITDNGKVFCWGWNKYGQLGLGDVIDRNIPSEVTI 457
>gi|224138854|ref|XP_002322918.1| predicted protein [Populus trichocarpa]
gi|222867548|gb|EEF04679.1| predicted protein [Populus trichocarpa]
Length = 467
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/321 (64%), Positives = 239/321 (74%), Gaps = 17/321 (5%)
Query: 7 KREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARL-CGGDSWKDVCGGGCGFALA 65
K +E+ KMEE K+ VYMWGYLPG SPEKSPIL+PI DSWKDVCGGGCGFA+A
Sbjct: 9 KEQEDGKMEEGKKATVYMWGYLPGVSPEKSPILNPISVNYPDADDSWKDVCGGGCGFAMA 68
Query: 66 TSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEV 125
SE GKL+TWGSADDE QSY+T GKHGETPE F LP+EAS++KAAA + GE+
Sbjct: 69 ISEGGKLVTWGSADDENQSYVTCGKHGETPEAFLLPSEASILKAAA---------DTGEL 119
Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ---APPSDKRAGEEVVKRRKT 182
YTWGW+ECVP K RD S G+ QKD+ KQ+ L TEQ A DKR GEE+VKRR+
Sbjct: 120 YTWGWKECVPLGKFPRDGASWGALQKDNAAKQNVLSTEQVSSASSDDKRNGEEIVKRRRV 179
Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
S +EE+EN GDE+FT++P +V+L PGV+IT VAAGGRHTL LSD GQVWGWGYGGEG
Sbjct: 180 S-LKEENENSEYGDEYFTVTPAIVSLGPGVRITSVAAGGRHTLALSDTGQVWGWGYGGEG 238
Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR---SYVKEIACGGR 299
QLGLGSR+KMV +PHLIP E +GK R +V GS N + SYVKEIACGGR
Sbjct: 239 QLGLGSRVKMVSSPHLIPFTEQPTTGKHRSSVVHNGSTNLPAQVSNFPGSYVKEIACGGR 298
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
HSAVVTDAG LLTFGWGLYGQ
Sbjct: 299 HSAVVTDAGTLLTFGWGLYGQ 319
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 107/274 (39%), Gaps = 74/274 (27%)
Query: 82 GQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTR 141
G Y T TP L + AAG H +++++ G+V+ WG
Sbjct: 191 GDEYFTV-----TPAIVSLGPGVRITSVAAGGRHTLALSDTGQVWGWG------------ 233
Query: 142 DFGSAGSFQKDSTGKQSALP-----TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD 196
+G G S K + P TEQ P+ + VV T+
Sbjct: 234 -YGGEGQLGLGSRVKMVSSPHLIPFTEQ--PTTGKHRSSVVHNGSTNL------------ 278
Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
P V+ PG + ++A GGRH+ +++D G + +G+G GQ G GS + P
Sbjct: 279 ------PAQVSNFPGSYVKEIACGGRHSAVVTDAGTLLTFGWGLYGQCGHGSTNDQL-RP 331
Query: 257 HLIPCL-----EHAASGKDRPLLVR-QGSV-----NSSGKAG------------------ 287
+P L E A+G + + G V N G+ G
Sbjct: 332 TSLPSLSGIQIERIAAGLWHTMCITIDGRVYVFGGNQFGQLGTGASQGETLPRLLEDPCL 391
Query: 288 -RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
VK ++CG RHSA++ + G + ++GW YGQ
Sbjct: 392 ESKLVKMVSCGARHSAILLEDGQVFSWGWNKYGQ 425
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Query: 203 PCLVTLNPGVKITK-VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
PCL + K+ K V+ G RH+ IL + GQV+ WG+ GQLG+G I TP +P
Sbjct: 389 PCLES-----KLVKMVSCGARHSAILLEDGQVFSWGWNKYGQLGVGDSIDR-NTPTQVP 441
>gi|225449388|ref|XP_002282470.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Vitis
vinifera]
Length = 484
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/339 (61%), Positives = 251/339 (74%), Gaps = 22/339 (6%)
Query: 3 MNGSKREENEK--MEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGG-DSWKDVCGGG 59
MNG + +E ME +E +V+M GYLPG P++SP+LSPI R +W+DVCGGG
Sbjct: 1 MNGEGKGPDEAVVMEGVREKLVFMMGYLPGALPQRSPLLSPIAVRSPASIHAWRDVCGGG 60
Query: 60 CGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSV 119
CGFA+A SESGKLITWGS DD GQSY+TSGKHGETPEPFPLPTEAS+VKAAAGWAHC SV
Sbjct: 61 CGFAMAISESGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCASV 120
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP------------ 167
TE GEVYTWGW+ECVPS KV D GS +KD +QS+ TEQ P
Sbjct: 121 TENGEVYTWGWKECVPSGKVFGDPSVGGSLEKDVFERQSSFLTEQVSPRTQGSRSTAGGV 180
Query: 168 ---SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
K GEE KRR+ S+++ +E+ +SGDE + PCLVTLNPGV+I VAAGGRHT
Sbjct: 181 SGTDSKGGGEESTKRRRMLSSKQAAES-SSGDETLSALPCLVTLNPGVRIANVAAGGRHT 239
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L LSD+GQVWGWGYGGEGQLGLGSRI+MV +PH +PC+E ++ GK+R + +G+V++ G
Sbjct: 240 LALSDVGQVWGWGYGGEGQLGLGSRIRMVSSPHPVPCVESSSYGKERSSALARGNVSTEG 299
Query: 285 KAGR---SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
++ R SYVK IACGGRHSAV+TDAGALL FGWGLYGQ
Sbjct: 300 QSLRVPGSYVKWIACGGRHSAVITDAGALLMFGWGLYGQ 338
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 23/120 (19%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
LSP V+ G++I +VAAG HT+ +S G V+ +G GQLG G V P +P
Sbjct: 348 LSPTCVSSLLGIQIERVAAGLWHTVCISADGDVYTFGGNQFGQLGTG-----VDQPETLP 402
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
L A S ++ ++ K ++CG RHSA++T G + ++GW YGQ
Sbjct: 403 RLLDAPSLEN------------------AHAKIVSCGARHSAIITADGKMFSWGWNKYGQ 444
>gi|297740323|emb|CBI30505.3| unnamed protein product [Vitis vinifera]
Length = 478
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/320 (65%), Positives = 242/320 (75%), Gaps = 24/320 (7%)
Query: 24 MWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVCGGGCGFALATSESGKLITWGSAD 79
MWGYLPG S + SP+LSP+P L DSWKDVCGGGCGFA+A SESGKLITWGS D
Sbjct: 1 MWGYLPGASLQGSPLLSPVPVALPTSTLSEDSWKDVCGGGCGFAVAISESGKLITWGSED 60
Query: 80 DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKV 139
D GQSYLTSG+HGETPEPFPLPTEA +VKAAAGWAHCVS+T+ GE YTWGW+ECVPS KV
Sbjct: 61 DLGQSYLTSGQHGETPEPFPLPTEAPIVKAAAGWAHCVSLTDKGEAYTWGWKECVPSGKV 120
Query: 140 TRDFGSAGSFQKDSTGKQSALPTEQAPP---------------SDKRAGEEVVKRRKTSS 184
D + F+KDS GKQS L TEQ P +++A E +K+R+TSS
Sbjct: 121 LLD-STGVRFEKDSFGKQSLLQTEQEGPKPQSSNSTGGMLSRVDNRKAREGSIKKRRTSS 179
Query: 185 AREESENPA-SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
A++E E+ + S DE F SPCLVTL PGV+I+ +AAGGRHTL LSDMGQVWGWGYGGEGQ
Sbjct: 180 AKQEPESSSMSDDETFLASPCLVTLGPGVRISTIAAGGRHTLALSDMGQVWGWGYGGEGQ 239
Query: 244 LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS---GKAGRSYVKEIACGGRH 300
LGLGSR K+V +PHLIPC +A GKDRP LV QGS++S+ K S VK IACGGRH
Sbjct: 240 LGLGSRTKLVSSPHLIPCFNPSAYGKDRPSLVHQGSLSSTEDISKVPGSRVKGIACGGRH 299
Query: 301 SAVVTDAGALLTFGWGLYGQ 320
SAV+TDAG LLTFGWGL+GQ
Sbjct: 300 SAVITDAGQLLTFGWGLHGQ 319
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 23/126 (18%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G+ L P V+ GVK+ +AAG HTL S GQV+ +G GQLG G+
Sbjct: 323 GNTHDQLRPACVSALSGVKVAGIAAGLWHTLCFSAEGQVYAFGGNQFGQLGTGAD----- 377
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
+P L A++ +++ K ++CG RHS V+T+ G + ++G
Sbjct: 378 QAETLPKLLDASNLENK------------------RAKIVSCGARHSVVLTEGGEIFSWG 419
Query: 315 WGLYGQ 320
W YGQ
Sbjct: 420 WNKYGQ 425
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 196 DEFFTLSPCLVTLNPGVKITK-VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMV 253
D+ TL L N K K V+ G RH+++L++ G+++ WG+ GQLGLG I + +
Sbjct: 377 DQAETLPKLLDASNLENKRAKIVSCGARHSVVLTEGGEIFSWGWNKYGQLGLGDCIDRNI 436
Query: 254 PTP 256
P+P
Sbjct: 437 PSP 439
>gi|356569137|ref|XP_003552762.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Glycine max]
Length = 472
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/333 (61%), Positives = 250/333 (75%), Gaps = 22/333 (6%)
Query: 3 MNGSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLC-GGDSWKDVCGGGCG 61
MNG E +E M+ KE++VYMWGYLPG P+++P+L+P+ R+ G WKDVCGGGCG
Sbjct: 1 MNG---EGSEAMQVEKESLVYMWGYLPGALPQRTPLLTPLLVRVPPSGYFWKDVCGGGCG 57
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
FA+A SE GKLITWGS DD GQSY+TSGKHGETPEPFPLPTE ++VKAAAGWAHCVSVT+
Sbjct: 58 FAMAISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEVTIVKAAAGWAHCVSVTD 117
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK----------- 170
GEVYTWGWRECVPS KV + + S +KD +QS+ TEQ P +
Sbjct: 118 CGEVYTWGWRECVPSGKVFGESLTGVSPEKDVPRRQSSFLTEQVSPRSQGSKSTGGTASG 177
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
+GEE KRR+ SSA++ +E +S D+ T PCLVTLNPGV+I VAAGGRHTL LSD+
Sbjct: 178 TSGEESSKRRRVSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHTLALSDI 237
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR-- 288
GQVWGWGYGGEGQLGLGSRI+MV +PHL+PC+ ++ GKD + S++S G+ R
Sbjct: 238 GQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINSSSYGKDMARV----SISSDGQNFRVP 293
Query: 289 -SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
SY+K IACGGRHSAV+TDAGA+LTFGWGLYGQ
Sbjct: 294 GSYIKGIACGGRHSAVITDAGAVLTFGWGLYGQ 326
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 58/121 (47%), Gaps = 25/121 (20%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLI 259
LSP V+ G++I VAAG HT+ S G V+ +G GQLG G + + +P
Sbjct: 336 LSPSCVSSLLGIQIEGVAAGLWHTVCTSVDGDVYAFGGNQFGQLGTGGDQAETIPRLLDC 395
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
P LE+ VN VK I+CG RH+A++ D G + +GW YG
Sbjct: 396 PSLEN---------------VN---------VKRISCGARHTALIADNGKVFCWGWNKYG 431
Query: 320 Q 320
Q
Sbjct: 432 Q 432
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLI 259
V + +++ G RHT +++D G+V+ WG+ GQLGLG I + +P+ I
Sbjct: 401 VNVKRISCGARHTALIADNGKVFCWGWNKYGQLGLGDVIDRNIPSEVTI 449
>gi|334185962|ref|NP_190951.2| Regulator of chromosome condensation (RCC1) family protein
[Arabidopsis thaliana]
gi|332645627|gb|AEE79148.1| Regulator of chromosome condensation (RCC1) family protein
[Arabidopsis thaliana]
Length = 472
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/315 (63%), Positives = 237/315 (75%), Gaps = 11/315 (3%)
Query: 16 ECKETVVYMWGYLPGTSPEKSPILSPIPARLC----GGDSWKDVCGGGCGFALATSESGK 71
ECK TVVYM GYLPG + EKSPILSP+P RL GGDSWKDVCGGGCGFA+A SE GK
Sbjct: 13 ECKATVVYMSGYLPGAASEKSPILSPVPVRLSAAVHGGDSWKDVCGGGCGFAMAISEKGK 72
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
LITWGS DDEGQSY+ SGKHGETPEPFPLPTEA VV+A++GWAHC VTE GE +TWGW+
Sbjct: 73 LITWGSTDDEGQSYVASGKHGETPEPFPLPTEAPVVQASSGWAHCAVVTETGEAFTWGWK 132
Query: 132 ECVPSAKVTRDFGSAGSFQKD--STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
EC+PS S S Q D S G +A T +++ GEE VKRR+ S+A++E+
Sbjct: 133 ECIPSKDPVGKQQSGSSEQGDIASQGSNAASGTT-LQNENQKVGEESVKRRRVSTAKDET 191
Query: 190 ENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
E SG +FF +P LV++ GV+IT VA GGRHTL LSD+GQ+WGWGYGGEGQLGLGSR
Sbjct: 192 EGHTSGGDFFATTPSLVSVGLGVRITSVATGGRHTLALSDLGQIWGWGYGGEGQLGLGSR 251
Query: 250 IKMVPTPHLIPCLEHAASGKDRPLLVRQ-GSVNSSGKAGR---SYVKEIACGGRHSAVVT 305
IKMV +PHLIPCLE SGK+R ++ Q G+ +S +A R Y+K I+CGGRHSA +T
Sbjct: 252 IKMVSSPHLIPCLESIGSGKERSFILHQGGTTTTSAQASREPGQYIKAISCGGRHSAAIT 311
Query: 306 DAGALLTFGWGLYGQ 320
DAG L+TFGWGLYGQ
Sbjct: 312 DAGGLITFGWGLYGQ 326
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 128/335 (38%), Gaps = 66/335 (19%)
Query: 23 YMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATS----------ESGKL 72
+ WG+ E P P+ + G D+ G A T+ ES K
Sbjct: 127 FTWGW-----KECIPSKDPVGKQQSGSSEQGDIASQGSNAASGTTLQNENQKVGEESVKR 181
Query: 73 ITWGSADDEGQSYLTSGKH-GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW- 130
+A DE + + + G TP + + A G H +++++ G+++ WG+
Sbjct: 182 RRVSTAKDETEGHTSGGDFFATTPSLVSVGLGVRITSVATGGRHTLALSDLGQIWGWGYG 241
Query: 131 ----------RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
+ V S + S GS ++ S T + + + G+ +K
Sbjct: 242 GEGQLGLGSRIKMVSSPHLIPCLESIGSGKERSFILHQGGTTTTSAQASREPGQ-YIKAI 300
Query: 181 KTSSAREESENPASGDEFF---------------TLSPCLVTLNPGVKITKVAAGGRHTL 225
+ A G F L P V+ V++ VAAG HT+
Sbjct: 301 SCGGRHSAAITDAGGLITFGWGLYGQCGHGNTNDQLRPMAVSEVKSVRMESVAAGLWHTI 360
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
+S G+V+ +G GQLG G+ +HA + P L+ N GK
Sbjct: 361 CISSDGKVYAFGGNQFGQLGTGT--------------DHA---EILPRLLD--GQNLEGK 401
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ K ++CG RHSAV+ + G LL +GW YGQ
Sbjct: 402 ----HAKAVSCGARHSAVLAEDGQLLCWGWNKYGQ 432
>gi|356551654|ref|XP_003544189.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 477
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/321 (61%), Positives = 243/321 (75%), Gaps = 15/321 (4%)
Query: 15 EECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGD-SWKDVCGGGCGFALATSESGKLI 73
E +TV+YMWGYLPG P+++P+L+P+ R+ D SW DVCGGGCGFA+A SESGKLI
Sbjct: 11 EGALQTVLYMWGYLPGALPQRTPLLTPVAVRVPPCDYSWNDVCGGGCGFAIAISESGKLI 70
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
TWGS DD GQSY+TSGKHGETPEPFPLPTEAS+VKAAAGWAHCV+VTE G VYTWGW+EC
Sbjct: 71 TWGSTDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCVAVTEHGAVYTWGWKEC 130
Query: 134 VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-----------RAGEEVVKRRKT 182
+PS +V + + S +KD G+ S + TEQ P + +GEE KRR+
Sbjct: 131 IPSGRVFGEPSTGVSLEKDVPGRHSQVSTEQVSPRSQGSRSTGGTASSNSGEESTKRRRV 190
Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
SSA++ +E+ +S D+ T PCLVTLNPG++I VAAGGRHTL LSD G VW WGYGGEG
Sbjct: 191 SSAKQTAESSSSSDDSLTAFPCLVTLNPGIRIASVAAGGRHTLALSDTGLVWAWGYGGEG 250
Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR---SYVKEIACGGR 299
QLGLGSRI+MV TPHL+PC++ + KDR + +G+++S G+ R SY+K IACGGR
Sbjct: 251 QLGLGSRIRMVSTPHLVPCIDSSYYSKDRSATLARGNMDSEGQTFRVPGSYIKRIACGGR 310
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
HSAV+TDAGALLTFGWGLYGQ
Sbjct: 311 HSAVITDAGALLTFGWGLYGQ 331
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 23/120 (19%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
LSP V+ G+ I +VAAG HT+ S G V+ +G GQLG G
Sbjct: 341 LSPTCVSSILGIHIERVAAGLWHTVCTSADGDVYAFGENQFGQLGTG------------- 387
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
A + P L+ S+++ K I+CG RH+A+VT+ G + +GW YGQ
Sbjct: 388 ----ADQAETLPRLLDSPSLDNL------RAKNISCGARHTALVTEGGKVFCWGWNKYGQ 437
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 41/197 (20%)
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP 135
G+ D EGQ++ G + + + A G H +T+AG + T+GW
Sbjct: 286 GNMDSEGQTFRVPGSY--------------IKRIACGGRHSAVITDAGALLTFGWGL--- 328
Query: 136 SAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE--EVVKRRKTSSAREESENP- 192
+G G D + + + ++ A V EN
Sbjct: 329 -------YGQCGQGITDDELSPTCVSSILGIHIERVAAGLWHTVCTSADGDVYAFGENQF 381
Query: 193 ----ASGDEFFTL-----SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
D+ TL SP L L + ++ G RHT ++++ G+V+ WG+ GQ
Sbjct: 382 GQLGTGADQAETLPRLLDSPSLDNL----RAKNISCGARHTALVTEGGKVFCWGWNKYGQ 437
Query: 244 LGLGSRI-KMVPTPHLI 259
LGLG I + +P+ +I
Sbjct: 438 LGLGDVIDRNIPSEVII 454
>gi|356501083|ref|XP_003519358.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 477
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/335 (59%), Positives = 245/335 (73%), Gaps = 19/335 (5%)
Query: 1 MEMNGSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGD-SWKDVCGGG 59
M MN + ++ V+YMWGYLPG P+++P+L+P+ R+ D SW DVCGGG
Sbjct: 1 MAMNNGDGTDGGALQR----VLYMWGYLPGALPQRTPLLTPVAVRVPPCDYSWNDVCGGG 56
Query: 60 CGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSV 119
CGFA+A SESGKLITWGS DD GQSY+TSGKHGETPEPFPLPTE S+VKAAAGWAHCV+V
Sbjct: 57 CGFAIAISESGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTETSIVKAAAGWAHCVAV 116
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK--------- 170
TE GEVYTWGW+EC+PS KV + + S +KD G+ + L TEQ P +
Sbjct: 117 TEHGEVYTWGWKECIPSGKVFGESSTGVSLEKDVPGRHTPLFTEQVSPRSQGSRSTGGTA 176
Query: 171 --RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+GEE KRR+ SSA++ +E+ +S D+ T PCLVTLNPG++I VAAGGRHTL LS
Sbjct: 177 SSNSGEESTKRRRVSSAKQTAESSSSSDDSLTAFPCLVTLNPGIRIASVAAGGRHTLALS 236
Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
D G VW WGYGGEGQLGLGSRI+MV TPHL+PC++ + KDR + +G++ S G+ R
Sbjct: 237 DTGLVWAWGYGGEGQLGLGSRIRMVSTPHLVPCIDSSYYVKDRSATLARGNMGSEGQTFR 296
Query: 289 ---SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
SY+K IACGGRHSAV+TDAGALLTFGWGLYGQ
Sbjct: 297 IPGSYIKRIACGGRHSAVITDAGALLTFGWGLYGQ 331
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 100/244 (40%), Gaps = 57/244 (23%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
+ AAG H +++++ G V+ WG +G G S + + P
Sbjct: 222 IASVAAGGRHTLALSDTGLVWAWG-------------YGGEGQLGLGSRIRMVSTP-HLV 267
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
P D VK R + AR N S + F + PG I ++A GGRH+
Sbjct: 268 PCIDS---SYYVKDRSATLARG---NMGSEGQTFRI--------PGSYIKRIACGGRHSA 313
Query: 226 ILSDMGQVWGWGYGGEGQLGLG-SRIKMVPT---PHLIPCLEHAASGKDRPLLVR-QGSV 280
+++D G + +G+G GQ G G + ++ PT L +E A+G + G V
Sbjct: 314 VITDAGALLTFGWGLYGQCGQGITDDELSPTCVSSLLGIHIEGIAAGLWHTVCTSADGDV 373
Query: 281 -----NSSGKAG-------------------RSYVKEIACGGRHSAVVTDAGALLTFGWG 316
N G+ G + K I+CG RH+A+VT+ G + +GW
Sbjct: 374 YAFGGNQFGQLGTGADQAETLPRLVDSPSLKNLHAKNISCGARHTALVTEGGKVFCWGWN 433
Query: 317 LYGQ 320
YGQ
Sbjct: 434 KYGQ 437
>gi|356569139|ref|XP_003552763.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Glycine max]
Length = 459
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/322 (63%), Positives = 247/322 (76%), Gaps = 13/322 (4%)
Query: 3 MNGSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLC-GGDSWKDVCGGGCG 61
MNG E +E M+ KE++VYMWGYLPG P+++P+L+P+ R+ G WKDVCGGGCG
Sbjct: 1 MNG---EGSEAMQVEKESLVYMWGYLPGALPQRTPLLTPLLVRVPPSGYFWKDVCGGGCG 57
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
FA+A SE GKLITWGS DD GQSY+TSGKHGETPEPFPLPTE ++VKAAAGWAHCVSVT+
Sbjct: 58 FAMAISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEVTIVKAAAGWAHCVSVTD 117
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
GEVYTWGWRECVPS KV + + S +KD +QS+ T + +GEE KRR+
Sbjct: 118 CGEVYTWGWRECVPSGKVFGESLTGVSPEKDVPRRQSSKST--GGTASGTSGEESSKRRR 175
Query: 182 TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
SSA++ +E +S D+ T PCLVTLNPGV+I VAAGGRHTL LSD+GQVWGWGYGGE
Sbjct: 176 VSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHTLALSDIGQVWGWGYGGE 235
Query: 242 GQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR---SYVKEIACGG 298
GQLGLGSRI+MV +PHL+PC+ ++ GKD + S++S G+ R SY+K IACGG
Sbjct: 236 GQLGLGSRIRMVSSPHLVPCINSSSYGKDMARV----SISSDGQNFRVPGSYIKGIACGG 291
Query: 299 RHSAVVTDAGALLTFGWGLYGQ 320
RHSAV+TDAGA+LTFGWGLYGQ
Sbjct: 292 RHSAVITDAGAVLTFGWGLYGQ 313
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 58/121 (47%), Gaps = 25/121 (20%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLI 259
LSP V+ G++I VAAG HT+ S G V+ +G GQLG G + + +P
Sbjct: 323 LSPSCVSSLLGIQIEGVAAGLWHTVCTSVDGDVYAFGGNQFGQLGTGGDQAETIPRLLDC 382
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
P LE+ VN VK I+CG RH+A++ D G + +GW YG
Sbjct: 383 PSLEN---------------VN---------VKRISCGARHTALIADNGKVFCWGWNKYG 418
Query: 320 Q 320
Q
Sbjct: 419 Q 419
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLI 259
V + +++ G RHT +++D G+V+ WG+ GQLGLG I + +P+ I
Sbjct: 388 VNVKRISCGARHTALIADNGKVFCWGWNKYGQLGLGDVIDRNIPSEVTI 436
>gi|147790448|emb|CAN69973.1| hypothetical protein VITISV_001453 [Vitis vinifera]
Length = 498
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/332 (64%), Positives = 243/332 (73%), Gaps = 37/332 (11%)
Query: 13 KMEECKETVVYMWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVCGGGCGFALATSE 68
KMEE +VVYMWGYLPG S + SP+LSP+P L DSWKDVCGGGCGFA+A SE
Sbjct: 2 KMEE---SVVYMWGYLPGASLQGSPLLSPVPVALPASTLSEDSWKDVCGGGCGFAVAISE 58
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
SGKLITWGS DD GQSYLTSG+HGETPEPFPLPTEA +VKAAAGWAHCVS+T+ GE YTW
Sbjct: 59 SGKLITWGSEDDLGQSYLTSGQHGETPEPFPLPTEAPIVKAAAGWAHCVSLTDKGEAYTW 118
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP---TEQAPP-------------SDKRA 172
GW+ECVPS KV DSTG A P TE P +++A
Sbjct: 119 GWKECVPSGKVLL----------DSTGTNVAKPELDTEGPKPQXSNSTGGMLSRVDNRKA 168
Query: 173 GEEVVKRRKTSSAREESENPA-SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
E +K+R+TSSA++E E+ + S DE F SPCLVTL PGV+I+ VAAGGRHTL LSDMG
Sbjct: 169 REGSIKKRRTSSAKQEPESSSMSDDETFLASPCLVTLGPGVRISTVAAGGRHTLALSDMG 228
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS---GKAGR 288
QVWGWGYGGEGQLGLGSR K+V +PHLIPC +A GKDRP LV QGS++S+ K
Sbjct: 229 QVWGWGYGGEGQLGLGSRTKLVSSPHLIPCFNPSAYGKDRPSLVHQGSLSSTEDISKVPG 288
Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
S VK IACGGRHSAV+TDAG LLTFGWGL+GQ
Sbjct: 289 SRVKGIACGGRHSAVITDAGQLLTFGWGLHGQ 320
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 59/126 (46%), Gaps = 4/126 (3%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G+ L P V+ GVK+ +AAG HTL S GQV+ +G GQLG G+
Sbjct: 324 GNTHDQLRPACVSALSGVKVXGIAAGLWHTLCFSAEGQVYAFGGNQFGQLGTGADQAEFD 383
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
+ IP L L + N K K ++CG RHS V+T+ G + ++G
Sbjct: 384 SRIXIPSLGEFRKRLTETLPKLLDASNLENK----RAKIVSCGARHSVVLTEGGEIFSWG 439
Query: 315 WGLYGQ 320
W YGQ
Sbjct: 440 WNKYGQ 445
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 25/111 (22%)
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
PG ++ +A GGRH+ +++D GQ+ +G+G GQ GLG+ L P A SG
Sbjct: 287 PGSRVKGIACGGRHSAVITDAGQLLTFGWGLHGQCGLGNT-----HDQLRPACVSALSGV 341
Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V IA G H+ + G + FG +GQ
Sbjct: 342 K--------------------VXGIAAGLWHTLCFSAEGQVYAFGGNQFGQ 372
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTP 256
V+ G RH+++L++ G+++ WG+ GQLGLG I + +P+P
Sbjct: 419 VSCGARHSVVLTEGGEIFSWGWNKYGQLGLGDCIDRNIPSP 459
>gi|296086178|emb|CBI31619.3| unnamed protein product [Vitis vinifera]
Length = 461
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/316 (63%), Positives = 238/316 (75%), Gaps = 20/316 (6%)
Query: 24 MWGYLPGTSPEKSPILSPIPARLCGG-DSWKDVCGGGCGFALATSESGKLITWGSADDEG 82
M GYLPG P++SP+LSPI R +W+DVCGGGCGFA+A SESGKLITWGS DD G
Sbjct: 1 MMGYLPGALPQRSPLLSPIAVRSPASIHAWRDVCGGGCGFAMAISESGKLITWGSTDDLG 60
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
QSY+TSGKHGETPEPFPLPTEAS+VKAAAGWAHC SVTE GEVYTWGW+ECVPS KV D
Sbjct: 61 QSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCASVTENGEVYTWGWKECVPSGKVFGD 120
Query: 143 FGSAGSFQKDSTGKQSALPTEQAPP---------------SDKRAGEEVVKRRKTSSARE 187
GS +KD +QS+ TEQ P K GEE KRR+ S+++
Sbjct: 121 PSVGGSLEKDVFERQSSFLTEQVSPRTQGSRSTAGGVSGTDSKGGGEESTKRRRMLSSKQ 180
Query: 188 ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
+E+ +SGDE + PCLVTLNPGV+I VAAGGRHTL LSD+GQVWGWGYGGEGQLGLG
Sbjct: 181 AAES-SSGDETLSALPCLVTLNPGVRIANVAAGGRHTLALSDVGQVWGWGYGGEGQLGLG 239
Query: 248 SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR---SYVKEIACGGRHSAVV 304
SRI+MV +PH +PC+E ++ GK+R + +G+V++ G++ R SYVK IACGGRHSAV+
Sbjct: 240 SRIRMVSSPHPVPCVESSSYGKERSSALARGNVSTEGQSLRVPGSYVKWIACGGRHSAVI 299
Query: 305 TDAGALLTFGWGLYGQ 320
TDAGALL FGWGLYGQ
Sbjct: 300 TDAGALLMFGWGLYGQ 315
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 23/120 (19%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
LSP V+ G++I +VAAG HT+ +S G V+ +G GQLG G V P +P
Sbjct: 325 LSPTCVSSLLGIQIERVAAGLWHTVCISADGDVYTFGGNQFGQLGTG-----VDQPETLP 379
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
L A S ++ ++ K ++CG RHSA++T G + ++GW YGQ
Sbjct: 380 RLLDAPSLEN------------------AHAKIVSCGARHSAIITADGKMFSWGWNKYGQ 421
>gi|357460949|ref|XP_003600756.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355489804|gb|AES71007.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 464
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/320 (60%), Positives = 239/320 (74%), Gaps = 23/320 (7%)
Query: 16 ECKETVVYMWGYLPGTSPEKSPILSPIPARL---CGGDSWKDVCGGGCGFALATSESGKL 72
E KE +VYMWGYLPG P+++P+L+P+ R+ GG +WKDV GGGCGFA+A SESGKL
Sbjct: 7 EVKEKMVYMWGYLPGALPQRTPLLTPVLVRVPATSGGYNWKDVSGGGCGFAMAISESGKL 66
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
ITWGS DD GQSY+TSGKHGETPEPF LP E S+VKAA+ WAHCV+ T+ GEVYTWGW+E
Sbjct: 67 ITWGSTDDLGQSYVTSGKHGETPEPFSLPNEVSIVKAASAWAHCVAATDCGEVYTWGWKE 126
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK---------RAGEEVVKRRKTS 183
C+PS KV + S +KD+ GK S+ TEQ + +GEE KRRK S
Sbjct: 127 CIPSGKVFGETSQGVSPEKDAQGKPSSFLTEQVSSRSQVSKSTGGTVSSGEESSKRRKVS 186
Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
SA++ ++ +SGD+ T PCLVTLNPGVKIT VAAGGRHTL+LSD+GQVWGWGYGGEGQ
Sbjct: 187 SAKQAAQTSSSGDDILTAMPCLVTLNPGVKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQ 246
Query: 244 LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR---SYVKEIACGGRH 300
LGLGSR++MV +PH+IPC++ ++ + QGS++S G R S +K IACGGRH
Sbjct: 247 LGLGSRVRMVSSPHIIPCIDSSS--------LVQGSMSSEGHNFRIPGSCIKAIACGGRH 298
Query: 301 SAVVTDAGALLTFGWGLYGQ 320
SAV+TDAGA+L FGWGLYGQ
Sbjct: 299 SAVITDAGAVLAFGWGLYGQ 318
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 61/121 (50%), Gaps = 25/121 (20%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLI 259
LSP V+ G++I VAAG HT+ S G V+ +G GQLG GS + + +P
Sbjct: 328 LSPTCVSSLLGIQIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETLPRLLDC 387
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
P LE+ VN VK I+CG RH+A+VTD G + ++GW YG
Sbjct: 388 PSLEN---------------VN---------VKTISCGARHTALVTDNGKVFSWGWNKYG 423
Query: 320 Q 320
Q
Sbjct: 424 Q 424
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPT 255
V + ++ G RHT +++D G+V+ WG+ GQLGLG I + +P+
Sbjct: 393 VNVKTISCGARHTALVTDNGKVFSWGWNKYGQLGLGDVIDRNIPS 437
>gi|449465846|ref|XP_004150638.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
gi|449516435|ref|XP_004165252.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
Length = 491
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/345 (59%), Positives = 254/345 (73%), Gaps = 27/345 (7%)
Query: 3 MNGS-KREENEKM---EECKET-VVYMWGYLPGTSPEKSPILSPIPARLCGGDS-----W 52
MNG R E+E + E+ K+ +V+MWGYLPG P++SP+LSP+ RL G D+ W
Sbjct: 1 MNGEGSRGEDEIVGMEEDVKDNKIVFMWGYLPGALPQRSPLLSPVVVRLPGKDATDAHGW 60
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
+DVCGGGCGFA+A S +GKLITWG+ DD GQSY+TSGKHGETPEPFPLPTEAS+VKAAAG
Sbjct: 61 RDVCGGGCGFAVAISANGKLITWGATDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAG 120
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS---- 168
WAH V++T+ GEVYTWGW+ECVPS K+ D + ++++D +QS+ +Q P
Sbjct: 121 WAHTVAITDRGEVYTWGWKECVPSGKMFTDLSAGAAYERDVLERQSSSVIDQVSPRLQAS 180
Query: 169 ---------DKRA-GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVA 218
+ RA G E KRR+ SSA+ +E+ +S DE + PCLVTLNPGV+IT V+
Sbjct: 181 RSSGVVSSIEARAGGAESTKRRRVSSAKLAAESSSSSDETLSAVPCLVTLNPGVRITSVS 240
Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
AGGRHTL LSDMGQVWGWGYGGEGQLGLGSRI+MV +PH IPC+E ++ GKDR + +G
Sbjct: 241 AGGRHTLALSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSSFGKDRSAALARG 300
Query: 279 SVNSSGKAGR---SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
S + G+ R SYVK IACGGRHSA VTDAGALLTFGWGLYGQ
Sbjct: 301 SASLEGQGSRIPGSYVKGIACGGRHSAAVTDAGALLTFGWGLYGQ 345
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 25/121 (20%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLI 259
LSP V+ G++I VAAG HT+ +S G ++ +G GQLG G+ + + +P
Sbjct: 355 LSPTCVSSLLGIRIESVAAGLWHTVCISSDGDIYSFGGNQFGQLGTGADQAETLPRLLDA 414
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
P +E+ VN+ K ++CG RHSA+V++ G + +GW YG
Sbjct: 415 PSVEN---------------VNA---------KVVSCGARHSAIVSEDGKVFCWGWNKYG 450
Query: 320 Q 320
Q
Sbjct: 451 Q 451
>gi|7630003|emb|CAB88345.1| putative protein [Arabidopsis thaliana]
Length = 487
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/330 (60%), Positives = 237/330 (71%), Gaps = 26/330 (7%)
Query: 16 ECKETVVYMWGYLPGTSPEKSPILSPIPARLC----GGDSWKDVCGGGCGFALATSESGK 71
ECK TVVYM GYLPG + EKSPILSP+P RL GGDSWKDVCGGGCGFA+A SE GK
Sbjct: 13 ECKATVVYMSGYLPGAASEKSPILSPVPVRLSAAVHGGDSWKDVCGGGCGFAMAISEKGK 72
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
LITWGS DDEGQSY+ SGKHGETPEPFPLPTEA VV+A++GWAHC VTE GE +TWGW+
Sbjct: 73 LITWGSTDDEGQSYVASGKHGETPEPFPLPTEAPVVQASSGWAHCAVVTETGEAFTWGWK 132
Query: 132 ECVPSAKVTRDFGSAGSFQKD--STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
EC+PS S S Q D S G +A T +++ GEE VKRR+ S+A++E+
Sbjct: 133 ECIPSKDPVGKQQSGSSEQGDIASQGSNAASGT-TLQNENQKVGEESVKRRRVSTAKDET 191
Query: 190 ENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL---------------SDMGQVW 234
E SG +FF +P LV++ GV+IT VA GGRHTL L SD+GQ+W
Sbjct: 192 EGHTSGGDFFATTPSLVSVGLGVRITSVATGGRHTLALSVEDSFEDDHVFTEVSDLGQIW 251
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ-GSVNSSGKAGR---SY 290
GWGYGGEGQLGLGSRIKMV +PHLIPCLE SGK+R ++ Q G+ +S +A R Y
Sbjct: 252 GWGYGGEGQLGLGSRIKMVSSPHLIPCLESIGSGKERSFILHQGGTTTTSAQASREPGQY 311
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+K I+CGGRHSA +TDAG L+TFGWGLYGQ
Sbjct: 312 IKAISCGGRHSAAITDAGGLITFGWGLYGQ 341
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 62/126 (49%), Gaps = 23/126 (18%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G+ L P V+ V++ VAAG HT+ +S G+V+ +G GQLG G+
Sbjct: 345 GNTNDQLRPMAVSEVKSVRMESVAAGLWHTICISSDGKVYAFGGNQFGQLGTGT------ 398
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
+HA + P L+ N GK + K ++CG RHSAV+ + G LL +G
Sbjct: 399 --------DHA---EILPRLLD--GQNLEGK----HAKAVSCGARHSAVLAEDGQLLCWG 441
Query: 315 WGLYGQ 320
W YGQ
Sbjct: 442 WNKYGQ 447
>gi|297816690|ref|XP_002876228.1| hypothetical protein ARALYDRAFT_485777 [Arabidopsis lyrata subsp.
lyrata]
gi|297322066|gb|EFH52487.1| hypothetical protein ARALYDRAFT_485777 [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/344 (58%), Positives = 237/344 (68%), Gaps = 54/344 (15%)
Query: 16 ECKETVVYMWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVCGGGCGFALATSESGK 71
ECK TVVYM GYLPG +PEKSPILSP+P RL GGDSWKDVCGGGCGFA+A SE GK
Sbjct: 13 ECKATVVYMSGYLPGAAPEKSPILSPVPVRLPAAVHGGDSWKDVCGGGCGFAMAISEKGK 72
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
LITWGS DDEGQSY+ SGKHGETPE FPLPTEA VV+A++GWAHC VTEAGE +TWGW+
Sbjct: 73 LITWGSTDDEGQSYVASGKHGETPELFPLPTEAPVVQASSGWAHCAVVTEAGEAFTWGWK 132
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD---------------KRAGEEV 176
EC+PS KD GKQ + +EQ + ++ GE+
Sbjct: 133 ECIPS--------------KDPVGKQQSGSSEQGEIASQGSNAASGMTLQNETRKVGEDS 178
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL--------- 227
VKRR+ S+A++E+E SG +FF +P LV++ GV+IT VA GGRHTL L
Sbjct: 179 VKRRRVSTAKDETEGHTSGGDFFATAPSLVSVGLGVRITSVATGGRHTLALSVEDSFEDD 238
Query: 228 ------SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG--- 278
SD+GQ+WGWGYGGEGQLGLGSRIKMV +PHLIPCLE SGK+R ++ QG
Sbjct: 239 HVFAEVSDIGQIWGWGYGGEGQLGLGSRIKMVSSPHLIPCLESIGSGKERSFILHQGGTT 298
Query: 279 --SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
S S + GR Y+K I+CGGRHSA +TDAG L+TFGWGLYGQ
Sbjct: 299 TTSTQVSREPGR-YIKAISCGGRHSAAITDAGGLITFGWGLYGQ 341
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 63/126 (50%), Gaps = 23/126 (18%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G+ L P V+ V++ VAAG HT+ +S G+V+ +G GQLG G+
Sbjct: 345 GNTNDQLRPMAVSSMKSVRMESVAAGLWHTICISSDGKVYAFGGNQFGQLGTGT------ 398
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
+HA + P L+ G N GK Y K ++CG RHSAV+ + G LL +G
Sbjct: 399 --------DHA---EILPRLL--GGQNLEGK----YAKAVSCGARHSAVLAEDGQLLCWG 441
Query: 315 WGLYGQ 320
W YGQ
Sbjct: 442 WNKYGQ 447
>gi|326533000|dbj|BAJ89345.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 500
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/329 (57%), Positives = 236/329 (71%), Gaps = 24/329 (7%)
Query: 13 KMEECKETVVYMWGYLPGTSPEKSPILSPIPARL---CGGDSWKDVCGGGCGFALATSES 69
+ E K VV MWGYLPG SP++SP+L P+P RL GD+W+DVCGGGCGFA+A SES
Sbjct: 29 REEAGKGQVVLMWGYLPGVSPQRSPLLGPVPVRLPPAAAGDAWRDVCGGGCGFAMAISES 88
Query: 70 GKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
GKL+TWGS DD GQSY+T+GKH ETPE FPLP++ ++ +A AGWAHCV++T+ G VYTWG
Sbjct: 89 GKLLTWGSTDDMGQSYVTAGKHEETPEAFPLPSDVAIARADAGWAHCVAITDEGVVYTWG 148
Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP---------------PSDKRAGE 174
W+ECVP+ +V D S G+ +KD +QSA +Q PS+ R E
Sbjct: 149 WKECVPTGRVIADQASVGTLEKDE--RQSASANDQVSPRSQVSRTSSGAASGPSESRGTE 206
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+ KRR+ SSA++ +++ SGDE + PC+VT N GVKIT VAAGGRHTL LSD GQVW
Sbjct: 207 DSTKRRRLSSAKQGNDSSTSGDENLSAPPCVVTFNTGVKITAVAAGGRHTLALSDFGQVW 266
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR---SYV 291
GWGYGGEGQLGLGSRI+ V +PH IPC+E A+ KDRP ++ G+ N+ G+ + S V
Sbjct: 267 GWGYGGEGQLGLGSRIRTVSSPHTIPCIESASYSKDRPSAMK-GNKNAEGQINKVMGSRV 325
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
IACGGRHS VVTD+GALL FGWGLYGQ
Sbjct: 326 TAIACGGRHSVVVTDSGALLAFGWGLYGQ 354
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 110/270 (40%), Gaps = 50/270 (18%)
Query: 77 SADDEGQSYLTSGKHGETPEP--FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW---- 130
S+ +G TSG + P T + AAG H +++++ G+V+ WG+
Sbjct: 215 SSAKQGNDSSTSGDENLSAPPCVVTFNTGVKITAVAAGGRHTLALSDFGQVWGWGYGGEG 274
Query: 131 ----------------RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
C+ SA ++D SA K++ G+ + + +
Sbjct: 275 QLGLGSRIRTVSSPHTIPCIESASYSKDRPSAMKGNKNAEGQINKVMGSRVTAIACGGRH 334
Query: 175 EVVKRRK---TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
VV + G+ LSP V+ GVK+ VAAG HT+ +S G
Sbjct: 335 SVVVTDSGALLAFGWGLYGQCGQGNTDDVLSPTCVSAILGVKMQDVAAGLWHTVSISADG 394
Query: 232 QVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
V+ +G GQLG+GS + + +P P LE+ K RS
Sbjct: 395 DVYSFGGNQFGQLGIGSDQAETIPKLVDAPSLEN--------------------KNARS- 433
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
++CG RHSA++TD G + +GW YGQ
Sbjct: 434 ---VSCGARHSAIITDEGEVFCWGWNKYGQ 460
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 5/46 (10%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
V+ G RH+ I++D G+V+ WG+ GQLGLG + +PC+
Sbjct: 434 VSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMD-----RNVPCI 474
>gi|326511212|dbj|BAJ87620.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 511
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/340 (55%), Positives = 237/340 (69%), Gaps = 35/340 (10%)
Query: 13 KMEECKETVVYMWGYLPGTSPEKSPILSPIPARL---CGGDSWKDVCGGGCGFALATSES 69
+ E K VV MWGYLPG SP++SP+L P+P RL GD+W+DVCGGGCGFA+A SES
Sbjct: 29 REEAGKGQVVLMWGYLPGVSPQRSPLLGPVPVRLPPAAAGDAWRDVCGGGCGFAMAISES 88
Query: 70 GKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
GKL+TWGS DD GQSY+T+GKH ETPE FPLP++ ++ +A AGWAHCV++T+ G VYTWG
Sbjct: 89 GKLLTWGSTDDMGQSYVTAGKHEETPEAFPLPSDVAIARADAGWAHCVAITDEGVVYTWG 148
Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ------------------------- 164
W+ECVP+ +V D S G+ +KD +QSA +Q
Sbjct: 149 WKECVPTGRVIADQASVGTLEKDE--RQSASANDQGISHNKGNSIAVSPRSQVSRTSSGA 206
Query: 165 -APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+ PS+ R E+ KRR+ SSA++ +++ SGDE + PC+VT N GVKIT VAAGGRH
Sbjct: 207 ASGPSESRGTEDSTKRRRLSSAKQGNDSSTSGDENLSAPPCVVTFNTGVKITAVAAGGRH 266
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
TL LSD GQVWGWGYGGEGQLGLGSRI+ V +PH IPC+E A+ KDRP ++ G+ N+
Sbjct: 267 TLALSDFGQVWGWGYGGEGQLGLGSRIRTVSSPHTIPCIESASYSKDRPSAMK-GNKNAE 325
Query: 284 GKAGR---SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G+ + S V IACGGRHS VVTD+GALL FGWGLYGQ
Sbjct: 326 GQINKVMGSRVTAIACGGRHSVVVTDSGALLAFGWGLYGQ 365
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 112/273 (41%), Gaps = 56/273 (20%)
Query: 77 SADDEGQSYLTSGKHGETPEP--FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW---- 130
S+ +G TSG + P T + AAG H +++++ G+V+ WG+
Sbjct: 226 SSAKQGNDSSTSGDENLSAPPCVVTFNTGVKITAVAAGGRHTLALSDFGQVWGWGYGGEG 285
Query: 131 ----------------RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
C+ SA ++D SA K++ G+ + + +
Sbjct: 286 QLGLGSRIRTVSSPHTIPCIESASYSKDRPSAMKGNKNAEGQINKVMGSRVTAIACGGRH 345
Query: 175 EVVKRRKTSSAREESE------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
VV T S + G+ LSP V+ GVK+ VAAG HT+ +S
Sbjct: 346 SVVV---TDSGALLAFGWGLYGQCGQGNTDDVLSPTCVSAILGVKMQDVAAGLWHTVSIS 402
Query: 229 DMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAG 287
G V+ +G GQLG+GS + + +P P LE+ K
Sbjct: 403 ADGDVYSFGGNQFGQLGIGSDQAETIPKLVDAPSLEN--------------------KNA 442
Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
RS ++CG RHSA++TD G + +GW YGQ
Sbjct: 443 RS----VSCGARHSAIITDEGEVFCWGWNKYGQ 471
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 5/46 (10%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
V+ G RH+ I++D G+V+ WG+ GQLGLG + +PC+
Sbjct: 445 VSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMD-----RNVPCI 485
>gi|357125846|ref|XP_003564600.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like isoform
1 [Brachypodium distachyon]
Length = 499
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/325 (57%), Positives = 231/325 (71%), Gaps = 25/325 (7%)
Query: 18 KETVVYMWGYLPGTSPEKSPILSPIPARL---CGGDSWKDVCGGGCGFALATSESGKLIT 74
KE VV MWGYLPG SP++SP+L+P+P RL GD+W+DVCGGGCGFA+A SESGKL+T
Sbjct: 32 KEQVVLMWGYLPGVSPQRSPLLAPVPVRLPLAATGDAWRDVCGGGCGFAMAISESGKLLT 91
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
WGS DD GQSY+T+GKH ETPE FPLP++ + +A GWAHCV++TE G VYTWGW+ECV
Sbjct: 92 WGSTDDMGQSYVTAGKHEETPEAFPLPSDVVIARADTGWAHCVAITEEGVVYTWGWKECV 151
Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP----------------PSDKRAGEEVVK 178
P+ V D S G+ ++D + QSA + Q PS+ R EE K
Sbjct: 152 PTGTVIADQSSVGTLERDES--QSASASNQVSPRSHVSSRTSSGAASGPSESRGAEESTK 209
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
RR+ SSA++ ++ S DE + PC+VT N GVKIT VAAGGRHTL LSD GQVWGWGY
Sbjct: 210 RRRLSSAKQGPDSSTSSDENLSAPPCIVTFNTGVKITAVAAGGRHTLALSDFGQVWGWGY 269
Query: 239 GGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR---SYVKEIA 295
GGEGQLGLGSRI+ V +PH IPC+E A GKDRP ++ G+ N+ + + + VK IA
Sbjct: 270 GGEGQLGLGSRIRTVSSPHPIPCIESALYGKDRPAAMK-GNKNAETQISKVMGNCVKAIA 328
Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQ 320
CGGRHS VVTD+G LLTFGWGLYGQ
Sbjct: 329 CGGRHSVVVTDSGTLLTFGWGLYGQ 353
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 58/127 (45%), Gaps = 25/127 (19%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMV 253
G+ LSP V+ GVK+ AAG HT+ +S G V+ +G GQLG GS + V
Sbjct: 357 GNTDDVLSPTCVSSILGVKMEGAAAGLWHTVCISVDGDVYSFGGNQFGQLGTGSDEAETV 416
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
P CLE+ + + ++CG RHSA++TD + +
Sbjct: 417 PKLVDASCLENKNA------------------------RTVSCGARHSAIITDESEVFCW 452
Query: 314 GWGLYGQ 320
GW YGQ
Sbjct: 453 GWNKYGQ 459
>gi|357125848|ref|XP_003564601.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like isoform
2 [Brachypodium distachyon]
Length = 518
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/344 (54%), Positives = 231/344 (67%), Gaps = 44/344 (12%)
Query: 18 KETVVYMWGYLPGTSPEKSPILSPIPARL---CGGDSWKDVCGGGCGFALATSESGKLIT 74
KE VV MWGYLPG SP++SP+L+P+P RL GD+W+DVCGGGCGFA+A SESGKL+T
Sbjct: 32 KEQVVLMWGYLPGVSPQRSPLLAPVPVRLPLAATGDAWRDVCGGGCGFAMAISESGKLLT 91
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
WGS DD GQSY+T+GKH ETPE FPLP++ + +A GWAHCV++TE G VYTWGW+ECV
Sbjct: 92 WGSTDDMGQSYVTAGKHEETPEAFPLPSDVVIARADTGWAHCVAITEEGVVYTWGWKECV 151
Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP---------------------------- 166
P+ V D S G+ ++D + QSA + Q
Sbjct: 152 PTGTVIADQSSVGTLERDES--QSASASNQGESFSALILYRYNKGNSIAVSPRSHVSSRT 209
Query: 167 -------PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
PS+ R EE KRR+ SSA++ ++ S DE + PC+VT N GVKIT VAA
Sbjct: 210 SSGAASGPSESRGAEESTKRRRLSSAKQGPDSSTSSDENLSAPPCIVTFNTGVKITAVAA 269
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
GGRHTL LSD GQVWGWGYGGEGQLGLGSRI+ V +PH IPC+E A GKDRP ++ G+
Sbjct: 270 GGRHTLALSDFGQVWGWGYGGEGQLGLGSRIRTVSSPHPIPCIESALYGKDRPAAMK-GN 328
Query: 280 VNSSGKAGR---SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
N+ + + + VK IACGGRHS VVTD+G LLTFGWGLYGQ
Sbjct: 329 KNAETQISKVMGNCVKAIACGGRHSVVVTDSGTLLTFGWGLYGQ 372
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 58/127 (45%), Gaps = 25/127 (19%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMV 253
G+ LSP V+ GVK+ AAG HT+ +S G V+ +G GQLG GS + V
Sbjct: 376 GNTDDVLSPTCVSSILGVKMEGAAAGLWHTVCISVDGDVYSFGGNQFGQLGTGSDEAETV 435
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
P CLE+ + + ++CG RHSA++TD + +
Sbjct: 436 PKLVDASCLENKNA------------------------RTVSCGARHSAIITDESEVFCW 471
Query: 314 GWGLYGQ 320
GW YGQ
Sbjct: 472 GWNKYGQ 478
>gi|413951960|gb|AFW84609.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 552
Score = 360 bits (925), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 186/327 (56%), Positives = 231/327 (70%), Gaps = 27/327 (8%)
Query: 18 KETVVYMWGYLPGTSPEKSPILSPIPARL------CGGDSWKDVCGGGCGFALATSESGK 71
KE VV MWGYLPG SP++SP+L P+P RL GD W+DVCGGGCGFA+A SESGK
Sbjct: 119 KERVVLMWGYLPGVSPQRSPLLGPVPVRLPPTAATAAGDGWRDVCGGGCGFAMAISESGK 178
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
L+TWGSADD GQSY+T+GKH ETPE FPLP+ +V+A AGWAHCV++T+ +VYTWGW+
Sbjct: 179 LLTWGSADDMGQSYVTAGKHEETPEAFPLPSSVVIVRADAGWAHCVAITDEYDVYTWGWK 238
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP---------------SDKRAGEEV 176
ECVP+ +V D S G+ +KD +Q A+ T+Q P S+ R ++
Sbjct: 239 ECVPTGRVIGDQSSVGTMEKDE--RQMAMATDQVSPRSQVSRTSSGAAAGSSESRGTDDS 296
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
KRRK S A+ E+ S DE + PC+VT + GVKI VAAGGRHTL LSD+GQVWGW
Sbjct: 297 TKRRKLSLAKHGPESSTSSDESLSAPPCVVTFSTGVKIVAVAAGGRHTLALSDLGQVWGW 356
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR---SYVKE 293
GYGGEGQLGLGSRI+ V +PH +PC+E A KDRP ++ G+ + G + + V+
Sbjct: 357 GYGGEGQLGLGSRIRTVSSPHPVPCIESALYTKDRPSAMK-GNKAAEGHVSKVLGNCVRA 415
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQ 320
IACGGRHSAVVTD+GALLTFGWGLYGQ
Sbjct: 416 IACGGRHSAVVTDSGALLTFGWGLYGQ 442
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 59/126 (46%), Gaps = 23/126 (18%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G+ LSP V+ G+K+ VAAG HT+ S G V+ +G GQLG GS
Sbjct: 446 GNTDDVLSPTCVSSILGIKMQDVAAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSD----- 500
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
+P L A S +++ + ++CG RHSA++TD G + +G
Sbjct: 501 QAETLPKLVDATSLENK------------------NARSVSCGARHSAIITDEGEVFCWG 542
Query: 315 WGLYGQ 320
W YGQ
Sbjct: 543 WNKYGQ 548
>gi|413951961|gb|AFW84610.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 588
Score = 360 bits (924), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 186/327 (56%), Positives = 231/327 (70%), Gaps = 27/327 (8%)
Query: 18 KETVVYMWGYLPGTSPEKSPILSPIPARL------CGGDSWKDVCGGGCGFALATSESGK 71
KE VV MWGYLPG SP++SP+L P+P RL GD W+DVCGGGCGFA+A SESGK
Sbjct: 119 KERVVLMWGYLPGVSPQRSPLLGPVPVRLPPTAATAAGDGWRDVCGGGCGFAMAISESGK 178
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
L+TWGSADD GQSY+T+GKH ETPE FPLP+ +V+A AGWAHCV++T+ +VYTWGW+
Sbjct: 179 LLTWGSADDMGQSYVTAGKHEETPEAFPLPSSVVIVRADAGWAHCVAITDEYDVYTWGWK 238
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP---------------SDKRAGEEV 176
ECVP+ +V D S G+ +KD +Q A+ T+Q P S+ R ++
Sbjct: 239 ECVPTGRVIGDQSSVGTMEKDE--RQMAMATDQVSPRSQVSRTSSGAAAGSSESRGTDDS 296
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
KRRK S A+ E+ S DE + PC+VT + GVKI VAAGGRHTL LSD+GQVWGW
Sbjct: 297 TKRRKLSLAKHGPESSTSSDESLSAPPCVVTFSTGVKIVAVAAGGRHTLALSDLGQVWGW 356
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR---SYVKE 293
GYGGEGQLGLGSRI+ V +PH +PC+E A KDRP ++ G+ + G + + V+
Sbjct: 357 GYGGEGQLGLGSRIRTVSSPHPVPCIESALYTKDRPSAMK-GNKAAEGHVSKVLGNCVRA 415
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQ 320
IACGGRHSAVVTD+GALLTFGWGLYGQ
Sbjct: 416 IACGGRHSAVVTDSGALLTFGWGLYGQ 442
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 108/280 (38%), Gaps = 58/280 (20%)
Query: 76 GSADDEGQSYLTSGKHG------------ETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
G+ D + L+ KHG P T +V AAG H +++++ G
Sbjct: 292 GTDDSTKRRKLSLAKHGPESSTSSDESLSAPPCVVTFSTGVKIVAVAAGGRHTLALSDLG 351
Query: 124 EVYTWGW--------------------RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
+V+ WG+ C+ SA T+D SA K + G S +
Sbjct: 352 QVWGWGYGGEGQLGLGSRIRTVSSPHPVPCIESALYTKDRPSAMKGNKAAEGHVSKVLGN 411
Query: 164 --QAPPSDKRAGEEVVKR-RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
+A R V + G+ LSP V+ G+K+ VAAG
Sbjct: 412 CVRAIACGGRHSAVVTDSGALLTFGWGLYGQCGQGNTDDVLSPTCVSSILGIKMQDVAAG 471
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
HT+ S G V+ +G GQLG GS + P LV S+
Sbjct: 472 LWHTVCTSVDGDVYSFGGNQFGQLGTGSD-----------------QAETLPKLVDATSL 514
Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ K RS ++CG RHSA++TD G + +GW YGQ
Sbjct: 515 EN--KNARS----VSCGARHSAIITDEGEVFCWGWNKYGQ 548
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVP 254
V+ G RH+ I++D G+V+ WG+ GQLGLG + + VP
Sbjct: 522 VSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVP 560
>gi|110740523|dbj|BAE98367.1| regulator of chromosome condensation-like protein [Arabidopsis
thaliana]
Length = 488
Score = 360 bits (924), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 183/319 (57%), Positives = 224/319 (70%), Gaps = 23/319 (7%)
Query: 19 ETVVYMWGYLPGTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSESGKLITWG 76
+ VVYMWGYLPG SP++SP++SP+ ++ SWKDV GGGCGFA+AT+ESGKLITWG
Sbjct: 30 QRVVYMWGYLPGASPQRSPLMSPVEVKIPPAVESSWKDVSGGGCGFAMATAESGKLITWG 89
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
S DD GQSY+TSGKHGETPEPFPLP E V KA AGWAHCV+VTE +VYTWGWREC+P+
Sbjct: 90 STDDLGQSYVTSGKHGETPEPFPLPPEVCVQKAEAGWAHCVAVTENQQVYTWGWRECIPT 149
Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQ--------------APPSDKRAGEEVVKRRKT 182
+V R DS + + TEQ + + R G E K+R+
Sbjct: 150 GRVFRQV------DGDSCERNISFSTEQVSSSSQGKKSSGGTSSQVEGRGGGEPTKKRRI 203
Query: 183 SSAREESENPASGDEF-FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
S +++ +EN + D + PCLV+L PGV+I VAAGGRHTL LSD+GQVWGWGYGGE
Sbjct: 204 SPSKQAAENSSQSDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGE 263
Query: 242 GQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
GQLGLGSR+++V +PH IPC+E ++ GK V SV G+ SYVK+IACGGRHS
Sbjct: 264 GQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHS 323
Query: 302 AVVTDAGALLTFGWGLYGQ 320
AV+TD GALLTFGWGLYGQ
Sbjct: 324 AVITDTGALLTFGWGLYGQ 342
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 59/121 (48%), Gaps = 25/121 (20%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLI 259
LSP V+ G++I +VAAG HT S G V+ +G GQLG G + + +P
Sbjct: 352 LSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEA 411
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
P LE+ VN VK I+CG RH+AV+TD G + +GW YG
Sbjct: 412 PNLEN---------------VN---------VKTISCGARHTAVITDEGRVFCWGWNKYG 447
Query: 320 Q 320
Q
Sbjct: 448 Q 448
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 65/157 (41%), Gaps = 26/157 (16%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
V K A G H +T+ G + T+GW G G + ST + + PT +
Sbjct: 313 VKKIACGGRHSAVITDTGALLTFGW-------------GLYGQCGQGSTDDELS-PTCVS 358
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASG-----------DEFFTLSPCLVTLN-PGVK 213
R E T+ A + + A G D+ TL L N V
Sbjct: 359 SLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVN 418
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
+ ++ G RHT +++D G+V+ WG+ GQLG+G I
Sbjct: 419 VKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVI 455
>gi|242054967|ref|XP_002456629.1| hypothetical protein SORBIDRAFT_03g039710 [Sorghum bicolor]
gi|241928604|gb|EES01749.1| hypothetical protein SORBIDRAFT_03g039710 [Sorghum bicolor]
Length = 503
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 187/329 (56%), Positives = 233/329 (70%), Gaps = 29/329 (8%)
Query: 18 KETVVYMWGYLPGTSPEKSPILSPIPARL------CGGDSWKDVCGGGCGFALATSESGK 71
KE VV MWGYLPG SP++SP+L P+P RL GD W+DVCGGGCGFA+A SESGK
Sbjct: 32 KERVVLMWGYLPGVSPQRSPLLGPVPVRLPPAAAAAAGDGWRDVCGGGCGFAMAISESGK 91
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
L+TWGSADD GQSY+T+GKH ETPE FPLP+ ++V+A AGWAHCV++T+ G+VYTWGW+
Sbjct: 92 LLTWGSADDMGQSYVTAGKHEETPEAFPLPSGVAIVRADAGWAHCVAITDEGDVYTWGWK 151
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS---------------DKRAGEEV 176
ECVP+ +V D S G+ +KD +Q A+ T+Q P + R ++
Sbjct: 152 ECVPTGRVIGDQSSVGTMEKDE--RQMAMATDQVSPRSQVSRTSSGAASGPPESRGTDDS 209
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL--SDMGQVW 234
KRR+ SSA+ E+ S DE + PC+VT N GVKI VAAGGRHTL L SD+GQVW
Sbjct: 210 TKRRRLSSAKHGPESSTSSDESLSAPPCVVTFNTGVKIVSVAAGGRHTLALSASDLGQVW 269
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR---SYV 291
GWGYGGEGQLGLGSRI+ V +PH +PC+E A KDRP ++ G+ + G + + V
Sbjct: 270 GWGYGGEGQLGLGSRIRTVSSPHPVPCIESALYSKDRPSAMK-GNKAAEGHVSKVLGNCV 328
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ IACGGRHSAVVTD+GALLTFGWGLYGQ
Sbjct: 329 RAIACGGRHSAVVTDSGALLTFGWGLYGQ 357
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 59/126 (46%), Gaps = 23/126 (18%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G+ LSP V+ G+K+ VAAG HT+ S G V+ +G GQLG GS
Sbjct: 361 GNTDDVLSPTCVSSILGIKMQDVAAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSD----- 415
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
+P L A S +++ + ++CG RHSA++TD G + +G
Sbjct: 416 QAETVPKLVDATSLENK------------------NARSVSCGARHSAIITDEGEVFCWG 457
Query: 315 WGLYGQ 320
W YGQ
Sbjct: 458 WNKYGQ 463
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVP 254
V+ G RH+ I++D G+V+ WG+ GQLGLG + + VP
Sbjct: 437 VSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVP 475
>gi|15233306|ref|NP_191117.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|7076801|emb|CAB75916.1| Regulator of chromosome condensation-like protein [Arabidopsis
thaliana]
gi|332645883|gb|AEE79404.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 488
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 183/319 (57%), Positives = 224/319 (70%), Gaps = 23/319 (7%)
Query: 19 ETVVYMWGYLPGTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSESGKLITWG 76
+ VVYMWGYLPG SP++SP++SP+ ++ SWKDV GGGCGFA+AT+ESGKLITWG
Sbjct: 30 QRVVYMWGYLPGASPQRSPLMSPVEVKIPPAVESSWKDVSGGGCGFAMATAESGKLITWG 89
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
S DD GQSY+TSGKHGETPEPFPLP E V KA AGWAHCV+VTE +VYTWGWREC+P+
Sbjct: 90 STDDLGQSYVTSGKHGETPEPFPLPPEVCVQKAEAGWAHCVAVTENQQVYTWGWRECIPT 149
Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQ--------------APPSDKRAGEEVVKRRKT 182
+V G DS + + TEQ + + R G E K+R+
Sbjct: 150 GRVF------GQVDGDSCERNISFSTEQVSSSSQGKKSSGGTSSQVEGRGGGEPTKKRRI 203
Query: 183 SSAREESENPASGDEF-FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
S +++ +EN + D + PCLV+L PGV+I VAAGGRHTL LSD+GQVWGWGYGGE
Sbjct: 204 SPSKQAAENSSQSDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGE 263
Query: 242 GQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
GQLGLGSR+++V +PH IPC+E ++ GK V SV G+ SYVK+IACGGRHS
Sbjct: 264 GQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHS 323
Query: 302 AVVTDAGALLTFGWGLYGQ 320
AV+TD GALLTFGWGLYGQ
Sbjct: 324 AVITDTGALLTFGWGLYGQ 342
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 59/121 (48%), Gaps = 25/121 (20%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLI 259
LSP V+ G++I +VAAG HT S G V+ +G GQLG G + + +P
Sbjct: 352 LSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEA 411
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
P LE+ VN VK I+CG RH+AV+TD G + +GW YG
Sbjct: 412 PNLEN---------------VN---------VKTISCGARHTAVITDEGRVFCWGWNKYG 447
Query: 320 Q 320
Q
Sbjct: 448 Q 448
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 65/157 (41%), Gaps = 26/157 (16%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
V K A G H +T+ G + T+GW G G + ST + + PT +
Sbjct: 313 VKKIACGGRHSAVITDTGALLTFGW-------------GLYGQCGQGSTDDELS-PTCVS 358
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASG-----------DEFFTLSPCLVTLN-PGVK 213
R E T+ A + + A G D+ TL L N V
Sbjct: 359 SLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVN 418
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
+ ++ G RHT +++D G+V+ WG+ GQLG+G I
Sbjct: 419 VKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVI 455
>gi|222631832|gb|EEE63964.1| hypothetical protein OsJ_18789 [Oryza sativa Japonica Group]
Length = 479
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 183/325 (56%), Positives = 228/325 (70%), Gaps = 25/325 (7%)
Query: 18 KETVVYMWGYLPGTSPEKSPILSPIPARL-----CGGDSWKDVCGGGCGFALATSESGKL 72
KE VV MWGYLPG S ++SP+L P+P R+ GD+W+DV GGGCGFA+A SE GKL
Sbjct: 12 KERVVLMWGYLPGVSQQRSPLLGPVPVRMPDAAAAAGDAWRDVAGGGCGFAMAVSEQGKL 71
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
TWGS DD GQSY+T+GKH ETPE FPLP++ ++V+A AGWAHCV++T G+VYTWGW+E
Sbjct: 72 FTWGSTDDMGQSYVTAGKHEETPEAFPLPSDIAIVRADAGWAHCVAITGKGDVYTWGWKE 131
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK---------------RAGEEVV 177
CVP+ +V D + G+ D +QS + T+Q P K R+ E+
Sbjct: 132 CVPTGRVIADHSATGAMDCDK--RQSGVATDQVSPRSKVSRTSTKAASGPAESRSSEDST 189
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
KRR+ SS++ +E+ +S DE + PC+VT N GVKI +VAAGGRHTL+LSD GQVWGWG
Sbjct: 190 KRRRLSSSKHGAESESSSDENLSAPPCVVTFNTGVKIVEVAAGGRHTLVLSDFGQVWGWG 249
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY--VKEIA 295
YGGEGQLGLGSRI+ V +PH IPC++ A KDR +V GS G R+ VK IA
Sbjct: 250 YGGEGQLGLGSRIRTVSSPHPIPCVQSAFYSKDRTGIV-MGSRTLEGTNDRAATCVKAIA 308
Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQ 320
CGGRHSAVVTD+G LLTFGWGLYGQ
Sbjct: 309 CGGRHSAVVTDSGTLLTFGWGLYGQ 333
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 108/278 (38%), Gaps = 57/278 (20%)
Query: 77 SADDEGQSYLTSGKHGETPEP------------FPLPTEASVVKAAAGWAHCVSVTEAGE 124
S D + L+S KHG E T +V+ AAG H + +++ G+
Sbjct: 185 SEDSTKRRRLSSSKHGAESESSSDENLSAPPCVVTFNTGVKIVEVAAGGRHTLVLSDFGQ 244
Query: 125 VYTWGW--------------------RECVPSAKVTRDFGS--AGSFQKDSTGKQSALPT 162
V+ WG+ CV SA ++D GS + T ++A
Sbjct: 245 VWGWGYGGEGQLGLGSRIRTVSSPHPIPCVQSAFYSKDRTGIVMGSRTLEGTNDRAATCV 304
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
+ + + + G+ LSP V+ GVKI +VAAG
Sbjct: 305 KAIACGGRHSAVVTDSGTLLTFGWGLYGQCGQGNTDDILSPTCVSAIMGVKIQRVAAGLW 364
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
HT+ S G V+ +G GQLG GS ++P L A+
Sbjct: 365 HTVCTSADGDVYSFGGNQFGQLGTGS-----DQAEIVPKLVEAS---------------- 403
Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
K ++ + ++CG RHSAV+TD G + +GW YGQ
Sbjct: 404 --KLENNHARGVSCGARHSAVITDKGDVFCWGWNKYGQ 439
Score = 37.7 bits (86), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
V+ G RH+ +++D G V+ WG+ GQLGLG T +PC
Sbjct: 413 VSCGARHSAVITDKGDVFCWGWNKYGQLGLGD-----STDRNVPC 452
>gi|357460953|ref|XP_003600758.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355489806|gb|AES71009.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 334
Score = 357 bits (916), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 185/327 (56%), Positives = 228/327 (69%), Gaps = 43/327 (13%)
Query: 16 ECKETVVYMWGYLPGTSPEKSPILSPIPARL---CGGDSWKDVCGGGCGFALATSESGKL 72
E KE +VYMWGYLPG P+++P+L+P+ R+ GG +WKDV GGGCGFA+A SESGKL
Sbjct: 7 EVKEKMVYMWGYLPGALPQRTPLLTPVLVRVPATSGGYNWKDVSGGGCGFAMAISESGKL 66
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
ITWGS DD GQSY+TSGKHGETPEPF LP E S+VKAA+ WAHCV+ T+ GEVYTWGW+E
Sbjct: 67 ITWGSTDDLGQSYVTSGKHGETPEPFSLPNEVSIVKAASAWAHCVAATDCGEVYTWGWKE 126
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA------------PPSD----------- 169
C+PS KV + S +KD+ GK S+ TEQ PSD
Sbjct: 127 CIPSGKVFGETSQGVSPEKDAQGKPSSFLTEQGMSNLFSMDICLQIPSDFATVSSRSQVS 186
Query: 170 ------KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+GEE KRRK SSA++ ++ +SGD+ T PCLVTLNPGVKIT VAAGGRH
Sbjct: 187 KSTGGTVSSGEESSKRRKVSSAKQAAQTSSSGDDILTAMPCLVTLNPGVKITSVAAGGRH 246
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
TL+LSD+GQVWGWGYGGEGQLGLGSR++MV +PH+IPC++ ++ + QGS++S
Sbjct: 247 TLVLSDIGQVWGWGYGGEGQLGLGSRVRMVSSPHIIPCIDSSS--------LVQGSMSSE 298
Query: 284 GKAGR---SYVKEIACGGRHSAVVTDA 307
G R S +K IACGGRHSAV+T A
Sbjct: 299 GHNFRIPGSCIKAIACGGRHSAVITGA 325
>gi|218196915|gb|EEC79342.1| hypothetical protein OsI_20201 [Oryza sativa Indica Group]
Length = 484
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 182/330 (55%), Positives = 230/330 (69%), Gaps = 30/330 (9%)
Query: 18 KETVVYMWGYLPGTSPEKSPILSPIPARL-----CGGDSWKDVCGGGCGFALATSESGKL 72
KE VV MWGYLPG S ++SP+L P+P R+ GD+W+DV GGGCGFA+A SE GKL
Sbjct: 12 KERVVLMWGYLPGVSQQRSPLLGPVPVRMPDAAAAAGDAWRDVAGGGCGFAMAVSEQGKL 71
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
TWGS DD GQSY+T+GKH ETPE FPLP++ ++V+A AGWAHCV++T G+VYTWGW+E
Sbjct: 72 FTWGSTDDMGQSYVTAGKHEETPEAFPLPSDIAIVRADAGWAHCVAITGKGDVYTWGWKE 131
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ--------------------APPSDKRA 172
CVP+ +V D + G+ D +QS + T+Q + P++ R+
Sbjct: 132 CVPTGRVIADHSATGAMDCDK--RQSGVATDQGNSITVSPRSKVSRTSTKAASGPAESRS 189
Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
E+ KRR+ SS++ +E+ +S DE + PC+VT N GVKI +VAAGGRHTL+LSD GQ
Sbjct: 190 SEDSTKRRRLSSSKHGAESESSSDENLSAPPCVVTFNTGVKIVEVAAGGRHTLVLSDFGQ 249
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-- 290
VWGWGYGGEGQLGLGSRI+ V +PH IPC++ A KDR +V GS G R+
Sbjct: 250 VWGWGYGGEGQLGLGSRIRTVSSPHPIPCVQSAFYSKDRTGIV-MGSRTLEGTNDRAATC 308
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
VK IACGGRHSAVVTD+G LLTFGWGLYGQ
Sbjct: 309 VKAIACGGRHSAVVTDSGTLLTFGWGLYGQ 338
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 109/278 (39%), Gaps = 57/278 (20%)
Query: 77 SADDEGQSYLTSGKHGETPEP------------FPLPTEASVVKAAAGWAHCVSVTEAGE 124
S D + L+S KHG E T +V+ AAG H + +++ G+
Sbjct: 190 SEDSTKRRRLSSSKHGAESESSSDENLSAPPCVVTFNTGVKIVEVAAGGRHTLVLSDFGQ 249
Query: 125 VYTWGW--------------------RECVPSAKVTRDFGS--AGSFQKDSTGKQSALPT 162
V+ WG+ CV SA ++D GS + T ++A
Sbjct: 250 VWGWGYGGEGQLGLGSRIRTVSSPHPIPCVQSAFYSKDRTGIVMGSRTLEGTNDRAATCV 309
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
+ + + + G+ LSP V+ GVKI +VAAG
Sbjct: 310 KAIACGGRHSAVVTDSGTLLTFGWGLYGQCGQGNTDDILSPTCVSAIMGVKIQRVAAGLW 369
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
HT+ S G V+ +G GQLG GS ++P L A+ +++
Sbjct: 370 HTVCTSADGDVYSFGGNQFGQLGTGS-----DQAEIVPKLVEASKLENK----------- 413
Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ + ++CG RHSAV+TD G + +GW YGQ
Sbjct: 414 -------HARGVSCGARHSAVITDKGDVFCWGWNKYGQ 444
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
V+ G RH+ +++D G V+ WG+ GQLGLG T +PC
Sbjct: 418 VSCGARHSAVITDKGDVFCWGWNKYGQLGLGD-----STDRNVPC 457
>gi|297816858|ref|XP_002876312.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297322150|gb|EFH52571.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 482
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 184/325 (56%), Positives = 226/325 (69%), Gaps = 21/325 (6%)
Query: 11 NEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSE 68
E+ E + +VYMWGYLPG S ++SP++SP+ ++ SWKDV GGGCGFA+AT+E
Sbjct: 18 QEEEEVVGQRLVYMWGYLPGASQQRSPLMSPVEVKIPPAVESSWKDVSGGGCGFAMATAE 77
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
SGKLITWGS DD GQSY+TSGKHGETPEPFPLP E V KA AGWAHCV+VTE EVYTW
Sbjct: 78 SGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPPEVCVQKAEAGWAHCVAVTENQEVYTW 137
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK------------RAGEEV 176
GWREC+P+ +V FG A DS + + TEQ P+ + A E
Sbjct: 138 GWRECIPTGRV---FGQA---DGDSCERNISFSTEQVSPTCQGRKSSGGTSYQVEARGEP 191
Query: 177 VKRRKTSSAREESENPASGDEF-FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
K+R+ S +++ +EN + D + PCLV+L PGV+I VAAGGRHTL LSD+GQVWG
Sbjct: 192 TKKRRISPSKQAAENASQSDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWG 251
Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
WGYGGEGQLGLGSR+++V +PH IPC+E ++ GK V S + SYVK+IA
Sbjct: 252 WGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGVNMSSEVQCARVLGSYVKKIA 311
Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQ 320
CGGRHSAV+TD GALLTFGWGLYGQ
Sbjct: 312 CGGRHSAVITDTGALLTFGWGLYGQ 336
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 59/121 (48%), Gaps = 25/121 (20%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLI 259
LSP V+ G++I +VAAG HT+ S G V+ +G GQLG G + + +P
Sbjct: 346 LSPTCVSSLLGIRIEEVAAGLWHTICASADGDVYSFGGNQFGQLGTGCDQAETLPKLLEA 405
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
P LE+ VN VK I+CG RH+AV+ D G + +GW YG
Sbjct: 406 PNLEN---------------VN---------VKIISCGARHTAVIADEGKVFCWGWNKYG 441
Query: 320 Q 320
Q
Sbjct: 442 Q 442
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 196 DEFFTLSPCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
D+ TL L N V + ++ G RHT +++D G+V+ WG+ GQLGLG I
Sbjct: 394 DQAETLPKLLEAPNLENVNVKIISCGARHTAVIADEGKVFCWGWNKYGQLGLGDVI 449
>gi|222619534|gb|EEE55666.1| hypothetical protein OsJ_04066 [Oryza sativa Japonica Group]
Length = 418
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 157/275 (57%), Positives = 193/275 (70%), Gaps = 21/275 (7%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
+A SESGKL+TWGSADD GQSY+T+GKH ETPE FPLP++ ++V+A AGWAHCV++T+ G
Sbjct: 1 MAISESGKLLTWGSADDMGQSYVTAGKHEETPEAFPLPSDVAIVRADAGWAHCVAITDEG 60
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP---------------S 168
+VYTWGW+ECVP+ +V D S G+ +KD +QSA+ +Q P S
Sbjct: 61 DVYTWGWKECVPTGRVISDQSSGGTLEKDE--RQSAIAADQVSPRSQVSRTSSGAASGPS 118
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ R ++ KRR+ SS + E+ S DE + PC+VT N GVKI VAAGGRHTL LS
Sbjct: 119 ESRGTDDSTKRRRLSSTKHAPESSTSSDENLSAPPCVVTFNTGVKIMAVAAGGRHTLALS 178
Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV---RQGSVNSSGK 285
D+GQVWGWGYGGEGQLGLGSRI+ V +PH IPC+E A KDRP + + V S
Sbjct: 179 DLGQVWGWGYGGEGQLGLGSRIRTVSSPHPIPCIESALYSKDRPAAMKGNKSAEVQISKV 238
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G VK IACGGRHSAVVTD+GALLTFGWGLYGQ
Sbjct: 239 MGNC-VKAIACGGRHSAVVTDSGALLTFGWGLYGQ 272
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 23/126 (18%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G+ LSP V+ GVK+ + AG HT+ S G V+ +G GQLG GS
Sbjct: 276 GNTDDVLSPTCVSSILGVKMQDIGAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSD----- 330
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
+P L A+S +++ + ++CG RHSA++TD G + +G
Sbjct: 331 QAETVPKLVDASSLENK------------------NARAVSCGARHSAIITDEGEVFCWG 372
Query: 315 WGLYGQ 320
W YGQ
Sbjct: 373 WNKYGQ 378
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVP 254
V+ G RH+ I++D G+V+ WG+ GQLGLG + + VP
Sbjct: 352 VSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVP 390
>gi|218189368|gb|EEC71795.1| hypothetical protein OsI_04422 [Oryza sativa Indica Group]
Length = 427
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 157/280 (56%), Positives = 196/280 (70%), Gaps = 25/280 (8%)
Query: 61 GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
G+ A ++SGKL+TWGSADD GQSY+T+GKH ETPE FPLP++ ++V+A AGWAHCV++T
Sbjct: 7 GWLAAAAQSGKLLTWGSADDMGQSYVTAGKHEETPEAFPLPSDVAIVRADAGWAHCVAIT 66
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP------------- 167
+ G+VYTWGW+ECVP+ +V D S G+ +KD +QSA+ +Q P
Sbjct: 67 DEGDVYTWGWKECVPTGRVISDQSSGGTLEKDE--RQSAIAADQVSPRSQVSRTSSGAAS 124
Query: 168 --SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
S+ R ++ KRR+ SS + E+ S DE + PC+VT N GVKI VAAGGRHTL
Sbjct: 125 GPSESRGTDDSTKRRRLSSTKHAPESSTSSDENLSAPPCVVTFNTGVKIMAVAAGGRHTL 184
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
LSD+GQVWGWGYGGEGQLGLGSRI+ V +PH IPC+E A KDRP ++ N S +
Sbjct: 185 ALSDLGQVWGWGYGGEGQLGLGSRIRTVSSPHPIPCIESALYSKDRPAAMKG---NKSAE 241
Query: 286 AGRSY-----VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
A S VK IACGGRHSAVVTD+GALLTFGWGLYGQ
Sbjct: 242 AQISKVMGNCVKAIACGGRHSAVVTDSGALLTFGWGLYGQ 281
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 23/126 (18%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G+ LSP V+ GVK+ + AG HT+ S G V+ +G GQLG GS
Sbjct: 285 GNTDDVLSPTCVSSILGVKMQDIGAGLWHTVCTSVDGDVYSFGGNQFGQLGTGS-----D 339
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
+P L A+S +++ + ++CG RHSA++TD G + +G
Sbjct: 340 QAETVPKLVDASSLENK------------------NARAVSCGARHSAIITDEGEVFCWG 381
Query: 315 WGLYGQ 320
W YGQ
Sbjct: 382 WNKYGQ 387
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVP 254
V+ G RH+ I++D G+V+ WG+ GQLGLG + + VP
Sbjct: 361 VSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVP 399
>gi|168016500|ref|XP_001760787.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688147|gb|EDQ74526.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 445
Score = 300 bits (768), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 162/310 (52%), Positives = 200/310 (64%), Gaps = 24/310 (7%)
Query: 24 MWGYLPGTSPEKSPILSPIPARLCG-GDSWKDVCGGGCGFALATSESGKLITWGSADDEG 82
MWGYLP SP+++P+L P P + D K VC GGCGF +A SESGKL TWGS + G
Sbjct: 1 MWGYLPAASPQRAPLLQPTPVPVTPLNDPLKTVCNGGCGFGIAISESGKLNTWGSTTELG 60
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
Q YL SGK E PEP+PLPTE+ +V+AA GWAHC +VT GEV+TWGW ECVPS + T D
Sbjct: 61 QCYLISGKQQELPEPYPLPTESPIVQAAGGWAHCAAVTGGGEVFTWGWSECVPSIQPTPD 120
Query: 143 FGSAGSFQKDSTGKQSALPTEQ---APPSDKRAGEEVVKRRKTSSAR--EESENPASGDE 197
S KQS T + +D + EE++K+RK S E E+P + +E
Sbjct: 121 ESEQVQGDDASACKQSGRQTHRNLTCKTTDSKGAEEILKKRKIVSFEHGESPESPTAAEE 180
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSD------MGQVWGWGYGGEGQLGLGSRIK 251
PCLV L+PG++I+ VAAGGRHTL LS +G VWGWGYGGEGQLGLG+R++
Sbjct: 181 NVFAPPCLVNLDPGIRISIVAAGGRHTLALSGEFSFKYVGHVWGWGYGGEGQLGLGTRMR 240
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK-AGRSYVKEIACGGRHSAVVTDAGAL 310
+V +P LIPC +G ++SSG S +K IACGGRHSA+VTDAGAL
Sbjct: 241 IVSSPQLIPCFNSPENG-----------ISSSGAPIPGSSIKAIACGGRHSAIVTDAGAL 289
Query: 311 LTFGWGLYGQ 320
LTFGWGLYGQ
Sbjct: 290 LTFGWGLYGQ 299
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 23/120 (19%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
LSPCLV+ G+++T +AAG HTL ++D+G V+ +G GQLG+G + +P LI
Sbjct: 309 LSPCLVSAMGGLQVTGIAAGLWHTLCITDIGDVYAFGGNQFGQLGVGGNSAEM-SPRLI- 366
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
D PLL + V +ACG RHS V+T +G + +GW YGQ
Sbjct: 367 ---------DAPLLEDESCV------------AVACGARHSVVLTGSGKIFAWGWNKYGQ 405
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 25/85 (29%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
VA G RH+++L+ G+++ WG+ GQLGLG + +D P+ V
Sbjct: 379 VACGARHSVVLTGSGKIFAWGWNKYGQLGLGDN-----------------NNRDLPVQV- 420
Query: 277 QGSVNSSGKAGRSYVKEIACGGRHS 301
++N G+A IACG H+
Sbjct: 421 --TMNDGGRAAN-----IACGWWHT 438
>gi|168046566|ref|XP_001775744.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672896|gb|EDQ59427.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 441
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 159/320 (49%), Positives = 190/320 (59%), Gaps = 40/320 (12%)
Query: 10 ENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARL-CGGDSWKDVCGGGCGFALATSE 68
EN EC V MWGYLP SP+++P+L P P + D K VC GGCGF +A SE
Sbjct: 7 ENAAAGECS---VRMWGYLPAASPQRTPLLQPTPVPVSVLNDPLKTVCNGGCGFGIAISE 63
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
SG L TWGS D G YL SGK E PE +PLPT++ +V AA GWAHC +VT GEVYTW
Sbjct: 64 SGNLNTWGSTTDHGHCYLISGKQQEVPELYPLPTDSPIVHAAGGWAHCAAVTGDGEVYTW 123
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
GW EC TGKQ+ L + EEV+KRRK + E
Sbjct: 124 GWSECT-----------------KPTGKQT-LRNLACKTTGSDGAEEVIKRRKVITNSAE 165
Query: 189 SENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS--------DMGQVWGWGYGG 240
++P + +E PCLV L+PG++I+ VAAGGRHTL LS D+GQVWGWGYGG
Sbjct: 166 GQSPEASEENAFAPPCLVKLDPGIRISSVAAGGRHTLALSDNTNHMETDVGQVWGWGYGG 225
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
EGQLGLGS I++V P IPC +G R + G SY+K IACGGRH
Sbjct: 226 EGQLGLGSCIRIVSFPQHIPCFNMTDTGNARSGVPIPG----------SYIKAIACGGRH 275
Query: 301 SAVVTDAGALLTFGWGLYGQ 320
SAV+TD GA+LTFGWGLYGQ
Sbjct: 276 SAVITDTGAVLTFGWGLYGQ 295
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 23/120 (19%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
LSP V+ G+ I +AAG HTL +++ G V+ +G GQLG+G + +P LI
Sbjct: 305 LSPSHVSTLQGLSIVGIAAGLWHTLCITNTGDVYSFGGNQFGQLGVGGNNAEL-SPRLI- 362
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
D PLL + SV +ACG RHS V+T +G + +GW YGQ
Sbjct: 363 ---------DAPLLGDELSV------------AVACGARHSVVLTGSGKIFAWGWNKYGQ 401
Score = 38.1 bits (87), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 25/85 (29%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
VA G RH+++L+ G+++ WG+ GQLGLG + +D P+ V
Sbjct: 375 VACGARHSVVLTGSGKIFAWGWNKYGQLGLGD-----------------CNNRDLPMQV- 416
Query: 277 QGSVNSSGKAGRSYVKEIACGGRHS 301
++N G+A IACG H+
Sbjct: 417 --TMNDGGRA-----ASIACGWWHT 434
>gi|168002036|ref|XP_001753720.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695127|gb|EDQ81472.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 478
Score = 283 bits (723), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 162/331 (48%), Positives = 198/331 (59%), Gaps = 40/331 (12%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPA-RLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
V MWGYLP SP+++P+L P P D K VC GGCGF +A SESGKL TWGS +
Sbjct: 17 VRMWGYLPAASPQRAPLLQPTPVPSTPLNDPLKMVCNGGCGFGIAISESGKLNTWGSTTE 76
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
GQ YL SGK E PEP+ LPTE+ +++AA GWAHC +VT GEVYTWGW ECVP+ K
Sbjct: 77 LGQCYLISGKQQEVPEPYSLPTESPIIQAAGGWAHCAAVTGDGEVYTWGWSECVPNIKSN 136
Query: 141 RDFGSAGSFQKDST---GKQSALPTEQ------APPSDKRAGEEVVKRRKTSSA--REES 189
D Q D T G ++L Q S+ + EEV+K+RK S R
Sbjct: 137 PD--ETEQAQGDDTSPSGPNTSLHGRQNHRNLTCKTSESKGAEEVLKKRKVVSFEDRGSP 194
Query: 190 ENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM----------------GQV 233
E+P + +E PCLV L+PG++I+ VAAGGRHTL LS M V
Sbjct: 195 ESPTAAEENVFAPPCLVILDPGIRISTVAAGGRHTLALSGMYSFSYDLIFPHFGNIYSHV 254
Query: 234 WGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
+GWGYGGEGQLGLGSR ++V TP +PC +G V G + G S V
Sbjct: 255 YGWGYGGEGQLGLGSRTRIVSTPQRVPCFSSLENG------VTIGEASIPG----SCVTR 304
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQRMAK 324
IACGGRHSAV+TDAGALLTFGWGLYGQ++ +
Sbjct: 305 IACGGRHSAVITDAGALLTFGWGLYGQQVGQ 335
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 63/120 (52%), Gaps = 23/120 (19%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
LSPCLV+ G+++ +AAG HTL ++D+G V+ +G GQLG+G +P L+
Sbjct: 342 LSPCLVSAMRGLRVVGIAAGLWHTLCITDIGDVYAFGGNQFGQLGVGGNTAET-SPRLV- 399
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
D PLL + SV +ACG RHS V+T +G + +GW YGQ
Sbjct: 400 ---------DAPLLEDETSV------------AVACGARHSVVLTGSGKIFAWGWNKYGQ 438
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 25/85 (29%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
VA G RH+++L+ G+++ WG+ GQLGLG ++ +D P+ V
Sbjct: 412 VACGARHSVVLTGSGKIFAWGWNKYGQLGLGD-----------------SNNRDLPVQV- 453
Query: 277 QGSVNSSGKAGRSYVKEIACGGRHS 301
++N G+A IACG H+
Sbjct: 454 --TMNDGGRA-----ASIACGWWHT 471
>gi|168037867|ref|XP_001771424.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677342|gb|EDQ63814.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 465
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 156/313 (49%), Positives = 190/313 (60%), Gaps = 29/313 (9%)
Query: 24 MWGYLPGTSPEKSPILSPIPARLCG-GDSWKDVCGGGCGFALATSESGKLITWGSADDEG 82
MWGYLP SP+++P+L P + D K VC GGCGF + SESGKL TWGS + G
Sbjct: 1 MWGYLPAASPQRTPLLHPTLVPITALDDPLKIVCNGGCGFGIGISESGKLNTWGSTTELG 60
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
Q YL SGK E PEP+ LPT++ +++AA GWAHC +VT GEVYTWGW ECVPS +
Sbjct: 61 QCYLISGKQQEVPEPYLLPTDSPIIQAAGGWAHCAAVTGNGEVYTWGWSECVPSVTLNAV 120
Query: 143 FGS-------------AGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE-- 187
S S Q S +A +E P S EEV+K+RK S +
Sbjct: 121 EESEQVQEDDIPPDVPGTSLQLLSRNNVNAARSEPLPSS---VVEEVLKKRKVVSFEDGG 177
Query: 188 ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
E+P + DE P LV L+ G++I VAAGGRHTL LSD+G VW WGYGG+GQLGLG
Sbjct: 178 SPESPTAADENVFSPPFLVNLDAGIRIASVAAGGRHTLALSDVGHVWAWGYGGDGQLGLG 237
Query: 248 SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA 307
SR+++V +P IPCL V + V GK +K IACGGRHSAVVTDA
Sbjct: 238 SRMRIVSSPQQIPCLNLTEKA------VARSGVPIPGKC----IKAIACGGRHSAVVTDA 287
Query: 308 GALLTFGWGLYGQ 320
GALLTFGWGL+GQ
Sbjct: 288 GALLTFGWGLHGQ 300
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 23/120 (19%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
LSPC V+ G++I +AAG HTL ++D+G V+ +G GQLG+G + +P +I
Sbjct: 310 LSPCCVSTIGGLRIVGIAAGLWHTLCITDVGDVYAFGGNQFGQLGVGGNAAEL-SPRMI- 367
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
D PLL + V E+ACG RHSAV+T +G + +GW YGQ
Sbjct: 368 ---------DAPLLEDESCV------------EVACGARHSAVLTGSGKIFAWGWNKYGQ 406
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 25/87 (28%)
Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLL 274
+VA G RH+ +L+ G+++ WG+ GQLGLG + +D P+
Sbjct: 378 VEVACGARHSAVLTGSGKIFAWGWNKYGQLGLGD-----------------CNNRDLPV- 419
Query: 275 VRQGSVNSSGKAGRSYVKEIACGGRHS 301
Q ++N G+A IACG H+
Sbjct: 420 --QVTMNDGGRA-----ASIACGWWHT 439
>gi|224098477|ref|XP_002311187.1| predicted protein [Populus trichocarpa]
gi|222851007|gb|EEE88554.1| predicted protein [Populus trichocarpa]
Length = 253
Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 142/244 (58%), Positives = 171/244 (70%), Gaps = 19/244 (7%)
Query: 3 MNGSKREENE-KMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG 61
MNG ++EE M+ E +VYMWGYLPG P++SPILSP+ R +WKDVCGGGCG
Sbjct: 1 MNGERKEEGVVNMDVHNEKLVYMWGYLPGALPQRSPILSPLAVRSTV-YAWKDVCGGGCG 59
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
FA+A SESGKLITWGS DD GQSY+TSGKHGETPE FPLPTEAS+VKAAAGWAHCV+ T
Sbjct: 60 FAMAISESGKLITWGSTDDLGQSYVTSGKHGETPEAFPLPTEASIVKAAAGWAHCVAATG 119
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP-------------- 167
GEVYTWGW+EC+PS KV D AG +KD +Q+ TEQ P
Sbjct: 120 NGEVYTWGWKECIPSGKVFSDPSGAGGMEKDVFERQNLFFTEQGSPRSQGPRSSGGSGTL 179
Query: 168 --SDKR-AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
D R + +E KRR+ SSA++ +E+ ++GDE + PCLVTLNPGV+I V+AGGRHT
Sbjct: 180 SGLDGRGSKDESTKRRRISSAKQAAESSSTGDETPSAFPCLVTLNPGVRIVTVSAGGRHT 239
Query: 225 LILS 228
L LS
Sbjct: 240 LTLS 243
>gi|302793045|ref|XP_002978288.1| hypothetical protein SELMODRAFT_108548 [Selaginella moellendorffii]
gi|300154309|gb|EFJ20945.1| hypothetical protein SELMODRAFT_108548 [Selaginella moellendorffii]
Length = 454
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 154/319 (48%), Positives = 196/319 (61%), Gaps = 21/319 (6%)
Query: 13 KMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCG-GDSWKDVCGGGCGFALATSESGK 71
+++ ++ V MWGYLP +SP++SPI+ P D W+ VC GGCGFALA SESGK
Sbjct: 2 EIQGTRKLGVRMWGYLPASSPQRSPIVVPTKVSPASPDDGWRAVCSGGCGFALALSESGK 61
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
L TWGS DD GQ Y SGKH E PEPFPL T ++ AAAGWAHC VTE GEVYTWGW+
Sbjct: 62 LHTWGSTDDLGQCYHISGKHQEHPEPFPLQTPPAIF-AAAGWAHCAVVTETGEVYTWGWK 120
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALP-----TEQAPPSDKRAGEEVVKRRKTSSAR 186
ECVPS K + G +G D G+ L + +P A + K+RK S+
Sbjct: 121 ECVPSDKNCVEQGVSGD-PYDYQGRTEELKHVEPDLDSSPGHSPEARLDSSKKRKVSTDE 179
Query: 187 EES-ENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS----DMGQVWGWGYGGE 241
S ++P +G + ++P P K+ VA GGRHTL L+ GQVW WGYGGE
Sbjct: 180 AGSPDSPGAGVDEAVVAPLCCVPMP-AKVILVATGGRHTLALTGKFFHTGQVWSWGYGGE 238
Query: 242 GQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
GQLGLG+R++ V +P IP LE + +R+G+ + K SY+ IACGGRHS
Sbjct: 239 GQLGLGTRMRTVSSPQPIP-LEPST------YWLRKGNRAGAVKPPGSYIVGIACGGRHS 291
Query: 302 AVVTDAGALLTFGWGLYGQ 320
A++TD GA+LTFGWGLYGQ
Sbjct: 292 AILTDGGAVLTFGWGLYGQ 310
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 23/120 (19%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
LSP V+ G+ +T +A+G HTL ++D G+V+ +G GQLG+G +P
Sbjct: 320 LSPNYVSSLGGLHVTAIASGLWHTLCITDTGEVYAFGGNQFGQLGVGGDHS-----ETLP 374
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
L AA +D K ++CG RHSA+ T+ G + +GW YGQ
Sbjct: 375 KLVEAAVLEDE------------------CAKSVSCGARHSAITTEKGKVFCWGWNKYGQ 416
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA 266
V+ G RH+ I ++ G+V+ WG+ GQLGLG TPH +P LEH A
Sbjct: 390 VSCGARHSAITTEKGKVFCWGWNKYGQLGLGDTGDR-DTPHEVP-LEHRA 437
>gi|302765727|ref|XP_002966284.1| hypothetical protein SELMODRAFT_85679 [Selaginella moellendorffii]
gi|300165704|gb|EFJ32311.1| hypothetical protein SELMODRAFT_85679 [Selaginella moellendorffii]
Length = 453
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 156/321 (48%), Positives = 196/321 (61%), Gaps = 26/321 (8%)
Query: 13 KMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCG-GDSWKDVCGGGCGFALATSESGK 71
+++ ++ V MWGYLP +SP++SPI+ P D W+ VC GGCGFALA SESGK
Sbjct: 2 EIQGTRKLGVRMWGYLPASSPQRSPIVVPTKVSPASPDDGWRAVCSGGCGFALALSESGK 61
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
L TWGS DD GQ Y SGKH E PEPFPL T ++ AAAGWAHC VTE GEVYTWGW+
Sbjct: 62 LHTWGSTDDLGQCYHISGKHQEHPEPFPLQTPPAIF-AAAGWAHCAVVTETGEVYTWGWK 120
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALP-----TEQAPPSDKRAGEEVVKRRKTSSAR 186
ECVPS K + G +G D G+ L + +P A + K+RK S+
Sbjct: 121 ECVPSDKNCVEQGVSGD-PYDYQGRTEELKHVEPDLDSSPGHSPEALLDSSKKRKVST-- 177
Query: 187 EESENPASG----DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS---DMGQVWGWGYG 239
+E+ +P S DE C V + K+ VA GGRHT +L D GQVW WGYG
Sbjct: 178 DEAGSPDSSGAGVDEAVVAPLCCVPMP--AKVILVATGGRHTFVLFRILDTGQVWSWGYG 235
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
GEGQLGLG+R++ V +P IP LE + +R+G+ + K SY+ IACGGR
Sbjct: 236 GEGQLGLGTRMRTVSSPQPIP-LEPST------YWLRKGNRAGAVKPPGSYIVGIACGGR 288
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
HSA++TD GA+LTFGWGLYGQ
Sbjct: 289 HSAILTDGGAVLTFGWGLYGQ 309
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 23/120 (19%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
LSP V+ G+ +T +A+G HTL ++D G+V+ +G GQLG+G +P
Sbjct: 319 LSPNYVSSLGGLHVTAIASGLWHTLCITDTGEVYAFGGNQFGQLGVGGDHS-----ETLP 373
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
L AA +D K ++CG RHSA+ T+ G + +GW YGQ
Sbjct: 374 KLVEAAVLEDE------------------CAKSVSCGARHSAITTEKGKVFCWGWNKYGQ 415
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA 266
V+ G RH+ I ++ G+V+ WG+ GQLGLG TPH +P LEH A
Sbjct: 389 VSCGARHSAITTEKGKVFCWGWNKYGQLGLGDTGDR-DTPHEVP-LEHRA 436
>gi|414879725|tpg|DAA56856.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 431
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 140/287 (48%), Positives = 179/287 (62%), Gaps = 51/287 (17%)
Query: 82 GQSYLTSGKH-----------------------------GETPEPFPLPTEASVVKAAAG 112
GQSY+T+GKH ETPE FPLP ++V+A AG
Sbjct: 2 GQSYVTAGKHEVITLMLSCFPAPCEKVQDLLLKIEYYTSQETPEAFPLPRGVAIVRADAG 61
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ-------- 164
WAHCV++T+ G+VYTWGW+ECVP+ +V D S G+ +KD +Q A+ T+Q
Sbjct: 62 WAHCVAITDEGDVYTWGWKECVPTGRVIGDQSSVGTKEKDE--RQMAMATDQGVSPRSQV 119
Query: 165 --------APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
+ PS+ R ++ KRR+ SSA+ E+ S DE + PC+VT N GVKI
Sbjct: 120 SRTSSGAASGPSESRGTDDSTKRRRLSSAKHGPESSTSSDESLSAPPCVVTFNTGVKIVS 179
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
VAAGGRHTL LSD+GQVWGWGYGGEGQLGLGSRI+ V +PH +PC+E A KDRP ++
Sbjct: 180 VAAGGRHTLALSDLGQVWGWGYGGEGQLGLGSRIRTVSSPHPVPCIESALYSKDRPSAMK 239
Query: 277 QGSVNSSGKAGR---SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G+ + G + + V+ IACGGRHSA VTD+GALLTFGWGLYGQ
Sbjct: 240 -GNKAAEGHVSKVLGNCVRAIACGGRHSAAVTDSGALLTFGWGLYGQ 285
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 109/288 (37%), Gaps = 74/288 (25%)
Query: 76 GSADDEGQSYLTSGKHG------------ETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
G+ D + L+S KHG P T +V AAG H +++++ G
Sbjct: 135 GTDDSTKRRRLSSAKHGPESSTSSDESLSAPPCVVTFNTGVKIVSVAAGGRHTLALSDLG 194
Query: 124 EVYTWGW--------------------RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
+V+ WG+ C+ SA ++D SA K + G S +
Sbjct: 195 QVWGWGYGGEGQLGLGSRIRTVSSPHPVPCIESALYSKDRPSAMKGNKAAEGHVSKVLGN 254
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESE-----------NPASGDEFFTLSPCLVTLNPGV 212
+ + S+A +S G+ LSP V+ G
Sbjct: 255 CV--------RAIACGGRHSAAVTDSGALLTFGWGLYGQCGQGNTDDVLSPTCVSSILGS 306
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
K+ VAAG HT+ S G V+ +G GQLG GS +P L A S +++
Sbjct: 307 KMQDVAAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSD-----QAETVPKLVDATSLENK- 360
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ ++CG RHSA++TD G + +GW YGQ
Sbjct: 361 -----------------NARSVSCGARHSAIITDEGEVFCWGWNKYGQ 391
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVP 254
V+ G RH+ I++D G+V+ WG+ GQLGLG + + VP
Sbjct: 365 VSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVP 403
>gi|224112701|ref|XP_002316265.1| predicted protein [Populus trichocarpa]
gi|222865305|gb|EEF02436.1| predicted protein [Populus trichocarpa]
Length = 202
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 117/203 (57%), Positives = 143/203 (70%), Gaps = 18/203 (8%)
Query: 24 MWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQ 83
MWGYLPG P++SPI SP+ R +WKDVCGGGCGFA+A SESGKLITWGS DD GQ
Sbjct: 1 MWGYLPGALPQRSPISSPLAVRSTV-YAWKDVCGGGCGFAMAISESGKLITWGSTDDLGQ 59
Query: 84 SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDF 143
SY+TSGKHGETPE FPLPTEAS+V+AAAGWAHCV+ T+ GEVYTWGW+EC+PS KV D
Sbjct: 60 SYVTSGKHGETPEAFPLPTEASIVEAAAGWAHCVAATDTGEVYTWGWKECIPSGKVFGDP 119
Query: 144 GSAGSFQKDSTGKQSALPTEQAPPS----------------DKR-AGEEVVKRRKTSSAR 186
AG KD+ +Q+ TEQ P D R +G+E KRR+ +SA+
Sbjct: 120 SGAGGSAKDAFERQNLFFTEQVSPRSQGSRSSSGSGTFSGVDGRGSGDESTKRRRIASAK 179
Query: 187 EESENPASGDEFFTLSPCLVTLN 209
+ +E+ ++GDE + PCLVTLN
Sbjct: 180 QAAESSSAGDETLSALPCLVTLN 202
>gi|357460951|ref|XP_003600757.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355489805|gb|AES71008.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 260
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/121 (68%), Positives = 99/121 (81%), Gaps = 11/121 (9%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
PCLVTLNPGVKIT VAAGGRHTL+LSD+GQVWGWGYGGEGQLGLGSR++MV +PH+IPC+
Sbjct: 2 PCLVTLNPGVKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQLGLGSRVRMVSSPHIIPCI 61
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGR---SYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
+ ++ + QGS++S G R S +K IACGGRHSAV+TDAGA+L FGWGLYG
Sbjct: 62 DSSS--------LVQGSMSSEGHNFRIPGSCIKAIACGGRHSAVITDAGAVLAFGWGLYG 113
Query: 320 Q 320
Q
Sbjct: 114 Q 114
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 61/121 (50%), Gaps = 25/121 (20%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLI 259
LSP V+ G++I VAAG HT+ S G V+ +G GQLG GS + + +P
Sbjct: 124 LSPTCVSSLLGIQIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETLPRLLDC 183
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
P LE+ VN VK I+CG RH+A+VTD G + ++GW YG
Sbjct: 184 PSLEN---------------VN---------VKTISCGARHTALVTDNGKVFSWGWNKYG 219
Query: 320 Q 320
Q
Sbjct: 220 Q 220
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPT 255
V + ++ G RHT +++D G+V+ WG+ GQLGLG I + +P+
Sbjct: 189 VNVKTISCGARHTALVTDNGKVFSWGWNKYGQLGLGDVIDRNIPS 233
>gi|224112699|ref|XP_002316264.1| predicted protein [Populus trichocarpa]
gi|222865304|gb|EEF02435.1| predicted protein [Populus trichocarpa]
Length = 164
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/97 (69%), Positives = 83/97 (85%), Gaps = 4/97 (4%)
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
+SD+GQVWGWGYGGEGQLGLGSRI+MV +PH IPC++ +A GKDR +++ +G + S G++
Sbjct: 8 VSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCID-SAYGKDRAVVLSRGGMTSEGQS 66
Query: 287 GR---SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
R S+VK IACGGRHSAV+TDAGALLTFGWGLYGQ
Sbjct: 67 FRVPGSHVKGIACGGRHSAVITDAGALLTFGWGLYGQ 103
>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
Length = 440
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 120/281 (42%), Gaps = 59/281 (20%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVK 108
+ G ++A + +WG +D GQ HG+ E P PT+ S +V
Sbjct: 19 IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGDA-EDRPSPTQLSALDGHQIVS 71
Query: 109 AAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---- 163
G H V+ +++G EVY+WGW DFG G +S+ + LP +
Sbjct: 72 VTCGADHTVAYSQSGMEVYSWGWG----------DFGRLG--HGNSSDLFTPLPIKALHG 119
Query: 164 ----QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
Q D ++ S R ++ GD +L P + G++I VAA
Sbjct: 120 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAA 179
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
G HT +++ G ++GWG+G G LGLG R T L+P
Sbjct: 180 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDR-----TDRLVP-----------------ER 217
Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V S+G S V ACG RH+ V+ +GAL T+GW YGQ
Sbjct: 218 VTSTGGEKMSMV---ACGWRHTISVSYSGALYTYGWSKYGQ 255
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 121/306 (39%), Gaps = 80/306 (26%)
Query: 41 PIPARLCGGDSWKDV---CGGGCGFALATSESG-KLITWGSADDEGQSYLTSGKHGETPE 96
P P +L D + V CG +A S+SG ++ +WG D HG + +
Sbjct: 56 PSPTQLSALDGHQIVSVTCG--ADHTVAYSQSGMEVYSWGWGD------FGRLGHGNSSD 107
Query: 97 PF-PLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
F PLP +A + + A G +HC++VT GEV +WG +
Sbjct: 108 LFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWG---------------------R 146
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-----------------NPAS 194
+ G+ TE + K E ++ + ++ E + N
Sbjct: 147 NQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL 206
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GD L P VT G K++ VA G RHT+ +S G ++ +G+ GQLG G
Sbjct: 207 GDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDL----- 261
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
HLIP A S S++ +I+ G RH+ +T G L +G
Sbjct: 262 EDHLIPHKLEALS--------------------NSFISQISGGWRHTMALTSDGKLYGWG 301
Query: 315 WGLYGQ 320
W +GQ
Sbjct: 302 WNKFGQ 307
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 79/214 (36%), Gaps = 26/214 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G A +E G L WG G L PE + A GW H +S
Sbjct: 180 GAEHTAAVTEDGDLYGWGWGR-YGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTIS 238
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
V+ +G +YT+GW + +G G + +P + S+ +
Sbjct: 239 VSYSGALYTYGWSK----------YGQLGHGDLE----DHLIPHKLEALSNSFISQISGG 284
Query: 179 RRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
R T + + + G+ SP V K+ +V+ G RHTL ++
Sbjct: 285 WRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVT 344
Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
+ V+ WG G GQLG+G + P +I L
Sbjct: 345 ERNNVFAWGRGTNGQLGIGESVDR-NFPKIIEAL 377
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 42 IPARL-CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
IP +L +S+ GG +A + GKL WG + GQ + + +P
Sbjct: 266 IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWG-WNKFGQVGVGNNLDQCSPVQVRF 324
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P + VV+ + GW H ++VTE V+ WG
Sbjct: 325 PDDQKVVQVSCGWRHTLAVTERNNVFAWG 353
>gi|218189367|gb|EEC71794.1| hypothetical protein OsI_04421 [Oryza sativa Indica Group]
Length = 73
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 42/53 (79%), Gaps = 3/53 (5%)
Query: 18 KETVVYMWGYLPGTSPEKSPILSPIPARL---CGGDSWKDVCGGGCGFALATS 67
KE VV MWGYLPG SP++SP+L P+P RL GGD W+DVCGGGCGFA+A S
Sbjct: 17 KERVVLMWGYLPGVSPQRSPLLGPVPVRLPAAAGGDGWRDVCGGGCGFAMAIS 69
>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
Length = 406
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 120/281 (42%), Gaps = 59/281 (20%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVK 108
+ G ++A + +WG +D GQ HG+ E P PT+ S +V
Sbjct: 20 IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGDA-EDRPSPTQLSALDGHQIVS 72
Query: 109 AAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---- 163
G H V+ +++G EVY+WGW DFG G +S+ + LP +
Sbjct: 73 VTCGADHTVAYSQSGMEVYSWGWG----------DFGRLG--HGNSSDLFTPLPIKALHG 120
Query: 164 ----QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
Q D ++ S R ++ GD +L P + G++I VAA
Sbjct: 121 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAA 180
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
G HT +++ G ++GWG+G G LGLG R T L+P
Sbjct: 181 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDR-----TDRLVP-----------------ER 218
Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V S+G S V ACG RH+ V+ +GAL T+GW YGQ
Sbjct: 219 VTSTGGEKMSMV---ACGWRHTISVSYSGALYTYGWSKYGQ 256
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 121/306 (39%), Gaps = 80/306 (26%)
Query: 41 PIPARLCGGDSWKDV---CGGGCGFALATSESG-KLITWGSADDEGQSYLTSGKHGETPE 96
P P +L D + V CG +A S+SG ++ +WG D HG + +
Sbjct: 57 PSPTQLSALDGHQIVSVTCG--ADHTVAYSQSGMEVYSWGWGD------FGRLGHGNSSD 108
Query: 97 PF-PLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
F PLP +A + + A G +HC++VT GEV +WG +
Sbjct: 109 LFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWG---------------------R 147
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-----------------NPAS 194
+ G+ TE + K E ++ + ++ E + N
Sbjct: 148 NQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL 207
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GD L P VT G K++ VA G RHT+ +S G ++ +G+ GQLG G
Sbjct: 208 GDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDL----- 262
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
HLIP A S S++ +I+ G RH+ +T G L +G
Sbjct: 263 EDHLIPHKLEALS--------------------NSFISQISGGWRHTMALTSDGKLYGWG 302
Query: 315 WGLYGQ 320
W +GQ
Sbjct: 303 WNKFGQ 308
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 78/208 (37%), Gaps = 26/208 (12%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G L WG G L PE + A GW H +SV+ +G
Sbjct: 187 AVTEDGDLYGWGWGR-YGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 245
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + +P + S+ + R T +
Sbjct: 246 LYTYGWSK----------YGQLGHGDLE----DHLIPHKLEALSNSFISQISGGWRHTMA 291
Query: 185 AREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+ + G+ SP V K+ +V+ G RHTL +++ V+
Sbjct: 292 LTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVF 351
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
WG G GQLG+G + P +I L
Sbjct: 352 AWGRGTNGQLGIGESVDR-NFPKIIEAL 378
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 42 IPARL-CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
IP +L +S+ GG +A + GKL WG + GQ + + +P
Sbjct: 267 IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWG-WNKFGQVGVGNNLDQCSPVQVRF 325
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P + VV+ + GW H ++VTE V+ WG
Sbjct: 326 PDDQKVVQVSCGWRHTLAVTERNNVFAWG 354
>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
Length = 440
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 119/281 (42%), Gaps = 59/281 (20%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVK 108
+ G ++A + +WG +D GQ HG+ E P PT+ S +V
Sbjct: 19 IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGDA-EDRPSPTQLSALDGHQIVS 71
Query: 109 AAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---- 163
G H V+ +++G EVY+WGW DFG G +S+ + LP +
Sbjct: 72 VTCGADHTVAYSQSGMEVYSWGWG----------DFGRLG--HGNSSDLFTPLPIKALHG 119
Query: 164 ----QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
Q D ++ S R ++ GD +L P + G++I VAA
Sbjct: 120 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAA 179
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
G HT +++ G ++GWG+G G LGLG R L+P +A G+ +
Sbjct: 180 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDR-----NDRLVPERVTSAGGEKMSM------ 228
Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ACG RH+ V+ +GAL T+GW YGQ
Sbjct: 229 --------------VACGWRHTISVSYSGALYTYGWSKYGQ 255
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 121/306 (39%), Gaps = 80/306 (26%)
Query: 41 PIPARLCGGDSWKDV---CGGGCGFALATSESG-KLITWGSADDEGQSYLTSGKHGETPE 96
P P +L D + V CG +A S+SG ++ +WG D HG + +
Sbjct: 56 PSPTQLSALDGHQIVSVTCG--ADHTVAYSQSGMEVYSWGWGD------FGRLGHGNSSD 107
Query: 97 PF-PLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
F PLP +A + + A G +HC++VT GEV +WG +
Sbjct: 108 LFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWG---------------------R 146
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-----------------NPAS 194
+ G+ TE + K E ++ + ++ E + N
Sbjct: 147 NQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL 206
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GD L P VT G K++ VA G RHT+ +S G ++ +G+ GQLG G
Sbjct: 207 GDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDL----- 261
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
HLIP A S S++ +I+ G RH+ +T G L +G
Sbjct: 262 EDHLIPHKLEALS--------------------NSFISQISGGWRHTMALTSDGKLYGWG 301
Query: 315 WGLYGQ 320
W +GQ
Sbjct: 302 WNKFGQ 307
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 79/214 (36%), Gaps = 26/214 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G A +E G L WG G L PE + A GW H +S
Sbjct: 180 GAEHTAAVTEDGDLYGWGWGR-YGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTIS 238
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
V+ +G +YT+GW + +G G + +P + S+ +
Sbjct: 239 VSYSGALYTYGWSK----------YGQLGHGDLED----HLIPHKLEALSNSFISQISGG 284
Query: 179 RRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
R T + + + G+ SP V K+ +V+ G RHTL ++
Sbjct: 285 WRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVT 344
Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
+ V+ WG G GQLG+G + P +I L
Sbjct: 345 ERNNVFAWGRGTNGQLGIGESVDR-NFPKIIEAL 377
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 42 IPARL-CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
IP +L +S+ GG +A + GKL WG + GQ + + +P
Sbjct: 266 IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWG-WNKFGQVGVGNNLDQCSPVQVRF 324
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P + VV+ + GW H ++VTE V+ WG
Sbjct: 325 PDDQKVVQVSCGWRHTLAVTERNNVFAWG 353
>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
Length = 370
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 120/281 (42%), Gaps = 59/281 (20%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVK 108
+ G ++A + +WG +D GQ HG+ E P PT+ S +V
Sbjct: 8 IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGDA-EDRPSPTQLSALDGHQIVS 60
Query: 109 AAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---- 163
G H V+ +++G EVY+WGW DFG G +S+ + LP +
Sbjct: 61 VTCGADHTVAYSQSGMEVYSWGWG----------DFGRLG--HGNSSDLFTPLPIKALHG 108
Query: 164 ----QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
Q D ++ S R ++ GD +L P + G++I VAA
Sbjct: 109 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAA 168
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
G HT +++ G ++GWG+G G LGLG R T L+P
Sbjct: 169 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDR-----TDRLVP-----------------ER 206
Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V S+G S V ACG RH+ V+ +GAL T+GW YGQ
Sbjct: 207 VTSTGGEKMSMV---ACGWRHTISVSYSGALYTYGWSKYGQ 244
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 121/306 (39%), Gaps = 80/306 (26%)
Query: 41 PIPARLCGGDSWKDV---CGGGCGFALATSESG-KLITWGSADDEGQSYLTSGKHGETPE 96
P P +L D + V CG +A S+SG ++ +WG D HG + +
Sbjct: 45 PSPTQLSALDGHQIVSVTCG--ADHTVAYSQSGMEVYSWGWGD------FGRLGHGNSSD 96
Query: 97 PF-PLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
F PLP +A + + A G +HC++VT GEV +WG +
Sbjct: 97 LFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWG---------------------R 135
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-----------------NPAS 194
+ G+ TE + K E ++ + ++ E + N
Sbjct: 136 NQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL 195
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GD L P VT G K++ VA G RHT+ +S G ++ +G+ GQLG G
Sbjct: 196 GDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDL----- 250
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
HLIP A S S++ +I+ G RH+ +T G L +G
Sbjct: 251 EDHLIPHKLEALS--------------------NSFISQISGGFRHTMALTSDGKLYGWG 290
Query: 315 WGLYGQ 320
W +GQ
Sbjct: 291 WNKFGQ 296
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 78/208 (37%), Gaps = 26/208 (12%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G L WG G L PE + A GW H +SV+ +G
Sbjct: 175 AVTEDGDLYGWGWGR-YGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 233
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + +P + S+ + R T +
Sbjct: 234 LYTYGWSK----------YGQLGHGDLED----HLIPHKLEALSNSFISQISGGFRHTMA 279
Query: 185 AREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+ + G+ SP V K+ +V+ G RHTL +++ V+
Sbjct: 280 LTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVF 339
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
WG G GQLG+G + P +I L
Sbjct: 340 AWGRGTNGQLGIGESVDR-NFPKIIEAL 366
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 42 IPARL-CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
IP +L +S+ GG +A + GKL WG + GQ + + +P
Sbjct: 255 IPHKLEALSNSFISQISGGFRHTMALTSDGKLYGWG-WNKFGQVGVGNNLDQCSPVQVRF 313
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P + VV+ + GW H ++VTE V+ WG
Sbjct: 314 PDDQKVVQVSCGWRHTLAVTERNNVFAWG 342
>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
Length = 374
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 120/281 (42%), Gaps = 59/281 (20%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVK 108
+ G ++A + +WG +D GQ HG+ E P PT+ S +V
Sbjct: 8 IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGDA-EDRPSPTQLSALDGHQIVS 60
Query: 109 AAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---- 163
G H V+ +++G EVY+WGW DFG G +S+ + LP +
Sbjct: 61 VTCGADHTVAYSQSGMEVYSWGWG----------DFGRLG--HGNSSDLFTPLPIKALHG 108
Query: 164 ----QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
Q D ++ S R ++ GD +L P + G++I VAA
Sbjct: 109 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAA 168
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
G HT +++ G ++GWG+G G LGLG R T L+P
Sbjct: 169 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDR-----TDRLVP-----------------ER 206
Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V S+G S V ACG RH+ V+ +GAL T+GW YGQ
Sbjct: 207 VTSTGGEKMSMV---ACGWRHTISVSYSGALYTYGWSKYGQ 244
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 121/306 (39%), Gaps = 80/306 (26%)
Query: 41 PIPARLCGGDSWKDV---CGGGCGFALATSESG-KLITWGSADDEGQSYLTSGKHGETPE 96
P P +L D + V CG +A S+SG ++ +WG D HG + +
Sbjct: 45 PSPTQLSALDGHQIVSVTCG--ADHTVAYSQSGMEVYSWGWGD------FGRLGHGNSSD 96
Query: 97 PF-PLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
F PLP +A + + A G +HC++VT GEV +WG +
Sbjct: 97 LFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWG---------------------R 135
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-----------------NPAS 194
+ G+ TE + K E ++ + ++ E + N
Sbjct: 136 NQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL 195
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GD L P VT G K++ VA G RHT+ +S G ++ +G+ GQLG G
Sbjct: 196 GDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDL----- 250
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
HLIP A S S++ +I+ G RH+ +T G L +G
Sbjct: 251 EDHLIPHKLEALS--------------------NSFISQISGGWRHTMALTSDGKLYGWG 290
Query: 315 WGLYGQ 320
W +GQ
Sbjct: 291 WNKFGQ 296
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 78/208 (37%), Gaps = 26/208 (12%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G L WG G L PE + A GW H +SV+ +G
Sbjct: 175 AVTEDGDLYGWGWGR-YGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 233
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + +P + S+ + R T +
Sbjct: 234 LYTYGWSK----------YGQLGHGDLED----HLIPHKLEALSNSFISQISGGWRHTMA 279
Query: 185 AREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+ + G+ SP V K+ +V+ G RHTL +++ V+
Sbjct: 280 LTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVF 339
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
WG G GQLG+G + P +I L
Sbjct: 340 AWGRGTNGQLGIGESVDR-NFPKIIEAL 366
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 42 IPARL-CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
IP +L +S+ GG +A + GKL WG + GQ + + +P
Sbjct: 255 IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWG-WNKFGQVGVGNNLDQCSPVQVRF 313
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P + VV+ + GW H ++VTE V+ WG
Sbjct: 314 PDDQKVVQVSCGWRHTLAVTERNNVFAWG 342
>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
Protein Uvr8
Length = 372
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 119/281 (42%), Gaps = 59/281 (20%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVK 108
+ G ++A + +WG +D GQ HG+ E P PT+ S +V
Sbjct: 10 IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGDA-EDRPSPTQLSALDGHQIVS 62
Query: 109 AAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---- 163
G H V+ +++G EVY+WGW DFG G +S+ + LP +
Sbjct: 63 VTCGADHTVAYSQSGXEVYSWGWG----------DFGRLG--HGNSSDLFTPLPIKALHG 110
Query: 164 ----QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
Q D + S R ++ GD +L P + G++I VAA
Sbjct: 111 IRIKQIACGDSHCLAVTXEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKXVAA 170
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
G HT +++ G ++GWG+G G LGLG R T L+P
Sbjct: 171 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDR-----TDRLVP-----------------ER 208
Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V S+G S V ACG RH+ V+ +GAL T+GW YGQ
Sbjct: 209 VTSTGGEKXSXV---ACGWRHTISVSYSGALYTYGWSKYGQ 246
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 120/306 (39%), Gaps = 80/306 (26%)
Query: 41 PIPARLCGGDSWKDV---CGGGCGFALATSESG-KLITWGSADDEGQSYLTSGKHGETPE 96
P P +L D + V CG +A S+SG ++ +WG D HG + +
Sbjct: 47 PSPTQLSALDGHQIVSVTCG--ADHTVAYSQSGXEVYSWGWGD------FGRLGHGNSSD 98
Query: 97 PF-PLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
F PLP +A + + A G +HC++VT GEV +WG +
Sbjct: 99 LFTPLPIKALHGIRIKQIACGDSHCLAVTXEGEVQSWG---------------------R 137
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-----------------NPAS 194
+ G+ TE + K E ++ + ++ E + N
Sbjct: 138 NQNGQLGLGDTEDSLVPQKIQAFEGIRIKXVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL 197
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GD L P VT G K + VA G RHT+ +S G ++ +G+ GQLG G
Sbjct: 198 GDRTDRLVPERVTSTGGEKXSXVACGWRHTISVSYSGALYTYGWSKYGQLGHGDL----- 252
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
HLIP A S S++ +I+ G RH+ +T G L +G
Sbjct: 253 EDHLIPHKLEALS--------------------NSFISQISGGARHTXALTSDGKLYGWG 292
Query: 315 WGLYGQ 320
W +GQ
Sbjct: 293 WNKFGQ 298
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 77/208 (37%), Gaps = 26/208 (12%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G L WG G L PE A GW H +SV+ +G
Sbjct: 177 AVTEDGDLYGWGWGR-YGNLGLGDRTDRLVPERVTSTGGEKXSXVACGWRHTISVSYSGA 235
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + +P + S+ + R T +
Sbjct: 236 LYTYGWSK----------YGQLGHGDLED----HLIPHKLEALSNSFISQISGGARHTXA 281
Query: 185 AREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+ + G+ SP V K+ +V+ G RHTL +++ V+
Sbjct: 282 LTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVF 341
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
WG G GQLG+G + P +I L
Sbjct: 342 AWGRGTNGQLGIGESVDR-NFPKIIEAL 368
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query: 42 IPARL-CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
IP +L +S+ GG A + GKL WG + GQ + + +P
Sbjct: 257 IPHKLEALSNSFISQISGGARHTXALTSDGKLYGWG-WNKFGQVGVGNNLDQCSPVQVRF 315
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P + VV+ + GW H ++VTE V+ WG
Sbjct: 316 PDDQKVVQVSCGWRHTLAVTERNNVFAWG 344
>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
Length = 440
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 119/291 (40%), Gaps = 54/291 (18%)
Query: 39 LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
++P P R+ + G ++A + +WG +D GQ + +P
Sbjct: 10 VTPPPRRVL-------IISAGASHSVALLSGDIVCSWGRGED-GQLGHGDAEDRLSPTQL 61
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ +V G H V+ +E+ EVY+WGW DFG G +S+
Sbjct: 62 SALDDHQIVSVTCGADHTVAYSESRMEVYSWGWG----------DFGRLG--HGNSSDLF 109
Query: 158 SALPTE--------QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLN 209
+ LP + Q D ++ S R ++ GD +L P +
Sbjct: 110 TPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF 169
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
G++I VAAG HT +++ G ++GWG+G G LGLG R L+P +A G+
Sbjct: 170 EGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR-----NDRLVPERVTSAGGE 224
Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +ACG RH+ V+ +GAL T+GW YGQ
Sbjct: 225 KMSM--------------------VACGWRHTISVSYSGALYTYGWSKYGQ 255
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 100/252 (39%), Gaps = 68/252 (26%)
Query: 91 HGETPEPF-PLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS 145
HG + + F PLP +A + + A G +HC++VT GEV +WG
Sbjct: 102 HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWG---------------- 145
Query: 146 AGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE--------------- 190
++ G+ TE + K E ++ + ++ E +
Sbjct: 146 -----RNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGR 200
Query: 191 --NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
N GD L P VT G K++ VA G RHT+ +S G ++ +G+ GQLG G
Sbjct: 201 YGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGD 260
Query: 249 RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAG 308
++ PH + L G S + +I+ G RH+ +T G
Sbjct: 261 -LEDHLVPHKLEAL------------------------GNSVISQISGGWRHTMALTSDG 295
Query: 309 ALLTFGWGLYGQ 320
L +GW +GQ
Sbjct: 296 KLYGWGWNKFGQ 307
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 81/223 (36%), Gaps = 36/223 (16%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA 114
+ G A +E G L WG G L PE + A GW
Sbjct: 176 MVAAGAEHTAAVTEDGDLYGWGWGR-YGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWR 234
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H +SV+ +G +YT+GW + +G G L P + G
Sbjct: 235 HTISVSYSGALYTYGWSK----------YGQLG---------HGDLEDHLVPHKLEALGN 275
Query: 175 EVVKR-----RKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAA 219
V+ + R T + + + G+ SP V + K+ +V+
Sbjct: 276 SVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRIPDDQKVVQVSC 335
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
G RHTL +++ V+ WG G GQLG+G + P +I L
Sbjct: 336 GWRHTLAVTERNNVFAWGRGTNGQLGIGESLDR-NFPKIIEAL 377
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 42 IPARL-CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
+P +L G+S GG +A + GKL WG + GQ + + +P +
Sbjct: 266 VPHKLEALGNSVISQISGGWRHTMALTSDGKLYGWG-WNKFGQVGVGNNLDQCSPVQVRI 324
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P + VV+ + GW H ++VTE V+ WG
Sbjct: 325 PDDQKVVQVSCGWRHTLAVTERNNVFAWG 353
>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
Length = 440
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 119/281 (42%), Gaps = 59/281 (20%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVK 108
+ G ++A + +WG +D GQ HG+ E P PT+ S +V
Sbjct: 19 IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGDA-EDRPSPTQLSALDGHQIVS 71
Query: 109 AAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---- 163
G H V+ +++G EVY+WGW DFG G +S+ + LP +
Sbjct: 72 VTCGADHTVAYSQSGMEVYSWGWG----------DFGRLG--HGNSSDLFTPLPIKALHG 119
Query: 164 ----QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
Q D ++ S R ++ GD +L P + G+ I VAA
Sbjct: 120 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPIKMVAA 179
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
G HT +++ G ++GWG+G G LGLG R T L+P
Sbjct: 180 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDR-----TDRLVP-----------------ER 217
Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V S+G S V ACG RH+ V+ +GAL T+GW YGQ
Sbjct: 218 VTSTGGEKMSMV---ACGWRHTISVSYSGALYTYGWSKYGQ 255
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 123/299 (41%), Gaps = 66/299 (22%)
Query: 41 PIPARLCGGDSWKDV---CGGGCGFALATSESG-KLITWGSADDEGQSYLTSGKHGETPE 96
P P +L D + V CG +A S+SG ++ +WG D HG + +
Sbjct: 56 PSPTQLSALDGHQIVSVTCG--ADHTVAYSQSGMEVYSWGWGD------FGRLGHGNSSD 107
Query: 97 PF-PLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
F PLP +A + + A G +HC++VT GEV +WG + G + +
Sbjct: 108 LFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQ-------NGQLGLGDT--E 158
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTL 201
DS Q E P AG E T++ E+ + N GD L
Sbjct: 159 DSLVPQKIQAFEGIPIKMVAAGAE-----HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRL 213
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
P VT G K++ VA G RHT+ +S G ++ +G+ GQLG G HLIP
Sbjct: 214 VPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDL-----EDHLIPH 268
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
A S S++ +I+ G RH+ +T G L +GW +GQ
Sbjct: 269 KLEALS--------------------NSFISQISGGWRHTMALTSDGKLYGWGWNKFGQ 307
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 86/240 (35%), Gaps = 35/240 (14%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P+K IP ++ G A +E G L WG G L
Sbjct: 163 PQKIQAFEGIPIKMVAA---------GAEHTAAVTEDGDLYGWGWGR-YGNLGLGDRTDR 212
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
PE + A GW H +SV+ +G +YT+GW + +G G +
Sbjct: 213 LVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSK----------YGQLGHGDLE 262
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLS 202
+P + S+ + R T + + + G+ S
Sbjct: 263 ----DHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCS 318
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P V K+ +V+ G RHTL +++ V+ WG G GQLG+G + P +I L
Sbjct: 319 PVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDR-NFPKIIEAL 377
>gi|449016322|dbj|BAM79724.1| similar to UVB-resistance protein UVR8 [Cyanidioschyzon merolae
strain 10D]
Length = 457
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 120/298 (40%), Gaps = 59/298 (19%)
Query: 60 CG--FALATSESGKLITWGSADD-------EGQSYL----------TSGKHGETPEPFPL 100
CG A S G+L +WG + E +S+L G+ G +
Sbjct: 137 CGRYHTFAVSSDGRLFSWGGGKNGRLGTGTELRSFLPWPVSTVQEKVPGQPGNVRRSLAI 196
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGW------------RECVPSAKVTRD-----F 143
P+E +V G+ H V+++ G VYT GW E A RD
Sbjct: 197 PSECQIVAVECGYHHSVALSAIGVVYTCGWGAYGQLGHGSCNDEPSLLAVTFRDEHGNAL 256
Query: 144 GSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSP 203
+ + S + + + T+ + E S +E +ENP S F+ P
Sbjct: 257 PNLRIIKVASGDRHTLVLTDDGRIYGFGSNEYGQLGITMSCDQETAENPTSKQCVFS-EP 315
Query: 204 CLVT--LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
L+T G +I ++A G RH++ LSD G+V WG+G GQLGLG I M PTP ++
Sbjct: 316 RLLTGGALAGRRIAQIACGERHSVALSDQGEVICWGHGMSGQLGLGESITMTPTPQIL-- 373
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
+ ++ PL R+ V IACG ++ + + G G YG
Sbjct: 374 -----NTRNSPLASRR-------------VTGIACGHENTLFLVSDNEIYVTGSGEYG 413
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 9/108 (8%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+ +VA GG HT IL G ++ G+G GQLGLG RI+ V P + G P
Sbjct: 63 HVLQVACGGSHTAILLRNGALYTVGHGLYGQLGLGQRIRRVSLPTRV-------RGVLGP 115
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +V S ++ +ACG H+ V+ G L ++G G G+
Sbjct: 116 EAIT--NVGRSSAVALPPIEAVACGRYHTFAVSSDGRLFSWGGGKNGR 161
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-MVPTPHLIPCLEHAASGKDRP 272
I VA G HT +S G+++ WG G G+LG G+ ++ +P P + ++ G+ P
Sbjct: 132 IEAVACGRYHTFAVSSDGRLFSWGGGKNGRLGTGTELRSFLPWP--VSTVQEKVPGQ--P 187
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
VR+ S + + CG HS ++ G + T GWG YGQ
Sbjct: 188 GNVRR----SLAIPSECQIVAVECGYHHSVALSAIGVVYTCGWGAYGQ 231
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 20/109 (18%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+I V G H++ LS +G V+ G+G GQLG GS C D P
Sbjct: 201 QIVAVECGYHHSVALSAIGVVYTCGWGAYGQLGHGS------------C-------NDEP 241
Query: 273 LLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
L+ + G A + + ++A G RH+ V+TD G + FG YGQ
Sbjct: 242 SLLAVTFRDEHGNALPNLRIIKVASGDRHTLVLTDDGRIYGFGSNEYGQ 290
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
++V ++ACGG H+A++ GAL T G GLYGQ
Sbjct: 62 NHVLQVACGGSHTAILLRNGALYTVGHGLYGQ 93
>gi|440798633|gb|ELR19700.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein, partial [Acanthamoeba castellanii
str. Neff]
Length = 872
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 119/294 (40%), Gaps = 53/294 (18%)
Query: 39 LSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPE 96
L PI G + V CG ++A E+G + WG A EGQ L +G+
Sbjct: 18 LEPILLERFRGKRIRSVA---CGEQHSMAVGETGDVYVWGRAK-EGQ--LGNGERKAANA 71
Query: 97 PFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
P+ E VV G+ HC++VT G++Y WG GS K+
Sbjct: 72 LKPVRVEGLRHERVVAGVCGYNHCLAVTVGGKLYQWGMLHK----------HVEGSANKE 121
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL------SPCLV 206
G L + + G + EE E + F + SP +V
Sbjct: 122 YFGMAIGLSGLNSDRMKRMVGRSHSTYYAAGATGEELEELSRVQNFGSFTPYTQPSPEVV 181
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA 266
T VK+ +VAAG +L ++ G+V+ WG+ + QLGLG R P L+P L
Sbjct: 182 TGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQLGLGHRYNQ-SVPQLVPHL---- 236
Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
QG ++ CG +HS +++ AG + TFG G++GQ
Sbjct: 237 ----------QG----------VHIVSATCGQQHSVLLSAAGHVYTFGLGVFGQ 270
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 107/288 (37%), Gaps = 64/288 (22%)
Query: 36 SPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET 94
+P P P + G K V G F+LA + G++ +WG +++ Q L +
Sbjct: 171 TPYTQPSPEVVTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGF-NEKCQLGLGHRYNQSV 229
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST 154
P+ P +V A G H V ++ AG VYT+G G F +
Sbjct: 230 PQLVPHLQGVHIVSATCGQQHSVLLSAAGHVYTFGL----------------GVFGQLGH 273
Query: 155 GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
G S +E RR + E ++G+ +I
Sbjct: 274 GVSS---------------DERFPRRVEALVPAEEGVESAGE----------------RI 302
Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK---DR 271
++A G HTL L G VW WG GQ G G+ E A+G+
Sbjct: 303 VQIACGSHHTLALGVSGTVWTWGSAEYGQQG-GTN-----------AYEDWATGQRAEKS 350
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
++ + SG ++ ++CG H+ G++ ++GWG YG
Sbjct: 351 AAMICATPRSLSGCFDGKHIAHVSCGHLHNLATARDGSVYSWGWGSYG 398
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 56/130 (43%), Gaps = 22/130 (16%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMV 253
G + P LV GV I G +H+++LS G V+ +G G GQLG G S +
Sbjct: 222 GHRYNQSVPQLVPHLQGVHIVSATCGQQHSVLLSAAGHVYTFGLGVFGQLGHGVSSDERF 281
Query: 254 P--TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
P L+P E S +R + +IACG H+ + +G +
Sbjct: 282 PRRVEALVPAEEGVESAGER-------------------IVQIACGSHHTLALGVSGTVW 322
Query: 312 TFGWGLYGQR 321
T+G YGQ+
Sbjct: 323 TWGSAEYGQQ 332
>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
30864]
Length = 1230
Score = 77.8 bits (190), Expect = 6e-12, Method: Composition-based stats.
Identities = 76/280 (27%), Positives = 110/280 (39%), Gaps = 56/280 (20%)
Query: 70 GKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
G++ + GS +D+GQ L KH PE ++ + A G H +++T G+V+ WG
Sbjct: 142 GQVYSCGS-NDQGQ--LGHKKHRSKPERVDALEPYTITQIACGETHSLALTSNGQVFAWG 198
Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSAL-PTEQAPPSDKRAGEEVVKRRKTSSAREE 188
D+ Q L P+E + R+ E
Sbjct: 199 ----------------------DNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDEL 236
Query: 189 SENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
+ +F T P LV G KI ++ G +L+LS+ G V+ WG GQL L
Sbjct: 237 DAATLAYMDFMT-RPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCL-R 294
Query: 249 RIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGKAG---------- 287
+K VP P L IP + AA G+ L G V N G+ G
Sbjct: 295 ELKTVPVPTLVKELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIP 354
Query: 288 -------RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ IACG HS V+T+ G + +FG G GQ
Sbjct: 355 SRLKTLEHQFCAHIACGEDHSVVLTETGGVYSFGAGGQGQ 394
Score = 43.9 bits (102), Expect = 0.11, Method: Composition-based stats.
Identities = 60/223 (26%), Positives = 91/223 (40%), Gaps = 31/223 (13%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP----EPFPLPTEASVVKAA 110
VCG F+L SE G + WG + GQ L K P E + +P + + A
Sbjct: 265 VCGAN--FSLVLSERGDVFAWGD-NTSGQLCLRELKTVPVPTLVKELYGIP----IRQLA 317
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT-EQAPPSD 169
AG H +++T G+VY+WG FG G S L T E +
Sbjct: 318 AGGRHTLALTFNGQVYSWG----------NNQFGQLGVGDTAPHTIPSRLKTLEHQFCAH 367
Query: 170 KRAGEE-VVKRRKT----SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
GE+ V +T S G ++P ++ G ++V G RHT
Sbjct: 368 IACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRMIFELMGKSASQVLCGRRHT 427
Query: 225 LI-LSDMGQVWGWGYGGEGQLGLGSRI---KMVPTPHLIPCLE 263
++ +++ +G GG GQLG G + + V TP L+ L+
Sbjct: 428 IVFFPKTNKIYAFGLGGNGQLGTGVGVEPQQHVLTPMLVRVLD 470
>gi|330792530|ref|XP_003284341.1| hypothetical protein DICPUDRAFT_148108 [Dictyostelium purpureum]
gi|325085687|gb|EGC39089.1| hypothetical protein DICPUDRAFT_148108 [Dictyostelium purpureum]
Length = 448
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 118/279 (42%), Gaps = 49/279 (17%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFPLPTEASVV--K 108
D+ GGG + + G L T+GS D G L + K+ TP+P S+
Sbjct: 43 NDIVGGG-SHTMMVANDGDLYTFGSNDCGQLGFKLLENQKYITTPQPVDYFKNNSIKIKN 101
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
+ GW+H ++ G VY+WG +++ F + + +K+ +Q + + +
Sbjct: 102 CSGGWSHSLACDVNGFVYSWGSNS---HSQLGLTFNAIDTTEKEKKPQQLPIKIDSNNNN 158
Query: 169 DKRAGEEVVKR------RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
+ + EV ++ + +E NP + + F +N +KI V+ G R
Sbjct: 159 NNNSNTEVKRKIVFKKKIINNINKENQFNPININYF---------INEKIKIISVSCGMR 209
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
H+++LS +V+GWG GQL + + P L LE G
Sbjct: 210 HSIVLSSDFKVYGWGCNKFGQLSNNVQGVLQELPKL---LEFGGEG-------------- 252
Query: 283 SGKAGRSYVKEIACGGRHSAVV-TDAGALLTFGWGLYGQ 320
V +I+CG +H+ ++ T L+TFG+ YGQ
Sbjct: 253 --------VSQISCGFKHTVLLDTTKKKLITFGFNRYGQ 283
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 22/95 (23%)
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
+V+ WG G GQLGLG+ V +P L+ L+ + V
Sbjct: 5 KVFSWGSGNLGQLGLGNTDDSVSSPSLV--------------LLSNNEIRK--------V 42
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQRMAKCL 326
+I GG H+ +V + G L TFG GQ K L
Sbjct: 43 NDIVGGGSHTMMVANDGDLYTFGSNDCGQLGFKLL 77
>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Pongo abelii]
Length = 1050
Score = 77.0 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 87/322 (27%), Positives = 128/322 (39%), Gaps = 78/322 (24%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S AS +F
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALASDGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
FT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGG 298
GQLGL KDR P V+ V I+CG
Sbjct: 219 AGQLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGE 251
Query: 299 RHSAVVTDAGALLTFGWGLYGQ 320
H+AV+T +G + TFG G YGQ
Sbjct: 252 EHTAVLTKSGGVFTFGAGSYGQ 273
>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
Length = 794
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 55/108 (50%), Gaps = 24/108 (22%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
K+ KVA GG HT+ L+ GQV+ +G G GQLGLGS+I P L+ L
Sbjct: 242 KVVKVACGGNHTVALTASGQVYTFGSGQNGQLGLGSKIMDSNIPKLVEAL---------- 291
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +K IACG H+AVV+D G L TFG G +G+
Sbjct: 292 --------------SKRKIKHIACGESHTAVVSDKGELFTFGDGRHGK 325
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 58/127 (45%), Gaps = 26/127 (20%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH------AA 266
KIT VAAG HTL ++D +++ +G G EG LG G + P I LE A
Sbjct: 88 KITHVAAGRFHTLAVTDSNKLYSFGQGSEGALGHGDETDL-NMPTSIESLEDKDVNIIAC 146
Query: 267 SGKDRPLLVRQGSV-----NSSGKAGR-----SY---------VKEIACGGRHSAVVTDA 307
G + + G + NS G+ G SY V +ACG H+AVVT
Sbjct: 147 GGYHSAAITKNGELYIWGSNSEGQLGLKNDTISYPTMLDLGKSVISVACGYYHTAVVTAD 206
Query: 308 GALLTFG 314
G L TFG
Sbjct: 207 GKLYTFG 213
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 29/136 (21%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAAS 267
K+T +A G HT+++++ G+++ +G GQLG+GS K P + L+ H A+
Sbjct: 36 KVTDIACGDEHTVVVTENGRLFTFGNNEWGQLGIGSN-KTRNKPTTVKALKPEKITHVAA 94
Query: 268 GKDRPLLVR---------QGSVNSSGKAGRS--------------YVKEIACGGRHSAVV 304
G+ L V QGS + G + V IACGG HSA +
Sbjct: 95 GRFHTLAVTDSNKLYSFGQGSEGALGHGDETDLNMPTSIESLEDKDVNIIACGGYHSAAI 154
Query: 305 TDAGALLTFGWGLYGQ 320
T G L +G GQ
Sbjct: 155 TKNGELYIWGSNSEGQ 170
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
KDV CG + A +++G+L WGS + EGQ L K+ P L SV+ A
Sbjct: 139 KDVNIIACGGYHSAAITKNGELYIWGS-NSEGQLGL---KNDTISYPTMLDLGKSVISVA 194
Query: 111 AGWAHCVSVTEAGEVYTWGWRE 132
G+ H VT G++YT+G E
Sbjct: 195 CGYYHTAVVTADGKLYTFGETE 216
>gi|118396198|ref|XP_001030441.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila]
gi|89284744|gb|EAR82778.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila
SB210]
Length = 1984
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 65/234 (27%), Positives = 97/234 (41%), Gaps = 54/234 (23%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA--SVVKAAAGWA 114
CG+ ++A + +G ++ WG D S L G+ + PFP P A ++ + G
Sbjct: 1548 ACGYQHSVAITYAGTVLAWG---DNSHSQLGLGEKSPSSVPFPTPIPALTNIQSVSCGSE 1604
Query: 115 HCVSVTEAGEVYTWGWRE----------CVPSAKVTR-------DFGSAGSFQKDSTGKQ 157
H +++ G+V++WG E PS K+ DF G G
Sbjct: 1605 HTLALDYIGQVFSWGNGEGGLLGHGNEDVCPSPKIIEALKGLNVDFIVCG-------GLH 1657
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNP------- 210
S + T+ R+ S R E + FT C +T
Sbjct: 1658 SLVLTKN--------------RQVYSWGRNEGGQLGIDKKLFTNEKCYLTTPKRVKGNLE 1703
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT--PHLIPCL 262
GV + ++AAG H+L L+ GQV+GWGY GQ+GLG + P P LIP L
Sbjct: 1704 GVGVIQIAAGEAHSLALALNGQVYGWGYNMNGQIGLGMQTDTYPVYEPQLIPKL 1757
Score = 48.1 bits (113), Expect = 0.006, Method: Composition-based stats.
Identities = 65/267 (24%), Positives = 94/267 (35%), Gaps = 105/267 (39%)
Query: 70 GKLITWGSADDEGQSYLTSGKHGETPEP------------FP---LPTEASVVKAAA-GW 113
G + +WG T G+ G +P FP +P + ++V + A G+
Sbjct: 1500 GVMFSWGQN--------TEGQMGNVYDPKQNLLSKKIKVNFPKLIVPLKDTIVTSVACGY 1551
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H V++T AG V WG D++ Q L E++P
Sbjct: 1552 QHSVAITYAGTVLAWG----------------------DNSHSQLGL-GEKSP------- 1581
Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
S F T P L I V+ G HTL L +GQV
Sbjct: 1582 --------------------SSVPFPTPIPALTN------IQSVSCGSEHTLALDYIGQV 1615
Query: 234 WGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
+ WG G G LG G+ + P+P +I L+ +N V
Sbjct: 1616 FSWGNGEGGLLGHGNE-DVCPSPKIIEALK---------------GLN---------VDF 1650
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQ 320
I CGG HS V+T + ++G GQ
Sbjct: 1651 IVCGGLHSLVLTKNRQVYSWGRNEGGQ 1677
>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 108/271 (39%), Gaps = 47/271 (17%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHC 116
G ++A + +WG +D GQ L G + P P L T ++ G H
Sbjct: 26 GASHSVALLSGNIVCSWGRGED-GQ--LGHGDAEDRPTPTQLSTLDGLDIISITCGADHT 82
Query: 117 VSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPSD 169
S +E+ EVY+WGW DFG G F +L Q D
Sbjct: 83 TSYSESRMEVYSWGWG----------DFGRLGHGNSSDLFTPQPIKALHSLKIRQIACGD 132
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
+ S R ++ G +L P + GV I VAAG HT +++
Sbjct: 133 SHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTE 192
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
G+++GWG+G G LGLG R L+P +G D+ ++V
Sbjct: 193 DGELYGWGWGRYGNLGLGDR-----NDRLVPEKVSLVNG-DKMIMV-------------- 232
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
ACG RH+ V+ +G L T+GW YGQ
Sbjct: 233 -----ACGWRHTISVSSSGGLYTYGWSKYGQ 258
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 114/295 (38%), Gaps = 58/295 (19%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESG---KLITWGSADDEGQSYLTSGKHGE--TP 95
P P +L D D+ CG TS S ++ +WG D L G + TP
Sbjct: 59 PTPTQLSTLDG-LDIISITCGADHTTSYSESRMEVYSWGWGD---FGRLGHGNSSDLFTP 114
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
+P + + A G +HC++VT GEV +WG + T +DS
Sbjct: 115 QPIKALHSLKIRQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGT---------TEDSLV 165
Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCL 205
Q + AG E T++ E+ E N GD L P
Sbjct: 166 PQKIQAFQGVSIKMVAAGAE-----HTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEK 220
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
V+L G K+ VA G RHT+ +S G ++ +G+ GQLG G + TPH + L
Sbjct: 221 VSLVNGDKMIMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHL-TPHKVEALR-- 277
Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
SY+ I+ G RH+ +T G L +GW +GQ
Sbjct: 278 ----------------------DSYISMISGGWRHTMALTSDGNLYGWGWNKFGQ 310
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 120/317 (37%), Gaps = 62/317 (19%)
Query: 22 VYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSA 78
VY WG + S + +P P + + + G LA + G++ +WG
Sbjct: 92 VYSWGWGDFGRLGHGNSSDLFTPQPIKALHSLKIRQIACGDS-HCLAVTMDGEVQSWGR- 149
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ L + + P+ S+ AAG H +VTE GE+Y WGW
Sbjct: 150 NQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTEDGELYGWGWGR------ 203
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE----------E 188
+G+ G ++ +P + + + + R T S +
Sbjct: 204 ----YGNLGLGDRN----DRLVPEKVSLVNGDKMIMVACGWRHTISVSSSGGLYTYGWSK 255
Query: 189 SENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
GD L+P V I+ ++ G RHT+ L+ G ++GWG+ GQ+G+G
Sbjct: 256 YGQLGHGDFEDHLTPHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVGVGD 315
Query: 249 RIK-----MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
I V PH E A S + +I+CG RH+
Sbjct: 316 NIDHCSPVQVKFPH-----EQAHS-----------------------LVQISCGWRHTLA 347
Query: 304 VTDAGALLTFGWGLYGQ 320
+T+ + ++G G GQ
Sbjct: 348 ITERQNVFSWGRGTNGQ 364
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 80/224 (35%), Gaps = 32/224 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G A +E G+L WG G L PE L ++ A GW H +S
Sbjct: 183 GAEHTAAVTEDGELYGWGWGR-YGNLGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTIS 241
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAG--SFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
V+ +G +YT+GW + +G G F+ T P + D
Sbjct: 242 VSSSGGLYTYGWSK----------YGQLGHGDFEDHLT------PHKVEALRDSYISMIS 285
Query: 177 VKRRKTSSAREESE----------NPASGDEFFTLSPCLVTL--NPGVKITKVAAGGRHT 224
R T + + GD SP V + +++ G RHT
Sbjct: 286 GGWRHTMALTSDGNLYGWGWNKFGQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHT 345
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
L +++ V+ WG G GQLG G + P +I L SG
Sbjct: 346 LAITERQNVFSWGRGTNGQLGHGESMDR-NLPKIIEVLSADGSG 388
>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 439
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 113/267 (42%), Gaps = 59/267 (22%)
Query: 69 SGKLI-TWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVKAAAGWAHCVSVTE 121
SG ++ +WG +D GQ HG+T + LPT+ S +V G H ++ +E
Sbjct: 32 SGNVVCSWGRGED-GQL-----GHGDTDDRL-LPTQLSALDAQQIVSVVCGADHTLAYSE 84
Query: 122 AG-EVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPSDKRAGE 174
+ EVY+WGW DFG G F L +Q D
Sbjct: 85 SKVEVYSWGWG----------DFGRLGHGNSSDLFIPQPIRALQGLRIKQIACGDSHCLA 134
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
++ S R ++ G +L P + GV I VAAG H++ +++ G+++
Sbjct: 135 VTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELY 194
Query: 235 GWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
GWG+G G LGLG R + +P + C D+ +LV
Sbjct: 195 GWGWGRYGNLGLGDRNDRCIPEKVSVDC--------DKMVLV------------------ 228
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQ 320
ACG RH+ V+ +G L T+GW YGQ
Sbjct: 229 -ACGWRHTISVSSSGELYTYGWSKYGQ 254
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 112/288 (38%), Gaps = 38/288 (13%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P+K +P ++ G ++A +E+G+L WG G L
Sbjct: 163 PQKIQTFQGVPIKMVAA---------GAEHSVAITENGELYGWGWGR-YGNLGLGDRNDR 212
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
PE + + V+ A GW H +SV+ +GE+YT+GW + +G G
Sbjct: 213 CIPEKVSVDCDKMVL-VACGWRHTISVSSSGELYTYGWSK----------YGQLGH---- 257
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLS 202
K +P + SDK + R T + + GD S
Sbjct: 258 GDCKDHLVPHKLQAFSDKLICQVSGGWRHTMALTTGGQLYGWGWNKFGQVGVGDNVDRCS 317
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P V K+ +++ G RHT+ +++ V+ WG G GQLG+G I P +I L
Sbjct: 318 PVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGRGTNGQLGIGDTIDW-NYPKIIEAL 376
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGAL 310
+ G + + SGK S + A +A V ++G+L
Sbjct: 377 --SVDGSCGQHIESSNTDQLSGKTLASLAERYAVVPDEAAPVANSGSL 422
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 111/283 (39%), Gaps = 66/283 (23%)
Query: 55 VCGGGCGFALATSESG-KLITWGSADDEGQSYLTSGKHGETPEPF-PLPTEA----SVVK 108
VCG LA SES ++ +WG D HG + + F P P A + +
Sbjct: 73 VCGAD--HTLAYSESKVEVYSWGWGD------FGRLGHGNSSDLFIPQPIRALQGLRIKQ 124
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPP 167
A G +HC++VT GEV +WG + G G +DS Q + P
Sbjct: 125 IACGDSHCLAVTMEGEVQSWGRNQ----------NGQLGLGTTEDSLVPQKIQTFQGVPI 174
Query: 168 SDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKV 217
AG E + + E E N GD P V+++ K+ V
Sbjct: 175 KMVAAGAE-----HSVAITENGELYGWGWGRYGNLGLGDRNDRCIPEKVSVDCD-KMVLV 228
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
A G RHT+ +S G+++ +G+ GQLG G HL+P A S K
Sbjct: 229 ACGWRHTISVSSSGELYTYGWSKYGQLGHGD-----CKDHLVPHKLQAFSDK-------- 275
Query: 278 GSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +++ G RH+ +T G L +GW +GQ
Sbjct: 276 ------------LICQVSGGWRHTMALTTGGQLYGWGWNKFGQ 306
>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 513
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 111/294 (37%), Gaps = 91/294 (30%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHG--ETPEPFPLPTEASVVKAAAGWAHC 116
G G + SE G + TWG DD L G +G P +V+A G H
Sbjct: 48 GSGHTVVLSEDGAVYTWGRGDD---GRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHT 104
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+VT+ GE+YTWG G + K G +S PT
Sbjct: 105 AAVTDKGELYTWG----------------GGMYGKLGHGNESGHPT-------------- 134
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLV--TLNPGVKITKVAAGGRHTLILSDMGQVW 234
PC+V + G ++T++A G RHT++L+D+G+V+
Sbjct: 135 --------------------------PCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVY 168
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEH------AASGKDRPLLVRQGSVNS--SGKA 286
WG G +G + P ++ L+ AA G L G + + GK
Sbjct: 169 TWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKF 228
Query: 287 GR--------------------SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
GR V +ACGG HSA + D+G L T+G G +GQ
Sbjct: 229 GRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQ 282
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 60/136 (44%), Gaps = 27/136 (19%)
Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
R E GD P LV + +VA G HT++LS+ G V+ WG G +G+LG
Sbjct: 14 RGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLG 73
Query: 246 LGSR-IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
G K V P ++ LE G+ V+ CG H+A V
Sbjct: 74 HGDNGWKYV--PRIVEALE-----------------------GQRIVQA-TCGSYHTAAV 107
Query: 305 TDAGALLTFGWGLYGQ 320
TD G L T+G G+YG+
Sbjct: 108 TDKGELYTWGGGMYGK 123
>gi|344292741|ref|XP_003418084.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Loxodonta africana]
Length = 1100
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 109/264 (41%), Gaps = 87/264 (32%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G + A +E G+L WG + EGQ L S + P + S + + G+ H
Sbjct: 144 GANISAALTEDGELFMWGD-NSEGQIGLNSISNVYVPRQVTVGKPISWI--SCGYYHSAF 200
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
VT G++YT+G EC G G LP+EQ ++
Sbjct: 201 VTMEGKLYTFGEPEC----------GKLG------------LPSEQ-----------LIN 227
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGV--KITKVAAGGRHTLILSDMGQVWGW 236
RK P LV+ G+ K+ +VA GG HT++L++ V+ +
Sbjct: 228 HRK---------------------PQLVS---GISEKVIQVACGGGHTVVLTEKA-VYTF 262
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G G GQLGLGS I P P + LEH K ++ I+C
Sbjct: 263 GQGRFGQLGLGSFIFQAPEPAI---LEHVKDQK---------------------IRHISC 298
Query: 297 GGRHSAVVTDAGALLTFGWGLYGQ 320
G H+A++TD G + TFG G +G+
Sbjct: 299 GENHTALITDVGHMYTFGDGRHGK 322
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 54/140 (38%), Gaps = 30/140 (21%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVP 254
P V K+ A G HTL+ ++ G V+ G EGQLGLG I
Sbjct: 74 PICVKALKSEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNSFHLISFFT 133
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------I 294
+ H I L +A L G + NS G+ G + + I
Sbjct: 134 SRHKIKQL--SAGANISAALTEDGELFMWGDNSEGQIGLNSISNVYVPRQVTVGKPISWI 191
Query: 295 ACGGRHSAVVTDAGALLTFG 314
+CG HSA VT G L TFG
Sbjct: 192 SCGYYHSAFVTMEGKLYTFG 211
>gi|307168816|gb|EFN61765.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
Length = 538
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 123/325 (37%), Gaps = 102/325 (31%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + K+ VY G G S S + LC D CG G LA
Sbjct: 34 NEALLVMKDKSVYGLGNNIAGCLGISDAHSTLYPKKIEVLCDKDIKTFACGSG-PHVLAL 92
Query: 67 SESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEAS------VVKAAAGWAHC 116
+E G++ +WG SY G G TP +PT + +V A G H
Sbjct: 93 TEKGEVYSWGH-----NSYCELGNGTCNQGLTPILVNIPTLGAGLNMKCIVDVACGSHHS 147
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++TE GEVY WG C G GS + T Q P
Sbjct: 148 LALTEEGEVYAWGQNNC----------GQVGS----------NISTNQGSP--------- 178
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
R+ + N A G KI ++ G +++++D G+V+GW
Sbjct: 179 ---------RQVTSNLA-----------------GKKIVHISCGQTSSMVVTDNGEVYGW 212
Query: 237 GYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
GY G GQLG+G+ + +M P+ R GS+ G +K +A
Sbjct: 213 GYNGVGQLGIGNYVNQMTPS--------------------RVGSL-----IGVVIIK-VA 246
Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQ 320
CG H+ ++D G L +G YGQ
Sbjct: 247 CGYAHTLALSDEGKLYVWGGNSYGQ 271
>gi|426248720|ref|XP_004018107.1| PREDICTED: RCC1 domain-containing protein 1 [Ovis aries]
Length = 307
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 93/197 (47%), Gaps = 39/197 (19%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL +G++ +WG+ G+HG+ PEP P EA + +
Sbjct: 97 GAEHALLLDAAGQVFSWGA-----------GRHGQLGHGTLEPEPEPRLLEALQGLRMAE 145
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V ++E G++Y WGW E A T+ G K + G+ S L +
Sbjct: 146 VAAGGWHSVCLSETGDIYIWGWNESGQLALPTKSLAEDG---KTTAGEASGLDED----- 197
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
G EV ++ S+ + + P + F P L+ L+PG + KV+ G RHT +L+
Sbjct: 198 ----GSEV---KRVSAGEDGAPAPFIAVQPF---PALLDLSPGSEAVKVSCGSRHTAVLT 247
Query: 229 DMGQVWGWGYGGEGQLG 245
G+++ WG+G GQLG
Sbjct: 248 RTGELYTWGWGKYGQLG 264
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 31/140 (22%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL---------------- 246
P L+ G+++ +VAAGG H++ LS+ G ++ WG+ GQL L
Sbjct: 132 PRLLEALQGLRMAEVAAGGWHSVCLSETGDIYIWGWNESGQLALPTKSLAEDGKTTAGEA 191
Query: 247 ------GSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
GS +K V G P + Q + S +++CG RH
Sbjct: 192 SGLDEDGSEVKRVSA---------GEDGAPAPFIAVQPFPALLDLSPGSEAVKVSCGSRH 242
Query: 301 SAVVTDAGALLTFGWGLYGQ 320
+AV+T G L T+GWG YGQ
Sbjct: 243 TAVLTRTGELYTWGWGKYGQ 262
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 42/165 (25%)
Query: 183 SSAREESENPASGDE----FFTLSPC-----------LVTLNPGVKITKVAAGGRHTLIL 227
S A +E+E+ + DE L PC L P ++ ++ G H L+L
Sbjct: 45 SHAVQEAEHGPNRDETQAGLLPLLPCARAYVSPRPSFYRPLAPTLRARRLELGAEHALLL 104
Query: 228 SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAG 287
GQV+ WG G GQLG G+ ++ P P L+ L+
Sbjct: 105 DAAGQVFSWGAGRHGQLGHGT-LEPEPEPRLLEALQGL---------------------- 141
Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQRM--AKCLAGDG 330
+ E+A GG HS +++ G + +GW GQ K LA DG
Sbjct: 142 --RMAEVAAGGWHSVCLSETGDIYIWGWNESGQLALPTKSLAEDG 184
>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
Length = 437
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 109/272 (40%), Gaps = 49/272 (18%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHC 116
G ++A + TWG +D GQ L G + P L T ++ G H
Sbjct: 22 GASHSVALLSGNVVCTWGRGED-GQ--LGHGDAQDRLSPTILSTLEGLEIISVICGADHT 78
Query: 117 VSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPSD 169
++ +E+ +VY+WGW DFG G F + L +Q D
Sbjct: 79 IAYSESHTDVYSWGWG----------DFGRLGHGNSSDLFTPQPIRQLHGLKIKQIACGD 128
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
++ + S R ++ G +L P + GV I VAAG HT +++
Sbjct: 129 SHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTE 188
Query: 230 MGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
G+++GWG+G G LGLG R ++VP +P E
Sbjct: 189 DGELYGWGWGRYGNLGLGDRKDRLVPEKVSLPHGEKMVM--------------------- 227
Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ACG RH+ V+ +G L T+GW YGQ
Sbjct: 228 -----VACGWRHTISVSSSGGLYTYGWSKYGQ 254
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 119/296 (40%), Gaps = 58/296 (19%)
Query: 39 LSP-IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TP 95
LSP I + L G + +CG A + S + + +WG D L G + TP
Sbjct: 55 LSPTILSTLEGLEIISVICGADHTIAYSESHT-DVYSWGWGD---FGRLGHGNSSDLFTP 110
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDST 154
+P + + A G +HC++VT G+V +WG + G G +DS
Sbjct: 111 QPIRQLHGLKIKQIACGDSHCLAVTMEGQVQSWGRNQN----------GQLGLGTTEDSL 160
Query: 155 GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPC 204
Q + P AG E T++ E+ E N GD L P
Sbjct: 161 VPQKIQAFQGVPIKMVAAGAE-----HTAAVTEDGELYGWGWGRYGNLGLGDRKDRLVPE 215
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
V+L G K+ VA G RHT+ +S G ++ +G+ GQLG G HLIP
Sbjct: 216 KVSLPHGEKMVMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDY-----ADHLIPHQLE 270
Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
A G S++ +I+ G RH+ VT G L +GW +GQ
Sbjct: 271 ALQG--------------------SFISQISGGWRHTMAVTSDGKLYGWGWNKFGQ 306
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 120/315 (38%), Gaps = 54/315 (17%)
Query: 19 ETVVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
T VY WG + S + +P P R G K + G LA + G++ +W
Sbjct: 85 HTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIACGDS-HCLAVTMEGQVQSW 143
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP 135
G + GQ L + + P+ + AAG H +VTE GE+Y WGW
Sbjct: 144 GR-NQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTEDGELYGWGWGR--- 199
Query: 136 SAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE-------- 187
+G+ G + K +P + + P ++ R T S
Sbjct: 200 -------YGNLGLGDR----KDRLVPEKVSLPHGEKMVMVACGWRHTISVSSSGGLYTYG 248
Query: 188 --ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
+ GD L P + G I++++ G RHT+ ++ G+++GWG+ GQ+G
Sbjct: 249 WSKYGQLGHGDYADHLIPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVG 308
Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+G + + LE V I+CG RH+ VT
Sbjct: 309 VGDNVDRSSPVQVKLPLEQK-------------------------VILISCGWRHTLAVT 343
Query: 306 DAGALLTFGWGLYGQ 320
+ + ++G G GQ
Sbjct: 344 ERQNVFSWGRGTNGQ 358
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 82/221 (37%), Gaps = 26/221 (11%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P+K +P ++ G A +E G+L WG G L K
Sbjct: 162 PQKIQAFQGVPIKMVAA---------GAEHTAAVTEDGELYGWGWGR-YGNLGLGDRKDR 211
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
PE LP +V A GW H +SV+ +G +YT+GW + +G G
Sbjct: 212 LVPEKVSLPHGEKMVMVACGWRHTISVSSSGGLYTYGWSK----------YGQLGHGDYA 261
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR------EESENPASGDEFFTLSPCLV 206
L Q + +G TS + + GD SP V
Sbjct: 262 DHLIPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDRSSPVQV 321
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
L K+ ++ G RHTL +++ V+ WG G GQLG G
Sbjct: 322 KLPLEQKVILISCGWRHTLAVTERQNVFSWGRGTNGQLGNG 362
>gi|403353075|gb|EJY76071.1| hypothetical protein OXYTRI_02425 [Oxytricha trifallax]
Length = 794
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 125/309 (40%), Gaps = 74/309 (23%)
Query: 22 VYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWG-- 76
V+ WG L EK+ R+ G K + CG ++A G++ +WG
Sbjct: 281 VFAWGGTLHKKVGEKNAQAQNNEPRIVSGLQGKQIVHIDCGDFHSVALDIQGRVYSWGGG 340
Query: 77 -SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSV-TEAGEVYTWG---WR 131
++ ++GQ + + E P +V+ +AG H +++ E E+Y WG +
Sbjct: 341 GASYNKGQCGHGNNEDIEQPIQVQGIAHRKIVQISAGGFHTLALCEEDNELYAWGSGTYG 400
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN 191
EC G FQ S K +VK K + +E
Sbjct: 401 EC-----------GLGEFQASSKPK-------------------IVKMPKDFVSNQEMNQ 430
Query: 192 PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
+ F + P IT+++AGG HTL+L+ G+V+ +GYG GQLGL S K
Sbjct: 431 MQNEFAFSSQKPL---------ITQISAGGHHTLLLTSRGRVYSFGYGSHGQLGLRS-TK 480
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
+P L+ + LL + +K IA G HS +++D G L
Sbjct: 481 NFCSPQLV-----------KDLLSKN-------------IKAIAAGWNHSLILSDKGDLF 516
Query: 312 TFGWGLYGQ 320
G+G +GQ
Sbjct: 517 ACGYGNHGQ 525
>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 669
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 130/336 (38%), Gaps = 65/336 (19%)
Query: 39 LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG--ETPE 96
+SP+ + G S + VC GG A+ T + G++ TWG G L G E+P
Sbjct: 260 VSPVVVQGLLGLSVQQVCCGGQHAAVLT-DCGEIFTWGRG---GFGRLGHGNREGLESPR 315
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
V+ A G+A+ +VT +GE+YTWG E G + + +
Sbjct: 316 RIEALEGIPCVQVACGFAYTAAVTASGELYTWGAGE-------NGRLGLGDVADRHTPSR 368
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG----- 211
L ++ V+ R T A + E GD L P L+ G
Sbjct: 369 VEGLHSKVKEVYAGSVHSCVLTREGTVYAFGKHEYTGHGDHEDVLDPRLIPTFSGGSGAL 428
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM---------VPTPHLIPCL 262
V+ V GG HT+ L+ GQV+ WG+ QLG+G+ + +P+P L+ L
Sbjct: 429 VRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESL 488
Query: 263 -------------EHAASGKDRPLLV----RQGSV----------NSSG----------- 284
AA D L V QG + N G
Sbjct: 489 VGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLID 548
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +K+IACGG HS V + G + +FG G GQ
Sbjct: 549 RLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQ 584
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 81/209 (38%), Gaps = 69/209 (33%)
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ 164
++VK AGW H ++T G++Y G R++ Q L + Q
Sbjct: 492 NIVKVVAGWGHSAALTVDGQLYVCG-----------RNYQG-----------QLGLGSPQ 529
Query: 165 APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
P ++R +P F CL+ +KI ++A GG H+
Sbjct: 530 GFPQNERG------------------HP------FQADFCLIDRLQHLKIKQIACGGEHS 565
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
+ +++ G+VW +G G +GQLG S + +D P LV+ +
Sbjct: 566 VAVAENGEVWSFGAGQKGQLGHESTTR-----------------EDFPRLVQ------AL 602
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTF 313
K+ R + +ACG + V+ A T
Sbjct: 603 KSTRREIMHVACGNNCTLVLAGGVAFPTL 631
>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Metaseiulus occidentalis]
Length = 1152
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 77/295 (26%), Positives = 108/295 (36%), Gaps = 100/295 (33%)
Query: 59 GCGFALATSESGKLITWGSADDE--GQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G L + G++++ GS D + GQ T+ PEP +V+ G H
Sbjct: 59 GAHHTLVLTSHGRVLSCGSNDHDQLGQEVSTT-----KPEPVTALQCLRIVQVCCGQQHS 113
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++TEAG+VY W GS K G GE
Sbjct: 114 MALTEAGQVYMW------------------GSNSKGQLGN----------------GEGQ 139
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLV-TLNPGVKITKVAAGGRHTLILSDMGQVWG 235
R LSP V TL P + ++A G H L L + G ++
Sbjct: 140 ESR---------------------LSPRFVKTLAP-FTVVQIACGSNHCLALLNNGALYA 177
Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPC---------LEHAASGKDRPLLVRQGSV------ 280
WG G GQLG+G+ V P +P L A G + +++ + V
Sbjct: 178 WGDNGNGQLGIGT----VGEPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGS 233
Query: 281 NSSGKAGRS-----------------YVKEIACGGRHSAVVTDAGALLTFGWGLY 318
N G+ G S +VK IA GG HSA +T G + TFGW Y
Sbjct: 234 NRFGQLGLSDNKDRAFPTLLKTLRQQHVKFIAAGGAHSAALTAHGGVFTFGWSFY 288
Score = 62.0 bits (149), Expect = 4e-07, Method: Composition-based stats.
Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G ++ S+SG + WGS + GQ L+ K P + V AAG AH +
Sbjct: 215 GANHSMVLSKSGVIFVWGS-NRFGQLGLSDNKDRAFPTLLKTLRQQHVKFIAAGGAHSAA 273
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD-KRAGEEVV 177
+T G V+T+GW SF + + S TE P S R ++
Sbjct: 274 LTAHGGVFTFGW-----------------SFYESHEVRISLRGTESNPQSALARKLFSLI 316
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGW 236
+R + G + L+P + G IT++A G HT+ + +G+V+ +
Sbjct: 317 EREFCRHSYGSYGQLGHGSKNDQLTPMKIQELMGTTITQIALGRCHTVCYAPTVGKVFTF 376
Query: 237 GYGGEGQLGLGSRIKMVPTP 256
G GG GQ LGS + MV TP
Sbjct: 377 GLGGNGQ--LGSSVSMVSTP 394
Score = 58.5 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 29/155 (18%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G E T P VT ++I +V G +H++ L++ GQV+ WG +GQLG G +
Sbjct: 84 GQEVSTTKPEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGEGQESRL 143
Query: 255 TPHLIPCLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRSYVKE---------- 293
+P + L A G + L L+ G++ N +G+ G V E
Sbjct: 144 SPRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWGDNGNGQLGIGTVGEPQRVPVEVTN 203
Query: 294 --------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
IACG HS V++ +G + +G +GQ
Sbjct: 204 LLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQ 238
Score = 40.8 bits (94), Expect = 0.93, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 55/133 (41%), Gaps = 30/133 (22%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLE--HAAS 267
G+++ ++A G HTL+L+ G+V G QLG S K P L CL
Sbjct: 50 GIRVRQIATGAHHTLVLTSHGRVLSCGSNDHDQLGQEVSTTKPEPVTAL-QCLRIVQVCC 108
Query: 268 GKDRPL-LVRQGSV-----NSSGKAGRS----------YVK--------EIACGGRHSAV 303
G+ + L G V NS G+ G +VK +IACG H
Sbjct: 109 GQQHSMALTEAGQVYMWGSNSKGQLGNGEGQESRLSPRFVKTLAPFTVVQIACGSNHCLA 168
Query: 304 VTDAGALLTFGWG 316
+ + GAL + WG
Sbjct: 169 LLNNGAL--YAWG 179
>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
magnipapillata]
Length = 725
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 104/264 (39%), Gaps = 82/264 (31%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG ++ SE G + WG+ ++EGQ L G+ E P L + VV + G+ H
Sbjct: 148 ACGTYHSIILSEDGDVYVWGN-NNEGQ--LGLGEEVENSLPKKLKFKKEVVSVSCGYYHT 204
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
VT G +YT+G E G + S ++T QS
Sbjct: 205 ALVTRDGFLYTFGENELGK-------LGLSSSQLSNTTVPQSVAM--------------- 242
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
PA DE+ + V+ G RHT+ ++ G + W
Sbjct: 243 ---------------PADNDEYIS----------------VSCGARHTVAITKQGHCYAW 271
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G G +GQLG G+++ V P I L SG+ S ++C
Sbjct: 272 GDGSQGQLGHGTKLLEVNEPKQIKKL--------------------SGQKCIS----VSC 307
Query: 297 GGRHSAVVTDAGALLTFGWGLYGQ 320
G H+AVVT++G + TFG G +G+
Sbjct: 308 GESHTAVVTESGKVFTFGDGRHGK 331
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 51/225 (22%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
VV+ A G H VTE+G +Y +G + D+G G S K P+
Sbjct: 40 VVEMACGDEHSAVVTESGRLYVFG----------SNDWGQLGLGHTKSLNK----PSFVK 85
Query: 166 PPSDKRAGEEVVKRRKTSSAREE--------SENPASG--DEFFTLSPCLVTLNPGVKIT 215
P ++ + R T E +E+ G D+ L P + P ++I
Sbjct: 86 PLKPEKVRKVACGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIK 145
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
++A G H++ILS+ G V+ WG EGQLGLG ++ + +P + L
Sbjct: 146 QIACGTYHSIILSEDGDVYVWGNNNEGQLGLGEEVE-----NSLP----------KKLKF 190
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
++ V+ ++CG H+A+VT G L TFG G+
Sbjct: 191 KKEVVS------------VSCGYYHTALVTRDGFLYTFGENELGK 223
>gi|307199126|gb|EFN79836.1| X-linked retinitis pigmentosa GTPase regulator [Harpegnathos
saltator]
Length = 694
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 107/262 (40%), Gaps = 81/262 (30%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G ++A + G +I WGS + EGQ L G G +P +P V + +AG+ H
Sbjct: 132 GSHHSMALTSDGGVIAWGS-NLEGQLGL-PGISGLVNKPTKVPIPEPVKEISAGYYHSAL 189
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+TE+G VY G E S K+ D +F KQ LP
Sbjct: 190 LTESGLVYVCGESE---SGKLGIDV----NFSTQVAPKQMQLP----------------- 225
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
+P L VA GG HTL+L++ G ++ G
Sbjct: 226 -----------------------APAL----------HVACGGHHTLVLAENGNIYCSGS 252
Query: 239 GGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
GQLG+G+ + V TP L+P +G++ S + +I+CG
Sbjct: 253 NASGQLGMGTNVSEVHTPKLLP----------------RGALQS------EIIVKISCGE 290
Query: 299 RHSAVVTDAGALLTFGWGLYGQ 320
HSA++T++G L T G G +G+
Sbjct: 291 SHSAILTESGKLFTCGDGRHGK 312
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 55/135 (40%), Gaps = 25/135 (18%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI----PCLEHAA 266
G +I +VAAG H++ L+ G V WG EGQLGL +V P + P E +A
Sbjct: 123 GSRILQVAAGSHHSMALTSDGGVIAWGSNLEGQLGLPGISGLVNKPTKVPIPEPVKEISA 182
Query: 267 SGKDRPLLVRQGSV-----NSSGKAGRSY----------------VKEIACGGRHSAVVT 305
LL G V + SGK G +ACGG H+ V+
Sbjct: 183 GYYHSALLTESGLVYVCGESESGKLGIDVNFSTQVAPKQMQLPAPALHVACGGHHTLVLA 242
Query: 306 DAGALLTFGWGLYGQ 320
+ G + G GQ
Sbjct: 243 ENGNIYCSGSNASGQ 257
>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
domestica]
Length = 1051
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 68/264 (25%), Positives = 102/264 (38%), Gaps = 82/264 (31%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D + T+ P + +++ + G HC
Sbjct: 91 ACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHC 150
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG G G GK+ P++ +P
Sbjct: 151 MALAADGQFFTWGQNR----------HGQLG------LGKE--FPSQASP---------- 182
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+R K+ G+ + +VAAGG H+ LS G V+GW
Sbjct: 183 -QRVKSLE--------------------------GIPLAQVAAGGAHSFALSLSGAVFGW 215
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G GQLGL T PC H LL Q V I+C
Sbjct: 216 GRNNAGQLGLSDE-----TDRQSPC--HVK------LLRTQKVV------------YISC 250
Query: 297 GGRHSAVVTDAGALLTFGWGLYGQ 320
G H+AV+T +G + TFG G +GQ
Sbjct: 251 GEEHTAVLTKSGGVFTFGAGSFGQ 274
Score = 50.8 bits (120), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 24/107 (22%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
I VA G H+L LSD GQ++ WG G +GQLG + V P LI
Sbjct: 87 IIHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIK------------- 133
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
K + + +++CG H + G T+G +GQ
Sbjct: 134 -----------KLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQ 169
>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
[Sarcophilus harrisii]
Length = 638
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 133/333 (39%), Gaps = 80/333 (24%)
Query: 25 WGY----LPG--TSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGS 77
WGY PG +S + + P S K+V CGG L E G++ T GS
Sbjct: 4 WGYWSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLL--EDGEVYTCGS 61
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
+ +GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 62 -NTKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGA------- 111
Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
GS G +T A+P K+ ++++ + S A+ +
Sbjct: 112 ------GSDGQLGHTTTEDSVAIPR-----LIKKLNQQMI--LQVSCGNWHCMALAADGQ 158
Query: 198 FFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
FFT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 159 FFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRN 218
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
GQLGL T PC LL Q V I+CG
Sbjct: 219 NAGQLGLSDE-----TDRQSPC--------HVKLLRTQKVV------------YISCGEE 253
Query: 300 HSAVVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
H+AV+T +G + TFG G +GQ L D +N
Sbjct: 254 HTAVLTKSGGVFTFGAGSFGQ-----LGHDSMN 281
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 106/271 (39%), Gaps = 31/271 (11%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+ + CG +LA S+ G+L +WG+ D + T+ P + +++ +
Sbjct: 85 QHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVS 144
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G HC+++ G+ +TWG + ++F S S Q+ +P Q
Sbjct: 145 CGNWHCMALAADGQFFTWGQNRH-GQLGLGKEFPSQASPQR--VKSLEGIPLAQVAAGGA 201
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
+ + R + DE SPC V L K+ ++ G HT +L+
Sbjct: 202 HSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKS 261
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
G V+ +G G GQLG S V R +L G S
Sbjct: 262 GGVFTFGAGSFGQLGHDSMNDEV---------------NPRRVLELMG----------SE 296
Query: 291 VKEIACGGRHS-AVVTDAGALLTFGWGLYGQ 320
V +IACG +H+ A V +G + FG G GQ
Sbjct: 297 VTQIACGRQHTLAFVPSSGLIYAFGCGARGQ 327
>gi|260826736|ref|XP_002608321.1| hypothetical protein BRAFLDRAFT_125491 [Branchiostoma floridae]
gi|229293672|gb|EEN64331.1| hypothetical protein BRAFLDRAFT_125491 [Branchiostoma floridae]
Length = 364
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 102/230 (44%), Gaps = 48/230 (20%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSAD 79
+ M G + T+P +P+P L G+ K VC CG +LA + SG++ +WG+
Sbjct: 144 ITMLGDVQSTNP------TPLPVYL--GEKVKAVC---CGKEHSLALTLSGRVFSWGNGS 192
Query: 80 DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKV 139
GQ + + TP+ ++V AAG H VSV+ G++Y WGW E
Sbjct: 193 -RGQLGHGTTEASNTPQVIEALEGVTMVTIAAGGWHSVSVSAFGDLYVWGWNE------- 244
Query: 140 TRDFGSAGSFQKDSTGKQSALPT--EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
Q LPT + PSD + S + +N A +
Sbjct: 245 ---------------AGQLGLPTSKHKTGPSDHKP--------SISEMGHQGDNVA--EV 279
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
+P +V + G +++KV+ G RHT L+ GQ+ WG+G GQLG G
Sbjct: 280 LVQATPTIVDMPAGQEVSKVSCGSRHTAALTRDGQLLTWGWGAYGQLGNG 329
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTPHLIP 260
+P ++ GV + +AAGG H++ +S G ++ WG+ GQLGL S+ K P+ H
Sbjct: 206 TPQVIEALEGVTMVTIAAGGWHSVSVSAFGDLYVWGWNEAGQLGLPTSKHKTGPSDHKPS 265
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
E G + ++ Q + V +++CG RH+A +T G LLT+GWG YGQ
Sbjct: 266 ISEMGHQGDNVAEVLVQATPTIVDMPAGQEVSKVSCGSRHTAALTRDGQLLTWGWGAYGQ 325
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 52/119 (43%), Gaps = 25/119 (21%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P + + G K+ V G H+L L+ G+V+ WG G GQLG G+ + TP +I
Sbjct: 154 NPTPLPVYLGEKVKAVCCGKEHSLALTLSGRVFSWGNGSRGQLGHGT-TEASNTPQVIEA 212
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
LE G + V IA GG HS V+ G L +GW GQ
Sbjct: 213 LE-----------------------GVTMVT-IAAGGWHSVSVSAFGDLYVWGWNEAGQ 247
>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
Length = 1054
Score = 72.4 bits (176), Expect = 3e-10, Method: Composition-based stats.
Identities = 85/322 (26%), Positives = 127/322 (39%), Gaps = 78/322 (24%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 8 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 64
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 65 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 113
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 114 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 162
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
FT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 163 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 222
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGG 298
GQLGL KDR P V+ V I+CG
Sbjct: 223 AGQLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGE 255
Query: 299 RHSAVVTDAGALLTFGWGLYGQ 320
H+AV+T +G + TFG G GQ
Sbjct: 256 EHTAVLTKSGGVFTFGAGSCGQ 277
>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 441
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 113/275 (41%), Gaps = 55/275 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA------AAG 112
G +A + +WG +D GQ HG+T + PLPT+ S + A A G
Sbjct: 22 GASHTVALLSGNVVCSWGRGED-GQL-----GHGDTDDR-PLPTQLSALDAQHIDSIACG 74
Query: 113 WAHCVSVTEA-GEVYTWGWRECVPSAKVTRDFGSAGSFQKDS------TGKQSALPTEQA 165
H ++ +E+ E+Y+WGW DFG G L +Q
Sbjct: 75 ADHTLAYSESRNELYSWGWG----------DFGRLGHGNSSDLLIPQPIIALQGLRIKQI 124
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
D ++ S R ++ G+ +L P + GV I VAAG H++
Sbjct: 125 ACGDSHCLAVTMEGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGVPIKMVAAGAEHSV 184
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
+++ G+++GWG+G G LGLG R DR + SV+
Sbjct: 185 AITENGELYGWGWGRYGNLGLGDR-------------------NDRWNPEKVSSVDC--- 222
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +ACG RH+ V+ +G + T+GW YGQ
Sbjct: 223 ---DKMVMVACGWRHTISVSSSGGIYTYGWSKYGQ 254
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 105/274 (38%), Gaps = 37/274 (13%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P+K +P ++ G ++A +E+G+L WG G L
Sbjct: 162 PQKIQAFKGVPIKMVAA---------GAEHSVAITENGELYGWGWGR-YGNLGLGDRNDR 211
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
PE +V A GW H +SV+ +G +YT+GW + +G G
Sbjct: 212 WNPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYTYGWSK----------YGQLGH---- 257
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR----------EESENPASGDEFFTLS 202
+ S +P + SDK + R + + + GD S
Sbjct: 258 GNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCS 317
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P V ++ +++ G RHT+ +++ V+ WG G GQLG G I +P +I L
Sbjct: 318 PVQVKFPQDQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTIDR-NSPKIIEAL 376
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
+ G P + + SGK+G S + A
Sbjct: 377 --SVDGSAGPHIESSNTDLLSGKSGVSLSERYAV 408
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 113/294 (38%), Gaps = 56/294 (19%)
Query: 41 PIPARLCGGDSWK-DVCGGGCGFALATSES-GKLITWGSADDEGQSYLTSGKHGE--TPE 96
P+P +L D+ D G LA SES +L +WG D L G + P+
Sbjct: 55 PLPTQLSALDAQHIDSIACGADHTLAYSESRNELYSWGWGD---FGRLGHGNSSDLLIPQ 111
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
P + + A G +HC++VT GEV +WG + G + +DS
Sbjct: 112 PIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQ-------NGQLGLGNT--EDSLVP 162
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLV 206
Q + P AG E + + E E N GD +P V
Sbjct: 163 QKIQAFKGVPIKMVAAGAE-----HSVAITENGELYGWGWGRYGNLGLGDRNDRWNPEKV 217
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA 266
+ K+ VA G RHT+ +S G ++ +G+ GQLG G+ L+P A
Sbjct: 218 SSVDCDKMVMVACGWRHTISVSSSGGIYTYGWSKYGQLGHGNF-----EDSLVPQKLQAL 272
Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
S K + +++ G RHS +T G L +GW +GQ
Sbjct: 273 SDK--------------------LISQVSGGWRHSMALTSTGLLFGWGWNKFGQ 306
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 26/113 (23%)
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
+P ++ ++AG HT+ L V WG G +GQLG G
Sbjct: 11 SPPSRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDT------------------- 51
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA-GALLTFGWGLYGQ 320
DRPL + ++++ ++ IACG H+ +++ L ++GWG +G+
Sbjct: 52 DDRPLPTQLSALDA------QHIDSIACGADHTLAYSESRNELYSWGWGDFGR 98
>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Pan paniscus]
gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Gorilla gorilla gorilla]
gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
Full=HECT domain and RCC1-like domain-containing protein
3
gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
Length = 1050
Score = 72.0 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 85/322 (26%), Positives = 127/322 (39%), Gaps = 78/322 (24%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
FT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGG 298
GQLGL KDR P V+ V I+CG
Sbjct: 219 AGQLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGE 251
Query: 299 RHSAVVTDAGALLTFGWGLYGQ 320
H+AV+T +G + TFG G GQ
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQ 273
>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Anolis carolinensis]
Length = 1060
Score = 72.0 bits (175), Expect = 4e-10, Method: Composition-based stats.
Identities = 79/292 (27%), Positives = 110/292 (37%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKRPEQVGALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG F + G Q LP
Sbjct: 97 LTLNDKGQVYAWG-------------FAADG---------QLGLP--------------- 119
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
G E +T P + V+I +VA G H+L LS +V+ W
Sbjct: 120 ------------------GTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCL------EHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG +K +P LI L + AA G L G+V N G+
Sbjct: 162 GQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQ 221
Query: 286 AGRS-----YVKE------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + YV I+CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 65/275 (23%), Positives = 109/275 (39%), Gaps = 39/275 (14%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A L ++ G++ WG A D + ++ P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK--QSAL--PTEQAP 166
G+ H +++++ EV++WG + G +K ++ + +S L P Q
Sbjct: 144 CGYYHSLALSKGSEVFSWGQNK-------HGQLGLGYDLKKQTSPQLIKSLLGIPFGQIA 196
Query: 167 PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
+ + R + DE P L+ KI ++ G HT
Sbjct: 197 AGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAA 256
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
L+ G V+ +G GG GQLG S T H I R + G++
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNS------TGHEI---------NPRKVFELMGNI------ 295
Query: 287 GRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V G + +FG G GQ
Sbjct: 296 ----VTQIACGRQHTSAFVPSTGRIYSFGLGGNGQ 326
>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Anolis carolinensis]
Length = 1052
Score = 72.0 bits (175), Expect = 4e-10, Method: Composition-based stats.
Identities = 79/292 (27%), Positives = 110/292 (37%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKRPEQVGALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG F + G Q LP
Sbjct: 97 LTLNDKGQVYAWG-------------FAADG---------QLGLP--------------- 119
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
G E +T P + V+I +VA G H+L LS +V+ W
Sbjct: 120 ------------------GTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCL------EHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG +K +P LI L + AA G L G+V N G+
Sbjct: 162 GQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQ 221
Query: 286 AGRS-----YVKE------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + YV I+CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 65/275 (23%), Positives = 109/275 (39%), Gaps = 39/275 (14%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A L ++ G++ WG A D + ++ P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK--QSAL--PTEQAP 166
G+ H +++++ EV++WG + G +K ++ + +S L P Q
Sbjct: 144 CGYYHSLALSKGSEVFSWGQNK-------HGQLGLGYDLKKQTSPQLIKSLLGIPFGQIA 196
Query: 167 PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
+ + R + DE P L+ KI ++ G HT
Sbjct: 197 AGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAA 256
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
L+ G V+ +G GG GQLG S T H I R + G++
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNS------TGHEI---------NPRKVFELMGNI------ 295
Query: 287 GRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V G + +FG G GQ
Sbjct: 296 ----VTQIACGRQHTSAFVPSTGRIYSFGLGGNGQ 326
>gi|66817532|ref|XP_642619.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60470703|gb|EAL68677.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 849
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 114/263 (43%), Gaps = 37/263 (14%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
GG F+ A ++SG+L TWG +++GQ L + TP+ + ++V G H
Sbjct: 217 VSGGWAFSAAVTKSGRLYTWG-FNEKGQLGLGNRWFHSTPQLVKTLIDVNIVSVVCGRQH 275
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-----SFQKDSTGKQSALPTEQAPPSDK 170
++T+ GEVY+WG FG G S+ +Q E+
Sbjct: 276 ICAITDQGEVYSWGLGV----------FGQLGHGNVKSYLHPKKIQQFVELNERIAQVAC 325
Query: 171 RAGEEVVKRRK------------TSSAREESENPASG--DEFFTLS-PCLVTLNPGVKIT 215
+ +V+ + + EE+++ G D F S P +V KI
Sbjct: 326 GSNFTMVRSVQGLLYAFGHGEYGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSLETKKIK 385
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL--EHAAS---GKD 270
VA G HT++++D +V+ WG+G G LGLG++ + P LI L E AS G+
Sbjct: 386 NVACGHLHTIVVTDENEVYQWGWGSSGALGLGNK-RFQLVPQLITSLSGEEIASITAGEK 444
Query: 271 RPLLVRQGSVNSSGKAGRSYVKE 293
++VR V S +S + E
Sbjct: 445 HTIVVRCSDVTSFAYDYKSLINE 467
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 44/280 (15%)
Query: 59 GCGFALATSESGKLITWGSADD----EGQSYLTSGKHGETPEPFPLPT--EASVVKAAAG 112
G +LA S G + +WG + + GQ Y S K +P + + ++K A G
Sbjct: 42 GEAHSLAVSRFGDVYSWGRSKEGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIKVACG 101
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG--------SFQKDSTGKQSALPTEQ 164
H +++T+ G+VY WG + ++ + D S S Q+ S + +
Sbjct: 102 NFHSLALTDMGKVYEWGQLHRLDESQSSLDIQSTNGLIEMPRLSSQRIIEASVSQYLSGE 161
Query: 165 APPSDKRAG----EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
D G ++ + ++SA+ +S++ + P + P ++ V+ G
Sbjct: 162 KKAYDANGGTKPKDDDEDKEASNSAQSKSKHLGKIIDLNQTIPMQIQDIPE-EVVDVSGG 220
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
+ ++ G+++ WG+ +GQLGLG+R TP L+ L V
Sbjct: 221 WAFSAAVTKSGRLYTWGFNEKGQLGLGNRW-FHSTPQLVKTL---------------IDV 264
Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
N + + CG +H +TD G + ++G G++GQ
Sbjct: 265 N---------IVSVVCGRQHICAITDQGEVYSWGLGVFGQ 295
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 94/245 (38%), Gaps = 46/245 (18%)
Query: 89 GKHGETPEPFPLPTE---ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS 145
GK + + P+ + VV + GWA +VT++G +YTWG+ E R F S
Sbjct: 194 GKIIDLNQTIPMQIQDIPEEVVDVSGGWAFSAAVTKSGRLYTWGFNEKGQLGLGNRWFHS 253
Query: 146 AGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF------ 199
P D V R+ + ++ E + G F
Sbjct: 254 T--------------PQLVKTLIDVNIVSVVCGRQHICAITDQGEVYSWGLGVFGQLGHG 299
Query: 200 ----TLSP----CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
L P V LN +I +VA G T++ S G ++ +G+G GQLG
Sbjct: 300 NVKSYLHPKKIQQFVELNE--RIAQVACGSNFTMVRSVQGLLYAFGHGEYGQLGSTE--- 354
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
T HL G+D V S + + +K +ACG H+ VVTD +
Sbjct: 355 --ETQHL------DFGGRDNHFKYSIPIVVKSLETKK--IKNVACGHLHTIVVTDENEVY 404
Query: 312 TFGWG 316
+GWG
Sbjct: 405 QWGWG 409
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 32/122 (26%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG------SRIKMVP 254
L P ++ G +I + +G H+L +S G V+ WG EGQLG+G ++ V
Sbjct: 23 LEPTVIEGLLGKRIIQTVSGEAHSLAVSRFGDVYSWGRSKEGQLGIGQGYGGSDKVMFVA 82
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
P LI L+H + ++ACG HS +TD G + +
Sbjct: 83 KPTLIKSLQHER------------------------IIKVACGNFHSLALTDMGKV--YE 116
Query: 315 WG 316
WG
Sbjct: 117 WG 118
>gi|449481449|ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 119/309 (38%), Gaps = 53/309 (17%)
Query: 53 KDVCG--GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
++VC G +LA +E GKL TWG + K P + +V+AA
Sbjct: 38 QNVCSVVAGSRNSLAITEDGKLFTWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAA 97
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS--FQKDSTG----KQSALPTEQ 164
G HC++V + G Y WG E +G G +KD+TG + A+P
Sbjct: 98 IGGWHCLAVDDQGRAYAWGGNE----------YGQCGEEPEKKDNTGRPPRRDIAIPQRC 147
Query: 165 APPSDKR----AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
AP R G V + + GD P V V++ +A G
Sbjct: 148 APKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDITQISVPVRVQGLDMVRL--IAVG 205
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGS---RIKMVPTPHL--IPCLEHAASGKDRPLLV 275
H L L + G +W WG GQLG G R + +P L + ++ AA G L
Sbjct: 206 AFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALT 265
Query: 276 RQGSVN--SSGKAGR----------------------SYVKEIACGGRHSAVVTDAGALL 311
G V G+ GR + +I+CGG HS VT G +
Sbjct: 266 DNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMF 325
Query: 312 TFGWGLYGQ 320
+FG G +G+
Sbjct: 326 SFGRGDHGR 334
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
+ P PIP + G + D+ GG + A +++G++ WG + + + K +
Sbjct: 233 DTQPRSQPIPVQGLSGLTLVDIAAGGW-HSTALTDNGEVYGWGRGEHGRLGFGDNDKSSK 291
Query: 94 -TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
P+ L + +V+ + G H V+VT G ++++G D G G +K
Sbjct: 292 MVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFG----------RGDHGRLGYGRKV 341
Query: 153 STGKQSALPTEQAPPSDK 170
+TG+ +P + PP +
Sbjct: 342 TTGQPEEVPIDIPPPRGR 359
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 109/296 (36%), Gaps = 72/296 (24%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEP----FPLPTEAS----VVKAAAGWAH 115
LA + G+ WG ++ GQ K T P +P + V + AAG H
Sbjct: 104 LAVDDQGRAYAWG-GNEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTH 162
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTR-------------DFGSAGSF-----QKDST--- 154
V +T G V+TWG + P +T+ + G+F Q+D T
Sbjct: 163 SVVLTREGHVWTWG--QPWPPGDITQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWA 220
Query: 155 ---------GKQSALPTEQAPPSDKRAGEEVVKRR----KTSSAREESENPASG------ 195
G P Q P +G +V +++ + E G
Sbjct: 221 WGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGR 280
Query: 196 ------DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
D+ + P V L G +I +++ GG H++ ++ G+++ +G G G+LG G +
Sbjct: 281 LGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRK 340
Query: 250 IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+ P +P G+ + G K +ACGGRH+ +
Sbjct: 341 V-TTGQPEEVPIDIPPPRGRT--------------ENGHWIAKLVACGGRHTLALV 381
>gi|332025816|gb|EGI65973.1| X-linked retinitis pigmentosa GTPase regulator [Acromyrmex
echinatior]
Length = 771
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 105/282 (37%), Gaps = 82/282 (29%)
Query: 40 SPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
SPI CG + + G ++A + G ++ WGS + EGQ L G +P
Sbjct: 179 SPILIYDCGLAGPRIIQLAAGSHHSMALTSDGGVVAWGS-NLEGQLGLPEIS-GLVYKPM 236
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS 158
+P V + +AG+ H V +TE+G +Y G E + G +F KQ
Sbjct: 237 KVPIPEPVKEISAGYYHSVFLTESGLIYICGESE-------SGKLGLNINFSTQVAPKQM 289
Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVA 218
LP +P L VA
Sbjct: 290 QLP----------------------------------------APAL----------HVA 299
Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
GG HT IL++ G ++ G GQLG+G + PTP L+P
Sbjct: 300 CGGHHTFILAENGNIYCSGSNASGQLGMGINVNETPTPKLLP------------------ 341
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + +I CG HSA++T++G L T G G +G+
Sbjct: 342 ----RGALQDEKIIKIVCGESHSAILTESGKLFTCGDGRHGK 379
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 60/149 (40%), Gaps = 31/149 (20%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI----PCLEHAA 266
G +I ++AAG H++ L+ G V WG EGQLGL +V P + P E +A
Sbjct: 190 GPRIIQLAAGSHHSMALTSDGGVVAWGSNLEGQLGLPEISGLVYKPMKVPIPEPVKEISA 249
Query: 267 SGKDRPLLVRQGSV-----NSSGKAGRSY----------------VKEIACGGRHSAVVT 305
L G + + SGK G + +ACGG H+ ++
Sbjct: 250 GYYHSVFLTESGLIYICGESESGKLGLNINFSTQVAPKQMQLPAPALHVACGGHHTFILA 309
Query: 306 DAGALLTFGWGLYGQRMAKCLAGDGINMG 334
+ G + G GQ G GIN+
Sbjct: 310 ENGNIYCSGSNASGQ------LGMGINVN 332
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 21/117 (17%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
C+ L P ++T VA G HTLI + +++ G EGQLG + +
Sbjct: 127 CVKILKPE-RVTHVACGRAHTLICTGAQKIFACGSNQEGQLGRENSV------------- 172
Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P+L+ G AG + ++A G HS +T G ++ +G L GQ
Sbjct: 173 -IGDSSSSPILIY-----DCGLAGPRII-QLAAGSHHSMALTSDGGVVAWGSNLEGQ 222
>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 448
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 106/273 (38%), Gaps = 50/273 (18%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP-----FPLPTEASVVKAAAGW 113
G ++A S + +WG +D GQ L G + P P F +P ASVV A
Sbjct: 28 GANHSVALLSSKAVCSWGRGED-GQ--LGHGDAEDRPVPTLLSGFDVPGIASVVICGADH 84
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPP 167
S E ++Y+WGW DFG G F + +Q
Sbjct: 85 TTAYS-DEQMQLYSWGWG----------DFGRLGHGNSSDVFHPQPIEALQGIKIKQIAC 133
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
D + S R ++ G+ +L P + GV + +AAG HT +
Sbjct: 134 GDSHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHAFEGVCVKMIAAGAEHTAAI 193
Query: 228 SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAG 287
+ G ++GWG+G G LGLG R L+P + G+ L
Sbjct: 194 LEDGDLYGWGWGQYGNLGLGDR-----NDRLVPEKVSSVEGEKMVL-------------- 234
Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ACG RH+ V+ +G L T+GW YGQ
Sbjct: 235 ------VACGWRHTVTVSSSGDLYTYGWSKYGQ 261
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 121/299 (40%), Gaps = 65/299 (21%)
Query: 41 PIPARLCGGD----SWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE 96
P+P L G D + +CG A + E +L +WG D HG + +
Sbjct: 61 PVPTLLSGFDVPGIASVVICGADHTTAY-SDEQMQLYSWGWGD------FGRLGHGNSSD 113
Query: 97 PF-PLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
F P P EA + + A G +HC++VT+AG+V++WG + G + +
Sbjct: 114 VFHPQPIEALQGIKIKQIACGDSHCLAVTDAGQVHSWGRNQ-------NGQLGLGNT--E 164
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTL 201
DS Q E AG E T++ E+ + N GD L
Sbjct: 165 DSLLPQKIHAFEGVCVKMIAAGAE-----HTAAILEDGDLYGWGWGQYGNLGLGDRNDRL 219
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
P V+ G K+ VA G RHT+ +S G ++ +G+ GQLG G + PH +
Sbjct: 220 VPEKVSSVEGEKMVLVACGWRHTVTVSSSGDLYTYGWSKYGQLGHGDFEDHL-VPHKLEA 278
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
L KDR ++ +IA G RH+ V G L +GW +GQ
Sbjct: 279 L------KDR------------------FISQIAGGWRHTMAVAGDGKLYGWGWNKFGQ 313
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 78/208 (37%), Gaps = 26/208 (12%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A E G L WG G L PE +V A GW H V+V+ +G+
Sbjct: 192 AILEDGDLYGWGWGQ-YGNLGLGDRNDRLVPEKVSSVEGEKMVLVACGWRHTVTVSSSGD 250
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + +P + D+ + R T +
Sbjct: 251 LYTYGWSK----------YGQLGH----GDFEDHLVPHKLEALKDRFISQIAGGWRHTMA 296
Query: 185 AREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+ + D SP V K+ +VA G RHTL L++ V+
Sbjct: 297 VAGDGKLYGWGWNKFGQVGVADNVDHCSPVQVIFPDEQKVAQVACGWRHTLALTENKNVF 356
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
WG G GQLG G I TP +I L
Sbjct: 357 SWGRGTSGQLGHGEIIDR-NTPKMIDAL 383
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 50 DSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
D + GG +A + GKL WG + GQ + +P P E V +
Sbjct: 281 DRFISQIAGGWRHTMAVAGDGKLYGWG-WNKFGQVGVADNVDHCSPVQVIFPDEQKVAQV 339
Query: 110 AAGWAHCVSVTEAGEVYTWG 129
A GW H +++TE V++WG
Sbjct: 340 ACGWRHTLALTENKNVFSWG 359
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 56/140 (40%), Gaps = 29/140 (20%)
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPT----------PHL 258
P + V+AG H++ L V WG G +GQLG G + + VPT +
Sbjct: 18 PEQTVALVSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIASV 77
Query: 259 IPC-LEHAASGKDRPLLVRQGSVNSSGKAGRSY-----------------VKEIACGGRH 300
+ C +H + D + + G+ G +K+IACG H
Sbjct: 78 VICGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGIKIKQIACGDSH 137
Query: 301 SAVVTDAGALLTFGWGLYGQ 320
VTDAG + ++G GQ
Sbjct: 138 CLAVTDAGQVHSWGRNQNGQ 157
>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60467743|gb|EAL65761.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 2083
Score = 71.6 bits (174), Expect = 5e-10, Method: Composition-based stats.
Identities = 64/236 (27%), Positives = 105/236 (44%), Gaps = 39/236 (16%)
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST 154
P P PL E +K + GW H ++E+GE++TWG + S ++ G Q +T
Sbjct: 1210 PMP-PLKNEKRAIKVSCGWDHVALISESGELFTWGKNQ---SGQLGHGL-DIGKIQ--TT 1262
Query: 155 GKQSALPTEQAPPSDKRAGEE---VVKRRKTSSAREESENPASGDEFFTLS---PCLVTL 208
K+ ++P G E V + + + G ++S P ++
Sbjct: 1263 PKRLEFFRGKSPIIMVECGGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQNRPKIIED 1322
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTP---HLIPCLEH 264
G KI +AAG HT++L G+++ +GYG +GQLG GS + K +PT + I ++H
Sbjct: 1323 ISGQKIQAIAAGFAHTIVLKKSGELYSFGYGDQGQLGHGSFVSKSIPTRIELNTIVGIQH 1382
Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + +IACG HS + +D G + ++G G GQ
Sbjct: 1383 ----------------------GGGKITQIACGFGHSVICSDNGEVYSWGLGKQGQ 1416
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 76/307 (24%), Positives = 119/307 (38%), Gaps = 60/307 (19%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQ--SYLTSGK 90
P+ ++ P+P + K CG SESG+L TWG + GQ L GK
Sbjct: 1202 PDPELMICPMPPLKNEKRAIKVSCG--WDHVALISESGELFTWGK-NQSGQLGHGLDIGK 1258
Query: 91 HGETPEPFPL-PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
TP+ ++ ++ G H + V VY+WG + FG G
Sbjct: 1259 IQTTPKRLEFFRGKSPIIMVECGGEHSICVDSDYVVYSWGQDK----------FGQLGHG 1308
Query: 150 QKDSTGKQSALPTE------QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS- 202
K + + + + QA + + K + S + F + S
Sbjct: 1309 TKSVSQNRPKIIEDISGQKIQAIAAGFAHTIVLKKSGELYSFGYGDQGQLGHGSFVSKSI 1368
Query: 203 PCLVTLNP-------GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
P + LN G KIT++A G H++I SD G+V+ WG G +GQLG G+ + +
Sbjct: 1369 PTRIELNTIVGIQHGGGKITQIACGFGHSVICSDNGEVYSWGLGKQGQLGHGN-YESIAR 1427
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
P LI L+ V +I+CG ++ TD + + W
Sbjct: 1428 PRLIEALKG--------------------------VTKISCGHFYTMATTDLKNV--YSW 1459
Query: 316 GLYGQRM 322
GL G+ M
Sbjct: 1460 GL-GEHM 1465
Score = 47.4 bits (111), Expect = 0.010, Method: Composition-based stats.
Identities = 71/300 (23%), Positives = 116/300 (38%), Gaps = 62/300 (20%)
Query: 57 GGG------CGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK 108
GGG CGF ++ S++G++ +WG Q L G + P + V K
Sbjct: 1383 GGGKITQIACGFGHSVICSDNGEVYSWGLGK---QGQLGHGNYESIARPRLIEALKGVTK 1439
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
+ G + ++ T+ VY+WG E + + K A P
Sbjct: 1440 ISCGHFYTMATTDLKNVYSWGLGEHMKLGH--------------GSDKNEATPRVVDFFI 1485
Query: 169 DKRAGEEVVKRRKT---SSAREESENPASGDE----FFTLSPCLVTLNPGVKITKVAAGG 221
K + V T + + + N S D+ F L+P + +T G
Sbjct: 1486 QKNVSKIVCGLNHTITLTYPGDLNNNSLSNDDDVNDFIDLAPSTSNSSSSSSLTNDNNNG 1545
Query: 222 RH-TLILSDMGQV---WGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
R L L++ QV + G G G+LGLG +K +P D+P+
Sbjct: 1546 RSGRLGLNENSQVSPIYACGAGEHGKLGLGGDLK---SPFF-----------DKPIPTAI 1591
Query: 278 GSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQRMAKCLAGDGINMGSWV 337
VN+ + +I+CG +A++T GAL +G+G +GQ G+G +WV
Sbjct: 1592 KGVNALN------LIDISCGTDFTAMITSNGALYVWGYGNFGQ------IGNGKTDDAWV 1639
>gi|449447492|ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 119/309 (38%), Gaps = 53/309 (17%)
Query: 53 KDVCG--GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
++VC G +LA +E GKL TWG + K P + +V+AA
Sbjct: 38 QNVCSVVAGSRNSLAITEDGKLFTWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAA 97
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS--FQKDSTG----KQSALPTEQ 164
G HC++V + G Y WG E +G G +KD+TG + A+P
Sbjct: 98 IGGWHCLAVDDQGRAYAWGGNE----------YGQCGEEPEKKDNTGRPPRRDIAIPQRC 147
Query: 165 APPSDKR----AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
AP R G V + + GD P V V++ +A G
Sbjct: 148 APKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDITQISVPVRVQGLDMVRL--IAVG 205
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGS---RIKMVPTPHL--IPCLEHAASGKDRPLLV 275
H L L + G +W WG GQLG G R + +P L + ++ AA G L
Sbjct: 206 AFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALT 265
Query: 276 RQGSVN--SSGKAGR----------------------SYVKEIACGGRHSAVVTDAGALL 311
G V G+ GR + +I+CGG HS VT G +
Sbjct: 266 DNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMF 325
Query: 312 TFGWGLYGQ 320
+FG G +G+
Sbjct: 326 SFGRGDHGR 334
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
+ P PIP + G + D+ GG + A +++G++ WG + + + K +
Sbjct: 233 DTQPRSQPIPVQGLSGLTLVDIAAGGW-HSTALTDNGEVYGWGRGEHGRLGFGDNDKSSK 291
Query: 94 -TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
P+ L + +V+ + G H V+VT G ++++G D G G +K
Sbjct: 292 MVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFG----------RGDHGRLGYGRKV 341
Query: 153 STGKQSALPTEQAPPSDK 170
+TG+ +P + PP +
Sbjct: 342 TTGQPEEVPIDIPPPRGR 359
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 109/296 (36%), Gaps = 72/296 (24%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEP----FPLPTEAS----VVKAAAGWAH 115
LA + G+ WG ++ GQ K T P +P + V + AAG H
Sbjct: 104 LAVDDQGRAYAWG-GNEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTH 162
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTR-------------DFGSAGSF-----QKDST--- 154
V +T G V+TWG + P +T+ + G+F Q+D T
Sbjct: 163 SVVLTREGHVWTWG--QPWPPGDITQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWA 220
Query: 155 ---------GKQSALPTEQAPPSDKRAGEEVVKRR----KTSSAREESENPASG------ 195
G P Q P +G +V +++ + E G
Sbjct: 221 WGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGR 280
Query: 196 ------DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
D+ + P V L G +I +++ GG H++ ++ G+++ +G G G+LG G +
Sbjct: 281 LGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRK 340
Query: 250 IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+ P +P G+ + G K +ACGGRH+ +
Sbjct: 341 V-TTGQPEEVPIDIPPPRGRT--------------ENGHWIAKLVACGGRHTLALV 381
>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
Length = 448
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 109/276 (39%), Gaps = 53/276 (19%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--------ASVVKAA 110
G ++A G + +WG +D GQ L G + P P L ASVV
Sbjct: 28 GASHSVALLSGGVVCSWGRGED-GQ--LGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 84
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQ 164
A S E ++Y+WGW DFG G F + Q
Sbjct: 85 ADHTTAYSDEEL-QLYSWGWG----------DFGRLGHGNSSDVFNPQPIQALQGVRITQ 133
Query: 165 APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
D V S R ++ G+ +L P + GV++ +AAG HT
Sbjct: 134 IACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHT 193
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
+++ G ++GWG+G G LGLG R DR + + SVN
Sbjct: 194 AAVTEDGDLYGWGWGRYGNLGLGDR-------------------DDRLIPEKVSSVN--- 231
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G+ V +ACG RH+ V+ +G++ T+GW YGQ
Sbjct: 232 --GQKMVL-VACGWRHTITVSSSGSIYTYGWSKYGQ 264
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 135/353 (38%), Gaps = 88/353 (24%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF-PLPTEA----SVVKA 109
+CG A + E +L +WG D HG + + F P P +A + +
Sbjct: 82 ICGADHTTAYSDEEL-QLYSWGWGD------FGRLGHGNSSDVFNPQPIQALQGVRITQI 134
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G +HC++VT AG V++WG + G +T + S LP +
Sbjct: 135 ACGDSHCLAVTVAGHVHSWGRNQ-------------NGQLGLGNT-EDSLLPQKIQAFEG 180
Query: 170 KRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAA 219
R T++ E+ + N GD L P V+ G K+ VA
Sbjct: 181 VRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVAC 240
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA----SG--KDRPL 273
G RHT+ +S G ++ +G+ GQLG G + PH + L+ SG +
Sbjct: 241 GWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHL-VPHKLEALKDTTISQISGGWRHTMA 299
Query: 274 LVRQGSV-----NSSGKAG-----------------RSYVKEIACGGRHSAVVTDAGALL 311
L G + N G+ G V ++ACG RH+ +T+A +
Sbjct: 300 LAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVF 359
Query: 312 TFGWGLYGQ------------RMAKCLAGDG-----------INMGSWVWVTP 341
++G G GQ +M L+ DG + M + VWV+P
Sbjct: 360 SWGRGTSGQLGHGEIVDRNIPKMIDALSSDGSACKQLESSKAVPMSAKVWVSP 412
>gi|301112376|ref|XP_002905267.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262095597|gb|EEY53649.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 233
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 61/136 (44%), Gaps = 28/136 (20%)
Query: 187 EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
S A+ + +P +V V+I VAAGG H+L + G+VW WG GQLG+
Sbjct: 66 NSSGQVAAASKEMVQTPTIVEFPKAVEIVAVAAGGMHSLAVDSCGRVWAWGCNTYGQLGI 125
Query: 247 GSRIKMVPTPHLI--PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
G + + TP L+ P HA + IA G HSAV+
Sbjct: 126 GCEMDKLHTPSLVALPADVHA--------------------------QRIAAGWAHSAVI 159
Query: 305 TDAGALLTFGWGLYGQ 320
+G + TFGWGLY Q
Sbjct: 160 LTSGEIFTFGWGLYNQ 175
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 79/205 (38%), Gaps = 40/205 (19%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G AL ++SG+++ WG + GQ S + +TP P +V AAG H ++
Sbjct: 47 GSNHALVLTDSGRVVAWG-WNSSGQVAAASKEMVQTPTIVEFPKAVEIVAVAAGGMHSLA 105
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
V G V+ WG G K T ALP + V
Sbjct: 106 VDSCGRVWAWG-------CNTYGQLGIGCEMDKLHTPSLVALPAD-------------VH 145
Query: 179 RRKTSSAREESENPASGDEFFT-----------------LSPCLVTLNPGV--KITKVAA 219
++ ++ S + E FT L P +V G+ I +VA
Sbjct: 146 AQRIAAGWAHSAVILTSGEIFTFGWGLYNQLGHSTTQSELQPVIVDALQGLDSNIVQVAC 205
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQL 244
G HT L++ G ++ WG+G +GQL
Sbjct: 206 GNWHTAALTESGDLYTWGWGKDGQL 230
>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
Length = 975
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 132/332 (39%), Gaps = 79/332 (23%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
WGY P S L I A ++CG S + V CG ++ E G++ T G +
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 62
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
+GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 63 KGQ--LGHVREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA---------- 110
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
GS G +T A+P ++ ++ + + S AS +FFT
Sbjct: 111 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALASDGQFFT 160
Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
SP V G+ + +VAAGG H+ LS G V+GWG G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
QLGL KDR P V+ V I+CG H
Sbjct: 221 QLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGEEH 253
Query: 301 SAVVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
+AV+T +G + TFG G YGQ L D +N
Sbjct: 254 TAVLTKSGGVFTFGAGSYGQ-----LGHDSMN 280
>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
Group]
gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 109/276 (39%), Gaps = 53/276 (19%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--------ASVVKAA 110
G ++A G + +WG +D GQ L G + P P L ASVV
Sbjct: 33 GASHSVALLSGGVVCSWGRGED-GQ--LGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 89
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQ 164
A S E ++Y+WGW DFG G F + Q
Sbjct: 90 ADHTTAYSDEEL-QLYSWGWG----------DFGRLGHGNSSDVFNPQPIQALQGVRITQ 138
Query: 165 APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
D V S R ++ G+ +L P + GV++ +AAG HT
Sbjct: 139 IACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHT 198
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
+++ G ++GWG+G G LGLG R DR + + SVN
Sbjct: 199 AAVTEDGDLYGWGWGRYGNLGLGDR-------------------DDRLIPEKVSSVN--- 236
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G+ V +ACG RH+ V+ +G++ T+GW YGQ
Sbjct: 237 --GQKMVL-VACGWRHTITVSSSGSIYTYGWSKYGQ 269
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 135/353 (38%), Gaps = 88/353 (24%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF-PLPTEA----SVVKA 109
+CG A + E +L +WG D HG + + F P P +A + +
Sbjct: 87 ICGADHTTAYSDEEL-QLYSWGWGD------FGRLGHGNSSDVFNPQPIQALQGVRITQI 139
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G +HC++VT AG V++WG + G +T + S LP +
Sbjct: 140 ACGDSHCLAVTVAGHVHSWGRNQ-------------NGQLGLGNT-EDSLLPQKIQAFEG 185
Query: 170 KRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAA 219
R T++ E+ + N GD L P V+ G K+ VA
Sbjct: 186 VRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVAC 245
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA----SG--KDRPL 273
G RHT+ +S G ++ +G+ GQLG G + PH + L+ SG +
Sbjct: 246 GWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHL-VPHKLEALKDTTISQISGGWRHTMA 304
Query: 274 LVRQGSV-----NSSGKAG-----------------RSYVKEIACGGRHSAVVTDAGALL 311
L G + N G+ G V ++ACG RH+ +T+A +
Sbjct: 305 LAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVF 364
Query: 312 TFGWGLYGQ------------RMAKCLAGDG-----------INMGSWVWVTP 341
++G G GQ +M L+ DG + M + VWV+P
Sbjct: 365 SWGRGTSGQLGHGEIVDRNIPKMIDALSSDGSACKQLESSKAVPMSAKVWVSP 417
>gi|329664574|ref|NP_001192921.1| RCC1 domain-containing protein 1 [Bos taurus]
Length = 377
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 39/197 (19%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL +G++ +WG+ G+HG+ EP P EA + +
Sbjct: 167 GAEHALLLDAAGQVFSWGA-----------GRHGQLGHGTLEAEPEPRLLEALQGLRMAE 215
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V ++E G++Y WGW E A T+ G K + G+ S L +
Sbjct: 216 VAAGGWHSVCLSETGDIYIWGWNESGQLALPTKSLAEDG---KTTAGEASGLEED----- 267
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
G EV ++ S+ + + P + F P L+ L+PG + KV+ G RHT +L+
Sbjct: 268 ----GSEV---KRGSAGEDGAPAPFIAVQPF---PALLDLSPGSEAVKVSCGSRHTAVLT 317
Query: 229 DMGQVWGWGYGGEGQLG 245
G+++ WG+G GQLG
Sbjct: 318 RTGELYTWGWGKYGQLG 334
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 64/140 (45%), Gaps = 31/140 (22%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L+ G+++ +VAAGG H++ LS+ G ++ WG+ GQL L PT L
Sbjct: 202 PRLLEALQGLRMAEVAAGGWHSVCLSETGDIYIWGWNESGQLAL-------PTKSLAE-- 252
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGR----------------------SYVKEIACGGRH 300
+ + + L GS G AG S +++CG RH
Sbjct: 253 DGKTTAGEASGLEEDGSEVKRGSAGEDGAPAPFIAVQPFPALLDLSPGSEAVKVSCGSRH 312
Query: 301 SAVVTDAGALLTFGWGLYGQ 320
+AV+T G L T+GWG YGQ
Sbjct: 313 TAVLTRTGELYTWGWGKYGQ 332
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 103/269 (38%), Gaps = 67/269 (24%)
Query: 89 GKHGETPEPFPLPT-EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
G+ +PEP P V + +A W++ VT G+V +++ G
Sbjct: 26 GRQVHSPEPLRTPGGSLGVCRVSASWSYTAFVTRGGQV------------QLSGAAGGTA 73
Query: 148 SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR---------EESENPASGDE- 197
D+ + L +A P AG E+ S+ R +E+E+ S DE
Sbjct: 74 DGCTDAWASEELLVLLRAGPG---AGAELQAWAPGSAMRGDPLWSQAVQEAEHGPSRDET 130
Query: 198 ---FFTLSPCLVT-----------LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
L PC L P ++ ++ G H L+L GQV+ WG G GQ
Sbjct: 131 QAGLLPLLPCARAYVSPRPPFYRPLAPTLRARRLELGAEHALLLDAAGQVFSWGAGRHGQ 190
Query: 244 LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
LG G+ ++ P P L+ L+ + E+A GG HS
Sbjct: 191 LGHGT-LEAEPEPRLLEALQGL------------------------RMAEVAAGGWHSVC 225
Query: 304 VTDAGALLTFGWGLYGQRM--AKCLAGDG 330
+++ G + +GW GQ K LA DG
Sbjct: 226 LSETGDIYIWGWNESGQLALPTKSLAEDG 254
>gi|296475513|tpg|DAA17628.1| TPA: CG6678-like [Bos taurus]
Length = 377
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 39/197 (19%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL +G++ +WG+ G+HG+ EP P EA + +
Sbjct: 167 GAEHALLLDAAGQVFSWGA-----------GRHGQLGHGTLEAEPEPRLLEALQGLRMAE 215
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V ++E G++Y WGW E A T+ G K + G+ S L +
Sbjct: 216 VAAGGWHSVCLSETGDIYIWGWNESGQLALPTKSLAEDG---KTTAGEASGLEED----- 267
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
G EV ++ S+ + + P + F P L+ L+PG + KV+ G RHT +L+
Sbjct: 268 ----GSEV---KRGSAGEDGAPAPFIAVQPF---PALLDLSPGSEAVKVSCGSRHTAVLT 317
Query: 229 DMGQVWGWGYGGEGQLG 245
G+++ WG+G GQLG
Sbjct: 318 RTGELYTWGWGKYGQLG 334
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 64/140 (45%), Gaps = 31/140 (22%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L+ G+++ +VAAGG H++ LS+ G ++ WG+ GQL L PT L
Sbjct: 202 PRLLEALQGLRMAEVAAGGWHSVCLSETGDIYIWGWNESGQLAL-------PTKSLAE-- 252
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGR----------------------SYVKEIACGGRH 300
+ + + L GS G AG S +++CG RH
Sbjct: 253 DGKTTAGEASGLEEDGSEVKRGSAGEDGAPAPFIAVQPFPALLDLSPGSEAVKVSCGSRH 312
Query: 301 SAVVTDAGALLTFGWGLYGQ 320
+AV+T G L T+GWG YGQ
Sbjct: 313 TAVLTRTGELYTWGWGKYGQ 332
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 102/269 (37%), Gaps = 67/269 (24%)
Query: 89 GKHGETPEPFPLPT-EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
G+ +PEP P V + +A W++ VT G V +++ G
Sbjct: 26 GRQVHSPEPLRTPGGSLGVCRVSASWSYTAFVTRGGRV------------QLSGAAGGTA 73
Query: 148 SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR---------EESENPASGDE- 197
D+ + L +A P AG E+ S+ R +E+E+ S DE
Sbjct: 74 DGCTDAWASEELLVLLRAGPG---AGAELQAWAPGSAMRGDPLWSQAVQEAEHGPSRDET 130
Query: 198 ---FFTLSPCLVT-----------LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
L PC L P ++ ++ G H L+L GQV+ WG G GQ
Sbjct: 131 QAGLLPLLPCARAYVSPRPPFYRPLAPTLRARRLELGAEHALLLDAAGQVFSWGAGRHGQ 190
Query: 244 LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
LG G+ ++ P P L+ L+ + E+A GG HS
Sbjct: 191 LGHGT-LEAEPEPRLLEALQGL------------------------RMAEVAAGGWHSVC 225
Query: 304 VTDAGALLTFGWGLYGQRM--AKCLAGDG 330
+++ G + +GW GQ K LA DG
Sbjct: 226 LSETGDIYIWGWNESGQLALPTKSLAEDG 254
>gi|221113828|ref|XP_002154529.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
[Hydra magnipapillata]
Length = 364
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 118/314 (37%), Gaps = 89/314 (28%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + VY G+ G S + I +LC D + G G LA
Sbjct: 32 NEALLTLTNGDVYALGFNGNGCLGVGDGSSTLEPKIIEQLCQKDIVQLAYGMG-PHVLAV 90
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVY 126
++SG+L +WG GQ TS E +P + + V++ A G H +++TE GEVY
Sbjct: 91 TDSGELYSWGHGG-YGQLGHTSE---EKSKPVLVYMQKKVIQVACGSYHSIALTEDGEVY 146
Query: 127 TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR 186
WG C G G + QA P KR
Sbjct: 147 AWGSNNC----------GQLG----------LGISNNQATP--KR--------------- 169
Query: 187 EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
V+L P KI V+ G T++L+ G+++ WGY G GQLG+
Sbjct: 170 -------------------VSLIPSKKIVSVSCGQSFTVMLTTDGELYSWGYNGNGQLGI 210
Query: 247 GSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+ T L P V +G ++++I CG H V+TD
Sbjct: 211 ENN-----TNQLQP-------------------VRVTGSLFGKFIEKIVCGMAHVLVLTD 246
Query: 307 AGALLTFGWGLYGQ 320
G L ++G YGQ
Sbjct: 247 IGELYSWGANSYGQ 260
>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
Length = 440
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 110/275 (40%), Gaps = 55/275 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA------AAG 112
G +A + +WG +D GQ HG+T + LPT S + A A G
Sbjct: 21 GASHTVALLSGNVVCSWGRGED-GQL-----GHGDTDDRL-LPTHLSALDAQQIDSIACG 73
Query: 113 WAHCVSVTEA-GEVYTWGWRECVPSAKVTRDFGSAGSFQKDS------TGKQSALPTEQA 165
H ++ +E+ E+Y+WGW DFG G L +Q
Sbjct: 74 ADHTLAYSESRNELYSWGWG----------DFGRLGHGNSSDLLIPQPIIALQGLRIKQI 123
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
D ++ S R ++ G +L P + GV I VAAG H++
Sbjct: 124 ACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSV 183
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
+++ G+++GWG+G G LGLG R DR + + SV+
Sbjct: 184 AITENGELYGWGWGRYGNLGLGDR-------------------NDRWIPEKVSSVDC--- 221
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +ACG RH+ V+ G L T+GW YGQ
Sbjct: 222 ---DKMVMVACGWRHTISVSSLGGLYTYGWSKYGQ 253
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 104/274 (37%), Gaps = 37/274 (13%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P+K +P ++ G ++A +E+G+L WG G L
Sbjct: 161 PQKIQTFQGVPIKMVAA---------GAEHSVAITENGELYGWGWGR-YGNLGLGDRNDR 210
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
PE +V A GW H +SV+ G +YT+GW + +G G
Sbjct: 211 WIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSK----------YGQLGH---- 256
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR----------EESENPASGDEFFTLS 202
+ S +P + SDK + R + + + GD S
Sbjct: 257 GNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCS 316
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P V K+ +++ G RHT+ +++ V+ WG G GQLG G + +P +I L
Sbjct: 317 PVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDR-NSPKIIEAL 375
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
+ G P + + SGK+G S + A
Sbjct: 376 --SVDGSSGPHIESSNTDLLSGKSGASLFERYAV 407
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 112/293 (38%), Gaps = 56/293 (19%)
Query: 42 IPARLCGGDSWK-DVCGGGCGFALATSES-GKLITWGSADDEGQSYLTSGKHGE--TPEP 97
+P L D+ + D G LA SES +L +WG D L G + P+P
Sbjct: 55 LPTHLSALDAQQIDSIACGADHTLAYSESRNELYSWGWGD---FGRLGHGNSSDLLIPQP 111
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ + A G +HC++VT GEV +WG + G S +DS Q
Sbjct: 112 IIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQ-------NGQLGLGTS--EDSLVPQ 162
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVT 207
+ P AG E + + E E N GD P V+
Sbjct: 163 KIQTFQGVPIKMVAAGAE-----HSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVS 217
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
K+ VA G RHT+ +S +G ++ +G+ GQLG G+ L+P A S
Sbjct: 218 SVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNF-----EDSLVPQKLQALS 272
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
K + +++ G RHS +T G L +GW +GQ
Sbjct: 273 DK--------------------LISQVSGGWRHSMALTSTGLLYGWGWNKFGQ 305
>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
Length = 463
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 109/276 (39%), Gaps = 53/276 (19%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--------ASVVKAA 110
G ++A G + +WG +D GQ L G + P P L ASVV
Sbjct: 28 GASHSVALLSGGVVCSWGRGED-GQ--LGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 84
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQ 164
A S E ++Y+WGW DFG G F + Q
Sbjct: 85 ADHTTAYSDEEL-QLYSWGWG----------DFGRLGHGNSSDVFNPQPIQALQGVRITQ 133
Query: 165 APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
D V S R ++ G+ +L P + GV++ +AAG HT
Sbjct: 134 IACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHT 193
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
+++ G ++GWG+G G LGLG R DR + + SVN
Sbjct: 194 AAVTEDGDLYGWGWGRYGNLGLGDR-------------------DDRLIPEKVSSVN--- 231
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G+ V +ACG RH+ V+ +G++ T+GW YGQ
Sbjct: 232 --GQKMVL-VACGWRHTITVSSSGSIYTYGWSKYGQ 264
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 135/368 (36%), Gaps = 103/368 (27%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF-PLPTEA----SVVKA 109
+CG A + E +L +WG D HG + + F P P +A + +
Sbjct: 82 ICGADHTTAYSDEEL-QLYSWGWGD------FGRLGHGNSSDVFNPQPIQALQGVRITQI 134
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G +HC++VT AG V++WG + G +T + S LP +
Sbjct: 135 ACGDSHCLAVTVAGHVHSWGRNQ-------------NGQLGLGNT-EDSLLPQKIQAFEG 180
Query: 170 KRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAA 219
R T++ E+ + N GD L P V+ G K+ VA
Sbjct: 181 VRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVAC 240
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL------ 273
G RHT+ +S G ++ +G+ GQLG G + PH + L+ ++ +
Sbjct: 241 GWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHL-VPHKLEALKDTTISQEEAVELIFFF 299
Query: 274 ---------------LVRQGSV-----NSSGKAG-----------------RSYVKEIAC 296
L G + N G+ G V ++AC
Sbjct: 300 LGDEGFRVGGGIQWALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVAC 359
Query: 297 GGRHSAVVTDAGALLTFGWGLYGQ------------RMAKCLAGDG-----------INM 333
G RH+ +T+A + ++G G GQ +M L+ DG + M
Sbjct: 360 GWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSDGSACKQLESSKAVPM 419
Query: 334 GSWVWVTP 341
+ VWV+P
Sbjct: 420 SAKVWVSP 427
>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 440
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 110/275 (40%), Gaps = 55/275 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA------AAG 112
G +A + +WG +D GQ HG+T + LPT S + A A G
Sbjct: 21 GASHTVALLSGNVVCSWGRGED-GQL-----GHGDTDDRL-LPTHLSALDAQQIDSIACG 73
Query: 113 WAHCVSVTEA-GEVYTWGWRECVPSAKVTRDFGSAGSFQKDS------TGKQSALPTEQA 165
H ++ +E+ E+Y+WGW DFG G L +Q
Sbjct: 74 ADHTLAYSESRNELYSWGWG----------DFGRLGHGNSSDLLIPQPIIALQGLRIKQI 123
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
D ++ S R ++ G +L P + GV I VAAG H++
Sbjct: 124 ACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSV 183
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
+++ G+++GWG+G G LGLG R DR + + SV+
Sbjct: 184 AITENGELYGWGWGRYGNLGLGDR-------------------NDRWIPEKVSSVDC--- 221
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +ACG RH+ V+ G L T+GW YGQ
Sbjct: 222 ---DKMVMVACGWRHTISVSSLGGLYTYGWSKYGQ 253
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 104/274 (37%), Gaps = 37/274 (13%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P+K +P ++ G ++A +E+G+L WG G L
Sbjct: 161 PQKIQTFQGVPIKMVAA---------GAEHSVAITENGELYGWGWGR-YGNLGLGDRNDR 210
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
PE +V A GW H +SV+ G +YT+GW + +G G
Sbjct: 211 WIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSK----------YGQLGH---- 256
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR----------EESENPASGDEFFTLS 202
+ S +P + SDK + R + + + GD S
Sbjct: 257 GNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCS 316
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P V K+ +++ G RHT+ +++ V+ WG G GQLG G + +P +I L
Sbjct: 317 PVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDR-NSPKIIEAL 375
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
+ G P + + SGK+G S + A
Sbjct: 376 --SVDGSSGPHIESSNTDLLSGKSGASLSERYAV 407
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 112/293 (38%), Gaps = 56/293 (19%)
Query: 42 IPARLCGGDSWK-DVCGGGCGFALATSES-GKLITWGSADDEGQSYLTSGKHGE--TPEP 97
+P L D+ + D G LA SES +L +WG D L G + P+P
Sbjct: 55 LPTHLSALDAQQIDSIACGADHTLAYSESRNELYSWGWGD---FGRLGHGNSSDLLIPQP 111
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ + A G +HC++VT GEV +WG + G S +DS Q
Sbjct: 112 IIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQ-------NGQLGLGTS--EDSLVPQ 162
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVT 207
+ P AG E + + E E N GD P V+
Sbjct: 163 KIQTFQGVPIKMVAAGAE-----HSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVS 217
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
K+ VA G RHT+ +S +G ++ +G+ GQLG G+ L+P A S
Sbjct: 218 SVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNF-----EDSLVPQKLQALS 272
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
K + +++ G RHS +T G L +GW +GQ
Sbjct: 273 DK--------------------LISQVSGGWRHSMALTSTGLLYGWGWNKFGQ 305
>gi|156378180|ref|XP_001631022.1| predicted protein [Nematostella vectensis]
gi|156218054|gb|EDO38959.1| predicted protein [Nematostella vectensis]
Length = 133
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 26/112 (23%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI--KMVPTPHLIPCLEHAASG 268
G+ I +AAGG H+ ++SD G V+GWG+ GQ+G+G I +M PTP P
Sbjct: 34 GINIKCIAAGGWHSAVISDAGDVYGWGWNESGQVGIGDGIQCQMDPTPICFP-------A 86
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
D P +V +ACG RH+A V+D + T+GWG YGQ
Sbjct: 87 SDEPNVV-----------------SVACGARHTAAVSDDAQVWTWGWGWYGQ 121
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 53/141 (37%), Gaps = 54/141 (38%)
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AA GW H +++AG+VY WGW E S +V G Q D PT P+
Sbjct: 41 AAGGW-HSAVISDAGDVYGWGWNE---SGQV--GIGDGIQCQMD--------PTPICFPA 86
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
S+ P + VA G RHT +S
Sbjct: 87 --------------------SDEP--------------------NVVSVACGARHTAAVS 106
Query: 229 DMGQVWGWGYGGEGQLGLGSR 249
D QVW WG+G GQLG G R
Sbjct: 107 DDAQVWTWGWGWYGQLGHGDR 127
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 13/103 (12%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
T P + +L I + W + S++G + WG ++ GQ + G
Sbjct: 24 TEPRRLEVLVGINIKCIAAGGWH---------SAVISDAGDVYGWG-WNESGQVGIGDGI 73
Query: 91 HGE---TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ TP FP E +VV A G H +V++ +V+TWGW
Sbjct: 74 QCQMDPTPICFPASDEPNVVSVACGARHTAAVSDDAQVWTWGW 116
>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
mutus]
Length = 1019
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 114/296 (38%), Gaps = 96/296 (32%)
Query: 30 GTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
G PE+ P L + L CG + +LA G++ WG+A EGQ L
Sbjct: 63 GEQPERIPALETLHVALVSCGKEH-----------SLAVCHKGRVFAWGAAS-EGQ--LG 108
Query: 88 SGKHGET---PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
G+ ET P+ +++ A G H V+++E G+V++WG T G
Sbjct: 109 IGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWG----------TNSHG 158
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPC 204
G GK+ P+ QA P R+ E
Sbjct: 159 QLG------LGKE--FPS-QASPQRVRSLE------------------------------ 179
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
G+ + +VAAGG H+ LS G +GWG GQL L
Sbjct: 180 ------GIPLAQVAAGGHHSFALSLSGTSFGWGSNNAGQLAL------------------ 215
Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
SG + P V++ S G V I+CG +H+AV+T G + TFG YGQ
Sbjct: 216 --SGNNAP--VQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQ 267
>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
Length = 1060
Score = 70.9 bits (172), Expect = 9e-10, Method: Composition-based stats.
Identities = 73/270 (27%), Positives = 115/270 (42%), Gaps = 44/270 (16%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG L + G++++ G+ +D GQ L K + P E +V++A++G H
Sbjct: 50 ACGLQHTLFVKKDGRVLSCGN-NDYGQ--LGHEKPCKRPALIDSLGERNVLQASSGTKHS 106
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+T+AG+V+TWG E + D S S + G + A S G
Sbjct: 107 TVLTDAGQVFTWGSNEDNQLGRGQVDSAST-SIPRMVRGLADHKVVQVACGSAHTVGLTA 165
Query: 177 VKRRKTSSAREESE----NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
+ T + + N +E P V+ G+ I +VAAG H L+L+ G
Sbjct: 166 TGQIYTWGSNNHGQLGLANKTPQNE-----PQWVSCISGLPIVRVAAGADHNLVLTISGA 220
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSY 290
++ WG GQLG+G +DR P LV+ ++ + G
Sbjct: 221 LFAWGCNSFGQLGVG-------------------DDQDRGAPTLVK--TLRNQG------ 253
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +ACG HS +T G + TFG G+YGQ
Sbjct: 254 ICALACGDDHSLALTRDGGVFTFGAGMYGQ 283
>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
Length = 1015
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 73/146 (50%), Gaps = 29/146 (19%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL---- 258
P +V ++I +VA GG+H+L LS+ G+++ WG GQLG+GS K P P
Sbjct: 130 PRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIGS-TKNQPKPQELTSL 188
Query: 259 --IPCLEHAASGKDRPLLVRQGSV-----NSSGKAG------RSY-----------VKEI 294
IP + A G +L + G+V N+ G+ G R Y V I
Sbjct: 189 TGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGDTGDRKYPTHVKSLRSLKVTHI 248
Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQ 320
+CG H+AV+T G +LTFG G YGQ
Sbjct: 249 SCGEEHTAVLTLDGGVLTFGAGSYGQ 274
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 22/118 (18%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P ++T I +V+ G H L+++D QV+ WGY GQLG L
Sbjct: 75 PTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQLG--------------HTL 120
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
E + RP +V++ S + ++ACGG+HS +++ G + ++G +GQ
Sbjct: 121 EAGGNNSRRPRMVKELS--------SLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQ 170
>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1391
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 98/260 (37%), Gaps = 82/260 (31%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVT 120
LA S+ G+++ WG +D GQ L +G P P L AS VK G H +++T
Sbjct: 99 TLAVSDRGQVLGWGR-NDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALT 157
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
G +++WG D+T Q + T +D+
Sbjct: 158 RDGRLFSWG----------------------DNTYGQLGIGTLVTNYTDR---------- 185
Query: 181 KTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
P +T GV + +VA GG H+ L+ G V+GWG
Sbjct: 186 ----------------------PTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKND 223
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
GQLGLG++ K P L+R VK IACG H
Sbjct: 224 VGQLGLGNK-----------------ENKAYPTLLR--------NMRSQMVKHIACGQDH 258
Query: 301 SAVVTDAGALLTFGWGLYGQ 320
+A++T G + FG G GQ
Sbjct: 259 TAMLTADGGVFLFGQGSEGQ 278
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 97/260 (37%), Gaps = 82/260 (31%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVT 120
LA S+ +++ WG +D GQ L +G P P L AS VK G H +++T
Sbjct: 439 TLAVSDRVQVLGWGR-NDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSLHSMALT 497
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
G +++WG D+T Q + T +D+
Sbjct: 498 RDGRLFSWG----------------------DNTYGQLGIGTLVTNYTDR---------- 525
Query: 181 KTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
P +T GV + +VA GG H+ L+ G V+GWG
Sbjct: 526 ----------------------PTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKND 563
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
GQLGLG++ K P L+R VK IACG H
Sbjct: 564 VGQLGLGNK-----------------ENKSYPTLLR--------NMRSQMVKHIACGQDH 598
Query: 301 SAVVTDAGALLTFGWGLYGQ 320
+A++T G + FG G GQ
Sbjct: 599 TAMLTADGGVFLFGQGSEGQ 618
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 54/119 (45%), Gaps = 25/119 (21%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLIPC 261
P V+ V I VA G HTL +SD GQV GWG GQ GL + I+ P P +
Sbjct: 78 PVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQCGLATGDIENKPRPRI--- 134
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
L+H AS + +VK + CG HS +T G L ++G YGQ
Sbjct: 135 LKHLASYQ--------------------FVK-VCCGSLHSMALTRDGRLFSWGDNTYGQ 172
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 49/110 (44%), Gaps = 25/110 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKD 270
V I VA G HTL +SD QV GWG GQ GL + I+ P P + L H AS +
Sbjct: 427 VVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRI---LRHLASYQ- 482
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+VK + CG HS +T G L ++G YGQ
Sbjct: 483 -------------------FVK-VCCGSLHSMALTRDGRLFSWGDNTYGQ 512
>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
Length = 1016
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 114/296 (38%), Gaps = 96/296 (32%)
Query: 30 GTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
G PE+ P L + L CG + +LA G++ WG+A EGQ L
Sbjct: 63 GEQPERIPALETLNVALVSCGKEH-----------SLAVCHKGRVFAWGAAS-EGQ--LG 108
Query: 88 SGKHGET---PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
G+ ET P+ +++ A G H V+++E G+V++WG T G
Sbjct: 109 IGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWG----------TNSHG 158
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPC 204
G GK+ P+ QA P R+ E
Sbjct: 159 QLG------LGKE--FPS-QASPQRVRSLE------------------------------ 179
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
G+ + +VAAGG H+ LS G +GWG GQL L
Sbjct: 180 ------GIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLAL------------------ 215
Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
SG + P V++ S G V I+CG +H+AV+T G + TFG YGQ
Sbjct: 216 --SGNNAP--VQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQ 267
>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
Length = 1016
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 114/296 (38%), Gaps = 96/296 (32%)
Query: 30 GTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
G PE+ P L + L CG + +LA G++ WG+A EGQ L
Sbjct: 63 GEQPERIPALETLNVALVSCGKEH-----------SLAVCHKGRVFAWGAAS-EGQ--LG 108
Query: 88 SGKHGET---PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
G+ ET P+ +++ A G H V+++E G+V++WG T G
Sbjct: 109 IGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWG----------TNSHG 158
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPC 204
G GK+ P+ QA P R+ E
Sbjct: 159 QLG------LGKE--FPS-QASPQRVRSLE------------------------------ 179
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
G+ + +VAAGG H+ LS G +GWG GQL L
Sbjct: 180 ------GIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLAL------------------ 215
Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
SG + P V++ S G V I+CG +H+AV+T G + TFG YGQ
Sbjct: 216 --SGNNAP--VQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQ 267
>gi|159038147|ref|YP_001537400.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157916982|gb|ABV98409.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 555
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 120/311 (38%), Gaps = 57/311 (18%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+PIP L G + + G +LA + +G ++ WG + GQ + TP
Sbjct: 79 TPIPVSLPPGTTVTAIAAGDE-HSLALTSTGTVLAWGR-NRFGQLGDETNTSRSTPVTVS 136
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDF-GSAGSFQKDSTGKQS 158
LP +V AAG +H +++T G WG R+F G G + + K
Sbjct: 137 LPPGTTVTAIAAGRSHSLAITSTGSALAWG-----------RNFSGQLGDGTTNDSNKPV 185
Query: 159 ALPTEQAPP----SDKRAGE---EVVKRRKTSSA--REESENPASGDEFFTLSPCLVTLN 209
A+ PP + AG+ V T+ A R + G + +P V++
Sbjct: 186 AV---NLPPGTTVTAIAAGDGHSLAVTSAGTALAWGRNFAGQLGDGTTNDSTTPVTVSVA 242
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
PG +T +AAG H+L ++ G GWG G GQLG G+
Sbjct: 243 PGTTVTDIAAGRVHSLAITSAGTALGWGRNGSGQLGDGTTNDST---------------- 286
Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQRMAKCLAGD 329
+ + + +A G HS VT AG L G LYGQ GD
Sbjct: 287 ---------TPTTVSPPTGTVFTTVAAGEDHSLAVTSAGTALAAGDNLYGQL------GD 331
Query: 330 GINMGSWVWVT 340
G N S +VT
Sbjct: 332 GTNTSSNTFVT 342
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 84/216 (38%), Gaps = 16/216 (7%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
P+ L G + + G G +LA + +G + WG + GQ + TP +
Sbjct: 184 PVAVNLPPGTTVTAIAAGD-GHSLAVTSAGTALAWGR-NFAGQLGDGTTNDSTTPVTVSV 241
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
+V AAG H +++T AG WG S ++ + + + +
Sbjct: 242 APGTTVTDIAAGRVHSLAITSAGTALGWGRNG---SGQLGDGTTNDSTTPTTVSPPTGTV 298
Query: 161 PTEQAPPSDKRAGEE---VVKRRKTSSAREESENPASGDEFFTLSPCLVT--LNPGVKIT 215
T A AGE+ V T+ A ++ GD T S VT L P IT
Sbjct: 299 FTTVA------AGEDHSLAVTSAGTALAAGDNLYGQLGDGTNTSSNTFVTVSLPPSTTIT 352
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
+A G H L ++ G WG +GQLG G+
Sbjct: 353 AIAVGRFHNLGVTATGAALAWGINIDGQLGDGTTTN 388
>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
Length = 980
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 114/296 (38%), Gaps = 96/296 (32%)
Query: 30 GTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
G PE+ P L + L CG + +LA G++ WG+A EGQ L
Sbjct: 63 GEQPERIPALETLNVALVSCGKEH-----------SLAVCHKGRVFAWGAAS-EGQ--LG 108
Query: 88 SGKHGET---PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
G+ ET P+ +++ A G H V+++E G+V++WG T G
Sbjct: 109 IGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWG----------TNSHG 158
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPC 204
G GK+ P+ QA P R+ E
Sbjct: 159 QLG------LGKE--FPS-QASPQRVRSLE------------------------------ 179
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
G+ + +VAAGG H+ LS G +GWG GQL L
Sbjct: 180 ------GIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLAL------------------ 215
Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
SG + P V++ S G V I+CG +H+AV+T G + TFG YGQ
Sbjct: 216 --SGNNAP--VQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQ 267
>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
africana]
Length = 1050
Score = 70.1 bits (170), Expect = 2e-09, Method: Composition-based stats.
Identities = 85/322 (26%), Positives = 125/322 (38%), Gaps = 78/322 (24%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
FT SP V G+ + +V AGG H+ LS G V+GWG
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNN 218
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGG 298
GQLGL KDR P V+ V I+CG
Sbjct: 219 AGQLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGE 251
Query: 299 RHSAVVTDAGALLTFGWGLYGQ 320
H+AV+T G + TFG G GQ
Sbjct: 252 EHTAVLTKNGGVFTFGAGSCGQ 273
>gi|27085405|gb|AAN85438.1| inositol 5-phosphatase 2 [Dictyostelium discoideum]
Length = 1800
Score = 70.1 bits (170), Expect = 2e-09, Method: Composition-based stats.
Identities = 79/284 (27%), Positives = 113/284 (39%), Gaps = 69/284 (24%)
Query: 52 WKD-VCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVV 107
WK V CGF L TSE K+ + G + GQ + + P P ++ +V+
Sbjct: 72 WKRRVVSVSCGFNHTLLLTSEY-KIFSMG-FNQTGQLGIENVVDSAVPLPVDTLSKFNVI 129
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
K AG ++TEAG++Y WG + +G G+ K + S PT P
Sbjct: 130 KIKAGNNVSAAITEAGDLYCWG----------SSAYGQLGN-GKMNAKLHSFTPTTILNP 178
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
A E ++P + ++ T + G +HT+ +
Sbjct: 179 LIPDA---------------EKDDP---------------IYQNLQYTNICFGAQHTIAI 208
Query: 228 SDMGQVWGWGYGGEGQLGLG-SRIKMVPTP-HLIPCLEHAASGKDRPLLVRQGSVNSSG- 284
S G ++ WG GQLGLG K+VP P HL D R G +NS G
Sbjct: 209 STTGAIFSWGSNQYGQLGLGHCNAKLVPVPIHL-----------DNSFERRAGHINSLGE 257
Query: 285 --------KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
K V +IACG HSA++T G L +G YGQ
Sbjct: 258 IVTTDFTAKTIHRIVVDIACGNFHSALLTLEGDLFLWGSNQYGQ 301
>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 109/265 (41%), Gaps = 54/265 (20%)
Query: 69 SGKLI-TWGSADDEGQSYLTSGKHGETPEP-----FPLPTEASVVKAAAGWAHCVSVTE- 121
SG+++ +WG +D GQ L G + P P F +P SV+ G H ++ ++
Sbjct: 38 SGQMVCSWGRGED-GQ--LGHGDSEDRPVPTVLTSFDVPRVTSVI---CGADHTIAYSDD 91
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPSDKRAGEE 175
++Y+WGW DFG G F + +Q D
Sbjct: 92 EMQLYSWGWG----------DFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLTV 141
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ S R ++ G+ +L P + GV + +AAG HT +++ G ++G
Sbjct: 142 TFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYG 201
Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
WG+G G LGL R DR + + SV G V +A
Sbjct: 202 WGWGRYGNLGLSDR-------------------DDRSVPEKVSSVE-----GEKMVL-VA 236
Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQ 320
CG RHS V+ +GAL T+GW YGQ
Sbjct: 237 CGWRHSVSVSSSGALYTYGWSKYGQ 261
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 83/216 (38%), Gaps = 30/216 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G A +E G L WG G L+ PE +V A GW H VS
Sbjct: 186 GAEHTTAITEGGDLYGWGWGR-YGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVS 244
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAG--SFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
V+ +G +YT+GW + +G G FQ D + + P S G
Sbjct: 245 VSSSGALYTYGWSK----------YGQLGHGDFQ-DHLVPRKLEALKDVPISQISGG--- 290
Query: 177 VKRRKTSSAREESENPASG----------DEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
R T + E+ + G D SP V KI +VA G RHTL
Sbjct: 291 --WRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLA 348
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
L++ ++ WG G GQLG G I TP +I L
Sbjct: 349 LTENKNIFSWGRGASGQLGHGEIIDR-NTPKMIDAL 383
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 103/285 (36%), Gaps = 83/285 (29%)
Query: 36 SPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
S + +P P G K + G L + +G++ +WG + GQ L + + P
Sbjct: 112 SDVFNPQPIVALQGMKIKQIACGDS-HCLTVTFNGQVHSWGR-NQNGQLGLGNNQDSLLP 169
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
+ V AAG H ++TE G++Y WGW +G+ G +D
Sbjct: 170 QKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGR----------YGNLGLSDRD--- 216
Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
D+ E K SS G K+
Sbjct: 217 -------------DRSVPE------KVSSVE------------------------GEKMV 233
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
VA G RH++ +S G ++ +G+ GQLG G HL+P A KD P
Sbjct: 234 LVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDF-----QDHLVPRKLEAL--KDVP--- 283
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +I+ G RH+ V + G L +GW +GQ
Sbjct: 284 ---------------ISQISGGWRHTMAVAEDGKLYGWGWNKFGQ 313
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 42 IPARLCGGDSWKDV----CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
+P +L ++ KDV GG +A +E GKL WG + GQ + +P
Sbjct: 272 VPRKL---EALKDVPISQISGGWRHTMAVAEDGKLYGWG-WNKFGQVGVEDNVDHCSPVE 327
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P E +V+ A GW H +++TE +++WG
Sbjct: 328 VNFPDEQKIVQVACGWRHTLALTENKNIFSWG 359
>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 101/260 (38%), Gaps = 44/260 (16%)
Query: 69 SGKLI-TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE-VY 126
SG L+ +WG +D GQ + P + + G H +++ + + VY
Sbjct: 31 SGDLVCSWGRGED-GQLGHGDAEERHFPTIVSALDDCEISSVTCGADHTTALSNSTKTVY 89
Query: 127 TWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
+WGW DFG G F L +Q D
Sbjct: 90 SWGWG----------DFGRLGHGNSSDLFIPQPIKALKGLEVKQIACGDSHCLAITTDGE 139
Query: 181 KTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
R ++ G L+P +T GV + +AAG HT +++ G+++GWG+G
Sbjct: 140 VLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTENGKLYGWGWGR 199
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
G LGLG R L+P A +G+ +K +ACG RH
Sbjct: 200 YGNLGLGDR-----EDRLVPDQVAAVAGE--------------------LMKMVACGWRH 234
Query: 301 SAVVTDAGALLTFGWGLYGQ 320
+ V ++G + TFGW YGQ
Sbjct: 235 TICVAESGNMYTFGWSKYGQ 254
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 117/313 (37%), Gaps = 54/313 (17%)
Query: 21 VVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGS 77
VY WG + S + P P + G K + G LA + G+++ WG
Sbjct: 87 TVYSWGWGDFGRLGHGNSSDLFIPQPIKALKGLEVKQIACGDS-HCLAITTDGEVLGWGR 145
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
+ GQ L + TP +V AAG H +VTE G++Y WGW
Sbjct: 146 -NQNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTENGKLYGWGWGR----- 199
Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE------- 190
+G+ G ++ +P + A + + R T E
Sbjct: 200 -----YGNLGLGDRED----RLVPDQVAAVAGELMKMVACGWRHTICVAESGNMYTFGWS 250
Query: 191 ---NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
GD L P V KI + G RHT L G+++GWG+ GQ+G G
Sbjct: 251 KYGQLGHGDFADHLIPHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGCG 310
Query: 248 SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA 307
+ + +P L+ L+ D+ + V Q CG RH+ +TD
Sbjct: 311 N-TEDQSSPQLVKGLQ------DQVVTVVQ------------------CGWRHTLAMTDR 345
Query: 308 GALLTFGWGLYGQ 320
G + ++G G GQ
Sbjct: 346 GNVYSWGRGTSGQ 358
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 77/214 (35%), Gaps = 26/214 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G A +E+GKL WG G L + P+ + A GW H +
Sbjct: 179 GAEHTTAVTENGKLYGWGWGR-YGNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHTIC 237
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
V E+G +YT+GW + +G G +P + K+
Sbjct: 238 VAESGNMYTFGWSK----------YGQLGH----GDFADHLIPHQVQALKSKKIQAITGG 283
Query: 179 RRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
R T + + G+ SP LV +T V G RHTL ++
Sbjct: 284 WRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAMT 343
Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
D G V+ WG G GQLG G + TP I L
Sbjct: 344 DRGNVYSWGRGTSGQLGHGDTVDR-STPKRIEIL 376
>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 109/265 (41%), Gaps = 54/265 (20%)
Query: 69 SGKLI-TWGSADDEGQSYLTSGKHGETPEP-----FPLPTEASVVKAAAGWAHCVSVTE- 121
SG+++ +WG +D GQ L G + P P F +P SV+ G H ++ ++
Sbjct: 38 SGQMVCSWGRGED-GQ--LGHGDSEDRPVPTVLTSFDVPRVTSVI---CGADHTIAYSDD 91
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPSDKRAGEE 175
++Y+WGW DFG G F + +Q D
Sbjct: 92 EMQLYSWGWG----------DFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLTV 141
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ S R ++ G+ +L P + GV + +AAG HT +++ G ++G
Sbjct: 142 TFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYG 201
Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
WG+G G LGL R DR + + SV G V +A
Sbjct: 202 WGWGRYGNLGLSDR-------------------DDRSVPEKVSSVE-----GEKMVL-VA 236
Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQ 320
CG RHS V+ +GAL T+GW YGQ
Sbjct: 237 CGWRHSVSVSSSGALYTYGWSKYGQ 261
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 83/216 (38%), Gaps = 30/216 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G A +E G L WG G L+ PE +V A GW H VS
Sbjct: 186 GAEHTTAITEGGDLYGWGWGR-YGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVS 244
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAG--SFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
V+ +G +YT+GW + +G G FQ D + + P S G
Sbjct: 245 VSSSGALYTYGWSK----------YGQLGHGDFQ-DHLVPRKLEALKDVPISQISGG--- 290
Query: 177 VKRRKTSSAREESENPASG----------DEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
R T + E+ + G D SP V KI +VA G RHTL
Sbjct: 291 --WRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLA 348
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
L++ ++ WG G GQLG G I TP +I L
Sbjct: 349 LTENKNIFSWGRGASGQLGHGEIIDR-NTPKMIDAL 383
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 103/285 (36%), Gaps = 83/285 (29%)
Query: 36 SPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
S + +P P G K + G L + +G++ +WG + GQ L + + P
Sbjct: 112 SDVFNPQPIVALQGMKIKQIACGDS-HCLTVTFNGQVHSWGR-NQNGQLGLGNNQDSLLP 169
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
+ V AAG H ++TE G++Y WGW +G+ G +D
Sbjct: 170 QKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGR----------YGNLGLSDRD--- 216
Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
D+ E K SS G K+
Sbjct: 217 -------------DRSVPE------KVSSVE------------------------GEKMV 233
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
VA G RH++ +S G ++ +G+ GQLG G HL+P A KD P
Sbjct: 234 LVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDF-----QDHLVPRKLEAL--KDVP--- 283
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +I+ G RH+ V + G L +GW +GQ
Sbjct: 284 ---------------ISQISGGWRHTMAVAEDGKLYGWGWNKFGQ 313
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 42 IPARLCGGDSWKDV----CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
+P +L ++ KDV GG +A +E GKL WG + GQ + +P
Sbjct: 272 VPRKL---EALKDVPISQISGGWRHTMAVAEDGKLYGWG-WNKFGQVGVEDNVDHCSPVE 327
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P E +V+ A GW H +++TE +++WG
Sbjct: 328 VNFPDEQKIVQVACGWRHTLALTENKNIFSWG 359
>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Cricetulus griseus]
Length = 1057
Score = 70.1 bits (170), Expect = 2e-09, Method: Composition-based stats.
Identities = 80/313 (25%), Positives = 118/313 (37%), Gaps = 91/313 (29%)
Query: 38 ILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
+L P + +DV GCG + + G + T G +D GQ L K + P
Sbjct: 22 VLEPRKSDFFANKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKP 75
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
E ++V + G AH +++ + G+VY+WG DS G
Sbjct: 76 EQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGL---------------------DSDG 114
Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
+ L +E E + R S + ++I
Sbjct: 115 QLGLLGSE----------EYIRVPRNIKSLSD------------------------IQIV 140
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGK 269
+VA G H+L LS +V+ WG GQLGLG K +P L IP ++ AA G
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGA 200
Query: 270 DRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAVVTDA 307
+L G++ N G+ G + YV I CG H+A +T
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 308 GALLTFGWGLYGQ 320
G + TFG G YGQ
Sbjct: 261 GGVFTFGAGGYGQ 273
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 69/278 (24%), Positives = 109/278 (39%), Gaps = 45/278 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ +WG D L S ++ P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ--KDSTGKQS-----ALPTE 163
G+ H +++++A EV+ WG + +G G K T Q +P
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK----------YGQLGLGIDCKKQTSPQLIKSLLGIPFM 193
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
Q + + R + DE P L+ KI + G H
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
T L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI--- 295
Query: 284 GKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V ++ACG +H SA V +G + +FG G GQ
Sbjct: 296 -------VTQVACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Cricetulus griseus]
Length = 1049
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 80/313 (25%), Positives = 118/313 (37%), Gaps = 91/313 (29%)
Query: 38 ILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
+L P + +DV GCG + + G + T G +D GQ L K + P
Sbjct: 22 VLEPRKSDFFANKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKP 75
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
E ++V + G AH +++ + G+VY+WG DS G
Sbjct: 76 EQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGL---------------------DSDG 114
Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
+ L +E E + R S + ++I
Sbjct: 115 QLGLLGSE----------EYIRVPRNIKSLSD------------------------IQIV 140
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGK 269
+VA G H+L LS +V+ WG GQLGLG K +P L IP ++ AA G
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGA 200
Query: 270 DRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAVVTDA 307
+L G++ N G+ G + YV I CG H+A +T
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 308 GALLTFGWGLYGQ 320
G + TFG G YGQ
Sbjct: 261 GGVFTFGAGGYGQ 273
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 69/278 (24%), Positives = 109/278 (39%), Gaps = 45/278 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ +WG D L S ++ P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ--KDSTGKQS-----ALPTE 163
G+ H +++++A EV+ WG + +G G K T Q +P
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK----------YGQLGLGIDCKKQTSPQLIKSLLGIPFM 193
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
Q + + R + DE P L+ KI + G H
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
T L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI--- 295
Query: 284 GKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V ++ACG +H SA V +G + +FG G GQ
Sbjct: 296 -------VTQVACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
Length = 913
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 131/334 (39%), Gaps = 83/334 (24%)
Query: 25 WGY----LPGTSPEKSPILS-PIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSA 78
WGY PG S I++ P R S K+V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLL--EDGEVYTCG-V 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA-------- 110
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 111 -----GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
FT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGG 298
GQLGL KDR P V+ V I+CG
Sbjct: 219 AGQLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGE 251
Query: 299 RHSAVVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
H+AV+T +G + TFG G GQ L D +N
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQ-----LGHDSVN 280
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 109/276 (39%), Gaps = 41/276 (14%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+ + CG +LA S+ G+L +WG+ D +T+ P + ++++ +
Sbjct: 84 QHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVS 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G HC+++ G+ +TWG + + ++F S T Q E P +
Sbjct: 144 CGNWHCLALAADGQFFTWG-KNSHGQLGLGKEFPS-------QTSPQRVRSLEGIPLAQV 195
Query: 171 RAGEEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
AG S A + DE SPC V L K+ ++ G HT
Sbjct: 196 AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA 255
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
+L+ G V+ +G G GQLG S V R +L G
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSVNDEV---------------NPRRVLELMG------- 293
Query: 286 AGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQ 320
S V +IACG +H+ A+V +G + FG G GQ
Sbjct: 294 ---SEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQ 326
>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Meleagris gallopavo]
Length = 1056
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 74/292 (25%), Positives = 108/292 (36%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKARKRPEHVGALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG +T Q LP EE
Sbjct: 97 LALNDKGQVYAWGL----------------------ATDGQLGLP----------GTEEC 124
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
++ + + E ++I +VA G H+L LS +V+ W
Sbjct: 125 IRVPRNIKSLSE-----------------------IQIVQVACGYYHSLALSKGSEVFSW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG K +PH+ IP + AA G +L G++ N G+
Sbjct: 162 GQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 286 AG-----------------RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G V I CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 66/279 (23%), Positives = 110/279 (39%), Gaps = 47/279 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKA 109
+++ CG A LA ++ G++ WG A D GQ L + P +E +V+
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLATD-GQLGLPGTEECIRVPRNIKSLSEIQIVQV 142
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDST----GKQSALPT 162
A G+ H +++++ EV++WG + +G G ++K ++ +P
Sbjct: 143 ACGYYHSLALSKGSEVFSWGQNK----------YGQLGLGYEYKKQNSPHVIKSLLGIPF 192
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + R + D+ P L+ K+ + G
Sbjct: 193 AQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGED 252
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
HT L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSL-- 295
Query: 283 SGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +I CG +H +A V +G + +FG G GQ
Sbjct: 296 --------VTQITCGRQHTTAFVPSSGRIYSFGLGGNGQ 326
>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Meleagris gallopavo]
Length = 1048
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 74/292 (25%), Positives = 108/292 (36%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKARKRPEHVGALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG +T Q LP EE
Sbjct: 97 LALNDKGQVYAWGL----------------------ATDGQLGLP----------GTEEC 124
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
++ + + E ++I +VA G H+L LS +V+ W
Sbjct: 125 IRVPRNIKSLSE-----------------------IQIVQVACGYYHSLALSKGSEVFSW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG K +PH+ IP + AA G +L G++ N G+
Sbjct: 162 GQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 286 AG-----------------RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G V I CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 66/279 (23%), Positives = 110/279 (39%), Gaps = 47/279 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKA 109
+++ CG A LA ++ G++ WG A D GQ L + P +E +V+
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLATD-GQLGLPGTEECIRVPRNIKSLSEIQIVQV 142
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDST----GKQSALPT 162
A G+ H +++++ EV++WG + +G G ++K ++ +P
Sbjct: 143 ACGYYHSLALSKGSEVFSWGQNK----------YGQLGLGYEYKKQNSPHVIKSLLGIPF 192
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + R + D+ P L+ K+ + G
Sbjct: 193 AQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGED 252
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
HT L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSL-- 295
Query: 283 SGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +I CG +H +A V +G + +FG G GQ
Sbjct: 296 --------VTQITCGRQHTTAFVPSSGRIYSFGLGGNGQ 326
>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
gallus]
Length = 1056
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 74/292 (25%), Positives = 108/292 (36%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKARKRPEHVGALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG +T Q LP EE
Sbjct: 97 LALNDKGQVYAWGL----------------------ATDGQLGLP----------GTEEC 124
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
++ + + E ++I +VA G H+L LS +V+ W
Sbjct: 125 IRVPRNIKSLSE-----------------------IQIVQVACGYYHSLALSKGSEVFSW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG K +PH+ IP + AA G +L G++ N G+
Sbjct: 162 GQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 286 AG-----------------RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G V I CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 66/279 (23%), Positives = 110/279 (39%), Gaps = 47/279 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKA 109
+++ CG A LA ++ G++ WG A D GQ L + P +E +V+
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLATD-GQLGLPGTEECIRVPRNIKSLSEIQIVQV 142
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDST----GKQSALPT 162
A G+ H +++++ EV++WG + +G G ++K ++ +P
Sbjct: 143 ACGYYHSLALSKGSEVFSWGQNK----------YGQLGLGYEYKKQNSPHVIKSLLGIPF 192
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + R + D+ P L+ K+ + G
Sbjct: 193 AQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGED 252
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
HT L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSL-- 295
Query: 283 SGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +I CG +H +A V +G + +FG G GQ
Sbjct: 296 --------VTQITCGRQHTTAFVPSSGRIYSFGLGGNGQ 326
>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
Length = 913
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 131/334 (39%), Gaps = 83/334 (24%)
Query: 25 WGY----LPGTSPEKSPILS-PIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSA 78
WGY PG S I++ P R S K+V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLL--EDGEVYTCG-V 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA-------- 110
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 111 -----GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
FT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGG 298
GQLGL KDR P V+ V I+CG
Sbjct: 219 AGQLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGE 251
Query: 299 RHSAVVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
H+AV+T +G + TFG G GQ L D +N
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQ-----LGHDSVN 280
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 109/276 (39%), Gaps = 41/276 (14%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+ + CG +LA S+ G+L +WG+ D +T+ P + ++++ +
Sbjct: 84 QHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVS 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G HC+++ G+ +TWG + + ++F S T Q E P +
Sbjct: 144 CGNWHCLALAADGQFFTWG-KNSHGQLGLGKEFPS-------QTSPQRVRSLEGIPLAQV 195
Query: 171 RAGEEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
AG S A + DE SPC V L K+ ++ G HT
Sbjct: 196 AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA 255
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
+L+ G V+ +G G GQLG S V R +L G
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSVNDEV---------------NPRRVLELMG------- 293
Query: 286 AGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQ 320
S V +IACG +H+ A+V +G + FG G GQ
Sbjct: 294 ---SEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQ 326
>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
Length = 1050
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 132/332 (39%), Gaps = 79/332 (23%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
WGY P SP L + A ++CG S + V CG ++ E G++ T G A+
Sbjct: 4 WGYWSLGQPGISPNLQGVVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-ANT 62
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
+GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 63 KGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGA---------- 110
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
GS G +T A+P ++ ++ + + S A+ +FFT
Sbjct: 111 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 160
Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
SP V G+ + +V AGG H+ LS G V+GWG G
Sbjct: 161 WGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
QLGL KDR P V+ V I+CG H
Sbjct: 221 QLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGEEH 253
Query: 301 SAVVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
+AV+T +G + TFG G GQ L D +N
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQ-----LGHDSMN 280
>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
Length = 1031
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 131/330 (39%), Gaps = 75/330 (22%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
WGY P S L I A ++CG S + V CG ++ E G++ T G +
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 62
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
+GQ L G+ G PE + +V A G +H +++++ G++++WG
Sbjct: 63 KGQ--LGHGREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGA---------- 110
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
GS G +T A+P ++ ++ + + S A+ +FFT
Sbjct: 111 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 160
Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
SP V G+ + +VAAGG H+ LS G V+GWG G
Sbjct: 161 WGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
QLGL E S LL Q V I+CG H+A
Sbjct: 221 QLGLSDE-------------EDRESPCHVKLLRTQKVV------------YISCGEEHTA 255
Query: 303 VVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
V+T +G + TFG G GQ L D +N
Sbjct: 256 VLTKSGGVFTFGAGSCGQ-----LGHDSMN 280
>gi|321452330|gb|EFX63739.1| hypothetical protein DAPPUDRAFT_267802 [Daphnia pulex]
Length = 727
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 61/128 (47%), Gaps = 20/128 (15%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL---EHAASGK 269
IT+VA G +HTL ++ G+++ WG GQLGL M+PTP ++ L + K
Sbjct: 37 NITQVACGAQHTLAQNEWGEIFAWGSNSNGQLGLNVEESMIPTPKMVKSLATKQMIVKSK 96
Query: 270 DRPLLVRQGSVNSSGKAGR-----------------SYVKEIACGGRHSAVVTDAGALLT 312
+R G NS G+ G V I CG H+A +T G +LT
Sbjct: 97 LFRSCLRLGPKNSFGQLGLGDTVDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVLT 156
Query: 313 FGWGLYGQ 320
FG G+YGQ
Sbjct: 157 FGEGMYGQ 164
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 211 GVKITKVAAGGRHTL-ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI--PCLEHAAS 267
G +T++ G HTL + +++ +G GG GQLG S V +PHL+ P S
Sbjct: 184 GTTVTQICCGRCHTLAFVPSKDRIYAFGLGGSGQLGTKSTAN-VNSPHLVIGPWETSNNS 242
Query: 268 GKD-RPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
KD + L S+ ++ R V+ I CGG S
Sbjct: 243 IKDVKDLATETADALSAIQSKRVVVRNIFCGGDQS 277
>gi|66809941|ref|XP_638694.1| inositol 5-phosphatase [Dictyostelium discoideum AX4]
gi|60467249|gb|EAL65282.1| inositol 5-phosphatase [Dictyostelium discoideum AX4]
Length = 1800
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 79/284 (27%), Positives = 113/284 (39%), Gaps = 69/284 (24%)
Query: 52 WKD-VCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVV 107
WK V CGF L TSE K+ + G + GQ + + P P ++ +V+
Sbjct: 72 WKRRVVSVSCGFNHTLLLTSEY-KIFSMG-FNQTGQLGIENVVDSAVPLPVDTLSKFNVI 129
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
K AG ++TEAG++Y WG + +G G+ K + S PT P
Sbjct: 130 KIKAGNNVSAAITEAGDLYCWG----------SSAYGQLGN-GKMNAKLHSFTPTTILNP 178
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
A E ++P + ++ T + G +HT+ +
Sbjct: 179 LIPDA---------------EKDDP---------------IYQNLQYTNICFGAQHTIAI 208
Query: 228 SDMGQVWGWGYGGEGQLGLG-SRIKMVPTP-HLIPCLEHAASGKDRPLLVRQGSVNSSG- 284
S G ++ WG GQLGLG K+VP P HL D R G +NS G
Sbjct: 209 STTGAIFSWGSNQYGQLGLGHCNAKLVPVPIHL-----------DNSFERRAGHINSLGE 257
Query: 285 --------KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
K V +IACG HSA++T G L +G YGQ
Sbjct: 258 IVTTDFTAKTIHRIVVDIACGNFHSALLTLEGDLFLWGSNQYGQ 301
>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 909
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 131/334 (39%), Gaps = 83/334 (24%)
Query: 25 WGY----LPGTSPEKSPILS-PIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSA 78
WGY PG S I++ P R S K+V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLL--EDGEVYTCG-V 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA-------- 110
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 111 -----GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
FT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGG 298
GQLGL KDR P V+ V I+CG
Sbjct: 219 AGQLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGE 251
Query: 299 RHSAVVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
H+AV+T +G + TFG G GQ L D +N
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQ-----LGHDSVN 280
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 109/276 (39%), Gaps = 41/276 (14%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+ + CG +LA S+ G+L +WG+ D +T+ P + ++++ +
Sbjct: 84 QHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVS 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G HC+++ G+ +TWG + + ++F S T Q E P +
Sbjct: 144 CGNWHCLALAADGQFFTWG-KNSHGQLGLGKEFPS-------QTSPQRVRSLEGIPLAQV 195
Query: 171 RAGEEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
AG S A + DE SPC V L K+ ++ G HT
Sbjct: 196 AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA 255
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
+L+ G V+ +G G GQLG S V R +L G
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSVNDEV---------------NPRRVLELMG------- 293
Query: 286 AGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQ 320
S V +IACG +H+ A+V +G + FG G GQ
Sbjct: 294 ---SEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQ 326
>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 131/334 (39%), Gaps = 83/334 (24%)
Query: 25 WGY----LPGTSPEKSPILS-PIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSA 78
WGY PG S I++ P R S K+V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLL--EDGEVYTCG-V 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA-------- 110
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 111 -----GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
FT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGG 298
GQLGL KDR P V+ V I+CG
Sbjct: 219 AGQLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGE 251
Query: 299 RHSAVVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
H+AV+T +G + TFG G GQ L D +N
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQ-----LGHDSVN 280
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 109/276 (39%), Gaps = 41/276 (14%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+ + CG +LA S+ G+L +WG+ D +T+ P + ++++ +
Sbjct: 84 QHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVS 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G HC+++ G+ +TWG + + ++F S T Q E P +
Sbjct: 144 CGNWHCLALAADGQFFTWG-KNSHGQLGLGKEFPS-------QTSPQRVRSLEGIPLAQV 195
Query: 171 RAGEEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
AG S A + DE SPC V L K+ ++ G HT
Sbjct: 196 AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA 255
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
+L+ G V+ +G G GQLG S V R +L G
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSVNDEV---------------NPRRVLELMG------- 293
Query: 286 AGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQ 320
S V +IACG +H+ A+V +G + FG G GQ
Sbjct: 294 ---SEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQ 326
>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Cricetulus griseus]
Length = 631
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 127/322 (39%), Gaps = 78/322 (24%)
Query: 25 WGY----LPGTSPEKSPILS-PIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSA 78
WGY PG S I++ P R S K+V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISSNLRGIVAEPQVCRFVSDRSIKEVACGGNHSVFLL--EDGEVYTCG-V 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 61 NSKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGA-------- 110
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 111 -----GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
FT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGG 298
GQLGL KDR P V+ V I+CG
Sbjct: 219 AGQLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGE 251
Query: 299 RHSAVVTDAGALLTFGWGLYGQ 320
H+AV+T +G + TFG G GQ
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQ 273
>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 131/334 (39%), Gaps = 83/334 (24%)
Query: 25 WGY----LPGTSPEKSPILS-PIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSA 78
WGY PG S I++ P R S K+V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLL--EDGEVYTCG-V 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA-------- 110
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 111 -----GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
FT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGG 298
GQLGL KDR P V+ V I+CG
Sbjct: 219 AGQLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGE 251
Query: 299 RHSAVVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
H+AV+T +G + TFG G GQ L D +N
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQ-----LGHDSVN 280
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 109/276 (39%), Gaps = 41/276 (14%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+ + CG +LA S+ G+L +WG+ D +T+ P + ++++ +
Sbjct: 84 QHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVS 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G HC+++ G+ +TWG + + ++F S T Q E P +
Sbjct: 144 CGNWHCLALAADGQFFTWG-KNSHGQLGLGKEFPS-------QTSPQRVRSLEGIPLAQV 195
Query: 171 RAGEEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
AG S A + DE SPC V L K+ ++ G HT
Sbjct: 196 AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA 255
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
+L+ G V+ +G G GQLG S V R +L G
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSVNDEV---------------NPRRVLELMG------- 293
Query: 286 AGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQ 320
S V +IACG +H+ A+V +G + FG G GQ
Sbjct: 294 ---SEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQ 326
>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
Length = 1050
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 76/283 (26%), Positives = 108/283 (38%), Gaps = 68/283 (24%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
CGG L E G++ T G + +GQ L G PEP +V A G +H
Sbjct: 41 CGGNHSVFLL--EDGEVYTCG-LNTKGQ--LGHESEGSKPEPIGALAGQHIVHVACGESH 95
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V++++ G+V++WG GS G G + P K+ ++
Sbjct: 96 SVALSDQGQVFSWG-------------AGSDGQL-----GLTTIEDAVTVPRLIKKLNQQ 137
Query: 176 VVKRRKTSSAREESENPASGDEFFT------------------LSPCLVTLNPGVKITKV 217
+ + S A+ +FFT SP V G+ + +V
Sbjct: 138 TI--LQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQV 195
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
AAGG H+ LS G V+GWG GQLGL H+ LL Q
Sbjct: 196 AAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHV-------------KLLRSQ 242
Query: 278 GSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V I+CG H+AV+T +G + TFG G GQ
Sbjct: 243 KVV------------YISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 67/266 (25%), Positives = 108/266 (40%), Gaps = 33/266 (12%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTEASVVKAAAGWAH 115
CG ++A S+ G++ +WG+ D GQ LT+ + T P + ++++ + G H
Sbjct: 90 ACGESHSVALSDQGQVFSWGAGSD-GQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWH 148
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
C+++ G+ +TWG + + ++ S S Q+ +P Q +
Sbjct: 149 CLALAADGQFFTWG-QNSYGQLGLGKECPSQASPQR--VKSLDGIPLAQVAAGGAHSFAL 205
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ + S DE SPC V L K+ ++ G HT +L+ G V+
Sbjct: 206 SLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
+G G GQLG S V R +L G S V +IA
Sbjct: 266 FGAGSCGQLGHDSMNDEV---------------NPRRVLELMG----------SEVSQIA 300
Query: 296 CGGRHS-AVVTDAGALLTFGWGLYGQ 320
CG H+ A V +G + FG G GQ
Sbjct: 301 CGRHHTLAFVPSSGMIYAFGCGTRGQ 326
Score = 42.4 bits (98), Expect = 0.31, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 29/108 (26%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG-KDRP 272
+ +VA GG H++ L + G+V+ G +GQLG H + G K P
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG------------------HESEGSKPEP 77
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ G ++ +ACG HS ++D G + ++G G GQ
Sbjct: 78 I----------GALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQ 115
>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 1050
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 131/334 (39%), Gaps = 83/334 (24%)
Query: 25 WGY----LPGTSPEKSPILS-PIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSA 78
WGY PG S I++ P R S K+V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLL--EDGEVYTCG-V 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA-------- 110
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 111 -----GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
FT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGG 298
GQLGL KDR P V+ V I+CG
Sbjct: 219 AGQLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGE 251
Query: 299 RHSAVVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
H+AV+T +G + TFG G GQ L D +N
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQ-----LGHDSVN 280
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 109/276 (39%), Gaps = 41/276 (14%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+ + CG +LA S+ G+L +WG+ D +T+ P + ++++ +
Sbjct: 84 QHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVS 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G HC+++ G+ +TWG + + ++F S T Q E P +
Sbjct: 144 CGNWHCLALAADGQFFTWG-KNSHGQLGLGKEFPS-------QTSPQRVRSLEGIPLAQV 195
Query: 171 RAGEEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
AG S A + DE SPC V L K+ ++ G HT
Sbjct: 196 AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA 255
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
+L+ G V+ +G G GQLG S V R +L G
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSVNDEV---------------NPRRVLELMG------- 293
Query: 286 AGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQ 320
S V +IACG +H+ A+V +G + FG G GQ
Sbjct: 294 ---SEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQ 326
>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
Length = 477
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 124/301 (41%), Gaps = 54/301 (17%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
G E+S I + L + K+VC GG A+ T SG+LI WG G L G
Sbjct: 22 GAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVIT-HSGELIVWGYG---GCGQLGLG 77
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
+ P + + +V+ + H ++ E G +YTWG C S K+ GS
Sbjct: 78 DLKDIVIPRVMTSIKNVINVSCSDRHSAAILEDGRLYTWG---CNKSGKL-----GIGSL 129
Query: 150 QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS--SAREESENPA------------SG 195
+ P +K E+V+K S +A N A G
Sbjct: 130 NVNLNNNIICTP----QLVEKLLNEKVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLGHG 185
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
D +P L+ G+ + + GG HT IL + G+V+ G G G+LG GS+ + +
Sbjct: 186 DTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGKLGFGSK-EDIYI 244
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
P L+ QGS+ + +KE++ G +HSAV+T G + T+G
Sbjct: 245 PKLL-----------------QGSLTNKS------IKEVSLGYQHSAVITTKGKVYTWGQ 281
Query: 316 G 316
G
Sbjct: 282 G 282
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 25/119 (21%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P LV K+ KV+ G HT L+D+ + + WG G +G+LG G V TP LI
Sbjct: 140 TPQLVEKLLNEKVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLGHGDT-NDVYTPKLIES 198
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
L AG S VK I CGG H+A++ + G + G G +G+
Sbjct: 199 L-----------------------AGLS-VKNIVCGGHHTAILLNNGKVYFCGGGAFGK 233
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 33/140 (23%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH----AASG 268
+I +V GG H+ +++ G++ WGYGG GQLGLG +K + P ++ +++ + S
Sbjct: 43 RIKEVCCGGHHSAVITHSGELIVWGYGGCGQLGLGD-LKDIVIPRVMTSIKNVINVSCSD 101
Query: 269 KDRPLLVRQGSV-----NSSGKAG-----------------------RSYVKEIACGGRH 300
+ ++ G + N SGK G V +++CG H
Sbjct: 102 RHSAAILEDGRLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFH 161
Query: 301 SAVVTDAGALLTFGWGLYGQ 320
+A +TD T+G G+ G+
Sbjct: 162 TACLTDLNKAYTWGLGMQGR 181
>gi|328712024|ref|XP_001948029.2| PREDICTED: hypothetical protein LOC100158844 [Acyrthosiphon pisum]
Length = 1626
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 72/264 (27%), Positives = 116/264 (43%), Gaps = 54/264 (20%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP---LPTEASVVKAAAGWA 114
GG ++ + +GK+ T+GS GQ L +G + P P LP + A +
Sbjct: 959 GGYSHSIILTSNGKVFTFGSGS-FGQ--LGNGSTTKITSPVPVYGLPEPIKCIYTA--YF 1013
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H +++++ G +YTWG S +V R F S KRA
Sbjct: 1014 HNLALSDVGRLYTWG-----SSPQVLR-------FHAQS---------------QKRARN 1046
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLV-TLNPGVKITKVAAGGRHTLILSDMGQV 233
++V + E + + D LSP LV T + I ++ G H+ ++S GQ+
Sbjct: 1047 QLVLNEGDQADDAEIDALTADDGLLHLSPTLVDTSHISGDIFQMCCGCHHSAVISTTGQL 1106
Query: 234 WGWGYGGEGQLGL-GSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
+ WG +GQLG+ G R ++VPT L+ P ++ V+SS +G S +K
Sbjct: 1107 YTWGLNLDGQLGVSGIRERLVPTVTLV----------GPPSVI----VDSSSTSG-SLIK 1151
Query: 293 EIACGGRHSAVVTDAGALLTFGWG 316
E+ CG + + A L +GWG
Sbjct: 1152 EVRCGADFTLALDAANKL--WGWG 1173
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 72/270 (26%), Positives = 103/270 (38%), Gaps = 95/270 (35%)
Query: 59 GCGFALATS-ESGKLITWGSADDEGQSY--LTSGKH-GETPEPFPLP----TEASVVKAA 110
G G+A A + KL TWG + SY L G H +T P P+ V++ A
Sbjct: 801 GAGWAHAAHIRNHKLYTWGHS-----SYGCLGVGPHMTKTATPNPVSWFVYIRVEVIQVA 855
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G H +++T G VY+WG + +G G TG++ QAP
Sbjct: 856 CGRNHSIALTTNG-VYSWG----------SNHYGQLG------TGRRG-----QAP---- 889
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
P LV I V+AG H+L +S
Sbjct: 890 -------------------------------YPMLVDSLSNELIVSVSAGQYHSLAISAS 918
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
GQ+W WG+G GQLG G+ I P L+ LE+ + +++ G
Sbjct: 919 GQLWTWGWGVYGQLGHGA-IDDCEKPKLLKSLEN------------ENIISAYG------ 959
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G HS ++T G + TFG G +GQ
Sbjct: 960 ------GYSHSIILTSNGKVFTFGSGSFGQ 983
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 76/327 (23%), Positives = 130/327 (39%), Gaps = 53/327 (16%)
Query: 22 VYMWGYLP----GTSPEKSPILSPIPARLCGGDSW---------KDVCGGGCGFALATSE 68
+Y WG+ G P + +P P SW + CG AL T+
Sbjct: 815 LYTWGHSSYGCLGVGPHMTKTATPNPV------SWFVYIRVEVIQVACGRNHSIALTTN- 867
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGEVY 126
+ +WGS + GQ L +G+ G+ P P + + ++ +V +AG H ++++ +G+++
Sbjct: 868 --GVYSWGS-NHYGQ--LGTGRRGQAPYPMLVDSLSNELIVSVSAGQYHSLAISASGQLW 922
Query: 127 TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR 186
TWGW +G G D K L + + G TS+ +
Sbjct: 923 TWGWGV----------YGQLGHGAIDDCEKPKLLKSLENENIISAYGGYSHSIILTSNGK 972
Query: 187 EESENPAS------GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG--- 237
+ S G SP V P I + H L LSD+G+++ WG
Sbjct: 973 VFTFGSGSFGQLGNGSTTKITSPVPVYGLPE-PIKCIYTAYFHNLALSDVGRLYTWGSSP 1031
Query: 238 ----YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
+ + Q +++ + A + D L + V++S +G + +
Sbjct: 1032 QVLRFHAQSQKRARNQLVLNEGDQADDAEIDALTADDGLLHLSPTLVDTSHISGDIF--Q 1089
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ CG HSAV++ G L T+G L GQ
Sbjct: 1090 MCCGCHHSAVISTTGQLYTWGLNLDGQ 1116
>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
Length = 1052
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 76/310 (24%), Positives = 117/310 (37%), Gaps = 97/310 (31%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
D+ GCG + + GKL ++G +D GQ L + EP ++ + A
Sbjct: 35 DIVQVGCGENHTILVMKDGKLFSFG-LNDYGQ--LGHCRSRTRAEPVDGLEAHNITQVAC 91
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G H ++ E GEV+ WG S + Q ++S +PT +
Sbjct: 92 GAQHTLAQNEWGEVFAWG---------------SNSNGQLGLNVEESMMPTPK------- 129
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+VK T ++ ++A G H++ L+++G
Sbjct: 130 ----MVKSLATK-----------------------------QVVQIACGRSHSMALTNVG 156
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL---------EHAASGKDRPLLVR-QGSV- 280
+++ WG GQLGLGS TP PCL H + G D V G+V
Sbjct: 157 EIYCWGSNSHGQLGLGSS----GTPETKPCLVKLLQGIPISHISCGADFSFAVTPSGAVY 212
Query: 281 ----NSSGKAGR-----------------SYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
NS G+ G V I CG H+A +T G + TFG G+YG
Sbjct: 213 GWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVFTFGAGMYG 272
Query: 320 QRMAKCLAGD 329
Q + C + +
Sbjct: 273 Q-LGHCTSAN 281
Score = 46.2 bits (108), Expect = 0.021, Method: Composition-based stats.
Identities = 77/304 (25%), Positives = 119/304 (39%), Gaps = 46/304 (15%)
Query: 22 VYMWGYLP----GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITW 75
V+ WG G + E+S + +P ++ + K V CG ++A + G++ W
Sbjct: 105 VFAWGSNSNGQLGLNVEESMMPTP---KMVKSLATKQVVQIACGRSHSMALTNVGEIYCW 161
Query: 76 GSADDEGQSYLTSGKHGETPEPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
GS + GQ L G G TPE P L + + G +VT +G VY WG
Sbjct: 162 GS-NSHGQ--LGLGSSG-TPETKPCLVKLLQGIPISHISCGADFSFAVTPSGAVYGWG-- 215
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN 191
FG G D+T + PT+ +R T++ +
Sbjct: 216 --------KNSFGQLG--LGDTTDRPQ--PTQLKSLRFQRVTYIRCGMDHTAALTRDGGV 263
Query: 192 PASGDEFF----------TLSPCLVTLNPGVKITKVAAGGRHTL-ILSDMGQVWGWGYGG 240
G + + P V G +T++ G HTL + G+++ +G GG
Sbjct: 264 FTFGAGMYGQLGHCTSANEMLPRKVLELMGTTVTQICCGRCHTLAFVPSKGRIYAFGLGG 323
Query: 241 EGQLGLGSRIKMVPTPHLI--PCLEHAASGKD-RPLLVRQGSVNSSGKAGRSYVKEIACG 297
GQLG S V +P L+ P S KD + L S+ ++ R V+ I CG
Sbjct: 324 SGQLGTKSTAN-VNSPQLVIGPWETSNNSIKDVKDLATETAEALSAIQSKRVVVRNIFCG 382
Query: 298 GRHS 301
G S
Sbjct: 383 GDQS 386
>gi|302806118|ref|XP_002984809.1| hypothetical protein SELMODRAFT_234638 [Selaginella moellendorffii]
gi|300147395|gb|EFJ14059.1| hypothetical protein SELMODRAFT_234638 [Selaginella moellendorffii]
Length = 391
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 115/309 (37%), Gaps = 75/309 (24%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA E G+L TWG + K TP +V+AA G HC++V E
Sbjct: 50 SLAICEDGRLFTWGWNQRGTLGHPPETKTESTPSQVKALANVKIVQAAIGGWHCLAVDEE 109
Query: 123 GEVYTWG---WRECV--PSAKVTRDFGSAGSFQKDST--------------GKQSALPTE 163
G Y WG + +C K ++ G + +D T G S + TE
Sbjct: 110 GRTYAWGGNEYGQCAEEQQTKEQQNKGESKVLHRDITIPQRCAPRLCVAAGGTHSVVLTE 169
Query: 164 QA---------PPSDKRAGEEVVKRRKTSSA-----------------------REESEN 191
+ PP D + V+ + + E
Sbjct: 170 EGHVWTWGQPWPPGDIKQISVPVRVQGLENVTMIAVGAFHNLALVQHGEVWAWGNNEYGQ 229
Query: 192 PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
+GD SP V G+ + +AAGG H++ L+ G V+GWG G G+LG G
Sbjct: 230 LGTGDTQPRSSPVPVKGLTGLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGRLGFGDD-- 287
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
+ ++P H +G+ V +++CGG HS T +G +
Sbjct: 288 --KSSKMLPQKVHLLAGEP--------------------VVQVSCGGTHSVAATISGRMF 325
Query: 312 TFGWGLYGQ 320
+FG G +G+
Sbjct: 326 SFGRGDHGR 334
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 107/269 (39%), Gaps = 43/269 (15%)
Query: 45 RLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA 104
RLC V GG ++ +E G + TWG G + P +
Sbjct: 154 RLC-------VAAGGT-HSVVLTEEGHVWTWGQP-------WPPGDIKQISVPVRVQGLE 198
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ 164
+V A G H +++ + GEV+ WG ++G G+ D+ + S +P +
Sbjct: 199 NVTMIAVGAFHNLALVQHGEVWAWG----------NNEYGQLGT--GDTQPRSSPVPVKG 246
Query: 165 AP---PSDKRAGEEVVKRRKTSSA-----REESENPASGDEFFT-LSPCLVTLNPGVKIT 215
D AG A R E GD+ + + P V L G +
Sbjct: 247 LTGLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGRLGFGDDKSSKMLPQKVHLLAGEPVV 306
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
+V+ GG H++ + G+++ +G G G+LG G + P +P H S R +V
Sbjct: 307 QVSCGGTHSVAATISGRMFSFGRGDHGRLGYGGAV-TTGHPVEVPVSLHHYS---RHNIV 362
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
+ N S R VK +ACGGRH+ V
Sbjct: 363 SEDEANGS---TRWVVKLVACGGRHALAV 388
>gi|412992371|emb|CCO20084.1| predicted protein [Bathycoccus prasinos]
Length = 851
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 114/275 (41%), Gaps = 65/275 (23%)
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
+ S +D + ++ S + + PT + V+ +AG +HC +T+ G +YTWG
Sbjct: 356 FNSFNDNDEEFVQSDDNNTSWYRTLEPT--TFVQVSAGGSHCAGLTKNGTLYTWG----- 408
Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR-RKTSSAREESENPA 193
S+G TG P E A P + E + R K + +
Sbjct: 409 --------LASSGE-----TGHHHT-PIEVAIPRKVFSMAENLHRVTKVACGSNHTLAVT 454
Query: 194 SGDEFFT-------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+ F+ L+ C G+ +TKVAAGG+H++ ++D G+VW
Sbjct: 455 VDGQLFSCGRGRHGQLGLGYFHDGGPLTRCDAL--RGMHVTKVAAGGQHSVCITDDGRVW 512
Query: 235 GWGYGGEGQLGLGS-RIKM-------VPTPHLIPCL-EHAASGKDRPLLVRQGSVNSSGK 285
WG +GQLGLG R VP P L+ L E S D LL
Sbjct: 513 SWGDCTKGQLGLGDLRFATSAGWHTGVPWPCLVESLCEENLSSFD--LL----------- 559
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G+ V +++CG H+ VT +G L G G YGQ
Sbjct: 560 DGKDSVVQVSCGKMHTMFVTQSGKLFACGNGSYGQ 594
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 118/327 (36%), Gaps = 60/327 (18%)
Query: 18 KETVVYMWGYLPG--TSPEKSPILSPIPARLCG-GDSWKDVCGGGCG--FALATSESGKL 72
K +Y WG T +PI IP ++ ++ V CG LA + G+L
Sbjct: 400 KNGTLYTWGLASSGETGHHHTPIEVAIPRKVFSMAENLHRVTKVACGSNHTLAVTVDGQL 459
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ G GQ L G V K AAG H V +T+ G V W W +
Sbjct: 460 FSCGRGR-HGQLGLGYFHDGGPLTRCDALRGMHVTKVAAGGQHSVCITDDGRV--WSWGD 516
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP 192
C D A S G + +P P + EE N
Sbjct: 517 CTKGQLGLGDLRFA-----TSAGWHTGVP---WPCLVESLCEE---------------NL 553
Query: 193 ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL-GLGSRIK 251
+S D L+ + +V+ G HT+ ++ G+++ G G GQ+ GL +K
Sbjct: 554 SSFD----------LLDGKDSVVQVSCGKMHTMFVTQSGKLFACGNGSYGQIAGLAPTLK 603
Query: 252 MVP------------TPHLIPCLEHAASGKDRPLLVRQGS---VNSSGKAGRSY---VKE 293
TP I H L+ R + VN++ + + V +
Sbjct: 604 EQKSRNGTVGGYNQYTPKQIQIKHHVRKQDGTTLMHRVRACPCVNANQPSNGNVICRVAQ 663
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ CGG HS V+T GA+ G YGQ
Sbjct: 664 VTCGGNHSLVLTGCGAVFATGTNSYGQ 690
>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
jacchus]
Length = 1049
Score = 69.3 bits (168), Expect = 3e-09, Method: Composition-based stats.
Identities = 77/298 (25%), Positives = 113/298 (37%), Gaps = 88/298 (29%)
Query: 53 KDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K V GCG + + G + T G +D GQ L K + PE ++V +
Sbjct: 34 KKVQDVGCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVS 90
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G AH +++ + G+VY WG DS G+ L +E+
Sbjct: 91 CGEAHTLALNDKGQVYAWGL---------------------DSDGQLGLLGSEEC----- 124
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
+ R S + ++I +VA G H+L LS
Sbjct: 125 -----IRVPRNIKSLSD------------------------IQIVQVACGYYHSLALSKA 155
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV---- 280
+V+ WG GQLGLG+ K +P L IP ++ AA G +L G++
Sbjct: 156 SEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG 215
Query: 281 -NSSGKAGRS-----YVKE------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
N G+ G + YV I CG H+A +T G + TFG G YGQ
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Callithrix jacchus]
Length = 1057
Score = 69.3 bits (168), Expect = 3e-09, Method: Composition-based stats.
Identities = 78/298 (26%), Positives = 114/298 (38%), Gaps = 88/298 (29%)
Query: 53 KDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K V GCG + + G + T G +D GQ L K + PE ++V +
Sbjct: 34 KKVQDVGCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVS 90
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G AH +++ + G+VY WG DS G+ L +E+
Sbjct: 91 CGEAHTLALNDKGQVYAWGL---------------------DSDGQLGLLGSEECI---- 125
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
V + K+ S ++I +VA G H+L LS
Sbjct: 126 ----RVPRNIKSLS--------------------------DIQIVQVACGYYHSLALSKA 155
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV---- 280
+V+ WG GQLGLG+ K +P L IP ++ AA G +L G++
Sbjct: 156 SEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG 215
Query: 281 -NSSGKAGRS-----YVKE------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
N G+ G + YV I CG H+A +T G + TFG G YGQ
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
>gi|46249868|gb|AAH68834.1| LOC398469 protein [Xenopus laevis]
Length = 530
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 108/257 (42%), Gaps = 36/257 (14%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + + V+++G GT +S I+ LCG D+ G L
Sbjct: 32 NEAIYTTQNNEVFVFGMNISSCLGTGDNQSTIMPRRLDVLCG-KKIVDLSYGSGPHILLC 90
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
+E G++ +WG G S L +G + P + E V++ A G H +++T G
Sbjct: 91 NEDGEVYSWGH---NGYSQLGNGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALTSDG 147
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
EV++WG+ C G GS +T QS +P + A + + + +S
Sbjct: 148 EVFSWGYNNC----------GQVGS---GTTANQS-VPRKVASSLQSKVVVSISAGQTSS 193
Query: 184 SAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
A ++ + G+ L PC + + I +V G HTL LSD G
Sbjct: 194 MALTDNGHVYGWGYNGTGQLGLGNTGNQLMPCRLVFAQPICIIQVVLGYAHTLALSDQGV 253
Query: 233 VWGWGYGGEGQLGLGSR 249
++ WG GQLG+G++
Sbjct: 254 LYAWGANSHGQLGIGNK 270
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 25/128 (19%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T+ P + + G KI ++ G G H L+ ++ G+V+ WG+ G QLG G+ I+
Sbjct: 56 TGDNQSTIMPRRLDVLCGKKIVDLSYGSGPHILLCNEDGEVYSWGHNGYSQLGNGNTIQ- 114
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T + C+E LL ++ V ++ACG HS +T G + +
Sbjct: 115 -GTTPVQVCME---------LLSKK-------------VIQVACGSHHSMALTSDGEVFS 151
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 152 WGYNNCGQ 159
>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Monodelphis domestica]
Length = 1049
Score = 69.3 bits (168), Expect = 3e-09, Method: Composition-based stats.
Identities = 77/298 (25%), Positives = 113/298 (37%), Gaps = 88/298 (29%)
Query: 53 KDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K V GCG + + G + T G +D GQ L K + PE ++V +
Sbjct: 34 KKVQDVGCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVS 90
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G AH +++ + G+VY WG D+ G Q LP
Sbjct: 91 CGEAHTLALNDKGQVYAWGL---------------------DTDG-QLGLP--------- 119
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
EE +K + + + ++I ++A G H+L LS
Sbjct: 120 -GTEEYIKVPRNIKSLTD-----------------------IQIVQIACGYYHSLALSKG 155
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV---- 280
+V+ WG GQLGLG +K P L IP ++ AA G +L G++
Sbjct: 156 SEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG 215
Query: 281 -NSSGKAG----------------RSY-VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
N G+ G RS + I CG H+A +T G + TFG G YGQ
Sbjct: 216 RNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 67/272 (24%), Positives = 109/272 (40%), Gaps = 33/272 (12%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLT-SGKHGETPEPFPLPTEASVVKA 109
+++ CG A LA ++ G++ WG D +GQ L + ++ + P T+ +V+
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWG-LDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQI 142
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G+ H +++++ EV++WG + ++ F +P Q
Sbjct: 143 ACGYYHSLALSKGSEVFSWGQNK---HGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGG 199
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
+ + R + DE P L+ KI + G HT L+
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTK 259
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
G V+ +G GG GQLG S T H I R + GS+
Sbjct: 260 EGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI--------- 295
Query: 290 YVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V +G + +FG G GQ
Sbjct: 296 -VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Monodelphis domestica]
Length = 1057
Score = 69.3 bits (168), Expect = 3e-09, Method: Composition-based stats.
Identities = 77/298 (25%), Positives = 113/298 (37%), Gaps = 88/298 (29%)
Query: 53 KDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K V GCG + + G + T G +D GQ L K + PE ++V +
Sbjct: 34 KKVQDVGCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVS 90
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G AH +++ + G+VY WG D+ G Q LP
Sbjct: 91 CGEAHTLALNDKGQVYAWGL---------------------DTDG-QLGLP--------- 119
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
EE +K + + + ++I ++A G H+L LS
Sbjct: 120 -GTEEYIKVPRNIKSLTD-----------------------IQIVQIACGYYHSLALSKG 155
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV---- 280
+V+ WG GQLGLG +K P L IP ++ AA G +L G++
Sbjct: 156 SEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG 215
Query: 281 -NSSGKAG----------------RSY-VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
N G+ G RS + I CG H+A +T G + TFG G YGQ
Sbjct: 216 RNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 67/272 (24%), Positives = 109/272 (40%), Gaps = 33/272 (12%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLT-SGKHGETPEPFPLPTEASVVKA 109
+++ CG A LA ++ G++ WG D +GQ L + ++ + P T+ +V+
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWG-LDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQI 142
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G+ H +++++ EV++WG + ++ F +P Q
Sbjct: 143 ACGYYHSLALSKGSEVFSWGQNK---HGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGG 199
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
+ + R + DE P L+ KI + G HT L+
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTK 259
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
G V+ +G GG GQLG S T H I R + GS+
Sbjct: 260 EGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI--------- 295
Query: 290 YVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V +G + +FG G GQ
Sbjct: 296 -VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
vinifera]
gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 103/269 (38%), Gaps = 43/269 (15%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G ++A + +WG +D GQ + +P VV G H +
Sbjct: 24 GASHSVALLSGNVVCSWGRGED-GQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTA 82
Query: 119 VTEA-GEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPSDKR 171
+E+ +VY+WGW DFG G F L +Q D
Sbjct: 83 YSESFTQVYSWGWG----------DFGRLGHGNSSDLFTPQPIKALHGLRIKQIACGDSH 132
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ S R ++ G +L P + GV + VAAG HT +++ G
Sbjct: 133 CLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDG 192
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
+++GWG+G G LGLG R + P + +E G V
Sbjct: 193 ELYGWGWGRYGNLGLGDRNDRL-VPEKVSTVE-----------------------GVKMV 228
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
K +ACG RH+ V+ +G L T+GW YGQ
Sbjct: 229 K-VACGWRHTISVSSSGGLYTYGWSKYGQ 256
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 96/238 (40%), Gaps = 51/238 (21%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKD 152
TP+P + + A G +HC++VT GEV +WG + G G +D
Sbjct: 111 TPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWGRNQN----------GQLGLGTTED 160
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLS 202
S Q + AG E T++ E+ E N GD L
Sbjct: 161 SLVPQKIQAFQGVSVKMVAAGAE-----HTAAVTEDGELYGWGWGRYGNLGLGDRNDRLV 215
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P V+ GVK+ KVA G RHT+ +S G ++ +G+ GQLG G + TPH + L
Sbjct: 216 PEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHL-TPHKLEAL 274
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ + + EI+ G RH+ +T G L +GW +GQ
Sbjct: 275 Q------------------------ENLISEISGGWRHTMALTSDGKLYGWGWNKFGQ 308
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 80/216 (37%), Gaps = 18/216 (8%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G A +E G+L WG G L PE +VK A GW H +S
Sbjct: 181 GAEHTAAVTEDGELYGWGWGR-YGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTIS 239
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
V+ +G +YT+GW + +G G + L Q + +G
Sbjct: 240 VSSSGGLYTYGWSK----------YGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHT 289
Query: 179 RRKTSSAR------EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
TS + + GD SP V K+ ++ G RHTL +++
Sbjct: 290 MALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTERQN 349
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
V+ WG G GQLG G I P +I L SG
Sbjct: 350 VFSWGRGTNGQLGHGESIDR-NIPKMIEVLSADGSG 384
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + +P P E VV + GW H +
Sbjct: 284 GGWRHTMALTSDGKLYGWG-WNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTL 342
Query: 118 SVTEAGEVYTWG 129
+VTE V++WG
Sbjct: 343 AVTERQNVFSWG 354
>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Nomascus leucogenys]
Length = 1057
Score = 69.3 bits (168), Expect = 3e-09, Method: Composition-based stats.
Identities = 76/292 (26%), Positives = 112/292 (38%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG DS G+ L +E+ V
Sbjct: 97 LALNDKGQVYAWGL---------------------DSDGQLGLLGSEECI--------RV 127
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ K+ S ++I +VA G H+L LS +V+ W
Sbjct: 128 PRNIKSLS--------------------------DIQIVQVACGYYHSLALSKASEVFCW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG+ K +P L IP ++ AA G +L G++ N G+
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 286 AGRS-----YVKE------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + YV I CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 70/278 (25%), Positives = 108/278 (38%), Gaps = 45/278 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS--AGSFQKDSTGKQ-----SALPTE 163
G+ H +++++A EV+ WG + +G G+ K T Q +P
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK----------YGQLGLGTDCKKQTSPQLLKSLVGIPFM 193
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
Q + + R + DE P L+ KI + G H
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
T L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI--- 295
Query: 284 GKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V +G + +FG G GQ
Sbjct: 296 -------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Papio anubis]
Length = 1049
Score = 69.3 bits (168), Expect = 3e-09, Method: Composition-based stats.
Identities = 76/292 (26%), Positives = 112/292 (38%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG DS G+ L +E+ V
Sbjct: 97 LALNDKGQVYAWGL---------------------DSDGQLGLLGSEECI--------RV 127
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ K+ S ++I +VA G H+L LS +V+ W
Sbjct: 128 PRNIKSLS--------------------------DIQIIQVACGYYHSLALSKASEVFCW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG+ K +P L IP ++ AA G +L G++ N G+
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 286 AGRS-----YVKE------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + YV I CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats.
Identities = 69/278 (24%), Positives = 108/278 (38%), Gaps = 45/278 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +++ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS--AGSFQKDSTGKQ-----SALPTE 163
G+ H +++++A EV+ WG + +G G+ K T Q +P
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK----------YGQLGLGTDCKKQTSPQLIKSLLGIPFM 193
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
Q + + R + DE P L+ KI + G H
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
T L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI--- 295
Query: 284 GKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V +G + +FG G GQ
Sbjct: 296 -------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
mulatta]
Length = 1049
Score = 69.3 bits (168), Expect = 3e-09, Method: Composition-based stats.
Identities = 76/292 (26%), Positives = 112/292 (38%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG DS G+ L +E+ V
Sbjct: 97 LALNDKGQVYAWGL---------------------DSDGQLGLLGSEECI--------RV 127
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ K+ S ++I +VA G H+L LS +V+ W
Sbjct: 128 PRNIKSLS--------------------------DIQIIQVACGYYHSLALSKASEVFCW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG+ K +P L IP ++ AA G +L G++ N G+
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 286 AGRS-----YVKE------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + YV I CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats.
Identities = 69/278 (24%), Positives = 108/278 (38%), Gaps = 45/278 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +++ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS--AGSFQKDSTGKQ-----SALPTE 163
G+ H +++++A EV+ WG + +G G+ K T Q +P
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK----------YGQLGLGTDCKKQTSPQLIKSLLGIPFM 193
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
Q + + R + DE P L+ KI + G H
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
T L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI--- 295
Query: 284 GKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V +G + +FG G GQ
Sbjct: 296 -------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Papio anubis]
Length = 1057
Score = 69.3 bits (168), Expect = 3e-09, Method: Composition-based stats.
Identities = 76/292 (26%), Positives = 112/292 (38%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG DS G+ L +E+ V
Sbjct: 97 LALNDKGQVYAWGL---------------------DSDGQLGLLGSEECI--------RV 127
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ K+ S ++I +VA G H+L LS +V+ W
Sbjct: 128 PRNIKSLS--------------------------DIQIIQVACGYYHSLALSKASEVFCW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG+ K +P L IP ++ AA G +L G++ N G+
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 286 AGRS-----YVKE------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + YV I CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats.
Identities = 69/278 (24%), Positives = 108/278 (38%), Gaps = 45/278 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +++ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS--AGSFQKDSTGKQ-----SALPTE 163
G+ H +++++A EV+ WG + +G G+ K T Q +P
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK----------YGQLGLGTDCKKQTSPQLIKSLLGIPFM 193
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
Q + + R + DE P L+ KI + G H
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
T L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI--- 295
Query: 284 GKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V +G + +FG G GQ
Sbjct: 296 -------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
Length = 1057
Score = 69.3 bits (168), Expect = 3e-09, Method: Composition-based stats.
Identities = 76/292 (26%), Positives = 112/292 (38%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG DS G+ L +E+ V
Sbjct: 97 LALNDKGQVYAWGL---------------------DSDGQLGLLGSEECI--------RV 127
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ K+ S ++I +VA G H+L LS +V+ W
Sbjct: 128 PRNIKSLS--------------------------DIQIIQVACGYYHSLALSKASEVFCW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG+ K +P L IP ++ AA G +L G++ N G+
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 286 AGRS-----YVKE------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + YV I CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats.
Identities = 69/278 (24%), Positives = 108/278 (38%), Gaps = 45/278 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +++ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS--AGSFQKDSTGKQ-----SALPTE 163
G+ H +++++A EV+ WG + +G G+ K T Q +P
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK----------YGQLGLGTDCKKQTSPQLIKSLLGIPFM 193
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
Q + + R + DE P L+ KI + G H
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
T L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI--- 295
Query: 284 GKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V +G + +FG G GQ
Sbjct: 296 -------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Saimiri boliviensis boliviensis]
Length = 1057
Score = 69.3 bits (168), Expect = 3e-09, Method: Composition-based stats.
Identities = 76/292 (26%), Positives = 112/292 (38%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG DS G+ L +E+ V
Sbjct: 97 LALNDKGQVYAWGL---------------------DSDGQLGLLGSEECI--------RV 127
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ K+ S ++I +VA G H+L LS +V+ W
Sbjct: 128 PRNIKSLS--------------------------DIQIVQVACGYYHSLALSKASEVFCW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG+ K +P L IP ++ AA G +L G++ N G+
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 286 AGRS-----YVKE------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + YV I CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 70/278 (25%), Positives = 108/278 (38%), Gaps = 45/278 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS--AGSFQKDSTGKQ-----SALPTE 163
G+ H +++++A EV+ WG + +G G+ K T Q +P
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK----------YGQLGLGTDCKKQTSPQLIKSLLGIPFM 193
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
Q + + R + DE P L+ KI + G H
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
T L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI--- 295
Query: 284 GKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V +G + +FG G GQ
Sbjct: 296 -------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1049
Score = 69.3 bits (168), Expect = 3e-09, Method: Composition-based stats.
Identities = 76/292 (26%), Positives = 112/292 (38%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG DS G+ L +E+ V
Sbjct: 97 LALNDKGQVYAWGL---------------------DSDGQLGLLGSEECI--------RV 127
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ K+ S ++I +VA G H+L LS +V+ W
Sbjct: 128 PRNIKSLS--------------------------DIQIVQVACGYYHSLALSKASEVFCW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG+ K +P L IP ++ AA G +L G++ N G+
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 286 AGRS-----YVKE------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + YV I CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 70/278 (25%), Positives = 108/278 (38%), Gaps = 45/278 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS--AGSFQKDSTGKQ-----SALPTE 163
G+ H +++++A EV+ WG + +G G+ K T Q +P
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK----------YGQLGLGTDCKKQTSPQLIKSLLGIPFM 193
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
Q + + R + DE P L+ KI + G H
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
T L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI--- 295
Query: 284 GKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V +G + +FG G GQ
Sbjct: 296 -------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
Length = 1054
Score = 69.3 bits (168), Expect = 3e-09, Method: Composition-based stats.
Identities = 76/292 (26%), Positives = 112/292 (38%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG DS G+ L +E+ V
Sbjct: 97 LALNDKGQVYAWGL---------------------DSDGQLGLLGSEECI--------RV 127
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ K+ S ++I +VA G H+L LS +V+ W
Sbjct: 128 PRNIKSLS--------------------------DIQIIQVACGYYHSLALSKASEVFCW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG+ K +P L IP ++ AA G +L G++ N G+
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 286 AGRS-----YVKE------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + YV I CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats.
Identities = 69/278 (24%), Positives = 108/278 (38%), Gaps = 45/278 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +++ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS--AGSFQKDSTGKQ-----SALPTE 163
G+ H +++++A EV+ WG + +G G+ K T Q +P
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK----------YGQLGLGTDCKKQTSPQLIKSLLGIPFM 193
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
Q + + R + DE P L+ KI + G H
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
T L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI--- 295
Query: 284 GKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V +G + +FG G GQ
Sbjct: 296 -------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Nomascus leucogenys]
Length = 1049
Score = 69.3 bits (168), Expect = 3e-09, Method: Composition-based stats.
Identities = 76/292 (26%), Positives = 112/292 (38%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG DS G+ L +E+ V
Sbjct: 97 LALNDKGQVYAWGL---------------------DSDGQLGLLGSEECI--------RV 127
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ K+ S ++I +VA G H+L LS +V+ W
Sbjct: 128 PRNIKSLS--------------------------DIQIVQVACGYYHSLALSKASEVFCW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG+ K +P L IP ++ AA G +L G++ N G+
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 286 AGRS-----YVKE------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + YV I CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 70/278 (25%), Positives = 108/278 (38%), Gaps = 45/278 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS--AGSFQKDSTGKQ-----SALPTE 163
G+ H +++++A EV+ WG + +G G+ K T Q +P
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK----------YGQLGLGTDCKKQTSPQLLKSLVGIPFM 193
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
Q + + R + DE P L+ KI + G H
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
T L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI--- 295
Query: 284 GKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V +G + +FG G GQ
Sbjct: 296 -------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
caballus]
Length = 1050
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 133/333 (39%), Gaps = 81/333 (24%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
WGY P S L I A ++CG S + V CG ++ E G++ T G +
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 62
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
+GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 63 KGQ--LGHEREGNKPEQIGALADQHIVHVACGESHNLALSDRGQLFSWG----------- 109
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQA---PPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
AGS G+ + TE A P ++ ++ + + S S A+ +
Sbjct: 110 -----AGS-----DGQLGLMTTEDAVAVPRVIQKLNQQTI--LQVSCGNWHSLALAADGQ 157
Query: 198 FFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
FFT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
GQLGL E S LL Q V I+CG
Sbjct: 218 NAGQLGLSDE-------------EDRESPCHVKLLRTQKVV------------YISCGEE 252
Query: 300 HSAVVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
H+AV+T +G + TFG G GQ L D +N
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQ-----LGHDSMN 280
>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 437
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 111/275 (40%), Gaps = 56/275 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVKAAAG 112
G ++A + +WG +D GQ HG+T + PT+ S ++ G
Sbjct: 22 GASHSVALLSGNVVCSWGRGED-GQL-----GHGDTDDRL-FPTKLSALDGQDIICVTCG 74
Query: 113 WAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDS------TGKQSALPTEQA 165
H ++ +E+G +VY+WGW DFG G L +Q
Sbjct: 75 ADHTMARSESGRDVYSWGWG----------DFGRLGHGDHSDLLIPHPIKALQGLMIQQI 124
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
D + + S R ++ G +L P + + + I VAAG H++
Sbjct: 125 ACGDSHCLAVTMDSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSV 184
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
++ G ++GWG+G G LGLG R DR LL + +V+
Sbjct: 185 AITKDGNLYGWGWGRYGNLGLGDR-------------------NDR-LLPEKVTVDGDKM 224
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
A +ACG RH+ V+ +G L T GWG YGQ
Sbjct: 225 A------MVACGWRHTICVSSSGGLYTNGWGKYGQ 253
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 120/288 (41%), Gaps = 47/288 (16%)
Query: 42 IPARLCGGDSWKDVC-GGGCGFALATSESGK-LITWGSADDEGQSYLTSGKHGETPEPFP 99
P +L D +C G +A SESG+ + +WG D L G H + P P
Sbjct: 56 FPTKLSALDGQDIICVTCGADHTMARSESGRDVYSWGWGD---FGRLGHGDHSDLLIPHP 112
Query: 100 LPTEASVV--KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ ++ + A G +HC++VT +V +WG + G+A +DS Q
Sbjct: 113 IKALQGLMIQQIACGDSHCLAVTMDSQVLSWGRNQ-----NGELGLGTA----EDSLLPQ 163
Query: 158 SALPTEQAPPSDKRAG-EEVVKRRKTSSARE----ESENPASGDEFFTLSPCLVTLNPGV 212
E+ P AG E V K + N GD L P VT++ G
Sbjct: 164 KIQIFEEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRNDRLLPEKVTVD-GD 222
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
K+ VA G RHT+ +S G ++ G+G GQLG G HL+P A S K
Sbjct: 223 KMAMVACGWRHTICVSSSGGLYTNGWGKYGQLGHGDF-----EDHLVPRKVQALSDK--- 274
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
++ +++ G RHS +T +G LL +GW +GQ
Sbjct: 275 -----------------FISQVSGGWRHSMALTSSGQLLGWGWNKFGQ 305
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 107/285 (37%), Gaps = 53/285 (18%)
Query: 22 VYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSA 78
VY WG + + S +L P P + G + + G LA + ++++WG
Sbjct: 88 VYSWGWGDFGRLGHGDHSDLLIPHPIKALQGLMIQQIACGDS-HCLAVTMDSQVLSWGR- 145
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW-------- 130
+ G+ L + + P+ + E + AAG H V++T+ G +Y WGW
Sbjct: 146 NQNGELGLGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGL 205
Query: 131 ---RECVPSAKVTRD----------------FGSAGSFQKDSTGKQSAL----------P 161
+ + KVT D S+G + GK L P
Sbjct: 206 GDRNDRLLPEKVTVDGDKMAMVACGWRHTICVSSSGGLYTNGWGKYGQLGHGDFEDHLVP 265
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPG 211
+ SDK + R + + + G+ F SP V
Sbjct: 266 RKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVGNNFDCCSPMQVNFPHD 325
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPT 255
K+ ++ G RHT+ +++ V+ WG G GQLG G I + VPT
Sbjct: 326 QKVQMISCGWRHTIAVTERENVYSWGRGANGQLGNGETIDRNVPT 370
>gi|255551398|ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223544118|gb|EEF45643.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 393
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 117/310 (37%), Gaps = 77/310 (24%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA + GKL TWG + K P ++V+AA G HC++V +
Sbjct: 50 SLAICDDGKLFTWGWNQRGTLGHPAETKTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQ 109
Query: 123 GEVYTWG---WRECVPSAKVTRDFGSAGSFQKD-----------------STGKQSALPT 162
G Y WG + +C + D G + ++D + G S + T
Sbjct: 110 GRAYAWGGNEYGQCGEEPERKDDTGK--TLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLT 167
Query: 163 EQA---------PPSD--------KRAGEEVVKRRKTSS---------------AREESE 190
+ PP D + G E VK + E
Sbjct: 168 REGHVWTWGQPWPPGDIKQISVPVRVQGLEKVKLIAVGAFHNLALQEDGTLWAWGNNEYG 227
Query: 191 NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
+GD P V G+ + +AAGG H+ L+D G+V+GWG G G+LG G
Sbjct: 228 QLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDND 287
Query: 251 KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGAL 310
K + ++P + +G+D + +++CGG HS +T G +
Sbjct: 288 K---SSKMVPQKVNLLAGED--------------------IVQLSCGGTHSVALTQDGRM 324
Query: 311 LTFGWGLYGQ 320
+FG G +G+
Sbjct: 325 FSFGRGDHGR 334
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 12/143 (8%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
+ P PIP + G + D+ GG + A ++ G++ WG + + + K +
Sbjct: 233 DTQPRSQPIPVQGLSGLTLVDIAAGGW-HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSK 291
Query: 94 -TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
P+ L +V+ + G H V++T+ G ++++G D G G +K
Sbjct: 292 MVPQKVNLLAGEDIVQLSCGGTHSVALTQDGRMFSFG----------RGDHGRLGYGKKV 341
Query: 153 STGKQSALPTEQAPPSDKRAGEE 175
+TG+ +PT+ PP EE
Sbjct: 342 TTGQPVEVPTDIPPPKSLSGTEE 364
Score = 41.2 bits (95), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 17/114 (14%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM--- 252
D+ + P V L G I +++ GG H++ L+ G+++ +G G G+LG G ++
Sbjct: 287 DKSSKMVPQKVNLLAGEDIVQLSCGGTHSVALTQDGRMFSFGRGDHGRLGYGKKVTTGQP 346
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
V P IP + + SG + G K +ACGGRH+ + +
Sbjct: 347 VEVPTDIPPPK-SLSGTEE-------------AEGHWIAKLVACGGRHTLAIVE 386
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 59/147 (40%), Gaps = 36/147 (24%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG---------LGSRIKMVP 254
C+V K+ V AG R++L + D G+++ WG+ G LG + S++K +
Sbjct: 30 CVVNALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQRGTLGHPAETKTENIPSQVKALN 89
Query: 255 TPHLI---------------------------PCLEHAASGKDRPLLVRQGSVNSSGKAG 287
+++ C E D +R+ V A
Sbjct: 90 NVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGKTLRRDIVIPQRCAP 149
Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFG 314
+ V+++A GG HS V+T G + T+G
Sbjct: 150 KLVVRQVAAGGTHSVVLTREGHVWTWG 176
>gi|440800160|gb|ELR21203.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 417
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 110/272 (40%), Gaps = 76/272 (27%)
Query: 18 KETVVYMWGY-------LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESG 70
K+ V+ WGY GT E L P + G+ V G L G
Sbjct: 209 KDGRVWTWGYGIDGQLGHNGTEDE----LKPKELTVIRGEGISRVTCGTDFTGLLNETEG 264
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+L T+G+ + GQ L G+ G EP +P + +V + AAG AH +++T+ G+ ++WGW
Sbjct: 265 RLFTFGNGE-AGQ--LGHGERGLCLEPSVVPLD-NVKEVAAGGAHMLALTKDGQAWSWGW 320
Query: 131 RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE 190
E D R G
Sbjct: 321 GE------------------------------------DGRLGH---------------- 328
Query: 191 NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
+ ++F P + TL P V + V+AGG H+L L++ GQV+GWG+ G+LGLG+
Sbjct: 329 --GATEDFLKPEP-IPTLGPAVGVVSVSAGGGHSLALTESGQVYGWGFNASGRLGLGNE- 384
Query: 251 KMVPTPHLIPCLE-----HAASGKDRPLLVRQ 277
V TP LI L A G D L + Q
Sbjct: 385 SSVMTPTLIKALADKRVLRAICGLDHSLFITQ 416
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 41/258 (15%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
+A S++G++ WG+++ GQ+ L + + P + S+V + G H +V++ G
Sbjct: 153 IALSKNGEVYIWGNSE-FGQTGLGNKEAQHLPIRMEFFRDKSIVDVSCGLDHSAAVSKDG 211
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP----SDKRAGEEVVKR 179
V+TWG+ + G G+ + + + + E +D +
Sbjct: 212 RVWTWGY-------GIDGQLGHNGTEDELKPKELTVIRGEGISRVTCGTDFTGLLNETEG 264
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
R + E+ G+ L P +V L+ + +VAAGG H L L+ GQ W WG+G
Sbjct: 265 RLFTFGNGEAGQLGHGERGLCLEPSVVPLD---NVKEVAAGGAHMLALTKDGQAWSWGWG 321
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
+G+LG G+ + P IP L A V ++ GG
Sbjct: 322 EDGRLGHGATEDFL-KPEPIPTLGPAVG-----------------------VVSVSAGGG 357
Query: 300 HSAVVTDAGALLTFGWGL 317
HS +T++G + +GWG
Sbjct: 358 HSLALTESGQV--YGWGF 373
>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1049
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 115/303 (37%), Gaps = 55/303 (18%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
G E +P+ P + G K+V GG L + G + T GS + GQ L
Sbjct: 13 GIGVEGNPVFEPRICHVFSGRGLKEVACGG-QHTLFLLQDGSVYTCGS-NSCGQ--LGHD 68
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
K G +PE + + G AH V+V E G+V+ WG G G
Sbjct: 69 KAGNSPELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGA-------------GDGGQL 115
Query: 150 QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-----NPASGD------EF 198
++ +P D + V + + + + +SG E
Sbjct: 116 GLETAETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGKGET 175
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
LSP V G+ + ++ AGG H LS G V+GWG GQLGL +
Sbjct: 176 SKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDK--------- 226
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGL 317
+DR +V K RS V I+CG H+A +T +G L TFG G
Sbjct: 227 ----------QDR-------AVPCHIKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGS 269
Query: 318 YGQ 320
GQ
Sbjct: 270 RGQ 272
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 108/286 (37%), Gaps = 47/286 (16%)
Query: 46 LCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE 103
L G + + CG A +A +E G++ WG+ D T+ P +
Sbjct: 76 LVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGLETAETAVRIPRLLKKLCD 135
Query: 104 ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
S+ + G HC++++ G+++TWG G G K T K S P +
Sbjct: 136 HSISQVVCGNQHCIALSRDGQLFTWGQNSS----------GQLG-LGKGETSKLSPSPVK 184
Query: 164 Q---APPSDKRAGEEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVKIT 215
P + AG + S A + ++ D+ PC + ++
Sbjct: 185 SLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQRVV 244
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
++ G HT L+ G ++ +G G GQLG GS L+P R ++
Sbjct: 245 YISCGDEHTAALTKSGGLFTFGDGSRGQLGHGS-----SNNELLP----------RRVME 289
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQ 320
G + V +I CG H+ A V +G + FG +GQ
Sbjct: 290 LMG----------TEVSQITCGRHHTLAFVPSSGTVYAFGCNSHGQ 325
>gi|327288514|ref|XP_003228971.1| PREDICTED: RCC1 domain-containing protein 1-like [Anolis
carolinensis]
Length = 266
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 95/221 (42%), Gaps = 46/221 (20%)
Query: 35 KSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET 94
+ P P+PA LC + + V G L E+G L +WGS GQ L G +
Sbjct: 35 RPPFFHPLPASLC---ARRLVLG--HEHMLLLDEAGTLFSWGSGR-HGQ--LGHGDLEDR 86
Query: 95 PEPFPLPTEASVVK---AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
PEP + V AA GW H +V+EAG++Y WGW E
Sbjct: 87 PEPQAVEALQGVALKEVAAGGW-HSATVSEAGDLYLWGWNES------------------ 127
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA--REESENPASGDEFFTLS--PCLVT 207
Q LP++ A S A R T A R + + P G +F ++ P L+
Sbjct: 128 ----GQLGLPSKAASESQGAA-------RDTDGAGDRAQPQGP-PGADFISIQAFPALLH 175
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
L G + K G RHT ++ G+++ WG+G GQLG G
Sbjct: 176 LPRGAEALKAGCGSRHTAAVTRTGELYTWGWGQYGQLGHGD 216
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 55/135 (40%), Gaps = 29/135 (21%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P V GV + +VAAGG H+ +S+ G ++ WG+ GQLGL S+
Sbjct: 89 PQAVEALQGVALKEVAAGGWHSATVSEAGDLYLWGWNESGQLGLPSKAAS---------- 138
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVK-----------------EIACGGRHSAVVT 305
+ G R G G ++ + CG RH+A VT
Sbjct: 139 --ESQGAARDTDGAGDRAQPQGPPGADFISIQAFPALLHLPRGAEALKAGCGSRHTAAVT 196
Query: 306 DAGALLTFGWGLYGQ 320
G L T+GWG YGQ
Sbjct: 197 RTGELYTWGWGQYGQ 211
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 25/118 (21%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L + ++ G H L+L + G ++ WG G GQLG G ++ P P + L
Sbjct: 37 PFFHPLPASLCARRLVLGHEHMLLLDEAGTLFSWGSGRHGQLGHGD-LEDRPEPQAVEAL 95
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ A +KE+A GG HSA V++AG L +GW GQ
Sbjct: 96 QGVA------------------------LKEVAAGGWHSATVSEAGDLYLWGWNESGQ 129
>gi|159037173|ref|YP_001536426.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157916008|gb|ABV97435.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 569
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 107/293 (36%), Gaps = 89/293 (30%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
PIP L G GG +LA + +G ++ WG + GQ + + TP L
Sbjct: 87 PIPVGLPKGTEVTAAAGGDA-HSLAVTSAGTVLAWGR-NAVGQLGDGTTINRSTPVDVRL 144
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
P +V AAG+ H +++T AG V+ WG +STG+
Sbjct: 145 PPGTTVTAVAAGFNHSLALTSAGTVFAWG---------------------DNSTGQL--- 180
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
G+ R T P V+ G IT VAAG
Sbjct: 181 ------------GDGTRTNRST--------------------PVAVSFPSGTVITAVAAG 208
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
G H+L L+ G V+ WG GQLG G+R + P++V
Sbjct: 209 GMHSLALTSAGTVFAWGDNSTGQLGDGTRTN-----------------RSTPVVV----- 246
Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQRMAKCLAGDGINM 333
G + V IA GG HS VT AG +G GQ GDG N+
Sbjct: 247 ---GLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQL------GDGSNI 290
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 89/223 (39%), Gaps = 17/223 (7%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT+ +S +P+ RL G + V G +LA + +G + WG + GQ +
Sbjct: 131 GTTINRS---TPVDVRLPPGTTVTAVAAG-FNHSLALTSAGTVFAWGD-NSTGQLGDGTR 185
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
+ TP P+ + AAG H +++T AG V+ WG T G G+
Sbjct: 186 TNRSTPVAVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGDNS-------TGQLGD-GTR 237
Query: 150 QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN----PASGDEFFTLSPCL 205
ST LP + G + +AR N G +
Sbjct: 238 TNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQLGDGSNINRDASVH 297
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
V L PG +T VA G H+L L+ +G V WG GQLG G+
Sbjct: 298 VRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDGT 340
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 92/260 (35%), Gaps = 22/260 (8%)
Query: 11 NEKMEECKETVVYMWG------YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFAL 64
N + V+ WG GT +S +P+ G V GG +L
Sbjct: 158 NHSLALTSAGTVFAWGDNSTGQLGDGTRTNRS---TPVAVSFPSGTVITAVAAGGM-HSL 213
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A + +G + WG + GQ + + TP LP V A G +H ++VT AG
Sbjct: 214 ALTSAGTVFAWGD-NSTGQLGDGTRTNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSAGN 272
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
WG G + +D++ P + +
Sbjct: 273 ARAWG-------NNFVGQLGDGSNINRDASVHVRLPPGTTVTAVAGGLTHSLALTSVGTV 325
Query: 185 AREESEN---PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
S N G +P V+L PGV IT VAAG L L+ G V WG
Sbjct: 326 LSWGSNNWGQLGDGTARDRNTPGSVSLPPGVTITAVAAGDLFGLALTSAGTVLAWGGNIV 385
Query: 242 GQLGLG-SRIKMVPTPHLIP 260
GQLG G + ++ P +P
Sbjct: 386 GQLGDGTTTVRRTPVAASLP 405
>gi|345798049|ref|XP_003434392.1| PREDICTED: RCC1 domain-containing protein 1 [Canis lupus
familiaris]
Length = 282
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 47/201 (23%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL E+G++ +WG G+HG+ EP P EA V +
Sbjct: 72 GAEHALLLDEAGQVFSWGQ-----------GRHGQLGHGSLEAEPEPRLLEALQGLPVAE 120
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRE----CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ 164
AAG H V V+E G++Y WGW E +PS + D T+
Sbjct: 121 VAAGGWHSVCVSETGDIYIWGWNESGQLALPSRSLAED-------------------TKT 161
Query: 165 APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
P E+ + R+T+ + + P + F P L+ L G + K + G RHT
Sbjct: 162 IPREASGLNEDGFEVRRTAKGEDGAPAPFIAIQPF---PALLDLPLGADVVKASCGSRHT 218
Query: 225 LILSDMGQVWGWGYGGEGQLG 245
+++ G+++ WG+G GQLG
Sbjct: 219 AVVTGTGELYTWGWGKYGQLG 239
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC- 261
P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L SR + IP
Sbjct: 107 PRLLEALQGLPVAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPSR-SLAEDTKTIPRE 165
Query: 262 ----------LEHAASGKD---RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAG 308
+ A G+D P + Q + V + +CG RH+AVVT G
Sbjct: 166 ASGLNEDGFEVRRTAKGEDGAPAPFIAIQPFPALLDLPLGADVVKASCGSRHTAVVTGTG 225
Query: 309 ALLTFGWGLYGQ 320
L T+GWG YGQ
Sbjct: 226 ELYTWGWGKYGQ 237
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 62/140 (44%), Gaps = 31/140 (22%)
Query: 187 EESENPASGDEFFTLSP-----CLVT-LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
E + P SG + +S LVT L P ++ ++ G H L+L + GQV+ WG G
Sbjct: 33 EPLQTPGSGADVRRVSASWSYTALVTPLAPELRARRLELGAEHALLLDEAGQVFSWGQGR 92
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
GQLG GS ++ P P L+ L+ V E+A GG H
Sbjct: 93 HGQLGHGS-LEAEPEPRLLEALQGLP------------------------VAEVAAGGWH 127
Query: 301 SAVVTDAGALLTFGWGLYGQ 320
S V++ G + +GW GQ
Sbjct: 128 SVCVSETGDIYIWGWNESGQ 147
>gi|156546048|ref|XP_001600404.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Nasonia
vitripennis]
Length = 533
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 102/247 (41%), Gaps = 17/247 (6%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + K+ VY G GT S + LCG K G LA
Sbjct: 34 NEALIVTKDGDVYALGSNTAGCLGTGDSHSTLHPKKVEALCG-KGIKTFAYGSGPHVLAL 92
Query: 67 SESGKLITWGSADDEGQSYLTSG--KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
+ G++ +WG G L +G G TP E V A G H V++TE GE
Sbjct: 93 TNKGEIYSWG---HNGYCELGNGSTNQGLTPTLCLNLNEKVVTAIACGSHHSVALTEDGE 149
Query: 125 VYTWGWREC-VPSAKVTRDFGSAGSFQKDSTGKQS-ALPTEQAPPSDKRAGEEVVKRRKT 182
VY+WG C S+ ++ + G+ TGK ++ Q EV
Sbjct: 150 VYSWGQNNCGQVSSGISSNQGAPRKVNSALTGKVVVSIACGQTSSMAVTDVGEVFGWGYN 209
Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
+ G+ LSPC VT G+ I KVA G HTL LSD G ++ WG G G
Sbjct: 210 GVGQ-----LGIGNYVNQLSPCKVTGLNGIVIEKVACGYAHTLALSDEGALYVWGGNGFG 264
Query: 243 QLGLGSR 249
QLGLG++
Sbjct: 265 QLGLGNK 271
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 28/120 (23%)
Query: 201 LSPCL-VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L+P L + LN V +T +A G H++ L++ G+V+ WG GQ+ G
Sbjct: 118 LTPTLCLNLNEKV-VTAIACGSHHSVALTEDGEVYSWGQNNCGQVSSG------------ 164
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
+S + P R+ + +GK V IACG S VTD G + FGWG G
Sbjct: 165 -----ISSNQGAP---RKVNSALTGKV----VVSIACGQTSSMAVTDVGEV--FGWGYNG 210
>gi|348686412|gb|EGZ26227.1| hypothetical protein PHYSODRAFT_486876 [Phytophthora sojae]
Length = 289
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 63/132 (47%), Gaps = 24/132 (18%)
Query: 189 SENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
++ S E P +V V+I +VAAGG H+L L G VW WG GQLG+ S
Sbjct: 108 AQAAVSAGEDVVRVPTVVEFPTPVQIVQVAAGGMHSLALDSSGGVWAWGCNEFGQLGINS 167
Query: 249 RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAG 308
++ +P + A S + R V++IA G HSA+V+ +G
Sbjct: 168 EVETQHSPRRV-----ALSAEIR-------------------VRDIAAGWAHSALVSTSG 203
Query: 309 ALLTFGWGLYGQ 320
+ TFGWGLY Q
Sbjct: 204 EVFTFGWGLYNQ 215
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 107/265 (40%), Gaps = 80/265 (30%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCV 117
G LA ++SG+++ WG + Q+ +++G+ P PT +V+ AAG H +
Sbjct: 86 GSNHVLALTDSGRVVAWGW-NASAQAAVSAGEDVVRVPTVVEFPTPVQIVQVAAGGMHSL 144
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++ +G V+ WG E FG G S + T+ +P
Sbjct: 145 ALDSSGGVWAWGCNE----------FGQ--------LGINSEVETQHSP----------- 175
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
RR V L+ +++ +AAG H+ ++S G+V+ +G
Sbjct: 176 -RR-------------------------VALSAEIRVRDIAAGWAHSALVSTSGEVFTFG 209
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
+G QLG GS V P + A G D S ++ACG
Sbjct: 210 WGLYNQLGHGSTQNEVE-----PVVVDALQGVD------------------SEAVQVACG 246
Query: 298 GRHSAVVTDAGALLTFGWGLYGQRM 322
H+A +T +G L T+GWG GQ +
Sbjct: 247 NWHTAALTASGDLYTWGWGKDGQLV 271
>gi|160774403|gb|AAI55388.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus (Silurana) tropicalis]
Length = 530
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 106/257 (41%), Gaps = 36/257 (14%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + + V+++G GT +S I+ LCG D+ G L
Sbjct: 32 NEAIYTTQNNEVFVFGMNSSNCLGTGDNQSTIIPRRLDVLCG-KRIVDLSYGSGPHILVC 90
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
+E G++ +WG G S L +G + P + E VV+ A G H +++T G
Sbjct: 91 NEDGEVYSWGH---NGYSQLGNGNAIQGVAPVQVCMELLAKKVVQVACGSHHSMALTSDG 147
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
EV+ WG+ C G GS +T QS +P + + + + +S
Sbjct: 148 EVFCWGYNNC----------GQVGS---GTTANQS-VPRRVSATLQSKVVVSIAAGQSSS 193
Query: 184 SAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
A ++ + G+ L PC + V I +V G HTL LSD G
Sbjct: 194 MAVTDNGHVYCWGYNGTGQLGIGNTGNQLMPCRLVFAHPVCIIQVVLGYAHTLALSDQGV 253
Query: 233 VWGWGYGGEGQLGLGSR 249
++ WG GQLG+G++
Sbjct: 254 LYAWGANSHGQLGIGNK 270
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 25/128 (19%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T+ P + + G +I ++ G G H L+ ++ G+V+ WG+ G QLG G+ I+
Sbjct: 56 TGDNQSTIIPRRLDVLCGKRIVDLSYGSGPHILVCNEDGEVYSWGHNGYSQLGNGNAIQG 115
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
V + C+E LL ++ V ++ACG HS +T G +
Sbjct: 116 VAPVQV--CME---------LLAKK-------------VVQVACGSHHSMALTSDGEVFC 151
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 152 WGYNNCGQ 159
>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
Length = 1050
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 130/332 (39%), Gaps = 79/332 (23%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
WGY P SP L I A ++CG S + V CG ++ E G++ T G +
Sbjct: 4 WGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-VNT 62
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
+GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 63 KGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGA---------- 110
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
GS G G + + P ++ ++ + + S A+ +FFT
Sbjct: 111 ---GSDGQL-----GLMTIEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 160
Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
SP V G+ + +V AGG H+ LS G V+GWG G
Sbjct: 161 WGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
QLGL KDR P V+ V I+CG H
Sbjct: 221 QLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGEEH 253
Query: 301 SAVVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
+AV+T +G + TFG G GQ L D +N
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQ-----LGHDSMN 280
>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 111/308 (36%), Gaps = 73/308 (23%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA + GKL TWG + K P ++V+AA G HC++V +
Sbjct: 50 SLAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQ 109
Query: 123 GEVYTWGWRE----------------------CVP----SAKVTRDFGSAGSFQKDSTGK 156
G Y WG E +P S V R + G+ T +
Sbjct: 110 GRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTHSVVLTRE 169
Query: 157 QSALPTEQA-PPSDKRAGEEVVKRRKTSSAR-----------------------EESENP 192
Q PP D + V+ + R E
Sbjct: 170 GHVWSWGQPWPPGDIKQISVPVRVQGLERVRLIAVGAFHNLALQEDGTLWAWGNNEYGQL 229
Query: 193 ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD P V G+ + +AAGG H+ L+D G+V+GWG G G+LG G K
Sbjct: 230 GTGDTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDK- 288
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
+ ++P + G+D + +++CGG HS +T G + T
Sbjct: 289 --SSKMVPQRVNLLVGED--------------------IVQVSCGGTHSVALTRDGRMYT 326
Query: 313 FGWGLYGQ 320
FG G +G+
Sbjct: 327 FGRGDHGR 334
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
D+ + P V L G I +V+ GG H++ L+ G+++ +G G G+LG G ++
Sbjct: 287 DKSSKMVPQRVNLLVGEDIVQVSCGGTHSVALTRDGRMYTFGRGDHGRLGYGRKV-TTGQ 345
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P +P D P ++ SG AGR K +A GGRH+ + +
Sbjct: 346 PMEVPI--------DIP---PPKNLTDSGDAGRWIAKLVASGGRHTLAIVE 385
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 59/137 (43%), Gaps = 12/137 (8%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
+ P PI + G + D+ GG + A ++ G++ WG + + + K +
Sbjct: 233 DTQPRSQPITVQGLSGLTLVDIAAGGW-HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSK 291
Query: 94 -TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
P+ L +V+ + G H V++T G +YT+G D G G +K
Sbjct: 292 MVPQRVNLLVGEDIVQVSCGGTHSVALTRDGRMYTFG----------RGDHGRLGYGRKV 341
Query: 153 STGKQSALPTEQAPPSD 169
+TG+ +P + PP +
Sbjct: 342 TTGQPMEVPIDIPPPKN 358
Score = 38.1 bits (87), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 40/149 (26%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG---------LGSRIKMVP 254
C+V K+ V AG R++L + D G+++ WG+ G LG + S++K +
Sbjct: 30 CIVKALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALA 89
Query: 255 TPHLIP-------CL--------------EHAASGKD--------RPLLVRQGSVNSSGK 285
+++ CL E+ G++ RPL R+ V
Sbjct: 90 NVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPL--RRDIVIPQRC 147
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFG 314
A + V+++A GG HS V+T G + ++G
Sbjct: 148 ASKLVVRQVAAGGTHSVVLTREGHVWSWG 176
>gi|27695022|gb|AAH43960.1| LOC398469 protein, partial [Xenopus laevis]
Length = 589
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 108/257 (42%), Gaps = 36/257 (14%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + + V+++G GT +S I+ LCG D+ G L
Sbjct: 91 NEAIYTTQNNEVFVFGMNISSCLGTGDNQSTIMPRRLDVLCG-KKIVDLSYGSGPHILLC 149
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
+E G++ +WG G S L +G + P + E V++ A G H +++T G
Sbjct: 150 NEDGEVYSWGH---NGYSQLGNGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALTSDG 206
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
EV++WG+ C G GS +T QS +P + A + + + +S
Sbjct: 207 EVFSWGYNNC----------GQVGS---GTTANQS-VPRKVASSLQSKVVVSISAGQTSS 252
Query: 184 SAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
A ++ + G+ L PC + + I +V G HTL LSD G
Sbjct: 253 MALTDNGHVYGWGYNGTGQLGLGNTGNQLMPCRLVFAQPICIIQVVLGYAHTLALSDQGV 312
Query: 233 VWGWGYGGEGQLGLGSR 249
++ WG GQLG+G++
Sbjct: 313 LYAWGANSHGQLGIGNK 329
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 25/128 (19%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T+ P + + G KI ++ G G H L+ ++ G+V+ WG+ G QLG G+ I+
Sbjct: 115 TGDNQSTIMPRRLDVLCGKKIVDLSYGSGPHILLCNEDGEVYSWGHNGYSQLGNGNTIQ- 173
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T + C+E LL ++ V ++ACG HS +T G + +
Sbjct: 174 -GTTPVQVCME---------LLSKK-------------VIQVACGSHHSMALTSDGEVFS 210
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 211 WGYNNCGQ 218
>gi|351542221|ref|NP_001082438.2| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus laevis]
Length = 600
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 108/257 (42%), Gaps = 36/257 (14%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + + V+++G GT +S I+ LCG D+ G L
Sbjct: 102 NEAIYTTQNNEVFVFGMNISSCLGTGDNQSTIMPRRLDVLCG-KKIVDLSYGSGPHILLC 160
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
+E G++ +WG G S L +G + P + E V++ A G H +++T G
Sbjct: 161 NEDGEVYSWGH---NGYSQLGNGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALTSDG 217
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
EV++WG+ C G GS +T QS +P + A + + + +S
Sbjct: 218 EVFSWGYNNC----------GQVGS---GTTANQS-VPRKVASSLQSKVVVSISAGQTSS 263
Query: 184 SAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
A ++ + G+ L PC + + I +V G HTL LSD G
Sbjct: 264 MALTDNGHVYGWGYNGTGQLGLGNTGNQLMPCRLVFAQPICIIQVVLGYAHTLALSDQGV 323
Query: 233 VWGWGYGGEGQLGLGSR 249
++ WG GQLG+G++
Sbjct: 324 LYAWGANSHGQLGIGNK 340
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 25/128 (19%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T+ P + + G KI ++ G G H L+ ++ G+V+ WG+ G QLG G+ I+
Sbjct: 126 TGDNQSTIMPRRLDVLCGKKIVDLSYGSGPHILLCNEDGEVYSWGHNGYSQLGNGNTIQ- 184
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T + C+E LL ++ V ++ACG HS +T G + +
Sbjct: 185 -GTTPVQVCME---------LLSKK-------------VIQVACGSHHSMALTSDGEVFS 221
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 222 WGYNNCGQ 229
>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
Length = 835
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 120/317 (37%), Gaps = 91/317 (28%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
++ +L P + +DV GCG + + G + T G +D GQ L K
Sbjct: 18 DEEIVLEPRKSDFFANKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
+ PE ++V + G AH +++ + G+VY+WG
Sbjct: 72 RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGL--------------------- 110
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
DS G+ L +E E + R S +
Sbjct: 111 DSDGQLGLLGSE----------EYIRVPRNIKSLSD------------------------ 136
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG K +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VTDAGALLTFGWGLYGQ 320
+T G + TFG G YGQ
Sbjct: 257 LTKEGGVFTFGAGGYGQ 273
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 114/288 (39%), Gaps = 46/288 (15%)
Query: 43 PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
P ++ D+ +++ CG A LA ++ G++ +WG D L S ++ P
Sbjct: 75 PEQVVALDA-QNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKS 133
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG--SFQKDSTGKQS 158
++ +V+ A G+ H +++++A EV+ WG + +G G K T Q
Sbjct: 134 LSDIQIVQVACGYYHSLALSKASEVFCWGQNK----------YGQLGLGIDCKKQTSPQL 183
Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVK 213
P AG S A R + DE P L+ K
Sbjct: 184 IKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK 243
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
I + G HT L+ G V+ +G GG GQLG S T H I R +
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKV 288
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
GS+ V ++ACG +H SA V +G + +FG G GQ
Sbjct: 289 FELMGSI----------VTQVACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
pisum]
Length = 4404
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 45/123 (36%), Positives = 64/123 (52%), Gaps = 27/123 (21%)
Query: 199 FTLSPCLVT-LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
+ ++P LV LN +K+ V +GGRH L LS G+V+ WG G +G+LGLG+R+ H
Sbjct: 3620 YVVTPQLVQGLNNIIKVA-VNSGGRHCLALSTTGEVYAWGDGDDGKLGLGNRVT-----H 3673
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
P L + S K + +IACGG HSA ++ G L T+G G
Sbjct: 3674 SKPQLVQSLSDK--------------------CIIDIACGGFHSAAISRYGHLYTWGKGR 3713
Query: 318 YGQ 320
YG+
Sbjct: 3714 YGR 3716
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/109 (35%), Positives = 51/109 (46%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+K V +GG+H + LS G+V WG G +G+LG G I + TP LI L
Sbjct: 2680 IKTVAVHSGGKHAMALSLDGKVLSWGDGEDGKLGHGD-ILTLDTPKLIDSL--------- 2729
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
A R + IACG HSA +T G L T+G G YG+
Sbjct: 2730 -------------LAKRVFY--IACGSAHSAAITSDGELYTWGQGQYGR 2763
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 76/310 (24%), Positives = 115/310 (37%), Gaps = 73/310 (23%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+SP + P LS + S G A+A S GK+++WG +D GK
Sbjct: 2667 SSPRQIPGLSQFVIKTVAVHS-------GGKHAMALSLDGKVLSWGDGED--------GK 2711
Query: 91 --HGE-----TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDF 143
HG+ TP+ V A G AH ++T GE+YTWG + +
Sbjct: 2712 LGHGDILTLDTPKLIDSLLAKRVFYIACGSAHSAAITSDGELYTWGQGQ----------Y 2761
Query: 144 GSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--ASGDEFF-- 199
G G D + + P K + R + +SE + GD F
Sbjct: 2762 GRLG--HSDEVSQHT--PKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGDGDFGK 2817
Query: 200 --------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
+P V G ++ ++ G + ++ L+ GQVW WG G +LGLG
Sbjct: 2818 LGRGGSDGCCTPQKVERLVGHRVVQIECGAQFSVALTATGQVWTWGKGEYYRLGLGRG-- 2875
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
EH RP LV Q + + + IA G H V+ G +
Sbjct: 2876 -----------EHVR----RPTLVNQLKLVT--------IDHIAVGTLHCIAVSTQGDVY 2912
Query: 312 TFGWGLYGQR 321
+G +GQ+
Sbjct: 2913 CWGDNDHGQQ 2922
Score = 46.2 bits (108), Expect = 0.021, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A S +G L TWG D + S +H P+P +V+ + G H ++
Sbjct: 3799 GSQFSVALSANGTLYTWGKGDYFRLGH-GSSEHVRKPKPVSGLQGKKIVQFSTGSLHVLA 3857
Query: 119 VTEAGEVYTWG 129
+T+ GEVY WG
Sbjct: 3858 LTDDGEVYAWG 3868
Score = 44.3 bits (103), Expect = 0.074, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 25/91 (27%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G KI + + G H L L+D G+V+ WG EGQLG G T H I +
Sbjct: 3842 GKKIVQFSTGSLHVLALTDDGEVYAWGDNDEGQLGDG-------TAHPI--------ARP 3886
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
RP+ +G +++++CG HS
Sbjct: 3887 RPIAALKG----------KRIQQVSCGSAHS 3907
Score = 42.0 bits (97), Expect = 0.38, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 64 LATSESGKLITWG----SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSV 119
LA ++ G++ +WG A GQ Y + TPEP ++ VV + G C +V
Sbjct: 505 LAVTQKGEVYSWGVNEFGALGHGQKYSSF----PTPEPIVAFSKLIVVMVSCGKDFCAAV 560
Query: 120 TEAGEVYTWG 129
TE G++Y WG
Sbjct: 561 TEDGKLYMWG 570
Score = 37.7 bits (86), Expect = 7.3, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LA S +G++ WG DD G+ L + P+ ++ ++ A G H +++ G
Sbjct: 3646 LALSTTGEVYAWGDGDD-GKLGLGNRVTHSKPQLVQSLSDKCIIDIACGGFHSAAISRYG 3704
Query: 124 EVYTWG 129
+YTWG
Sbjct: 3705 HLYTWG 3710
>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
Length = 430
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 115/297 (38%), Gaps = 50/297 (16%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
S + P P + G + + G LA + G++ +WG + GQ L
Sbjct: 94 NSSDLFVPHPIKALQGLEIRQIACGDS-HCLAVTADGEVYSWGR-NQNGQLGLGDTDDSL 151
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
P SV AAG H +VT++G++Y WGW G G+
Sbjct: 152 VPHKLLAFEGVSVKMLAAGAEHTAAVTDSGKLYGWGW-------------GRYGNLGLGD 198
Query: 154 TGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSP 203
G + LP E D++ R T + + + GD L P
Sbjct: 199 RGDR-MLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLP 257
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
V IT+V+ G RHT+ L++ G+++GWG+ GQ+G G + +P LI
Sbjct: 258 HQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGD-VDDHTSPQLISI-- 314
Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G+ R V +++CG RH+ VTD + ++G G GQ
Sbjct: 315 -------------------PGQHQR--VVQVSCGWRHTVAVTDKNNVYSWGRGTSGQ 350
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 87/225 (38%), Gaps = 44/225 (19%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGK 156
E S+V A S T +Y+WGW DFG G F
Sbjct: 58 EISLVACGADHTTAYSATRL-TIYSWGWG----------DFGRLGHGNSSDLFVPHPIKA 106
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
L Q D S R ++ GD +L P + GV +
Sbjct: 107 LQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKM 166
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAASGKDRPLLV 275
+AAG HT ++D G+++GWG+G G LGLG R +M+P E A G ++ +V
Sbjct: 167 LAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLPA-------EVPAVGDEKMCMV 219
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
ACG RH+ V+ +G L T+GW YGQ
Sbjct: 220 -------------------ACGWRHTIAVSQSGKLYTYGWSKYGQ 245
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 84/203 (41%), Gaps = 66/203 (32%)
Query: 55 VCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEASVVKAA 110
+C CG+ +A S+SGKL T+G + GQ L G + + P E ++ + +
Sbjct: 216 MCMVACGWRHTIAVSQSGKLYTYGWSK-YGQ--LGHGDYADHLLPHQVAALAEFNITQVS 272
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
GW H V++TEAG++Y WGW + FG GS
Sbjct: 273 GGWRHTVALTEAGKLYGWGWNK----------FGQVGS---------------------- 300
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV--KITKVAAGGRHTLILS 228
GD SP L+++ PG ++ +V+ G RHT+ ++
Sbjct: 301 ------------------------GDVDDHTSPQLISI-PGQHQRVVQVSCGWRHTVAVT 335
Query: 229 DMGQVWGWGYGGEGQLGLGSRIK 251
D V+ WG G GQLG G +
Sbjct: 336 DKNNVYSWGRGTSGQLGHGDAVD 358
>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Sarcophilus harrisii]
Length = 1057
Score = 68.6 bits (166), Expect = 5e-09, Method: Composition-based stats.
Identities = 77/298 (25%), Positives = 111/298 (37%), Gaps = 88/298 (29%)
Query: 53 KDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K V GCG + + G + T G +D GQ L K + PE ++V +
Sbjct: 34 KKVQDVGCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVS 90
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G AH +++ + G+VY WG D+ G Q LP
Sbjct: 91 CGEAHTLALNDKGQVYAWGL---------------------DTDG-QLGLP--------- 119
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
G E + P + ++I ++A G H+L LS
Sbjct: 120 ------------------------GTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKG 155
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV---- 280
+V+ WG GQLGLG +K +P L IP + AA G +L G++
Sbjct: 156 SEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWG 215
Query: 281 -NSSGKAG----------------RSY-VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
N G+ G RS + I CG H+A +T G + TFG G YGQ
Sbjct: 216 RNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 58.5 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 70/276 (25%), Positives = 113/276 (40%), Gaps = 41/276 (14%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLT-SGKHGETPEPFPLPTEASVVKA 109
+++ CG A LA ++ G++ WG D +GQ L + ++ P T+ +V+
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWG-LDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQI 142
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK--QSAL--PTEQA 165
A G+ H +++++ EV++WG + G ++ S+ + +S L P Q
Sbjct: 143 ACGYYHSLALSKGSEVFSWGQNK-------HGQLGLGFELKRQSSPQLIKSLLGIPFTQV 195
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
+ + R + DE P L+ KI + G HT
Sbjct: 196 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTA 255
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 256 ALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI----- 295
Query: 286 AGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V +G + +FG G GQ
Sbjct: 296 -----VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Sarcophilus harrisii]
Length = 1049
Score = 68.2 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 77/298 (25%), Positives = 111/298 (37%), Gaps = 88/298 (29%)
Query: 53 KDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K V GCG + + G + T G +D GQ L K + PE ++V +
Sbjct: 34 KKVQDVGCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVS 90
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G AH +++ + G+VY WG D+ G Q LP
Sbjct: 91 CGEAHTLALNDKGQVYAWGL---------------------DTDG-QLGLP--------- 119
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
G E + P + ++I ++A G H+L LS
Sbjct: 120 ------------------------GTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKG 155
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV---- 280
+V+ WG GQLGLG +K +P L IP + AA G +L G++
Sbjct: 156 SEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWG 215
Query: 281 -NSSGKAG----------------RSY-VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
N G+ G RS + I CG H+A +T G + TFG G YGQ
Sbjct: 216 RNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 58.5 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 70/276 (25%), Positives = 113/276 (40%), Gaps = 41/276 (14%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLT-SGKHGETPEPFPLPTEASVVKA 109
+++ CG A LA ++ G++ WG D +GQ L + ++ P T+ +V+
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWG-LDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQI 142
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK--QSAL--PTEQA 165
A G+ H +++++ EV++WG + G ++ S+ + +S L P Q
Sbjct: 143 ACGYYHSLALSKGSEVFSWGQNK-------HGQLGLGFELKRQSSPQLIKSLLGIPFTQV 195
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
+ + R + DE P L+ KI + G HT
Sbjct: 196 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTA 255
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 256 ALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI----- 295
Query: 286 AGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V +G + +FG G GQ
Sbjct: 296 -----VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|323451188|gb|EGB07066.1| hypothetical protein AURANDRAFT_71888 [Aureococcus anophagefferens]
Length = 1060
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 74/149 (49%), Gaps = 29/149 (19%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA---- 266
GV++ VAA G HTL L D G+V+ WG G EGQLG G+ + VP P I L +
Sbjct: 117 GVRVVAVAARGAHTLALDDRGRVYSWGRGDEGQLGHGA-FEAVPHPRRIARLPTSVVAVG 175
Query: 267 SGKDRPL-LVRQGSVNS-----SGKAGR------------SYVK-----EIACGGRHSAV 303
+G+ L L G+V S G G + K ++CG RH+AV
Sbjct: 176 AGRTHSLALDADGAVYSWGCGDDGALGHGDRRRQLAPRAVEFFKTRPAAAVSCGSRHNAV 235
Query: 304 VTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
VT GAL+T+GW YGQ A GDG+
Sbjct: 236 VTADGALVTWGWAAYGQCGASA-GGDGLR 263
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 89/263 (33%), Gaps = 90/263 (34%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEP---FPLPTEASVVKAAAGWAHCVSVT 120
LA + G++ +WG D EGQ L G P P LPT SVV AG H +++
Sbjct: 131 LALDDRGRVYSWGRGD-EGQ--LGHGAFEAVPHPRRIARLPT--SVVAVGAGRTHSLALD 185
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
G VY+WG G AL RR
Sbjct: 186 ADGAVYSWG------------------------CGDDGALGHGD--------------RR 207
Query: 181 KTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
+ + R EFF P V+ G RH +++ G + WG+
Sbjct: 208 RQLAPRAV--------EFFKTRPA----------AAVSCGSRHNAVVTADGALVTWGWAA 249
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
GQ G A++G D +R V G G V ACG RH
Sbjct: 250 YGQCG-------------------ASAGGDG---LRPAEVPLPGDGGAECVLA-ACGYRH 286
Query: 301 SAVVT---DAGALLTFGWGLYGQ 320
+ T A+ FGW YGQ
Sbjct: 287 TLCATRHASGDAIWAFGWNAYGQ 309
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 91/295 (30%), Gaps = 63/295 (21%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
P P R+ + G G +LA G + +WG DD + + P
Sbjct: 159 PHPRRIARLPTSVVAVGAGRTHSLALDADGAVYSWGCGDDGALGH-GDRRRQLAPRAVEF 217
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
+ G H VT G + TWGW +G G+ S G
Sbjct: 218 FKTRPAAAVSCGSRHNAVVTADGALVTWGWAA----------YGQCGA----SAGGDGLR 263
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL----------SPCLVTL-- 208
P E P D G E V + ASGD + S C
Sbjct: 264 PAEVPLPGD--GGAECVLAACGYRHTLCATRHASGDAIWAFGWNAYGQCGGSTCSAAAPR 321
Query: 209 ------------NPGVKITKVAAGGRHTLILSDM----GQVWGWGYGGEGQLGLGSRIKM 252
G + ++AGGRH++ + + WG G +GQLG G R
Sbjct: 322 RVGGKFLGSQEGGDGAVVEALSAGGRHSVCCVRLPGGGTATYAWGRGDDGQLGSGDRRDR 381
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA 307
P + S RPL + +ACG H+ V DA
Sbjct: 382 RANPRVAATAARVNSVGQRPL------------------RGLACGWAHTVFVVDA 418
>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 420
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 98/260 (37%), Gaps = 44/260 (16%)
Query: 69 SGKLI-TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE-VY 126
SG L+ +WG +D GQ + P + + G H + +E+ VY
Sbjct: 31 SGDLVCSWGRGED-GQLGHGDAEERHLPLVISALDDCEISSITCGADHTTARSESTRTVY 89
Query: 127 TWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
+WGW DFG G F + L +Q D
Sbjct: 90 SWGWG----------DFGRLGHGNSSDLFIPRAIKGLKGLEIKQIACGDSHCLAITGDGE 139
Query: 181 KTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
S R ++ G L P V G+ + +AAG HT +++ G+++GWG+G
Sbjct: 140 VHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTESGKLYGWGWGR 199
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
G LGLG R L+P A G+ L +ACG RH
Sbjct: 200 YGNLGLGDR-----NDRLVPGEVAAVPGEKMNL--------------------VACGWRH 234
Query: 301 SAVVTDAGALLTFGWGLYGQ 320
+ V ++G L TFGW YGQ
Sbjct: 235 TIAVANSGNLYTFGWSKYGQ 254
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 101/260 (38%), Gaps = 67/260 (25%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
+ + A G +HC+++T GEV++WG ++ G+ TE
Sbjct: 121 IKQIACGDSHCLAITGDGEVHSWG---------------------RNQNGQLGLGHTEDV 159
Query: 166 PPSDKRAGEEVVKRRKTSSAREESE-----------------NPASGDEFFTLSPCLVTL 208
+K A E + + ++ E + N GD L P V
Sbjct: 160 LVPNKVAAFEGIAVKMLAAGAEHTAAVTESGKLYGWGWGRYGNLGLGDRNDRLVPGEVAA 219
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH---- 264
PG K+ VA G RHT+ +++ G ++ +G+ GQLG G + PH + L++
Sbjct: 220 VPGEKMNLVACGWRHTIAVANSGNLYTFGWSKYGQLGHGDFEDHL-VPHQVQALKNKTIQ 278
Query: 265 AASG--KDRPLLVRQGSV-----NSSGKAG-----------------RSYVKEIACGGRH 300
A SG + L G + N G+ G V + CG RH
Sbjct: 279 AVSGGWRHTVALDEDGELYGWGWNKFGQVGCGNTDDHNSPKLITGIVNEKVTRVTCGWRH 338
Query: 301 SAVVTDAGALLTFGWGLYGQ 320
+ +TD G + ++G G GQ
Sbjct: 339 TVAITDRGNVYSWGRGTSGQ 358
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 83/202 (41%), Gaps = 28/202 (13%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETP-EPFPLPTEASVVKAAAGWAHCVSVTEAG 123
A +ESGKL WG G L P E +P E + A GW H ++V +G
Sbjct: 185 AVTESGKLYGWGWGR-YGNLGLGDRNDRLVPGEVAAVPGEKMNL-VACGWRHTIAVANSG 242
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
+YT+GW + +G G + +P + +K R T
Sbjct: 243 NLYTFGWSK----------YGQLGHGDFE----DHLVPHQVQALKNKTIQAVSGGWRHTV 288
Query: 184 SAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
+ E+ E G+ SP L+T K+T+V G RHT+ ++D G V
Sbjct: 289 ALDEDGELYGWGWNKFGQVGCGNTDDHNSPKLITGIVNEKVTRVTCGWRHTVAITDRGNV 348
Query: 234 WGWGYGGEGQLGLGSRI-KMVP 254
+ WG G GQLG G + + VP
Sbjct: 349 YSWGRGTSGQLGHGDAVDRCVP 370
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A E G+L WG + GQ + +P+ V + GW H V
Sbjct: 282 GGWRHTVALDEDGELYGWG-WNKFGQVGCGNTDDHNSPKLITGIVNEKVTRVTCGWRHTV 340
Query: 118 SVTEAGEVYTWG 129
++T+ G VY+WG
Sbjct: 341 AITDRGNVYSWG 352
>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
Length = 992
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 113/296 (38%), Gaps = 96/296 (32%)
Query: 30 GTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
G PE+ P L + L CG + +LA G++ WG+A EGQ L
Sbjct: 35 GEQPERIPALETLHVALVSCGKEH-----------SLAVCHKGRVFAWGAAS-EGQ--LG 80
Query: 88 SGKHGET---PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
G+ ET P+ + +++ A G H ++++E G+V++WG G
Sbjct: 81 IGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSEDGQVFSWG----------KNSHG 130
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPC 204
G GK+ P+ QA P R+ E
Sbjct: 131 QLG------LGKE--FPS-QASPQRVRSLE------------------------------ 151
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
G+ + +VAAGG H+ LS G +GWG GQL L +
Sbjct: 152 ------GIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSG--------------NN 191
Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
A + +P+LV G V I+CG H+AV+T G + TFG YGQ
Sbjct: 192 APVQRYKPVLV--------GALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQ 239
>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
Length = 443
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 106/275 (38%), Gaps = 55/275 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVKAAAG 112
G ++A L +WG +D GQ HG+ + +PT S + G
Sbjct: 22 GASHSVALLTGNVLCSWGRGED-GQL-----GHGDAEDRL-VPTVLSGFDAPGITSVICG 74
Query: 113 WAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQA 165
H + +E +VY+WGW DFG G F L +Q
Sbjct: 75 ADHTTAYSEDELQVYSWGWG----------DFGRLGHGNSSDVFTPQPVKALQGLKIKQI 124
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
D + + S R ++ G +L P + GV + +AAG HT
Sbjct: 125 ACGDSHCLAVTMAGQVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGVCVKMIAAGAEHTA 184
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
+++ G ++GWG+G G LGLG R L+P + G+ L
Sbjct: 185 AVTEDGDLYGWGWGRYGNLGLGDR-----NDRLLPEKVSSVEGEKMVL------------ 227
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ACG RH+ V+D+G L T+GW YGQ
Sbjct: 228 --------VACGWRHTITVSDSGNLYTYGWSKYGQ 254
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 121/315 (38%), Gaps = 54/315 (17%)
Query: 19 ETVVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
E VY WG + S + +P P + G K + G LA + +G++ +W
Sbjct: 85 ELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDS-HCLAVTMAGQVQSW 143
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP 135
G + GQ L + + P+ V AAG H +VTE G++Y WGW
Sbjct: 144 GR-NQNGQLGLGTTEDSLLPQKIQAFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGR--- 199
Query: 136 SAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----- 190
+G+ G ++ LP + + ++ R T + +
Sbjct: 200 -------YGNLGLGDRND----RLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYG 248
Query: 191 -----NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
GD L P + I++++ G RHT+ L+ G+++GWG+ GQ+G
Sbjct: 249 WSKYGQLGHGDFEDHLVPHKLEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVG 308
Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+G+ H P H + + ++ACG RH+ ++
Sbjct: 309 VGNN-----DDHCSPVQVHFPEDQK--------------------ISQVACGWRHTLALS 343
Query: 306 DAGALLTFGWGLYGQ 320
+ + ++G G GQ
Sbjct: 344 EKKNVFSWGRGTSGQ 358
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 82/214 (38%), Gaps = 26/214 (12%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G L WG G L PE +V A GW H ++V+++G
Sbjct: 185 AVTEDGDLYGWGWGR-YGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGN 243
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + +P + D + R T +
Sbjct: 244 LYTYGWSK----------YGQLGH----GDFEDHLVPHKLEALKDSTISQISGGWRHTMA 289
Query: 185 AREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
E + G+ SP V KI++VA G RHTL LS+ V+
Sbjct: 290 LTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFPEDQKISQVACGWRHTLALSEKKNVF 349
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
WG G GQLG G + TP LI L SG
Sbjct: 350 SWGRGTSGQLGNGEIVDR-NTPVLIDALSTDGSG 382
>gi|417411454|gb|JAA52162.1| Putative alpha-tubulin suppressor, partial [Desmodus rotundus]
Length = 534
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 117/321 (36%), Gaps = 89/321 (27%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 35 GTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLIPKKLEALCG-KKIKSLSYGSGPH 93
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H V++
Sbjct: 94 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVAL 150
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEV+ WG+ C G GS ST Q P K +KR
Sbjct: 151 AADGEVFAWGYNNC----------GQVGS---GSTANQ--------PTPRKVTNCLHIKR 189
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+ +A G ++ + D G+V+GWGY
Sbjct: 190 ----------------------------------VVGIACGQTSSMAVLDNGEVYGWGYN 215
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G GQLGLG+ + + TP VR +++S V +I CG
Sbjct: 216 GNGQLGLGNNVNQL-TP------------------VRVAALHSVC------VNQIVCGYA 250
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
H+ +TD G L +G YGQ
Sbjct: 251 HTLALTDEGLLYAWGANTYGQ 271
>gi|348683616|gb|EGZ23431.1| hypothetical protein PHYSODRAFT_258036 [Phytophthora sojae]
Length = 1271
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 129/337 (38%), Gaps = 69/337 (20%)
Query: 11 NEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESG 70
N+ E + +++WG P +L P L G V GG TS +G
Sbjct: 458 NDHQSEEPSSHMWVWGRPPSLEGGTPLVLRPKQVSLLNGQPIVQVACGGEHLLYLTS-TG 516
Query: 71 KLITWGSADDEGQSYLTSGKHGETPE---PFPLPTEASVVKA---------AAGWAHCVS 118
+ ++G +D+ + +T + + + + E ++ KA + G H ++
Sbjct: 517 DVYSYGDNEDKKAAAVTIATNANSADNDYTRSISKELALEKALHRTTIAMISCGAQHSLA 576
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+T+AGE+YTWG E G G + A+P
Sbjct: 577 ITDAGELYTWGSGED----------GRLGH----GDMRDRAVP----------------- 605
Query: 179 RRKTSSAREESENPAS---GDEFFTLSPCLVTLNP-GVKITKVAAGGRHTLILSDMGQVW 234
RK S ES AS GD + +P + P G +I+ V G T L G ++
Sbjct: 606 -RKVMSLLRESVASASCGLGDNKWRDTPHQIVGFPQGTRISNVVCGWNFTAALDRQGNIF 664
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
WG GEGQ GLG K P + L A+G S ++
Sbjct: 665 TWGKTGEGQCGLGYVDKDQVVPRCVEKLREVAAG--------------------SAAVDV 704
Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQRMAKCLAGDGI 331
ACG H+ V+T +G L ++G G YGQ L D +
Sbjct: 705 ACGYTHTVVLTASGELYSWGLGEYGQLARVQLPSDAL 741
>gi|302808359|ref|XP_002985874.1| hypothetical protein SELMODRAFT_182077 [Selaginella moellendorffii]
gi|300146381|gb|EFJ13051.1| hypothetical protein SELMODRAFT_182077 [Selaginella moellendorffii]
Length = 394
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 115/312 (36%), Gaps = 78/312 (25%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA E G+L TWG + K TP +V+AA G HC++V E
Sbjct: 50 SLAICEDGRLFTWGWNQRGTLGHPPETKTESTPSQVKALANVKIVQAAIGGWHCLAVDEE 109
Query: 123 GEVYTWG---WRECV--PSAKVTRDFGSAGSFQKDST-----------------GKQSAL 160
G Y WG + +C K ++ G + +D T G S +
Sbjct: 110 GRTYAWGGNEYGQCAEEQQTKEQQNKGESKVLHRDITIPQRCAPRLCVRQLTAGGTHSVV 169
Query: 161 PTEQA---------PPSDKRAGEEVVKRRKTSSA-----------------------REE 188
TE+ PP D + V+ + + E
Sbjct: 170 LTEEGHVWTWGQPWPPGDIKQISVPVRVQGLENVTMIAVGAFHNLALVQHGEVWAWGNNE 229
Query: 189 SENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
+GD SP V G+ + +AAGG H++ L+ G V+GWG G G+LG G
Sbjct: 230 YGQLGTGDTQPRSSPVPVKGLTGLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGRLGFGD 289
Query: 249 RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAG 308
+ ++P H +G+ V +++CGG HS T +G
Sbjct: 290 D----KSSKMLPQKVHLLAGEP--------------------VVQVSCGGTHSVAATISG 325
Query: 309 ALLTFGWGLYGQ 320
+ +FG G +G+
Sbjct: 326 RMFSFGRGDHGR 337
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 106/272 (38%), Gaps = 36/272 (13%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
IP R + + GG ++ +E G + TWG G + P +
Sbjct: 147 IPQRCAPRLCVRQLTAGGT-HSVVLTEEGHVWTWGQP-------WPPGDIKQISVPVRVQ 198
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
+V A G H +++ + GEV+ WG ++G G+ D+ + S +P
Sbjct: 199 GLENVTMIAVGAFHNLALVQHGEVWAWG----------NNEYGQLGT--GDTQPRSSPVP 246
Query: 162 TEQAP---PSDKRAGEEVVKRRKTSSA-----REESENPASGDEFFT-LSPCLVTLNPGV 212
+ D AG A R E GD+ + + P V L G
Sbjct: 247 VKGLTGLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGRLGFGDDKSSKMLPQKVHLLAGE 306
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+ +V+ GG H++ + G+++ +G G G+LG + P +P H S R
Sbjct: 307 PVVQVSCGGTHSVAATISGRMFSFGRGDHGRLGYSGAVT-TGHPVEVPVSLHHYS---RH 362
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
+V + N S VK +ACGGRH+ V
Sbjct: 363 NIVSEDEANGSTGW---VVKLVACGGRHALAV 391
>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
Length = 1056
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 76/292 (26%), Positives = 111/292 (38%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG DS G+ L +E+ V
Sbjct: 97 LALNDKGQVYAWGL---------------------DSDGQLGLLGSEECI--------RV 127
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ K+ S ++I +VA G H+L LS +V+ W
Sbjct: 128 PRNIKSLS--------------------------DIQIVQVACGYYHSLALSKASEVFCW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG K +P L IP ++ AA G +L G++ N G+
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 286 AGRS-----YVKE------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + YV I CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 69/279 (24%), Positives = 107/279 (38%), Gaps = 47/279 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS--------ALPT 162
G+ H +++++A EV+ WG + +G G D + S +P
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK----------YGQLG-LGIDCKKQASPQLIKSLLGIPF 192
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + R + DE P L+ KI + G
Sbjct: 193 MQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGED 252
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
HT L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI-- 295
Query: 283 SGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V +G + +FG G GQ
Sbjct: 296 --------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Ovis aries]
Length = 1049
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 76/292 (26%), Positives = 111/292 (38%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG DS G+ L +E+ V
Sbjct: 97 LALNDKGQVYAWGL---------------------DSDGQLGLLGSEECI--------RV 127
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ K+ S ++I +VA G H+L LS +V+ W
Sbjct: 128 PRNIKSLS--------------------------DIQIVQVACGYYHSLALSKASEVFCW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG K +P L IP ++ AA G +L G++ N G+
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 286 AGRS-----YVKE------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + YV I CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 69/279 (24%), Positives = 107/279 (38%), Gaps = 47/279 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS--------ALPT 162
G+ H +++++A EV+ WG + +G G D + S +P
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK----------YGQLG-LGIDCKKQASPQLIKSLLGIPF 192
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + R + DE P L+ KI + G
Sbjct: 193 MQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGED 252
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
HT L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI-- 295
Query: 283 SGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V +G + +FG G GQ
Sbjct: 296 --------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Ovis aries]
Length = 1057
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 76/292 (26%), Positives = 111/292 (38%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG DS G+ L +E+ V
Sbjct: 97 LALNDKGQVYAWGL---------------------DSDGQLGLLGSEECI--------RV 127
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ K+ S ++I +VA G H+L LS +V+ W
Sbjct: 128 PRNIKSLS--------------------------DIQIVQVACGYYHSLALSKASEVFCW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG K +P L IP ++ AA G +L G++ N G+
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 286 AGRS-----YVKE------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + YV I CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 69/279 (24%), Positives = 107/279 (38%), Gaps = 47/279 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS--------ALPT 162
G+ H +++++A EV+ WG + +G G D + S +P
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK----------YGQLG-LGIDCKKQASPQLIKSLLGIPF 192
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + R + DE P L+ KI + G
Sbjct: 193 MQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGED 252
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
HT L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI-- 295
Query: 283 SGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V +G + +FG G GQ
Sbjct: 296 --------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
Length = 430
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 115/299 (38%), Gaps = 54/299 (18%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKH 91
S + P P + G + + CG LA + G++ +WG + GQ L
Sbjct: 94 NSSDLFVPHPIKALQGLEIRQIA---CGDSHCLAVTADGEVYSWGR-NQNGQLGLGDTDD 149
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
P SV AAG H +VT+ G++Y WGW G G+
Sbjct: 150 SLVPHKLLAFEGVSVKMLAAGAEHTAAVTDGGKLYGWGW-------------GRYGNLGL 196
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTL 201
G + LP E D++ R T + + + GD L
Sbjct: 197 GDRGDR-MLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHL 255
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
P V IT+V+ G RHT+ L++ G+++GWG+ GQ+G G + +P LI
Sbjct: 256 LPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGD-VDDHTSPQLISI 314
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G+ R V +++CG RH+ VTD + ++G G GQ
Sbjct: 315 ---------------------PGQHQR--VVQVSCGWRHTVAVTDKNNVYSWGRGTSGQ 350
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 87/225 (38%), Gaps = 44/225 (19%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGK 156
E S+V A S T +Y+WGW DFG G F
Sbjct: 58 EISLVACGADHTTAYSATRL-TIYSWGWG----------DFGRLGHGNSSDLFVPHPIKA 106
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
L Q D S R ++ GD +L P + GV +
Sbjct: 107 LQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKM 166
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAASGKDRPLLV 275
+AAG HT ++D G+++GWG+G G LGLG R +M+P E A G ++ +V
Sbjct: 167 LAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRMLPA-------EVPAVGDEKMCMV 219
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
ACG RH+ V+ +G L T+GW YGQ
Sbjct: 220 -------------------ACGWRHTIAVSQSGKLYTYGWSKYGQ 245
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 66/202 (32%)
Query: 55 VCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEASVVKAA 110
+C CG+ +A S+SGKL T+G + GQ L G + + P E ++ + +
Sbjct: 216 MCMVACGWRHTIAVSQSGKLYTYGWSK-YGQ--LGHGDYADHLLPHQVAALAEFNITQVS 272
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
GW H V++TEAG++Y WGW + FG GS
Sbjct: 273 GGWRHTVALTEAGKLYGWGWNK----------FGQVGS---------------------- 300
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV--KITKVAAGGRHTLILS 228
GD SP L+++ PG ++ +V+ G RHT+ ++
Sbjct: 301 ------------------------GDVDDHTSPQLISI-PGQHQRVVQVSCGWRHTVAVT 335
Query: 229 DMGQVWGWGYGGEGQLGLGSRI 250
D V+ WG G GQLG G +
Sbjct: 336 DKNNVYSWGRGTSGQLGHGDAV 357
>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
Length = 1057
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 76/292 (26%), Positives = 111/292 (38%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG DS G+ L +E+ V
Sbjct: 97 LALNDKGQVYAWGL---------------------DSDGQLGLLGSEECI--------RV 127
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ K+ S ++I +VA G H+L LS +V+ W
Sbjct: 128 PRNIKSLS--------------------------DIQIVQVACGYYHSLALSKASEVFCW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG K +P L IP ++ AA G +L G++ N G+
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 286 AGRS-----YVKE------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + YV I CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 69/279 (24%), Positives = 107/279 (38%), Gaps = 47/279 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS--------ALPT 162
G+ H +++++A EV+ WG + +G G D + S +P
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK----------YGQLG-LGIDCKKQASPQLIKSLLGIPF 192
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + R + DE P L+ KI + G
Sbjct: 193 MQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGED 252
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
HT L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI-- 295
Query: 283 SGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V +G + +FG G GQ
Sbjct: 296 --------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|410960604|ref|XP_003986879.1| PREDICTED: RCC1 domain-containing protein 1 [Felis catus]
Length = 320
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 82/189 (43%), Gaps = 24/189 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASV--VKAAAGWAHC 116
G AL E+G++ +WG L G EP PL V + AAG H
Sbjct: 111 GAEHALLLDEAGQVFSWGQGR---HGQLGHGTLEAELEPRPLEALQGVPMAEVAAGGWHS 167
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
V V+E G++Y WGW E A +R G K + G+ S L K G +V
Sbjct: 168 VCVSETGDIYIWGWNESGQLALPSRSLAEVG---KTAAGEASGL---------KEDGCDV 215
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+T+ P + F P L+ L PG K + G RHT +++ G+++ W
Sbjct: 216 ----RTAEGESGGLAPFIAIQPF---PALLDLPPGTDAVKASCGSRHTAVVTRTGELYTW 268
Query: 237 GYGGEGQLG 245
G+G GQLG
Sbjct: 269 GWGKYGQLG 277
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 64/137 (46%), Gaps = 22/137 (16%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P + GV + +VAAGG H++ +S+ G ++ WG+ GQL L SR +
Sbjct: 144 LEPRPLEALQGVPMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPSRSLA----EVGK 199
Query: 261 CLEHAASG-KDRPLLVRQGSVNSSGKA----------------GRSYVKEIACGGRHSAV 303
ASG K+ VR S G A G VK +CG RH+AV
Sbjct: 200 TAAGEASGLKEDGCDVRTAEGESGGLAPFIAIQPFPALLDLPPGTDAVK-ASCGSRHTAV 258
Query: 304 VTDAGALLTFGWGLYGQ 320
VT G L T+GWG YGQ
Sbjct: 259 VTRTGELYTWGWGKYGQ 275
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 25/118 (21%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L P ++ ++ G H L+L + GQV+ WG G GQLG G+ L
Sbjct: 94 PFYSPLAPELRARRLELGAEHALLLDEAGQVFSWGQGRHGQLGHGT-------------L 140
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
E A + RPL QG + E+A GG HS V++ G + +GW GQ
Sbjct: 141 E--AELEPRPLEALQGVP----------MAEVAAGGWHSVCVSETGDIYIWGWNESGQ 186
>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
Length = 1057
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 78/306 (25%), Positives = 123/306 (40%), Gaps = 63/306 (20%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + S G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIVQVSCGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFSWGQNKYGQLGLGIDCKKQT------------SPQLIKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRH-SAVVTDAGALLTFG 314
G V + G G S V +IACG +H SA V +G + +FG
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFG 320
Query: 315 WGLYGQ 320
G GQ
Sbjct: 321 LGGNGQ 326
>gi|225451993|ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
gi|296087299|emb|CBI33673.3| unnamed protein product [Vitis vinifera]
Length = 395
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 117/324 (36%), Gaps = 84/324 (25%)
Query: 53 KDVCG--GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
++VC G +LA E GKL TWG + K P A +V+AA
Sbjct: 39 QNVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALANAKIVQAA 98
Query: 111 AGWAHCVSVTEAGEVYTWG---WRECVPSAKVTRDFGSAGSFQKDST------------- 154
G HC++V + G Y WG + +C + D G ++D T
Sbjct: 99 IGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGR--PLRRDITIPQRCASKLSVRQ 156
Query: 155 ----GKQSALPTEQA---------PPSDKRAGEEVVKRRKTSSAR--------------- 186
G S + T + PP D + V+ + R
Sbjct: 157 VAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISTPVRVQGLEKVRLIAVGAFHNLALLED 216
Query: 187 --------EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
E +GD P V + + +AAGG H+ L+D G V+GWG
Sbjct: 217 GILWAWGNNEYGQLGTGDTQPRSQPIAVQGLSDLTLVDIAAGGWHSTALTDDGGVYGWGR 276
Query: 239 GGEGQLGLGS--RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G G+LG G KMVP + LLV + V +I+C
Sbjct: 277 GEHGRLGFGDDKSSKMVP--------------QKVQLLVEENIV------------QISC 310
Query: 297 GGRHSAVVTDAGALLTFGWGLYGQ 320
GG HS +T G + +FG G +G+
Sbjct: 311 GGTHSVALTRDGRMFSFGRGDHGR 334
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 12/111 (10%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
D+ + P V L I +++ GG H++ L+ G+++ +G G G+LG G ++
Sbjct: 287 DKSSKMVPQKVQLLVEENIVQISCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKV-TTGH 345
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P +P A+ +++ SG G K +ACGGRH+ + +
Sbjct: 346 PMEVPINLPPAT-----------NLSGSGAGGHWCSKLVACGGRHTLAIVE 385
>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 545
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 125/317 (39%), Gaps = 63/317 (19%)
Query: 22 VYMWGY-------LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
VY WG L TS + P+ PI A L + CG G L +E G++ T
Sbjct: 3 VYSWGRGEDGQLGLGDTSDQHRPV--PIDA-LAERRIVQIACGSGHTVVL--TEEGEVYT 57
Query: 75 WGSADDEGQSYLTSGKHG--ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
WG DD L G +G P ++ + G H +VT +G++YTWG
Sbjct: 58 WGRGDD---GRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGM 114
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA------GEEVVKRRKTSSAR 186
+G G + TG + E R V+ K
Sbjct: 115 ----------YGKLG--HGNETGHSTPYLVETLKSMQVRQVACGSRHTVVLLENKDVYTW 162
Query: 187 EESENPASGD---EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
+ EN SG E PC V G I +++A G HT LS+ G+V+ +G G G+
Sbjct: 163 GDKENGVSGHGDTEGHQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGR 222
Query: 244 LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
LG S + P + L AG+ VK++ACGG H+A
Sbjct: 223 LGHNSE-RNQPVARFVDAL-----------------------AGKR-VKQVACGGFHTAA 257
Query: 304 VTDAGALLTFGWGLYGQ 320
VT+ G + T+G G +GQ
Sbjct: 258 VTETGEVYTWGGGEHGQ 274
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 112/275 (40%), Gaps = 67/275 (24%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVT 120
A + SG L TWG G Y G ET P E V + A G H V +
Sbjct: 100 AVTVSGDLYTWG-----GGMYGKLGHGNETGHSTPYLVETLKSMQVRQVACGSRHTVVLL 154
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
E +VYTWG +E + S D+ G Q LP P ++ G+ +V+
Sbjct: 155 ENKDVYTWGDKE------------NGVSGHGDTEGHQY-LPC----PVEELRGKSIVQIS 197
Query: 181 ----KTSSAREESENPASGD-EFFTL-------SPC--LVTLNPGVKITKVAAGGRHTLI 226
T++ E E G+ +F L P V G ++ +VA GG HT
Sbjct: 198 ACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVARFVDALAGKRVKQVACGGFHTAA 257
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
+++ G+V+ WG G GQLG G ++ K VPT + LL
Sbjct: 258 VTETGEVYTWGGGEHGQLGHGDKVNKTVPT-------------RVESLL----------- 293
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V +I CG H+ +TD G + T+G G +G+
Sbjct: 294 --EKLVLQITCGWSHTVTLTDTGEVYTWGNGDHGK 326
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQS 84
+G L S P+ + A G K V GG A A +E+G++ TWG + GQ
Sbjct: 220 FGRLGHNSERNQPVARFVDA--LAGKRVKQVACGGFHTA-AVTETGEVYTWGGGE-HGQL 275
Query: 85 YLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ P E V++ GW+H V++T+ GEVYTWG
Sbjct: 276 GHGDKVNKTVPTRVESLLEKLVLQITCGWSHTVTLTDTGEVYTWG 320
>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
garnettii]
Length = 1049
Score = 67.8 bits (164), Expect = 7e-09, Method: Composition-based stats.
Identities = 76/292 (26%), Positives = 111/292 (38%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG DS G+ L +E+ V
Sbjct: 97 LALNDKGQVYAWGL---------------------DSDGQLGLLGSEECI--------RV 127
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ K+ S ++I +VA G H+L LS +V+ W
Sbjct: 128 PRNIKSLS--------------------------DIQIVQVACGYYHSLALSKASEVFCW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG K +P L IP ++ AA G +L G++ N G+
Sbjct: 162 GQNKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 286 AGRS-----YVKE------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + YV I CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 70/278 (25%), Positives = 107/278 (38%), Gaps = 45/278 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ--KDSTGKQ-----SALPTE 163
G+ H +++++A EV+ WG + +G G K T Q +P
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK----------YGQLGLGLDCKKQTSPQLIKSLVGIPFM 193
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
Q + + R + DE P L+ KI + G H
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
T L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI--- 295
Query: 284 GKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V +G + +FG G GQ
Sbjct: 296 -------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|281209109|gb|EFA83284.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 853
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 126/328 (38%), Gaps = 83/328 (25%)
Query: 39 LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
L P +L G K + G +LA +E G + +WG GK GE P
Sbjct: 23 LDPAVIQLLKGKRIKQIACGE-AHSLAVTEFGDVYSWGR-----------GKEGELGHPQ 70
Query: 99 PLPT----------EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKV--------- 139
T +VK A G H +++T+ G+VY WG + + K
Sbjct: 71 KAMTAPPALIKALEHERIVKVACGNYHSLALTDTGKVYQWGQLHEIDATKSGVKSQGGLV 130
Query: 140 ----TRDFGSA---GSFQKDSTGKQSALPTEQAPPS-------------DKRAGEEVVKR 179
+ F S S G+++A E A S D + EE
Sbjct: 131 EMTGIKSFASKVADHSLSMYLNGEKAAYDEESASSSVLQDNPTANGLVTDDQEEEEEFLP 190
Query: 180 RKTSSAREESENPASGDEF------FTLSPCLVTL-NPGVKITKVAAGGRHTLILSDMGQ 232
++E + SG + ++P LV + +KI ++AG ++ ++ G
Sbjct: 191 EAIVDTQQEQQPEKSGSKVGEIVDKNQMTPVLVDFGSKSIKIVDISAGWAYSAAVTSTGN 250
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
V+ WG+ +GQLGLG R H P ++R S S +
Sbjct: 251 VYTWGFNEKGQLGLGDR------------WYHG-----NPRVIRSLSNKS--------IV 285
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQ 320
IACG +H A ++ +G L T+G G++GQ
Sbjct: 286 NIACGRQHMAAISKSGDLYTWGLGVFGQ 313
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 104/257 (40%), Gaps = 22/257 (8%)
Query: 39 LSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
++P+ G S K V G ++ A + +G + TWG +++GQ L + P
Sbjct: 218 MTPVLVDF-GSKSIKIVDISAGWAYSAAVTSTGNVYTWG-FNEKGQLGLGDRWYHGNPRV 275
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSA 146
+ S+V A G H +++++G++YTWG + + KV
Sbjct: 276 IRSLSNKSIVNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKSLLHPKKVLYFEQQQ 335
Query: 147 GSFQKDSTGKQSALP-TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS-PC 204
+ +TG + +E GE + + N D+ S P
Sbjct: 336 KKIVQVATGANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPK 395
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-- 262
V VK+ KVA G HT+ ++ V+ WG+G G LG G R K P +P L
Sbjct: 396 QVKALESVKVRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGFGDR-KFQLVPQRVPSLSG 454
Query: 263 EHAAS---GKDRPLLVR 276
E +S G+ L+VR
Sbjct: 455 EEISSVSGGEKHTLIVR 471
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 23/126 (18%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GD ++ +P ++ I +A G +H +S G ++ WG G GQLG G ++K +
Sbjct: 265 GDRWYHGNPRVIRSLSNKSIVNIACGRQHMAAISKSGDLYTWGLGVFGQLGHG-KLKSLL 323
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
P + E + + ++A G + V++ G L +FG
Sbjct: 324 HPKKVLYFEQQ----------------------QKKIVQVATGANFTMAVSENGELFSFG 361
Query: 315 WGLYGQ 320
G YGQ
Sbjct: 362 HGEYGQ 367
>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Ailuropoda melanoleuca]
gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
Length = 1057
Score = 67.8 bits (164), Expect = 7e-09, Method: Composition-based stats.
Identities = 76/292 (26%), Positives = 111/292 (38%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG DS G+ L +E+ V
Sbjct: 97 LALNDKGQVYAWGL---------------------DSDGQLGLLGSEECI--------RV 127
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ K+ S ++I +VA G H+L LS +V+ W
Sbjct: 128 PRNIKSLS--------------------------DIQIVQVACGYYHSLALSKASEVFCW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG K +P L IP ++ AA G +L G++ N G+
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 286 AGRS-----YVKE------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + YV I CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 57.4 bits (137), Expect = 9e-06, Method: Composition-based stats.
Identities = 69/279 (24%), Positives = 107/279 (38%), Gaps = 47/279 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS--------ALPT 162
G+ H +++++A EV+ WG + +G G D + S +P
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK----------YGQLG-LGIDCKKQASPQLIKSLLGIPF 192
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + R + DE P L+ KI + G
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGED 252
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
HT L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI-- 295
Query: 283 SGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V +G + +FG G GQ
Sbjct: 296 --------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Canis lupus familiaris]
Length = 1054
Score = 67.8 bits (164), Expect = 7e-09, Method: Composition-based stats.
Identities = 75/292 (25%), Positives = 110/292 (37%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG DS G+ L +E+ +
Sbjct: 97 LALNDKGQVYAWGL---------------------DSDGQLGLLGSEEC----------I 125
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
R S + ++I +VA G H+L LS G+ + W
Sbjct: 126 RVPRNIKSLSD------------------------IQIVQVACGYYHSLALSKEGEFFCW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG K +P L IP ++ AA G +L G++ N G+
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 286 AGRS-----YVKE------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + YV I CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
Length = 1042
Score = 67.8 bits (164), Expect = 7e-09, Method: Composition-based stats.
Identities = 75/299 (25%), Positives = 107/299 (35%), Gaps = 91/299 (30%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEG 82
+G L P K P L + G D++ + CG +LA S G++ +WGS D+ G
Sbjct: 63 YGQLGHDQPRKRPQL------VSGLDAYS-IINVACGEMHSLALSRWGEVFSWGS-DNYG 114
Query: 83 Q-SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTR 141
Q + G P+ + VV+ AAG H V++T AGE++ WG
Sbjct: 115 QLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWG----------AN 164
Query: 142 DFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL 201
DFG G + P E P +
Sbjct: 165 DFG--------QLGLGTITPYESTPTT--------------------------------- 183
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
V G+ +A G HT +S G V+GWG GQLGL +
Sbjct: 184 ----VCSLSGIPFALIACGANHTFAVSKSGAVFGWGKNINGQLGLNDTVS---------- 229
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
K P +R S V+ I+CG S +T G + + G G+YGQ
Sbjct: 230 -------KKFPTQLR--------TLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQ 273
Score = 42.4 bits (98), Expect = 0.34, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 55/136 (40%), Gaps = 32/136 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASG 268
+ K A G HTL L+ G+V+ G GQLG K P L+ L+ + A G
Sbjct: 36 VMKAALGANHTLFLTKDGKVYSCGSNDYGQLGHDQPRK---RPQLVSGLDAYSIINVACG 92
Query: 269 KDRPL-LVRQGSVNSSG-----------------------KAGRSYVKEIACGGRHSAVV 304
+ L L R G V S G + V +IA G RHS +
Sbjct: 93 EMHSLALSRWGEVFSWGSDNYGQLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVAL 152
Query: 305 TDAGALLTFGWGLYGQ 320
T+AG + +G +GQ
Sbjct: 153 TNAGEIFVWGANDFGQ 168
>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Gorilla gorilla gorilla]
Length = 1049
Score = 67.8 bits (164), Expect = 7e-09, Method: Composition-based stats.
Identities = 78/306 (25%), Positives = 124/306 (40%), Gaps = 63/306 (20%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRH-SAVVTDAGALLTFG 314
G V + G G S V EIACG +H SA V +G + +FG
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFG 320
Query: 315 WGLYGQ 320
G GQ
Sbjct: 321 LGGNGQ 326
>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Gorilla gorilla gorilla]
Length = 1057
Score = 67.8 bits (164), Expect = 7e-09, Method: Composition-based stats.
Identities = 78/306 (25%), Positives = 124/306 (40%), Gaps = 63/306 (20%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRH-SAVVTDAGALLTFG 314
G V + G G S V EIACG +H SA V +G + +FG
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFG 320
Query: 315 WGLYGQ 320
G GQ
Sbjct: 321 LGGNGQ 326
>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Canis lupus familiaris]
Length = 1057
Score = 67.8 bits (164), Expect = 7e-09, Method: Composition-based stats.
Identities = 76/292 (26%), Positives = 111/292 (38%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG DS G+ L +E+ V
Sbjct: 97 LALNDKGQVYAWGL---------------------DSDGQLGLLGSEECI--------RV 127
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ K+ S ++I +VA G H+L LS +V+ W
Sbjct: 128 PRNIKSLS--------------------------DIQIVQVACGYYHSLALSKASEVFCW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG K +P L IP ++ AA G +L G++ N G+
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 286 AGRS-----YVKE------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + YV I CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 57.4 bits (137), Expect = 9e-06, Method: Composition-based stats.
Identities = 69/279 (24%), Positives = 107/279 (38%), Gaps = 47/279 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS--------ALPT 162
G+ H +++++A EV+ WG + +G G D + S +P
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK----------YGQLG-LGIDCKKQASPQLIKSLLGIPF 192
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + R + DE P L+ KI + G
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGED 252
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
HT L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI-- 295
Query: 283 SGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V +G + +FG G GQ
Sbjct: 296 --------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Ailuropoda melanoleuca]
Length = 1049
Score = 67.8 bits (164), Expect = 7e-09, Method: Composition-based stats.
Identities = 76/292 (26%), Positives = 111/292 (38%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG DS G+ L +E+ V
Sbjct: 97 LALNDKGQVYAWGL---------------------DSDGQLGLLGSEECI--------RV 127
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ K+ S ++I +VA G H+L LS +V+ W
Sbjct: 128 PRNIKSLS--------------------------DIQIVQVACGYYHSLALSKASEVFCW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG K +P L IP ++ AA G +L G++ N G+
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 286 AGRS-----YVKE------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + YV I CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 57.4 bits (137), Expect = 9e-06, Method: Composition-based stats.
Identities = 69/279 (24%), Positives = 107/279 (38%), Gaps = 47/279 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS--------ALPT 162
G+ H +++++A EV+ WG + +G G D + S +P
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK----------YGQLG-LGIDCKKQASPQLIKSLLGIPF 192
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + R + DE P L+ KI + G
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGED 252
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
HT L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI-- 295
Query: 283 SGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V +G + +FG G GQ
Sbjct: 296 --------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
Length = 1057
Score = 67.8 bits (164), Expect = 7e-09, Method: Composition-based stats.
Identities = 76/292 (26%), Positives = 111/292 (38%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG DS G+ L +E+ V
Sbjct: 97 LALNDKGQVYAWGL---------------------DSDGQLGLLGSEECI--------RV 127
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ K+ S ++I +VA G H+L LS +V+ W
Sbjct: 128 PRNIKSLS--------------------------DIQIVQVACGYYHSLALSKASEVFCW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG K +P L IP ++ AA G +L G++ N G+
Sbjct: 162 GQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 286 AGRS-----YVKE------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + YV I CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 70/278 (25%), Positives = 107/278 (38%), Gaps = 45/278 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ--KDSTGKQ-----SALPTE 163
G+ H +++++A EV+ WG + +G G K T Q +P
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK----------YGQLGLGIDCKKQTSPQLIKSLLGIPFM 193
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
Q + + R + DE P L+ KI + G H
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
T L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI--- 295
Query: 284 GKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V +G + +FG G GQ
Sbjct: 296 -------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Canis lupus familiaris]
Length = 1049
Score = 67.8 bits (164), Expect = 8e-09, Method: Composition-based stats.
Identities = 76/292 (26%), Positives = 111/292 (38%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG DS G+ L +E+ V
Sbjct: 97 LALNDKGQVYAWGL---------------------DSDGQLGLLGSEECI--------RV 127
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ K+ S ++I +VA G H+L LS +V+ W
Sbjct: 128 PRNIKSLS--------------------------DIQIVQVACGYYHSLALSKASEVFCW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG K +P L IP ++ AA G +L G++ N G+
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 286 AGRS-----YVKE------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + YV I CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 57.4 bits (137), Expect = 9e-06, Method: Composition-based stats.
Identities = 69/279 (24%), Positives = 107/279 (38%), Gaps = 47/279 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS--------ALPT 162
G+ H +++++A EV+ WG + +G G D + S +P
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK----------YGQLG-LGIDCKKQASPQLIKSLLGIPF 192
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + R + DE P L+ KI + G
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGED 252
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
HT L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI-- 295
Query: 283 SGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V +G + +FG G GQ
Sbjct: 296 --------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
3 [Ailuropoda melanoleuca]
Length = 1054
Score = 67.8 bits (164), Expect = 8e-09, Method: Composition-based stats.
Identities = 75/292 (25%), Positives = 110/292 (37%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG DS G+ L +E+ +
Sbjct: 97 LALNDKGQVYAWGL---------------------DSDGQLGLLGSEEC----------I 125
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
R S + ++I +VA G H+L LS +V+ W
Sbjct: 126 RVPRNIKSLSD------------------------IQIVQVACGYYHSLALSKASEVFCW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG K +P L IP ++ AA G +L G++ N G+
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 286 AGRS-----YVKE------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + YV I CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 57.4 bits (137), Expect = 9e-06, Method: Composition-based stats.
Identities = 69/279 (24%), Positives = 107/279 (38%), Gaps = 47/279 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS--------ALPT 162
G+ H +++++A EV+ WG + +G G D + S +P
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK----------YGQLG-LGIDCKKQASPQLIKSLLGIPF 192
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + R + DE P L+ KI + G
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGED 252
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
HT L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI-- 295
Query: 283 SGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V +G + +FG G GQ
Sbjct: 296 --------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Loxodonta africana]
Length = 1057
Score = 67.8 bits (164), Expect = 8e-09, Method: Composition-based stats.
Identities = 77/292 (26%), Positives = 110/292 (37%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG DS G+ L +E+
Sbjct: 97 LALNDKGQVYAWGL---------------------DSDGQLGLLGSEECIR--------- 126
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
V R S A ++I +VA G H+L LS +V+ W
Sbjct: 127 VPRNIKSLA-------------------------DIQIVQVACGYYHSLALSKASEVFCW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG K +P L IP ++ AA G +L G++ N G+
Sbjct: 162 GQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 286 AGRS-----YVKE------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + YV I CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 58.5 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 71/278 (25%), Positives = 110/278 (39%), Gaps = 45/278 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P + +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDSTGK--QSAL--PTE 163
G+ H +++++A EV+ WG + +G G +K ++ K +S L P
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK----------YGQLGLGLDCKKQASPKLLKSLLGIPFM 193
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
Q + + R + DE P L+ KI + G H
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
T L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI--- 295
Query: 284 GKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V +G + +FG G GQ
Sbjct: 296 -------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Loxodonta africana]
Length = 1049
Score = 67.8 bits (164), Expect = 8e-09, Method: Composition-based stats.
Identities = 77/292 (26%), Positives = 110/292 (37%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG DS G+ L +E+
Sbjct: 97 LALNDKGQVYAWGL---------------------DSDGQLGLLGSEECIR--------- 126
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
V R S A ++I +VA G H+L LS +V+ W
Sbjct: 127 VPRNIKSLA-------------------------DIQIVQVACGYYHSLALSKASEVFCW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG K +P L IP ++ AA G +L G++ N G+
Sbjct: 162 GQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 286 AGRS-----YVKE------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + YV I CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 58.5 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 71/278 (25%), Positives = 110/278 (39%), Gaps = 45/278 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P + +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDSTGK--QSAL--PTE 163
G+ H +++++A EV+ WG + +G G +K ++ K +S L P
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK----------YGQLGLGLDCKKQASPKLLKSLLGIPFM 193
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
Q + + R + DE P L+ KI + G H
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
T L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI--- 295
Query: 284 GKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V +G + +FG G GQ
Sbjct: 296 -------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
Length = 1049
Score = 67.8 bits (164), Expect = 8e-09, Method: Composition-based stats.
Identities = 76/292 (26%), Positives = 111/292 (38%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG DS G+ L +E+ V
Sbjct: 97 LALNDKGQVYAWGL---------------------DSDGQLGLLGSEECI--------RV 127
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ K+ S ++I +VA G H+L LS +V+ W
Sbjct: 128 PRNIKSLS--------------------------DIQIVQVACGYYHSLALSKASEVFCW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG K +P L IP ++ AA G +L G++ N G+
Sbjct: 162 GQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 286 AGRS-----YVKE------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + YV I CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 58.2 bits (139), Expect = 6e-06, Method: Composition-based stats.
Identities = 70/278 (25%), Positives = 107/278 (38%), Gaps = 45/278 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ--KDSTGKQ-----SALPTE 163
G+ H +++++A EV+ WG + +G G K T Q +P
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK----------YGQLGLGIDCKKQTSPQLIKSLLGIPFM 193
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
Q + + R + DE P L+ KI + G H
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
T L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI--- 295
Query: 284 GKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V +G + +FG G GQ
Sbjct: 296 -------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
Length = 527
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 101/238 (42%), Gaps = 42/238 (17%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL K C G G LAT+E G++ TWG G + L +G P
Sbjct: 65 PRRLDSLSDKKIACLSYGSGPHIILATTE-GEVFTWGH---NGYTQLGNGTTNHGLVPCQ 120
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEVY WG+ ++G ST
Sbjct: 121 VSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWGYN-------------NSGQVGSGSTAN 167
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--------------ASGDEFFTLS 202
Q A+P + + + S A ++ +SG++ +
Sbjct: 168 Q-AIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGSSGNQ---PT 223
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
PC V G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP ++
Sbjct: 224 PCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVV 281
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 29/149 (19%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC V+ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS +
Sbjct: 116 LVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGSTANQAIPRRVT 175
Query: 260 PCLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------YV 291
CL+ + A G+ + +V G V N +G+ G V
Sbjct: 176 GCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRV 235
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +ACG H+ V+TD G + +G YGQ
Sbjct: 236 QRVACGFAHTLVLTDEGQVYAWGANSYGQ 264
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 58/128 (45%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD TL P + KI ++ G G H ++ + G+V+ WG+ G QLG G+
Sbjct: 57 GDVQSTLEPRRLDSLSDKKIACLSYGSGPHIILATTEGEVFTWGHNGYTQLGNGT----- 111
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC Q S N S K V E+ACG HS V+T G +
Sbjct: 112 -TNHGLVPC---------------QVSTNLSNKQ----VIEVACGSYHSLVLTSDGEVYA 151
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 152 WGYNNSGQ 159
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S IP R+ G K V CG ++A ++G++ WG
Sbjct: 149 VYAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWG 258
>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 441
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 106/275 (38%), Gaps = 55/275 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVKAAAG 112
G ++A L TWG +D GQ HG+ + +PT S + G
Sbjct: 22 GASHSVALLAGNVLCTWGRGED-GQL-----GHGDAEDRL-VPTVISGFDAPGITSVICG 74
Query: 113 WAHCVSVTE-AGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQA 165
H + +E +VY+WGW DFG G F + +Q
Sbjct: 75 ADHTTAYSEDEHQVYSWGWG----------DFGRLGHGNSTDVFTPQPVKALQGIKIKQL 124
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
D + S R ++ G +L P + G+ + +AAG HT
Sbjct: 125 ACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTA 184
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
+++ G ++GWG+G G LGLG R P + +E D+ +LV
Sbjct: 185 AVTEDGDIYGWGWGRYGNLGLGDRNDRF-VPEKVSSVE-----GDKMVLV---------- 228
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
ACG RH+ V+ +G+L T+GW YGQ
Sbjct: 229 ---------ACGWRHTITVSSSGSLYTYGWSKYGQ 254
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 95/238 (39%), Gaps = 51/238 (21%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKD 152
TP+P + + A G +HC++VT AGEV +WG + G G +D
Sbjct: 109 TPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQN----------GQLGLGTTED 158
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLS 202
S Q+ E AG E T++ E+ + N GD
Sbjct: 159 SLLPQTIQAFEGISVKMIAAGAE-----HTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFV 213
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P V+ G K+ VA G RHT+ +S G ++ +G+ GQLG G + PH + L
Sbjct: 214 PEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHL-VPHKVEAL 272
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +++ +I+ G RH+ +T G L +GW +GQ
Sbjct: 273 KDSST------------------------SQISGGWRHTMALTSDGKLYGWGWNKFGQ 306
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 78/208 (37%), Gaps = 26/208 (12%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G + WG G L PE +V A GW H ++V+ +G
Sbjct: 185 AVTEDGDIYGWGWGR-YGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGS 243
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + +P + D + R T +
Sbjct: 244 LYTYGWSK----------YGQLGH----GDFEDHLVPHKVEALKDSSTSQISGGWRHTMA 289
Query: 185 AREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+ + +GD SP V K+ +VA G RHTL ++ V+
Sbjct: 290 LTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTLAFTEKKNVF 349
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
WG G GQLG G + TP +I L
Sbjct: 350 AWGRGTSGQLGHGEIVDR-NTPVIIDAL 376
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Query: 50 DSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
DS GG +A + GKL WG + GQ +P P E V +
Sbjct: 274 DSSTSQISGGWRHTMALTSDGKLYGWG-WNKFGQVGAGDNADHCSPAQVNFPEEQKVAQV 332
Query: 110 AAGWAHCVSVTEAGEVYTWG 129
A GW H ++ TE V+ WG
Sbjct: 333 ACGWRHTLAFTEKKNVFAWG 352
>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 545
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 125/321 (38%), Gaps = 71/321 (22%)
Query: 22 VYMWGY-------LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
VY WG L TS + PIL L + + CG G L ++ GK+ T
Sbjct: 3 VYTWGRGEDGQLGLGDTSDQYHPILVE---ALQDRQTVQISCGSGHTVVL--TDDGKVYT 57
Query: 75 WGSADDEGQSYLTSGKHG--ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
WG DD L G +G P + V + G H +VT +GE+YTWG
Sbjct: 58 WGRGDD---GRLGHGDNGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWG--- 111
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK--RAGEEVVKRRKTSSARE--- 187
G + K G ++ T S K + R T E
Sbjct: 112 -------------GGMYGKLGHGNENGHSTPSLVESIKGLYVRQVACGSRHTVVLLENQD 158
Query: 188 -----ESENPASGD---EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+ EN SG SP V+ + I +++A G HT LS+ GQV+ +G G
Sbjct: 159 VYTWGDKENGVSGHGDTSGHQYSPYCVSELVEINIKQISACGFHTAALSENGQVFTFGEG 218
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G+LG S + P I L GK +K++ACGG
Sbjct: 219 KFGRLGHNSE-RNQPVAKCIDAL--------------------IGKR----IKQVACGGF 253
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
H+A VT++G + T+G G +GQ
Sbjct: 254 HTAAVTESGHVFTWGGGEHGQ 274
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 107/272 (39%), Gaps = 61/272 (22%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVT 120
A + SG+L TWG G Y G E P E+ V + A G H V +
Sbjct: 100 AVTVSGELYTWG-----GGMYGKLGHGNENGHSTPSLVESIKGLYVRQVACGSRHTVVLL 154
Query: 121 EAGEVYTWGWRECVPSAK-----------VTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
E +VYTWG +E S + Q + G +A +E
Sbjct: 155 ENQDVYTWGDKENGVSGHGDTSGHQYSPYCVSELVEINIKQISACGFHTAALSENGQVF- 213
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
GE R +S R + ++ C+ L G +I +VA GG HT +++
Sbjct: 214 -TFGEGKFGRLGHNSERNQP-----------VAKCIDAL-IGKRIKQVACGGFHTAAVTE 260
Query: 230 MGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
G V+ WG G GQLG G ++ +++PT S D+ ++
Sbjct: 261 SGHVFTWGGGEHGQLGHGDKVNQIIPTR--------VESLIDKNII-------------- 298
Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
++ CG H+ +TD G + T+G G +G+
Sbjct: 299 ----QLTCGWSHTVALTDKGEVFTWGNGDHGK 326
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQS 84
+G L S P+ I A + G K V GG A A +ESG + TWG + GQ
Sbjct: 220 FGRLGHNSERNQPVAKCIDALI--GKRIKQVACGGFHTA-AVTESGHVFTWGGGE-HGQL 275
Query: 85 YLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ P + ++++ GW+H V++T+ GEV+TWG
Sbjct: 276 GHGDKVNQIIPTRVESLIDKNIIQLTCGWSHTVALTDKGEVFTWG 320
>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
Length = 1057
Score = 67.4 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 78/306 (25%), Positives = 124/306 (40%), Gaps = 63/306 (20%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRH-SAVVTDAGALLTFG 314
G V + G G S V EIACG +H SA V +G + +FG
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFG 320
Query: 315 WGLYGQ 320
G GQ
Sbjct: 321 LGGNGQ 326
>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
Length = 1049
Score = 67.4 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 78/306 (25%), Positives = 124/306 (40%), Gaps = 63/306 (20%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRH-SAVVTDAGALLTFG 314
G V + G G S V EIACG +H SA V +G + +FG
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFG 320
Query: 315 WGLYGQ 320
G GQ
Sbjct: 321 LGGNGQ 326
>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 106/275 (38%), Gaps = 55/275 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVKAAAG 112
G ++A L TWG +D GQ HG+ + +PT S + G
Sbjct: 22 GASHSVALLAGNVLCTWGRGED-GQL-----GHGDAEDRL-VPTVISGFDAPGITSVICG 74
Query: 113 WAHCVSVTE-AGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQA 165
H + +E +VY+WGW DFG G F + +Q
Sbjct: 75 ADHTTAYSEDEHQVYSWGWG----------DFGRLGHGNSTDVFTPQPVKALQGIKIKQL 124
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
D + S R ++ G +L P + G+ + +AAG HT
Sbjct: 125 ACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTA 184
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
+++ G ++GWG+G G LGLG R P + +E D+ +LV
Sbjct: 185 AVTEDGDIYGWGWGRYGNLGLGDRNDRF-VPEKVSSVE-----GDKMVLV---------- 228
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
ACG RH+ V+ +G+L T+GW YGQ
Sbjct: 229 ---------ACGWRHTITVSSSGSLYTYGWSKYGQ 254
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 94/237 (39%), Gaps = 49/237 (20%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
TP+P + + A G +HC++VT AGEV +WG + T + DS
Sbjct: 109 TPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTE---------DS 159
Query: 154 TGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSP 203
Q+ E AG E T++ E+ + N GD P
Sbjct: 160 LLPQTIQAFEGISVKMIAAGAE-----HTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVP 214
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
V+ G K+ VA G RHT+ +S G ++ +G+ GQLG G + PH + L+
Sbjct: 215 EKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHL-VPHKVEALK 273
Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+++ +I+ G RH+ +T G L +GW +GQ
Sbjct: 274 DSST------------------------SQISGGWRHTMALTSDGKLYGWGWNKFGQ 306
>gi|46250190|gb|AAH68656.1| MGC81035 protein [Xenopus laevis]
Length = 530
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 108/257 (42%), Gaps = 36/257 (14%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + + V+++G GT +S I+ LCG KD+ G L
Sbjct: 32 NEAIYTTQNNEVFVFGMNSSNCLGTGDNQSAIMPRRLDVLCG-KKIKDLSYGSGPHILLC 90
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
+E G++ +WG G S L +G + P + E V+K A G H +++T G
Sbjct: 91 NEDGEVYSWGH---NGYSQLGNGNTIQGTTPVQVCMELLSKKVIKVACGSHHSMALTSDG 147
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
EV++WG+ ++G +T QS +P + + + + + +S
Sbjct: 148 EVFSWGYN-------------NSGQVGSGTTANQS-VPRKVSSSLQSKVVVSIAAGQTSS 193
Query: 184 SAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
A ++ + G+ L PC + V I +V G H+L LSD G
Sbjct: 194 MAITDNGHVYGWGYNGTGQLGLGNTGNQLMPCRLVFAQPVCIIQVVLGYAHSLALSDQGV 253
Query: 233 VWGWGYGGEGQLGLGSR 249
++ WG GQLG+G++
Sbjct: 254 LYAWGANSHGQLGIGNK 270
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 25/128 (19%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD + P + + G KI ++ G G H L+ ++ G+V+ WG+ G QLG G+ I+
Sbjct: 56 TGDNQSAIMPRRLDVLCGKKIKDLSYGSGPHILLCNEDGEVYSWGHNGYSQLGNGNTIQ- 114
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T + C+E LL ++ V ++ACG HS +T G + +
Sbjct: 115 -GTTPVQVCME---------LLSKK-------------VIKVACGSHHSMALTSDGEVFS 151
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 152 WGYNNSGQ 159
>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
Length = 1050
Score = 67.4 bits (163), Expect = 1e-08, Method: Composition-based stats.
Identities = 69/266 (25%), Positives = 108/266 (40%), Gaps = 33/266 (12%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTEASVVKAAAGWAH 115
CG +LA S+ G+L +WG+ D GQ LT+ + T P + ++++ + G H
Sbjct: 90 ACGESHSLALSDQGQLFSWGAGSD-GQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWH 148
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
C+++ G+ +TWG + + ++ S S Q+ +P Q +
Sbjct: 149 CLALAADGQFFTWG-QNSYGQLGLGKECPSQASPQR--VKSLDGIPLAQVAAGGAHSFAL 205
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ + S DE SPC V L K+ ++ G HT +L+ G V+
Sbjct: 206 SLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
+G G GQLG S V R +L G S V +IA
Sbjct: 266 FGAGSCGQLGHDSMNDEV---------------NPRRVLELMG----------SEVSQIA 300
Query: 296 CGGRHS-AVVTDAGALLTFGWGLYGQ 320
CG H+ A V +G + FG G GQ
Sbjct: 301 CGRHHTLAFVPSSGMIYAFGCGTRGQ 326
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 46/110 (41%), Gaps = 24/110 (21%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G I VA G H+L LSD GQ++ WG G +GQLGL + V P LI
Sbjct: 83 GQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIK---------- 132
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
K + + +++CG H + G T+G YGQ
Sbjct: 133 --------------KLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQ 168
Score = 45.1 bits (105), Expect = 0.051, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 48/112 (42%), Gaps = 27/112 (24%)
Query: 236 WGYGGEGQLGLGSRIK-MVPTPHLIPCL------EHAASGKDRPLLVRQGSV-----NSS 283
WGY GQ G+GS I+ +VP P + + E A G L+ G V N+
Sbjct: 4 WGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 284 GKAGR---------------SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G+ G ++ +ACG HS ++D G L ++G G GQ
Sbjct: 64 GQLGHDCEGSKPEQIGALAGQHIVHVACGESHSLALSDQGQLFSWGAGSDGQ 115
>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 107/277 (38%), Gaps = 57/277 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA------- 111
G ++A L +WG +D GQ HG+ + +PT S AAA
Sbjct: 30 GASHSVALLAGNVLCSWGRGED-GQL-----GHGDAEDRL-VPTVLSGFDAAAPGITSVI 82
Query: 112 -GWAHCVSVTE-AGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTE 163
G H + +E +VY+WGW DFG G F + +
Sbjct: 83 CGADHTTAYSEDEQQVYSWGWG----------DFGRLGHGNSSDVFTPQPVKALQGIKIK 132
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
Q D + S R ++ G +L P + GV + +AAG H
Sbjct: 133 QIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEH 192
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
T +++ G ++GWG+G G LGLG R L+P + G+ L
Sbjct: 193 TAAVTEDGDLYGWGWGRYGNLGLGDR-----NDRLVPEKVSSVEGEKMVL---------- 237
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
IACG RH+ V+ +G+L T+GW YGQ
Sbjct: 238 ----------IACGWRHTITVSSSGSLYTYGWSKYGQ 264
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 95/238 (39%), Gaps = 51/238 (21%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKD 152
TP+P + + A G +HC++VT AGEV +WG + G G +D
Sbjct: 119 TPQPVKALQGIKIKQIACGDSHCLAVTMAGEVQSWGRNQN----------GQLGLGTTED 168
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLS 202
S Q E AG E T++ E+ + N GD L
Sbjct: 169 SLLPQKIQSFEGVCVKMIAAGAE-----HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLV 223
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P V+ G K+ +A G RHT+ +S G ++ +G+ GQLG G HL+P
Sbjct: 224 PEKVSSVEGEKMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGHGDF-----EDHLVPHK 278
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
A KD S + +I+ G RH+ +T G L +GW +GQ
Sbjct: 279 LEAL--KD------------------SSISQISGGWRHTMALTSDGKLYGWGWNKFGQ 316
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 73/205 (35%), Gaps = 60/205 (29%)
Query: 60 CGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG+ + S SG L T+G + GQ + P ++S+ + + GW H +
Sbjct: 240 CGWRHTITVSSSGSLYTYGWSK-YGQLGHGDFEDHLVPHKLEALKDSSISQISGGWRHTM 298
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++T G++Y WGW + FG G D P + P D+
Sbjct: 299 ALTSDGKLYGWGWNK----------FGQVGVGDTD----DHCFPVQVKFPEDQ------- 337
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
K+ +VA G RHTL ++ V+ WG
Sbjct: 338 -----------------------------------KVAQVACGWRHTLAFTEKKNVFSWG 362
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCL 262
G GQLG G + P +I L
Sbjct: 363 RGTSGQLGHGEIVDR-NKPVMIDAL 386
>gi|357520085|ref|XP_003630331.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524353|gb|AET04807.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 371
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 113/272 (41%), Gaps = 57/272 (20%)
Query: 63 ALATSESGKLI-TWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVKAAAGWAH 115
++ SG ++ +WG +D GQ HG+T + LPT+ S +V G +
Sbjct: 115 SIQNQVSGNVVCSWGRGED-GQL-----GHGDTDDRL-LPTKLSAFDGQDIVSVTCGADY 167
Query: 116 CVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPS 168
V+ +++G +VY+WGW DFG G F L +Q
Sbjct: 168 TVARSKSGKDVYSWGWG----------DFGRLGHGDPSDLFIPHPIRALQGLRIKQISCG 217
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
D ++ + S R ++ G + P + G++I VAAG H++ ++
Sbjct: 218 DCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAIT 277
Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
+ G ++GWG+G G LGLG LIP E D+ ++V
Sbjct: 278 EDGDLYGWGWGRYGNLGLGD-----TNDRLIP--EKVNIDGDKIVMV------------- 317
Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+CG RH+ ++ +G L T GW YGQ
Sbjct: 318 ------SCGWRHTISISSSGGLYTHGWSKYGQ 343
>gi|6957714|gb|AAF32458.1| hypothetical protein [Arabidopsis thaliana]
Length = 314
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 105/274 (38%), Gaps = 42/274 (15%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA + G + TWG + K P + +AA G HC++
Sbjct: 51 GSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLA 110
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
V + G Y WG R +P ++ D + + + G L E+
Sbjct: 111 VDDQGRAYAWGKR--MPFHTLS-DLLGLENVRLIAVGAFHNLALEE-------------D 154
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
R + E +GD T P V + + +AAGG H+ L+D G+V+GWG
Sbjct: 155 GRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGR 214
Query: 239 GGEGQLGLGSRI---KMVPTPHLIPCLE---------HAASGKDRPLLVRQ--------- 277
G G+LGLG KMVP + E H G R + Q
Sbjct: 215 GEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQFGRGDHGRLGYGRKVTTGQPLELPIKIP 274
Query: 278 ---GSVNSSG--KAGRSYVKEIACGGRHSAVVTD 306
GS N + + G+ K IACGGRH+ + +
Sbjct: 275 PPEGSFNHTDEEEEGKWSAKSIACGGRHTLAIVE 308
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 85/231 (36%), Gaps = 62/231 (26%)
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
E EP+ SV +G + +++ + G ++TWGW Q+
Sbjct: 38 EALEPY------SVRSVVSGSRNSLAICDDGTMFTWGWN------------------QRG 73
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTS-----SAREESENPASGDE--FFTLSPCL 205
+ G Q TE P K + + + ++ A G F TLS L
Sbjct: 74 TLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGKRMPFHTLSDLL 133
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
N + +A G H L L + G++ WG GQLG G PT H +P
Sbjct: 134 GLEN----VRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGD---TQPTSHPVPV---- 182
Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
G D LV +IA GG HS +TD G + +GWG
Sbjct: 183 -QGLDDLTLV-----------------DIAAGGWHSTALTDKGEV--YGWG 213
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 16/133 (12%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
C+V + V +G R++L + D G ++ WG+ G LG K P + L
Sbjct: 35 CVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALA 94
Query: 264 H-----AASGKDRPLLV-RQGSVNSSGK----------AGRSYVKEIACGGRHSAVVTDA 307
+ AA G L V QG + GK G V+ IA G H+ + +
Sbjct: 95 NVKITQAAIGGWHCLAVDDQGRAYAWGKRMPFHTLSDLLGLENVRLIAVGAFHNLALEED 154
Query: 308 GALLTFGWGLYGQ 320
G LL +G YGQ
Sbjct: 155 GRLLAWGNNEYGQ 167
>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
sativus]
Length = 438
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 101/269 (37%), Gaps = 43/269 (15%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G ++A + +WG +D GQ + +P +V G H +
Sbjct: 16 GASHSVALLSGNIVCSWGRGED-GQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTA 74
Query: 119 VTEA-GEVYTWGWRECVPSAKVTRDFGSAGSFQKDS------TGKQSALPTEQAPPSDKR 171
+ A EVY+WGW DFG G L Q D
Sbjct: 75 YSVARTEVYSWGWG----------DFGRLGHGNSSDLLTPKPIKALHGLKIRQIACGDSH 124
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
++ S R ++ G +L P + G+ I VAAG HT +++ G
Sbjct: 125 CLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDG 184
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
+++GWG+G G LGLG R L+P + G D+ ++V
Sbjct: 185 ELFGWGWGRYGNLGLGDR-----NDRLVPQKVSSVDG-DKMVMV---------------- 222
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
ACG RH+ V+ G L T+GW YGQ
Sbjct: 223 ---ACGWRHTISVSSLGGLYTYGWSKYGQ 248
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 98/250 (39%), Gaps = 55/250 (22%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKD 152
TP+P + + A G +HC++VT GEV +WG + G G +D
Sbjct: 103 TPKPIKALHGLKIRQIACGDSHCLAVTMEGEVQSWGRNQN----------GQLGLGTTED 152
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLS 202
S Q E AG E T++ E+ E N GD L
Sbjct: 153 SLVPQKIQAFEGISIKMVAAGAE-----HTAAVTEDGELFGWGWGRYGNLGLGDRNDRLV 207
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P V+ G K+ VA G RHT+ +S +G ++ +G+ GQLG G L+P
Sbjct: 208 PQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDF-----EDRLVPHR 262
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQRM 322
A G + + +I+ G RH+ +T G L +GW +GQ
Sbjct: 263 LEALRGDN--------------------ISQISGGWRHTMALTTDGKLYGWGWNKFGQ-- 300
Query: 323 AKCLAGDGIN 332
AGD I+
Sbjct: 301 --VGAGDNID 308
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 79/210 (37%), Gaps = 18/210 (8%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G A +E G+L WG G L P+ +V A GW H +S
Sbjct: 173 GAEHTAAVTEDGELFGWGWGR-YGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTIS 231
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
V+ G +YT+GW + +G G + L + + +G
Sbjct: 232 VSSLGGLYTYGWSK----------YGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHT 281
Query: 179 RRKTSSAR------EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
T+ + + +GD SP + K+ +++ G RHTL ++D
Sbjct: 282 MALTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQN 341
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
V+ WG G GQLG G + TP ++ L
Sbjct: 342 VFSWGRGTNGQLGHGESVDR-NTPMILEAL 370
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 42 IPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P RL GD+ + GG +A + GKL WG + GQ +P
Sbjct: 259 VPHRLEALRGDNISQISGG-WRHTMALTTDGKLYGWG-WNKFGQVGAGDNIDHCSPIQIK 316
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P + V++ + GW H ++VT+ V++WG
Sbjct: 317 FPQDQKVIQISCGWRHTLAVTDKQNVFSWG 346
>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
Length = 367
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 108/273 (39%), Gaps = 51/273 (18%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEASVVKAAAGWAHC 116
G ++A G + +WG +D GQ L G+ E P+ T+A + G +
Sbjct: 21 GSSHSVAILSCGIVTSWGRGED-GQ--LGHGQADECLAPKAISTLTDAGIESVVCGAEYT 77
Query: 117 VSVTEA-GEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPSD 169
++V + G+VY+WGW DFG G F S P + D
Sbjct: 78 IAVAPSRGQVYSWGW----------GDFGRLGHGDCNDVFVPRPIEFFSGRPVHRVACGD 127
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
+ + R ++ G LSP LV G ++ VA G H+L ++
Sbjct: 128 THTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSVACGSEHSLAATE 187
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
G V+ WG+G G LG G +DR L R G
Sbjct: 188 SGTVFSWGWGRYGNLGDGES-------------------QDRYLPTR--------VVGLE 220
Query: 290 YVKEIA--CGGRHSAVVTDAGALLTFGWGLYGQ 320
++ ++ CG RHSAVV++ G + TFGW YGQ
Sbjct: 221 GIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQ 253
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 101/267 (37%), Gaps = 49/267 (18%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
L + G+L T+G + GQ L +P+ V A G H ++ TE+G
Sbjct: 131 LVVAGEGELFTFGR-NQNGQLGLGHTNDCLSPQLVVALQGERVRSVACGSEHSLAATESG 189
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
V++WGW +G+ G D + LPT R R ++
Sbjct: 190 TVFSWGWGR----------YGNLG----DGESQDRYLPTRVVGLEGIRMVSAECGWRHSA 235
Query: 184 SAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
E+ GD PC V +I+ VA G RHT+ G +
Sbjct: 236 VVSEDGRVFTFGWSKYGQLGHGDHTDRTVPCQVAALRHTRISSVAGGWRHTMAADSSGNL 295
Query: 234 WGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
+GWG+ GQLGLG +S + P+LV G V
Sbjct: 296 YGWGWNKFGQLGLGD-----------------SSDRPSPVLV-------GGALAGQRVSL 331
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ CG RH+ VT+ G + ++G G+ GQ
Sbjct: 332 VTCGWRHTVAVTEGGRVYSWGRGVNGQ 358
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 86/207 (41%), Gaps = 38/207 (18%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA------SVVKAAAGWAHC 116
+LA +ESG + +WG Y G GE+ + + LPT +V A GW H
Sbjct: 182 SLAATESGTVFSWGWG-----RYGNLGD-GESQDRY-LPTRVVGLEGIRMVSAECGWRHS 234
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
V+E G V+T+GW + +G G D T + +P + A R
Sbjct: 235 AVVSEDGRVFTFGWSK----------YGQLG--HGDHTDR--TVPCQVAALRHTRISSVA 280
Query: 177 VKRRKTSSAREESE----------NPASGDEFFTLSPCLVT-LNPGVKITKVAAGGRHTL 225
R T +A GD SP LV G +++ V G RHT+
Sbjct: 281 GGWRHTMAADSSGNLYGWGWNKFGQLGLGDSSDRPSPVLVGGALAGQRVSLVTCGWRHTV 340
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+++ G+V+ WG G GQLG G+ +
Sbjct: 341 AVTEGGRVYSWGRGVNGQLGHGAEQDL 367
>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 279
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 110/275 (40%), Gaps = 56/275 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVKAAAG 112
G +A + +WG +D GQ HG+T + LPT+ S +V G
Sbjct: 20 GASHTVALLTGNVVCSWGRGED-GQL-----GHGDTDDRL-LPTKLSAFDGQDIVSVTCG 72
Query: 113 WAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQA 165
+ V+ +++G +VY+WGW DFG G F L +Q
Sbjct: 73 ADYTVARSKSGKDVYSWGWG----------DFGRLGHGDPSDLFIPHPIRALQGLRIKQI 122
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
D ++ + S R ++ G + P + G++I VAAG H++
Sbjct: 123 SCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSV 182
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
+++ G ++GWG+G G LGLG LIP VN G
Sbjct: 183 AITEDGDLYGWGWGRYGNLGLGD-----TNDRLIP-----------------EKVNIDGD 220
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ ++CG RH+ ++ +G L T GW YGQ
Sbjct: 221 K----IVMVSCGWRHTISISSSGGLYTHGWSKYGQ 251
>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
Length = 545
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 125/317 (39%), Gaps = 63/317 (19%)
Query: 22 VYMWGY-------LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
VY WG L TS + P+ PI A L + CG G L ++ G++ T
Sbjct: 3 VYSWGRGEDGQLGLGDTSDQHRPV--PIDA-LAERRIVQIACGSGHTVVL--TDEGEVYT 57
Query: 75 WGSADDEGQSYLTSGKHG--ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
WG DD L G +G P ++ + G H +VT +G++YTWG
Sbjct: 58 WGRGDD---GRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGM 114
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA------GEEVVKRRKTSSAR 186
+G G + TG + E R V+ K
Sbjct: 115 ----------YGKLG--HGNETGHSTPFLVETLKGMQVRQVACGSRHTVVLLENKDVYTW 162
Query: 187 EESENPASGD---EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
+ EN SG E PC V G I +++A G HT LS+ G+V+ +G G G+
Sbjct: 163 GDKENGVSGHGDTEGHQYLPCPVEELRGKNIVQISACGFHTAALSEFGEVFTFGEGKFGR 222
Query: 244 LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
LG S + P + L AG+ VK++ACGG H+A
Sbjct: 223 LGHNSE-RNQPVARFVEAL-----------------------AGKR-VKQVACGGFHTAA 257
Query: 304 VTDAGALLTFGWGLYGQ 320
VT+ G + T+G G +GQ
Sbjct: 258 VTETGEVYTWGGGEHGQ 274
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 110/275 (40%), Gaps = 67/275 (24%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVT 120
A + SG L TWG G Y G ET P E V + A G H V +
Sbjct: 100 AVTVSGDLYTWG-----GGMYGKLGHGNETGHSTPFLVETLKGMQVRQVACGSRHTVVLL 154
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
E +VYTWG +E + S D+ G Q LP P ++ G+ +V+
Sbjct: 155 ENKDVYTWGDKE------------NGVSGHGDTEGHQY-LPC----PVEELRGKNIVQIS 197
Query: 181 ----KTSSAREESENPASGDEFF--------TLSPC--LVTLNPGVKITKVAAGGRHTLI 226
T++ E E G+ F P V G ++ +VA GG HT
Sbjct: 198 ACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVARFVEALAGKRVKQVACGGFHTAA 257
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
+++ G+V+ WG G GQLG G ++ K VPT + L+
Sbjct: 258 VTETGEVYTWGGGEHGQLGHGDKVNKTVPT-------------RVESLV----------- 293
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V +I CG H+ +TD G + T+G G +G+
Sbjct: 294 --EKLVVQITCGWSHTVALTDTGEVYTWGNGDHGK 326
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQS 84
+G L S P+ + A G K V GG A A +E+G++ TWG + GQ
Sbjct: 220 FGRLGHNSERNQPVARFVEA--LAGKRVKQVACGGFHTA-AVTETGEVYTWGGGE-HGQL 275
Query: 85 YLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ P E VV+ GW+H V++T+ GEVYTWG
Sbjct: 276 GHGDKVNKTVPTRVESLVEKLVVQITCGWSHTVALTDTGEVYTWG 320
>gi|350994396|ref|NP_001017352.2| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus (Silurana) tropicalis]
gi|89272755|emb|CAJ83624.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus (Silurana) tropicalis]
Length = 599
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 106/257 (41%), Gaps = 36/257 (14%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + + V+++G GT +S I+ LCG D+ G L
Sbjct: 101 NEAIYTTQNNEVFVFGMNSSNCLGTGDNQSTIIPRRLDVLCG-KRIVDLSYGSGPHILVC 159
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
+E G++ +WG G S L +G + P + E V++ A G H +++T G
Sbjct: 160 NEDGEVYSWGH---NGYSQLGNGNAIQGVAPVQVCMELLAKKVIQVACGSHHSMALTSDG 216
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
EV+ WG+ C G GS +T QS +P + + + + +S
Sbjct: 217 EVFCWGYNNC----------GQVGS---GTTANQS-VPRRVSATLQSKVVVSIAAGQSSS 262
Query: 184 SAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
A ++ + G+ L PC + V I +V G HTL LSD G
Sbjct: 263 MAVTDNGHVYCWGYNGTGQLGIGNTGNQLMPCRLVFAHPVCIIQVVLGYAHTLALSDQGV 322
Query: 233 VWGWGYGGEGQLGLGSR 249
++ WG GQLG+G++
Sbjct: 323 LYAWGANSHGQLGIGNK 339
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 25/128 (19%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T+ P + + G +I ++ G G H L+ ++ G+V+ WG+ G QLG G+ I+
Sbjct: 125 TGDNQSTIIPRRLDVLCGKRIVDLSYGSGPHILVCNEDGEVYSWGHNGYSQLGNGNAIQG 184
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
V + C+E LL ++ V ++ACG HS +T G +
Sbjct: 185 VAPVQV--CME---------LLAKK-------------VIQVACGSHHSMALTSDGEVFC 220
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 221 WGYNNCGQ 228
>gi|426231471|ref|XP_004009762.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Ovis aries]
Length = 963
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 106/223 (47%), Gaps = 30/223 (13%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADD----EGQSYLTSGKHGETPEPFPLPTEASV 106
K++ CG +LA S+ G+L WG D G+ + ++ TPE + +
Sbjct: 152 KNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTS----TPEIVENLSGVPL 207
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
V+ +AG AH ++++ +G VY+WG +C G ++ KDS AL +Q
Sbjct: 208 VQISAGEAHSMALSMSGNVYSWGRNDC-------GQLGLGHTYNKDSPSCIEAL-DDQKV 259
Query: 167 PSDKRAGEEVVKRRKTSSAREESE-------NPASGDEFFTLSPCLVTLNPGVKITKVAA 219
G K+ + + ++ +E L PCLV G ++T++A
Sbjct: 260 EFLACGGSHTALLTKSGLVFTFGDGKYGQLGHNSTQNE---LRPCLVAGLVGNRVTQIAC 316
Query: 220 GGRHTL-ILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIP 260
G +HTL +SDMG+V+ +G G EGQLG G +++P P +P
Sbjct: 317 GRQHTLAYVSDMGKVFSFGSGKEGQLGNGGTCNQLMPRPMKLP 359
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 28/136 (20%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAA 266
I ++ G H+L LS G+++ WG +GQLG+G TP + +P ++ +A
Sbjct: 153 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 212
Query: 267 SGKDRPLLVRQGSVNSSGK-------AGRSYVKE---------------IACGGRHSAVV 304
L G+V S G+ G +Y K+ +ACGG H+A++
Sbjct: 213 GEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIEALDDQKVEFLACGGSHTALL 272
Query: 305 TDAGALLTFGWGLYGQ 320
T +G + TFG G YGQ
Sbjct: 273 TKSGLVFTFGDGKYGQ 288
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 92/219 (42%), Gaps = 29/219 (13%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
E ++++ G H +++++ GE++ WG + V R F S + + S +P
Sbjct: 151 EKNIIQITCGDYHSLALSKGGELFAWG-QNLDGQLGVGRIFASTST--PEIVENLSGVPL 207
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + + S R + G + SP + K+ +A GG
Sbjct: 208 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIEALDDQKVEFLACGGS 267
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
HT +L+ G V+ +G G GQLG ++ + RP LV
Sbjct: 268 HTALLTKSGLVFTFGDGKYGQLG-----------------HNSTQNELRPCLV------- 303
Query: 283 SGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQ 320
+G G V +IACG +H+ A V+D G + +FG G GQ
Sbjct: 304 AGLVGNR-VTQIACGRQHTLAYVSDMGKVFSFGSGKEGQ 341
>gi|357520079|ref|XP_003630328.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524350|gb|AET04804.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 316
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 99/243 (40%), Gaps = 50/243 (20%)
Query: 91 HGETPEPFPLPTEAS------VVKAAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDF 143
HG+T + LPT+ S +V G + V+ +++G +VY+WGW DF
Sbjct: 83 HGDTDDRL-LPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWG----------DF 131
Query: 144 GSAGS------FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
G G F L +Q D ++ + S R ++ G
Sbjct: 132 GRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTT 191
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
+ P + G++I VAAG H++ +++ G ++GWG+G G LGLG
Sbjct: 192 KDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGD-----TNDR 246
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
LIP VN G + ++CG RH+ ++ +G L T GW
Sbjct: 247 LIP-----------------EKVNIDGDK----IVMVSCGWRHTISISSSGGLYTHGWSK 285
Query: 318 YGQ 320
YGQ
Sbjct: 286 YGQ 288
>gi|432106315|gb|ELK32196.1| RCC1 and BTB domain-containing protein 1 [Myotis davidii]
Length = 531
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 116/321 (36%), Gaps = 89/321 (27%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + E E V+ Y GT +S + LCG K + G
Sbjct: 28 GTSANEALYVTEDDEVFVFGLNYSNCLGTGDNQSTLTPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H V++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEV+ WG+ C G GS ST Q P K +KR
Sbjct: 144 AADGEVFAWGYNNC----------GQVGS---GSTANQ--------PTPRKVTNCLHIKR 182
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+ +A G ++ + D G+V+GWGY
Sbjct: 183 ----------------------------------VVGIACGQTSSMAVLDTGEVYGWGYN 208
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G GQLGLG+ + + TP VR +++S V +I CG
Sbjct: 209 GNGQLGLGNNVNQL-TP------------------VRVAALHSVC------VNQIVCGYA 243
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
H+ +TD G L +G YGQ
Sbjct: 244 HTLALTDEGLLYAWGANTYGQ 264
>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
Length = 376
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 110/298 (36%), Gaps = 40/298 (13%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
E + P P G V G + T G L T+G + GQ L
Sbjct: 99 ECGDVFVPRPIAFFSGRPVARVACGDTHTLVVTQGDGALYTFGR-NQNGQLGLGHTNDCL 157
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
+P+ V A G H ++ TEAG V++WGW +G+ G D
Sbjct: 158 SPQLVTALQGERVSSVACGSEHSLAATEAGTVFSWGWGR----------YGNLG----DG 203
Query: 154 TGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSP 203
+ PT V R ++ +E GD P
Sbjct: 204 DSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDHVDHTRP 263
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCL 262
CLV +++ VA G RHT+ G ++ WG+ GQLGLG S + PTP
Sbjct: 264 CLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPTP------ 317
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+G + + + V +ACG RH+ VT+AG + ++G G+ GQ
Sbjct: 318 ---VAGFGLAGGGVEAGAATPRR-----VALLACGWRHTVAVTEAGEVYSWGRGVNGQ 367
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 63/164 (38%), Gaps = 29/164 (17%)
Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL-ILSDMGQVWGWGYGGEGQL 244
R E G SP + + V G +T+ + S GQ++ WG+G G+L
Sbjct: 36 RGEDGQLGHGQADQCTSPTCIAALTDAGVDAVVCGAEYTVAVASSRGQIYSWGWGDFGRL 95
Query: 245 GLGS-RIKMVPTPHLIPC---LEHAASGKDRPLLVRQGS-------VNSSGKAGRSY--- 290
G G VP P + A G L+V QG N +G+ G +
Sbjct: 96 GHGECGDVFVPRPIAFFSGRPVARVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTND 155
Query: 291 --------------VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V +ACG HS T+AG + ++GWG YG
Sbjct: 156 CLSPQLVTALQGERVSSVACGSEHSLAATEAGTVFSWGWGRYGN 199
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 55/140 (39%), Gaps = 35/140 (25%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
++ V+ G H++ L D G V WG G +GQLG G + +P I L A G D
Sbjct: 11 RVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHG-QADQCTSPTCIAALTDA--GVDAV 67
Query: 273 LLVRQGSVNSSGKAGRSY-------------------------------VKEIACGGRHS 301
+ + +V + G+ Y V +ACG H+
Sbjct: 68 VCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGRPVARVACGDTHT 127
Query: 302 AVVTDA-GALLTFGWGLYGQ 320
VVT GAL TFG GQ
Sbjct: 128 LVVTQGDGALYTFGRNQNGQ 147
>gi|351542219|ref|NP_001084549.2| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus laevis]
Length = 600
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 108/257 (42%), Gaps = 36/257 (14%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + + V+++G GT +S I+ LCG KD+ G L
Sbjct: 102 NEAIYTTQNNEVFVFGMNSSNCLGTGDNQSAIMPRRLDVLCG-KKIKDLSYGSGPHILLC 160
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
+E G++ +WG G S L +G + P + E V+K A G H +++T G
Sbjct: 161 NEDGEVYSWGH---NGYSQLGNGNTIQGTTPVQVCMELLSKKVIKVACGSHHSMALTSDG 217
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
EV++WG + ++G +T QS +P + + + + + +S
Sbjct: 218 EVFSWG-------------YNNSGQVGSGTTANQS-VPRKVSSSLQSKVVVSIAAGQTSS 263
Query: 184 SAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
A ++ + G+ L PC + V I +V G H+L LSD G
Sbjct: 264 MAITDNGHVYGWGYNGTGQLGLGNTGNQLMPCRLVFAQPVCIIQVVLGYAHSLALSDQGV 323
Query: 233 VWGWGYGGEGQLGLGSR 249
++ WG GQLG+G++
Sbjct: 324 LYAWGANSHGQLGIGNK 340
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 25/128 (19%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD + P + + G KI ++ G G H L+ ++ G+V+ WG+ G QLG G+ I+
Sbjct: 126 TGDNQSAIMPRRLDVLCGKKIKDLSYGSGPHILLCNEDGEVYSWGHNGYSQLGNGNTIQ- 184
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T + C+E LL ++ V ++ACG HS +T G + +
Sbjct: 185 -GTTPVQVCME---------LLSKK-------------VIKVACGSHHSMALTSDGEVFS 221
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 222 WGYNNSGQ 229
>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Nomascus leucogenys]
Length = 979
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 121/317 (38%), Gaps = 91/317 (28%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
++ +L P + +DV GCG + + G + T G +D GQ L K
Sbjct: 18 DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
+ PE ++V + G AH +++ + G+VY WG
Sbjct: 72 RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
DS G+ L +E+ V + K+ S
Sbjct: 111 DSDGQLGLLGSEECI--------RVPRNIKSLS--------------------------D 136
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG+ K +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VTDAGALLTFGWGLYGQ 320
+T G + TFG G YGQ
Sbjct: 257 LTKEGGVFTFGAGGYGQ 273
>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Ailuropoda melanoleuca]
Length = 1129
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 130/330 (39%), Gaps = 75/330 (22%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
WGY P S L I A ++CG S + V CG ++ E G++ T G +
Sbjct: 83 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 141
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
+GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 142 KGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGA---------- 189
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
GS G +T A+P ++ ++ + + S A+ +FFT
Sbjct: 190 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 239
Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
SP V G+ + +VAAGG H+ LS G V+GWG G
Sbjct: 240 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 299
Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
QLGL E S LL Q V I+CG H+A
Sbjct: 300 QLGLSDE-------------EDRESPCHVKLLRTQKVV------------YISCGEEHTA 334
Query: 303 VVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
V+T +G + TFG G GQ L D +N
Sbjct: 335 VLTKSGGVFTFGAGSCGQ-----LGHDSMN 359
>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
[Xenopus laevis]
gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
Length = 1050
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 67/268 (25%), Positives = 103/268 (38%), Gaps = 39/268 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA S G L +WG+ +D + T + P ++ + + + G HC++
Sbjct: 92 GQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLA 151
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+ + G+++TWG G F S+ Q E P + AG
Sbjct: 152 LGDDGQLFTWG-------QNTHGQLGLGNGFISQSS-PQKVKSLEGIPLAQVTAGGSHSF 203
Query: 179 RRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
S A + + DE +PC V K+ ++ G HT IL+ G +
Sbjct: 204 ALSLSGAVFGWGKNSAGQLGLNDEQVKETPCHVKPLRTHKVVYISCGEEHTAILTKAGGL 263
Query: 234 WGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
+ +G GG GQLG S + R +L G S V +
Sbjct: 264 FTFGAGGSGQLGHDSLHNEI---------------NPRRVLELMG----------SEVSQ 298
Query: 294 IACGGRHS-AVVTDAGALLTFGWGLYGQ 320
IACG +H+ A V +G L FG G GQ
Sbjct: 299 IACGRKHTLAFVPSSGTLYAFGCGDLGQ 326
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 77/293 (26%), Positives = 111/293 (37%), Gaps = 88/293 (30%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
CGG L E G++ + G + EGQ L G P P E + A G +H
Sbjct: 41 CGGK--HTLFLMEDGQVYSCG-WNGEGQ--LGHSHEGTHPAPVATLAEEHIKHIACGQSH 95
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
++++ G +Y+WG AG+ D + G
Sbjct: 96 SLALSLQGNLYSWG----------------AGN--------------------DGQLGHA 119
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
V E ++ P ++ KI +++ G H L L D GQ++
Sbjct: 120 TV-------------------EHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGDDGQLFT 160
Query: 236 WGYGGEGQLGLG------SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV-----NSSG 284
WG GQLGLG S + V + IP + A G L G+V NS+G
Sbjct: 161 WGQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAG 220
Query: 285 KAGRS--YVKE---------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ G + VKE I+CG H+A++T AG L TFG G GQ
Sbjct: 221 QLGLNDEQVKETPCHVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGAGGSGQ 273
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/145 (30%), Positives = 65/145 (44%), Gaps = 28/145 (19%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC- 261
PC T + + +VA GG+HTL L + GQV+ G+ GEGQLG S P P
Sbjct: 25 PCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGEGQLG-HSHEGTHPAPVATLAE 83
Query: 262 --LEHAASGKDRPL-LVRQGSVNSSG-----------------------KAGRSYVKEIA 295
++H A G+ L L QG++ S G K + +++++
Sbjct: 84 EHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQQMS 143
Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQ 320
CG H + D G L T+G +GQ
Sbjct: 144 CGDDHCLALGDDGQLFTWGQNTHGQ 168
Score = 40.0 bits (92), Expect = 1.8, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 47/112 (41%), Gaps = 27/112 (24%)
Query: 236 WGYGGEGQLGLGSRIK-MVPTP-----HLIPCL-EHAASGKDRPLLVRQGSV-----NSS 283
WG+ GQLG G +K V P L C+ E A GK L+ G V N
Sbjct: 4 WGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGE 63
Query: 284 GKAGRS---------------YVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G+ G S ++K IACG HS ++ G L ++G G GQ
Sbjct: 64 GQLGHSHEGTHPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQ 115
>gi|66818759|ref|XP_643039.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
gi|60471137|gb|EAL69105.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
Length = 646
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 120/308 (38%), Gaps = 74/308 (24%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAA 111
G ++ S G+L T+G T+G+ G E P+ P P + S+V AA
Sbjct: 201 GSQHSMIVSNYGELYTFGCG--------TTGRLGHGDEQPKFKPTPVSSLVGKSIVSVAA 252
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT----EQAPP 167
G H V G++Y+WGW +G G + + K LPT +
Sbjct: 253 GVMHSSCVDSNGKIYSWGWNR----------YGQLG----NGSVKSQTLPTPPKFQNPKL 298
Query: 168 SD-----------KRAGEEVVKRRKTSSAREESENPA-----------SGDEFFTLSPCL 205
SD K +VV + + A S +G+ L P
Sbjct: 299 SDIQQQQQQHHLMKLNFIKVVCGKNHTLALSSSGEVVGFGFNACGQLGNGNHMDQLYPVK 358
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG------SRIKMVPTPHLI 259
+ N + +A+G H+L L+D G+ + WGY +G LGLG ++ K++P H+
Sbjct: 359 IEFNE--HVIDIASGYYHSLCLTDNGEAYSWGYMSDGSLGLGEVYTHQTKPKLIPLVHIR 416
Query: 260 PCLEHAASGKDRPL----------LVRQGSVNSSGKAGR-SYVKEIACGGRHSAVVTDAG 308
C + + + Q + S K V I+ G +SA++T +G
Sbjct: 417 HCFTDSNDAFNEIYGRQDENTTQETIDQHKLYLSKKYSVGDTVDMISAGAWNSAIITSSG 476
Query: 309 ALLTFGWG 316
L FG+G
Sbjct: 477 KLFCFGFG 484
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 11/127 (8%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMV 253
GDE P V+ G I VAAG H+ + G+++ WG+ GQLG GS + + +
Sbjct: 228 GDEQPKFKPTPVSSLVGKSIVSVAAGVMHSSCVDSNGKIYSWGWNRYGQLGNGSVKSQTL 287
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
PTP P + P L + ++ CG H+ ++ +G ++ F
Sbjct: 288 PTP---PKFQ-------NPKLSDIQQQQQQHHLMKLNFIKVVCGKNHTLALSSSGEVVGF 337
Query: 314 GWGLYGQ 320
G+ GQ
Sbjct: 338 GFNACGQ 344
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 27/108 (25%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRP 272
+ VA G +H++I+S+ G+++ +G G G+LG G + K PTP
Sbjct: 195 FSMVACGSQHSMIVSNYGELYTFGCGTTGRLGHGDEQPKFKPTP---------------- 238
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
S G+S V +A G HS+ V G + ++GW YGQ
Sbjct: 239 ---------VSSLVGKSIV-SVAAGVMHSSCVDSNGKIYSWGWNRYGQ 276
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 19/115 (16%)
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQ-VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
T++ + I ++A G H+L +++ V+ WG GQLG G ++
Sbjct: 128 TIDNKIIIKQIACGDSHSLAIAEQPYGVYSWGVNRWGQLGHGDQLN-------------- 173
Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+++P L+ S S+ +ACG +HS +V++ G L TFG G G+
Sbjct: 174 ---RNQPTLLSNIGSGSGSGNSISF-SMVACGSQHSMIVSNYGELYTFGCGTTGR 224
>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
Length = 1050
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 133/333 (39%), Gaps = 81/333 (24%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
WGY P S L I A ++CG S + V CG ++ E G++ T G +
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCG-LNT 62
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
+GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 63 KGQ--LGHEREGNKPEQIGALADEHIVHVACGESHSLALSDRGQLFSWG----------- 109
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQA---PPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
AG S G+ + TE++ P ++ ++ + + S A+ +
Sbjct: 110 -----AG-----SDGQLGLMTTEESVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQ 157
Query: 198 FFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
FFT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
GQLGL E S LL Q V I+CG
Sbjct: 218 NAGQLGLSDE-------------EDRESPCHVKLLRAQKVV------------YISCGEE 252
Query: 300 HSAVVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
H+AV+T +G + TFG G GQ L D +N
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQ-----LGHDSMN 280
>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
Length = 1049
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 82/307 (26%), Positives = 124/307 (40%), Gaps = 65/307 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASG-DEFFTLSPCLVTLNPGVKITKVAAGGR 222
+A EV S + + G D SP L+ G+ +VAAGG
Sbjct: 154 KA--------SEVF-----SWGQNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQVAAGGA 200
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVR 276
H+ +L+ G ++GWG GQLGL P+L+ L + G+D L +
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRTQKIVYICCGEDHTAALTK 259
Query: 277 QGSVNSSGKAGR----------------------SYVKEIACGGRH-SAVVTDAGALLTF 313
+G V + G G S V +IACG +H SA V +G + +F
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSF 319
Query: 314 GWGLYGQ 320
G G GQ
Sbjct: 320 GLGGNGQ 326
>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Papio anubis]
Length = 979
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 121/317 (38%), Gaps = 91/317 (28%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
++ +L P + +DV GCG + + G + T G +D GQ L K
Sbjct: 18 DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
+ PE ++V + G AH +++ + G+VY WG
Sbjct: 72 RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
DS G+ L +E+ V + K+ S
Sbjct: 111 DSDGQLGLLGSEECI--------RVPRNIKSLS--------------------------D 136
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG+ K +P L IP ++ A
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VTDAGALLTFGWGLYGQ 320
+T G + TFG G YGQ
Sbjct: 257 LTKEGGVFTFGAGGYGQ 273
>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
Length = 983
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 131/332 (39%), Gaps = 79/332 (23%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
WGY P S L I A ++CG S + V CG ++ E G++ T G +
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 62
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
+GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 63 KGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGA---------- 110
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
GS G +T A+P ++ ++ + + S A+ +FFT
Sbjct: 111 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 160
Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
SP V G+ + +VAAGG H+ LS G V+GWG G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
QLGL KDR P V+ V I+CG H
Sbjct: 221 QLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGEEH 253
Query: 301 SAVVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
+AV+T +G + TFG G GQ L D +N
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQ-----LGHDSMN 280
>gi|290980486|ref|XP_002672963.1| predicted protein [Naegleria gruberi]
gi|284086543|gb|EFC40219.1| predicted protein [Naegleria gruberi]
Length = 591
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 97/250 (38%), Gaps = 64/250 (25%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
+ K + HC+ +T G VY+ G E FG G +DSTG ++ +
Sbjct: 137 ITKIETRFKHCLILTRDGFVYSIGDAE----------FGKLGDGYEDSTGTKAPFVRKPV 186
Query: 166 PPSDKRAGEEVVKRRKTSSARE-------------------ESEN-PASGDEFFTLSPCL 205
D+ V K E E+EN P ++F
Sbjct: 187 LIMDRAIDIAVGKHHSAIVTDEGNVHTFGYGKYGQLGHSNFENENVPRVVEDF------- 239
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL--------------GSRIK 251
+N ++ITKVA G HT+ L+D G V+G+G G +GQLG+ +++K
Sbjct: 240 --INRDIRITKVACGDHHTICLTDTGLVYGFGNGSQGQLGVLGFLDIKGDLSQTEKAQLK 297
Query: 252 MVPTPHLIPCLEHAASGKD--RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA 309
VP P L+ + + R L ++ V G I CG +SA + G
Sbjct: 298 YVPRPRLVEIMRETQQETEEYRRLRTKKTFVEIDG---------IMCGSDYSAFLAKHGQ 348
Query: 310 LLTFGWGLYG 319
L G G+ G
Sbjct: 349 LWLCGCGMTG 358
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 53/120 (44%), Gaps = 34/120 (28%)
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG------LGSRIKMVPTPHLIP 260
T+ P KITK+ +H LIL+ G V+ G G+LG G++ V P LI
Sbjct: 130 TVIPPYKITKIETRFKHCLILTRDGFVYSIGDAEFGKLGDGYEDSTGTKAPFVRKPVLI- 188
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
DR + +IA G HSA+VTD G + TFG+G YGQ
Sbjct: 189 --------MDRAI-------------------DIAVGKHHSAIVTDEGNVHTFGYGKYGQ 221
>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Saimiri boliviensis boliviensis]
Length = 979
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 121/317 (38%), Gaps = 91/317 (28%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
++ +L P + +DV GCG + + G + T G +D GQ L K
Sbjct: 18 DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
+ PE ++V + G AH +++ + G+VY WG
Sbjct: 72 RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
DS G+ L +E+ V + K+ S
Sbjct: 111 DSDGQLGLLGSEECI--------RVPRNIKSLS--------------------------D 136
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG+ K +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VTDAGALLTFGWGLYGQ 320
+T G + TFG G YGQ
Sbjct: 257 LTKEGGVFTFGAGGYGQ 273
>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
familiaris]
Length = 1050
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 130/330 (39%), Gaps = 75/330 (22%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
WGY P S L I A ++CG S + V CG ++ E G++ T G +
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 62
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
+GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 63 KGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGA---------- 110
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
GS G +T A+P ++ ++ + + S A+ +FFT
Sbjct: 111 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 160
Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
SP V G+ + +VAAGG H+ LS G V+GWG G
Sbjct: 161 WGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
QLGL E S LL Q V I+CG H+A
Sbjct: 221 QLGLSDE-------------EDRESPCHVKLLRTQKVV------------YISCGEEHTA 255
Query: 303 VVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
V+T +G + TFG G GQ L D +N
Sbjct: 256 VLTKSGGVFTFGAGSCGQ-----LGHDSMN 280
>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
adamanteus]
Length = 1052
Score = 66.6 bits (161), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/155 (32%), Positives = 70/155 (45%), Gaps = 28/155 (18%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
SG E +T P + ++I +VA G H+L LS +V+ WG GQLGLG K
Sbjct: 119 SGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQ 178
Query: 254 PTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE---- 293
+P + IP + AA G +L G+V N G+ G + YV
Sbjct: 179 ASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKS 238
Query: 294 --------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
I+CG H+A +T G + TFG G YGQ
Sbjct: 239 LRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 58.9 bits (141), Expect = 4e-06, Method: Composition-based stats.
Identities = 44/132 (33%), Positives = 57/132 (43%), Gaps = 31/132 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASG 268
I V+ G HTL L+D GQV+ WG+ +GQLGL + P I L A G
Sbjct: 86 IVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVPRNIKSLSDIQIVQVACG 145
Query: 269 KDRPLLVRQGS------VNSSGKAGRSY------------------VKEIACGGRHSAVV 304
L + +GS N G+ G Y +IA GG HS V+
Sbjct: 146 YFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVL 205
Query: 305 TDAGALLTFGWG 316
T +GA+ FGWG
Sbjct: 206 TLSGAV--FGWG 215
Score = 58.2 bits (139), Expect = 6e-06, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 110/271 (40%), Gaps = 45/271 (16%)
Query: 60 CGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG A LA ++ G++ WG A D + ++ P ++ +V+ A G+ H +
Sbjct: 91 CGEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSL 150
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDSTGK--QSAL--PTEQAPPSDK 170
++++ EV++WG + +G G ++K ++ + +S L P Q
Sbjct: 151 ALSKGSEVFSWGQNK----------YGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGA 200
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
+ + R + DE P L+ KI ++ G HT L+
Sbjct: 201 HSFVLTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKE 260
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
G V+ +G GG GQLG S T H I R + G++
Sbjct: 261 GGVFTFGAGGYGQLGHNS------TAHEI---------NPRKVFELMGNI---------- 295
Query: 291 VKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V G + +FG G GQ
Sbjct: 296 VTQIACGRQHTSAFVPSTGRIYSFGLGGNGQ 326
>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
Length = 1050
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 130/330 (39%), Gaps = 75/330 (22%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
WGY P S L I A ++CG S + V CG ++ E G++ T G +
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 62
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
+GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 63 KGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGA---------- 110
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
GS G +T A+P ++ ++ + + S A+ +FFT
Sbjct: 111 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 160
Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
SP V G+ + +VAAGG H+ LS G V+GWG G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
QLGL E S LL Q V I+CG H+A
Sbjct: 221 QLGLSDE-------------EDRESPCHVKLLRTQKVV------------YISCGEEHTA 255
Query: 303 VVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
V+T +G + TFG G GQ L D +N
Sbjct: 256 VLTKSGGVFTFGAGSCGQ-----LGHDSMN 280
>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
[Pan troglodytes]
gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 66.6 bits (161), Expect = 2e-08, Method: Composition-based stats.
Identities = 77/306 (25%), Positives = 124/306 (40%), Gaps = 63/306 (20%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRH-SAVVTDAGALLTFG 314
G V + G G S V +IACG +H SA V +G + +FG
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFG 320
Query: 315 WGLYGQ 320
G GQ
Sbjct: 321 LGGNGQ 326
>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Pan troglodytes]
gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 66.6 bits (161), Expect = 2e-08, Method: Composition-based stats.
Identities = 77/306 (25%), Positives = 124/306 (40%), Gaps = 63/306 (20%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRH-SAVVTDAGALLTFG 314
G V + G G S V +IACG +H SA V +G + +FG
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFG 320
Query: 315 WGLYGQ 320
G GQ
Sbjct: 321 LGGNGQ 326
>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pan paniscus]
gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 77/306 (25%), Positives = 124/306 (40%), Gaps = 63/306 (20%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRH-SAVVTDAGALLTFG 314
G V + G G S V +IACG +H SA V +G + +FG
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFG 320
Query: 315 WGLYGQ 320
G GQ
Sbjct: 321 LGGNGQ 326
>gi|336118147|ref|YP_004572915.1| hypothetical protein MLP_24980 [Microlunatus phosphovorus NM-1]
gi|334685927|dbj|BAK35512.1| hypothetical protein MLP_24980 [Microlunatus phosphovorus NM-1]
Length = 463
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 139/360 (38%), Gaps = 95/360 (26%)
Query: 15 EECKETVVYMWGYLP----GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESG 70
+E + T Y+WGY G + + + SP PARL G D+ GG F +A +ESG
Sbjct: 3 KEKQATYAYVWGYNNTGELGVN-HAARVYSPRPARLPAG--IVDLQGG-ANFTIALTESG 58
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+++TWGS ++ GQ S + TP+ LP AAG H V VT G + TWG
Sbjct: 59 RVLTWGS-NEHGQLGDGSRRPRRTPQQVRLPEGHRAAAIAAGTDHVVVVTTRGHLITWGR 117
Query: 131 ----------RECVPSAKVTRDFGSAGSFQKDSTGK-------------------QSALP 161
R+ S KV R A + +K + G Q L
Sbjct: 118 NHRGQLGTGDRDDRLSPKVVR----AETVRKVAAGDGISAAITPGGRLLTWGRNGQGQLA 173
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD----EFFTLSPCLVTLNPGV----- 212
+ + P G +V+ K AR+ SE ++ D L+ L GV
Sbjct: 174 QKGSVP----VGRDVL---KPIHARQVSEPVSAVDAGLRHLVVLTSDGDVLMFGVDVAGL 226
Query: 213 -------------KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
++ + AG HTL L+ G + GWG GQL G
Sbjct: 227 PLGKKMALPARWGQVRTIVAGEDHTLALTRRGVILGWGANDLGQLATGDS---------- 276
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
H S P++V+ V R V +I G RH +TD + +G G +G
Sbjct: 277 ---AHQLS----PVVVKLSGV-------RGQVTQIRAGHRHGLALTDKHEVYAWGDGSFG 322
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 87/203 (42%), Gaps = 37/203 (18%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP------EPFPLPTEASVVKAA-A 111
G G + A + G+L+TWG GQ L + G P +P + V A A
Sbjct: 148 GDGISAAITPGGRLLTWGR---NGQGQLA--QKGSVPVGRDVLKPIHARQVSEPVSAVDA 202
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G H V +T G+V +G V A + GK+ ALP
Sbjct: 203 GLRHLVVLTSDGDVLMFG----VDVAGL-------------PLGKKMALPARWGQVRTIV 245
Query: 172 AGEE---VVKRRKTSSA--REESENPASGDEFFTLSPCLVTLNPGVK--ITKVAAGGRHT 224
AGE+ + RR + A+GD LSP +V L+ GV+ +T++ AG RH
Sbjct: 246 AGEDHTLALTRRGVILGWGANDLGQLATGDSAHQLSPVVVKLS-GVRGQVTQIRAGHRHG 304
Query: 225 LILSDMGQVWGWGYGGEGQLGLG 247
L L+D +V+ WG G G +G G
Sbjct: 305 LALTDKHEVYAWGDGSFGAIGTG 327
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 94/240 (39%), Gaps = 43/240 (17%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
+P P LP A +V G +++TE+G V TWG E G GS +
Sbjct: 31 SPRPARLP--AGIVDLQGGANFTIALTESGRVLTWGSNEH-------GQLGD-GSRRPRR 80
Query: 154 TGKQSALPTEQAPPSDKRAGEEVV----KRRKTSSAREESENPASGDEFFTLSPCLVTLN 209
T +Q LP + + VV + + R +GD LSP +V
Sbjct: 81 TPQQVRLPEGHRAAAIAAGTDHVVVVTTRGHLITWGRNHRGQLGTGDRDDRLSPKVVRAE 140
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
+ KVAAG + ++ G++ WG G+GQL + + G+
Sbjct: 141 ---TVRKVAAGDGISAAITPGGRLLTWGRNGQGQLAQKGSVPV---------------GR 182
Query: 270 D--RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQRMAKCLA 327
D +P+ RQ S V + G RH V+T G +L FG + G + K +A
Sbjct: 183 DVLKPIHARQVS---------EPVSAVDAGLRHLVVLTSDGDVLMFGVDVAGLPLGKKMA 233
>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Callithrix jacchus]
Length = 979
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 121/317 (38%), Gaps = 91/317 (28%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
++ +L P + +DV GCG + + G + T G +D GQ L K
Sbjct: 18 DEEIVLEPRKSDFFINKKVQDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
+ PE ++V + G AH +++ + G+VY WG
Sbjct: 72 RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
DS G+ L +E+ V + K+ S
Sbjct: 111 DSDGQLGLLGSEECI--------RVPRNIKSLS--------------------------D 136
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG+ K +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VTDAGALLTFGWGLYGQ 320
+T G + TFG G YGQ
Sbjct: 257 LTKEGGVFTFGAGGYGQ 273
>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
Length = 1050
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 130/330 (39%), Gaps = 75/330 (22%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
WGY P S L I A ++CG S + V CG ++ E G++ T G +
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 62
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
+GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 63 KGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGA---------- 110
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
GS G +T A+P ++ ++ + + S A+ +FFT
Sbjct: 111 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 160
Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
SP V G+ + +VAAGG H+ LS G V+GWG G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
QLGL E S LL Q V I+CG H+A
Sbjct: 221 QLGLSDE-------------EDRESPCHVKLLRTQKVV------------YISCGEEHTA 255
Query: 303 VVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
V+T +G + TFG G GQ L D +N
Sbjct: 256 VLTKSGGVFTFGAGSCGQ-----LGHDSMN 280
>gi|399216069|emb|CCF72757.1| unnamed protein product [Babesia microti strain RI]
Length = 1470
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 74/305 (24%), Positives = 123/305 (40%), Gaps = 53/305 (17%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP--TEASVVKAAAGWAHCVSVT 120
LA S + TWGS ++GE EP +P + S ++ + G AH +
Sbjct: 49 GLAVSRDKGVYTWGSIWHNAMGL--GIENGEVKEPIKIPFFEDKSALQVSCGDAHSAVLV 106
Query: 121 EA-----GEVYTWG--------WRECVPSAKVTRDFGSAGSFQKDSTGKQSA-----LPT 162
G VYT+G + +C S + D +A F+ D K + +
Sbjct: 107 ATDSNYLGTVYTFGLGNNGRLGYPKCGQS--IDNDNDNANVFRDDQNEKSNGTIHTDIMD 164
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAR----EESENPASGDEFFTLSPCLVTLNPGVKITKVA 218
++ S K +++ RK S + S + + +F+ P V L +K+ V+
Sbjct: 165 DKNNISSKNNPKKIQLNRKVSLEEVLQCDTSASHLNNQSWFSTRPFRVKLK--LKVRLVS 222
Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV-PTPHLIPCLEHAASGKDRPLLVRQ 277
G HTL++ + +W WG G G LGLGS + PT + + H ++G L V
Sbjct: 223 CGSAHTLVICEDSSLWSWGRGNFGVLGLGSNCDVFEPTKVALDNVTHVSAGDRHSLAVSN 282
Query: 278 GSVNS-----SGKAGRSYVKE-----------------IACGGRHSAVVTDAGALLTFGW 315
S+ S +G+ G + K ++ G HSA + G + T+G
Sbjct: 283 NSLYSWGYGANGRLGLYHSKNVYDPSLVNGKGFDQVLYVSAGQSHSACINCRGEIFTWGS 342
Query: 316 GLYGQ 320
G G+
Sbjct: 343 GQGGR 347
>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pan paniscus]
gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 77/306 (25%), Positives = 124/306 (40%), Gaps = 63/306 (20%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRH-SAVVTDAGALLTFG 314
G V + G G S V +IACG +H SA V +G + +FG
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFG 320
Query: 315 WGLYGQ 320
G GQ
Sbjct: 321 LGGNGQ 326
>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Callithrix jacchus]
Length = 1050
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 131/332 (39%), Gaps = 79/332 (23%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
WGY P S L I A ++CG S + V CG ++ E G++ T G +
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 62
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
+GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 63 KGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA---------- 110
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
GS G +T A+P ++ ++ + + S A+ +FFT
Sbjct: 111 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 160
Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
SP V G+ + +VAAGG H+ LS G V+GWG G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
QLGL KDR P V+ V I+CG H
Sbjct: 221 QLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGEEH 253
Query: 301 SAVVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
+AV+T +G + TFG G GQ L D +N
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQ-----LGHDSMN 280
>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Equus caballus]
Length = 1049
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 74/292 (25%), Positives = 108/292 (36%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLHDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG DS G+ L +E+ V
Sbjct: 97 LALNDKGQVYAWGL---------------------DSDGQLGLLGSEECI--------RV 127
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ K+ S ++I +VA G H+L LS +V+ W
Sbjct: 128 PRNIKSLS--------------------------DIQIVQVACGYYHSLALSKASEVFCW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG K +P L IP ++ AA G +L G++ N G+
Sbjct: 162 GQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 286 AG-----------------RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + I CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 45/278 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDSTGK--QSAL--PTE 163
G+ H +++++A EV+ WG + +G G ++K ++ + +S L P
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK----------YGQLGLGIDYKKQASPQLIKSLLGIPFM 193
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
Q + + R + DE P L+ KI + G H
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDH 253
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
T L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI--- 295
Query: 284 GKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V +G + +FG G GQ
Sbjct: 296 -------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Equus caballus]
Length = 1057
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 74/292 (25%), Positives = 108/292 (36%), Gaps = 88/292 (30%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLHDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG DS G+ L +E+ V
Sbjct: 97 LALNDKGQVYAWGL---------------------DSDGQLGLLGSEECI--------RV 127
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ K+ S ++I +VA G H+L LS +V+ W
Sbjct: 128 PRNIKSLS--------------------------DIQIVQVACGYYHSLALSKASEVFCW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG K +P L IP ++ AA G +L G++ N G+
Sbjct: 162 GQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 286 AG-----------------RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + I CG H+A +T G + TFG G YGQ
Sbjct: 222 LGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 45/278 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A LA ++ G++ WG D L S + P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDSTGK--QSAL--PTE 163
G+ H +++++A EV+ WG + +G G ++K ++ + +S L P
Sbjct: 144 CGYYHSLALSKASEVFCWGQNK----------YGQLGLGIDYKKQASPQLIKSLLGIPFM 193
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
Q + + R + DE P L+ KI + G H
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDH 253
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
T L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI--- 295
Query: 284 GKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V +IACG +H SA V +G + +FG G GQ
Sbjct: 296 -------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Papio anubis]
Length = 1050
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 131/332 (39%), Gaps = 79/332 (23%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
WGY P S L I A ++CG S + V CG ++ E G++ T G +
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 62
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
+GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 63 KGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA---------- 110
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
GS G +T A+P ++ ++ + + S A+ +FFT
Sbjct: 111 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 160
Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
SP V G+ + +VAAGG H+ LS G V+GWG G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
QLGL KDR P V+ V I+CG H
Sbjct: 221 QLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGEEH 253
Query: 301 SAVVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
+AV+T +G + TFG G GQ L D +N
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQ-----LGHDSMN 280
>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Nomascus leucogenys]
Length = 1050
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 131/332 (39%), Gaps = 79/332 (23%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
WGY P S L I A ++CG S + V CG ++ E G++ T G +
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 62
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
+GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 63 KGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA---------- 110
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
GS G +T A+P ++ ++ + + S A+ +FFT
Sbjct: 111 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 160
Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
SP V G+ + +VAAGG H+ LS G V+GWG G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
QLGL KDR P V+ V I+CG H
Sbjct: 221 QLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGEEH 253
Query: 301 SAVVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
+AV+T +G + TFG G GQ L D +N
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQ-----LGHDSMN 280
>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
Length = 1050
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 131/332 (39%), Gaps = 79/332 (23%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
WGY P S L I A ++CG S + V CG ++ E G++ T G +
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 62
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
+GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 63 KGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA---------- 110
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
GS G +T A+P ++ ++ + + S A+ +FFT
Sbjct: 111 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 160
Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
SP V G+ + +VAAGG H+ LS G V+GWG G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
QLGL KDR P V+ V I+CG H
Sbjct: 221 QLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGEEH 253
Query: 301 SAVVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
+AV+T +G + TFG G GQ L D +N
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQ-----LGHDSMN 280
>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
Length = 382
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 127/325 (39%), Gaps = 84/325 (25%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQA---PPSDKRAGEEVVKRRKTSSAREESENPASG 195
S G+ + TE + P ++ ++ + + S A+
Sbjct: 110 ------------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAAD 155
Query: 196 DEFFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
+FFT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 156 GQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWG 215
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIA 295
GQLGL KDR P V+ V I+
Sbjct: 216 MNNAGQLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYIS 248
Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQ 320
CG H+AV+T +G + TFG G GQ
Sbjct: 249 CGEEHTAVLTKSGGVFTFGAGSCGQ 273
>gi|301755556|ref|XP_002913645.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC5-like
[Ailuropoda melanoleuca]
Length = 1035
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 28/135 (20%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP----HL--IPCLEHAAS 267
I ++A G H+L LS G+++ WG GQLG+G +PTP HL +P ++ +A
Sbjct: 151 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAG 210
Query: 268 GKDRPLLVRQGSVNSSGKA-----------GRSY-----------VKEIACGGRHSAVVT 305
L G+V S G+ G + V+ +ACGG H+A++T
Sbjct: 211 KAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLT 270
Query: 306 DAGALLTFGWGLYGQ 320
G + TFG G YGQ
Sbjct: 271 TDGLVFTFGAGKYGQ 285
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 74/257 (28%), Positives = 116/257 (45%), Gaps = 51/257 (19%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVV 107
K + CG +LA S+ G+L WG + GQ L G+ TP+ + +V
Sbjct: 149 KSIIQIACGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRLFASIPTPQAVEHLSGVPLV 205
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWR------------ECVPSAKVTRD-----FGSAGSFQ 150
+ +AG AH ++++ +G VY+WG E PS T D F + G
Sbjct: 206 QISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACG--- 262
Query: 151 KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNP 210
G +AL T AG+ + +S + E L P LVT
Sbjct: 263 ----GSHTALLTTDGLVFTFGAGK--YGQLGHNSTQNE------------LRPRLVTELA 304
Query: 211 GVKITKVAAGGRHTLI-LSDMGQVWGWGYGGEGQLGL-GSRIKMVPTPHLIPC---LEHA 265
G ++T++A G RHTL +SD+G+V+ +G G EGQLG G+ +++P P +P L+
Sbjct: 305 GNRVTQIACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFE 364
Query: 266 ASGKDRPLLVRQGSVNS 282
+ D+ L++ G S
Sbjct: 365 SRTSDKELVMIAGGNQS 381
>gi|307190185|gb|EFN74300.1| X-linked retinitis pigmentosa GTPase regulator [Camponotus
floridanus]
Length = 807
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 108/283 (38%), Gaps = 84/283 (29%)
Query: 40 SPIPARLCG--GDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
SPI CG G + G + TS+ G ++ WGS + EGQ L G G +P
Sbjct: 179 SPILIYDCGLAGPRIVQIAAGSHHSMILTSDGG-VVAWGS-NLEGQLGL-PGVSGLVNKP 235
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+P V + +AG+ H +TE+G VY G E S K+ D +F KQ
Sbjct: 236 TKVPIPEPVKEISAGYYHSAFLTESGLVYVCGESE---SGKLGIDV----NFSTQVAPKQ 288
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKV 217
LPT P + +T
Sbjct: 289 MQLPT-----------------------------------------------PAIHVT-- 299
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
GG HTL+L++ ++ G GQLG+G+ + + P +H A G R
Sbjct: 300 -CGGHHTLVLAENSNIYCSGSNASGQLGMGTNLNEIHMP------KHLARGSLR------ 346
Query: 278 GSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +IACG HSA++T+ G L T G G +G+
Sbjct: 347 ----------NEKIVKIACGESHSAILTELGKLFTCGDGRHGK 379
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 64/154 (41%), Gaps = 38/154 (24%)
Query: 190 ENPASGDEFFTLSPCLVTL--NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
EN A GD + SP L+ G +I ++AAG H++IL+ G V WG EGQLGL
Sbjct: 169 ENSAIGDS--SSSPILIYDCGLAGPRIVQIAAGSHHSMILTSDGGVVAWGSNLEGQLGLP 226
Query: 248 SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA 307
+V P +P E VKEI+ G HSA +T++
Sbjct: 227 GVSGLVNKPTKVPIPE--------------------------PVKEISAGYYHSAFLTES 260
Query: 308 GALLTFGWGLYGQRMAKCLAGDGINMGSWVWVTP 341
G + G G+ GI++ V P
Sbjct: 261 GLVYVCGESESGKL--------GIDVNFSTQVAP 286
>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
kowalevskii]
Length = 353
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 102/263 (38%), Gaps = 84/263 (31%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G + A + G L WGS EGQ L + ETP+ L +SV + G+ H
Sbjct: 147 GTDHSAALTTDGTLYMWGSGS-EGQLGLGNTDSVETPKE--LKFHSSVSWVSCGYYHTAI 203
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
VT+ G++YT+G +E FG G L +Q E+
Sbjct: 204 VTDDGKLYTFGEKE----------FGKLG------------LTEDQL--------EDTTT 233
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
+ S E KI VA GG HT ++SD+G ++ +G
Sbjct: 234 PKHVESITE-------------------------KIKLVACGGAHTAVISDVGNLYTFGD 268
Query: 239 GGEGQLGLGSRIKMVPTPHLIPCL-EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
G GQLG G + + P + L EH K ++CG
Sbjct: 269 GMHGQLGNGPSLLQLSLPQKVARLSEHKC-------------------------KYVSCG 303
Query: 298 GRHSAVVTDAGALLTFGWGLYGQ 320
H+AV+T+ GA+ TFG G +G+
Sbjct: 304 DNHTAVITEKGAMYTFGDGRHGK 326
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 90/220 (40%), Gaps = 44/220 (20%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
+ + G H +TE+G +YT+G + D+G G T K + + +
Sbjct: 39 MHISCGDEHSAIITESGRLYTFG----------SNDWGQLGLGHMKPTTKPGCVKSLKQE 88
Query: 167 PSDKRAGEEVVKRRKTSSAREESENPAS------GDEFFTLSPCLVTLNPGVKITKVAAG 220
+ A T + R S S GD SP L+ L P K ++AG
Sbjct: 89 GVNLVACGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATSPQLINL-PEQKYKLLSAG 147
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
H+ L+ G ++ WG G EGQLGLG+ V TP ++
Sbjct: 148 TDHSAALTTDGTLYMWGSGSEGQLGLGN-TDSVETP-------------------KELKF 187
Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+SS V ++CG H+A+VTD G L TFG +G+
Sbjct: 188 HSS-------VSWVSCGYYHTAIVTDDGKLYTFGEKEFGK 220
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 25/108 (23%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
K ++ G H+ I+++ G+++ +G GQLGLG M PT
Sbjct: 37 KAMHISCGDEHSAIITESGRLYTFGSNDWGQLGLG---HMKPT----------------- 76
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ G V S + G V +ACG H+ V T AG L +FG G GQ
Sbjct: 77 --TKPGCVKSLKQEG---VNLVACGRSHTIVCTKAGRLYSFGAGSDGQ 119
>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
Length = 353
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 105/274 (38%), Gaps = 53/274 (19%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP-----FPLPTEASVVKAAAGW 113
G ++A L +WG +D GQ L G + P F P SV+ A
Sbjct: 21 GASHSVALLTGNVLCSWGRGED-GQ--LGHGDAEDRLVPTVLSGFDAPAITSVICGAD-- 75
Query: 114 AHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAP 166
H + +E +VY+WGW DFG G F L +Q
Sbjct: 76 -HTTAYSEDELQVYSWGWG----------DFGRLGHGNSSDVFTPQPVKALQGLKIKQIA 124
Query: 167 PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
D + S R ++ G +L P + V + +AAG HT
Sbjct: 125 CGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAA 184
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
+++ G ++GWG+G G LGLG R DR L + SV
Sbjct: 185 VTEDGDLYGWGWGRYGNLGLGDR-------------------NDRLLPEKVSSVE----- 220
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G V +ACG RH+ V+D+G L T+GW YGQ
Sbjct: 221 GEKMVL-VACGWRHTITVSDSGNLYTYGWSKYGQ 253
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 98/244 (40%), Gaps = 63/244 (25%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
TP+P + + A G +HC++VT AGEV +WG ++
Sbjct: 108 TPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWG---------------------RNQ 146
Query: 154 TGKQSALPTEQAP-PSDKRAGEEVVKR------RKTSSAREESE----------NPASGD 196
G+ TE + P +A E V + T++ E+ + N GD
Sbjct: 147 NGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGD 206
Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
L P V+ G K+ VA G RHT+ +SD G ++ +G+ GQLG G + P
Sbjct: 207 RNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHL-VP 265
Query: 257 HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
H + L KD S + +I+ G RH+ +T G L +GW
Sbjct: 266 HKVEAL------KD------------------STISQISGGWRHTMALTSEGKLYGWGWN 301
Query: 317 LYGQ 320
+GQ
Sbjct: 302 KFGQ 305
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 98/245 (40%), Gaps = 29/245 (11%)
Query: 18 KETVVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
E VY WG + S + +P P + G K + G LA + +G++ +
Sbjct: 83 DELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDS-HCLAVTMAGEVQS 141
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
WG + GQ L + + P+ V AAG H +VTE G++Y WGW
Sbjct: 142 WGR-NQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGR-- 198
Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE---- 190
+G+ G ++ LP + + ++ R T + +
Sbjct: 199 --------YGNLGLGDRN----DRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTY 246
Query: 191 ------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
GD L P V I++++ G RHT+ L+ G+++GWG+ GQ+
Sbjct: 247 GWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQV 306
Query: 245 GLGSR 249
G+G+
Sbjct: 307 GVGNN 311
>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
Length = 396
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 115/305 (37%), Gaps = 58/305 (19%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +LA + GKL TWG + K TP +V+AA G HC+
Sbjct: 45 GGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGAWHCL 104
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF-QKDSTGKQSALPTEQAPPSDKRAGEEV 176
+V + G Y WG E +G G KD TG+ P + KR +++
Sbjct: 105 AVDDQGRAYAWGGNE----------YGQCGEEPSKDETGR----PVRRDIVIPKRCAQQL 150
Query: 177 VKRRK----TSSAREESENPA--------SGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
R+ T S E GD P V V++ +A G H
Sbjct: 151 TVRQVAAGGTHSVVLTREGYVWTWGQPWPPGDIKQISVPVRVQGLENVRL--IAVGAFHN 208
Query: 225 LILSDMGQVWGWGYGGEGQLGLGS---RIKMVPTPHL--IPCLEHAASGKDRPLLVRQGS 279
L L + G +W WG GQLG G R +P L + ++ AA G L +G
Sbjct: 209 LALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGE 268
Query: 280 VN--SSGKAGR----------------------SYVKEIACGGRHSAVVTDAGALLTFGW 315
V G+ GR + +++CGG HS +T G + +FG
Sbjct: 269 VYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLPGEDIIQVSCGGTHSVALTRDGRIFSFGR 328
Query: 316 GLYGQ 320
G +G+
Sbjct: 329 GDHGR 333
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI---KM 252
D+ + P V L PG I +V+ GG H++ L+ G+++ +G G G+LG G ++ +
Sbjct: 286 DKSSKMLPQKVNLLPGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQP 345
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+ P IP E + D G+ K +ACGGRH+ + +
Sbjct: 346 LELPIHIPPPEGRFNHTDEE------------DDGKWIAKHVACGGRHTLAIVE 387
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 62/156 (39%), Gaps = 40/156 (25%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
DE L+ + L P + V G R++L + D G+++ WG+ G LG K T
Sbjct: 23 DEEKELASVVDALEP-FNVRSVVGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTEST 81
Query: 256 PHLIPCL------------------------------EHAASGKD-------RPLLVRQG 278
P L+ L E+ G++ RP VR+
Sbjct: 82 PSLVKSLANVKIVQAAIGAWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRP--VRRD 139
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
V A + V+++A GG HS V+T G + T+G
Sbjct: 140 IVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWG 175
>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
gaditana CCMP526]
Length = 511
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 110/279 (39%), Gaps = 63/279 (22%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G G + +E + +WG DD G+ P T S+ + G H +
Sbjct: 47 GSGHTVVLTEDKDVWSWGRGDD-GRLGHADNHWKYVPHLVSALTGKSIKQVTCGSYHTAA 105
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP-PSDKRAGEEVV 177
+++ G ++TWG G + K G + P AP + G EV
Sbjct: 106 ISDTGALWTWG----------------GGMYGKLGHGNEVGHP---APCRVEAFIGREVE 146
Query: 178 K----RRKTSSAREESENPASGD------------EFFTLSPCLVTLNPGVKITKVAAGG 221
+ R T++ E GD E L L L GVKIT++AA G
Sbjct: 147 QIACGSRHTAALLAGGEVYCWGDRENGVCGIGEAAEHQYLPKKLEAL-KGVKITQIAACG 205
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
HT ++ G +W WG G G+LG G+ V PC G VR
Sbjct: 206 FHTAAITQDGALWSWGEGKFGRLGQGNEKNQVT-----PCCVEGLQG------VR----- 249
Query: 282 SSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
VK++ACGG HSA VT+ G +LTFG G +GQ
Sbjct: 250 ---------VKQVACGGFHSACVTEDGDVLTFGGGEHGQ 279
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 105/270 (38%), Gaps = 57/270 (21%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVT 120
A S++G L TWG G Y G E P P EA V + A G H ++
Sbjct: 105 AISDTGALWTWG-----GGMYGKLGHGNEVGHPAPCRVEAFIGREVEQIACGSRHTAALL 159
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
GEVY WG RE G + LP + + +
Sbjct: 160 AGGEVYCWGDRE-------------NGVCGIGEAAEHQYLPKKLEALKGVKITQIAACGF 206
Query: 181 KTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
T++ ++ G+E ++PC V GV++ +VA GG H+ +++
Sbjct: 207 HTAAITQDGALWSWGEGKFGRLGQGNEKNQVTPCCVEGLQGVRVKQVACGGFHSACVTED 266
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
G V +G G GQLG G + T +PCL A G AG
Sbjct: 267 GDVLTFGGGEHGQLGHGDK-----TNRTVPCLVKALEG-----------------AG--- 301
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ ++ CG H+ +++ G + TFG G +G+
Sbjct: 302 IVQVTCGWSHTVTLSEDGKVFTFGNGDHGK 331
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+ + ++A G HT++L++ VW WG G +G+LG PHL+ L
Sbjct: 39 LTVVQIACGSGHTVVLTEDKDVWSWGRGDDGRLGHADN-HWKYVPHLVSAL--------- 88
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+GK+ +K++ CG H+A ++D GAL T+G G+YG+
Sbjct: 89 -----------TGKS----IKQVTCGSYHTAAISDTGALWTWGGGMYGK 122
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GD+ PCLV G I +V G HT+ LS+ G+V+ +G G G+LG G+ K
Sbjct: 283 GDKTNRTVPCLVKALEGAGIVQVTCGWSHTVTLSEDGKVFTFGNGDHGKLGHGANAKS-A 341
Query: 255 TPHLIPCLEHAASGK 269
P L+ L + K
Sbjct: 342 LPKLVESLANMKVAK 356
>gi|408500684|ref|YP_006864603.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465508|gb|AFU71037.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1173
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 120/298 (40%), Gaps = 43/298 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQ--SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G GF++A + G L +WG + GQ +TS P P + V+A+AG +H
Sbjct: 769 GYGFSVALASDGSLYSWGD-NSRGQLGRTVTSNNPANRPHKVEAPAGITFVQASAGGSHV 827
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA-LPTEQAPPSDKRAGEE 175
V+++ G +YTWG SAG + T A P + P+D
Sbjct: 828 VALSSDGNIYTWG-------------DNSAGQLGRTVTSNNPADKPGKADTPADVTFTSV 874
Query: 176 VVKRRKTSSAREESENPASGDEFF------TLS-----PCLVTLNPGVKITKVAAGGRHT 224
+ T + + + GD T S P G+ T+ +AG H+
Sbjct: 875 SAGQGHTVAVDTQGDVYTWGDNTHGELGRSTTSTPADKPGKADTPAGITFTQASAGESHS 934
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIK------MVPTPHLIPCLEHAASGKDRPLLVRQG 278
+ +SD G ++ WG G+LG + I TP + + +A GK L G
Sbjct: 935 VAVSDDGSIYTWGDTANGRLGRDTNITPADKPGKADTPAGVTFTQASAGGKHSIALGSDG 994
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQRMAKCLAGDGINMGSW 336
S+ + G +G++ GR + V T AG +TF G L DG N+ SW
Sbjct: 995 SLYTWGDSGKT------SAGRPNKVDTPAG--ITFTQASAGASYCLALGSDG-NLYSW 1043
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 77/196 (39%), Gaps = 29/196 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G G +A G + TWG T+ + P P + +A+AG +H V+
Sbjct: 877 GQGHTVAVDTQGDVYTWGDNTHGELGRSTTSTPADKPGKADTPAGITFTQASAGESHSVA 936
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
V++ G +YTWG + ++ RD + P ++ +D AG V
Sbjct: 937 VSDDGSIYTWG---DTANGRLGRD--------------TNITPADKPGKADTPAG---VT 976
Query: 179 RRKTSSAREESENPASGDEFFTL---------SPCLVTLNPGVKITKVAAGGRHTLILSD 229
+ S+ + S S +T P V G+ T+ +AG + L L
Sbjct: 977 FTQASAGGKHSIALGSDGSLYTWGDSGKTSAGRPNKVDTPAGITFTQASAGASYCLALGS 1036
Query: 230 MGQVWGWGYGGEGQLG 245
G ++ WG +GQLG
Sbjct: 1037 DGNLYSWGDNAKGQLG 1052
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 19/120 (15%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P LV GV T+V+ G H L + G ++ WG +G+LG R + TP P
Sbjct: 208 TPSLVNPPTGVHFTQVSTGYTHFLAIGSDGNLYSWGNNADGELG---RETVSTTPKDNPQ 264
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR-HSAVVTDAGALLTFGWGLYGQ 320
++ ++P LV + AG + + AC G+ HS + G L ++G YG+
Sbjct: 265 ID------NQPKLV-------TPPAGVHFTQ--ACAGKWHSLALGSDGNLYSWGENKYGE 309
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 102/309 (33%), Gaps = 94/309 (30%)
Query: 39 LSPIPAR---LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
L+P PAR + D GG + A G L TWG T+ K P
Sbjct: 700 LTPPPARGIRISQAD-------GGDLHSAAVGSDGSLYTWGDNSHGQLGRDTADKPDSHP 752
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
P + V +AG+ V++ G +Y+WG
Sbjct: 753 SKAEAPAGVTFVHVSAGYGFSVALASDGSLYSWG-------------------------- 786
Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
D G+ + R TS+ NPA+ P V G+
Sbjct: 787 -------------DNSRGQ--LGRTVTSN------NPAN-------RPHKVEAPAGITFV 818
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGL-------GSRIKMVPTPHLIPCLEHAASG 268
+ +AGG H + LS G ++ WG GQLG + TP + +A
Sbjct: 819 QASAGGSHVVALSSDGNIYTWGDNSAGQLGRTVTSNNPADKPGKADTPADVTFTSVSAGQ 878
Query: 269 KDRPLLVRQGSV-----NSSGKAGRSYVK------------------EIACGGRHSAVVT 305
+ QG V N+ G+ GRS + + G HS V+
Sbjct: 879 GHTVAVDTQGDVYTWGDNTHGELGRSTTSTPADKPGKADTPAGITFTQASAGESHSVAVS 938
Query: 306 DAGALLTFG 314
D G++ T+G
Sbjct: 939 DDGSIYTWG 947
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 89/267 (33%), Gaps = 82/267 (30%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA---AGWAH 115
G +++A G L +WG + G P + A V K AG
Sbjct: 341 GTFYSMALDSDGDLYSWGDNTYDELGRYAGGYPFRDRSPRKMTMPAGVKKFTWIKAGEWT 400
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
++ + G +Y+WGW E +G G
Sbjct: 401 SLATSSDGSLYSWGWNE----------YGQLG---------------------------- 422
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV-KITKVAAGGRHTLILSDMGQVW 234
R T+ AR++ +P VT+ GV K TKV+A RH+L L G ++
Sbjct: 423 ----RNTAPARQDR------------TPRKVTMPAGVTKFTKVSAEHRHSLALGSDGNLY 466
Query: 235 GWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
WG QLG + K P +P AG + E
Sbjct: 467 SWGLNDCKQLGRDTGSAKYDVKPGKVPT-----------------------PAGVAQFTE 503
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQ 320
++ G HS + G L ++G YG+
Sbjct: 504 VSAGYSHSLAIGSDGNLYSWGQNKYGE 530
>gi|320162832|gb|EFW39731.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 591
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 114/314 (36%), Gaps = 58/314 (18%)
Query: 22 VYMWGYLPGT-----SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWG 76
VY WG GT E+ P SP G K +C G G +A + SG++ +WG
Sbjct: 161 VYTWG--EGTRGMLGHGEEDPEASPRVVEALLGHDIKMLCLGS-GHTMALAVSGEVYSWG 217
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
+ TP + A H V+V + GE Y WG
Sbjct: 218 LGLGGRLGQGRE-RDRFTPLRLAGLRGFDITHIACNENHSVAVADNGEAYVWGR------ 270
Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASG- 195
G GS + G + PT+ KR T E E A G
Sbjct: 271 -------GIDGSLGVE--GDKHVSPTQIHALDGKRVVHAACGAAFTLFVIESGEVYACGN 321
Query: 196 DEFFTL---------SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
+E L P LVT P +I ++A G H + LS+ G+++ WG GQLG+
Sbjct: 322 NEHGQLGIGSNEAMSEPTLVTNLPE-RIVRIACGNSHAVALSETGRLYAWGAHSSGQLGV 380
Query: 247 GSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
G PL R V R V + ACGG H+ ++++
Sbjct: 381 GE-----------------------PLEDRLSPVRVESNVVRDDVADFACGGNHTIILSN 417
Query: 307 AGALLTFGWGLYGQ 320
+G L FG G GQ
Sbjct: 418 SGLLYAFGSGAQGQ 431
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 111/296 (37%), Gaps = 71/296 (23%)
Query: 43 PARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
P RL G + D+ C ++A +++G+ WG D G + KH +P
Sbjct: 235 PLRLAGLRGF-DITHIACNENHSVAVADNGEAYVWGRGID-GSLGVEGDKH-VSPTQIHA 291
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE-------------------CVPSAKVTR 141
VV AA G A + V E+GEVY G E +P V
Sbjct: 292 LDGKRVVHAACGAAFTLFVIESGEVYACGNNEHGQLGIGSNEAMSEPTLVTNLPERIVRI 351
Query: 142 DFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL 201
G++ + TG+ A + GE + R S R ES N D
Sbjct: 352 ACGNSHAVALSETGRLYAWGAHSS--GQLGVGEPLEDR--LSPVRVES-NVVRDD----- 401
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIP 260
+ A GG HT+ILS+ G ++ +G G +GQLGLG K TP +P
Sbjct: 402 ------------VADFACGGNHTIILSNSGLLYAFGSGAQGQLGLGPLATKNQATPAALP 449
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
E GR Y I+CG SA V+D G + T+G G
Sbjct: 450 NPE-----------------------GRKYTA-ISCGQDISAAVSDRGKIYTWGSG 481
>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
Length = 368
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 127/323 (39%), Gaps = 80/323 (24%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG ++ E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGN--HSVFLLEDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQA---PPSDKRAGEEVVKRRKTSSAREESENPASG 195
S G+ + TE + P ++ ++ + + S A+
Sbjct: 110 ------------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAAD 155
Query: 196 DEFFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
+FFT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 156 GQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWG 215
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
GQLGL H+ LL Q V I+CG
Sbjct: 216 MNNAGQLGLSDEKDRESPCHV-------------KLLRTQ------------KVVYISCG 250
Query: 298 GRHSAVVTDAGALLTFGWGLYGQ 320
H+AV+T +G + TFG G GQ
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQ 273
>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
gi|194702882|gb|ACF85525.1| unknown [Zea mays]
gi|224030327|gb|ACN34239.1| unknown [Zea mays]
gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 443
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 104/274 (37%), Gaps = 53/274 (19%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP-----FPLPTEASVVKAAAGW 113
G ++A L +WG +D GQ L G + P F P SV+ G
Sbjct: 21 GASHSVALLTGNVLCSWGRGED-GQ--LGHGDAEDRLVPTVLSGFDAPAITSVI---CGA 74
Query: 114 AHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAP 166
H + +E +VY+WGW DFG G F L +Q
Sbjct: 75 DHTTAYSEDELQVYSWGWG----------DFGRLGHGNSSDVFTPQPVKALQGLKIKQIA 124
Query: 167 PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
D + S R ++ G +L P + V + +AAG HT
Sbjct: 125 CGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAA 184
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
+++ G ++GWG+G G LGLG R L+P + G+ L
Sbjct: 185 VTEDGDLYGWGWGRYGNLGLGDR-----NDRLLPEKVSSVEGEKMVL------------- 226
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ACG RH+ V+D+G L T+GW YGQ
Sbjct: 227 -------VACGWRHTITVSDSGNLYTYGWSKYGQ 253
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 98/244 (40%), Gaps = 63/244 (25%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
TP+P + + A G +HC++VT AGEV +WG ++
Sbjct: 108 TPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWG---------------------RNQ 146
Query: 154 TGKQSALPTEQAP-PSDKRAGEEVVKR------RKTSSAREESE----------NPASGD 196
G+ TE + P +A E V + T++ E+ + N GD
Sbjct: 147 NGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGD 206
Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
L P V+ G K+ VA G RHT+ +SD G ++ +G+ GQLG G + P
Sbjct: 207 RNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHL-VP 265
Query: 257 HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
H + L KD S + +I+ G RH+ +T G L +GW
Sbjct: 266 HKVEAL------KD------------------STISQISGGWRHTMALTSEGKLYGWGWN 301
Query: 317 LYGQ 320
+GQ
Sbjct: 302 KFGQ 305
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 125/315 (39%), Gaps = 54/315 (17%)
Query: 19 ETVVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
E VY WG + S + +P P + G K + G LA + +G++ +W
Sbjct: 84 ELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDS-HCLAVTMAGEVQSW 142
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP 135
G + GQ L + + P+ V AAG H +VTE G++Y WGW
Sbjct: 143 GR-NQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGR--- 198
Query: 136 SAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----- 190
+G+ G ++ LP + + ++ R T + +
Sbjct: 199 -------YGNLGLGDRN----DRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYG 247
Query: 191 -----NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
GD L P V I++++ G RHT+ L+ G+++GWG+ GQ+G
Sbjct: 248 WSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVG 307
Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+G+ +H++ G Q S K + ++ACG RH+ ++
Sbjct: 308 VGNND------------DHSSPG--------QVSFPEDQK-----ISQVACGWRHTLALS 342
Query: 306 DAGALLTFGWGLYGQ 320
+ + ++G G GQ
Sbjct: 343 EKKNVFSWGRGTSGQ 357
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 82/214 (38%), Gaps = 26/214 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G A +E G L WG G L PE +V A GW H ++
Sbjct: 178 GAEHTAAVTEDGDLYGWGWGR-YGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTIT 236
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
V+++G +YT+GW + +G G + +P + D +
Sbjct: 237 VSDSGNLYTYGWSK----------YGQLGH----GDFEDHLVPHKVEALKDSTISQISGG 282
Query: 179 RRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
R T + E + G+ SP V+ KI++VA G RHTL LS
Sbjct: 283 WRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPEDQKISQVACGWRHTLALS 342
Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
+ V+ WG G GQLG G + TP LI L
Sbjct: 343 EKKNVFSWGRGTSGQLGNGEIVDR-NTPVLIDAL 375
>gi|159038540|ref|YP_001537793.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157917375|gb|ABV98802.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 579
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 116/301 (38%), Gaps = 53/301 (17%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT+ + S SP+ + G + V GG G +LA + +G + WG D L G
Sbjct: 76 GTTTDSS---SPVSVNVPAGTTITAVAGG-AGHSLAVTSAGTALAWG---DNAFGQLGDG 128
Query: 90 K---HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WRECVPSAKVTRDF 143
TP +P +V + G H ++VT AG WG W +
Sbjct: 129 TTIPSSSTPVAVDVPAGTTVTALSGGGVHNLAVTSAGTALAWGDNFWGQL---------- 178
Query: 144 GSAGSFQKDSTGKQSALP--TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL 201
GS + T +P T + + V T+ A ++ + GD T
Sbjct: 179 -GDGSTTRSRTPVAVNVPAGTTITAVAAGQGHSLAVTSAGTALAWGDNSSGQLGDGTATD 237
Query: 202 S--PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
S P + G IT VAAGG H+L L+ G V WG G GQLG G+
Sbjct: 238 SSIPVAADVPAGTTITAVAAGGLHSLALTSGGDVLAWGANGSGQLGDGTTTS-------- 289
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
P+ V AG + V +A GGRHS VT AG +L +G G
Sbjct: 290 ---------SSTPVAVDV-------PAGTT-VTAVAAGGRHSLAVTSAGDVLAWGDNTAG 332
Query: 320 Q 320
Q
Sbjct: 333 Q 333
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 108/296 (36%), Gaps = 61/296 (20%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDE-GQSYLTSGKHGETPEPF 98
+P+ + G + + GGG LA + +G + WG D+ GQ S TP
Sbjct: 136 TPVAVDVPAGTTVTALSGGGV-HNLAVTSAGTALAWG--DNFWGQLGDGSTTRSRTPVAV 192
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS 158
+P ++ AAG H ++VT AG WG S+G D T S
Sbjct: 193 NVPAGTTITAVAAGQGHSLAVTSAGTALAWGDN-------------SSGQL-GDGTATDS 238
Query: 159 ALPTEQAPPSDKRAGEEVVKRRK--------TSSAR------EESENPASGDEFFTLSPC 204
++P +D AG + TS S G + +P
Sbjct: 239 SIPVA----ADVPAGTTITAVAAGGLHSLALTSGGDVLAWGANGSGQLGDGTTTSSSTPV 294
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
V + G +T VAAGGRH+L ++ G V WG GQLG GS
Sbjct: 295 AVDVPAGTTVTAVAAGGRHSLAVTSAGDVLAWGDNTAGQLGDGSTTH------------- 341
Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P+ V AG + + +A G HS VT L +G +GQ
Sbjct: 342 ----SSTPVAVNV-------PAGTT-ITAVATGSGHSLAVTSTDTALAWGDNTFGQ 385
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 88/241 (36%), Gaps = 30/241 (12%)
Query: 24 MWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQ 83
WG L S +S +P+ + G + V G G +LA + +G + WG + GQ
Sbjct: 174 FWGQLGDGSTTRS--RTPVAVNVPAGTTITAVAAG-QGHSLAVTSAGTALAWGD-NSSGQ 229
Query: 84 SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDF 143
+ P +P ++ AAG H +++T G+V WG
Sbjct: 230 LGDGTATDSSIPVAADVPAGTTITAVAAGGLHSLALTSGGDVLAWGAN------------ 277
Query: 144 GSAGSFQK-DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF---- 198
GS Q D T S+ P P+ R + + + A GD
Sbjct: 278 ---GSGQLGDGTTTSSSTPVAVDVPAGTTVTAVAAGGRHSLAVTSAGDVLAWGDNTAGQL 334
Query: 199 ------FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+ +P V + G IT VA G H+L ++ WG GQLG GS
Sbjct: 335 GDGSTTHSSTPVAVNVPAGTTITAVATGSGHSLAVTSTDTALAWGDNTFGQLGDGSTTSS 394
Query: 253 V 253
+
Sbjct: 395 I 395
>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
boliviensis boliviensis]
Length = 1050
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 131/332 (39%), Gaps = 79/332 (23%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
WGY P S L I A ++CG S + V CG ++ E G++ T G +
Sbjct: 4 WGYWSLGQPGISTSLQGIVAEPQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCG-LNT 62
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
+GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 63 KGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA---------- 110
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
GS G +T A+P ++ ++ + + S A+ +FFT
Sbjct: 111 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 160
Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
SP V G+ + +VAAGG H+ LS G V+GWG G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
QLGL KDR P V+ V I+CG H
Sbjct: 221 QLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGEEH 253
Query: 301 SAVVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
+AV+T +G + TFG G GQ L D +N
Sbjct: 254 TAVLTKSGGVFTFGAGSCGQ-----LGHDSMN 280
>gi|348575702|ref|XP_003473627.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cavia
porcellus]
Length = 1080
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 84/318 (26%), Positives = 126/318 (39%), Gaps = 64/318 (20%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECV---------PSAKVTRDFGSAGSFQKDSTGK 156
+++ + G+VY WG EC+ P K R +K ++ K
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRKSIFMPVDKNIR----IKECKKTASRK 152
Query: 157 Q--SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASG---DEFFTLSPCLVTLNPG 211
S L +E AP S +V +++ G D SP L+ G
Sbjct: 153 SWVSTLCSELAPDSHLAESGQVAVSASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLG 212
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAA 266
+ +VAAGG H+ +L+ G ++GWG GQLGL P+L+ L +
Sbjct: 213 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPYLLKSLRSQKIVYIC 271
Query: 267 SGKDR-PLLVRQGSVNSSGKAGR----------------------SYVKEIACGGRH-SA 302
G+D L ++G V + G G S V +IACG +H SA
Sbjct: 272 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSA 331
Query: 303 VVTDAGALLTFGWGLYGQ 320
V +G + +FG G GQ
Sbjct: 332 FVPSSGRIYSFGLGGNGQ 349
>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
Length = 1909
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 81/317 (25%), Positives = 126/317 (39%), Gaps = 67/317 (21%)
Query: 22 VYMWGYLPGTSPEKSPILSP------IPARLCGGDSWKDVCGGGCGF--ALATSESGKLI 73
VYMWG +P + P +P +L +S D+ GF + A +G+L+
Sbjct: 655 VYMWGRGSVKNPPVPVLGIPQIEDQLLPIKL---ESLTDIVVVSIGFYHSAAVRANGELL 711
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGEVYTWGWR 131
TWG + EGQ L G EP + + S + + G H + +T+ G+VYTWG
Sbjct: 712 TWGVGE-EGQ--LGHGDTQNQVEPKVIQSLTSFWITQVQCGEKHTICLTKNGKVYTWG-- 766
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE--------QAPPSDKRAGEEVVKRRKTS 183
+ ++G G D+T +P Q +
Sbjct: 767 --------SSEYGQLG--LGDTTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNSKEVLV 816
Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
+ AS TL P L L+ I K+ G T +S+ G V+ WG G E
Sbjct: 817 FGNGAAMGAASIISIPTLVPSLKYLH----IDKLCCGHYSTAAISECGDVYTWGTGQE-- 870
Query: 244 LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
LG G+ + TP L+ L + + +++I+CGGRH+A
Sbjct: 871 LGHGNN-QTESTPKLVEALRNQS------------------------IRQISCGGRHTAF 905
Query: 304 VTDAGALLTFGWGLYGQ 320
+TD+G + T G +GQ
Sbjct: 906 LTDSGRIFTSGKDSFGQ 922
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 65/260 (25%), Positives = 104/260 (40%), Gaps = 36/260 (13%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT--EASVVKAAAGWAHCVSVT 120
A+ S L+TWGSA + + + K P P LP + + ++G + ++T
Sbjct: 591 AIHLDTSRGLMTWGSASNCKLGFKVASKEQSQPTPERLPNFNVSDICSISSGSYYSAALT 650
Query: 121 EAGEVYTWGWREC----VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
E G+VY WG VP + + + +S + + RA E+
Sbjct: 651 ENGDVYMWGRGSVKNPPVPVLGIPQIEDQLLPIKLESLTDIVVVSIGFYHSAAVRANGEL 710
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ T EE + GD + P ++ IT+V G +HT+ L+ G+V+ W
Sbjct: 711 L----TWGVGEEGQ-LGHGDTQNQVEPKVIQSLTSFWITQVQCGEKHTICLTKNGKVYTW 765
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G GQLGLG + P + LE + V +IA
Sbjct: 766 GSSEYGQLGLGDTTRYC-KPMPVTALE------------------------KYNVLQIAS 800
Query: 297 GGRHSAVVTDAGALLTFGWG 316
G H AV+T++ +L FG G
Sbjct: 801 GSTHCAVLTNSKEVLVFGNG 820
>gi|15237253|ref|NP_197108.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|9755650|emb|CAC01803.1| UVB-resistance protein-like [Arabidopsis thaliana]
gi|114213505|gb|ABI54335.1| At5g16040 [Arabidopsis thaliana]
gi|332004857|gb|AED92240.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 396
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 115/306 (37%), Gaps = 60/306 (19%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +LA + GKL TWG + K TP +V+AA G HC+
Sbjct: 45 GGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCL 104
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF-QKDSTGKQSALPTEQAPPSDKRAGEEV 176
+V + G Y WG E +G G KD TG+ P + KR +++
Sbjct: 105 AVDDQGRAYAWGGNE----------YGQCGEEPSKDETGR----PVRRDIVIPKRCAQQL 150
Query: 177 VKRRK----TSSAREESENPA--------SGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
R+ T S E GD P V V++ +A G H
Sbjct: 151 TVRQVAAGGTHSVVLTREGYVWTWGQPWPPGDIKQISVPVRVQGLENVRL--IAVGAFHN 208
Query: 225 LILSDMGQVWGWGYGGEGQLGLGS---RIKMVPTPHL--IPCLEHAASGKDRPLLVRQGS 279
L L + G +W WG GQLG G R +P L + ++ AA G L +G
Sbjct: 209 LALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGE 268
Query: 280 VNSSGK-------------------------AGRSYVKEIACGGRHSAVVTDAGALLTFG 314
V G+ AG + +++CGG HS +T G + +FG
Sbjct: 269 VYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDII-QVSCGGTHSVALTRDGRIFSFG 327
Query: 315 WGLYGQ 320
G +G+
Sbjct: 328 RGDHGR 333
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 15/114 (13%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI---KM 252
D+ + P V L G I +V+ GG H++ L+ G+++ +G G G+LG G ++ +
Sbjct: 286 DKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQP 345
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+ P IP E + D G+ K +ACGGRH+ + +
Sbjct: 346 LELPIHIPPPEGRFNHTDEE------------DDGKWIAKHVACGGRHTLAIVE 387
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 62/156 (39%), Gaps = 40/156 (25%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
DE L+ + L P + V G R++L + D G+++ WG+ G LG K T
Sbjct: 23 DEEKELASVVDALEP-FNVRSVVGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTEST 81
Query: 256 PHLIPCL------------------------------EHAASGKD-------RPLLVRQG 278
P L+ L E+ G++ RP VR+
Sbjct: 82 PSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRP--VRRD 139
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
V A + V+++A GG HS V+T G + T+G
Sbjct: 140 IVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWG 175
>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Taeniopygia guttata]
Length = 1050
Score = 65.9 bits (159), Expect = 3e-08, Method: Composition-based stats.
Identities = 68/266 (25%), Positives = 108/266 (40%), Gaps = 33/266 (12%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTEASVVKAAAGWAH 115
CG ++A S+ G+L +WG+ D GQ LT+ + T P + ++++ + G H
Sbjct: 90 ACGESHSVALSDQGQLFSWGAGSD-GQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWH 148
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
C+++ G+ +TWG + + ++ S S Q+ +P Q +
Sbjct: 149 CLALAADGQFFTWG-QNSYGQLGLGKECPSQASPQR--VKSLDGIPLAQVAAGGAHSFAL 205
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ + S DE SPC V L K+ ++ G HT +L+ G V+
Sbjct: 206 SLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
+G G GQLG S V R +L G S V +IA
Sbjct: 266 FGAGSCGQLGHDSMNDEV---------------NPRRVLELMG----------SEVSQIA 300
Query: 296 CGGRHS-AVVTDAGALLTFGWGLYGQ 320
CG H+ A V +G + FG G GQ
Sbjct: 301 CGRHHTLAFVPSSGMIYAFGCGTRGQ 326
Score = 54.7 bits (130), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 24/110 (21%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G I VA G H++ LSD GQ++ WG G +GQLGL + V P LI
Sbjct: 83 GQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIK---------- 132
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
K + + +++CG H + G T+G YGQ
Sbjct: 133 --------------KLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQ 168
Score = 44.3 bits (103), Expect = 0.077, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 27/112 (24%)
Query: 236 WGYGGEGQLGLGSRIK-MVPTPHLIPCL------EHAASGKDRPLLVRQGSV-----NSS 283
WGY GQ G+GS ++ ++P P + + E A G L+ G V N+
Sbjct: 4 WGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 284 GKAGR---------------SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G+ G ++ +ACG HS ++D G L ++G G GQ
Sbjct: 64 GQLGHDCEGSKPEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQ 115
>gi|345325025|ref|XP_001513851.2| PREDICTED: RCC1 and BTB domain-containing protein 1
[Ornithorhynchus anatinus]
Length = 531
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 106/294 (36%), Gaps = 87/294 (29%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT +S I+ P L G K + G L ++E G + WG G S L +G
Sbjct: 55 GTGDNQSTIV-PKKLELLSGKKIKSLSYGSGPHVLLSTEDGIVYAWGH---NGYSQLGNG 110
Query: 90 KHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
+ P + T V + A G H +++ + GEVY WG+ C G
Sbjct: 111 TTNQGIAPIQICTNLMIKQVTEVACGSHHSMALADDGEVYAWGYNNC----------GQV 160
Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLV 206
GS ST Q P K +KR
Sbjct: 161 GS---GSTANQ--------PTPRKVTNCLHIKR--------------------------- 182
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA 266
+ +A G ++ + D G+V+GWGY G GQLGLG+ L PC
Sbjct: 183 -------VVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNN-----GNQLTPC----- 225
Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
R +++S V +I CG H+ +TD G L +G YGQ
Sbjct: 226 ---------RVAALHSVC------VLQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S P P ++ K V CG ++A ++G++ WG
Sbjct: 149 VYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L + + TP V++ G+AH +++T+ G +Y WG
Sbjct: 208 NGNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWG 258
>gi|198415420|ref|XP_002129368.1| PREDICTED: similar to regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1 [Ciona
intestinalis]
Length = 554
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 83/201 (41%), Gaps = 32/201 (15%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETP--EPFPLPTEAS--VVKAAAGWAHCVS 118
L ++ G + +WG SY+ G G +P P L S VV+ A G H ++
Sbjct: 111 VLVLTQDGGVYSWGH-----NSYMQLGNGGTSPGTSPSLLSRNISNKVVQIACGSHHSMA 165
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+T GEVYTWG+ C G GS ST Q + A +KR +
Sbjct: 166 LTTEGEVYTWGYNNC----------GQIGS---GSTANQGSPRKVTACIGNKRIIDITCG 212
Query: 179 RRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + + E G+ +PC V GV I +V G H L L+
Sbjct: 213 QTTSLCVTDSGEVYSWGYNGNGQLGVGNNVNQTNPCRVAALQGVVIAQVVCGYAHALALT 272
Query: 229 DMGQVWGWGYGGEGQLGLGSR 249
D G V+GWG GQLG G++
Sbjct: 273 DNGVVFGWGANSYGQLGSGNK 293
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 56/127 (44%), Gaps = 26/127 (20%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD +L P L+ G KI ++AG G H L+L+ G V+ WG+ QLG G
Sbjct: 81 GDNSSSLEPRLLESFSGQKIISLSAGSGPHVLVLTQDGGVYSWGHNSYMQLGNGG----- 135
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
+ G LL R N S K V +IACG HS +T G + T+
Sbjct: 136 -----------TSPGTSPSLLSR----NISNK-----VVQIACGSHHSMALTTEGEVYTW 175
Query: 314 GWGLYGQ 320
G+ GQ
Sbjct: 176 GYNNCGQ 182
>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
Length = 853
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 119/317 (37%), Gaps = 91/317 (28%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
++ +L P + +DV GCG + + G + T G +D GQ L K
Sbjct: 18 DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
+ PE ++V + G AH +++ + G+VY WG
Sbjct: 72 RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
DS G+ L EE ++ + + +
Sbjct: 111 DSDGQLGLL-----------GSEECIRVPRNIKSLSD----------------------- 136
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG K +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAA 256
Query: 304 VTDAGALLTFGWGLYGQ 320
+T G + TFG G YGQ
Sbjct: 257 LTKEGGVFTFGAGGYGQ 273
>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Ovis aries]
Length = 979
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 120/317 (37%), Gaps = 91/317 (28%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
++ +L P + +DV GCG + + G + T G +D GQ L K
Sbjct: 18 DEEIVLEPRKSDFFVNKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
+ PE ++V + G AH +++ + G+VY WG
Sbjct: 72 RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
DS G+ L +E+ V + K+ S
Sbjct: 111 DSDGQLGLLGSEECI--------RVPRNIKSLS--------------------------D 136
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG K +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAA 256
Query: 304 VTDAGALLTFGWGLYGQ 320
+T G + TFG G YGQ
Sbjct: 257 LTKEGGVFTFGAGGYGQ 273
>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
Length = 434
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 104/277 (37%), Gaps = 59/277 (21%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA +G ++WG +D GQ + + P +AS +G + V+
Sbjct: 22 GSSHSLALLSNGIALSWGRGED-GQLGHGDAEERKKPRAIFHLMQASCSAVCSGAEYSVA 80
Query: 119 VTE-AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
+++ EVY+WGW G F + G + + Q P AG +V
Sbjct: 81 LSQPRNEVYSWGW----------------GDFGRLGHGDCNDVFIPQ--PIRALAGRNIV 122
Query: 178 KR--------------RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
K S R ++ G + P V G ++T +A GG H
Sbjct: 123 KVACGDTHTLAVTDTGELFSFGRNQNGQLGLGTTSDAILPQPVESLRGQEVTSIACGGEH 182
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
+L + G V+ WG+G G LG+G P +P H G
Sbjct: 183 SLAATSAGDVFAWGWGRYGNLGVGP-----PEDRHLPSQVHGLEGVK------------- 224
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V +ACG RHS + GA+ TFGW YGQ
Sbjct: 225 -------VTSVACGWRHSIAADETGAVYTFGWSKYGQ 254
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 117/314 (37%), Gaps = 93/314 (29%)
Query: 38 ILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
+ P P R G +++ CG LA +++G+L ++G + GQ L + P
Sbjct: 107 VFIPQPIRALAG---RNIVKVACGDTHTLAVTDTGELFSFGR-NQNGQLGLGTTSDAILP 162
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
+P V A G H ++ T AG+V+ WGW +G+ G
Sbjct: 163 QPVESLRGQEVTSIACGGEHSLAATSAGDVFAWGWGR----------YGNLGV------- 205
Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
PP D+ P V GVK+T
Sbjct: 206 ---------GPPEDRHL------------------------------PSQVHGLEGVKVT 226
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE------------ 263
VA G RH++ + G V+ +G+ GQLG G I + P + L+
Sbjct: 227 SVACGWRHSIAADETGAVYTFGWSKYGQLGHGDCIDQL-VPKAVESLKDSRIVLIAGGWR 285
Query: 264 HAASGKDRPLLVRQGSVNSSGKAG-----------------RSYVKEIACGGRHSAVVTD 306
H ++ D L G N G+ G S VK ++CG RH+ VT+
Sbjct: 286 HTSAADDSGKLYSWG-WNKFGQLGIGSNTDSNAPVPVQGLNTSPVKLLSCGWRHTFAVTE 344
Query: 307 AGALLTFGWGLYGQ 320
AG + ++G G+ GQ
Sbjct: 345 AGDVFSWGRGVNGQ 358
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 57/132 (43%), Gaps = 10/132 (7%)
Query: 50 DSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
DS + GG A +SGKL +WG + GQ + S P P + V
Sbjct: 274 DSRIVLIAGGWRHTSAADDSGKLYSWG-WNKFGQLGIGSNTDSNAPVPVQGLNTSPVKLL 332
Query: 110 AAGWAHCVSVTEAGEVYTWGW---------RECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
+ GW H +VTEAG+V++WG +A V S GS + + G ++
Sbjct: 333 SCGWRHTFAVTEAGDVFSWGRGVNGQLGHNEPKDTNAPVRLAELSMGSIKLEDLGVSASP 392
Query: 161 PTEQAPPSDKRA 172
T PP+D+ A
Sbjct: 393 LTTYVPPADRYA 404
>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
[Felis catus]
Length = 621
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 119/317 (37%), Gaps = 91/317 (28%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
++ +L P + +DV GCG + + G + T G +D GQ L K
Sbjct: 18 DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
+ PE ++V + G AH +++ + G+VY WG
Sbjct: 72 RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
DS G+ L EE ++ + + +
Sbjct: 111 DSDGQLGLL-----------GSEECIRVPRNIKSLSD----------------------- 136
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG K +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAA 256
Query: 304 VTDAGALLTFGWGLYGQ 320
+T G + TFG G YGQ
Sbjct: 257 LTKEGGVFTFGAGGYGQ 273
>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
Length = 1504
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 131/332 (39%), Gaps = 79/332 (23%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
WGY P S L I A ++CG + + V CG ++ E G++ T G +
Sbjct: 458 WGYWSLGQPGISSNLQGIVAEPQVCGFIADRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 516
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
+GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 517 KGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGA---------- 564
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
GS G +T A+P ++ ++ + + S A+ +FFT
Sbjct: 565 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 614
Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
SP V G+ + +VAAGG H+ LS G V+GWG G
Sbjct: 615 WGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 674
Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
QLGL KDR P V+ V I+CG H
Sbjct: 675 QLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGEEH 707
Query: 301 SAVVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
+AV+T +G + TFG G GQ L D +N
Sbjct: 708 TAVLTKSGGVFTFGAGSCGQ-----LGHDSMN 734
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 109/271 (40%), Gaps = 31/271 (11%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+ + CG +LA S+ G+L +WG+ D +T+ P + ++++ +
Sbjct: 538 QHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVS 597
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G HC+++ G+ +TWG + + ++F S S Q+ + + +P Q
Sbjct: 598 CGNWHCLALAADGQFFTWG-KNSHGQLGLGKEFPSQTSPQRVRSLE--GIPLAQVAAGGA 654
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
+ + + DE SPC V L K+ ++ G HT +L+
Sbjct: 655 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 714
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
G V+ +G G GQLG S V R +L G S
Sbjct: 715 GGVFTFGAGSCGQLGHDSMNDEV---------------NPRRVLELMG----------SE 749
Query: 291 VKEIACGGRHS-AVVTDAGALLTFGWGLYGQ 320
V +IACG +H+ A V +G + FG G GQ
Sbjct: 750 VTQIACGRQHTLAFVPSSGLIYAFGCGARGQ 780
>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
Length = 1027
Score = 65.9 bits (159), Expect = 3e-08, Method: Composition-based stats.
Identities = 77/306 (25%), Positives = 123/306 (40%), Gaps = 63/306 (20%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRH-SAVVTDAGALLTFG 314
G V + G G S V EIACG +H S V +G + +FG
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSTFVPSSGRIYSFG 320
Query: 315 WGLYGQ 320
G GQ
Sbjct: 321 LGGNGQ 326
>gi|159037224|ref|YP_001536477.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157916059|gb|ABV97486.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 558
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 101/275 (36%), Gaps = 38/275 (13%)
Query: 50 DSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
D+ GG +LA + +G ++ WG ++ GQ + + P LP + +VV
Sbjct: 89 DTTVTAVAGGDSHSLALTSAGAVLAWGE-NNFGQLGTGNNLNSSVPITVALPPDTTVVAI 147
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
AA H +++T AG V WG A G+ +F + T LP +
Sbjct: 148 AASHGHSLALTSAGAVLAWG-------ANNVGQLGNGNTFNSN-TPVTVNLPPGTTVATI 199
Query: 170 KRAGEEVVKRRKTSSARE----ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
+ T +A + + +L P VTL P IT +AAG ++L
Sbjct: 200 AAGTNHSLAITSTGAALAWGGNGNGQLGNNSTATSLEPIAVTLPPSTTITAIAAGSSYSL 259
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
++ G WG GQLG G+ LIP G
Sbjct: 260 AITSTGTALAWGGNSNGQLGTGNNAD-----SLIPIAVALPPG----------------- 297
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ + IA G HS VT G L +G GQ
Sbjct: 298 ---TTITSIAAGFTHSLAVTSTGTALAWGGNSRGQ 329
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 80/195 (41%), Gaps = 13/195 (6%)
Query: 61 GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
G +LA + +G ++ WG A++ GQ + + TP LP +V AAG H +++T
Sbjct: 152 GHSLALTSAGAVLAWG-ANNVGQLGNGNTFNSNTPVTVNLPPGTTVATIAAGTNHSLAIT 210
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
G WG + +A S + + LP + +
Sbjct: 211 STGAALAWGGNGN----GQLGNNSTATSLEPIAV----TLPPSTTITAIAAGSSYSLAIT 262
Query: 181 KTSSAR----EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
T +A + +G+ +L P V L PG IT +AAG H+L ++ G W
Sbjct: 263 STGTALAWGGNSNGQLGTGNNADSLIPIAVALPPGTTITSIAAGFTHSLAVTSTGTALAW 322
Query: 237 GYGGEGQLGLGSRIK 251
G GQLG+G+
Sbjct: 323 GGNSRGQLGIGTTTN 337
>gi|242004863|ref|XP_002423296.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
gi|212506298|gb|EEB10558.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
Length = 1229
Score = 65.9 bits (159), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 25/126 (19%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GD + + P L+T + ++ G HTL L++ GQV+ WG+G GQLGLG+ +
Sbjct: 911 GDVYESPYPRLITSLANENVITLSCGQFHTLALTEKGQVFAWGWGVHGQLGLGN----ID 966
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
L C+ H KD+ +K+IA G HS V++D G + +FG
Sbjct: 967 DQRLPVCVNHL---KDQ------------------VIKDIAAGHGHSLVLSDKGQIFSFG 1005
Query: 315 WGLYGQ 320
G++GQ
Sbjct: 1006 SGVFGQ 1011
Score = 58.9 bits (141), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 18/107 (16%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
I +AAG H+L+LSD GQ++ +G G GQLG G+ K +P L S ++ +
Sbjct: 982 IKDIAAGHGHSLVLSDKGQIFSFGSGVFGQLGTGNTTKSS-----VPVLIQGIS--EKII 1034
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
L+ G Y I+CG HSA++T +G + T+G L GQ
Sbjct: 1035 LIATG-----------YFHSISCGCHHSALLTVSGGVYTWGRSLDGQ 1070
>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
Length = 1049
Score = 65.9 bits (159), Expect = 3e-08, Method: Composition-based stats.
Identities = 77/306 (25%), Positives = 123/306 (40%), Gaps = 63/306 (20%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V A G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVACGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLQGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCQKQT------------SPQLIKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRH-SAVVTDAGALLTFG 314
G V + G G S V ++ACG +H SA V +G + +FG
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFG 320
Query: 315 WGLYGQ 320
G GQ
Sbjct: 321 LGGNGQ 326
>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
Length = 1057
Score = 65.9 bits (159), Expect = 3e-08, Method: Composition-based stats.
Identities = 77/306 (25%), Positives = 123/306 (40%), Gaps = 63/306 (20%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V A G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVACGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLQGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCQKQT------------SPQLIKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRH-SAVVTDAGALLTFG 314
G V + G G S V ++ACG +H SA V +G + +FG
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFG 320
Query: 315 WGLYGQ 320
G GQ
Sbjct: 321 LGGNGQ 326
>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
impatiens]
Length = 1088
Score = 65.9 bits (159), Expect = 3e-08, Method: Composition-based stats.
Identities = 48/137 (35%), Positives = 67/137 (48%), Gaps = 35/137 (25%)
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL------------E 263
KVA G HT+ +++ GQ++ WG EGQLGL S+ M +P ++ L +
Sbjct: 120 KVACGAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMK 179
Query: 264 HAASGKDRPLLVRQGSVNSSGKAG-----RSYVKE-------------IACGGRHSAVVT 305
HA + + L GS NS G+ G RS VK IACGG HS ++
Sbjct: 180 HALALTNNGELYSWGS-NSEGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAIS 238
Query: 306 DAGALLTFGWG--LYGQ 320
+GA+ FGWG +GQ
Sbjct: 239 KSGAI--FGWGKNTFGQ 253
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 76/260 (29%), Positives = 108/260 (41%), Gaps = 30/260 (11%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWA 114
CG ALA + +G+L +WGS + EGQ L E +P + T A V A A G
Sbjct: 175 ACGMKHALALTNNGELYSWGS-NSEGQLGLGVDIRSEV-KPKLINTLAGVPIAFIACGGY 232
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT-EQAPPSDKRAG 173
H ++++++G ++ WG FG G + L T A G
Sbjct: 233 HSIAISKSGAIFGWG----------KNTFGQLGLNDTQNRNLPHQLQTLRNAKICYAACG 282
Query: 174 EE-----VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL- 227
EE V + G + P V G +T+++ G RHTL L
Sbjct: 283 EEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALV 342
Query: 228 SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAG 287
G+V+ WG GG GQLG S + +PTP ++ A +G L +Q S + G
Sbjct: 343 PSQGRVYAWGLGGAGQLGNNS-TRSIPTPQVVHGPWVAPNGSSMMDLDKQFSSCTVGYV- 400
Query: 288 RSYVKEIACGGRH--SAVVT 305
VK I GG H + VVT
Sbjct: 401 ---VKHIFTGGDHCFATVVT 417
Score = 45.1 bits (105), Expect = 0.051, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAAAGWAH 115
CG +A +E G+L +WGS + EGQ L S E +P + +V+ A G H
Sbjct: 122 ACGAYHTIAVNEWGQLFSWGS-NSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKH 180
Query: 116 CVSVTEAGEVYTWG 129
+++T GE+Y+WG
Sbjct: 181 ALALTNNGELYSWG 194
>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
Length = 1057
Score = 65.9 bits (159), Expect = 3e-08, Method: Composition-based stats.
Identities = 77/306 (25%), Positives = 123/306 (40%), Gaps = 63/306 (20%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V A G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVACGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLQGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCQKQT------------SPQLIKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRH-SAVVTDAGALLTFG 314
G V + G G S V ++ACG +H SA V +G + +FG
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFG 320
Query: 315 WGLYGQ 320
G GQ
Sbjct: 321 LGGNGQ 326
>gi|291401444|ref|XP_002717009.1| PREDICTED: hect domain and RLD 3-like [Oryctolagus cuniculus]
Length = 974
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 28/135 (20%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAAS 267
I ++ G H+L LS G+++ WG GQLG+G VPTP + +P ++ +A
Sbjct: 130 IIQITCGDYHSLALSKGGELFAWGQNSHGQLGIGVMCPSVPTPQIVEHLAGVPLVQISAG 189
Query: 268 GKDRPLLVRQGSVNSSGK----------------------AGRSYVKEIACGGRHSAVVT 305
L G+V S GK V+ +ACGG H+A++T
Sbjct: 190 EAHSMTLSMSGNVYSWGKNDLGQLGLGHTENKDSPCLIEALDNQKVEFVACGGSHTALLT 249
Query: 306 DAGALLTFGWGLYGQ 320
G L TFG G YGQ
Sbjct: 250 QDGQLFTFGAGKYGQ 264
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
SPCL+ K+ VA GG HT +L+ GQ++ +G G GQLG S+ + P L+
Sbjct: 223 SPCLIEALDNQKVEFVACGGSHTALLTQDGQLFTFGAGKYGQLGHKSKRNELK-PRLVTV 281
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI--ACGGRHSAVV 304
L + + + + +NS + R+ KE+ GG S ++
Sbjct: 282 L---VANRVTQIACGRTILNSDVEKSRTSEKELIMIAGGNQSILL 323
>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
abelii]
Length = 1049
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 77/306 (25%), Positives = 124/306 (40%), Gaps = 63/306 (20%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECI---RVPRNIKSLSDIQIVQVACGYCHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRH-SAVVTDAGALLTFG 314
G V + G G S V +IACG +H SA V +G + +FG
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFG 320
Query: 315 WGLYGQ 320
G GQ
Sbjct: 321 LGGNGQ 326
>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
garnettii]
Length = 1050
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 130/332 (39%), Gaps = 79/332 (23%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
WGY P S L I A ++CG S + V CG ++ E G++ T G +
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCG-LNT 62
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
+GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 63 KGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA---------- 110
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
GS G +T A+P ++ ++ + + S A+ +FFT
Sbjct: 111 ---GSDGQLGLTTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQFFT 160
Query: 201 ------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
SP V G+ + +VAAGG H+ LS G V+GWG G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
QLGL KDR P V+ V I+CG H
Sbjct: 221 QLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCGEEH 253
Query: 301 SAVVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
+AV+T G + TFG G GQ L D +N
Sbjct: 254 TAVLTKNGGVFTFGAGSCGQ-----LGHDSMN 280
>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pongo abelii]
Length = 1057
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 77/306 (25%), Positives = 124/306 (40%), Gaps = 63/306 (20%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECI---RVPRNIKSLSDIQIVQVACGYCHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRH-SAVVTDAGALLTFG 314
G V + G G S V +IACG +H SA V +G + +FG
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFG 320
Query: 315 WGLYGQ 320
G GQ
Sbjct: 321 LGGNGQ 326
>gi|340509251|gb|EGR34803.1| nd6 protein, putative [Ichthyophthirius multifiliis]
Length = 393
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 84/215 (39%), Gaps = 56/215 (26%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
+V G+ HC+ +T AGE+Y WG + +G G + ++Q
Sbjct: 125 LVDIKLGFYHCIGLTNAGEIYVWG----------SNQYGQHG------------ISSQQI 162
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
K + R SS +E+ + FF + + +T++A G + +
Sbjct: 163 LAQYKENSRFI---RHISSKELTTESFPTLVSFFDIKEQRI-------VTQIACGAEYCM 212
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
+ + V+ WG EGQLGLG V P + E LL++Q
Sbjct: 213 AIENKRTVYAWGKNTEGQLGLGFVTSFVEQPSKLSTFE--------GLLMKQ-------- 256
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ CG HS +TD+G + T G LYG+
Sbjct: 257 --------VECGENHSLFLTDSGKIYTCGSYLYGK 283
>gi|66801165|ref|XP_629508.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60462899|gb|EAL61096.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 455
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 135/343 (39%), Gaps = 56/343 (16%)
Query: 9 EENEKMEECKETVVYMWGYLP--GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
E+NE + VYMWG S P L + V GG F L
Sbjct: 99 EQNEN-DPTISNKVYMWGTNKSGNMSLPSEQYRFPTTIDLLKNTFVEKVIGGRS-FTLVL 156
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVY 126
+ GK++ +G ++ GQ L ++ P P ++ G H ++VT+AG V+
Sbjct: 157 TRDGKVLGFGE-NNFGQLGLGDTRNRTAPTPVETLNNQHIIDIGVGLDHSIAVTKAGHVF 215
Query: 127 TWGW-------RECVPSAKVT--------RDFGSAGSFQKDST-GKQSALPT-----EQA 165
WG+ ++ V ++ + G AGS ++ + LPT EQ
Sbjct: 216 GWGYNVEGQIGQKVVEYTRMNSTTEVMDGEEEGGAGSLREQMIPDVEYTLPTLVPGLEQI 275
Query: 166 PPSDKRAGEE---VVKRRKT--SSAREESENPASGDEF--FTLSPCLVTLN-PGVKITKV 217
S+ G + ++ R S E G E P + KI ++
Sbjct: 276 KISNVFCGYDSTFLLSARGNVYSFGSNEIGTLGLGSELKGRVTKPTKIKFTETNEKIKQL 335
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
++G HTL L+ G V+ G+G EG+LGLG S +D P L++
Sbjct: 336 SSGASHTLFLTSGGNVYSCGWGTEGRLGLG----------------MDTSNRDSPTLLKY 379
Query: 278 GSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ N + + ++A GG HS + D G + T+G G G+
Sbjct: 380 FNQN------KIKIVKVAAGGSHSMALDDQGRVYTWGNGSNGK 416
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
+KI KVAAGG H++ L D G+V+ WG G G+LG G+
Sbjct: 385 IKIVKVAAGGSHSMALDDQGRVYTWGNGSNGKLGHGN 421
>gi|443692774|gb|ELT94295.1| hypothetical protein CAPTEDRAFT_179088 [Capitella teleta]
Length = 394
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 67/138 (48%), Gaps = 20/138 (14%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPC 261
P V G+ +T V+AGG H+ LSD+G ++ WG+ GQLG S+ +KM P I
Sbjct: 218 PQKVAALEGMSMTSVSAGGWHSAALSDIGDIYTWGWNERGQLGARSKGVKMKVEPESIES 277
Query: 262 LEHA-----------ASGKDRPLLVRQGSVNS--------SGKAGRSYVKEIACGGRHSA 302
+ A ++ KD + V +V S K+IACG RHSA
Sbjct: 278 VRPAKIQKTQTGGIPSNYKDEEVNVETVNVQSIPSVLDVEDENHELLSFKDIACGSRHSA 337
Query: 303 VVTDAGALLTFGWGLYGQ 320
VTD G+L ++G YGQ
Sbjct: 338 AVTDDGSLYSWGCNDYGQ 355
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 103/257 (40%), Gaps = 48/257 (18%)
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
+ S LTS + +P+ A++ A GW H + +++ G + + W PS
Sbjct: 41 QSHSSLTSTR---SPKHSVADKTANLQHMAIGWDHIIFLSDDGRLTSSSWN--TPSKTQF 95
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
+ S S + L +Q G+E++ SS ++ A +
Sbjct: 96 ERYSSVAS-----SWNAVYLVNKQGQCHSANHGQELLPLPCESSTTNLTKIAAGETDVVA 150
Query: 201 L------------SPCLVTL-NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
+ +P + +P + I V+ G HT++LS +G V+ +G G GQLG G
Sbjct: 151 IDDRAQVHLLQKDAPIFKQIVSPKILIKSVSCGHEHTILLSKIGIVFTFGSGSRGQLGHG 210
Query: 248 SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA 307
+ I+ P + LE G S + ++ GG HSA ++D
Sbjct: 211 T-IESQTQPQKVAALE-----------------------GMS-MTSVSAGGWHSAALSDI 245
Query: 308 GALLTFGWGLYGQRMAK 324
G + T+GW GQ A+
Sbjct: 246 GDIYTWGWNERGQLGAR 262
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 59/144 (40%), Gaps = 16/144 (11%)
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
+A GW H ++++ G++YTWGW E G G+ K K E P+
Sbjct: 233 SAGGW-HSAALSDIGDIYTWGWNE----------RGQLGARSKGVKMKVEPESIESVRPA 281
Query: 169 DKRAGEE--VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
+ + + K E+ N S + L + +A G RH+
Sbjct: 282 KIQKTQTGGIPSNYKDEEVNVETVNVQSIPSVLDVEDENHEL---LSFKDIACGSRHSAA 338
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRI 250
++D G ++ WG GQLGLG RI
Sbjct: 339 VTDDGSLYSWGCNDYGQLGLGDRI 362
>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Brachypodium distachyon]
Length = 449
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 103/274 (37%), Gaps = 53/274 (19%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP-----FPLPTEASVVKAAAGW 113
G ++A E L +WG +D GQ L G + P F P SV+ G
Sbjct: 29 GASHSVALLEGNVLCSWGRGED-GQ--LGHGDAEDRLVPTVISGFDAPRITSVI---CGA 82
Query: 114 AHCVSVTEA-GEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAP 166
H + +E +VY+WGW DFG G F + +Q
Sbjct: 83 DHTTAYSEEEQQVYSWGWG----------DFGRLGHGNSSDVFTPQPVRALQGIKIKQMA 132
Query: 167 PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
D + S R ++ G +L P + G+ + +AAG HT
Sbjct: 133 CGDSHCLAVTMGGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGICVKMIAAGAEHTAA 192
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
+++ G ++GWG+G G LGLG R +P G+ L
Sbjct: 193 VTEDGDLYGWGWGRYGNLGLGDR-----NDRFVPEKVSLVEGEKMVL------------- 234
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
IACG RH+ V+ +G L T+GW YGQ
Sbjct: 235 -------IACGWRHTITVSSSGILYTYGWSKYGQ 261
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 96/244 (39%), Gaps = 63/244 (25%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
TP+P + + A G +HC++VT GEV +WG ++
Sbjct: 116 TPQPVRALQGIKIKQMACGDSHCLAVTMGGEVQSWG---------------------RNQ 154
Query: 154 TGKQSALPTEQAP-PSDKRAGEEVVKR------RKTSSAREESE----------NPASGD 196
G+ TE + P +A E + + T++ E+ + N GD
Sbjct: 155 NGQLGLGTTEDSLLPQKIQAFEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGD 214
Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
P V+L G K+ +A G RHT+ +S G ++ +G+ GQLG G + P
Sbjct: 215 RNDRFVPEKVSLVEGEKMVLIACGWRHTITVSSSGILYTYGWSKYGQLGHGDFEDHL-FP 273
Query: 257 HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
H + L+ +++ +I+ G RH+ +T G L +GW
Sbjct: 274 HKVEALKDSST------------------------SQISGGWRHTMALTSDGKLYGWGWN 309
Query: 317 LYGQ 320
+GQ
Sbjct: 310 KFGQ 313
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 80/217 (36%), Gaps = 26/217 (11%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G L WG G L PE L +V A GW H ++V+ +G
Sbjct: 192 AVTEDGDLYGWGWGR-YGNLGLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITVSSSGI 250
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + P + D + R T +
Sbjct: 251 LYTYGWSK----------YGQLGH----GDFEDHLFPHKVEALKDSSTSQISGGWRHTMA 296
Query: 185 AREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+ + +GD SP V K+ +VA G RHTL ++ V+
Sbjct: 297 LTSDGKLYGWGWNKFGQVGAGDSVDHCSPVQVMFPAEQKVAQVACGWRHTLAYTEKKNVF 356
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
WG G GQLG G + P +I + SG +
Sbjct: 357 AWGRGTSGQLGHGEIVDR-NKPLMIDAISPDGSGSKK 392
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Query: 50 DSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
DS GG +A + GKL WG + GQ +P P E V +
Sbjct: 281 DSSTSQISGGWRHTMALTSDGKLYGWG-WNKFGQVGAGDSVDHCSPVQVMFPAEQKVAQV 339
Query: 110 AAGWAHCVSVTEAGEVYTWG 129
A GW H ++ TE V+ WG
Sbjct: 340 ACGWRHTLAYTEKKNVFAWG 359
>gi|356573964|ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 395
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 117/316 (37%), Gaps = 77/316 (24%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSY----LTSGKHGETPEPFPLPTEASVVKAAAGWA 114
G +LA ++ GKL TWG + + K TP + +V+AA G
Sbjct: 46 GSRNSLAIADDGKLFTWGWNQRATLGHPAETKSENKTENTPSQVKALSSVKIVQAAIGGW 105
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKV-TRDFGSAGSFQKD-----------------STGK 156
HC++V + G Y WG E + R G+ ++D + G
Sbjct: 106 HCLAVDDQGRAYAWGGNEYGQCGEEPERKDGTGRPLRRDIEIPQRCAPKLVVRQVAAGGT 165
Query: 157 QSALPTEQA---------PPSDKRAGEEVVKRRKTSSAR--------------------- 186
S + T + PP D + V+ + + R
Sbjct: 166 HSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALQEDGTLWAW 225
Query: 187 --EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
E +GD P V + + +AAGG H+ L+D G+V+GWG G G+L
Sbjct: 226 GNNEYGQLGTGDTQPRSQPIRVQGLSDLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRL 285
Query: 245 GLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
G G K + ++P +G+D + +++CGG HS +
Sbjct: 286 GFGDSDK---SSKMVPQKVQLLAGED--------------------IVQVSCGGTHSVAL 322
Query: 305 TDAGALLTFGWGLYGQ 320
T G + +FG G +G+
Sbjct: 323 TRDGHMFSFGRGDHGR 338
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 16/113 (14%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
D+ + P V L G I +V+ GG H++ L+ G ++ +G G G+LG G ++
Sbjct: 291 DKSSKMVPQKVQLLAGEDIVQVSCGGTHSVALTRDGHMFSFGRGDHGRLGYGRKV-TTGQ 349
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKA--GRSYVKEIACGGRHSAVVTD 306
P +P D P + SG A G K +ACGGRH+ + +
Sbjct: 350 PMEVPI--------DLPP-----PQDPSGTATEGHWIAKLVACGGRHTLAIVE 389
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 12/137 (8%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
+ P PI + + D+ GG + A ++ G++ WG + + S K +
Sbjct: 237 DTQPRSQPIRVQGLSDLTLVDIAAGGW-HSTALTDEGEVYGWGRGEHGRLGFGDSDKSSK 295
Query: 94 -TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
P+ L +V+ + G H V++T G ++++G D G G +K
Sbjct: 296 MVPQKVQLLAGEDIVQVSCGGTHSVALTRDGHMFSFG----------RGDHGRLGYGRKV 345
Query: 153 STGKQSALPTEQAPPSD 169
+TG+ +P + PP D
Sbjct: 346 TTGQPMEVPIDLPPPQD 362
>gi|325185931|emb|CCA20435.1| hypothetical protein VOLCADRAFT_70529 [Albugo laibachii Nc14]
Length = 388
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 111/288 (38%), Gaps = 93/288 (32%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSA---DDEGQSYLTSGKHGETPEP 97
P ++CGG++ F LA +++ +LI WGSA + + T H P
Sbjct: 46 PCITQICGGET----------FCLALNDANQLIGWGSAFYGELGPEKATTEECHVICVRP 95
Query: 98 FPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
L S+ + A GW H +++++ G +Y WG + F G
Sbjct: 96 HVLFPSFSLEWERIACGWHHAIAISK-GCMYAWG----------SNAFDQIG-------- 136
Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
+ S++ S+ P +SP + + + +
Sbjct: 137 -------------------------RVSNSNSNSQLPNC-----IISPMRIAFS--INVI 164
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR---IKMVPTPHLIPCLEHAASGKDRP 272
V+AG H+L+L ++W WG G+LGLG IK V +P L+ E + P
Sbjct: 165 NVSAGFGHSLLLDQHHRLWTWGRNSNGELGLGQSFRDIKSVQSPQLVKATE------EEP 218
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
L + IA G HSA ++ G L TFGWGLY Q
Sbjct: 219 LHL------------------IATGYAHSAAISLTGQLYTFGWGLYHQ 248
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 100/264 (37%), Gaps = 76/264 (28%)
Query: 59 GCGFALATSESGKLITWGSADD----EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA 114
G G +L + +L TWG + GQS+ K ++P+ E + A G+A
Sbjct: 169 GFGHSLLLDQHHRLWTWGRNSNGELGLGQSF-RDIKSVQSPQLVKATEEEPLHLIATGYA 227
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H +++ G++YT+GW G + + G L
Sbjct: 228 HSAAISLTGQLYTFGW----------------GLYHQLGHGNSQDL-------------H 258
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
E+ + + R++ P ++IT VA G HT + + G ++
Sbjct: 259 ELTRIQAFDGIRDDQAVP-------------------IRITSVACGTWHTAVCTSSGDLY 299
Query: 235 GWGYGGEGQLG-LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
WG+ GQLG LG K+ PC+ + + LL VK+
Sbjct: 300 TWGWNENGQLGHLGKASKIS------PCVVSSQDAAIQTLL--------------ENVKD 339
Query: 294 IACGGRHSAVVTDAGALLTFGWGL 317
+ CG RH+ + + G + F WGL
Sbjct: 340 VVCGNRHTTALCEGGKV--FHWGL 361
>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
Length = 1066
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 77/306 (25%), Positives = 123/306 (40%), Gaps = 63/306 (20%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V A G AH
Sbjct: 49 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVACGEAHT 105
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 106 LALNDKGQVYAWGLDSDGQLGLQGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 162
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + ++++ SP L+ G+ +VAAGG H
Sbjct: 163 KASEVFCWGQNKYGQLGLGIDCQKQT------------SPQLIKSLLGIPFMQVAAGGAH 210
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 211 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 269
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRH-SAVVTDAGALLTFG 314
G V + G G S V ++ACG +H SA V +G + +FG
Sbjct: 270 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFG 329
Query: 315 WGLYGQ 320
G GQ
Sbjct: 330 LGGNGQ 335
>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
Length = 434
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 113/281 (40%), Gaps = 56/281 (19%)
Query: 56 CGGGCGFALATSESGKLI-TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA 114
CG AL ++ SG ++ +WG +D GQ L G + EP + S++ A
Sbjct: 14 CGSSHSLALISTPSGSMVLSWGRGED-GQ--LGHGDAEDRQEPQAV---FSLLHRGATSV 67
Query: 115 HC---VSVTEAG---EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP------T 162
HC S+ AG +VY+WGW DFG G+ LP
Sbjct: 68 HCGAEYSMAVAGGDKQVYSWGWG----------DFGRLGTGDVKDVFIPCPLPALAGRRV 117
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
D + + + R ++ G L P LVT G ++ VA G
Sbjct: 118 ASVACGDTHTLVATAEGQLFAFGRNQNGQCGLGSIQDCLEPQLVTALQGKEVVAVACGAE 177
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
H++ ++ G+V+ WG+G G +G G S+ + +PT L LE
Sbjct: 178 HSMCVTSEGEVYCWGWGRYGNIGDGESQDRHLPT--LAKGLEGVK--------------- 220
Query: 282 SSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQRM 322
V ++ CG RHS V + GA+ T+GWG Y Q M
Sbjct: 221 ---------VAQVNCGWRHSIAVDEGGAMYTWGWGAYAQLM 252
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 47/118 (39%), Gaps = 27/118 (22%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L GVK+ +V G RH++ + + G ++ WG+G QL G R H +P
Sbjct: 210 PTLAKGLEGVKVAQVNCGWRHSIAVDEGGAMYTWGWGAYAQLMQGDR-----KDHYVP-- 262
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
R V+Q V +A G RH+ G L GW +GQ
Sbjct: 263 -------KRVEAVQQ-------------VATVAGGWRHTMAADSQGRLFASGWNKFGQ 300
>gi|225464728|ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
vinifera]
Length = 489
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 124/321 (38%), Gaps = 59/321 (18%)
Query: 39 LSPIPARLC----GGDSWKDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGE 93
L PIP RLC S G CG F + GKL WG D L G+
Sbjct: 73 LCPIPGRLCLPSVENASGLTEVGISCGLFHSSLVVDGKLWIWGKGDG---GRLGFGQEYP 129
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW------------RECVPSAKVTR 141
P P S+ A G H V+++ G+V+TWG+ RE +P ++
Sbjct: 130 AFLPTLNPNLDSIRSTALGGVHSVALSSLGQVFTWGYGGFGALGHSVYHRELLP--RMVE 187
Query: 142 DFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL 201
+A + G +A TE +GE R R +E L
Sbjct: 188 GSWNAKIRHIATAGTHTAAITE--------SGELYTWGRDQGDGRLGLGPNCGPNEGGGL 239
Query: 202 S-PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI---KMVPTPH 257
S P V P V + V+ GG T++L+ GQ+W WG +LG G ++ K P P
Sbjct: 240 SIPSKVKALP-VPVAAVSCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWKPQPIPS 298
Query: 258 L--IPCLEHAASGKDRPLLVRQGSVNS-----SGKAGRS-----------------YVKE 293
L + ++ A+ G L G V S G+ G S +V
Sbjct: 299 LQDVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSIENQKIPTVIEALADEHVIY 358
Query: 294 IACGGRHSAVVTDAGALLTFG 314
IACGG SA +TD G L +G
Sbjct: 359 IACGGSSSAAITDNGKLYMWG 379
>gi|6630609|dbj|BAA88519.1| cyclin-E binding protein 1 [Homo sapiens]
Length = 1024
Score = 65.5 bits (158), Expect = 4e-08, Method: Composition-based stats.
Identities = 44/121 (36%), Positives = 61/121 (50%), Gaps = 25/121 (20%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T +P +V GV + +++AG H++ LS G ++ WG GQLGLG
Sbjct: 179 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLG------------ 226
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
H S KD P L+ +G N V+ +ACGG HSA++T G L TFG G +G
Sbjct: 227 ----HTES-KDDPSLI-EGLDNQK-------VEFVACGGSHSALLTQDGLLFTFGAGKHG 273
Query: 320 Q 320
Q
Sbjct: 274 Q 274
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 48/221 (21%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKH---GETPEPFPLPTEASVVKAAAGWA 114
CG +LA S+ G+L WG + GQ L G+ TP+ + + +AG A
Sbjct: 145 CGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRKFPSTTTPQIVEHLAGVPLAQISAGEA 201
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST-----------------GKQ 157
H ++++ +G +Y+WG EC G + KD G
Sbjct: 202 HSMALSMSGNIYSWGKNEC-------GQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSH 254
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKV 217
SAL T+ AG K + ++E L PCLV G ++T++
Sbjct: 255 SALLTQDGLLFTFGAG----KHGQLGHNSTQNE----------LRPCLVAELVGYRVTQI 300
Query: 218 AAGGRHTLI-LSDMGQVWGWGYGGEGQLGL-GSRIKMVPTP 256
A G HTL +SD+G+V+ +G G +GQLG G+R +++P P
Sbjct: 301 ACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLP 341
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 54/219 (24%), Positives = 85/219 (38%), Gaps = 29/219 (13%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
E +++ G H +++++ GE++ WG + V R F S + Q + +P
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWG-QNLHGQLGVGRKFPSTTTPQ--IVEHLAGVPL 193
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + + S + E G P L+ K+ VA GG
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGS 253
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
H+ +L+ G ++ +G G GQLG S L PCL G
Sbjct: 254 HSALLTQDGLLFTFGAGKHGQLGHNS-----TQNELRPCLVAELVG-------------- 294
Query: 283 SGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQ 320
V +IACG H+ A V+D G + +FG G GQ
Sbjct: 295 ------YRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQ 327
>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 443
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 130/344 (37%), Gaps = 83/344 (24%)
Query: 15 EECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESG 70
E ET+VY WGY G E + +P + K V G ++A + +G
Sbjct: 44 NEYPETIVYSWGYGGFGQLGLQNENN-YYTPTEIEVLTDKKIKKVEAGKS-ISMALTHNG 101
Query: 71 KLITWGSA-------DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
++ +WG +D +T PE + + + G H +VTE G
Sbjct: 102 EVYSWGKNKGGILGHEDRLSFNMTQ------PERIEKLLGKKIKQISCGQFHMAAVTEDG 155
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
EVYTWG +E FG G EE+ + +K
Sbjct: 156 EVYTWGNKE----------FGKLGH------------------------EEELKQEQKIK 181
Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
R + D ++ P + +K +VA G + T++LS+ G+V+ +GY G
Sbjct: 182 IKRGNLSHDYLQD---SMLPQKIESLGNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGS 238
Query: 244 LGLGSRIKMVPTPHLIPCLEH----AASGKDRPLLVRQGSV-----NSSGKAGRSY---- 290
LG S V TP LI L +A + +QG + N +G+ G S
Sbjct: 239 LGYVSDQNSVTTPQLIKDLNDIVKISAGYSFCAAITKQGKLYTWGNNRNGQLGNSQSLYQ 298
Query: 291 --------------VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +++CG A +T G L T+G+G GQ
Sbjct: 299 TKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDGQ 342
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 101/266 (37%), Gaps = 65/266 (24%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F + SE GK+ T+G Y++ TP+ + +VK +AG++ C +
Sbjct: 215 GIQFTVVLSEDGKVYTFGYNQYGSLGYVSDQNSVTTPQL--IKDLNDIVKISAGYSFCAA 272
Query: 119 VTEAGEVYTWG------------WRECVPSAKVTRDFGSAGSFQKDSTGKQS-ALPTEQA 165
+T+ G++YTWG + PS + FGS S S G A T+Q
Sbjct: 273 ITKQGKLYTWGNNRNGQLGNSQSLYQTKPS--IVTGFGSQNSIVDVSCGDNFIAALTQQG 330
Query: 166 PP------SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
D + G G++ +P V KI K+A
Sbjct: 331 QLYTWGFGGDGQLGH--------------------GNKSDLYAPRHVEFKQ--KIIKIAC 368
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
GG H +++ Q++ +G G EGQLG+G + + P L GK
Sbjct: 369 GGSHAAFITEDNQLYQFGRGSEGQLGIGQNVASEASIRSTPNLVQYFKGKQ--------- 419
Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVT 305
V ++ CGG H+ +T
Sbjct: 420 -----------VVDVTCGGEHTIAIT 434
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 104/280 (37%), Gaps = 61/280 (21%)
Query: 65 ATSESGKLITWGSAD--------DEGQSYLTSGKHGETPEPF----PLPTEASVV----- 107
A +E G++ TWG+ + + Q K G + LP + +
Sbjct: 150 AVTEDGEVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKA 209
Query: 108 -KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
+ A G V ++E G+VYT+G+ + +GS G ++ L +
Sbjct: 210 KQVACGIQFTVVLSEDGKVYTFGYNQ----------YGSLGYVSDQNSVTTPQLIKDLND 259
Query: 167 PSDKRAGEE----VVKRRKTSS-AREESENPASGDEFFTLSPCLVT-LNPGVKITKVAAG 220
AG + K+ K + + + + P +VT I V+ G
Sbjct: 260 IVKISAGYSFCAAITKQGKLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCG 319
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
L+ GQ++ WG+GG+GQLG G++ + H+
Sbjct: 320 DNFIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHV---------------------- 357
Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ + +IACGG H+A +T+ L FG G GQ
Sbjct: 358 -----EFKQKIIKIACGGSHAAFITEDNQLYQFGRGSEGQ 392
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 18 KETVVYMWGY-LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLIT 74
K+ +Y WG G + P+ + G S + CG F A ++ G+L T
Sbjct: 275 KQGKLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYT 334
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
WG D GQ L G + P + + ++K A G +H +TE ++Y +G
Sbjct: 335 WGFGGD-GQ--LGHGNKSDLYAPRHVEFKQKIIKIACGGSHAAFITEDNQLYQFG 386
>gi|187954501|gb|AAI40717.1| Hect domain and RLD 5 [Homo sapiens]
Length = 1024
Score = 65.5 bits (158), Expect = 4e-08, Method: Composition-based stats.
Identities = 44/121 (36%), Positives = 61/121 (50%), Gaps = 25/121 (20%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T +P +V GV + +++AG H++ LS G ++ WG GQLGLG
Sbjct: 179 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLG------------ 226
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
H S KD P L+ +G N V+ +ACGG HSA++T G L TFG G +G
Sbjct: 227 ----HTES-KDDPSLI-EGLDNQK-------VEFVACGGSHSALLTQDGLLFTFGAGKHG 273
Query: 320 Q 320
Q
Sbjct: 274 Q 274
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 48/221 (21%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKH---GETPEPFPLPTEASVVKAAAGWA 114
CG +LA S+ G+L WG + GQ L G+ TP+ + + +AG A
Sbjct: 145 CGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRKFPSTTTPQIVEHLAGVPLAQISAGEA 201
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST-----------------GKQ 157
H ++++ +G +Y+WG EC G + KD G
Sbjct: 202 HSMALSMSGNIYSWGKNEC-------GQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSH 254
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKV 217
SAL T+ AG K + ++E L PCLV G ++T++
Sbjct: 255 SALLTQDGLLFTFGAG----KHGQLGHNSTQNE----------LRPCLVAELVGYRVTQI 300
Query: 218 AAGGRHTLI-LSDMGQVWGWGYGGEGQLGL-GSRIKMVPTP 256
A G HTL +SD+G+V+ +G G +GQLG G+R +++P P
Sbjct: 301 ACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLP 341
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 54/219 (24%), Positives = 85/219 (38%), Gaps = 29/219 (13%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
E +++ G H +++++ GE++ WG + V R F S + Q + +P
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWG-QNLHGQLGVGRKFPSTTTPQ--IVEHLAGVPL 193
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + + S + E G P L+ K+ VA GG
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGS 253
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
H+ +L+ G ++ +G G GQLG S L PCL G
Sbjct: 254 HSALLTQDGLLFTFGAGKHGQLGHNS-----TQNELRPCLVAELVG-------------- 294
Query: 283 SGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQ 320
V +IACG H+ A V+D G + +FG G GQ
Sbjct: 295 ------YRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQ 327
>gi|110825982|ref|NP_057407.2| E3 ISG15--protein ligase HERC5 [Homo sapiens]
gi|296434523|sp|Q9UII4.2|HERC5_HUMAN RecName: Full=E3 ISG15--protein ligase HERC5; AltName:
Full=Cyclin-E-binding protein 1; AltName: Full=HECT
domain and RCC1-like domain-containing protein 5
gi|119626425|gb|EAX06020.1| hect domain and RLD 5 [Homo sapiens]
Length = 1024
Score = 65.5 bits (158), Expect = 4e-08, Method: Composition-based stats.
Identities = 44/121 (36%), Positives = 61/121 (50%), Gaps = 25/121 (20%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T +P +V GV + +++AG H++ LS G ++ WG GQLGLG
Sbjct: 179 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLG------------ 226
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
H S KD P L+ +G N V+ +ACGG HSA++T G L TFG G +G
Sbjct: 227 ----HTES-KDDPSLI-EGLDNQK-------VEFVACGGSHSALLTQDGLLFTFGAGKHG 273
Query: 320 Q 320
Q
Sbjct: 274 Q 274
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 48/221 (21%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKH---GETPEPFPLPTEASVVKAAAGWA 114
CG +LA S+ G+L WG + GQ L G+ TP+ + + +AG A
Sbjct: 145 CGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRKFPSTTTPQIVEHLAGVPLAQISAGEA 201
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST-----------------GKQ 157
H ++++ +G +Y+WG EC G + KD G
Sbjct: 202 HSMALSMSGNIYSWGKNEC-------GQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSH 254
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKV 217
SAL T+ AG K + ++E L PCLV G ++T++
Sbjct: 255 SALLTQDGLLFTFGAG----KHGQLGHNSTQNE----------LRPCLVAELVGYRVTQI 300
Query: 218 AAGGRHTLI-LSDMGQVWGWGYGGEGQLGL-GSRIKMVPTP 256
A G HTL +SD+G+V+ +G G +GQLG G+R +++P P
Sbjct: 301 ACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLP 341
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 54/219 (24%), Positives = 85/219 (38%), Gaps = 29/219 (13%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
E +++ G H +++++ GE++ WG + V R F S + Q + +P
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWG-QNLHGQLGVGRKFPSTTTPQ--IVEHLAGVPL 193
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + + S + E G P L+ K+ VA GG
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGS 253
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
H+ +L+ G ++ +G G GQLG S L PCL G
Sbjct: 254 HSALLTQDGLLFTFGAGKHGQLGHNS-----TQNELRPCLVAELVG-------------- 294
Query: 283 SGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQ 320
V +IACG H+ A V+D G + +FG G GQ
Sbjct: 295 ------YRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQ 327
>gi|338723782|ref|XP_001915115.2| PREDICTED: LOW QUALITY PROTEIN: e3 ISG15--protein ligase HERC5
[Equus caballus]
Length = 966
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 105/222 (47%), Gaps = 28/222 (12%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK-HGETPEPFPLPTEASV--V 107
K++ CG +LA S+ G+L WG + GQ L G+ TP P + + V V
Sbjct: 82 KNIIQITCGDYHSLALSKGGELFAWGQ-NTYGQ--LGVGRTFASTPTPQIVEHLSGVPLV 138
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP- 166
+ +AG AH ++++ + VY+WG +C G + KDS AL ++
Sbjct: 139 QISAGEAHSMALSMSRNVYSWGRNDC-------GQLGLGHTNNKDSPSLIEALDNQEVEF 191
Query: 167 ------PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
+ + +V + N + L+PCLVT G ++T++A G
Sbjct: 192 LACGGSHTALLTKDGLVFTFGAGKCGQLGHNSTQNE----LTPCLVTELVGKRVTQIACG 247
Query: 221 GRHTL-ILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIP 260
RHTL +SD+G+V+ +G G GQLG G + +++P P +P
Sbjct: 248 RRHTLAYVSDLGKVFSFGSGEGGQLGNGATHHQLIPLPMKLP 289
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 90/219 (41%), Gaps = 29/219 (13%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
E ++++ G H +++++ GE++ WG + V R F S + Q S +P
Sbjct: 81 EKNIIQITCGDYHSLALSKGGELFAWG-QNTYGQLGVGRTFASTPTPQ--IVEHLSGVPL 137
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + + R S R + G SP L+ ++ +A GG
Sbjct: 138 VQISAGEAHSMALSMSRNVYSWGRNDCGQLGLGHTNNKDSPSLIEALDNQEVEFLACGGS 197
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
HT +L+ G V+ +G G GQLG S L PCL GK
Sbjct: 198 HTALLTKDGLVFTFGAGKCGQLGHNS-----TQNELTPCLVTELVGKR------------ 240
Query: 283 SGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQ 320
V +IACG RH+ A V+D G + +FG G GQ
Sbjct: 241 --------VTQIACGRRHTLAYVSDLGKVFSFGSGEGGQ 271
>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Takifugu rubripes]
Length = 1031
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 115/304 (37%), Gaps = 57/304 (18%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKD-VCGGGCGFALATSESGKLITWGSADDEGQSYLTS 88
G E++P+ P + G K+ VCGG L G + T GS + GQ L
Sbjct: 13 GIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLL--HDGSVYTCGS-NSCGQ--LGH 67
Query: 89 GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS 148
K G TPE + + G AH ++V E G+V+ WG G G
Sbjct: 68 NKPGITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGA-------------GEEGQ 114
Query: 149 FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-----NPASGD------E 197
+T +P D R + + + + ++ + SG E
Sbjct: 115 LGLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGE 174
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
L P + G+ + K+ AGG H+ LS G V+GWG GQLGL
Sbjct: 175 PSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLND--------- 225
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWG 316
++ +V K RS V I+CG H+A +T G L TFG G
Sbjct: 226 -----------------IQDRAVPCHIKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDG 268
Query: 317 LYGQ 320
+GQ
Sbjct: 269 SWGQ 272
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 117/332 (35%), Gaps = 98/332 (29%)
Query: 29 PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYL 86
PG +PE G + + CG A LA +E G++ WG A +EGQ L
Sbjct: 70 PGITPE-----------FVGALDTQKITLVSCGQAHSLAVNEQGQVFAWG-AGEEGQLGL 117
Query: 87 -TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS 145
T+ P + + + G HC+++++ G+++TWG +
Sbjct: 118 GTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQ-------------NT 164
Query: 146 AGSFQKDSTGKQSALPTEQAP-PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS-- 202
+G G P++ P P AG + K A GD F LS
Sbjct: 165 SGQL-----GLGKGEPSKLFPQPLKSLAGIPLAKI------------TAGGDHSFALSLS 207
Query: 203 ------------------------PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
PC + K+ ++ G HT L+ G ++ +G
Sbjct: 208 GAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGEEHTAALTKDGGLFTFGD 267
Query: 239 GGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
G GQLG GS L+P R +L G + V +I CG
Sbjct: 268 GSWGQLGHGSTAN-----ELLP----------RRVLELMG----------TEVSQITCGR 302
Query: 299 RHS-AVVTDAGALLTFGWGLYGQRMAKCLAGD 329
H+ A +G + FG +GQ L+ D
Sbjct: 303 HHTLAFAPSSGGVYAFGCNSHGQLGTGVLSAD 334
>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
Length = 1935
Score = 65.5 bits (158), Expect = 4e-08, Method: Composition-based stats.
Identities = 61/234 (26%), Positives = 96/234 (41%), Gaps = 40/234 (17%)
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD-STGKQ 157
PL E +K + GW H +T+ GE+YTWG + + G K S K+
Sbjct: 1117 PLKNEKKAIKVSCGWDHIAVITDDGELYTWG-------SNQSGQLGHGLEVNKTLSLPKR 1169
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKT-----SSAREESENPASGDEFFTLS-PCLVTLNPG 211
++P G E + S ++ G + S P ++ G
Sbjct: 1170 VDFFRGKSPIFMVECGGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTG 1229
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPT----PHLIPCLEHAA 266
KI +AAG H ++L G+++ +GYG GQLG GS K +PT ++ L+H
Sbjct: 1230 QKIQAIAAGFAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHD 1289
Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
GK + +IACG HS + ++ G + ++G G GQ
Sbjct: 1290 GGK---------------------ITQIACGFGHSVICSENGEVYSWGLGKQGQ 1322
Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 66/280 (23%), Positives = 105/280 (37%), Gaps = 91/280 (32%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQ-SYLTSGKHGETPEPF 98
SPI CGG+ +A + + +WGS D GQ + T + P+
Sbjct: 1177 SPIFMVECGGEH-----------TIAVDSNYFVYSWGS-DKFGQLGHGTKAVNQSRPKVI 1224
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS--AGSFQKDSTGK 156
T + AAG+AH + + ++GE++++G+ DFG GSF +
Sbjct: 1225 EELTGQKIQAIAAGFAHNIVLKKSGELFSFGYG----------DFGQLGTGSFHSKN--- 1271
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
+PT R E G + + G KIT+
Sbjct: 1272 ---IPT-----------------------RIEINAIMGG----------LQHHDGGKITQ 1295
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
+A G H++I S+ G+V+ WG G +GQLG + + P LI L
Sbjct: 1296 IACGFGHSVICSENGEVYSWGLGKQGQLG-HKVFENISKPRLIETLRG------------ 1342
Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
V +I+CG H+ TD + ++G G
Sbjct: 1343 --------------VTKISCGHFHTVATTDLKNVYSWGSG 1368
Score = 47.8 bits (112), Expect = 0.008, Method: Composition-based stats.
Identities = 66/302 (21%), Positives = 106/302 (35%), Gaps = 108/302 (35%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CGF ++ SE+G++ +WG Q L +P + T V K + G H
Sbjct: 1297 ACGFGHSVICSENGEVYSWGLGK---QGQLGHKVFENISKPRLIETLRGVTKISCGHFHT 1353
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
V+ T+ VY+WG +GE +
Sbjct: 1354 VATTDLKNVYSWG------------------------------------------SGEHM 1371
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS---DMGQ- 232
+ SS ++ES P +V ++KV G HT+ ++ D+
Sbjct: 1372 --KLGHSSDKDES------------VPKVVDFFIQKNVSKVVCGQNHTMTITFPDDLNNS 1417
Query: 233 -----------------VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
++ WG G+LGLG +K +P D+P+
Sbjct: 1418 NQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLK---SPFF-----------DKPIPT 1463
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQRMAKCLAGDGINMGS 335
VNS + +I+CG SA++T A+ +G G +GQ G+G N
Sbjct: 1464 AIKGVNSLN------LIDISCGSDFSAMITSNNAIYVWGCGRFGQ------IGNGKNDDV 1511
Query: 336 WV 337
WV
Sbjct: 1512 WV 1513
>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
queenslandica]
Length = 4694
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 27/129 (20%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
S D T +P G+ + K+A +GG+H L ++ G+++ WG G +G+LGLG+ +
Sbjct: 3903 SSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGEDGKLGLGTTVN 3962
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
M PHLI L+ +V + CG HSA +TD G+L
Sbjct: 3963 M-NVPHLIESLK------------------------SKHVIDAGCGSSHSACITDDGSLY 3997
Query: 312 TFGWGLYGQ 320
T+G G YG+
Sbjct: 3998 TWGKGRYGR 4006
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 88/232 (37%), Gaps = 52/232 (22%)
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
FP E + H +++T+ G+VY+WG GS G +T Q
Sbjct: 502 FPGDEEIIQIDHNPSGNHILALTKDGKVYSWGQ-------------GSNGVLGIGNTESQ 548
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVT 207
+A PT A S R +++ E+ G+ L P +V
Sbjct: 549 TA-PTAVAALSGDRIVHISAGSMHSAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIVE 607
Query: 208 LNPGVKITKV--AAGGRHTLILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTPHLIPCLEH 264
GVKI +V +G HTL L D GQVW WG G G+LG GS VP P
Sbjct: 608 GLNGVKIVQVDCGSGDAHTLALDDTGQVWSWGDGDYGKLGRPGSDQNKVPKP-------- 659
Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
SG S V +I CG + S +T G L ++G G
Sbjct: 660 -----------------ISGIGSTSPVVKIICGNQISMALTKDGKLYSWGCG 694
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
V+ V+ GRH L ++ G+V+ WG G GQLG GS DR
Sbjct: 3012 VRKVAVSCAGRHVLAVTADGKVFSWGDGQYGQLGHGS-----------------LQSYDR 3054
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P ++ +++E++CG HSA V+ G L T+G G G+
Sbjct: 3055 PKMIEIFQAK--------HIREVSCGTGHSAAVSVNGELFTWGQGADGR 3095
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE----ASVVKAAAGWA 114
G F++ ++ GK+ TWG + Y G + +P P + ++ + A G
Sbjct: 3177 GMHFSVLLTKEGKVYTWGKGE-----YYRLGNDSTSVQPIPTLVDGLASKTITQVAVGAL 3231
Query: 115 HCVSVTEAGEVYTWGWRE 132
HC+++T +GEVY+WG E
Sbjct: 3232 HCLALTSSGEVYSWGDNE 3249
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 31/121 (25%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG--SRIKMVPTPHLI 259
S L L+P + A G + + ++SD G+V+ G G G+LG+G + I+M PH I
Sbjct: 2952 SRTLARLHP----IQFAGGSKCSFVVSDDGKVFACGEGSSGRLGIGGFANIRM---PHQI 3004
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
L +VR+ +V +C GRH VT G + ++G G YG
Sbjct: 3005 SSLSM--------YVVRKVAV--------------SCAGRHVLAVTADGKVFSWGDGQYG 3042
Query: 320 Q 320
Q
Sbjct: 3043 Q 3043
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 40 SPIPAR---LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK----HG 92
S +P + L G K +CG F++A + +G + TWG D Y G H
Sbjct: 4069 SKVPKKIDSLTGKHVIKLLCGSQ--FSMALTTAGHVYTWGKGD-----YYRLGHGDDSHQ 4121
Query: 93 ETPE-PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
TP L +V+ G HC+ TE+G+V++WG
Sbjct: 4122 RTPRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFSWG 4159
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Query: 29 PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTS 88
PG+ K P PI K +CG AL ++ GKL +WG D + +
Sbjct: 649 PGSDQNKVP--KPISGIGSTSPVVKIICGNQISMAL--TKDGKLYSWGCGDTYQLGH-GN 703
Query: 89 GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+H P+ +E V + G HCV++T +VY WG
Sbjct: 704 QEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYAWG 744
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 117/326 (35%), Gaps = 82/326 (25%)
Query: 22 VYMWGYLP----GTSPEKSPILSPIPARLCGGDSWKDVCGGG-CGFALATSESGKLITWG 76
V++WG GT ++ + SPI +R GG C F + S+ GK+ G
Sbjct: 2926 VFVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVV--SDDGKVFACG 2983
Query: 77 SADDEGQS-YLTSGKHGETPEPFPLPTEASVV--KAAAGWA--HCVSVTEAGEVYTWGWR 131
EG S L G P + + + V K A A H ++VT G+V++WG
Sbjct: 2984 ----EGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDG 3039
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN 191
+ +G G S + + QA R+ S S
Sbjct: 3040 Q----------YGQLGHGSLQSYDRPKMIEIFQAK-----------HIREVSCGTGHSAA 3078
Query: 192 PASGDEFFT-----------------LSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQ 232
+ E FT P LV V+I+ VA G R HTL D
Sbjct: 3079 VSVNGELFTWGQGADGRLGHGDSNNQTKPKLVRALEKVRISCVACGSRNAHTLAAGD-NS 3137
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
+W WG G G+LGL + +S D P+ V N +
Sbjct: 3138 LWAWGDGSFGKLGL----------------KDGSSSTDVPVQVITFPSN---------II 3172
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLY 318
+I CG S ++T G + T+G G Y
Sbjct: 3173 QIECGMHFSVLLTKEGKVYTWGKGEY 3198
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 44/101 (43%), Gaps = 27/101 (26%)
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
G H L L+ G+V+ WG G G LG+G + + PT AA DR
Sbjct: 517 GNHILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTA-------VAALSGDR-------- 561
Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ I+ G HSA VT+ G L T+G G YG+
Sbjct: 562 -----------IVHISAGSMHSAAVTEDGVLYTWGKGSYGR 591
>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 1859
Score = 65.5 bits (158), Expect = 4e-08, Method: Composition-based stats.
Identities = 67/261 (25%), Positives = 103/261 (39%), Gaps = 56/261 (21%)
Query: 72 LITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
++TWGS+ + + T G+ TPE P + + G + ++TE G+VY WG
Sbjct: 590 IMTWGSSSNCKLGFKTEGREQSQATPERLPNFNIPEICSISCGSYYSAALTENGDVYMWG 649
Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV----KRRKTSSA 185
GS + + G S +Q P+ + EVV +++
Sbjct: 650 R-------------GSVKNPPLSTLGNGSL--EDQLLPTKVESLSEVVLVSIGYYHSAAL 694
Query: 186 REESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ E GD P +V +T+V G +HT+ L+ G+V+
Sbjct: 695 KSNGELLTWGCGEDGQLGHGDVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLTKNGKVFT 754
Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
WG GQLGLG K TP L+ LE + + +IA
Sbjct: 755 WGTSEYGQLGLGDTQKNC-TPMLVTSLE------------------------KYNIIQIA 789
Query: 296 CGGRHSAVVTDAGALLTFGWG 316
CG H AV+T+A +L FG G
Sbjct: 790 CGSTHCAVLTNAREVLVFGNG 810
Score = 60.1 bits (144), Expect = 2e-06, Method: Composition-based stats.
Identities = 71/306 (23%), Positives = 118/306 (38%), Gaps = 57/306 (18%)
Query: 54 DVCGGGCG--FALATSESGKLITWG--SADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++C CG ++ A +E+G + WG S + S L +G + P + + + VV
Sbjct: 625 EICSISCGSYYSAALTENGDVYMWGRGSVKNPPLSTLGNGSLEDQLLPTKVESLSEVVLV 684
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS- 168
+ G+ H ++ GE+ TWG C G G Q+ Q S
Sbjct: 685 SIGYYHSAALKSNGELLTWG---C----------GEDGQLGHGDVLNQTIPKVVQTMTSH 731
Query: 169 ---DKRAGEE----VVKRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
+ GE+ + K K + E GD +P LVT I ++A G
Sbjct: 732 WVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLEKYNIIQIACG 791
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH------AASGKDRPLL 274
H +L++ +V +G G +GS ++ P ++P L+H + L
Sbjct: 792 STHCAVLTNAREVLVFGNGA----AMGS-ANIISVPMMVPALKHLNIERLSCGHYSTAAL 846
Query: 275 VRQGSVNSSGKAGR--------------------SYVKEIACGGRHSAVVTDAGALLTFG 314
G V + G +++I+CGGRH A +TD+G + T G
Sbjct: 847 TECGDVYTWGSGQELGHGTNQSELHPKLVDGLRSQSIRQISCGGRHMAFLTDSGKIYTCG 906
Query: 315 WGLYGQ 320
+GQ
Sbjct: 907 KDPFGQ 912
>gi|383851572|ref|XP_003701306.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Megachile rotundata]
Length = 864
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 99/264 (37%), Gaps = 81/264 (30%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G +LA G + WGS + EGQ L G +P + V + +AG+ H
Sbjct: 222 AAGSHHSLALISDGGVFAWGS-NLEGQLGLPDVS-GLVNKPTKVHIPEPVKQISAGYYHS 279
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+TE+G VY G E S K+ D +F T KQ LP+
Sbjct: 280 AFLTESGLVYICGESE---SGKLGIDV----NFSTQITPKQMQLPS-------------- 318
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
P V VA GG HT++L++ G ++
Sbjct: 319 ---------------------------------PAVH---VACGGHHTVVLAENGNIYCT 342
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G GQLGLG+ + + TP L+ S G + I+C
Sbjct: 343 GSNSNGQLGLGTNVTELHTPKLL----------------------SRGMLQNETISRISC 380
Query: 297 GGRHSAVVTDAGALLTFGWGLYGQ 320
G H+A+VT++G L T G G +G+
Sbjct: 381 GESHTAIVTESGKLFTCGDGRHGK 404
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 55/135 (40%), Gaps = 25/135 (18%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI----PCLEHAA 266
G KI ++AAG H+L L G V+ WG EGQLGL +V P + P + +A
Sbjct: 215 GSKILQLAAGSHHSLALISDGGVFAWGSNLEGQLGLPDVSGLVNKPTKVHIPEPVKQISA 274
Query: 267 SGKDRPLLVRQGSV-----NSSGKAGR----------------SYVKEIACGGRHSAVVT 305
L G V + SGK G S +ACGG H+ V+
Sbjct: 275 GYYHSAFLTESGLVYICGESESGKLGIDVNFSTQITPKQMQLPSPAVHVACGGHHTVVLA 334
Query: 306 DAGALLTFGWGLYGQ 320
+ G + G GQ
Sbjct: 335 ENGNIYCTGSNSNGQ 349
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 21/117 (17%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
C+ L P K+T VA G HTLI + +++ G EGQLG G+
Sbjct: 152 CVKVLKPE-KVTHVACGRAHTLISTGAQKIFACGSDQEGQLGRGTSA------------- 197
Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P+LV +G AG S + ++A G HS + G + +G L GQ
Sbjct: 198 -IGDSSSSPVLVY-----DAGLAG-SKILQLAAGSHHSLALISDGGVFAWGSNLEGQ 247
>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
Length = 1057
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 69/277 (24%), Positives = 108/277 (38%), Gaps = 58/277 (20%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V A G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVACGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLQGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCQKQT------------SPQLIKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
+ +L+ G ++GWG GQLGL P+L+ L
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQK----------------- 243
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ I CG H+A +T G + TFG G YGQ
Sbjct: 244 -------IVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 71/279 (25%), Positives = 112/279 (40%), Gaps = 47/279 (16%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKA 109
+++ CG A LA ++ G++ WG D +GQ L + P ++ +V+
Sbjct: 84 QNIVAVACGEAHTLALNDKGQVYAWG-LDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQV 142
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDSTGK--QSAL--PT 162
A G+ H +++++A EV+ WG + +G G QK ++ + +S L P
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNK----------YGQLGLGIDCQKQTSPQLIKSLLGIPF 192
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + R + DE P L+ KI + G
Sbjct: 193 MQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGED 252
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
HT L+ G V+ +G GG GQLG S T H I R + GS+
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGSI-- 295
Query: 283 SGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V + ACG +H SA V +G + +FG G GQ
Sbjct: 296 --------VTQAACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|281211994|gb|EFA86155.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 537
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 115/276 (41%), Gaps = 46/276 (16%)
Query: 66 TSESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
+ E GKL++ GS +D GQ L G G TP +V AG+ H ++VT++G
Sbjct: 179 SEEQGKLLSVGS-NDFGQLGLGEGMRGSSTPRVVEKLNNQELVSIGAGFDHSMAVTKSGH 237
Query: 125 VYTWGW-------RECVPSAKVTRDFGSAGSFQKDST-GKQSALPT-----EQAPPSDKR 171
+ WG+ + V +V + S + T + +PT E +
Sbjct: 238 TFGWGYNVEGQIGQRIVEYKRVESAGENVDSMENSMTPDAEYNIPTLVPEMESIKVAKVY 297
Query: 172 AGEE---VVKRRKTSSA--REESENPASGDEFF--TLSPCLVTLNPGVKITKVAAGGRHT 224
G + +V R A E+ GD+ P V + VK +++ G HT
Sbjct: 298 CGYDCSFLVSARGNVYAMGNNETGTLGVGDDKLGRVTKPTKVAMPEKVK--QLSCGATHT 355
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L L++ G+V+ G+G EG+LGLG P LIP +R
Sbjct: 356 LFLAESGRVYSCGWGSEGRLGLGDNTTNRYVPTLIPFFHENG--------IR-------- 399
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V +++ GG HS V+TD G + T+G G G+
Sbjct: 400 ------VTQVSAGGAHSMVLTDEGQVYTWGCGENGK 429
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
G+++T+V+AGG H+++L+D GQV+ WG G G+LG S P L+ L
Sbjct: 397 GIRVTQVSAGGAHSMVLTDEGQVYTWGCGENGKLGHNSETN-SNIPQLVKSL 447
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 59 GCGFALATSESGKLIT--WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G L +ESG++ + WGS G T+ ++ T PF V + +AG AH
Sbjct: 351 GATHTLFLAESGRVYSCGWGSEGRLGLGDNTTNRYVPTLIPFFHENGIRVTQVSAGGAHS 410
Query: 117 VSVTEAGEVYTWG 129
+ +T+ G+VYTWG
Sbjct: 411 MVLTDEGQVYTWG 423
>gi|334330728|ref|XP_001378629.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Monodelphis
domestica]
Length = 531
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 114/317 (35%), Gaps = 91/317 (28%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + V+++G GT +S I+ LCG K + G L +
Sbjct: 32 NEAIYVTHNDEVFVFGLNCSNCLGTGDNQSTIVPKKLEALCG-KKIKSLSYGSGPHVLLS 90
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
+E G + WG G S L +G + P + T V++ A G H +++ G
Sbjct: 91 TEDGMVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAADG 147
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
EVY WG+ C G GS ST Q P K +KR
Sbjct: 148 EVYAWGYNNC----------GQVGS---GSTANQ--------PTPRKVTNCLHIKR---- 182
Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
+ +A G ++ + D G+V+GWGY G GQ
Sbjct: 183 ------------------------------VVSIACGQTSSMAVLDNGEVYGWGYNGNGQ 212
Query: 244 LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
LGLG+ L PC R +++S V +I CG H+
Sbjct: 213 LGLGNN-----GNQLTPC--------------RVAALHSVC------VLQIVCGYAHTLA 247
Query: 304 VTDAGALLTFGWGLYGQ 320
+TD G L +G YGQ
Sbjct: 248 LTDEGLLYAWGANTYGQ 264
>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
Length = 1056
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 71/266 (26%), Positives = 104/266 (39%), Gaps = 86/266 (32%)
Query: 60 CGFA--LATSESGKLITWGSADDEGQSYLTSG---KHGETPEPFPLPTEASVVKAAAGWA 114
CG A +A S+ G + WG + GQ L S K P+ + SVV+ A G
Sbjct: 92 CGKAHTVAVSDQGLVFAWGD-NSYGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCN 150
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H +++T +G ++ WG S+G GK + +E AP
Sbjct: 151 HSMALTISGHLFCWG-------------DNSSGQL---GIGKTHSSMSEPAP-------- 186
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+++LN GV ++AGG H+ LS G ++
Sbjct: 187 ------------------------------VLSLN-GVPFMLISAGGAHSFALSSSGALF 215
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
GWG GQLG+ H + DRPL S+ S G V +
Sbjct: 216 GWGKNEYGQLGV-----------------HDTT--DRPLPTLLKSLRSQG------VCYV 250
Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQ 320
+CG +H+AV+T G + TFG G GQ
Sbjct: 251 SCGEKHTAVLTSDGGVFTFGCGTSGQ 276
Score = 54.3 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 48/140 (34%), Positives = 66/140 (47%), Gaps = 35/140 (25%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI--KMVPTPHLIPCLE-----HAA 266
ITKV G HT+ +SD G V+ WG GQ+GLGS++ K+ P ++ L A
Sbjct: 87 ITKVTCGKAHTVAVSDQGLVFAWGDNSYGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIA 146
Query: 267 SGKDRPL-LVRQGSV-----NSSGKAG----RSYVKE--------------IACGGRHSA 302
G + + L G + NSSG+ G S + E I+ GG HS
Sbjct: 147 CGCNHSMALTISGHLFCWGDNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGAHSF 206
Query: 303 VVTDAGALLTFGWGL--YGQ 320
++ +GAL FGWG YGQ
Sbjct: 207 ALSSSGAL--FGWGKNEYGQ 224
Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats.
Identities = 56/203 (27%), Positives = 82/203 (40%), Gaps = 31/203 (15%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGK-HGETPEPFPLPTEASV--VKAAAGWAH 115
GC ++A + SG L WG D L GK H EP P+ + V + +AG AH
Sbjct: 148 GCNHSMALTISGHLFCWG---DNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGAH 204
Query: 116 CVSVTEAGEVYTWGWREC----------VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
+++ +G ++ WG E P + + S G K +A+ T
Sbjct: 205 SFALSSSGALFGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDG 264
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
G TS + N +P V G +T++A G HTL
Sbjct: 265 GVFTFGCG--------TSGQLGHNSN------HHEYTPRKVFELMGSVVTQIACGRAHTL 310
Query: 226 IL-SDMGQVWGWGYGGEGQLGLG 247
L G+V+ +G GG+GQLGLG
Sbjct: 311 ALVPSSGRVYTFGRGGDGQLGLG 333
Score = 40.8 bits (94), Expect = 1.0, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 32/115 (27%)
Query: 236 WGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKD-------RPLLVRQGSV-----NS 282
WG EGQLG+G + + + TP L+ LE +++ ++ L + G+V N
Sbjct: 4 WGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCGSNE 63
Query: 283 SGKAGRS---------------YVKEIACGGRHSAVVTDAGALLTFGWG--LYGQ 320
G+ G+ + ++ CG H+ V+D G L F WG YGQ
Sbjct: 64 FGQLGQEKSHTNPESVHAIETFTITKVTCGKAHTVAVSDQG--LVFAWGDNSYGQ 116
>gi|350418736|ref|XP_003491950.1| PREDICTED: hypothetical protein LOC100748540 [Bombus impatiens]
Length = 791
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 100/264 (37%), Gaps = 81/264 (30%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G +LA + G + WGS + EGQ L G +P + V + +AG+ H
Sbjct: 151 AAGSHHSLALTSDGGVFAWGS-NLEGQLGLPDVS-GLVNKPTKVHIPEPVKQISAGYYHS 208
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+TE+G VY G E S K G SF KQ LP+
Sbjct: 209 TFLTESGLVYVCGESE---SGK----LGIDASFSTQVAPKQMQLPS-------------- 247
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
P V VA GG HT+IL++ G ++
Sbjct: 248 ---------------------------------PAVH---VACGGHHTVILAENGNLYCT 271
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G GQLGLG+ + + P L+P R +L + + I+C
Sbjct: 272 GSNSSGQLGLGTNLSELHIPKLLP----------RGMLRNE------------TITRISC 309
Query: 297 GGRHSAVVTDAGALLTFGWGLYGQ 320
G H+AVVT++G L T G G +G+
Sbjct: 310 GESHTAVVTESGKLYTCGDGRHGK 333
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 56/135 (41%), Gaps = 25/135 (18%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI----PCLEHAA 266
G KI ++AAG H+L L+ G V+ WG EGQLGL +V P + P + +A
Sbjct: 144 GSKIVQIAAGSHHSLALTSDGGVFAWGSNLEGQLGLPDVSGLVNKPTKVHIPEPVKQISA 203
Query: 267 SGKDRPLLVRQGSV-----NSSGKAGR----------------SYVKEIACGGRHSAVVT 305
L G V + SGK G S +ACGG H+ ++
Sbjct: 204 GYYHSTFLTESGLVYVCGESESGKLGIDASFSTQVAPKQMQLPSPAVHVACGGHHTVILA 263
Query: 306 DAGALLTFGWGLYGQ 320
+ G L G GQ
Sbjct: 264 ENGNLYCTGSNSSGQ 278
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 21/117 (17%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
C+ L P ++T VA G HTLI + +++ G EGQLG G +
Sbjct: 81 CVKALKPE-RVTHVACGRAHTLICTGSQKIFACGSDQEGQLGRG--------------IS 125
Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ P+LV SG +G S + +IA G HS +T G + +G L GQ
Sbjct: 126 AIGDSVNTPVLVY-----DSGLSG-SKIVQIAAGSHHSLALTSDGGVFAWGSNLEGQ 176
>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
porcellus]
Length = 1050
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 131/335 (39%), Gaps = 85/335 (25%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGG-CGFALATSESGKLITWGS 77
WGY P L I A + CG S + V CGG C F L E G++ T G
Sbjct: 4 WGYWSLGQPGIGTHLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLL---EDGEVYTCG- 59
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 60 LNTKGQ--LGHEREGNQPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGA------- 110
Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
GS G +T A+P ++ ++ + + S A+ +
Sbjct: 111 ------GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALATDGQ 157
Query: 198 FFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
FFT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 158 FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMN 217
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR--PLLVRQGSVNSSGKAGRSYVKEIACG 297
GQLGL KDR P V+ V I+CG
Sbjct: 218 NAGQLGLSDE-------------------KDRESPCHVKLLRTQK--------VVYISCG 250
Query: 298 GRHSAVVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
H+AV+T +G + TFG G GQ L D +N
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQ-----LGHDSMN 280
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 108/276 (39%), Gaps = 41/276 (14%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+ + CG +LA S+ G+L +WG+ D +T+ P + ++++ +
Sbjct: 84 QHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVS 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G HC+++ G+ +TWG + + ++F S T Q E P +
Sbjct: 144 CGNWHCLALATDGQFFTWG-KNSHGQLGLGKEFPS-------QTSPQRVRSLEGIPLAQV 195
Query: 171 RAGEEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
AG S A + DE SPC V L K+ ++ G HT
Sbjct: 196 AAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA 255
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
+L+ G V+ +G G GQLG S V R +L G
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEV---------------NPRRVLELMG------- 293
Query: 286 AGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQ 320
S V +IACG +H+ A V +G + FG G GQ
Sbjct: 294 ---SEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQ 326
>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
Length = 1060
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 76/311 (24%), Positives = 118/311 (37%), Gaps = 86/311 (27%)
Query: 13 KMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVC-GGGCGFALATSESGK 71
KM C G+ T P K P +S RL +++ C G +LA + G+
Sbjct: 56 KMYACGNNDHGQLGHDLDTLPNKRPRMSRF-KRLTSLENYIITCISCGTAHSLALTNWGQ 114
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGEVYTWG 129
+ +WGS + GQ ++G P P + + VV+ A+G HC+++T GE+Y WG
Sbjct: 115 VFSWGS-NAVGQ-LGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWG 172
Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
+ S+ + G S E+ P
Sbjct: 173 ----------------SNSYGQLGIGTTS----EKVP----------------------- 189
Query: 190 ENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
P L+ GV I +A GG H+ +S G ++GWG GQLGL
Sbjct: 190 ------------MPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLND- 236
Query: 250 IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA 309
+ + P +R ++ S G V+ I+CG S +T+ G
Sbjct: 237 ----------------LNSRCYPTQLR--TLRSLG------VRYISCGDDFSVFLTNEGG 272
Query: 310 LLTFGWGLYGQ 320
+ T G G +GQ
Sbjct: 273 VFTCGAGTFGQ 283
Score = 45.4 bits (106), Expect = 0.036, Method: Composition-based stats.
Identities = 56/208 (26%), Positives = 84/208 (40%), Gaps = 51/208 (24%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT------EASVVKAAAGWAHCV 117
LA + +G+L WGS SY G G T E P+PT + A G H
Sbjct: 160 LALTNNGELYAWGS-----NSYGQLGI-GTTSEKVPMPTLIQSLAGVPIAFIACGGNHSF 213
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
+V+++G ++ GW + FG G +S + L T ++ +
Sbjct: 214 AVSKSGAIF--GWGK--------NTFGQLGLNDLNSRCYPTQLRTLRS-----------L 252
Query: 178 KRRKTSSAREESENPASGDEFFTLSP----------CLVTLNP-------GVKITKVAAG 220
R S + S + FT C + P G KIT++A G
Sbjct: 253 GVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPRKVFELMGSKITQIACG 312
Query: 221 GRHTL-ILSDMGQVWGWGYGGEGQLGLG 247
RHTL + G+++G+G GG GQLG+G
Sbjct: 313 RRHTLAFVPSRGKIYGFGLGGVGQLGIG 340
>gi|348530942|ref|XP_003452969.1| PREDICTED: hypothetical protein LOC100696645 [Oreochromis
niloticus]
Length = 1384
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 25/107 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
+T+V GG HT++L++ V+ +G G GQLG G+ + V HL L+H + K
Sbjct: 246 VTRVCCGGEHTVVLTEKN-VYTFGRGQYGQLGHGTFLFEV---HLPKALQHFCNSK---- 297
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ IACG H+AVVTD+G L TFG G +G+
Sbjct: 298 -----------------VRHIACGENHTAVVTDSGLLYTFGDGRHGK 327
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 27/128 (21%)
Query: 193 ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
A GDE F P V + G + V+ G +H+ ++ G+++ +G G+LGL K
Sbjct: 174 AFGDEGFAAEPREVHV--GEAVIWVSCGYKHSAFVTVYGRLYTFGESANGRLGLQ---KE 228
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
H +P G +V + CGG H+ V+T+ + T
Sbjct: 229 QLANHRVPQQVQGVLG---------------------HVTRVCCGGEHTVVLTEKN-VYT 266
Query: 313 FGWGLYGQ 320
FG G YGQ
Sbjct: 267 FGRGQYGQ 274
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Query: 290 YVKEIACGGRHSAVVTDAGALLTFG---WGLYGQRM 322
+ K ++CGG HSAV+T+ G LL FG WG G R+
Sbjct: 37 HPKHMSCGGEHSAVITENGRLLMFGGNTWGQLGLRI 72
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA 114
+ GC + A +E G+L WG D + G G EP + +V+ + G+
Sbjct: 145 MLSAGCNTSAALTEDGRLFMWG---DNSVGQIAFGDEGFAAEPREVHVGEAVIWVSCGYK 201
Query: 115 HCVSVTEAGEVYTWG 129
H VT G +YT+G
Sbjct: 202 HSAFVTVYGRLYTFG 216
>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
Length = 1049
Score = 65.1 bits (157), Expect = 5e-08, Method: Composition-based stats.
Identities = 80/313 (25%), Positives = 126/313 (40%), Gaps = 77/313 (24%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLQGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPP-----SDK--RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
+A +K + G + +++TS P L+ G+ +
Sbjct: 154 KASEVFCWGQNKYGQLGLGIECQKQTS-------------------PQLIKSLLGIPFMQ 194
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR 271
VAAGG H+ +L+ G ++GWG GQLGL P+L+ L + G+D
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDH 253
Query: 272 -PLLVRQGSVNSSGKAGR----------------------SYVKEIACGGRH-SAVVTDA 307
L ++G V + G G S V +IACG +H SA V +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSS 313
Query: 308 GALLTFGWGLYGQ 320
G + +FG G GQ
Sbjct: 314 GRIYSFGLGGNGQ 326
>gi|297811737|ref|XP_002873752.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297319589|gb|EFH50011.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 396
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 113/302 (37%), Gaps = 52/302 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +LA + GKL TWG + K TP +V+AA G HC+
Sbjct: 45 GGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLASVKIVQAAIGGWHCL 104
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF-QKDSTGK----QSALPTEQAPPSDKR- 171
+V + G Y WG E +G G KD TG+ +P AP R
Sbjct: 105 AVDDQGRAYAWGGNE----------YGQCGEEPSKDETGRPVRRDIVIPKRCAPQLTVRQ 154
Query: 172 ---AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
G V + + GD P V V++ +A G H L L
Sbjct: 155 VAAGGTHSVVLTREGYVWTWGQPWPPGDIKQISIPVRVQGLENVRL--IAVGAFHNLALK 212
Query: 229 DMGQVWGWGYGGEGQLGLG-SRIKMVPTP----HLIPCLEHAASGKDRPLLVRQGSVNSS 283
+ G +W WG GQLG G ++ + P P + ++ AA G L +G V
Sbjct: 213 EDGTLWAWGNNEYGQLGTGDTQPRSFPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGW 272
Query: 284 GK-------------------------AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
G+ AG + +++CGG HS +T G + +FG G +
Sbjct: 273 GRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDII-QVSCGGTHSVALTRDGRIFSFGRGDH 331
Query: 319 GQ 320
G+
Sbjct: 332 GR 333
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI---KM 252
D+ + P V L G I +V+ GG H++ L+ G+++ +G G G+LG G ++ +
Sbjct: 286 DKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQP 345
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+ P IP LE + D G+ K +ACGGRH+ + +
Sbjct: 346 LELPIDIPPLEGRFNHTDEE------------DDGKWIAKHVACGGRHTLAIVE 387
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 62/156 (39%), Gaps = 40/156 (25%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
DE L+ + L P + V G R++L + D G+++ WG+ G LG K T
Sbjct: 23 DEEKELASVVEALEP-FNVRSVVGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTEST 81
Query: 256 PHLIPCL------------------------------EHAASGKD-------RPLLVRQG 278
P L+ L E+ G++ RP VR+
Sbjct: 82 PSLVKSLASVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRP--VRRD 139
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
V A + V+++A GG HS V+T G + T+G
Sbjct: 140 IVIPKRCAPQLTVRQVAAGGTHSVVLTREGYVWTWG 175
>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
Length = 1057
Score = 65.1 bits (157), Expect = 5e-08, Method: Composition-based stats.
Identities = 80/313 (25%), Positives = 126/313 (40%), Gaps = 77/313 (24%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLQGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPP-----SDK--RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
+A +K + G + +++TS P L+ G+ +
Sbjct: 154 KASEVFCWGQNKYGQLGLGIECQKQTS-------------------PQLIKSLLGIPFMQ 194
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR 271
VAAGG H+ +L+ G ++GWG GQLGL P+L+ L + G+D
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDH 253
Query: 272 -PLLVRQGSVNSSGKAGR----------------------SYVKEIACGGRH-SAVVTDA 307
L ++G V + G G S V +IACG +H SA V +
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSS 313
Query: 308 GALLTFGWGLYGQ 320
G + +FG G GQ
Sbjct: 314 GRIYSFGLGGNGQ 326
>gi|443293653|ref|ZP_21032747.1| Regulator of chromosome condensation, RCC1 [Micromonospora lupini
str. Lupac 08]
gi|385883511|emb|CCH20898.1| Regulator of chromosome condensation, RCC1 [Micromonospora lupini
str. Lupac 08]
Length = 710
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 114/278 (41%), Gaps = 54/278 (19%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGET--PEPFPLPTEASVVKAAAGWAHCVSV 119
++LA + +G ++ WG+ +D+GQ L +G + ++ P P LP ++ AA H +++
Sbjct: 167 YSLALTATGTVLAWGN-NDQGQ--LGNGTNTDSYLPVPLALPAATTITAIAAATNHGLAL 223
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
T G V WG + + G+ G+ +T ALP + AG +
Sbjct: 224 TSNGTVLAWG-------SNGSGQLGN-GNTTNSNTPVTVALPAGTTITAIAAAGSHSMAL 275
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
T + ++ T+ P + G+ IT VA+G H+L L+ G+V+ WG
Sbjct: 276 TSTGTVLTWGQD--------TVLPIPIVFPAGITITAVASGNDHSLALTSTGKVFTWGAN 327
Query: 240 GEGQLGLGSRIK-MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
G LG G+ VP P +P + + IA G
Sbjct: 328 YFGSLGNGTFANSSVPVPASVPT--------------------------DTTITAIAGGN 361
Query: 299 RHSAVVTDAGALLTFGWGLYGQRMAKCLAGDGINMGSW 336
S +T G LL +G YGQ G+G GSW
Sbjct: 362 AQSLALTSTGKLLAWGRNNYGQ------VGNGTRTGSW 393
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 84/242 (34%), Gaps = 77/242 (31%)
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
LPT ++ AAG H +++T G V WG T +G G+ K
Sbjct: 94 LPTGTTISDVAAGAVHSLALTSTGTVLAWG----------TNYYGVLGNGTK-------- 135
Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
++N A D + P V L G +T VAA
Sbjct: 136 -----------------------------TDNSAQNDSYV---PAAVHLPAGTTVTSVAA 163
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDRP----LL 274
++L L+ G V WG +GQLG G+ +P P +P + L
Sbjct: 164 SSTYSLALTATGTVLAWGNNDQGQLGNGTNTDSYLPVPLALPAATTITAIAAATNHGLAL 223
Query: 275 VRQGSV-----NSSGKAGR-----------------SYVKEIACGGRHSAVVTDAGALLT 312
G+V N SG+ G + + IA G HS +T G +LT
Sbjct: 224 TSNGTVLAWGSNGSGQLGNGNTTNSNTPVTVALPAGTTITAIAAAGSHSMALTSTGTVLT 283
Query: 313 FG 314
+G
Sbjct: 284 WG 285
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 55/140 (39%), Gaps = 27/140 (19%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLI 259
LSP V L G I+ VAAG H+L L+ G V WG G LG G++ +
Sbjct: 87 LSPVRVHLPTGTTISDVAAGAVHSLALTSTGTVLAWGTNYYGVLGNGTKTDNSAQNDSYV 146
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
P H +G + V +A +S +T G +L +G G
Sbjct: 147 PAAVHLPAG--------------------TTVTSVAASSTYSLALTATGTVLAWGNNDQG 186
Query: 320 QRMAKCLAGDGINMGSWVWV 339
Q G+G N S++ V
Sbjct: 187 QL------GNGTNTDSYLPV 200
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
PIP G + V G +LA + +GK+ TWG A+ G + + P P +
Sbjct: 291 PIPIVFPAGITITAVASGN-DHSLALTSTGKVFTWG-ANYFGSLGNGTFANSSVPVPASV 348
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
PT+ ++ A G A +++T G++ WG
Sbjct: 349 PTDTTITAIAGGNAQSLALTSTGKLLAWG 377
>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
Length = 546
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 117/302 (38%), Gaps = 61/302 (20%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
++ +L P + +DV GCG + + G + T G +D GQ L K
Sbjct: 18 DEEIVLEPRRSDFFVNKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW-----------RECVPSAKVT 140
+ PE ++V A G AH +++ + G+VY WG EC+ +V
Sbjct: 72 RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECI---RVP 128
Query: 141 RDFGSAGSFQ--KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
R+ S Q + + G +L +A + + ++++
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQT--------- 179
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
SP L+ G+ +VAAGG H+ +L+ G ++GWG GQLGL P+L
Sbjct: 180 ---SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNL 235
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ L + I CG H+A +T G + TFG G Y
Sbjct: 236 LKSLRSQK------------------------IVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 319 GQ 320
GQ
Sbjct: 272 GQ 273
>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
carolinensis]
Length = 526
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 92/218 (42%), Gaps = 32/218 (14%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
LCG G G +AT+E G++ TWG S L +G + P + T
Sbjct: 71 LCGKKITCLSYGSGPHVVVATAE-GEVYTWGH---NAYSQLGNGTTNNSLLPCQISTNLV 126
Query: 105 --SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
V + A G H + +T GEVYTWG + ++G ST Q A+P
Sbjct: 127 NKKVTEVACGSHHSMILTSDGEVYTWG-------------YNNSGQVGSGSTANQ-AIPR 172
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPA----SGDEFFTL-------SPCLVTLNPG 211
+ + + S A E+ +G+ L +PC + G
Sbjct: 173 RVTSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGNSGNQPTPCRIAALQG 232
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
+++ +VA G HTL+L+D GQ++ WG GQLG G+R
Sbjct: 233 IRVQRVACGYAHTLVLTDEGQMYAWGANSYGQLGTGNR 270
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 29/150 (19%)
Query: 200 TLSPCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
+L PC ++ N K+T+VA G H++IL+ G+V+ WGY GQ+G GS +
Sbjct: 115 SLLPCQISTNLVNKKVTEVACGSHHSMILTSDGEVYTWGYNNSGQVGSGSTANQAIPRRV 174
Query: 259 IPCLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 175 TSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGNSGNQPTPCRIAALQGIR 234
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 235 VQRVACGYAHTLVLTDEGQMYAWGANSYGQ 264
>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Gorilla gorilla gorilla]
Length = 979
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 133/331 (40%), Gaps = 66/331 (19%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
++ +L P + +DV GCG + + G + T G +D GQ L K
Sbjct: 18 DEEIVLEPRKSDFFINKRIRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW-----------RECVPSAKVT 140
+ PE ++V + G AH +++ + G+VY WG EC+ +V
Sbjct: 72 RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECI---RVP 128
Query: 141 RDFGSAGSFQ--KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
R+ S Q + + G +L +A + + + ++++
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT--------- 179
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
SP L+ G+ +VAAGG H+ +L+ G ++GWG GQLGL P+L
Sbjct: 180 ---SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNL 235
Query: 259 IPCLE-----HAASGKDR-PLLVRQGSVNSSGKAGR----------------------SY 290
+ L + G+D L ++G V + G G S
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 291 VKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V EIACG +H SA V +G + +FG G GQ
Sbjct: 296 VTEIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
Length = 1699
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 100/237 (42%), Gaps = 32/237 (13%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
+++G+L T+G +D GQ L +H TP+ V A G H + T AGE
Sbjct: 483 VITDAGELYTFG-MNDCGQLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICTAAGE 541
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG------EEVVK 178
++T G D+G G + +Q LPT A P++ + VV
Sbjct: 542 LFTCG----------KNDYGQLGL----AHNRQIKLPTLVALPNEMVSFVACGYYHSVVV 587
Query: 179 R---RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
R S R + G + P +V L+ ++ + G HT++LS+ GQV+
Sbjct: 588 STGGRAFSFGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVLLSEQGQVYV 647
Query: 236 WGYGGEGQLG-LGSRIKMVPTPHLI-------PCLEHAASGKDRPLLVRQGSVNSSG 284
+G +GQLG GS ++P P + C++ AA L+V + N G
Sbjct: 648 FGRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCVDVAAGFYTTSLIVERKRENDDG 704
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 51/125 (40%), Gaps = 24/125 (19%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
+ L P + VK + G H + L+D G + WGY GQLG + +
Sbjct: 400 ERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDRGQLGHENLATKIHV 459
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
P LI L KD+ L G A SY HSAV+TDAG L TFG
Sbjct: 460 PKLIESL------KDKKL----------GFASVSY--------HHSAVITDAGELYTFGM 495
Query: 316 GLYGQ 320
GQ
Sbjct: 496 NDCGQ 500
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 102/282 (36%), Gaps = 68/282 (24%)
Query: 58 GGCGFALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
GC +A +++G +WG D G L + H P+ + + A+ + H
Sbjct: 423 NGCEHMIALTDTGLAYSWGYNDRGQLGHENLATKIH--VPKLIESLKDKKLGFASVSYHH 480
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
+T+AGE+YT+G +C G D T QS T Q S E
Sbjct: 481 SAVITDAGELYTFGMNDC-------------GQLGLDHTQHQS---TPQLVKS-----LE 519
Query: 176 VVKRRKTSSAREESENPASGDEFFTLS-----------------PCLVTLNPGVKITKVA 218
+ + + + E FT P LV L P ++ VA
Sbjct: 520 ATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLAHNRQIKLPTLVAL-PNEMVSFVA 578
Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
G H++++S G+ + +G GQLG+GS+ V Q
Sbjct: 579 CGYYHSVVVSTGGRAFSFGRNDYGQLGIGSK-------------------------VHQN 613
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
N + + + CG H+ ++++ G + FG GQ
Sbjct: 614 VPNVVALSSNTRMVRATCGCYHTVLLSEQGQVYVFGRNNKGQ 655
>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
Length = 928
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 120/309 (38%), Gaps = 75/309 (24%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
++ +L P + +DV GCG + + G + T G +D GQ L K
Sbjct: 18 DEEIVLEPRRSDFFVNKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW-----------RECVPSAKVT 140
+ PE ++V A G AH +++ + G+VY WG EC+ +V
Sbjct: 72 RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECI---RVP 128
Query: 141 RDFGSAGSFQ--KDSTGKQSALPTEQAPP-----SDK--RAGEEVVKRRKTSSAREESEN 191
R+ S Q + + G +L +A +K + G + +++TS
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTS-------- 180
Query: 192 PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
P L+ G+ +VAAGG H+ +L+ G ++GWG GQLGL
Sbjct: 181 -----------PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
P+L+ L + I CG H+A +T G +
Sbjct: 230 RY-VPNLLKSLRSQK------------------------IVYICCGEDHTAALTKEGGVF 264
Query: 312 TFGWGLYGQ 320
TFG G YGQ
Sbjct: 265 TFGAGGYGQ 273
>gi|410906431|ref|XP_003966695.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Takifugu rubripes]
Length = 726
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 107/268 (39%), Gaps = 87/268 (32%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA 114
+ G + A +ESGKL WG + EGQ L H +P+ + S V + G+
Sbjct: 145 MLAAGSNTSAALTESGKLFMWGD-NTEGQIGLAKESHAPSPQEVDVGGPISWV--SCGYY 201
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H VT G +YT+G EC D G G L TEQ P
Sbjct: 202 HSAFVTADGALYTFG--EC--------DSGKLG------------LTTEQLP-------- 231
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
R + + + P +T+VA GG HT+ L++ +++
Sbjct: 232 ----RHRVPQMVKSIKEP---------------------VTQVACGGGHTVALTEE-RLF 265
Query: 235 GWGYGGEGQLGLGSRI--KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
+G G GQLG G+ I +P P +EH G+ V
Sbjct: 266 TFGLGQFGQLGHGTFIFESRLPRP-----VEHFKKGR---------------------VC 299
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQ 320
++ACG H+AV+TD G L TFG G +G+
Sbjct: 300 QVACGENHTAVITDGGLLYTFGDGRHGK 327
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 53/130 (40%), Gaps = 30/130 (23%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--------RIKMVPTPHLIPCLEH 264
K+ VA G HTLI + G+V+ G EGQLGLG RI + L P
Sbjct: 89 KVLLVACGRNHTLICTAQGKVFSSGGNSEGQLGLGDCEERTTFQRIHAFDS--LGPVKML 146
Query: 265 AASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IACGGRHSAVV 304
AA L G + N+ G+ G + ++CG HSA V
Sbjct: 147 AAGSNTSAALTESGKLFMWGDNTEGQIGLAKESHAPSPQEVDVGGPISWVSCGYYHSAFV 206
Query: 305 TDAGALLTFG 314
T GAL TFG
Sbjct: 207 TADGALYTFG 216
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 30/134 (22%)
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH-----AASGKD 270
K+A G HT +++ G+++ +G GQLGLGS+ + V P + L+ A G++
Sbjct: 40 KIACGDEHTALITKNGRLFMFGSNNWGQLGLGSK-RTVNKPTCVKALKTEKVLLVACGRN 98
Query: 271 RPLL-VRQGSV-----NSSGKAG-----------RSY-------VKEIACGGRHSAVVTD 306
L+ QG V NS G+ G R + VK +A G SA +T+
Sbjct: 99 HTLICTAQGKVFSSGGNSEGQLGLGDCEERTTFQRIHAFDSLGPVKMLAAGSNTSAALTE 158
Query: 307 AGALLTFGWGLYGQ 320
+G L +G GQ
Sbjct: 159 SGKLFMWGDNTEGQ 172
>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
Length = 1014
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 104/277 (37%), Gaps = 62/277 (22%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+L +G+L ++G + GQ + E P+ P V + G H ++V
Sbjct: 35 SLLLLSNGELHSYGD-NSHGQLGRRDVQRQEQPKRIPALETLRVDLVSCGKEHSLAVCYK 93
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
G V+ WG GS G + + +P + +D +K +
Sbjct: 94 GRVFAWGA-------------GSEGQLGIGEFNEINLIPRKIKTLTD-------IKIIQV 133
Query: 183 SSAREESENPASGDEFFT------------------LSPCLVTLNPGVKITKVAAGGRHT 224
S S + FT SP V G+ +T+VAAGG H+
Sbjct: 134 SCGHHHSLALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGIPLTQVAAGGAHS 193
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH-LIPCLEHAASGKDRPLLVRQGSVNSS 283
LS G +GWG EGQL L R K VP PC SV++
Sbjct: 194 FALSLSGASFGWGSNSEGQLAL--RKKNVPVVQSSKPC-----------------SVDAL 234
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G Y I+CG H+AV+T G + TFG YGQ
Sbjct: 235 ENLGVVY---ISCGYEHTAVLTQTGKVFTFGGNSYGQ 268
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 116/292 (39%), Gaps = 59/292 (20%)
Query: 43 PARLCGGDSWK-DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET---PEPF 98
P R+ ++ + D+ G +LA G++ WG A EGQ L G+ E P
Sbjct: 66 PKRIPALETLRVDLVSCGKEHSLAVCYKGRVFAWG-AGSEGQ--LGIGEFNEINLIPRKI 122
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW---------RECVPSAKVTR-DFGSAGS 148
T+ +++ + G H ++++E G ++TWG +EC A R F
Sbjct: 123 KTLTDIKIIQVSCGHHHSLALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGIP 182
Query: 149 FQKDSTGKQSALPTEQAPPSD---KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCL 205
+ + G + + S + ++ R+K + S+ PC
Sbjct: 183 LTQVAAGGAHSFALSLSGASFGWGSNSEGQLALRKKNVPVVQSSK------------PCS 230
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
V + + ++ G HT +L+ G+V+ +G GQLG PT
Sbjct: 231 VDALENLGVVYISCGYEHTAVLTQTGKVFTFGGNSYGQLGYS------PT---------- 274
Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWG 316
+GK+ P LV G G V +I CG H+ A V G +++FG G
Sbjct: 275 -AGKEGPQLV-------EGIDG--LVSQIDCGSYHTLAYVYTTGKVVSFGRG 316
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 30/139 (21%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH-----A 265
G ++ + A+G RH+L+L G++ +G GQLG ++ P IP LE
Sbjct: 22 GAELRQAASGERHSLLLLSNGELHSYGDNSHGQLG-RRDVQRQEQPKRIPALETLRVDLV 80
Query: 266 ASGKDRPLLV-RQGSV-----NSSGKAGRSYVKEI------------------ACGGRHS 301
+ GK+ L V +G V S G+ G EI +CG HS
Sbjct: 81 SCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDIKIIQVSCGHHHS 140
Query: 302 AVVTDAGALLTFGWGLYGQ 320
+++ G L T+G +GQ
Sbjct: 141 LALSEDGRLFTWGSNSHGQ 159
>gi|146169381|ref|XP_001471365.1| regulator of chromosome condensation [Tetrahymena thermophila]
gi|146145109|gb|EDK31655.1| regulator of chromosome condensation [Tetrahymena thermophila
SB210]
Length = 448
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 114/286 (39%), Gaps = 47/286 (16%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
I CG D V G + + ++ GKL GQ L ++ P+
Sbjct: 24 IHQLACGLDHTAFVAKNGYLYTMGSNALGKLGI-------GQQSL---QNSFQPQLVSAL 73
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
++ V++ + G +H ++ ++GE+++WG S++ S GS S L
Sbjct: 74 SKYKVMQVSCGHSHTCAIIDSGELFSWG-----DSSEGQLGINSNGSHYNPQLVNFSDLK 128
Query: 162 TEQAPPSDKRAGE----EVVKRRKTSSAREESE-NPASGDEFFTLSPCLVTLNPGVKITK 216
+D G V+K + S + +G++ P L LN +I K
Sbjct: 129 GINTFVTDVSCGYYHTVAVLKNGQVCSFGSGKKGQLGTGNQNKQYKPFL--LNSLSQIIK 186
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
V G HTL L + G+V+ G EGQLG G + +P L+ LEH
Sbjct: 187 VKCGFYHTLFLDESGRVYSCGLNDEGQLGQGHNEGNISSPRLVLELEH------------ 234
Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQRM 322
S++K+I G HSA +TDA + FG GQ +
Sbjct: 235 ------------SFIKKIF-AGSHSAAITDANEIYFFGKSQLGQFL 267
>gi|301755558|ref|XP_002913646.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC6-like [Ailuropoda melanoleuca]
Length = 1189
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 64/152 (42%), Gaps = 31/152 (20%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL- 258
L P + G+KI +V+ G H+L LS+ GQV+ WG GQLGLG +P
Sbjct: 116 NLIPTKIKTLTGIKIIQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRV 175
Query: 259 -----IPCLEHAASGKDR------------------PLLVRQGSVNSSGKAGRSY----- 290
IP + AA G L +RQ +V RS
Sbjct: 176 RSLDGIPLTQVAAGGAHSFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKN 235
Query: 291 --VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V I+CG H+AV+T G + TFG YGQ
Sbjct: 236 LGVIYISCGYEHTAVLTQTGKVFTFGGNSYGQ 267
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 35/137 (25%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG--SRIKMVPTPHLIPCLE----- 263
+++ V+ G H+L + G+V+ WG G EGQLG+G I ++PT I L
Sbjct: 74 NLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLIPTK--IKTLTGIKII 131
Query: 264 HAASGKDRPLLVRQG------SVNSSGKAG--------------RSY----VKEIACGGR 299
+ G L + +G NS G+ G RS + ++A GG
Sbjct: 132 QVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGGA 191
Query: 300 HSAVVTDAGALLTFGWG 316
HS ++ +GA +FGWG
Sbjct: 192 HSFALSLSGA--SFGWG 206
>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
Length = 1017
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 105/282 (37%), Gaps = 87/282 (30%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG +LA S+ G+L +WG+ D +T+ P + ++++ +
Sbjct: 131 QNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVS 190
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G HC+++ G+ +TWG G G GK+ P+ QA P
Sbjct: 191 CGNWHCLALAADGQFFTWG----------KNSHGQLG------LGKE--FPS-QASPQRV 231
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
R+ E G+ + +VAAGG H+ LS
Sbjct: 232 RSLE------------------------------------GIPLAQVAAGGAHSFALSLS 255
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
G V+ WG GQLGL E S LL Q V
Sbjct: 256 GAVFAWGMNNAGQLGLSDE-------------EDRESPCHVKLLRTQKVV---------- 292
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
I+CG H+AV+T +G + TFG G GQ L D +N
Sbjct: 293 --YISCGEEHTAVLTKSGGVFTFGAGSCGQ-----LGHDSMN 327
>gi|395521017|ref|XP_003764618.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sarcophilus
harrisii]
Length = 531
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 106/294 (36%), Gaps = 87/294 (29%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT +S I+ LCG K + G L ++E G + WG G S L +G
Sbjct: 55 GTGDNQSTIVPKKLEALCG-KKIKSLSYGSGPHVLLSTEDGVVYAWGH---NGYSQLGNG 110
Query: 90 KHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
+ P + T V++ A G H +++ GEVY WG+ C G
Sbjct: 111 TTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAADGEVYAWGYNNC----------GQV 160
Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLV 206
GS ST Q P K +KR
Sbjct: 161 GS---GSTANQ--------PTPRKVTNCLHIKR--------------------------- 182
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA 266
+ +A G ++ + D G+V+GWGY G GQLGLG+ L PC
Sbjct: 183 -------VVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNN-----GNQLTPC----- 225
Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
R +++S V +I CG H+ +TD G L +G YGQ
Sbjct: 226 ---------RVAALHSVC------VLQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S P P ++ K V CG ++A ++G++ WG
Sbjct: 149 VYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L + + TP V++ G+AH +++T+ G +Y WG
Sbjct: 208 NGNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWG 258
>gi|354500509|ref|XP_003512342.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Cricetulus
griseus]
gi|344258048|gb|EGW14152.1| RCC1 and BTB domain-containing protein 1 [Cricetulus griseus]
Length = 531
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 118/321 (36%), Gaps = 89/321 (27%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GASANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEV+ WG+ C G GS ST Q PT
Sbjct: 144 AADGEVFAWGYNNC----------GQVGS---GSTANQ---PTP---------------- 171
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
RK +S CL T ++ +A G ++ + D G+V+GWGY
Sbjct: 172 RKVTS-------------------CLHT----KRVVSIACGQTSSMAVLDSGEVYGWGYN 208
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G GQLGLG+ + TP + L+ V +I CG
Sbjct: 209 GNGQLGLGNNGNQL-TPVRVAALQSVC------------------------VNQIVCGYA 243
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
H+ +TD G L +G YGQ
Sbjct: 244 HTLALTDEGLLYAWGANTYGQ 264
>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
Length = 979
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 133/331 (40%), Gaps = 66/331 (19%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
++ +L P + +DV GCG + + G + T G +D GQ L K
Sbjct: 18 DEEIVLEPRKSDFFINKRVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW-----------RECVPSAKVT 140
+ PE ++V + G AH +++ + G+VY WG EC+ +V
Sbjct: 72 RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECI---RVP 128
Query: 141 RDFGSAGSFQ--KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
R+ S Q + + G +L +A + + + ++++
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT--------- 179
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
SP L+ G+ +VAAGG H+ +L+ G ++GWG GQLGL P+L
Sbjct: 180 ---SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNL 235
Query: 259 IPCLE-----HAASGKDR-PLLVRQGSVNSSGKAGR----------------------SY 290
+ L + G+D L ++G V + G G S
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 291 VKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
V EIACG +H SA V +G + +FG G GQ
Sbjct: 296 VTEIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Sarcophilus harrisii]
Length = 979
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 115/317 (36%), Gaps = 91/317 (28%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
++ +L P + +DV GCG + + G + T G +D GQ L K
Sbjct: 18 DEEIVLEPRKSDFFINKKVQDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
+ PE ++V + G AH +++ + G+VY WG
Sbjct: 72 RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
T Q LP G E + P +
Sbjct: 111 -DTDGQLGLP---------------------------------GTEEYIRVPRNIKSLTD 136
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I ++A G H+L LS +V+ WG GQLGLG +K +P L IP + A
Sbjct: 137 IQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----------------YVKEIACGGRHSAV 303
A G +L G++ N G+ G + + I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VTDAGALLTFGWGLYGQ 320
+T G + TFG G YGQ
Sbjct: 257 LTKEGGVFTFGAGGYGQ 273
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 113/282 (40%), Gaps = 34/282 (12%)
Query: 43 PARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLT-SGKHGETPEPFP 99
P ++ D+ +++ CG A LA ++ G++ WG D +GQ L + ++ P
Sbjct: 75 PEQVVALDA-QNIVAVSCGEAHTLALNDKGQVYAWG-LDTDGQLGLPGTEEYIRVPRNIK 132
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
T+ +V+ A G+ H +++++ EV++WG + ++ F
Sbjct: 133 SLTDIQIVQIACGYYHSLALSKGSEVFSWGQNK---HGQLGLGFELKRQSSPQLIKSLLG 189
Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
+P Q + + R + DE P L+ KI +
Sbjct: 190 IPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICC 249
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
G HT L+ G V+ +G GG GQLG S T H I R + GS
Sbjct: 250 GEDHTAALTKEGGVFTFGAGGYGQLGHNS------TSHEI---------NPRKVFELMGS 294
Query: 280 VNSSGKAGRSYVKEIACGGRH-SAVVTDAGALLTFGWGLYGQ 320
+ V +IACG +H SA V +G + +FG G GQ
Sbjct: 295 I----------VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326
>gi|355694501|gb|AER99690.1| hect domain and RLD 5 [Mustela putorius furo]
Length = 675
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 108/237 (45%), Gaps = 52/237 (21%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEASVV 107
K + CG +LA S+ G+L WG + GQ L G+ TP+ + +V
Sbjct: 47 KSIIQITCGDYHSLALSKGGELFAWGQ-NLHGQ--LGIGRLFASIPTPQLVEHLSGVPLV 103
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWR-------------------ECVPSAKVTRDFGSAGS 148
+ +AG AH ++++ +G +Y+WG E + S KV +F + G
Sbjct: 104 QISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKV--EFLACG- 160
Query: 149 FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTL 208
G +AL TE AG + ++N L P LVT
Sbjct: 161 ------GSHTALLTEDGQVFTFGAG------KHGQLGHNSTQNE--------LRPRLVTE 200
Query: 209 NPGVKITKVAAGGRHTL-ILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTPHLIPCLE 263
G+++T+VA G RHTL +SD+G+V+ +G G EGQLG G+ +++P P +P E
Sbjct: 201 LTGIRVTQVACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNE 257
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 28/135 (20%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAAS 267
I ++ G H+L LS G+++ WG GQLG+G +PTP L +P ++ +A
Sbjct: 49 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLVQISAG 108
Query: 268 GKDRPLLVRQGSV-----NSSGKAGRSY-----------------VKEIACGGRHSAVVT 305
L G++ N G+ G + V+ +ACGG H+A++T
Sbjct: 109 KAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGSHTALLT 168
Query: 306 DAGALLTFGWGLYGQ 320
+ G + TFG G +GQ
Sbjct: 169 EDGQVFTFGAGKHGQ 183
>gi|355693002|gb|EHH27605.1| RCC1 domain-containing protein 1 [Macaca mulatta]
Length = 376
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 41/198 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL E+G++ +WG G+HG+ E P EA ++ +
Sbjct: 166 GAEHALLLDEAGQVFSWGG-----------GRHGQLGHGTLEAELEPRLLEALQGLTMAE 214
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPP 167
AAG H V V+E G++Y WGW E A TR+ G + +++TG
Sbjct: 215 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLN---------- 264
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
E+ + ++T + + P + F P L+ L G KV+ G RHT ++
Sbjct: 265 ------EDGSQVKRTGRVEDGAPAPFIAVQPF---PALLDLPLGSDAVKVSCGSRHTAVV 315
Query: 228 SDMGQVWGWGYGGEGQLG 245
+ G+++ WG+G GQLG
Sbjct: 316 TRTGELYTWGWGKYGQLG 333
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 17/135 (12%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L +R + +
Sbjct: 199 LEPRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETV- 256
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK---------------EIACGGRHSAVVT 305
E +D + R G V A V+ +++CG RH+AVVT
Sbjct: 257 AREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVT 316
Query: 306 DAGALLTFGWGLYGQ 320
G L T+GWG YGQ
Sbjct: 317 RTGELYTWGWGKYGQ 331
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 101/262 (38%), Gaps = 46/262 (17%)
Query: 86 LTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD-FG 144
L SG+ + P PL V + +A W++ VT G V +A RD +
Sbjct: 21 LGSGRGHQVHSPSPLRAGVDVCRVSASWSYTAFVTRGGHVELS--GSASGAAGGCRDAWA 78
Query: 145 SAGSFQKDSTGK-QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF--FTL 201
S G G AL AP S R GE + A EE ++P + L
Sbjct: 79 SEGLLLVLRAGPGPEALLQAWAPDSALR-GEPLWAHNVVPEAVEE-DDPGGEAQIGRLPL 136
Query: 202 SPC-----------LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
PC L P ++ ++ G H L+L + GQV+ WG G GQLG G+ +
Sbjct: 137 LPCARAPVSPRPPFYRPLAPELRARQLELGAEHALLLDEAGQVFSWGGGRHGQLGHGT-L 195
Query: 251 KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGAL 310
+ P L+ L+ + E+A GG HS V++ G +
Sbjct: 196 EAELEPRLLEALQGLT------------------------MAEVAAGGWHSVCVSETGDI 231
Query: 311 LTFGWGLYGQRM--AKCLAGDG 330
+GW GQ + LA DG
Sbjct: 232 YIWGWNESGQLALPTRNLAEDG 253
>gi|301117544|ref|XP_002906500.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107849|gb|EEY65901.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 4048
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 117/306 (38%), Gaps = 56/306 (18%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYL-TS 88
GT E+ I +P+ A L G GC LA + G + +WG +D GQ L ++
Sbjct: 532 GTFEERVIIATPVRA-LSGIAISMVAAANGCEHMLAVASDGAVFSWG-YNDRGQLGLGST 589
Query: 89 GKHGETPEPFP-LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
TP L + + AA + H V+ GE+ T+G +C G
Sbjct: 590 ISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFGMNDC-------------G 636
Query: 148 SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF-------- 199
D T Q P S + + T +A + E + G +
Sbjct: 637 QLGLDHTQHQHT-PQVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLGHA 695
Query: 200 --TLSPCLVTLNPG---VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
+P LV + G KI V+ G HT+ +S+ G++ WG GQLG+GS+
Sbjct: 696 RNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSK----- 750
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
EH S + PL + S +K +CG HS ++ G ++ FG
Sbjct: 751 --------EHKNSAQFVPLPM------------SSKIKNASCGCYHSLILMSNGRVMVFG 790
Query: 315 WGLYGQ 320
GQ
Sbjct: 791 RNNKGQ 796
>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
guttata]
Length = 991
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 122/304 (40%), Gaps = 65/304 (21%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
++ +L P + +DV GCG + + G + T G +D GQ L K
Sbjct: 18 DEEIVLEPRKSDFFLNKRVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKA 71
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW-----------RECVPSAKVT 140
+ PE ++V + G AH +++ + G+VY WG ECV +V
Sbjct: 72 RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECV---RVP 128
Query: 141 RDFGSAGSFQ--KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
R+ S Q + + G +L + G EV S + + G E+
Sbjct: 129 RNIRSLSEIQIVQVACGYYHSLALSK--------GSEVF-----SWGQNKYGQLGLGYEY 175
Query: 199 F-TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTP 256
SP ++ G+ ++AAGG H+ +L+ G ++GWG GQLGL + VPT
Sbjct: 176 KKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPT- 234
Query: 257 HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
L+ S K V I CG H+A +T G + TFG G
Sbjct: 235 ----LLKSLRSQK---------------------VVHICCGEDHTAALTKEGGVFTFGAG 269
Query: 317 LYGQ 320
YGQ
Sbjct: 270 GYGQ 273
>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 862
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 117/292 (40%), Gaps = 58/292 (19%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
A + G + WG + GQ L G H E P +P V AAG H +V++ G
Sbjct: 70 FAVRQDGTVWAWG-LNVWGQ--LGDGTHTERHTPVQVPGLTGVTAIAAGRRHTFAVSQDG 126
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
V+ WG D+G G + LP E + AG RR T
Sbjct: 127 TVWAWG----------DNDWGQLGDGTRADRHTPVQLP-ELTGVTAIAAG-----RRHTF 170
Query: 184 SAREESENPASGDEFF----------TLSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQ 232
+ R++ A GD + L+P V PG+ +T +AAG HTL + G
Sbjct: 171 AVRQDGTVWAWGDNAWGQLGDGTRTNRLTPVQV---PGLTGVTAIAAGDYHTLAVRQDGT 227
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVRQ-GSVNSSGKA-- 286
VW WG GQLG G+ + + TP +P L ++G+ + VRQ G+V + G
Sbjct: 228 VWAWGNNALGQLGDGTYTERL-TPVQVPGLTGVTAISAGESHTVAVRQDGTVWAWGDNVW 286
Query: 287 ------------------GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G S V IA G RH+ V G + +G +GQ
Sbjct: 287 GQLGDGTRTDRLTPVQVPGLSGVTAIAEGRRHTFAVRQDGTVWAWGLNFWGQ 338
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 112/297 (37%), Gaps = 56/297 (18%)
Query: 31 TSPEKSPILSP------IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQS 84
+S SP++ P + A L GDS +A + G + WG + GQ
Sbjct: 494 SSRSPSPVMVPGLTGVTVFAALAAGDS----------HTVAVMQDGTVWAWG-LNASGQ- 541
Query: 85 YLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
L G + P +P A V AAG AH ++ + G V++WG A G
Sbjct: 542 -LGDGATIDRRIPVQIPGLAGVTAIAAGSAHTLAAGQDGAVWSWG-------ANSYGQLG 593
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS-AREESENPASGDEFFTLSP 203
+ + S + L A + +++ S+ R G L+P
Sbjct: 594 DGTTTHRLSPVQVPGLTGVSAMAAGDAHSVALLQDGTVSAWGRNSWGQLGDGTTAARLTP 653
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
V GV T VAAG HT+ L G VW WGY GQLG G+ + +
Sbjct: 654 VQVHGLTGV--TAVAAGSLHTVALRQDGTVWAWGYNDLGQLGDGTTTRRLA--------- 702
Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P+ V+ G + V IA G H+ V G + +G+ L+GQ
Sbjct: 703 --------PVQVQ----------GLTDVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQ 741
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 110/296 (37%), Gaps = 66/296 (22%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
A + G + WG D L G P +P V AAG H ++V + G
Sbjct: 170 FAVRQDGTVWAWG---DNAWGQLGDGTRTNRLTPVQVPGLTGVTAIAAGDYHTLAVRQDG 226
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP----PSDKRAGEEVVKR 179
V+ WG G G D T + P Q P + AGE
Sbjct: 227 TVWAWG----------NNALGQLG----DGTYTERLTPV-QVPGLTGVTAISAGES---- 267
Query: 180 RKTSSAREESENPASGDEFF----------TLSPCLVTLNPGVK-ITKVAAGGRHTLILS 228
T + R++ A GD + L+P V PG+ +T +A G RHT +
Sbjct: 268 -HTVAVRQDGTVWAWGDNVWGQLGDGTRTDRLTPVQV---PGLSGVTAIAEGRRHTFAVR 323
Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVRQ-GSVNSSG 284
G VW WG GQLG G+R + TP +P L A+G L VRQ G+V + G
Sbjct: 324 QDGTVWAWGLNFWGQLGDGTRSDRL-TPVQVPDLTSVTAIAAGDYHTLAVRQDGTVWAWG 382
Query: 285 KA--------------------GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + V IA G H+ + G + +G ++GQ
Sbjct: 383 DNVWGQLGDGTYTDRLTPVQVPGLTGVTAIAAGESHTVAMRQDGTVWAWGDNVWGQ 438
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 121/327 (37%), Gaps = 62/327 (18%)
Query: 27 YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYL 86
Y +P + P L+ + A + G+S +A + G + WG D L
Sbjct: 394 YTDRLTPVQVPGLTGVTA-IAAGES----------HTVAMRQDGTVWAWG---DNVWGQL 439
Query: 87 TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
G + + P +P SV AAG H ++V + G V WG F +
Sbjct: 440 GDGTYTDRLTPVQVPDLTSVTAIAAGDYHTLAVRQDGTVCAWG-------------FNAY 486
Query: 147 GSFQKDSTGKQSALP---------TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
G D T +S P T A + + V + T A + + GD
Sbjct: 487 GQL-GDGTSSRSPSPVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVWAWGLNASGQLGDG 545
Query: 198 FFTLSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS---RIKMV 253
T+ + PG+ +T +AAG HTL G VW WG GQLG G+ R+ V
Sbjct: 546 A-TIDRRIPVQIPGLAGVTAIAAGSAHTLAAGQDGAVWSWGANSYGQLGDGTTTHRLSPV 604
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA--------------------GRSYVKE 293
P L AA L++ G+V++ G+ G + V
Sbjct: 605 QVPGLTGVSAMAAGDAHSVALLQDGTVSAWGRNSWGQLGDGTTAARLTPVQVHGLTGVTA 664
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQ 320
+A G H+ + G + +G+ GQ
Sbjct: 665 VAAGSLHTVALRQDGTVWAWGYNDLGQ 691
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 85/222 (38%), Gaps = 25/222 (11%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
+A + G + WG D L G + P +P + V A G H +V + G
Sbjct: 270 VAVRQDGTVWAWG---DNVWGQLGDGTRTDRLTPVQVPGLSGVTAIAEGRRHTFAVRQDG 326
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
V+ WG +G G + +P + + + R+
Sbjct: 327 TVWAWG----------LNFWGQLGDGTRSDRLTPVQVPDLTSVTAIAAGDYHTLAVRQDG 376
Query: 184 SAREESENP--ASGDEFFT--LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGY 238
+ +N GD +T L+P V PG+ +T +AAG HT+ + G VW WG
Sbjct: 377 TVWAWGDNVWGQLGDGTYTDRLTPVQV---PGLTGVTAIAAGESHTVAMRQDGTVWAWGD 433
Query: 239 GGEGQLGLGS---RIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
GQLG G+ R+ V P L AA G L VRQ
Sbjct: 434 NVWGQLGDGTYTDRLTPVQVPDLTSVTAIAA-GDYHTLAVRQ 474
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 59/136 (43%), Gaps = 26/136 (19%)
Query: 210 PGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL---EHA 265
PG+ +T AG HT+ + G W WG GQLG G+R + TP +P L
Sbjct: 4 PGLTGVTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTDRL-TPVQVPGLTGVTAV 62
Query: 266 ASGKDRPLLVRQ-GSV-----NSSGKAGR---------------SYVKEIACGGRHSAVV 304
A+G+ VRQ G+V N G+ G + V IA G RH+ V
Sbjct: 63 AAGRHHTFAVRQDGTVWAWGLNVWGQLGDGTHTERHTPVQVPGLTGVTAIAAGRRHTFAV 122
Query: 305 TDAGALLTFGWGLYGQ 320
+ G + +G +GQ
Sbjct: 123 SQDGTVWAWGDNDWGQ 138
>gi|440800955|gb|ELR21981.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 447
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 59/122 (48%), Gaps = 25/122 (20%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GD+ + P V GV+I KVAAG H+L+LSD G V+ +G G +G LG G + + +
Sbjct: 149 GDQRTQMIPRPVLSLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQL- 207
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
P LI L+ R V +IA G HS VV ++G + +FG
Sbjct: 208 VPKLISSLQ------------------------REKVVDIAAGSAHSLVVAESGDVYSFG 243
Query: 315 WG 316
G
Sbjct: 244 LG 245
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 116/310 (37%), Gaps = 76/310 (24%)
Query: 37 PILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--- 93
P+LS R+ G +L S+ G + ++G D S HG+
Sbjct: 159 PVLSLSGVRIVK-------VAAGAHHSLVLSDQGNVFSFGVGID------GSLGHGDQAR 205
Query: 94 --TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
P+ VV AAG AH + V E+G+VY++G GS G+
Sbjct: 206 QLVPKLISSLQREKVVDIAAGSAHSLVVAESGDVYSFG-------------LGSEGALGH 252
Query: 152 DSTGKQSALPTE-----QAPPSDKRAG-EEVVKRRKTSSAREESENPASGDEFF------ 199
T S +P + Q P AG + K +E + G +
Sbjct: 253 GDT-DMSLVPKKIEHFVQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLGLG 311
Query: 200 -----TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
SP V + ++ AG H+L+L++ G+V+ +G GQLG G+ ++ P
Sbjct: 312 HFSRMIASPAQVQVEAAA--VEIEAGAHHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNP 369
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
P LI LE R + ++A G S V++ G + +FG
Sbjct: 370 EPTLIQSLE------------------------RERIVDVAAGNNFSLVLSAEGTVFSFG 405
Query: 315 WGLYGQRMAK 324
G G R+ K
Sbjct: 406 CGKNG-RLGK 414
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 125/301 (41%), Gaps = 68/301 (22%)
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGEVY 126
+G ++++G AD G G H + P + A V +AG H + T+ G +
Sbjct: 77 AGNVVSFGLADPSGH-----GDHVDKLRPKCVEALARERVRDVSAGLYHSLVATKDGGLL 131
Query: 127 TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP-PSDKRAGEEVVKRR---KT 182
++G+ SA V D G G G Q T+ P P +G +VK
Sbjct: 132 SFGY----GSANVVVD-GRLGH------GDQR---TQMIPRPVLSLSGVRIVKVAAGAHH 177
Query: 183 SSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
S + N S GD+ L P L++ K+ +AAG H+L++++ G
Sbjct: 178 SLVLSDQGNVFSFGVGIDGSLGHGDQARQLVPKLISSLQREKVVDIAAGSAHSLVVAESG 237
Query: 232 QVWGWGYGGEGQLGLG-SRIKMVP--TPHLI--PCLEHAASGKDRPLLVR------QGSV 280
V+ +G G EG LG G + + +VP H + P ++ AA G +L + +G V
Sbjct: 238 DVYSFGLGSEGALGHGDTDMSLVPKKIEHFVQRPAVKVAAGGSHSLVLSKLYVLEQEGRV 297
Query: 281 -----NSSGKAGRSYVK----------------EIACGGRHSAVVTDAGALLTFGWGLYG 319
NS G+ G + EI G HS V+T+ G + +FG +G
Sbjct: 298 LSFGQNSYGQLGLGHFSRMIASPAQVQVEAAAVEIEAGAHHSLVLTNDGRVYSFGLAQHG 357
Query: 320 Q 320
Q
Sbjct: 358 Q 358
>gi|443697240|gb|ELT97775.1| hypothetical protein CAPTEDRAFT_180059 [Capitella teleta]
Length = 453
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 97/261 (37%), Gaps = 86/261 (32%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
LAT+ +G++ +WG G L +G + P P P+ + + A G H +++
Sbjct: 89 VLATTNAGEVYSWG---HNGYCQLGNGSTNQGPTPTPVTSSLLGKRITAIACGSHHSMAL 145
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
+ GE++ WG C G GS G S PT R
Sbjct: 146 SSEGEIFAWGQNNC----------GQVGS------GTTSNQPT---------------PR 174
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+ T+ + K +A G ++ D G+V+GWGY
Sbjct: 175 KVTACIGSK------------------------KCISIACGQTSSIAAFDTGEVFGWGYN 210
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G GQLGLG+ I P P + L + ++ +IACG
Sbjct: 211 GNGQLGLGNNINQ-PNPCRLVVLNNV------------------------FITQIACGYA 245
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
H+ +TD G+L +G YGQ
Sbjct: 246 HTLGLTDEGSLYAWGANSYGQ 266
>gi|392347372|ref|XP_342701.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
norvegicus]
Length = 1185
Score = 64.3 bits (155), Expect = 8e-08, Method: Composition-based stats.
Identities = 60/267 (22%), Positives = 97/267 (36%), Gaps = 86/267 (32%)
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ S + + PEP + + + G H V+V G V+TWG
Sbjct: 206 NSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWG--------- 256
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G + + S +PT+
Sbjct: 257 ----AGSEGQLGIGESKEISFMPTK----------------------------------- 277
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
+ G+KI +V+ G H+L LS+ GQV+ WG +GQLGLG+ + +P
Sbjct: 278 -------INSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQK 330
Query: 259 IPCLE-----HAASGKDRPLLV------------RQGSVNSSGKAGRSYVKE-------- 293
+ LE A+G + R G + SG + + + +
Sbjct: 331 VKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALK 390
Query: 294 ------IACGGRHSAVVTDAGALLTFG 314
I+CG H++V+T+ G + TFG
Sbjct: 391 TLNVVYISCGYEHTSVLTEDGQVFTFG 417
Score = 49.3 bits (116), Expect = 0.003, Method: Composition-based stats.
Identities = 76/321 (23%), Positives = 124/321 (38%), Gaps = 88/321 (27%)
Query: 26 GYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSY 85
G L SP+ + PI A D+ G ++A G++ TWG A EGQ
Sbjct: 209 GQLGQKSPQSTKRPEPIQAL---STVHIDLVSCGKEHSVAVCHQGRVFTWG-AGSEGQLG 264
Query: 86 LTSGKHGETPEPFPLPTEAS------VVKAAAGWAHCVSVTEAGEVYTWGWR-------- 131
+ GE+ E +PT+ + +++ + G H ++++E G+V++WG
Sbjct: 265 I-----GESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLG 319
Query: 132 ---------------ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
E +P A+V G SF G + R+G+
Sbjct: 320 NNLCSQASPQKVKSLEGIPLAQVAA--GGTHSFALSLMGTSFGW-------GNNRSGQLA 370
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ +SA+E+ P S L TLN + ++ G HT +L++ GQV+ +
Sbjct: 371 L---SGNSAKEQIYKPHS-------IGALKTLN----VVYISCGYEHTSVLTEDGQVFTF 416
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G QL R SG+ P L+ G G +V +I C
Sbjct: 417 GGSSSEQLQHSPR-----------------SGRGGPQLIE-------GIGG--HVSQIEC 450
Query: 297 GGRHS-AVVTDAGALLTFGWG 316
G H+ A V G +++ G G
Sbjct: 451 GSYHTIAYVYTTGQVVSLGRG 471
>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
vitripennis]
Length = 1083
Score = 64.3 bits (155), Expect = 8e-08, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 28/135 (20%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAAS 267
+ ++A G +HTL L++ G+++ WG +GQLGLG +K+ P L IP A
Sbjct: 166 VVQIACGKKHTLALTNNGELYAWGSNSDGQLGLGQDVKIETRPKLITGLATIPIAFIACG 225
Query: 268 GKDRPLLVRQGSV-----NSSGKAG-----------------RSYVKEIACGGRHSAVVT 305
G ++ + G+V N+ G+ G + VK +ACG S +T
Sbjct: 226 GYHSIVVSKSGAVFGWGRNTFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLT 285
Query: 306 DAGALLTFGWGLYGQ 320
G + T G G+YGQ
Sbjct: 286 MDGGVFTCGAGMYGQ 300
Score = 60.8 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 33/136 (24%)
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA-----ASGKD 270
+ A G H++ +++ GQ++ WG +GQLGLG+ + + TP ++ L + A GK
Sbjct: 115 QAACGASHSVAVNNWGQLFCWGSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKK 174
Query: 271 RPL-LVRQGSV-----NSSGKAGRSY------------------VKEIACGGRHSAVVTD 306
L L G + NS G+ G + IACGG HS VV+
Sbjct: 175 HTLALTNNGELYAWGSNSDGQLGLGQDVKIETRPKLITGLATIPIAFIACGGYHSIVVSK 234
Query: 307 AGALLTFGWG--LYGQ 320
+GA+ FGWG +GQ
Sbjct: 235 SGAV--FGWGRNTFGQ 248
Score = 45.4 bits (106), Expect = 0.037, Method: Composition-based stats.
Identities = 65/265 (24%), Positives = 99/265 (37%), Gaps = 45/265 (16%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G ++A + G+L WGS D T TP + VV+ A G H ++
Sbjct: 119 GASHSVAVNNWGQLFCWGSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLA 178
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA--PPSDKRAG--E 174
+T GE+Y WG + G G Q + L T A P + G
Sbjct: 179 LTNNGELYAWG----------SNSDGQLGLGQDVKIETRPKLITGLATIPIAFIACGGYH 228
Query: 175 EVVKRRKTSS---AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+V + + R D PCL+ K+ VA G ++ L+ G
Sbjct: 229 SIVVSKSGAVFGWGRNTFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDG 288
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
V+ G G GQLG G+ + ++P R ++ GSV V
Sbjct: 289 GVFTCGAGMYGQLGHGAN-----SNEILP----------RQIIELMGSV----------V 323
Query: 292 KEIACGGRHS-AVVTDAGALLTFGW 315
+I+CG RH+ A+V G + + W
Sbjct: 324 TQISCGKRHTLALVPSRGKV--YAW 346
>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Meleagris gallopavo]
Length = 1050
Score = 64.3 bits (155), Expect = 8e-08, Method: Composition-based stats.
Identities = 69/279 (24%), Positives = 113/279 (40%), Gaps = 33/279 (11%)
Query: 46 LCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPT 102
L G + + + CG ++A S+ G++ +WG+ D GQ LT+ + T P
Sbjct: 77 LIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSD-GQLGLTTIEDAVTVPRLIKKLN 135
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
+ ++++ + G HC+++ G+ +TWG + + ++ S S Q+ +P
Sbjct: 136 QQTILQISCGNWHCLALAADGQFFTWG-QNSYGQLGLGKECPSQASPQR--VKSLDGIPL 192
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + + S DE SPC V L K+ ++ G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEE 252
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
HT +L+ G V+ +G G GQLG S V R +L G
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV---------------NPRRVLELMG---- 293
Query: 283 SGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQ 320
S V +IACG H+ A V +G + FG G GQ
Sbjct: 294 ------SEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQ 326
Score = 57.8 bits (138), Expect = 7e-06, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 49/118 (41%), Gaps = 24/118 (20%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L+ G I VA G H++ LSD GQV+ WG G +GQLGL + V P LI
Sbjct: 75 PELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIK-- 132
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
K + + +I+CG H + G T+G YGQ
Sbjct: 133 ----------------------KLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQ 168
Score = 43.9 bits (102), Expect = 0.11, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 27/107 (25%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
+ +VA GG H++ L + G+V+ G +GQLG H + G +P
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG------------------HESEGS-KPE 76
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
L+ G ++ +ACG HS ++D G + ++G G GQ
Sbjct: 77 LI--------GALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQ 115
>gi|427797227|gb|JAA64065.1| Putative alpha-tubulin suppressor, partial [Rhipicephalus
pulchellus]
Length = 606
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 84/213 (39%), Gaps = 35/213 (16%)
Query: 63 ALATSESGKLITWGSADDEGQSYL--TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
LA +ESG+L++WG G L G P V + A G H +++T
Sbjct: 163 VLAVTESGELLSWG---HNGYCQLGNNCNTQGLVPSSISAGLSHRVAQVACGSHHSLALT 219
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD---KRAGEEVV 177
G+VY WG C G GS G + PT + S +R
Sbjct: 220 TNGDVYAWGQNNC----------GQVGS------GSTTNQPTPRKVSSGIGGRRCIGVAC 263
Query: 178 KRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
+ + + E E G+ SPC VT GV I KV G HT+ L
Sbjct: 264 GQTSSMAVMENGEVFGWGYNGNGQLGLGNNVNQTSPCRVTNLQGVVIHKVVCGYAHTMAL 323
Query: 228 SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
SD G ++ WG GQLG G++ V +P +P
Sbjct: 324 SDEGVLYTWGANSYGQLGTGNKANQV-SPFKMP 355
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 60/149 (40%), Gaps = 30/149 (20%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P ++ ++ +VA G H+L L+ G V+ WG GQ+G GS PTP +
Sbjct: 192 LVPSSISAGLSHRVAQVACGSHHSLALTTNGDVYAWGQNNCGQVGSGSTTNQ-PTPRKVS 250
Query: 261 -------CLEHAASGKDRPLLVRQGSV-----NSSGKAGR-----------------SYV 291
C+ A ++ G V N +G+ G +
Sbjct: 251 SGIGGRRCIGVACGQTSSMAVMENGEVFGWGYNGNGQLGLGNNVNQTSPCRVTNLQGVVI 310
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
++ CG H+ ++D G L T+G YGQ
Sbjct: 311 HKVVCGYAHTMALSDEGVLYTWGANSYGQ 339
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WG G S P P ++ G + G CG ++A E+G++ WG
Sbjct: 224 VYAWGQNNCGQVGSGSTTNQPTPRKVSSGIGGRRCIGVACGQTSSMAVMENGEVFGWGY- 282
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
G L G + P + VV K G+AH +++++ G +YTWG
Sbjct: 283 --NGNGQLGLGNNVNQTSPCRVTNLQGVVIHKVVCGYAHTMALSDEGVLYTWG 333
>gi|432930911|ref|XP_004081521.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Oryzias
latipes]
Length = 531
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 95/261 (36%), Gaps = 86/261 (32%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L +E G+L WG G S L +G + P + VV+ A G H +++
Sbjct: 87 VLMATEDGELFAWGH---NGYSQLGNGTTNQGVAPVLVSANMLNKKVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
T++GEVY WG+ C G GS ST Q P+ +R
Sbjct: 144 TDSGEVYAWGYNNC----------GQVGS---GSTANQ---------PTPRR-------- 173
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+S CL + G +L + D G+V+GWGY
Sbjct: 174 ---------------------VSSCL----QNKVAVGIVCGQTSSLAVVDNGEVYGWGYN 208
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G GQLGLG+ L PC L+ QG V +I CG
Sbjct: 209 GNGQLGLGNN-----GNQLTPC----------RLVALQGLC----------VLQIVCGYA 243
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
H ++D G L +G YGQ
Sbjct: 244 HCLALSDEGVLYAWGSNTYGQ 264
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 25/128 (19%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T+ P + G KI ++ G G H L+ ++ G+++ WG+ G QLG G+ +
Sbjct: 56 TGDSQSTIVPKKLDFLNGRKIVSLSYGSGPHVLMATEDGELFAWGHNGYSQLGNGTTNQG 115
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
V P+LV +N V E+ACG HS +TD+G +
Sbjct: 116 VA-----------------PVLVSANMLNKK-------VVEVACGSHHSMALTDSGEVYA 151
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 152 WGYNNCGQ 159
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S P P R+ K G CG +LA ++G++ WG
Sbjct: 149 VYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKVAVGIVCGQTSSLAVVDNGEVYGWG-Y 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L + + TP V++ G+AHC+++++ G +Y WG
Sbjct: 208 NGNGQLGLGNNGNQLTPCRLVALQGLCVLQIVCGYAHCLALSDEGVLYAWG 258
>gi|357147842|ref|XP_003574510.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 389
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 117/315 (37%), Gaps = 46/315 (14%)
Query: 17 CKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKL 72
C + ++ WG+ G PE SP P G GG LA + G+
Sbjct: 57 CDDGRLFTWGWNQRGTLGHPPETKTESSPAPVEALAGVKIVQAAIGGW-HCLAVDDKGRA 115
Query: 73 ITWGS-------ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEV 125
WG + E + T + P P + V + AAG H V +T+ G V
Sbjct: 116 YAWGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCALKLKVQQVAAGGTHSVVLTQEGHV 175
Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA 185
+TWG + P + + S G + + + E+ V +
Sbjct: 176 WTWG--QPWPPGDIKQI-----STPVRVQGLEKVMMIAVGAFHNLALSEDAVL---WAWG 225
Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
E GD P V G+ + +AAGG H+ L+ G+V+ WG G G+LG
Sbjct: 226 NNEYGQLGIGDTQPRSQPIRVEGLSGLSLVDIAAGGWHSTALTKDGEVYAWGRGEHGRLG 285
Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
G + H++P G+D + +++CGG HS +T
Sbjct: 286 FGDD----KSSHMVPLKVQLLDGED--------------------IVQVSCGGTHSVALT 321
Query: 306 DAGALLTFGWGLYGQ 320
G + ++G G +G+
Sbjct: 322 SDGRIFSYGRGDHGR 336
>gi|293346825|ref|XP_001064216.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
norvegicus]
Length = 1149
Score = 64.3 bits (155), Expect = 8e-08, Method: Composition-based stats.
Identities = 60/267 (22%), Positives = 97/267 (36%), Gaps = 86/267 (32%)
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ S + + PEP + + + G H V+V G V+TWG
Sbjct: 206 NSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWG--------- 256
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G + + S +PT+
Sbjct: 257 ----AGSEGQLGIGESKEISFMPTK----------------------------------- 277
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
+ G+KI +V+ G H+L LS+ GQV+ WG +GQLGLG+ + +P
Sbjct: 278 -------INSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQK 330
Query: 259 IPCLE-----HAASGKDRPLLV------------RQGSVNSSGKAGRSYVKE-------- 293
+ LE A+G + R G + SG + + + +
Sbjct: 331 VKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALK 390
Query: 294 ------IACGGRHSAVVTDAGALLTFG 314
I+CG H++V+T+ G + TFG
Sbjct: 391 TLNVVYISCGYEHTSVLTEDGQVFTFG 417
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 76/321 (23%), Positives = 124/321 (38%), Gaps = 88/321 (27%)
Query: 26 GYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSY 85
G L SP+ + PI A D+ G ++A G++ TWG A EGQ
Sbjct: 209 GQLGQKSPQSTKRPEPIQAL---STVHIDLVSCGKEHSVAVCHQGRVFTWG-AGSEGQLG 264
Query: 86 LTSGKHGETPEPFPLPTEAS------VVKAAAGWAHCVSVTEAGEVYTWGWR-------- 131
+ GE+ E +PT+ + +++ + G H ++++E G+V++WG
Sbjct: 265 I-----GESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLG 319
Query: 132 ---------------ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
E +P A+V G SF G + R+G+
Sbjct: 320 NNLCSQASPQKVKSLEGIPLAQVAA--GGTHSFALSLMGTSFGW-------GNNRSGQLA 370
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ +SA+E+ P S L TLN + ++ G HT +L++ GQV+ +
Sbjct: 371 L---SGNSAKEQIYKPHS-------IGALKTLN----VVYISCGYEHTSVLTEDGQVFTF 416
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G QL R SG+ P L+ G G +V +I C
Sbjct: 417 GGSSSEQLQHSPR-----------------SGRGGPQLIE-------GIGG--HVSQIEC 450
Query: 297 GGRHS-AVVTDAGALLTFGWG 316
G H+ A V G +++ G G
Sbjct: 451 GSYHTIAYVYTTGQVVSLGRG 471
Score = 43.1 bits (100), Expect = 0.19, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 28/111 (25%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--RIKMVPTPHLIPCLEHAASGK 269
V I V+ G H++ + G+V+ WG G EGQLG+G I +PT
Sbjct: 231 VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPT-------------- 276
Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+NS AG + +++CG HS +++ G + ++G GQ
Sbjct: 277 ---------KINS--LAGIKII-QVSCGHYHSLALSEDGQVFSWGSNRQGQ 315
>gi|237830541|ref|XP_002364568.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|211962232|gb|EEA97427.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
Length = 862
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 63/139 (45%), Gaps = 31/139 (22%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P +++ V++ +V G +H L LSD G+V+ +G G GQLGLG ++V P +
Sbjct: 155 LQPVVISALANVRVVEVCVGEQHALFLSDAGEVFAYGQGIYGQLGLGYERQVVHLPQKV- 213
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G R V++IACG HS VT GA+ F WG
Sbjct: 214 ----------------------EGALSRFPVRQIACGDYHSVAVTREGAV--FAWG---- 245
Query: 321 RMAKCLAGDGINMGSWVWV 339
A C+ GDG + + V
Sbjct: 246 -AADCV-GDGSGLCRFAPV 262
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 87/224 (38%), Gaps = 49/224 (21%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ- 164
V + A G H V+VT G V+ WG +CV D +G P
Sbjct: 222 VRQIACGDYHSVAVTREGAVFAWGAADCV----------------GDGSGLCRFAPVRLS 265
Query: 165 --APPSDKRAGEEVVKRRKTSSAREESENPAS-GDEFF-----TLSPCLVTLNPGVKITK 216
A P D A + R + ++A ES G+ FF T V P + +
Sbjct: 266 LGASPGD--ACRVIAARFQQTAAVSESGRLLVWGETFFADFHATPEVLCVFFRP---VVQ 320
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
VA G L+L+D GQV+GWG G G+L M P P + +SG+ P +V
Sbjct: 321 VAIGKHFGLVLTDDGQVYGWGDGTYGELTTAG--PMAPKTLPEPLILKDSSGQSLPPVV- 377
Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
EIA G RH+ ++T L G L GQ
Sbjct: 378 ----------------EIATGTRHAILLTHDMRLWALGDNLAGQ 405
>gi|442318560|ref|YP_007358581.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486202|gb|AGC42897.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 866
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 134/343 (39%), Gaps = 53/343 (15%)
Query: 10 ENEKMEECKETVVYMWGYLP------GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFA 63
E +K+ + ++ WG+ GT+ +++ SP + G GG +
Sbjct: 459 ERKKVNMAQVHTLFAWGHNTNGELGDGTTTQRT---SPTAVVVSG----IVKTAGGSAHS 511
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
+A G + TWG + GQ L +G + P LP + V+ AAG H V+++ G
Sbjct: 512 VALGAGGAVWTWGY-NAYGQ--LGNGTTTQVVTPTQLPGMSGVIDVAAGVNHTVALSADG 568
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
V WG+ +G G+ + ++P + V +
Sbjct: 569 TVAAWGYNA----------YGQLGNGTTANQLTPQSVPELDGVTAISAGSTHTVALKADG 618
Query: 184 SAREESENPAS--GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
+ N GD FT V + + +AAG HT+ + G +W WGYG +
Sbjct: 619 TVWAWGSNLYGQLGDGTFTHRSSPVQVPSLENVVSIAAGHFHTVAVKGDGTLWVWGYGPQ 678
Query: 242 GQLGLGSRIKMVPTPHLIPCLEH----AASGKDRPLLVRQGSV-----NSSGKAGRSYVK 292
GQLGLG+ P + L H AA G L+ G V NSSG+ G + +
Sbjct: 679 GQLGLGTTTNQ-SVPVQVSGLGHAVAIAAGGYHTVALLANGQVWTWGYNSSGQLGDATII 737
Query: 293 E---------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +A GG +AV+ G + FG+ GQ
Sbjct: 738 QRYSPVLVPGLTNVIALAAGGYTTAVLKRDGTVWAFGYNPNGQ 780
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 86/210 (40%), Gaps = 24/210 (11%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G L G L WG+ + GQ L +G+ + P + VV A+AG H V+
Sbjct: 153 GVYHTLEVKSGGSLWAWGN-NPSGQ--LGNGQRTQRNAPTRVRGLNQVVSASAGAEHSVA 209
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD----KRAGE 174
VTE G V+TWG + +G G D T A+P + SD AG
Sbjct: 210 VTEDGSVWTWG----------SNAYGQLG----DGTNTLRAVPVQVPGMSDVVAVAAAGS 255
Query: 175 EVVKRRKTSSAREESENPAS--GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
V + + N + GD T S + + +T +AAG HTL + G
Sbjct: 256 RTVALKADGTVWTWGINSSGELGDGTTTHSLLPIQVPNLSGVTNIAAGLWHTLAVKKDGS 315
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
W WG GQLG G+ + + P L+ L
Sbjct: 316 AWSWGNNAYGQLGDGTTLNRL-RPVLVAGL 344
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +A G + WGS + GQ L G P +P+ +VV AAG H V+
Sbjct: 607 GSTHTVALKADGTVWAWGS-NLYGQ--LGDGTFTHRSSPVQVPSLENVVSIAAGHFHTVA 663
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA----GE 174
V G ++ WG +G G +T QS +P + + A G
Sbjct: 664 VKGDGTLWVWG-------------YGPQGQLGLGTTTNQS-VPVQVSGLGHAVAIAAGGY 709
Query: 175 EVVKRRKTSSAREESENPAS--GDEFFT--LSPCLVTLNPGV-KITKVAAGGRHTLILSD 229
V N + GD SP LV PG+ + +AAGG T +L
Sbjct: 710 HTVALLANGQVWTWGYNSSGQLGDATIIQRYSPVLV---PGLTNVIALAAGGYTTAVLKR 766
Query: 230 MGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDRPLLVRQGS------VNS 282
G VW +GY GQLG G+ + PT L+ + +SG + + +R+ + NS
Sbjct: 767 DGTVWAFGYNPNGQLGDGTTTSRSSPTATLMNSVVDLSSGVNHMMGLRKDAWVRACGYNS 826
Query: 283 SGKAG 287
+G+ G
Sbjct: 827 AGQLG 831
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 116/300 (38%), Gaps = 58/300 (19%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A G WG + GQ L +G + P + V+ AG H +
Sbjct: 352 GGVVHTVALKWDGTAWGWGY-NSAGQ--LGNGTTTNSSIPVQVAALTQAVEIDAGGYHTL 408
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR---AGE 174
+ + G +Y WG +G+ G+ S S++P Q P S R AG
Sbjct: 409 ARRQDGTLYAWG----------DNFYGALGTGNTTS----SSVPV-QVPLSGVRWFGAGY 453
Query: 175 --EVVKRRKTSSAREES-------ENPASGDEFFT--LSPCLVTLNPGVKITKVAAGGRH 223
V +R+K + A+ + N GD T SP V ++ I K A G H
Sbjct: 454 YYSVAERKKVNMAQVHTLFAWGHNTNGELGDGTTTQRTSPTAVVVS---GIVKTAGGSAH 510
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT---PHLIPCLEHAASGKDRPLLVRQGSV 280
++ L G VW WGY GQLG G+ ++V P + ++ AA L G+V
Sbjct: 511 SVALGAGGAVWTWGYNAYGQLGNGTTTQVVTPTQLPGMSGVIDVAAGVNHTVALSADGTV 570
Query: 281 -----NSSGKAGRSY---------------VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
N+ G+ G V I+ G H+ + G + +G LYGQ
Sbjct: 571 AAWGYNAYGQLGNGTTANQLTPQSVPELDGVTAISAGSTHTVALKADGTVWAWGSNLYGQ 630
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 47/117 (40%), Gaps = 33/117 (28%)
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
V+ G HTL + G +W WG GQLG G R + ++ P V
Sbjct: 149 SVSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQ-----------------RNAPTRV 191
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
R G + V + G HS VT+ G++ T+G YGQ GDG N
Sbjct: 192 R----------GLNQVVSASAGAEHSVAVTEDGSVWTWGSNAYGQL------GDGTN 232
>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
Length = 546
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 119/317 (37%), Gaps = 91/317 (28%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
++ +L P + +DV GCG + + G + T G +D GQ L K
Sbjct: 18 DEEIVLEPRKSDFFVNKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
+ PE ++V + G AH +++ + G+VY WG
Sbjct: 72 RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL--------------------- 110
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
DS G+ + EE ++ + + +
Sbjct: 111 DSDGQLGL-----------QGSEECIRVPRNIKSLSD----------------------- 136
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG + +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VTDAGALLTFGWGLYGQ 320
+T G + TFG G YGQ
Sbjct: 257 LTKEGGVFTFGAGGYGQ 273
>gi|118777951|ref|XP_308369.3| AGAP007506-PA [Anopheles gambiae str. PEST]
gi|116132148|gb|EAA04658.3| AGAP007506-PA [Anopheles gambiae str. PEST]
Length = 455
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 116/314 (36%), Gaps = 66/314 (21%)
Query: 33 PEKSPI---LSPIPARLCGGDSWKD----VCGGGCGFALATSESGKLITWGSAD--DEGQ 83
P K P+ + P P L + + G LA +E G ++ WG+ G+
Sbjct: 139 PHKKPLELTIYPAPIDLSSAKTEQRNRVVQVSAGRAHVLALTEDGSVLAWGNNAYGQCGR 198
Query: 84 SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDF 143
+T + P + E V G H + +T+AG VY+ GW D
Sbjct: 199 KIVTEEDYFRNPVVNTIRLEEPVQAIECGQDHSLMLTKAGRVYSCGW----------SDD 248
Query: 144 GSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF----- 198
G AG G+ + T P GE VVK +SS GD F
Sbjct: 249 GQAGQ------GRYGLIDTP-GPAEGDMKGERVVK--VSSSCDTILAINDKGDLFGWGNS 299
Query: 199 -FTLSPCLVTLNPGV-------------KITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
+ + NP + KI +AA G + L L++ G V+ WGY G L
Sbjct: 300 EYGQLGDVAQDNPQINIPRYLPFAKECGKIVDIAAAGSYCLALNEHGDVFSWGY---GIL 356
Query: 245 GLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
G G ++ PTP IP P L + + + K V IACG HSA +
Sbjct: 357 GFGPEVQHRPTPTRIP-----------PALFGRNEFSPNAK-----VISIACGITHSAAI 400
Query: 305 TDAGALLTFGWGLY 318
D L +G Y
Sbjct: 401 NDQHDLYMWGHNRY 414
Score = 37.7 bits (86), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 15/110 (13%)
Query: 214 ITKVAAGGRHTLIL---SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
+ VAAG T+ + SD +VWG G +GQLG ++ P PH P +
Sbjct: 98 VADVAAGYGFTVYVVEKSDGPEVWGTGINTDGQLG----VQKAPGPHKKPL--------E 145
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ ++S+ R+ V +++ G H +T+ G++L +G YGQ
Sbjct: 146 LTIYPAPIDLSSAKTEQRNRVVQVSAGRAHVLALTEDGSVLAWGNNAYGQ 195
>gi|145593727|ref|YP_001158024.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303064|gb|ABP53646.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 567
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 106/283 (37%), Gaps = 84/283 (29%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
+T+ S L+ WG +D GQ S P LP +V AAG H +++T AG
Sbjct: 50 STAVSEFLLAWGK-NDNGQLGNGSTTGSNVPIAVSLPLGTTVTAVAAGRFHSLALTSAGT 108
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
V WG T FG G D T ++ R
Sbjct: 109 VLAWG----------TNHFGQLG----DGT---------------------LIDRS---- 129
Query: 185 AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
+P V+L PG +T VAAGG H++ L+ +G V WG G GQL
Sbjct: 130 -----------------APVEVSLPPGTTVTAVAAGGVHSMALTSVGTVLAWGGNGVGQL 172
Query: 245 GLGSRI-KMVPTPHLIP---CLEHAASGKDRPLLVRQG------SVNSSGKAG------R 288
G GS + P ++P + A+ + L V +N +G+ G R
Sbjct: 173 GDGSTTRRTTPVEAILPSGVTVTAVAAAESHSLAVTSAGAALAWGLNGTGQLGDGSTINR 232
Query: 289 SY-----------VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
S V IA G HS VT GA L +G+ GQ
Sbjct: 233 STPVSVALPLGTEVTAIAAGRLHSLAVTSVGAALAWGYNGTGQ 275
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 87/215 (40%), Gaps = 14/215 (6%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
PI L G + V G +LA + +G ++ WG+ + GQ + P L
Sbjct: 79 PIAVSLPLGTTVTAVAAGRF-HSLALTSAGTVLAWGT-NHFGQLGDGTLIDRSAPVEVSL 136
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
P +V AAG H +++T G V WG G GS + +T ++ L
Sbjct: 137 PPGTTVTAVAAGGVHSMALTSVGTVLAWGGNGV-------GQLGD-GSTTRRTTPVEAIL 188
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPA----SGDEFFTLSPCLVTLNPGVKITK 216
P+ + A + +A N G +P V L G ++T
Sbjct: 189 PSGVTVTAVAAAESHSLAVTSAGAALAWGLNGTGQLGDGSTINRSTPVSVALPLGTEVTA 248
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
+AAG H+L ++ +G WGY G GQLG G+ I
Sbjct: 249 IAAGRLHSLAVTSVGAALAWGYNGTGQLGDGTTIN 283
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 78/205 (38%), Gaps = 14/205 (6%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P+ L G + V GG ++A + G ++ WG + GQ S TP
Sbjct: 130 APVEVSLPPGTTVTAVAAGGV-HSMALTSVGTVLAWG-GNGVGQLGDGSTTRRTTPVEAI 187
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
LP+ +V AA +H ++VT AG WG T G GS ST A
Sbjct: 188 LPSGVTVTAVAAAESHSLAVTSAGAALAWGLNG-------TGQLGD-GSTINRSTPVSVA 239
Query: 160 LP--TEQAPPSDKRAGEEVVKRRKTSSA--REESENPASGDEFFTLSPCLVTLNPGVKIT 215
LP TE + R V + A + G +P V L G ++T
Sbjct: 240 LPLGTEVTAIAAGRLHSLAVTSVGAALAWGYNGTGQLGDGTTINRSTPVSVALPLGAEVT 299
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGG 240
V AG H+ L+ G WG G
Sbjct: 300 AVVAGRLHSAALTTAGTALAWGDNG 324
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 88/249 (35%), Gaps = 31/249 (12%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P+ A L G + V +LA + +G + WG + GQ S + TP
Sbjct: 182 TPVEAILPSGVTVTAVAAAES-HSLAVTSAGAALAWG-LNGTGQLGDGSTINRSTPVSVA 239
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
LP V AAG H ++VT G WG+ T G D T +
Sbjct: 240 LPLGTEVTAIAAGRLHSLAVTSVGAALAWGYNG-------TGQLG-------DGTTINRS 285
Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCL----------VTLN 209
P A P V R +++ A GD F V+L
Sbjct: 286 TPVSVALPLGAEVTAVVAGRLHSAALTTAGTALAWGDNGFGQLGNGGGSNSSEAVEVSLP 345
Query: 210 PGVKITKVAA-GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-MVPTPHLIP---CLEH 264
G + +A+ HT+ ++ G WG GQLG G+ P P +P L
Sbjct: 346 TGTTLAAIASRDSDHTIAIAGDGTALAWGSNIFGQLGDGTTTNPSTPVPVALPTGITLLT 405
Query: 265 AASGKDRPL 273
A+G D L
Sbjct: 406 TAAGSDHTL 414
>gi|37695550|gb|AAR00320.1| HECT E3 ubiquitin ligase [Homo sapiens]
Length = 1024
Score = 64.3 bits (155), Expect = 9e-08, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 62/136 (45%), Gaps = 28/136 (20%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAA 266
KI ++ G H+L LS G+++ WG GQLG+G + TP + +P + +A
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISA 198
Query: 267 SGKDRPLLVRQGSVNSSGK-------AGRSYVKE---------------IACGGRHSAVV 304
L G++ S GK G + K+ +ACGG HSA++
Sbjct: 199 GEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALL 258
Query: 305 TDAGALLTFGWGLYGQ 320
T G L TFG G +GQ
Sbjct: 259 TQDGLLFTFGAGKHGQ 274
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 48/221 (21%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKH---GETPEPFPLPTEASVVKAAAGWA 114
CG +LA S+ G+L WG + GQ L G+ TP+ + + +AG A
Sbjct: 145 CGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRKFPSTTTPQIVEHLAGVPLAQISAGEA 201
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST-----------------GKQ 157
H +++ +G +Y+WG EC G + KD G
Sbjct: 202 HSTALSMSGNIYSWGKNEC-------GQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSH 254
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKV 217
SAL T+ AG K + ++E L PCLV G ++T++
Sbjct: 255 SALLTQDGLLFTFGAG----KHGQLGHNSTQNE----------LRPCLVAELVGYRVTQI 300
Query: 218 AAGGRHTLI-LSDMGQVWGWGYGGEGQLGL-GSRIKMVPTP 256
A G HTL +SD+G+V+ +G G +GQLG G+R +++P P
Sbjct: 301 ACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLP 341
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 54/219 (24%), Positives = 85/219 (38%), Gaps = 29/219 (13%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
E +++ G H +++++ GE++ WG + V R F S + Q + +P
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWG-QNLHGQLGVGRKFPSTTTPQ--IVEHLAGVPL 193
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + + S + E G P L+ K+ VA GG
Sbjct: 194 AQISAGEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGS 253
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
H+ +L+ G ++ +G G GQLG S L PCL G
Sbjct: 254 HSALLTQDGLLFTFGAGKHGQLGHNS-----TQNELRPCLVAELVG-------------- 294
Query: 283 SGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQ 320
V +IACG H+ A V+D G + +FG G GQ
Sbjct: 295 ------YRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQ 327
>gi|332233500|ref|XP_003265940.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Nomascus leucogenys]
Length = 1024
Score = 64.3 bits (155), Expect = 9e-08, Method: Composition-based stats.
Identities = 42/121 (34%), Positives = 58/121 (47%), Gaps = 25/121 (20%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T +P +V GV + +++AG H++ LS G ++ WG GQLGLG
Sbjct: 179 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLG------------ 226
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
H S KD P L+ V+ +ACGG HSA++T G L TFG G +G
Sbjct: 227 ----HTES-KDYPSLIE--------ALDNQEVEFLACGGSHSALLTQDGLLFTFGAGKHG 273
Query: 320 Q 320
Q
Sbjct: 274 Q 274
Score = 62.0 bits (149), Expect = 4e-07, Method: Composition-based stats.
Identities = 63/224 (28%), Positives = 98/224 (43%), Gaps = 54/224 (24%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKH---GETPEPFPLPTEASVVKAAAGWA 114
CG +LA S+ G+L WG + GQ L G+ TP+ + + +AG A
Sbjct: 145 CGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRKFPSTTTPQIVEHLAGVPLAQISAGEA 201
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST-------------------- 154
H ++++ +G +Y+WG E FG G +S
Sbjct: 202 HSMALSMSGNIYSWGKNE----------FGQLGLGHTESKDYPSLIEALDNQEVEFLACG 251
Query: 155 GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
G SAL T+ AG K + ++E L PCLV G ++
Sbjct: 252 GSHSALLTQDGLLFTFGAG----KHGQLGHNSTQNE----------LRPCLVAELVGNRV 297
Query: 215 TKVAAGGRHTLI-LSDMGQVWGWGYGGEGQLGL-GSRIKMVPTP 256
T++A G HTL +SD+G+V+ +G G +GQLG G+R +++P P
Sbjct: 298 TQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLIPLP 341
>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
(Silurana) tropicalis]
Length = 1029
Score = 64.3 bits (155), Expect = 9e-08, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 30/138 (21%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAA 266
KI +++ G H+L LS+ G+V+ WG GQLGLGS+I TP L IP ++ A
Sbjct: 138 KIIQISCGNFHSLALSEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTA 197
Query: 267 SGKDRPLLVRQGSV-----NSSGKAGRSY-------------------VKEIACGGRHSA 302
G L G+V N++G+ G V I+CG H+A
Sbjct: 198 GGSQSFALSMSGTVFAWGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLGVAYISCGEEHTA 257
Query: 303 VVTDAGALLTFGWGLYGQ 320
V++ G++ TFG +GQ
Sbjct: 258 VLSKDGSVYTFGDDTHGQ 275
Score = 45.8 bits (107), Expect = 0.030, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 24/107 (22%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
I ++ G H++ +SD G ++ WG G EGQLG G+ TP I
Sbjct: 86 IVDISCGTNHSVAVSDEGSIYSWGDGSEGQLGTGNLSSRNFTPKKI-------------- 131
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G N+ + +I+CG HS +++ G + ++G GQ
Sbjct: 132 ---TGLFNTK-------IIQISCGNFHSLALSEDGRVFSWGQNKCGQ 168
>gi|444911351|ref|ZP_21231526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444718109|gb|ELW58925.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 1085
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 118/287 (41%), Gaps = 38/287 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G G++LA G + WG G L G P P + VV AAG +H ++
Sbjct: 595 GNGYSLAVDAQGSVWAWGY---NGMGQLGDGTTTPRVTPTQAPALSGVVALAAGDSHSLA 651
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+ G + WG + G A + ++ + L A + A V+
Sbjct: 652 LRADGVAWAWGGND-------QGQLGDATTLERSTPAAVPGLAHVVALAAGN-AHSLVLH 703
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK-VAAGGRHTLILSDMGQVWGWG 237
TSS+ + GD TL P V + PG K VAAGG H+L + G VW WG
Sbjct: 704 ADGTSSSWGNNAYGQLGDGTSTLHPVPVQV-PGPSAMKGVAAGGSHSLAVRSDGTVWAWG 762
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVR-QGSV-----NSSGK--- 285
G G+LG G+ ++ P P + L A ++G + L V+ G+V NS G+
Sbjct: 763 NNGSGELGDGTGLQR-PRPVQVQGLGSAVAVSAGTNHSLAVQSDGTVWAWGGNSQGQLGD 821
Query: 286 ------------AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+G + V ++ G HS + G + +G+ YGQ
Sbjct: 822 GTGITRYVPVRVSGLNGVMAVSAGSAHSLALRSDGTVWAWGYNFYGQ 868
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 131/338 (38%), Gaps = 68/338 (20%)
Query: 18 KETVVYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLIT 74
+ V+ WG G + + I +P R+ DS V G+ +LA G +
Sbjct: 54 SDGTVWAWGDNTYGQLGDGTGITQRLPVRVQSLDS---VVALAVGYQHSLALRSDGTVWA 110
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
WG D L G ++ P + + VV AAG H +++ G V+ WG
Sbjct: 111 WG---DNFFGQLGDGSDAQSQVPIQVWSLNGVVAIAAGDHHSLALLSDGSVWAWG----- 162
Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP-- 192
+ + G D+T S LP + +G + T S S+
Sbjct: 163 --------YNAHGQLGDDTT-VASPLPVQ----VQGLSGVVALSAGSTHSLAVLSDGKVK 209
Query: 193 ASGDEFF----------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
A GD ++ +P LV+ GVK V AG H+L L G V WG G G
Sbjct: 210 AWGDNYYGQLGDGSSTERWTPVLVSSLTGVK--SVVAGTFHSLALCSDGTVRAWGENGSG 267
Query: 243 QLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVR-QGSV-----NSSGKAGRSYV-- 291
QLG+ S + P P ++P L + A+G L +R G+V N G+ G +
Sbjct: 268 QLGISSTTRR-PVPVVVPGLTNVQALAAGSAHSLALRSDGTVRAWGNNDHGQVGNGTISQ 326
Query: 292 -------------KEIACGGRHSAVVTDAGALLTFGWG 316
K IA GG HS + G +T+ WG
Sbjct: 327 QLTPVQVPGVGRMKSIAAGGAHSLAMRADG--ITWAWG 362
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 131/368 (35%), Gaps = 86/368 (23%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
+ + L P+P ++ G + K V GG +LA G + WG + G L G +
Sbjct: 721 DGTSTLHPVPVQVPGPSAMKGVAAGGS-HSLAVRSDGTVWAWG---NNGSGELGDGTGLQ 776
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW------------GWRECVP------ 135
P P + S V +AG H ++V G V+ W G VP
Sbjct: 777 RPRPVQVQGLGSAVAVSAGTNHSLAVQSDGTVWAWGGNSQGQLGDGTGITRYVPVRVSGL 836
Query: 136 SAKVTRDFGSAGSFQKDSTGKQ------------SALPTEQAPPSDKRAGEEVVK----R 179
+ + GSA S S G A T++ P VV
Sbjct: 837 NGVMAVSAGSAHSLALRSDGTVWAWGYNFYGQLGDATSTQRLVPIQVPGLTGVVSIAAGT 896
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK--------------VAAGGRHTL 225
+ + R + A G F+ L G KI + VAAG H+L
Sbjct: 897 HHSLAVRSDGTVWAWGYNFYG------QLGDGTKIQRSPPVQVPGLAGMVSVAAGTYHSL 950
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDRPLLVRQ------- 277
+ G VW WGY GQLG G+ +++P P AA+ L+VR
Sbjct: 951 AVHSNGTVWAWGYNNHGQLGDGTTTQRLLPVPISSSSGVIAAAANWHSLVVRTDGTVWGW 1010
Query: 278 GSVNSSGKAGRSY--------------VKEIACGGRHSAVVTDAGALLTFGWGLYGQRMA 323
GS N+S S V+ I+ G HS + G + +G+G GQ
Sbjct: 1011 GSNNASQLGDGSTSDRKMPTPSSVPNGVRSISSGANHSLALRSDGTVWAWGFGNSGQL-- 1068
Query: 324 KCLAGDGI 331
GDG+
Sbjct: 1069 ----GDGV 1072
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 109/293 (37%), Gaps = 56/293 (19%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
+LA G + WG D L G + P +P A V ++ H ++V+
Sbjct: 448 HSLAARADGTVWAWG---DNAFGQLGDGTTTQRLLPVQVPGLAGVDTVSSMHQHSLAVSR 504
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG-------E 174
G V+ WG F +G +T S L Q P
Sbjct: 505 DGTVWAWG-------------FNGSGRLGDGTT--LSRLTPVQVPGLSSMVAVAAGSTHS 549
Query: 175 EVVKRRKTSSAREESENPASGD--EFFTLSPCLVTLNPGVK-ITKVAAGGRHTLILSDMG 231
++ T A ++ N A GD LSP V PG+ + +AAG ++L + G
Sbjct: 550 LALRADGTVWAWGDNSNGALGDGTTLRRLSPVQV---PGLSGVVALAAGNGYSLAVDAQG 606
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVRQGSV------NS 282
VW WGY G GQLG G+ V TP P L A+G L +R V N
Sbjct: 607 SVWAWGYNGMGQLGDGTTTPRV-TPTQAPALSGVVALAAGDSHSLALRADGVAWAWGGND 665
Query: 283 SGKAGR---------------SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G+ G ++V +A G HS V+ G ++G YGQ
Sbjct: 666 QGQLGDATTLERSTPAAVPGLAHVVALAAGNAHSLVLHADGTSSSWGNNAYGQ 718
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 98/246 (39%), Gaps = 29/246 (11%)
Query: 18 KETVVYMWGY-LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWG 76
+ V+ WGY G + + +P ++ G + G +LA G + WG
Sbjct: 854 SDGTVWAWGYNFYGQLGDATSTQRLVPIQVPGLTGVVSIAAG-THHSLAVRSDGTVWAWG 912
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
+ GQ L G + P +P A +V AAG H ++V G V+ WG+
Sbjct: 913 Y-NFYGQ--LGDGTKIQRSPPVQVPGLAGMVSVAAGTYHSLAVHSNGTVWAWGY------ 963
Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG----EEVVKRRKTSSAREESENP 192
+ G G D T Q LP + S A +V R + S N
Sbjct: 964 ----NNHGQLG----DGTTTQRLLPVPISSSSGVIAAAANWHSLVVRTDGTVWGWGSNNA 1015
Query: 193 A---SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-S 248
+ G P ++ GV+ +++G H+L L G VW WG+G GQLG G
Sbjct: 1016 SQLGDGSTSDRKMPTPSSVPNGVR--SISSGANHSLALRSDGTVWAWGFGNSGQLGDGVM 1073
Query: 249 RIKMVP 254
+++VP
Sbjct: 1074 SMRLVP 1079
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 102/260 (39%), Gaps = 32/260 (12%)
Query: 10 ENEKMEECKETVVYMWGY-LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSE 68
++ + + V+ WGY G + + + SP+P ++ G S G +LA
Sbjct: 146 DHHSLALLSDGSVWAWGYNAHGQLGDDTTVASPLPVQVQG-LSGVVALSAGSTHSLAVLS 204
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
GK+ WG D L G E P + + V AG H +++ G V W
Sbjct: 205 DGKVKAWG---DNYYGQLGDGSSTERWTPVLVSSLTGVKSVVAGTFHSLALCSDGTVRAW 261
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
G + G + + ++ L QA + A ++ T A
Sbjct: 262 G-------ENGSGQLGISSTTRRPVPVVVPGLTNVQALAAGS-AHSLALRSDGTVRAWGN 313
Query: 189 SENPASGDEFFT--LSPCLVTLNPGV-KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
+++ G+ + L+P V PGV ++ +AAGG H+L + G W WG +GQLG
Sbjct: 314 NDHGQVGNGTISQQLTPVQV---PGVGRMKSIAAGGAHSLAMRADGITWAWGDDSQGQLG 370
Query: 246 -------------LGSRIKM 252
LG RI+M
Sbjct: 371 DGQSSQQLRPARVLGQRIRM 390
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 84/235 (35%), Gaps = 61/235 (25%)
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
P PL E + AAG AH + + G V+ WG +G G D TG
Sbjct: 34 PPPLGHE----QVAAGAAHSLMLRSDGTVWAWG----------DNTYGQLG----DGTGI 75
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF----------TLSPCLV 206
LP A V + + + R + A GD FF + P V
Sbjct: 76 TQRLPVRVQSLDSVVA--LAVGYQHSLALRSDGTVWAWGDNFFGQLGDGSDAQSQVPIQV 133
Query: 207 -TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
+LN + +AAG H+L L G VW WGY GQLG + +
Sbjct: 134 WSLN---GVVAIAAGDHHSLALLSDGSVWAWGYNAHGQLGDDTTVA-------------- 176
Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
PL V+ G S V ++ G HS V G + +G YGQ
Sbjct: 177 -----SPLPVQ--------VQGLSGVVALSAGSTHSLAVLSDGKVKAWGDNYYGQ 218
>gi|403263471|ref|XP_003924055.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Saimiri boliviensis
boliviensis]
Length = 1024
Score = 63.9 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 101/224 (45%), Gaps = 54/224 (24%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKH---GETPEPFPLPTEASVVKAAAGWA 114
CG +LA S+ G+L WG + GQ L G+ TP+ + + + +AG A
Sbjct: 145 CGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRKFPSTTTPQIVEHLSGIPLAQISAGEA 201
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDST----------------- 154
H ++++ +G +Y+WG E FG G + KDS
Sbjct: 202 HSMALSMSGNIYSWGKNE----------FGQLGLDHTESKDSPSLIEALDNQKVEFLACG 251
Query: 155 GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
G +AL T+ AG K + ++E L PCLV G ++
Sbjct: 252 GSHTALLTQDGLLFTFGAG----KHGQLGHNSTQNE----------LRPCLVAELAGNRV 297
Query: 215 TKVAAGGRHTLI-LSDMGQVWGWGYGGEGQLGL-GSRIKMVPTP 256
T++A G HTL +SD+G+V+ +G G EGQLG G+R +++P P
Sbjct: 298 TQIACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIPLP 341
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/136 (30%), Positives = 60/136 (44%), Gaps = 28/136 (20%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAA 266
KI ++ G H+L LS G+++ WG GQLG+G + TP + IP + +A
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIPLAQISA 198
Query: 267 SGKDRPLLVRQGSVNSSGK----------------------AGRSYVKEIACGGRHSAVV 304
L G++ S GK V+ +ACGG H+A++
Sbjct: 199 GEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALL 258
Query: 305 TDAGALLTFGWGLYGQ 320
T G L TFG G +GQ
Sbjct: 259 TQDGLLFTFGAGKHGQ 274
>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
Length = 928
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 120/309 (38%), Gaps = 75/309 (24%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
++ +L P + +DV GCG + + G + T G +D GQ L K
Sbjct: 18 DEEIVLEPRKSDFFVNKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW-----------RECVPSAKVT 140
+ PE ++V + G AH +++ + G+VY WG EC+ +V
Sbjct: 72 RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECI---RVP 128
Query: 141 RDFGSAGSFQ--KDSTGKQSALPTEQAPP-----SDK--RAGEEVVKRRKTSSAREESEN 191
R+ S Q + + G +L +A +K + G + +++TS
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS-------- 180
Query: 192 PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
P L+ G+ +VAAGG H+ +L+ G ++GWG GQLGL
Sbjct: 181 -----------PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
P+L+ L + I CG H+A +T G +
Sbjct: 230 RY-VPNLLKSLRSQK------------------------IVYICCGEDHTAALTKEGGVF 264
Query: 312 TFGWGLYGQ 320
TFG G YGQ
Sbjct: 265 TFGAGGYGQ 273
>gi|159039902|ref|YP_001539155.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157918737|gb|ABW00165.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 546
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 100/264 (37%), Gaps = 42/264 (15%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
++A + +G ++ WG + GQ +G TP LP + AAG H V++T A
Sbjct: 99 SVALTAAGTVLAWGD-NSHGQLGDGTGADSLTPVGVSLPAGVTASAVAAGRDHSVALTSA 157
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAG--SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
G V WG FG G + ST ALP + V
Sbjct: 158 GTVLAWGGNS----------FGQLGDGTVVDRSTPVAVALPPSTTVTAVAAGATHSVALT 207
Query: 181 KTSSAREESENP----ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ NP G +P V L P +T VAAGG H++ L+ G V W
Sbjct: 208 SAGTVLAWGGNPFGQLGDGTVVDRSTPVAVALPPSTTVTAVAAGGNHSVALTSAGTVLAW 267
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G GQLG G+ + + P +V S AG + +A
Sbjct: 268 GRNFFGQLGDGTVVD-----------------RSTPTVV-------SLPAGVT-ASAVAA 302
Query: 297 GGRHSAVVTDAGALLTFGWGLYGQ 320
G HS +T AG +L +G +GQ
Sbjct: 303 GRIHSLALTTAGGVLAWGNNTFGQ 326
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 87/222 (39%), Gaps = 32/222 (14%)
Query: 39 LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE----- 93
L+P+ L G + V G ++A + +G ++ WG G S+ G+ G+
Sbjct: 128 LTPVGVSLPAGVTASAVAAG-RDHSVALTSAGTVLAWG-----GNSF---GQLGDGTVVD 178
Query: 94 --TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG--SF 149
TP LP +V AAG H V++T AG V WG FG G +
Sbjct: 179 RSTPVAVALPPSTTVTAVAAGATHSVALTSAGTVLAWGGNP----------FGQLGDGTV 228
Query: 150 QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA----REESENPASGDEFFTLSPCL 205
ST ALP + G V + R G +P +
Sbjct: 229 VDRSTPVAVALPPSTTVTAVAAGGNHSVALTSAGTVLAWGRNFFGQLGDGTVVDRSTPTV 288
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
V+L GV + VAAG H+L L+ G V WG GQLG G
Sbjct: 289 VSLPAGVTASAVAAGRIHSLALTTAGGVLAWGNNTFGQLGDG 330
>gi|356568831|ref|XP_003552611.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Glycine max]
Length = 474
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 148/350 (42%), Gaps = 76/350 (21%)
Query: 18 KETVVYMWGY----LPGTSPEKSPILSP--IPARLCG-----GDSWKDVCGGGCG--FAL 64
+++ +Y+WGY G ++ + P +P L G W DV CG
Sbjct: 17 RKSAIYVWGYNQSGQTGRKGKEDQLRIPKQLPPELFGCPAGTNARWLDV---ACGREHTA 73
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS-VTEAG 123
A + G L TWG A+D GQ + + + PE E+ VK+ + AHC + + E
Sbjct: 74 AIASDGSLFTWG-ANDFGQLGDGTEERRKLPEKVK-QLESEFVKSVSCGAHCSACIAEPH 131
Query: 124 E---------VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS--------ALPTEQAP 166
E ++ WG + + + R F G+F+ ++ ++ AL E
Sbjct: 132 ENDGTISTRRLWVWGQNQ---GSNLPRLF--WGAFKPNTIIREVSCGAVHVVALSEEGLL 186
Query: 167 PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
+ + R T + + +S +F +P LV KI KV+ G HT +
Sbjct: 187 QAWGYNEYGQLGRGVTCEGLQGACIISSYAKFLDEAPELV------KIAKVSCGEYHTAV 240
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
+SD G+V+ WG G GQLG S L++ D+ LL R+ V G
Sbjct: 241 ISDKGEVYTWGLGNMGQLGHSS-------------LQYG----DKELLPRR-VVTLDG-- 280
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQR-------MAKCLAGD 329
++K++ACGG H+ VT GAL +G G GQ + C+A D
Sbjct: 281 --IFIKDVACGGVHTCSVTQGGALYAWGGGRSGQLGLGPQTGLFSCVAND 328
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 89/235 (37%), Gaps = 47/235 (20%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
+ + + G H V+++E G + WG+ E ++ R G Q A ++A
Sbjct: 167 IREVSCGAVHVVALSEEGLLQAWGYNE---YGQLGRGVTCEG-LQGACIISSYAKFLDEA 222
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT--------------------LSPCL 205
P E+VK K S + + E +T L P
Sbjct: 223 P--------ELVKIAKVSCGEYHTAVISDKGEVYTWGLGNMGQLGHSSLQYGDKELLPRR 274
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
V G+ I VA GG HT ++ G ++ WG G GQLGLG P L C+ +
Sbjct: 275 VVTLDGIFIKDVACGGVHTCSVTQGGALYAWGGGRSGQLGLG------PQTGLFSCVAN- 327
Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
D R V K V+ +ACG H+ + G + +G+ YGQ
Sbjct: 328 ----DSQTFFRNIPVLVVPKG----VQLVACGYSHTLISMSDGRIHGWGYNNYGQ 374
>gi|90657578|gb|ABD96878.1| hypothetical protein [Cleome spinosa]
Length = 393
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 109/308 (35%), Gaps = 74/308 (24%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA + G L TWG + K P +V+AA G HC++V +
Sbjct: 50 SLAICDDGTLFTWGWNQRGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQ 109
Query: 123 GEVYTWGWRE--------------------------CVPSAKVTRDFGSAGSFQKDSTGK 156
G Y WG E C P V R + G+ T +
Sbjct: 110 GRAYAWGGNEYGQCGEEPGKDEMERPLRRDIVIPKRCAPKL-VVRQVAAGGTHSVVLTRE 168
Query: 157 QSALPTEQA-PPSDKRAGEEVVKRRKTSSAR-----------------------EESENP 192
Q PP D + V+ + + R E
Sbjct: 169 GHVWSWGQPWPPGDIKQISIPVRVQGLENVRLIAVGAFHNLALEENGTLWAWGNNEYGQL 228
Query: 193 ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD P V + + +AAGG H+ L+D G+V+GWG G G+LG G K
Sbjct: 229 GTGDTQPRSQPIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDK- 287
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
+ ++P + +G+D + +++CGG HS +T G + +
Sbjct: 288 --SSKMLPQKVNLLAGED--------------------IIQVSCGGTHSVALTRDGRIFS 325
Query: 313 FGWGLYGQ 320
FG G +G+
Sbjct: 326 FGRGDHGR 333
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 113/300 (37%), Gaps = 90/300 (30%)
Query: 18 KETVVYMWG--YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
+E V+ WG + PG + S IP R+ G ++ + + G LA E+G L W
Sbjct: 167 REGHVWSWGQPWPPGDIKQIS-----IPVRVQGLENVRLIAVGAF-HNLALEENGTLWAW 220
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWR 131
G+ Y G P P+P + ++V AAG H ++T+ GEVY WG
Sbjct: 221 GN-----NEYGQLGTGDTQPRSQPIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRG 275
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN 191
E G G D + K
Sbjct: 276 E----------HGRLGFGDNDKSSK----------------------------------- 290
Query: 192 PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI- 250
+ P V L G I +V+ GG H++ L+ G+++ +G G G+LG G ++
Sbjct: 291 ---------MLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGCGRKVT 341
Query: 251 --KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK--AGRSYVKEIACGGRHSAVVTD 306
+ + P IP E G N + + G+ K +ACGGRH+ + +
Sbjct: 342 TGQPLDVPVKIPPPE--------------GQFNDAAEDDDGKWVAKVVACGGRHTLAIVE 387
>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Takifugu rubripes]
Length = 1042
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 70/294 (23%), Positives = 117/294 (39%), Gaps = 58/294 (19%)
Query: 42 IPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
I R C K VC GCG + + G + T G +D GQ L K + PE
Sbjct: 23 IEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCG-CNDLGQ--LGHEKPRKKPEHVV 79
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
+V + G +H +++ + G++++WG GS G ++ +
Sbjct: 80 ALDAQIIVAVSGGESHTLALNDKGQIFSWG-------------LGSDGQLGLNNFEECVR 126
Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF-----------TLSPCLVTL 208
+P SD + + R + + + + + G F +P ++
Sbjct: 127 VPRNIKCLSDVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQS 186
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
G+ +++AGG H+ ++ G V+GWG GQLGL
Sbjct: 187 LQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDT------------------- 227
Query: 269 KDR--PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
DR P L++ S ++ R V ++CG H+A +T G + TFG G YGQ
Sbjct: 228 NDRWFPALLK------SLRSQR--VIYVSCGEDHTAALTKEGGVFTFGAGGYGQ 273
>gi|348583549|ref|XP_003477535.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Cavia
porcellus]
Length = 531
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 113/321 (35%), Gaps = 89/321 (27%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEV+ WG+ C G GS ST Q P K VKR
Sbjct: 144 AADGEVFAWGYNNC----------GQVGS---GSTANQ--------PTPRKVTNCLHVKR 182
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+ +A G ++ + D G+V+GWGY
Sbjct: 183 ----------------------------------VVGIACGQTSSMAVLDSGEVYGWGYN 208
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G GQLGLG+ + TP + L R V +I CG
Sbjct: 209 GNGQLGLGNNGNQL-TPMRVAALH------------------------RVCVNQIVCGYA 243
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
H+ +TD G L +G YGQ
Sbjct: 244 HTLALTDEGLLYAWGANTYGQ 264
>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
Length = 423
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 96/238 (40%), Gaps = 51/238 (21%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKD 152
TP+P + + A G +HC++VT GEV +WG + G G +D
Sbjct: 99 TPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWGRNQN----------GQLGLGTTED 148
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLS 202
S Q + AG E T++ E+ E N GD L
Sbjct: 149 SLVPQKIQAFQGVSVKMVAAGAE-----HTAAVTEDGELYGWGWGRYGNLGLGDRNDRLV 203
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P V+ GVK+ KVA G RHT+ +S G ++ +G+ GQLG G + TPH + L
Sbjct: 204 PEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHL-TPHKLEAL 262
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ + + EI+ G RH+ +T G L +GW +GQ
Sbjct: 263 Q------------------------ENLISEISGGWRHTMALTSDGKLYGWGWNKFGQ 296
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 98/263 (37%), Gaps = 43/263 (16%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G ++A + +WG +D GQ + +P VV G H +
Sbjct: 24 GASHSVALLXGNVVCSWGRGED-GQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTA 82
Query: 119 VTEA-GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
+E+ +VY+WG F L +Q D +
Sbjct: 83 YSESFTQVYSWG----------------CDLFTPQPIKALHGLRIKQIACGDSHCLAVTM 126
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
S R ++ G +L P + GV + VAAG HT +++ G+++GWG
Sbjct: 127 DGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWG 186
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
+G G LGLG R + P + +E G VK +ACG
Sbjct: 187 WGRYGNLGLGDRNDRL-VPEKVSTVE-----------------------GVKMVK-VACG 221
Query: 298 GRHSAVVTDAGALLTFGWGLYGQ 320
RH+ V+ +G L T+GW YGQ
Sbjct: 222 WRHTISVSSSGGLYTYGWSKYGQ 244
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 80/216 (37%), Gaps = 18/216 (8%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G A +E G+L WG G L PE +VK A GW H +S
Sbjct: 169 GAEHTAAVTEDGELYGWGWGR-YGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTIS 227
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
V+ +G +YT+GW + +G G + L Q + +G
Sbjct: 228 VSSSGGLYTYGWSK----------YGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHT 277
Query: 179 RRKTSSAR------EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
TS + + GD SP V K+ ++ G RHTL +++
Sbjct: 278 MALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTERQN 337
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
V+ WG G GQLG G I P +I L SG
Sbjct: 338 VFSWGRGTNGQLGHGESIDR-NIPKMIEVLSADGSG 372
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + +P P E VV + GW H +
Sbjct: 272 GGWRHTMALTSDGKLYGWG-WNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTL 330
Query: 118 SVTEAGEVYTWG 129
+VTE V++WG
Sbjct: 331 AVTERQNVFSWG 342
>gi|328704350|ref|XP_001948518.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Acyrthosiphon pisum]
Length = 1053
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 86/331 (25%), Positives = 128/331 (38%), Gaps = 65/331 (19%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKH 91
E++ ILSP + +S ++ CG LA +E G+L GS +D GQ G
Sbjct: 18 EENYILSP--EEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACGS-NDFGQL----GHD 70
Query: 92 GETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWGWRECVP-----------SAK 138
G + +P S+V A G AH +++ E G++YTWG C K
Sbjct: 71 GCRTKLQKIPGVESLVMTSVACGEAHSMALNEWGQLYTWGSDSCGQLGLETDEGIQYKPK 130
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
+ + S Q K T GE T + E +
Sbjct: 131 IVKTLASMLLVQISCGYKHCMALTNH--------GE-----LYTWGSNEFGQLGLGLGPG 177
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
P LV G+ I+ +A GG H+ ++S G V+GWG GQLG+ S+ + L
Sbjct: 178 NVSKPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTSLSSPAQL 237
Query: 259 IPC----LEHAASGKD-RPLLVRQGSVNSSGKAGR-----------------------SY 290
+++ A G+D L G V + G AG S
Sbjct: 238 KTIRTVKVKYIAGGEDFSVFLTYDGGVFTCG-AGMYGQLGHGSFSNEIVPRKVLELMGST 296
Query: 291 VKEIACGGRHS-AVVTDAGALLTFGWGLYGQ 320
V ++ CG RH+ +V G + +FG G GQ
Sbjct: 297 VTQVTCGRRHTLTLVPSKGRVYSFGLGSVGQ 327
>gi|296196028|ref|XP_002745648.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Callithrix jacchus]
Length = 1024
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 67/230 (29%), Positives = 101/230 (43%), Gaps = 66/230 (28%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVV---------K 108
CG +LA S+ G+L WG + GQ L G+ FP T +V +
Sbjct: 145 CGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRK------FPSTTAPQIVEHLAGIPLAQ 195
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDST----------- 154
+AG AH ++++ +G +Y+WG E FG G + KDS
Sbjct: 196 ISAGEAHSMALSMSGNIYSWGKNE----------FGQLGLDHTESKDSPSLIEALDNQKV 245
Query: 155 ------GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTL 208
G +AL T+ AG K + ++E L PCLV
Sbjct: 246 EFLACGGSHTALLTQDGLLFTFGAG----KHGQLGHNSTQNE----------LRPCLVAE 291
Query: 209 NPGVKITKVAAGGRHTLI-LSDMGQVWGWGYGGEGQLGL-GSRIKMVPTP 256
G ++T++A G HTL +SD+G+V+ +G G EGQLG G+R +++P P
Sbjct: 292 LAGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIPLP 341
Score = 61.2 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 58/121 (47%), Gaps = 25/121 (20%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T +P +V G+ + +++AG H++ LS G ++ WG GQLG
Sbjct: 179 TTAPQIVEHLAGIPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLG-------------- 224
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
L+H S KD P L+ V+ +ACGG H+A++T G L TFG G +G
Sbjct: 225 --LDHTES-KDSPSLIE--------ALDNQKVEFLACGGSHTALLTQDGLLFTFGAGKHG 273
Query: 320 Q 320
Q
Sbjct: 274 Q 274
>gi|300122163|emb|CBK22737.2| unnamed protein product [Blastocystis hominis]
Length = 355
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 96/273 (35%), Gaps = 69/273 (25%)
Query: 61 GFALATSESGKLITWGSADDEGQSYLTSGKHGE------TPEPFPLPTEASVVKAAAGWA 114
G A +E G + TWG T G+ G PE P VK A G
Sbjct: 113 GHMAAVTEDGSVWTWGRG--------TFGRLGHEVHETGIPEKVPGLDGMRFVKVACGHV 164
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H +++T+ G V+ WG G G + + Q D AG
Sbjct: 165 HTLALTDDGRVFAWG----------NNKTGCVGVSDRGTCAPQEIESLRGKKIIDISAGM 214
Query: 175 EVVKRRKTSSAREESENPA---SGDEF----------FTLSPCLVTLNPGVKITKVAAGG 221
E SSA +E+ D + + P + V I ++A G
Sbjct: 215 E-------SSAALSAEHEVYTWGADNYGQLGLGQGARYISQPTRIRTLRNVPIVQIACGQ 267
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
H L LS G+V+ WG G +GQ ++ PH+I L+
Sbjct: 268 YHMLALSAAGEVYAWGQGLQGQTANEKKVD-TNIPHVIDALK------------------ 308
Query: 282 SSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
S VK IA GG HSAVV D G L T G
Sbjct: 309 ------ESRVKMIAAGGSHSAVVDDKGRLFTVG 335
>gi|55249804|gb|AAH85921.1| Herc6 protein, partial [Rattus norvegicus]
Length = 1034
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 60/267 (22%), Positives = 97/267 (36%), Gaps = 86/267 (32%)
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ S + + PEP + + + G H V+V G V+TWG
Sbjct: 55 NSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWG--------- 105
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G + + S +PT+
Sbjct: 106 ----AGSEGQLGIGESKEISFMPTK----------------------------------- 126
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
+ G+KI +V+ G H+L LS+ GQV+ WG +GQLGLG+ + +P
Sbjct: 127 -------INSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQK 179
Query: 259 IPCLE-----HAASGKDRPLLV------------RQGSVNSSGKAGRSYVKE-------- 293
+ LE A+G + R G + SG + + + +
Sbjct: 180 VKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALK 239
Query: 294 ------IACGGRHSAVVTDAGALLTFG 314
I+CG H++V+T+ G + TFG
Sbjct: 240 TLNVVYISCGYEHTSVLTEDGQVFTFG 266
Score = 48.9 bits (115), Expect = 0.004, Method: Composition-based stats.
Identities = 76/321 (23%), Positives = 124/321 (38%), Gaps = 88/321 (27%)
Query: 26 GYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSY 85
G L SP+ + PI A D+ G ++A G++ TWG A EGQ
Sbjct: 58 GQLGQKSPQSTKRPEPIQAL---STVHIDLVSCGKEHSVAVCHQGRVFTWG-AGSEGQLG 113
Query: 86 LTSGKHGETPEPFPLPTEAS------VVKAAAGWAHCVSVTEAGEVYTWGWR-------- 131
+ GE+ E +PT+ + +++ + G H ++++E G+V++WG
Sbjct: 114 I-----GESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLG 168
Query: 132 ---------------ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
E +P A+V G SF G + R+G+
Sbjct: 169 NNLCSQASPQKVKSLEGIPLAQVAA--GGTHSFALSLMGTSFGW-------GNNRSGQLA 219
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ +SA+E+ P S L TLN + ++ G HT +L++ GQV+ +
Sbjct: 220 L---SGNSAKEQIYKPHS-------IGALKTLN----VVYISCGYEHTSVLTEDGQVFTF 265
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G QL R SG+ P L+ G G +V +I C
Sbjct: 266 GGSSSEQLQHSPR-----------------SGRGGPQLIE-------GIGG--HVSQIEC 299
Query: 297 GGRHS-AVVTDAGALLTFGWG 316
G H+ A V G +++ G G
Sbjct: 300 GSYHTIAYVYTTGQVVSLGRG 320
Score = 42.7 bits (99), Expect = 0.22, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 28/111 (25%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--RIKMVPTPHLIPCLEHAASGK 269
V I V+ G H++ + G+V+ WG G EGQLG+G I +PT
Sbjct: 80 VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPT-------------- 125
Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+NS AG + +++CG HS +++ G + ++G GQ
Sbjct: 126 ---------KINSL--AGIKII-QVSCGHYHSLALSEDGQVFSWGSNRQGQ 164
>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
Length = 1052
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 67/288 (23%), Positives = 109/288 (37%), Gaps = 83/288 (28%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P K P+ PIP L + CG ++A +E G++++WG D + T
Sbjct: 73 PTKRPL--PIP-ELQAYVVIQIACGSR--HSMALTEWGQILSWGDNDCGQVGHSTDNDVI 127
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
E P+ +VV+ A G H +++T GE+Y+WG + +G G
Sbjct: 128 ELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWG----------SNIYGQLGV---- 173
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
Q+P + P S +P +T G+
Sbjct: 174 -----------QSP----------------------KDLPHSN------APLRLTTILGI 194
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+ +A GG H+ ++S V+GWG GQLGL ++R
Sbjct: 195 PLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDE-------------------QNRA 235
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ S+ + G V+ + CG +S +T+ G + T G G YGQ
Sbjct: 236 YPSQLKSMRTLG------VRFVTCGDEYSVFLTNEGGVFTCGAGNYGQ 277
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 59/146 (40%), Gaps = 26/146 (17%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
L P + P + ++A G RHTL L+ GQV+ G QLG K +P P L
Sbjct: 25 LLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTKRPLPIPELQ 84
Query: 260 P--CLEHAASGKDRPLLVRQGSV-----NSSGKAGRS------------------YVKEI 294
++ A + L G + N G+ G S V +I
Sbjct: 85 AYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQI 144
Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQ 320
ACG HS +T G L ++G +YGQ
Sbjct: 145 ACGNNHSLALTSCGELYSWGSNIYGQ 170
Score = 47.0 bits (110), Expect = 0.012, Method: Composition-based stats.
Identities = 65/258 (25%), Positives = 97/258 (37%), Gaps = 71/258 (27%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVVKAAAGWAH 115
G +LA + G+L +WGS + GQ + S K H P + A G H
Sbjct: 147 GNNHSLALTSCGELYSWGS-NIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNH 205
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
++++ V+ WG C Q L EQ RA
Sbjct: 206 SFLISKSSAVFGWGKNTC----------------------GQLGLNDEQ-----NRAYPS 238
Query: 176 VVKRRKTSSAREESENPASGDEF----------FT-----------------LSPCLVTL 208
+K +T R + GDE+ FT + P +V
Sbjct: 239 QLKSMRTLGVRFVT----CGDEYSVFLTNEGGVFTCGAGNYGQLGHGASNNEMIPRMVIE 294
Query: 209 NPGVKITKVAAGGRHTLIL-SDMGQVWGWGYGGEGQLGLGSRI-----KMVPTPHLIP-- 260
G IT+VA G RHTL L G+V+ +G G GQLG + I K+V P + P
Sbjct: 295 LMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTISQTLPKVVIGPWVSPNG 354
Query: 261 -CLEHAASGKDRPLLVRQ 277
L ++ G D+ +++R+
Sbjct: 355 SALMESSEGADKSVVIRK 372
>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
Length = 1052
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 67/288 (23%), Positives = 109/288 (37%), Gaps = 83/288 (28%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P K P+ PIP L + CG ++A +E G++++WG D + T
Sbjct: 73 PTKRPL--PIP-ELQAYVVIQIACGSR--HSMALTEWGQILSWGDNDCGQVGHSTDNDVI 127
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
E P+ +VV+ A G H +++T GE+Y+WG + +G G
Sbjct: 128 ELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWG----------SNIYGQLGV---- 173
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
Q+P + P S +P +T G+
Sbjct: 174 -----------QSP----------------------KDLPHSN------APLRLTTILGI 194
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+ +A GG H+ ++S V+GWG GQLGL ++R
Sbjct: 195 PLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDE-------------------QNRA 235
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ S+ + G V+ + CG +S +T+ G + T G G YGQ
Sbjct: 236 YPSQLKSMRTLG------VRFVTCGDEYSVFLTNEGGVFTCGAGNYGQ 277
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 59/146 (40%), Gaps = 26/146 (17%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
L P + P + ++A G RHTL L+ GQV+ G QLG K +P P L
Sbjct: 25 LLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTKRPLPIPELQ 84
Query: 260 P--CLEHAASGKDRPLLVRQGSV-----NSSGKAGRS------------------YVKEI 294
++ A + L G + N G+ G S V +I
Sbjct: 85 AYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQI 144
Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQ 320
ACG HS +T G L ++G +YGQ
Sbjct: 145 ACGNNHSLALTSCGELYSWGSNIYGQ 170
Score = 47.0 bits (110), Expect = 0.012, Method: Composition-based stats.
Identities = 65/258 (25%), Positives = 97/258 (37%), Gaps = 71/258 (27%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVVKAAAGWAH 115
G +LA + G+L +WGS + GQ + S K H P + A G H
Sbjct: 147 GNNHSLALTSCGELYSWGS-NIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNH 205
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
++++ V+ WG C Q L EQ RA
Sbjct: 206 SFLISKSSAVFGWGKNTC----------------------GQLGLNDEQ-----NRAYPS 238
Query: 176 VVKRRKTSSAREESENPASGDEF----------FT-----------------LSPCLVTL 208
+K +T R + GDE+ FT + P +V
Sbjct: 239 QLKSMRTLGVRFVT----CGDEYSVFLTNEGGVFTCGAGNYGQLGHGVSNNEMIPRMVIE 294
Query: 209 NPGVKITKVAAGGRHTLIL-SDMGQVWGWGYGGEGQLGLGSRI-----KMVPTPHLIP-- 260
G IT+VA G RHTL L G+V+ +G G GQLG + I K+V P + P
Sbjct: 295 LMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTISQTLPKVVIGPWVSPSG 354
Query: 261 -CLEHAASGKDRPLLVRQ 277
L ++ G D+ +++R+
Sbjct: 355 SALMESSEGADKSVVIRK 372
>gi|281344276|gb|EFB19860.1| hypothetical protein PANDA_001439 [Ailuropoda melanoleuca]
Length = 993
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 28/135 (20%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP----HL--IPCLEHAAS 267
I ++A G H+L LS G+++ WG GQLG+G +PTP HL +P ++ +A
Sbjct: 108 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAG 167
Query: 268 GKDRPLLVRQGSV-----NSSGKAGRSY-----------------VKEIACGGRHSAVVT 305
L G+V N G+ G + V+ +ACGG H+A++T
Sbjct: 168 KAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLT 227
Query: 306 DAGALLTFGWGLYGQ 320
G + TFG G YGQ
Sbjct: 228 TDGLVFTFGAGKYGQ 242
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 113/253 (44%), Gaps = 51/253 (20%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEASVV 107
K + CG +LA S+ G+L WG + GQ L G+ TP+ + +V
Sbjct: 106 KSIIQIACGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRLFASIPTPQAVEHLSGVPLV 162
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWR------------ECVPSAKVTRD-----FGSAGSFQ 150
+ +AG AH ++++ +G VY+WG E PS T D F + G
Sbjct: 163 QISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACG--- 219
Query: 151 KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNP 210
G +AL T AG + ++N L P LVT
Sbjct: 220 ----GSHTALLTTDGLVFTFGAG------KYGQLGHNSTQNE--------LRPRLVTELA 261
Query: 211 GVKITKVAAGGRHTL-ILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTPHLIPC---LEHA 265
G ++T++A G RHTL +SD+G+V+ +G G EGQLG G+ +++P P +P L+
Sbjct: 262 GNRVTQIACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFE 321
Query: 266 ASGKDRPLLVRQG 278
+ D+ L++ G
Sbjct: 322 SRTSDKELVMIAG 334
>gi|432098306|gb|ELK28108.1| X-linked retinitis pigmentosa GTPase regulator, partial [Myotis
davidii]
Length = 1369
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 106/269 (39%), Gaps = 95/269 (35%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA----GW 113
G + A +E GKL WG + EGQ L + + P E +V K A G+
Sbjct: 141 AGSNTSAALTEDGKLFMWGE-NSEGQIGLNNVCN------VYFPHEVTVGKPIAWISCGY 193
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H VT GE+YT+G E FG G LP
Sbjct: 194 YHSAFVTMEGELYTFGEPE----------FGKLG------------LP------------ 219
Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV--KITKVAAGGRHTLILSDMG 231
++++ K P LV PG+ K+ +VA GG HT++L++
Sbjct: 220 KQLLMNHKV--------------------PQLV---PGIPEKVIQVACGGGHTVVLTEKA 256
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
V+ +G G GQLGLG+ + P ++ S KD +
Sbjct: 257 -VYNFGLGQFGQLGLGTFVFETTEPKIM------ESVKDHKITY---------------- 293
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
I+CG H+A++TD G + TFG G YG+
Sbjct: 294 --ISCGENHTALITDIGRMYTFGDGRYGK 320
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 63/144 (43%), Gaps = 29/144 (20%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL- 262
C+ L P K+ VA G HTL+ ++ G+V+ G EGQLGLG + T HLI
Sbjct: 74 CVKALKPE-KVKHVACGRNHTLVSTEGGKVYAVGGNNEGQLGLGD-TEDRNTFHLIEFFT 131
Query: 263 -EH-----AASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IAC 296
+H +A L G + NS G+ G + V I+C
Sbjct: 132 SQHQFKQLSAGSNTSAALTEDGKLFMWGENSEGQIGLNNVCNVYFPHEVTVGKPIAWISC 191
Query: 297 GGRHSAVVTDAGALLTFGWGLYGQ 320
G HSA VT G L TFG +G+
Sbjct: 192 GYYHSAFVTMEGELYTFGEPEFGK 215
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 12/76 (15%)
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR---IKMVP 254
F T P ++ KIT ++ G HT +++D+G+++ +G G G+LGLG + VP
Sbjct: 275 FETTEPKIMESVKDHKITYISCGENHTALITDIGRMYTFGDGRYGKLGLGMENFTNQFVP 334
Query: 255 T---------PHLIPC 261
T HL+ C
Sbjct: 335 TLCPNFLRFKVHLVAC 350
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 30/135 (22%)
Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASGK 269
T +A G HT +++ +++ +G GQLGLGS+ V P + L +H A G+
Sbjct: 32 TFLACGDEHTAVITGNKKLYMFGRNDWGQLGLGSK-SAVCKPTCVKALKPEKVKHVACGR 90
Query: 270 DRPLLVRQGSV------NSSGKAG------------------RSYVKEIACGGRHSAVVT 305
+ L+ +G N+ G+ G + K+++ G SA +T
Sbjct: 91 NHTLVSTEGGKVYAVGGNNEGQLGLGDTEDRNTFHLIEFFTSQHQFKQLSAGSNTSAALT 150
Query: 306 DAGALLTFGWGLYGQ 320
+ G L +G GQ
Sbjct: 151 EDGKLFMWGENSEGQ 165
>gi|344281814|ref|XP_003412672.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Loxodonta
africana]
Length = 531
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 118/317 (37%), Gaps = 91/317 (28%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + V+++G GT +S ++ LCG K + G L +
Sbjct: 32 NEALYVTDNDEVFVFGMNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSAPHVLLS 90
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
+E G + WG G S L +G + P + T VV+ A G H +++ G
Sbjct: 91 TEDGVVYAWGH---NGYSQLGNGTTNQGVAPIQVCTNLLIKQVVEVACGSHHSMALAADG 147
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
EV+ WG+ C G GS ST Q PT R+ T+
Sbjct: 148 EVFAWGYNNC----------GQVGS---GSTANQ---PT---------------PRKVTN 176
Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
+ K+ +A G ++ + D G+V+GWGY G GQ
Sbjct: 177 CLHIK------------------------KVVGIACGQTSSMAVLDNGEVYGWGYNGNGQ 212
Query: 244 LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
LGLG+ + TP VR +++S V +I CG H+
Sbjct: 213 LGLGNNGNQL-TP------------------VRVAALHSVC------VNQIVCGYAHTLA 247
Query: 304 VTDAGALLTFGWGLYGQ 320
+TD G L +G YGQ
Sbjct: 248 LTDEGLLYAWGANTYGQ 264
>gi|440906559|gb|ELR56810.1| RCC1 domain-containing protein 1, partial [Bos grunniens mutus]
Length = 165
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 20/137 (14%)
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AA GW H V ++E G++Y WGW E A T+ G +++G +
Sbjct: 6 AAGGW-HSVCLSETGDIYIWGWNESGQLALPTKSLAEDGKTTAEASGLE----------- 53
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
G EV ++ S+ + + P + F P L+ L+PG + KV+ G RHT +L+
Sbjct: 54 --EDGSEV---KRGSAGEDGAPAPFIAVQPF---PALLDLSPGSEAVKVSCGSRHTAVLT 105
Query: 229 DMGQVWGWGYGGEGQLG 245
G+++ WG+G GQLG
Sbjct: 106 RTGELYTWGWGKYGQLG 122
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 59/130 (45%), Gaps = 32/130 (24%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
++ +VAAGG H++ LS+ G ++ WG+ GQL L PT L E + +
Sbjct: 1 RMAEVAAGGWHSVCLSETGDIYIWGWNESGQLAL-------PTKSLA---EDGKTTAEAS 50
Query: 273 LLVRQGSVNSSGKAGR----------------------SYVKEIACGGRHSAVVTDAGAL 310
L GS G AG S +++CG RH+AV+T G L
Sbjct: 51 GLEEDGSEVKRGSAGEDGAPAPFIAVQPFPALLDLSPGSEAVKVSCGSRHTAVLTRTGEL 110
Query: 311 LTFGWGLYGQ 320
T+GWG YGQ
Sbjct: 111 YTWGWGKYGQ 120
>gi|440898458|gb|ELR49953.1| RCC1 and BTB domain-containing protein 2, partial [Bos grunniens
mutus]
Length = 544
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 99/238 (41%), Gaps = 42/238 (17%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL K C G G LAT+E G++ TWG S L +G P+
Sbjct: 82 PRRLDSLSGKKIACLSYGSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNAGLVPYH 137
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG+ ++G ST
Sbjct: 138 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY-------------NNSGQVGSGSTAN 184
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--------------ASGDEFFTLS 202
Q +P + + + S A + +SG++ +
Sbjct: 185 Q-PIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQ---PT 240
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
PC V G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP ++
Sbjct: 241 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVV 298
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L P ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 133 LVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 191
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 192 TGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 251
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 252 VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 281
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A +G++ WG
Sbjct: 166 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGY- 224
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 225 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 275
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 25/127 (19%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+ +
Sbjct: 74 GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNAGL 133
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
H+ S N S K V E+ACG HS V+T G + +
Sbjct: 134 VPYHI--------------------STNLSNKQ----VIEVACGSYHSLVLTSDGEVFAW 169
Query: 314 GWGLYGQ 320
G+ GQ
Sbjct: 170 GYNNSGQ 176
>gi|426236323|ref|XP_004012119.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Ovis aries]
Length = 527
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 99/238 (41%), Gaps = 42/238 (17%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL K C G G LAT+E G++ TWG S L +G P+
Sbjct: 65 PRRLDSLTGKKIACLSYGSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNAGLVPYH 120
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG+ ++G ST
Sbjct: 121 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY-------------NNSGQVGSGSTAN 167
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--------------ASGDEFFTLS 202
Q +P + + + S A + +SG++ +
Sbjct: 168 Q-PIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQ---PT 223
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
PC V G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP ++
Sbjct: 224 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVV 281
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L P ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 116 LVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 174
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 175 TGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 234
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 235 VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 264
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A +G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 25/127 (19%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+ +
Sbjct: 57 GDVQSTIEPRRLDSLTGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNAGL 116
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
H+ S N S K V E+ACG HS V+T G + +
Sbjct: 117 VPYHI--------------------STNLSNKQ----VIEVACGSYHSLVLTSDGEVFAW 152
Query: 314 GWGLYGQ 320
G+ GQ
Sbjct: 153 GYNNSGQ 159
>gi|300794901|ref|NP_001179920.1| RCC1 and BTB domain-containing protein 2 [Bos taurus]
gi|296481887|tpg|DAA24002.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
domain containing protein 2 [Bos taurus]
Length = 527
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 99/238 (41%), Gaps = 42/238 (17%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL K C G G LAT+E G++ TWG S L +G P+
Sbjct: 65 PRRLDSLSGKKIACLSYGSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNAGLVPYH 120
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG+ ++G ST
Sbjct: 121 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY-------------NNSGQVGSGSTAN 167
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--------------ASGDEFFTLS 202
Q +P + + + S A + +SG++ +
Sbjct: 168 Q-PIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQ---PT 223
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
PC V G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP ++
Sbjct: 224 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVV 281
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L P ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 116 LVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 174
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 175 TGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 234
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 235 VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 264
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A +G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 25/127 (19%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+ +
Sbjct: 57 GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNAGL 116
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
H+ S N S K V E+ACG HS V+T G + +
Sbjct: 117 VPYHI--------------------STNLSNKQ----VIEVACGSYHSLVLTSDGEVFAW 152
Query: 314 GWGLYGQ 320
G+ GQ
Sbjct: 153 GYNNSGQ 159
>gi|351715554|gb|EHB18473.1| RCC1 domain-containing protein 1 [Heterocephalus glaber]
Length = 370
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 82/199 (41%), Gaps = 47/199 (23%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL +G++ +WG G+HG+ EP P P EA + +
Sbjct: 164 GIEHALLLDAAGQVFSWGG-----------GRHGQLGHGTLEAEPEPRPLEALQGLPMSQ 212
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V V+E G++Y WGW E A TR ++ TG+ L
Sbjct: 213 LAAGGWHSVCVSETGDIYIWGWNESGQLALPTRSLAEG---KRTDTGEDEGL-------- 261
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSP--CLVTLNPGVKITKVAAGGRHTLI 226
S +E PA F + P L+ L G + V+ G RHT +
Sbjct: 262 ----------NEDGSKVERAAEAPAP---FIAIQPFPALLDLPLGSEAVGVSCGSRHTAV 308
Query: 227 LSDMGQVWGWGYGGEGQLG 245
++ G+++ WG+G GQLG
Sbjct: 309 VTRTGELYTWGWGKYGQLG 327
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 101/249 (40%), Gaps = 48/249 (19%)
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD-FGSA 146
SG+ + P PL + +A W++ VT G V G +A RD + S
Sbjct: 23 SGREHQVLSPEPLRAGGDICHVSASWSYTALVTRGGRVELSG--SASGAADGCRDAWASE 80
Query: 147 G--SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS---------- 194
G +D +G ++ L + PP GE + + + EE + P +
Sbjct: 81 GLLVLLRDRSGSRAEL--QAWPPGSGLRGEPLWAQDPEA---EEGDEPGAEGRTGLLPLL 135
Query: 195 --GDEFFTLSPCLV-TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
+ +L P L L P ++ ++ G H L+L GQV+ WG G GQLG G+ ++
Sbjct: 136 PGSRAYVSLQPPLRRALAPELRARRLELGIEHALLLDAAGQVFSWGGGRHGQLGHGT-LE 194
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
P P RPL QG S ++A GG HS V++ G +
Sbjct: 195 AEPEP--------------RPLEALQGLPMS----------QLAAGGWHSVCVSETGDIY 230
Query: 312 TFGWGLYGQ 320
+GW GQ
Sbjct: 231 IWGWNESGQ 239
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 25/127 (19%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G+ ++++AAGG H++ +S+ G ++ WG+ GQL L PT L + +G+D
Sbjct: 207 GLPMSQLAAGGWHSVCVSETGDIYIWGWNESGQLAL-------PTRSLAEG-KRTDTGED 258
Query: 271 RPLLVRQGSVNSSGKAGRSYVK-----------------EIACGGRHSAVVTDAGALLTF 313
L V + +A ++ ++CG RH+AVVT G L T+
Sbjct: 259 EGLNEDGSKVERAAEAPAPFIAIQPFPALLDLPLGSEAVGVSCGSRHTAVVTRTGELYTW 318
Query: 314 GWGLYGQ 320
GWG YGQ
Sbjct: 319 GWGKYGQ 325
>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
[Pan troglodytes]
Length = 979
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 118/302 (39%), Gaps = 61/302 (20%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
++ +L P + +DV GCG + + G + T G +D GQ L K
Sbjct: 18 DEEIVLEPRKSDFFINKRVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW-----------RECVPSAKVT 140
+ PE ++V + G AH +++ + G+VY WG EC+ +V
Sbjct: 72 RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECI---RVP 128
Query: 141 RDFGSAGSFQ--KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
R+ S Q + + G +L +A + + + ++++
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT--------- 179
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
SP L+ G+ +VAAGG H+ +L+ G ++GWG GQLGL P+L
Sbjct: 180 ---SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNL 235
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ L + I CG H+A +T G + TFG G Y
Sbjct: 236 LKSLRSQK------------------------IVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 319 GQ 320
GQ
Sbjct: 272 GQ 273
>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Pan paniscus]
Length = 979
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 118/302 (39%), Gaps = 61/302 (20%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
++ +L P + +DV GCG + + G + T G +D GQ L K
Sbjct: 18 DEEIVLEPRKSDFFINKRVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW-----------RECVPSAKVT 140
+ PE ++V + G AH +++ + G+VY WG EC+ +V
Sbjct: 72 RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECI---RVP 128
Query: 141 RDFGSAGSFQ--KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
R+ S Q + + G +L +A + + + ++++
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT--------- 179
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
SP L+ G+ +VAAGG H+ +L+ G ++GWG GQLGL P+L
Sbjct: 180 ---SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNL 235
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ L + I CG H+A +T G + TFG G Y
Sbjct: 236 LKSLRSQK------------------------IVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 319 GQ 320
GQ
Sbjct: 272 GQ 273
>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
Length = 1057
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 62/262 (23%), Positives = 96/262 (36%), Gaps = 80/262 (30%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA + G++ +WGS + T + TP +VV+ A+G H ++
Sbjct: 97 GTTHSLALTNWGQVFSWGSNSIGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLA 156
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+T +GE+++WG +G G L T GE+VV
Sbjct: 157 LTNSGELFSWG----------ANGYGQLG------------LGT---------TGEKVV- 184
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
+P LV G+ I +A GG H+ +S G ++GWG
Sbjct: 185 -----------------------TPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGK 221
Query: 239 GGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
GQLGL + P + L + V+ I+CG
Sbjct: 222 NTFGQLGLNDLVSRC-FPQQLKTLRNLG------------------------VRYISCGD 256
Query: 299 RHSAVVTDAGALLTFGWGLYGQ 320
SA +T G + T G G +GQ
Sbjct: 257 DFSAFLTQEGGVFTCGAGTFGQ 278
Score = 60.8 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 75/310 (24%), Positives = 114/310 (36%), Gaps = 97/310 (31%)
Query: 22 VYMWGY-------LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFA--LATSESGKL 72
VY WG L G E+ +L P C S V CG + L ++ GKL
Sbjct: 3 VYCWGNTVHGELGLGGIEDEQ--VLLPREMDWCHSSS---VQQAACGTSHTLLLTKDGKL 57
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ G+ D + T + P+ V + G H +++T G+V++W
Sbjct: 58 FSCGNNDHGQLGHDTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSW---- 113
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP 192
GS G + L T P ++K T +
Sbjct: 114 --------------GSNSIGQLGHDTDLQTYTTP--------RMIKTIATKT-------- 143
Query: 193 ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+ ++A+G H+L L++ G+++ WG G GQLGLG+ +
Sbjct: 144 ---------------------VVQIASGQFHSLALTNSGELFSWGANGYGQLGLGTTGEK 182
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
V TP L+ L AG + IACGG HS V+ +GA+
Sbjct: 183 VVTPTLVKSL-----------------------AGIP-IAFIACGGNHSFAVSKSGAI-- 216
Query: 313 FGWG--LYGQ 320
FGWG +GQ
Sbjct: 217 FGWGKNTFGQ 226
>gi|432863735|ref|XP_004070156.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1080
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 67/139 (48%), Gaps = 29/139 (20%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-------SRIKMVPTPHLIPCLE 263
G+ +T+VA G +HT++LS GQV+ WG GQLGLG S + V + +P ++
Sbjct: 121 GITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQ 180
Query: 264 HAASGKDRPLLVRQGSV-----NSSGKAGR---------SYVKEI--------ACGGRHS 301
+A G L GSV N G+ G + V + ACG H+
Sbjct: 181 VSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLVHYLNMKKTVFAACGKDHT 240
Query: 302 AVVTDAGALLTFGWGLYGQ 320
AV+T G + TFG G YGQ
Sbjct: 241 AVLTMDGTVFTFGSGHYGQ 259
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 109/270 (40%), Gaps = 51/270 (18%)
Query: 5 GSKREENEKMEECKETVVYMWGYLPGTSPEKSPILS-------------PIPARLCGGDS 51
G++ + +K EC+E + + G + + +LS P R S
Sbjct: 66 GTREKRKQKFVECEERLAAV-----GCTDDGVTLLSDTGVVFCVDSPHPPFTPRSLEALS 120
Query: 52 WKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEAS 105
V CG + S+ G++ TWG + GQ L GK G +P+ +
Sbjct: 121 GITVTQVACGSQHTVVLSKDGQVYTWGQ-NSRGQ--LGLGKEGCSSISSPQCVRSLSSMP 177
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
VV+ +AG H +++ +G V+ WG +C G G D+T +++ PT
Sbjct: 178 VVQVSAGGDHSFALSVSGSVFGWGRNDC----------GQLGL--GDTTDRET--PTLVH 223
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFF----------TLSPCLVTLNPGVKIT 215
+ K+ + T+ + G + L P LV G K+T
Sbjct: 224 YLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELWGAKVT 283
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
K+A G HTL+L+D +V+ +G GQLG
Sbjct: 284 KIACGRYHTLVLTDHMKVYSFGCNEHGQLG 313
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 85/230 (36%), Gaps = 33/230 (14%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
TP + +V + A G H V +++ G+VYTWG +++ G G S
Sbjct: 112 TPRSLEALSGITVTQVACGSQHTVVLSKDGQVYTWG-----QNSRGQLGLGKEGCSSISS 166
Query: 154 ---TGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNP 210
S++P Q + V R + GD +P LV
Sbjct: 167 PQCVRSLSSMPVVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLVHYLN 226
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
K A G HT +L+ G V+ +G G GQLG S + P L+ L A
Sbjct: 227 MKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLGHNS-FRNALCPRLVAELWGAK---- 281
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V +IACG H+ V+TD + +FG +GQ
Sbjct: 282 --------------------VTKIACGRYHTLVLTDHMKVYSFGCNEHGQ 311
>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
Length = 1031
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 47/137 (34%), Positives = 61/137 (44%), Gaps = 28/137 (20%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP-HL-----IPCLEHA 265
++I +VA G H+L LS ++ WG GQLGLGS IK P H+ IP A
Sbjct: 121 IQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIA 180
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAG----------------RSY-VKEIACGGRHSAV 303
A G L G++ N G+ G RS + I CG H+A
Sbjct: 181 AGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAA 240
Query: 304 VTDAGALLTFGWGLYGQ 320
+T G + TFG G YGQ
Sbjct: 241 LTKEGGVFTFGAGGYGQ 257
Score = 61.2 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 71/293 (24%), Positives = 108/293 (36%), Gaps = 89/293 (30%)
Query: 60 CGFA--LATSESGKLITWGSADDEGQSYLTSGK-HGETPEPFPLPTEASVVKAAAGWAHC 116
CG A LA ++ G++ +WG A GQ L+ + + P + +V+ A G H
Sbjct: 75 CGEAHTLALNDKGQVFSWGHAA-HGQIGLSVAEDYIRVPRNIKSLYDIQIVQVACGHHHS 133
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++++ ++Y+WG Q G S + E AP
Sbjct: 134 LALSKESDIYSWGQN------------------QYGQLGLGSEIKKESAP---------- 165
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
R S A G+ +AAGG H+ L+ G ++GW
Sbjct: 166 --RHIKSLA-------------------------GIPFAHIAAGGGHSFALTMSGAIFGW 198
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQGSVNSSGKAGR-- 288
G GQLGL P L+ L H G+D L ++G V + G G
Sbjct: 199 GRNKFGQLGLNDETDR-SAPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQ 257
Query: 289 --------------------SYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQ 320
S V +IACG +H+ A V +G + +FG G GQ
Sbjct: 258 LGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQ 310
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 42/132 (31%), Positives = 55/132 (41%), Gaps = 31/132 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASG 268
I V+ G HTL L+D GQV+ WG+ GQ+GL + P I L A G
Sbjct: 70 IVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDIQIVQVACG 129
Query: 269 KDRPL-LVRQGSVNSSGK-------AGRSYVKE----------------IACGGRHSAVV 304
L L ++ + S G+ G KE IA GG HS +
Sbjct: 130 HHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGGGHSFAL 189
Query: 305 TDAGALLTFGWG 316
T +GA+ FGWG
Sbjct: 190 TMSGAI--FGWG 199
Score = 41.6 bits (96), Expect = 0.51, Method: Composition-based stats.
Identities = 54/236 (22%), Positives = 82/236 (34%), Gaps = 63/236 (26%)
Query: 18 KETVVYMWGYLP----GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLI 73
KE+ +Y WG G E +P + G + + GG G + A + SG +
Sbjct: 138 KESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGG-GHSFALTMSGAIF 196
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
WG + GQ L P ++ G H ++T+ G V+T+G
Sbjct: 197 GWGR-NKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFG---- 251
Query: 134 VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA 193
G G +ST + V RK
Sbjct: 252 ---------AGGYGQLGHNSTNHE-------------------VNPRKV----------- 272
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL-ILSDMGQVWGWGYGGEGQLGLGS 248
F L G +T++A G +HTL + G+++ +G GG GQLG GS
Sbjct: 273 -----FELM--------GSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGS 315
>gi|330796931|ref|XP_003286517.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
gi|325083498|gb|EGC36949.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
Length = 815
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 117/282 (41%), Gaps = 43/282 (15%)
Query: 40 SPIPAR-LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
+PI + L + D+ G F+ A ++SGK+ TWG +++GQ L +P+
Sbjct: 194 TPIQVQGLLANEEVIDI-SAGWAFSAAVTKSGKIFTWG-FNEKGQLGLKHRWFNSSPQLV 251
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST---G 155
+ +V + G H +VTE G++YTWG FG G S
Sbjct: 252 KTLLDVKIVSVSCGRQHIGAVTEDGDLYTWGLGV----------FGQLGHSNVKSYLHPK 301
Query: 156 KQSALPTEQAPPSDKRAGEE---VVKRRKTSSA-----------REESENPASG---DEF 198
K +A S G V+ R + A EE+++ G + F
Sbjct: 302 KVAAFSLNGIQVSQVSCGSNFTMVLGRNQILYAFGHGEYAQLGATEETQHLDMGSRDNHF 361
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVP--- 254
SP +V KI V G HTL L++ +V+ WG+G G LGL S R ++VP
Sbjct: 362 KYSSPKVVEALEDKKIKYVTCGHLHTLALTEDNEVYVWGWGSSGCLGLNSKRFQLVPQLV 421
Query: 255 ---TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
+ I C+ ++G+ L+VR + S + V E
Sbjct: 422 TSISGEEISCI---SAGEKHSLIVRGSDLTSFAFDYKGLVNE 460
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 111/283 (39%), Gaps = 51/283 (18%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQ-----SYLTSGKHGETPEPFPLPTEASVVKAA 110
C G + S G + +WG EGQ L S K P VVK A
Sbjct: 39 CSSGEAHNICVSRFGDVYSWGRGK-EGQLGVPEKMLFSTK----PNLIKTLLHERVVKVA 93
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G H +++T+ G VY WG + +K + + G + K + S
Sbjct: 94 CGNFHSLALTDQGRVYEWGQLHKIDDSKTGLE-ATNGLLEMPGMSKPKYQSIIENSVSQY 152
Query: 171 RAGEEVVKRRKTSSAREESENPASGDE------------FFTLSPCLVT-LNPGVKITKV 217
GE+ + ++S + ++ AS E + +P V L ++ +
Sbjct: 153 LNGEKEI--YDSTSGNNDDDDEASTSEQSKGKHIGKIIDYNQTTPIQVQGLLANEEVIDI 210
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
+AG + ++ G+++ WG+ +GQLGL R +P L+ L L V+
Sbjct: 211 SAGWAFSAAVTKSGKIFTWGFNEKGQLGLKHRW-FNSSPQLVKTL----------LDVKI 259
Query: 278 GSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
SV +CG +H VT+ G L T+G G++GQ
Sbjct: 260 VSV--------------SCGRQHIGAVTEDGDLYTWGLGVFGQ 288
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 26/116 (22%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P ++ G I ++G H + +S G V+ WG G EGQLG+ ++ P+LI
Sbjct: 23 LEPKVLESLKGKVIVSCSSGEAHNICVSRFGDVYSWGRGKEGQLGVPEKMLFSTKPNLIK 82
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
L H V ++ACG HS +TD G + + WG
Sbjct: 83 TLLHER------------------------VVKVACGNFHSLALTDQGRV--YEWG 112
>gi|195449389|ref|XP_002072053.1| GK22640 [Drosophila willistoni]
gi|194168138|gb|EDW83039.1| GK22640 [Drosophila willistoni]
Length = 1261
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 70/281 (24%), Positives = 102/281 (36%), Gaps = 84/281 (29%)
Query: 43 PARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
P RL G +V CG +L ++SG +++WG +D GQ L + P +
Sbjct: 66 PFRLVAGLQDIEVSAIACGSSHSLVLTKSGVVMSWG-VNDCGQ--LGQTTNSRVPTMVKV 122
Query: 101 PTEASV-VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
P + + V+ A G H +++T G +Y+WG + +G G
Sbjct: 123 PDKKPLFVQIACGNEHSLALTNDGTIYSWG----------SNRYGQLG------------ 160
Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
E EN S F P +T G+ I +A
Sbjct: 161 --------------------------MSEPEN-MSNCHF----PMHLTSIHGIPIATIAC 189
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
GG H ++S V+GWG GQLGL DRP +
Sbjct: 190 GGNHCFLISKSSAVYGWGRNNRGQLGLNDL-------------------SDRPYPTELTT 230
Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ G V+ +ACG S +T GAL T G G +GQ
Sbjct: 231 LRPCG------VRYVACGDEFSVFLTHKGALFTCGDGTHGQ 265
>gi|74002225|ref|XP_851549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Canis lupus
familiaris]
Length = 1015
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 67/145 (46%), Gaps = 32/145 (22%)
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IP 260
TLN +KI +V+ G H+L LS+ GQV+ WG +GQLGLG + +P IP
Sbjct: 124 TLN-DIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIP 182
Query: 261 CLEHAASGKDRPLLVRQGS-------------VNSSGKAGRSY------------VKEIA 295
+ AA G L G+ ++ + +G+SY V I+
Sbjct: 183 LAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYIS 242
Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQ 320
CG H+ V+T G + TFG YGQ
Sbjct: 243 CGYEHTVVLTQNGKVFTFGDNTYGQ 267
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 108/271 (39%), Gaps = 45/271 (16%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET---PEPFPLPTEASVVKAA 110
D+ G +LA G++ WG A EGQ L +G+ ET P + + + +
Sbjct: 78 DLVSCGKEHSLAVCHKGRVFAWG-AGSEGQ--LGTGEFKETNLIPMKIKTLNDIKIKQVS 134
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP--- 167
G H ++++E G+V++WG + + F S S Q+ +P Q
Sbjct: 135 CGHYHSLALSEGGQVFSWG-SNSDGQLGLGKKFPSQASPQR--VRSLDGIPLAQVAAGGA 191
Query: 168 ---SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
+ +G R + +N SG + P ++ + + ++ G HT
Sbjct: 192 HSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSY---KPYSISALKNLGVIYISCGYEHT 248
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
++L+ G+V+ +G GQLG PT + K P LV G
Sbjct: 249 VVLTQNGKVFTFGDNTYGQLGHS------PT-----------AEKSGPQLVE-------G 284
Query: 285 KAGRSYVKEIACGGRHS-AVVTDAGALLTFG 314
G V +I CG H+ A V G +++FG
Sbjct: 285 IDG--LVSQIDCGSYHTLAYVYTTGKVVSFG 313
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 42/140 (30%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG--------SRIKMVPTPH--LIP 260
GV++ + A+G RH+L+L GQV G G GQLG RI+ + T H L+
Sbjct: 22 GVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKRIRALETLHVDLVS 81
Query: 261 CLEHAASGKDRPLLV-RQGSV-----NSSGKAGR------------------SYVKEIAC 296
C GK+ L V +G V S G+ G +K+++C
Sbjct: 82 C------GKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSC 135
Query: 297 GGRHSAVVTDAGALLTFGWG 316
G HS +++ G + F WG
Sbjct: 136 GHYHSLALSEGGQV--FSWG 153
>gi|403355741|gb|EJY77458.1| hypothetical protein OXYTRI_00911 [Oxytricha trifallax]
Length = 922
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 119/308 (38%), Gaps = 68/308 (22%)
Query: 41 PIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGS---ADDEGQSYLTSGKHGETP 95
P P + G +++ CG + A +G L TWG + ++GQ E P
Sbjct: 304 PQPVQALYG---REIVQIDCGDFHSAALDGNGDLYTWGGGAPSYNKGQCGHGHNNALEYP 360
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WRECVPSAKVTRDFGSAGSFQKD 152
E + +VK A G H +++T E+Y +G + EC G F
Sbjct: 361 EKVKYLSSKRIVKVACGGFHTLALTSENELYGFGSGNYGEC-----------GNGEFMDT 409
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
S K P + K+ T E DE F L + L
Sbjct: 410 SKPKLIKFPNDHLD----------TKKNVTDDLEEYGH-----DEEFVLE---MYLKEQP 451
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+I AAGGRH+LI+++ G+++ +GYG GQLG +++ C AA
Sbjct: 452 QILDFAAGGRHSLIITNKGRLYSFGYGTNGQLG-----------NVVQC---AAGWNHSM 497
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
+L +G V S G G ++ G + D+ TF L + ++K AG
Sbjct: 498 ILTERGDVFSCGYGGHG---QLGHGDK------DSRTQFTFVQSLGNKNISKIFAG---- 544
Query: 333 MGSWVWVT 340
GS WV
Sbjct: 545 -GSHSWVV 551
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 24/125 (19%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P VT G+ +++ HT +++ GQ+ G G+LG+ S + ++P
Sbjct: 189 LLPRFVTGVKGMTAKWISSSNHHTAMITQDGQIVVSGSSLHGKLGIESNKTNINKFQIVP 248
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
L+ R K+++CG H+ V+ + G + FG L+
Sbjct: 249 TLQ------------------------RKRAKQVSCGDYHTLVLIEDGTVYQFGGSLFKD 284
Query: 321 RMAKC 325
+ K
Sbjct: 285 KKDKI 289
>gi|444729790|gb|ELW70194.1| putative E3 ubiquitin-protein ligase HERC6 [Tupaia chinensis]
Length = 1378
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 61/119 (51%), Gaps = 25/119 (21%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P +V GV + +++AG H++ LS G V+ WG GQLGLG
Sbjct: 937 TPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSWGKNDFGQLGLG-------------- 982
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
H S KD P L+R +++S V +ACGG H+A++T G + TFG G YGQ
Sbjct: 983 --HTES-KDSPSLLR--ALDSQK------VDFLACGGSHTALLTQDGLVFTFGAGKYGQ 1030
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 67/152 (44%), Gaps = 31/152 (20%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL- 258
+ +P + G+KI +V+ G H+L LS+ GQV+ WG GQLGLG + +P
Sbjct: 138 SFTPQKIKALAGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVPSQTSPQRV 197
Query: 259 -----IPCLEHAASGKDRPLLVRQGS-----VNSSGKAGRSYVKE--------------- 293
IP + AA G L G+ NS+G+ S K
Sbjct: 198 RSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNSAGQLALSGTKAPVQRYKPLSVGALKT 257
Query: 294 -----IACGGRHSAVVTDAGALLTFGWGLYGQ 320
I+CG H+AV+T GA+ TFG GQ
Sbjct: 258 LGVVYISCGSEHTAVLTQNGAVYTFGANSSGQ 289
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 87/200 (43%), Gaps = 51/200 (25%)
Query: 70 GKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVY 126
G+L WG + GQ L G+ TP+ +V+ +AG AH ++++ G VY
Sbjct: 913 GELFAWGQ-NSHGQ--LGLGRIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVY 969
Query: 127 TWGWRECVPSAKVTRDFGSAG---SFQKDST-----------------GKQSALPTEQAP 166
+WG DFG G + KDS G +AL T+
Sbjct: 970 SWG----------KNDFGQLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALLTQDGL 1019
Query: 167 PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL- 225
AG+ + SS R+E L PCLVT G ++T++A G HTL
Sbjct: 1020 VFTFGAGK--YGQLGHSSTRDE------------LRPCLVTELLGNRVTQIACGRWHTLA 1065
Query: 226 ILSDMGQVWGWGYGGEGQLG 245
+S++G+V+ +G G GQLG
Sbjct: 1066 YVSELGKVFAFGSGKNGQLG 1085
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 24/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+++ V+ G H+L + G+V+ WG G EGQLG+G + TP I L
Sbjct: 97 LRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKERSFTPQKIKAL--------- 147
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
AG + +++CG HS +++ G + ++G +GQ
Sbjct: 148 --------------AGIKII-QVSCGYYHSLALSEDGQVFSWGKNSHGQ 181
>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 1525
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 128/332 (38%), Gaps = 73/332 (21%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSY--LTSG 89
+PE++P++S I + G F+LA + G L WG G Y L G
Sbjct: 109 APEQAPVVSNIVS-----------VAAGRLFSLALASDGSLWAWG-----GNYYGQLGMG 152
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
+ P P + V A G H ++ T++GEV+ G D G G
Sbjct: 153 DNDNRLTPSKTPGLSDVAAIAGGDYHALAATQSGEVWAMG----------RNDHGQLGF- 201
Query: 150 QKDSTGKQSALPTEQAPPSDKR---AGEEV---VKRRKTSSAREESENPA-----SGDEF 198
TG + P + A S+ + AGE +K T A +E+ +G+
Sbjct: 202 ----TGDHADAPVQVAGLSNVKSVAAGEFFSLALKNDGTVWAWGNNESAQLGTGIAGEAV 257
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
T +P V N IT +AAG RH + L++ G VW WG G GQLG G + P
Sbjct: 258 ATPAPIAVLSN----ITAIAAGRRHAMALAEDGSVWAWGANGSGQLGFGD-FETPKAPGR 312
Query: 259 IPCLEHA---ASGKDRPLLVRQGSV------NSSGKAGRSYVKE---------------I 294
+ L ASG L + V N G+ G +
Sbjct: 313 VSSLADVTAIASGWFHSLALTSDGVLWAWGNNGDGRLGTDATSDQSLPAQVSSISNAVSF 372
Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQRMAKCL 326
A G RHS + G++ ++G YGQ + L
Sbjct: 373 AGGQRHSLAIAADGSVWSWGGNAYGQLGVESL 404
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 49/105 (46%), Gaps = 24/105 (22%)
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
K+AAG H L L+ G VW WGY +GQLGLGS S K+RP +
Sbjct: 1037 KIAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTY--------------STKNRPQKI 1082
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
S V IACGG HS V G+L ++G+ YGQ
Sbjct: 1083 N----------AISNVAAIACGGSHSLAVARDGSLWSWGYNYYGQ 1117
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 118/290 (40%), Gaps = 39/290 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA--SVVKAAAGWAHC 116
G F+LA G L +WG D G L G P +A K AAG H
Sbjct: 989 GGNFSLALKTDGSLWSWG---DNGTGQLGLGLGQSVNVFTPTKVDALPPAAKIAAGDNHA 1045
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ-KDSTGKQSALPTEQAPPSDKRAGEE 175
+++ G V++WG+ ++ GS+G++ K+ K +A+ A
Sbjct: 1046 LALAPDGSVWSWGY-----NSDGQLGLGSSGTYSTKNRPQKINAISNVAAIACGGSHSLA 1100
Query: 176 VVKRRKT-SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
V + S GD + +P V N + +AAG ++L L+ G VW
Sbjct: 1101 VARDGSLWSWGYNYYGQLGLGDNYSKTTPQKV--NAISNVAAIAAGEYYSLALTRDGSVW 1158
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPL-LVRQGSV-----NSSGK 285
WG +GQLGLG + TP + L + A+G+D L L R GSV NS G+
Sbjct: 1159 SWGDNSDGQLGLGDN-EDRNTPQKVEVLSNVAAIAAGEDHSLALTRDGSVWSWGRNSRGQ 1217
Query: 286 AGR---------------SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G S +K IA G HS +++ G +G+ GQ
Sbjct: 1218 LGLDDNDDRNTPQPVTTISNIKAIAAGNSHSFAISEEGLAWAWGYNYDGQ 1267
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 112/293 (38%), Gaps = 36/293 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G G ALA + G + +WG T G + P + ++V A G +H ++
Sbjct: 552 GGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISNVAAIACGGSHSLA 611
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+ G ++WG+ G + K + K +AL A + R +
Sbjct: 612 LARDGSFWSWGY-------NYYGQLGLGDNVSKTTPRKVNALSNVVAMAAGDRHSLALTL 664
Query: 179 RRKTSSAREESENPAS-GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
S + + GD +P V N + +AAG RH+L L+ G VW WG
Sbjct: 665 DGSLWSWGDNTYGQLGLGDNDHRNTPRKV--NAISNVVAIAAGYRHSLALTRDGSVWSWG 722
Query: 238 YGGEGQLGLGSR-IKMVPTP-HLIPCLEHAASGKDRPLLVRQGSV------NSSGKAG-- 287
GQLGLG + P P I ++ A G + + + + + N SG+ G
Sbjct: 723 NNTRGQLGLGDNDDRNTPQPVTTISNIKAIAVGNNYSIAISEEGLVWAWGYNCSGQLGIG 782
Query: 288 ----------------RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQRMAK 324
S V ++ G HS +T+ GAL +G GQ A+
Sbjct: 783 THGSLADENTPQKVIVISNVVGLSAGSSHSIALTEDGALWAWGNNEAGQIAAE 835
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 115/296 (38%), Gaps = 51/296 (17%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF------PLPTEASVVKAAAG 112
G GF+LA G + +WG+ S GE + F LP AS+ AAG
Sbjct: 500 GGGFSLALKTDGSVWSWGN----NGSGQLGLGLGENDDVFTPTNVDALPLAASI---AAG 552
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H +++ G V++WG R V + + ++ K +A+ A
Sbjct: 553 GGHALALASDGSVWSWG-RNSVGQLGLGTGGTYS---TENRPQKINAISNVAAIAC---G 605
Query: 173 GEEVVKRRKTSSAREESENPAS----GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
G + + S N GD +P V N + +AAG RH+L L+
Sbjct: 606 GSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTPRKV--NALSNVVAMAAGDRHSLALT 663
Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH----AASGKDRPLLVRQGSV---- 280
G +W WG GQLGLG TP + + + AA + L R GSV
Sbjct: 664 LDGSLWSWGDNTYGQLGLGDN-DHRNTPRKVNAISNVVAIAAGYRHSLALTRDGSVWSWG 722
Query: 281 -NSSGKAGR---------------SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
N+ G+ G S +K IA G +S +++ G + +G+ GQ
Sbjct: 723 NNTRGQLGLGDNDDRNTPQPVTTISNIKAIAVGNNYSIAISEEGLVWAWGYNCSGQ 778
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 104/274 (37%), Gaps = 44/274 (16%)
Query: 10 ENEKMEECKETVVYMWGYLP------GTS--------PEKSPILSPIPARLCGGDSWKDV 55
+N + + V+ WGY G+S P+K +S + A CGG
Sbjct: 1042 DNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNVAAIACGG------ 1095
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
+LA + G L +WG + GQ L TP+ + ++V AAG +
Sbjct: 1096 -----SHSLAVARDGSLWSWGY-NYYGQLGLGDNYSKTTPQK--VNAISNVAAIAAGEYY 1147
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
+++T G V++WG G + +++ K L A + +
Sbjct: 1148 SLALTRDGSVWSWG-------DNSDGQLGLGDNEDRNTPQKVEVLSNVAAIAAGEDHSLA 1200
Query: 176 VVKRRKTSSAREESENPA---SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
+ + S S D+ T P N I +AAG H+ +S+ G
Sbjct: 1201 LTRDGSVWSWGRNSRGQLGLDDNDDRNTPQPVTTISN----IKAIAAGNSHSFAISEEGL 1256
Query: 233 VWGWGYGGEGQLGLGSRIKMV--PTPHLIPCLEH 264
W WGY +GQLG+G+ + TP + + +
Sbjct: 1257 AWAWGYNYDGQLGIGTSGSLANENTPQKVKVISN 1290
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 110/306 (35%), Gaps = 54/306 (17%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA + G L WG+ G L + + P + + ++ V A G H +++
Sbjct: 329 SLALTSDGVLWAWGN---NGDGRLGTDATSDQSLPAQVSSISNAVSFAGGQRHSLAIAAD 385
Query: 123 GEVYTWGWR--------ECVPSAKVT--RDFGSAGSFQ--KDSTGKQSALPTEQAPPSDK 170
G V++WG P++ +T S F D+ G +A + D
Sbjct: 386 GSVWSWGGNAYGQLGVESLTPASVLTPVHTLYSGEDFHLFYDTDGDGAANIWDDDDDGDG 445
Query: 171 RAGEEVVKRRKTSSAREESENPASGD-------EFFTLSPCLVTL-NPGVKITKVAAGGR 222
E ++ +E+ + +GD +FF + P NP VAAGG
Sbjct: 446 FLDESDNCPCVSNPGQEDEDGDGTGDFCDGCPGDFFKIQPGFSGCGNPN---PMVAAGGG 502
Query: 223 HTLILSDMGQVWGWGYG-GEGQLGLGSRIKMVPTPHLIPCLEHAAS----GKDRPLLVRQ 277
+L L G VW WG V TP + L AAS G L
Sbjct: 503 FSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVDALPLAASIAAGGGHALALASD 562
Query: 278 GSVNSSGK-----------------------AGRSYVKEIACGGRHSAVVTDAGALLTFG 314
GSV S G+ S V IACGG HS + G+ ++G
Sbjct: 563 GSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISNVAAIACGGSHSLALARDGSFWSWG 622
Query: 315 WGLYGQ 320
+ YGQ
Sbjct: 623 YNYYGQ 628
>gi|345795569|ref|XP_535652.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Canis lupus familiaris]
Length = 1263
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 28/135 (20%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAAS 267
I ++ G H+L LS G+++ WG GQLG+G +PTP L +P ++ +A
Sbjct: 379 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAG 438
Query: 268 GKDRPLLVRQGSV-----NSSGKAGRSY-----------------VKEIACGGRHSAVVT 305
L G++ N G+ G + V+ +ACGG H+A++T
Sbjct: 439 KAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLT 498
Query: 306 DAGALLTFGWGLYGQ 320
G + TFG G YGQ
Sbjct: 499 KDGLVFTFGAGKYGQ 513
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 106/237 (44%), Gaps = 52/237 (21%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEASVV 107
K + CG +LA S+ G+L WG + GQ L G+ TP+ + +V
Sbjct: 377 KSIIQITCGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRLFTSIPTPQLVEHLSGVPLV 433
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWR-------------------ECVPSAKVTRDFGSAGS 148
+ +AG AH ++++ +G +Y+WG E + + KV +F + G
Sbjct: 434 QISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKV--EFLACG- 490
Query: 149 FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTL 208
G +AL T+ AG + ++N L P LVT
Sbjct: 491 ------GSHTALLTKDGLVFTFGAG------KYGQLGHNSTQN--------ELRPRLVTE 530
Query: 209 NPGVKITKVAAGGRHTL-ILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTPHLIPCLE 263
G ++T+VA G HTL +SD+G+V+ +G G EGQLG G+ +++P P +P E
Sbjct: 531 LAGNRVTQVACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNE 587
>gi|221487646|gb|EEE25878.1| UVb-resistance protein uvr8, putative [Toxoplasma gondii GT1]
Length = 578
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 63/139 (45%), Gaps = 31/139 (22%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P +++ V++ +V G +H L LSD G+V+ +G G GQLGLG ++V P +
Sbjct: 65 LQPVVISALANVRVVEVCVGEQHALFLSDAGEVFAYGQGIYGQLGLGYERQVVHLPQKV- 123
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G R V++IACG HS VT GA+ F WG
Sbjct: 124 ----------------------EGALSRFPVRQIACGDYHSVAVTREGAV--FAWG---- 155
Query: 321 RMAKCLAGDGINMGSWVWV 339
A C+ GDG + + V
Sbjct: 156 -AADCV-GDGSGLCRFAPV 172
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 97/251 (38%), Gaps = 64/251 (25%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ- 164
V + A G H V+VT G V+ WG +CV D +G P
Sbjct: 132 VRQIACGDYHSVAVTREGAVFAWGAADCV----------------GDGSGLCRFAPVRLS 175
Query: 165 --APPSDKRAGEEVVKRRKTSSAREESENPAS-GDEFF-----TLSPCLVTLNPGVKITK 216
A P D A + R + ++A ES G+ FF T V P + +
Sbjct: 176 LGASPGD--ACRVIAARFQQTAAVSESGRLLVWGETFFADFHATPEVLCVFFRP---VVQ 230
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI---------PCLEHAAS 267
VA G L+L+D GQV+GWG G G+L + K +P P ++ P +E A
Sbjct: 231 VAIGKHFGLVLTDDGQVYGWGDGTYGELSPMA-PKTLPEPLILKDSSGQSLPPVVEIATG 289
Query: 268 GKDRPLLVRQGSV-----NSSGKAG-------------------RSYVKEIACGGRHSAV 303
+ LL + N +G+ G RS +IACG RHSA
Sbjct: 290 TRHAILLTHDMRLWALGDNLAGQCGVPGHQTRLSVPKMVKLGELRSRASKIACGYRHSAC 349
Query: 304 VTDAGALLTFG 314
+T L +G
Sbjct: 350 ITPNNQLYLWG 360
>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
Length = 1055
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 68/281 (24%), Positives = 108/281 (38%), Gaps = 85/281 (30%)
Query: 43 PARLCGGDSWKDVC-GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
P RL +++ C G +LA + G++ +WGS + GQ ++G P P +
Sbjct: 80 PQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGS-NAVGQ-LGHDAENGRQPTPRMIK 137
Query: 102 TEAS--VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
+ VV+ A+G HC+++T GE+Y WG + S+ + G S
Sbjct: 138 AIGAKHVVQIASGQYHCLALTNNGELYAWG----------------SNSYGQLGIGTTS- 180
Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
E+ P P L+ GV I +A
Sbjct: 181 ---EKVP-----------------------------------MPTLIQSLAGVPIAFIAC 202
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
GG H+ +S G ++GWG GQLGL + + P +R +
Sbjct: 203 GGNHSFAVSKSGAIFGWGKNTFGQLGLND-----------------LNSRCYPTQLR--T 243
Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ S G V+ I+CG S +T+ G + T G G +GQ
Sbjct: 244 LRSLG------VRYISCGDDFSVFLTNEGGVFTCGAGTFGQ 278
Score = 45.4 bits (106), Expect = 0.036, Method: Composition-based stats.
Identities = 56/208 (26%), Positives = 84/208 (40%), Gaps = 51/208 (24%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT------EASVVKAAAGWAHCV 117
LA + +G+L WGS SY G G T E P+PT + A G H
Sbjct: 155 LALTNNGELYAWGS-----NSYGQLGI-GTTSEKVPMPTLIQSLAGVPIAFIACGGNHSF 208
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
+V+++G ++ GW + FG G +S + L T ++ +
Sbjct: 209 AVSKSGAIF--GWGK--------NTFGQLGLNDLNSRCYPTQLRTLRS-----------L 247
Query: 178 KRRKTSSAREESENPASGDEFFTLSP----------CLVTLNP-------GVKITKVAAG 220
R S + S + FT C + P G KIT++A G
Sbjct: 248 GVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPRKVFELMGSKITQIACG 307
Query: 221 GRHTL-ILSDMGQVWGWGYGGEGQLGLG 247
RHTL + G+++G+G GG GQLG+G
Sbjct: 308 RRHTLAFVPSRGKIYGFGLGGVGQLGIG 335
>gi|335296869|ref|XP_003357882.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sus scrofa]
Length = 531
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 116/321 (36%), Gaps = 89/321 (27%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEV+ WG+ C G GS ST Q P K +KR
Sbjct: 144 AADGEVFAWGYNNC----------GQVGS---GSTANQ--------PTPRKVTNCLHIKR 182
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+ +A G ++ + D G+V+GWGY
Sbjct: 183 ----------------------------------VVSIACGQTSSMAVLDNGEVYGWGYN 208
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G GQLGLG+ + TP VR +++S V +I CG
Sbjct: 209 GNGQLGLGNNGNQL-TP------------------VRVAALHSVC------VNQIVCGYA 243
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
H+ +TD G L +G YGQ
Sbjct: 244 HTLALTDEGLLYAWGANTYGQ 264
>gi|432104195|gb|ELK31017.1| RCC1 and BTB domain-containing protein 2 [Myotis davidii]
Length = 526
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 100/238 (42%), Gaps = 43/238 (18%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL K C G G LAT+E G++ TWG S L +G P
Sbjct: 65 PRRLDSLSGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 120
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG+ ++G ST
Sbjct: 121 ISTNLSNKHVIEVACGSYHSLVLTSDGEVFAWGY-------------NNSGQVGSGSTAN 167
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--------------ASGDEFFTLS 202
Q +P + + + S A ++ +SG++ +
Sbjct: 168 Q-PIPRRVTSSLQNKVVVNIACGQMCSMAVVDNGEVYVWGYNGNGQLGLGSSGNQS---T 223
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
PC + L GV++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP ++
Sbjct: 224 PCRLALQ-GVRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVV 280
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 30/149 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 116 LVPCHISTNLSNKHVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 174
Query: 260 ------PCLEHAASGKDRPL-LVRQGSV-----NSSGKAGR----------------SYV 291
+ + A G+ + +V G V N +G+ G V
Sbjct: 175 TSSLQNKVVVNIACGQMCSMAVVDNGEVYVWGYNGNGQLGLGSSGNQSTPCRLALQGVRV 234
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +ACG H+ V+TD G + +G YGQ
Sbjct: 235 QRVACGYAHTLVLTDEGQVYAWGANSYGQ 263
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 7/112 (6%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ K V CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTSSLQNKVVVNIACGQMCSMAVVDNGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE-ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P L + V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGSSGNQSTPCRLALQGVRVQRVACGYAHTLVLTDEGQVYAWG 257
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 58/128 (45%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 57 GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 111
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K +V E+ACG HS V+T G +
Sbjct: 112 -TNHGLVPC---------------HISTNLSNK----HVIEVACGSYHSLVLTSDGEVFA 151
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 152 WGYNNSGQ 159
>gi|26326847|dbj|BAC27167.1| unnamed protein product [Mus musculus]
Length = 377
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 11/131 (8%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+++ KVAAGG H++ LS+ G ++ WG+ GQL L +R
Sbjct: 202 LEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREE 261
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI-----------ACGGRHSAVVTDAGA 309
E G L V + A + + + +CG RH+AVVT G
Sbjct: 262 ATELNEDGLKEELAVADAGAPAHFIAIQPFPALVDLPLGSDAVMASCGSRHTAVVTRTGE 321
Query: 310 LLTFGWGLYGQ 320
L T+GWG YGQ
Sbjct: 322 LYTWGWGKYGQ 332
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 79/201 (39%), Gaps = 49/201 (24%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G L +G++ +WG+ G+HG+ E P EA + K
Sbjct: 169 GAEHVLLLCAAGQVFSWGA-----------GRHGQLGHGTLEAELEPRLLEALQGLRMAK 217
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V ++E G++Y WGW E Q ALPT +
Sbjct: 218 VAAGGWHSVCLSETGDIYIWGWNE----------------------SGQLALPTRSG--T 253
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGD--EFFTLSP--CLVTLNPGVKITKVAAGGRHT 224
+ +A E +EE +G F + P LV L G + G RHT
Sbjct: 254 ENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALVDLPLGSDAVMASCGSRHT 313
Query: 225 LILSDMGQVWGWGYGGEGQLG 245
+++ G+++ WG+G GQLG
Sbjct: 314 AVVTRTGELYTWGWGKYGQLG 334
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 97/253 (38%), Gaps = 42/253 (16%)
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
Q+ + H P PL + + +AGW++ VT G V G +A RD
Sbjct: 19 QALGSGNSHHSVYSPEPLHASDDICQVSAGWSYTALVTRGGRVELSG--SVSGAADGCRD 76
Query: 143 FGSAGSFQKDSTGKQSALPTEQA-PPSDKRAGEEVVKRRKTSSAREESENPASGDE---F 198
++ K + QA P GE + + S A+ + E+ S +
Sbjct: 77 VWASEELLVLLRNKGGSSTEVQAWVPGSALQGEPLWVQNLVSGAKGQGEDEPSRESRMGT 136
Query: 199 FTLSPC---LVT--------LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
L PC VT L P +++ ++ G H L+L GQV+ WG G GQLG G
Sbjct: 137 LPLLPCARAYVTPEPPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHG 196
Query: 248 SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA 307
+ ++ P L+ L+ K +A GG HS +++
Sbjct: 197 T-LEAELEPRLLEALQGLRMAK------------------------VAAGGWHSVCLSET 231
Query: 308 GALLTFGWGLYGQ 320
G + +GW GQ
Sbjct: 232 GDIYIWGWNESGQ 244
>gi|302804446|ref|XP_002983975.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
gi|300148327|gb|EFJ14987.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
Length = 435
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 93/237 (39%), Gaps = 48/237 (20%)
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW------------RECVPSAKVTRDF 143
+P+ P V A+AG H +++TE G VYTWG+ RE +P ++
Sbjct: 127 KPYVNPRIKRVQMASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLP--RLLEGP 184
Query: 144 GSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSP 203
+ G SA TE +GE R R NP DE P
Sbjct: 185 WKDRIVHVSAGGSHSAAVTE--------SGELYTWGRDEGEGRLGHGNPDIMDEGALSRP 236
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
V V I V GG T+ L+ GQ+W WG +LG G+R P ++ LE
Sbjct: 237 TKVQALD-VPIASVYCGGFFTMALTKSGQLWSWGGNANHELGHGTRANNW-KPKVVAALE 294
Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ ++ACGG H+A +T G ++T+G+G GQ
Sbjct: 295 DVT------------------------LVQVACGGFHAAALTQDGKVITWGYGGNGQ 327
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 76/190 (40%), Gaps = 10/190 (5%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
+A +E G + TWG + S + P P + +V +AG +H +VTE+G
Sbjct: 148 IALTEVGNVYTWGYGAFGALGH-GSYERELLPRLLEGPWKDRIVHVSAGGSHSAAVTESG 206
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
E+YTWG E + G+ + + + + + P + G S
Sbjct: 207 ELYTWGRDE----GEGRLGHGNPDIMDEGALSRPTKVQALDVPIASVYCGGFFTMALTKS 262
Query: 184 SAR-----EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
+ G P +V V + +VA GG H L+ G+V WGY
Sbjct: 263 GQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGY 322
Query: 239 GGEGQLGLGS 248
GG GQLG G+
Sbjct: 323 GGNGQLGHGT 332
>gi|444732065|gb|ELW72388.1| RCC1 and BTB domain-containing protein 2 [Tupaia chinensis]
Length = 527
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P + T S V++ A G
Sbjct: 82 GSGPHVVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 137
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 138 YHSLVLTSDGEVFAWGY-------------NNSGQVGSGSTANQ-PIPRRVTGCLQNKVV 183
Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ + S A ++ +SG++ +PC V+ G+++ +VA
Sbjct: 184 VNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ---PTPCRVSALQGIRVQRVAC 240
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
G HTL+L+D GQV+ WG GQLG G++ PTP ++
Sbjct: 241 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVV 281
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 116 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 174
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 175 TGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVSALQGIR 234
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 235 VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 264
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 57 GDVQSTIEPRRLDCLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGT----- 111
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 112 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 151
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 152 WGYNNSGQ 159
>gi|47682199|gb|AAH69844.1| Rccd1 protein [Mus musculus]
Length = 377
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 11/131 (8%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+++ KVAAGG H++ LS+ G ++ WG+ GQL L +R
Sbjct: 202 LEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTEKKAEREE 261
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI-----------ACGGRHSAVVTDAGA 309
E G L V + A + + + +CG RH+AVVT G
Sbjct: 262 ATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGE 321
Query: 310 LLTFGWGLYGQ 320
L T+GWG YGQ
Sbjct: 322 LYTWGWGKYGQ 332
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 80/201 (39%), Gaps = 49/201 (24%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G L +G++ +WG+ G+HG+ E P EA + K
Sbjct: 169 GAEHVLLLCTAGQVFSWGA-----------GRHGQLGHGTLEAELEPRLLEALQGLRMAK 217
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V ++E G++Y WGW E Q ALPT +
Sbjct: 218 VAAGGWHSVCLSETGDIYIWGWNE----------------------SGQLALPTRSG--T 253
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGD--EFFTLSP--CLVTLNPGVKITKVAAGGRHT 224
+K+A E +EE +G F + P L+ L G + G RHT
Sbjct: 254 EKKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHT 313
Query: 225 LILSDMGQVWGWGYGGEGQLG 245
+++ G+++ WG+G GQLG
Sbjct: 314 AVVTRTGELYTWGWGKYGQLG 334
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 97/253 (38%), Gaps = 42/253 (16%)
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
Q+ + H P PL + + +AGW++ VT G V G +A RD
Sbjct: 19 QALGSGNSHHSVYSPEPLHASDDICQVSAGWSYTALVTRGGRVELSG--SVSGAADGCRD 76
Query: 143 FGSAGSFQKDSTGKQSALPTEQA-PPSDKRAGEEVVKRRKTSSAREESENPASGDE---F 198
++ K A QA P GE + + S A+ + E+ S +
Sbjct: 77 VWASEELLVLLRNKGGASTELQAWVPGSALQGEPLWVQNLVSGAKGQGEDEPSRESRMGT 136
Query: 199 FTLSPC---LVT--------LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
L PC VT L P +++ ++ G H L+L GQV+ WG G GQLG G
Sbjct: 137 LPLLPCARAYVTPEPPFCQPLAPELRVRQLELGAEHVLLLCTAGQVFSWGAGRHGQLGHG 196
Query: 248 SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA 307
+ ++ P L+ L+ K +A GG HS +++
Sbjct: 197 T-LEAELEPRLLEALQGLRMAK------------------------VAAGGWHSVCLSET 231
Query: 308 GALLTFGWGLYGQ 320
G + +GW GQ
Sbjct: 232 GDIYIWGWNESGQ 244
>gi|221507444|gb|EEE33048.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii VEG]
Length = 668
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 63/139 (45%), Gaps = 31/139 (22%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P +++ V++ +V G +H L LSD G+V+ +G G GQLGLG ++V P +
Sbjct: 155 LQPVVISALANVRVVEVCVGEQHALFLSDAGEVFAYGQGIYGQLGLGYERQVVHLPQKV- 213
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G R V++IACG HS VT GA+ F WG
Sbjct: 214 ----------------------EGALSRFPVRQIACGDYHSVAVTREGAV--FAWG---- 245
Query: 321 RMAKCLAGDGINMGSWVWV 339
A C+ GDG + + V
Sbjct: 246 -AADCV-GDGSGLCRFAPV 262
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 98/253 (38%), Gaps = 66/253 (26%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ- 164
V + A G H V+VT G V+ WG +CV D +G P
Sbjct: 222 VRQIACGDYHSVAVTREGAVFAWGAADCV----------------GDGSGLCRFAPVRLS 265
Query: 165 --APPSDKRAGEEVVKRRKTSSAREESENPAS-GDEFF-----TLSPCLVTLNPGVKITK 216
A P D A + R + ++A ES G+ FF T V P + +
Sbjct: 266 LGASPGD--ACRVIAARFQQTAAVSESGRLLVWGETFFADFHATPEVLCVFFRP---VVQ 320
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI---------PCLEHAAS 267
VA G L+L+D GQV+GWG G G+L + K +P P ++ P +E A
Sbjct: 321 VAIGKHFGLVLTDDGQVYGWGDGTYGELSPMA-PKTLPEPLILKDSSGQSLPPVVEIATG 379
Query: 268 GKDRPLLVRQGSV-----NSSGKAG-------------------RSYVKEIACGGRHSAV 303
+ LL + N +G+ G RS +IACG RHSA
Sbjct: 380 TRHAILLTHDMRLWALGDNLAGQCGVPGHQTRLSVPKMVKLGELRSRASKIACGYRHSAC 439
Query: 304 VTDAGALLTFGWG 316
+T L + WG
Sbjct: 440 ITPNNQL--YLWG 450
>gi|432862269|ref|XP_004069771.1| PREDICTED: RCC1 domain-containing protein 1-like [Oryzias latipes]
Length = 385
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 5/115 (4%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLIP----CLEHA 265
G+K++ V+AGG H++ +SD G ++ WG+ GQLGL S R++ +++
Sbjct: 212 GMKMSSVSAGGWHSVCISDAGDLYVWGWNESGQLGLPSQRLRKTSEKKTDQQEGELSQNS 271
Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
++ ++ + Q VK ++CG RH+A VT +G L T+GWG YGQ
Sbjct: 272 STHQEEVFISIQAFPALFDVTPLCEVKTVSCGSRHTAAVTTSGDLYTWGWGEYGQ 326
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 36/197 (18%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVK 108
K + GG L T+ +G + TWG S+ G G PE P EA +
Sbjct: 164 KSLALGGEHVILLTA-TGAVYTWGQG-----SHGQLGHGGLLPEEEPRTVEALWGMKMSS 217
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
+AG H V +++AG++Y WGW E Q LP+++ +
Sbjct: 218 VSAGGWHSVCISDAGDLYVWGWNE----------------------SGQLGLPSQRLRKT 255
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
++ ++ +S+ + E S F P L + P ++ V+ G RHT ++
Sbjct: 256 SEKKTDQQEGELSQNSSTHQEEVFISIQAF----PALFDVTPLCEVKTVSCGSRHTAAVT 311
Query: 229 DMGQVWGWGYGGEGQLG 245
G ++ WG+G GQLG
Sbjct: 312 TSGDLYTWGWGEYGQLG 328
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 31/128 (24%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P +L+P ++ +A GG H ++L+ G V+ WG G GQLG G L+P
Sbjct: 152 PFFHSLSPHMQAKSLALGGEHVILLTATGAVYTWGQGSHGQLGHGG---------LLPEE 202
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW------G 316
E R + G SS ++ GG HS ++DAG L +GW G
Sbjct: 203 E------PRTVEALWGMKMSS----------VSAGGWHSVCISDAGDLYVWGWNESGQLG 246
Query: 317 LYGQRMAK 324
L QR+ K
Sbjct: 247 LPSQRLRK 254
>gi|294874340|ref|XP_002766907.1| Secretion-regulating guanine nucleotide exchange factor, putative
[Perkinsus marinus ATCC 50983]
gi|239868282|gb|EEQ99624.1| Secretion-regulating guanine nucleotide exchange factor, putative
[Perkinsus marinus ATCC 50983]
Length = 577
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 121/287 (42%), Gaps = 44/287 (15%)
Query: 19 ETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSA 78
++ V+ WG +P T + S L + L G G ALA +E GK+++WG
Sbjct: 169 DSRVFAWGRMPWTGAQASQGLEDV---LSLARKRIRSVAIGAGHALALTEGGKVMSWG-L 224
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+D GQ + PE LP++ + K A G + V+VT+AG+++TWG + +
Sbjct: 225 NDSGQLGTGDERSRIIPETVKLPSDVYIDKIACGPDYSVAVTKAGQLWTWGRYQASNWPR 284
Query: 139 VTRD--------------FGSAGS-FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
+ D G AGS K S G Q L + E V +
Sbjct: 285 LFVDTWCNGNKPGCDNTAVGLAGSRILKVSCGDQHMLALTK---------EGEVFSWGYN 335
Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
+ D P V P KI+ +AAGG H++ + D G V+ WG +GQ
Sbjct: 336 DFGQLGWGLHGVDVVGQQRPHKVPHLP--KISDIAAGGGHSVAVGDDGAVYSWGSNSQGQ 393
Query: 244 LGLG--------SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
+G G +R++M P P ++ +GK LLV + NS
Sbjct: 394 IGHGLRQDFAEATRVQM-PQP-----VKAVTAGKVTTLLVCDDADNS 434
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 29/113 (25%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMV--PTPHLIPCLEHAAS 267
G +I KV+ G +H L L+ G+V+ WGY GQLG G + +V PH +P L
Sbjct: 307 GSRILKVSCGDQHMLALTKEGEVFSWGYNDFGQLGWGLHGVDVVGQQRPHKVPHLPK--- 363
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +IA GG HS V D GA+ ++G GQ
Sbjct: 364 -----------------------ISDIAAGGGHSVAVGDDGAVYSWGSNSQGQ 393
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 19/134 (14%)
Query: 187 EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
+S +GDE + P V L V I K+A G +++ ++ GQ+W WG
Sbjct: 225 NDSGQLGTGDERSRIIPETVKLPSDVYIDKIACGPDYSVAVTKAGQLWTWG--------- 275
Query: 247 GSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
R + P L ++ +G + G N++ S + +++CG +H +T
Sbjct: 276 --RYQASNWPRLF--VDTWCNGN------KPGCDNTAVGLAGSRILKVSCGDQHMLALTK 325
Query: 307 AGALLTFGWGLYGQ 320
G + ++G+ +GQ
Sbjct: 326 EGEVFSWGYNDFGQ 339
>gi|428178434|gb|EKX47309.1| hypothetical protein GUITHDRAFT_137494 [Guillardia theta CCMP2712]
Length = 432
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 117/279 (41%), Gaps = 54/279 (19%)
Query: 48 GGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQ--SYLTSGKHGETPEPFPLPTEAS 105
G +S DV G LA S+ GKL WGS + GQ + T+ K P+ L +A
Sbjct: 152 GTESIADVAAG-FWHTLAASKKGKLYAWGS-NKHGQLGHHDTAVKLAVEPQEILLLRDAP 209
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST------GKQSA 159
+ + A G H +++T+ GEVYTWG FG+ G ST + A
Sbjct: 210 IKQVACGSYHSMALTKDGEVYTWG-------------FGAHGRLGHGSTEDEFMPKRVEA 256
Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSS-----AREESENPASGDEFFTLSPCLVTLNPGVKI 214
L E S AG E TS GD+ L+P V L+ I
Sbjct: 257 LVGENI--SSIHAGFEYSSAVSTSGKVFVWGYGHFYVLGQGDKKDQLAP--VVLDFPTSI 312
Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLL 274
++A G H +S G ++ WG+ G LG G + +P++I LE + D P
Sbjct: 313 RQLAFGSFHAAAVSHSGMLFTWGHATHGPLGHG-----LKSPNII--LE--PTVLDAPAQ 363
Query: 275 VRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
++ K++ACG +H+ VVT G + +F
Sbjct: 364 LQNS-------------KQVACGSQHTLVVTGTGDVFSF 389
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 25/108 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG-LGSRIKMVPTPHLIPCLEHAASGKDRP 272
I VAAG HTL S G+++ WG GQLG + +K+ P I L +D P
Sbjct: 156 IADVAAGFWHTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLL------RDAP 209
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+K++ACG HS +T G + T+G+G +G+
Sbjct: 210 ------------------IKQVACGSYHSMALTKDGEVYTWGFGAHGR 239
>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
niloticus]
Length = 1004
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 114/304 (37%), Gaps = 57/304 (18%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTS 88
G EK+P+ P + G K+V CGG L G + T GS + GQ L
Sbjct: 13 GIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLM--HDGSVYTCGS-NSCGQ--LGH 67
Query: 89 GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS 148
K G +PE + + G H ++V E G+++ WG G G
Sbjct: 68 DKAGISPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGA-------------GDGGQ 114
Query: 149 FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-----NPASGD------E 197
+T +P D R + + + + + + SG E
Sbjct: 115 LGLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKGE 174
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
L P + G+ + ++ AGG H+ LS G V+GWG GQLGL +
Sbjct: 175 PSKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDK-----QDR 229
Query: 258 LIPC-LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
+PC ++ S K V I+CG H+A +T G L TFG G
Sbjct: 230 AVPCHIKFLRSQK---------------------VVYISCGDEHTAALTKDGGLFTFGDG 268
Query: 317 LYGQ 320
+GQ
Sbjct: 269 SWGQ 272
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 98/263 (37%), Gaps = 29/263 (11%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G G ++A +E G+L WG+ D T+ P + + + G HCV+
Sbjct: 91 GRGHSMAVNEQGQLFAWGAGDGGQLGLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVA 150
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
++ G+++TWG S ++ G + +P Q + +
Sbjct: 151 LSRDGQLFTWGQN---TSGQLGLGKGEPSKLFPHPLKSLAGIPLAQITAGGDHSFALSLS 207
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
+ + D+ PC + K+ ++ G HT L+ G ++ +G
Sbjct: 208 GAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRSQKVVYISCGDEHTAALTKDGGLFTFGD 267
Query: 239 GGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
G GQLG GS L+P R +L G + V +IACG
Sbjct: 268 GSWGQLGHGS-----TNSELLP----------RRVLELMG----------TEVSQIACGR 302
Query: 299 RHS-AVVTDAGALLTFGWGLYGQ 320
H+ A V +G + FG +GQ
Sbjct: 303 HHTLAFVPSSGVVYAFGCNSHGQ 325
>gi|26353276|dbj|BAC40268.1| unnamed protein product [Mus musculus]
Length = 531
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 120/321 (37%), Gaps = 89/321 (27%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L T+E G + WG G S L +G + P + T V++ A G H +++
Sbjct: 87 VLLTTEDGVVYAWGH---NGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GE++ WG+ C G GS ST Q P+ ++
Sbjct: 144 AADGELFAWGYNNC----------GQVGS---GSTANQ---------PTPRK-------- 173
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
++ CL T ++ +A G ++ + D G+V+GWGY
Sbjct: 174 ---------------------ITNCLHT----KRVVNIACGQTSSMAVLDSGEVYGWGYN 208
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G GQLGLG+ + TP VR +++ V +I CG
Sbjct: 209 GNGQLGLGNNGNQL-TP------------------VRVAALHGMC------VNQIVCGYA 243
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
H+ +TD G L +G YGQ
Sbjct: 244 HTLALTDEGLLYAWGANTYGQ 264
>gi|387015158|gb|AFJ49698.1| Regulator of chromosome condensation-like [Crotalus adamanteus]
Length = 424
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 121/303 (39%), Gaps = 63/303 (20%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQS 84
G P K P L +P ++ ++ GG + SE+GK+ T+G +DEG
Sbjct: 43 LGLGPDVLARKRPALLQLPEKIIQAEA------GGV-HTVCLSETGKIYTFG-CNDEGAL 94
Query: 85 YLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
+ + G P + + VV+ +AG +H ++TE G V+ WG
Sbjct: 95 GRDTSEEGSDAVPGLVDLKEKVVQVSAGDSHTAALTEDGHVFIWG--------------- 139
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPC 204
+F +D G L ++ EE+ SG F P
Sbjct: 140 ---AF-RDENGVIGLLAPQKG---------------------EENSQSTSGSLF----P- 169
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
V L V + K+A+G H ++S G ++ G G GQLG VP I +
Sbjct: 170 -VELQLDVPVVKIASGSHHLALVSSTGNLYTCGCGDNGQLG------RVPQ---IFVVRG 219
Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQRMAK 324
G +R LL + ++ G + ++++ CG + +T G ++ FG Y Q ++
Sbjct: 220 GRRGLERLLLPQVVTIKQRGCKTKGNIRDVFCGSYSTIAITQEGHVVGFGLSNYYQLGSQ 279
Query: 325 CLA 327
+A
Sbjct: 280 EIA 282
>gi|444731984|gb|ELW72311.1| RCC1 and BTB domain-containing protein 1 [Tupaia chinensis]
Length = 531
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 116/321 (36%), Gaps = 89/321 (27%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEV+ WG+ C G GS ST Q P K +KR
Sbjct: 144 AADGEVFAWGYNNC----------GQVGS---GSTANQ--------PTPRKVTNCLHIKR 182
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+ +A G ++ + D G+V+GWGY
Sbjct: 183 ----------------------------------VVGIACGQTSSMAVLDNGEVYGWGYN 208
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G GQLGLG+ + TP VR +++S V +I CG
Sbjct: 209 GNGQLGLGNNGNQL-TP------------------VRVAALHSVC------VNQIVCGYA 243
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
H+ +TD G L +G YGQ
Sbjct: 244 HTLALTDEGLLYAWGANTYGQ 264
>gi|431913810|gb|ELK15239.1| RCC1 and BTB domain-containing protein 1 [Pteropus alecto]
Length = 531
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 119/321 (37%), Gaps = 89/321 (27%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GNSANEALYVTDNDEVFVFGMNYSNCLGTGDSQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEV+ WG+ C G GS ST Q PT R
Sbjct: 144 AADGEVFAWGYNNC----------GQVGS---GSTANQ---PT---------------PR 172
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+ T+ + K+ +A G ++ + D G+V+GWGY
Sbjct: 173 KVTNCLHIK------------------------KVVGIACGQTSSMAVLDNGEVYGWGYN 208
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G GQLGLG+ + TP VR +++S V +I CG
Sbjct: 209 GNGQLGLGNNGNQL-TP------------------VRVAALHSVC------VNQIVCGYA 243
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
H+ +TD G L +G YGQ
Sbjct: 244 HTLALTDEGLLYAWGANTYGQ 264
>gi|289666776|ref|NP_775621.2| RCC1 domain-containing protein 1 [Mus musculus]
gi|190360158|sp|Q8BTU7.2|RCCD1_MOUSE RecName: Full=RCC1 domain-containing protein 1
Length = 377
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 11/131 (8%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+++ KVAAGG H++ LS+ G ++ WG+ GQL L +R
Sbjct: 202 LEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREE 261
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI-----------ACGGRHSAVVTDAGA 309
E G L V + A + + + +CG RH+AVVT G
Sbjct: 262 ATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGE 321
Query: 310 LLTFGWGLYGQ 320
L T+GWG YGQ
Sbjct: 322 LYTWGWGKYGQ 332
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 79/201 (39%), Gaps = 49/201 (24%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G L +G++ +WG+ G+HG+ E P EA + K
Sbjct: 169 GAEHVLLLCAAGQVFSWGA-----------GRHGQLGHGTLEAELEPRLLEALQGLRMAK 217
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V ++E G++Y WGW E Q ALPT +
Sbjct: 218 VAAGGWHSVCLSETGDIYIWGWNE----------------------SGQLALPTRSG--T 253
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGD--EFFTLSP--CLVTLNPGVKITKVAAGGRHT 224
+ +A E +EE +G F + P L+ L G + G RHT
Sbjct: 254 ENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHT 313
Query: 225 LILSDMGQVWGWGYGGEGQLG 245
+++ G+++ WG+G GQLG
Sbjct: 314 AVVTRTGELYTWGWGKYGQLG 334
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 97/253 (38%), Gaps = 42/253 (16%)
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
Q+ + H P PL + + +AGW++ VT G V G +A RD
Sbjct: 19 QALGSGNSHHSVYSPEPLHASDDICQVSAGWSYTALVTRGGRVELSG--SVSGAADGCRD 76
Query: 143 FGSAGSFQKDSTGKQSALPTEQA-PPSDKRAGEEVVKRRKTSSAREESENPASGDE---F 198
++ K + QA P GE + + S A+ + E+ S +
Sbjct: 77 VWASEELLVLLRNKGGSSTEVQAWVPGSALQGEPLWVQNLVSGAKGQGEDEPSRESRMGT 136
Query: 199 FTLSPC---LVT--------LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
L PC VT L P +++ ++ G H L+L GQV+ WG G GQLG G
Sbjct: 137 LPLLPCARAYVTPEPPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHG 196
Query: 248 SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA 307
+ ++ P L+ L+ K +A GG HS +++
Sbjct: 197 T-LEAELEPRLLEALQGLRMAK------------------------VAAGGWHSVCLSET 231
Query: 308 GALLTFGWGLYGQ 320
G + +GW GQ
Sbjct: 232 GDIYIWGWNESGQ 244
>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
member 6 [Xenopus laevis]
gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
Length = 1028
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 30/138 (21%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAA 266
KI +++ G H++ L++ G+V+ WG GQLGLGS+I TP L IP ++ A
Sbjct: 138 KIIQISCGNFHSVALAEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTA 197
Query: 267 SGKDRPLLVRQGSV-----NSSGKAG----------RSY---------VKEIACGGRHSA 302
G L G+V N++G+ G + Y V I+CG H+A
Sbjct: 198 GGSQTFALSMSGTVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHTA 257
Query: 303 VVTDAGALLTFGWGLYGQ 320
V+ G + TFG YGQ
Sbjct: 258 VLNKDGIVYTFGDDTYGQ 275
Score = 44.7 bits (104), Expect = 0.065, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 24/107 (22%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
I V+ G H++ + D G ++ WG G EGQLG G TP I
Sbjct: 86 IVDVSCGTNHSVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFTPKRI-------------- 131
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+G R + +I+CG HS + + G + ++G GQ
Sbjct: 132 ---------TGLLNRKII-QISCGNFHSVALAEDGRVFSWGQNKCGQ 168
>gi|350407907|ref|XP_003488238.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
impatiens]
Length = 539
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 124/340 (36%), Gaps = 99/340 (29%)
Query: 8 REENEKMEECKETVVY-----MWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
+ NE + K+ +VY +G L GT +S I LCG S K G
Sbjct: 34 KAANETLLVTKDDMVYGIGNNTYGCL-GTGDTQSTIYPKKIEALCG-KSVKTFAYGKGPH 91
Query: 63 ALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFP-LPTEASVVKAAAGWAHCVSV 119
LA +E GK+ +WG D + G S G TP P + + VV A G H +++
Sbjct: 92 VLALTEEGKVYSWGYNDYCELGNK---STNEGLTPTLVPSVLDDKFVVDIACGGHHSLAL 148
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
T GE+Y WG S +V G + L T Q P G
Sbjct: 149 TNKGEIYAWGHN---VSGQV---------------GCGTILSTVQPIPKLLNVG------ 184
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
LN G K+ ++ G ++ ++D G+V+ WG+
Sbjct: 185 ----------------------------LN-GKKVVHISCGDSSSVAVTDSGEVYSWGHN 215
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G GQLGLG+ C K + ++++ CG
Sbjct: 216 GVGQLGLGN------------CTSQVEPQK-------------VATFAKIVIEKVVCGYM 250
Query: 300 HSAVVTDAGALLTFGWGLYGQRMAKCLAGDGINMGSWVWV 339
H+ ++D G L +G YGQ G+N S VW+
Sbjct: 251 HTLALSDEGVLYVWGANSYGQL--------GLNTDSNVWI 282
>gi|326481150|gb|EGE05160.1| ran exchange factor Prp20/Pim1 [Trichophyton equinum CBS 127.97]
Length = 540
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 96/247 (38%), Gaps = 59/247 (23%)
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
P + VV+ AAG HCV++T G V TWG + G+ +D+T +
Sbjct: 155 PEDVGVVQVAAGGMHCVALTHDGRVLTWGVND-------------QGALGRDTTWEGGLK 201
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
+ A K + E + D F G I +VAAG
Sbjct: 202 DIDDA----KSDTSSDSGSDSGLNPYESTPTAIPSDAF----------PEGTVIVQVAAG 247
Query: 221 GRHTLILSDMGQVWGWG--YGGEGQLGLGSRIKMVPTPHLIPCLE---HAASGKDRPLLV 275
+ L+D G V+GWG G EG +G + K+ PTP LI L+ H A G + L +
Sbjct: 248 DSSSFALTDDGLVYGWGTFRGNEGIIGFDAETKIQPTPKLISGLKKITHVACGDNHALAI 307
Query: 276 -RQGSV-----NSSGKAGRSYVK-------------------EIACGGRHSAVVTDAGAL 310
+G+V + GR V+ + CG HS V +G +
Sbjct: 308 DNRGAVFAWGSGQQNQLGRRIVERNKLNGLQPREFGLPKNITHVGCGSFHSFAVHKSGKV 367
Query: 311 LTFGWGL 317
+GWGL
Sbjct: 368 --YGWGL 372
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 14/118 (11%)
Query: 21 VVYMWGYLPGTSP----EKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLIT 74
+VY WG G + + P P + G K + CG ALA G +
Sbjct: 259 LVYGWGTFRGNEGIIGFDAETKIQPTPKLISG---LKKITHVACGDNHALAIDNRGAVFA 315
Query: 75 WGSADDE--GQSYLTSGK-HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
WGS G+ + K +G P F LP ++ G H +V ++G+VY WG
Sbjct: 316 WGSGQQNQLGRRIVERNKLNGLQPREFGLPK--NITHVGCGSFHSFAVHKSGKVYGWG 371
>gi|426344976|ref|XP_004039179.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Gorilla gorilla gorilla]
Length = 1016
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 61/121 (50%), Gaps = 25/121 (20%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T +P +V GV + +++AG H++ LS G ++ WG GQLGLG
Sbjct: 179 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLG------------ 226
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
H S KD P L+ +G N V+ +ACGG HSA++T G L TFG G +G
Sbjct: 227 ----HTES-KDYPSLI-EGLDNQK-------VEFVACGGSHSALLTQDGLLFTFGAGKHG 273
Query: 320 Q 320
Q
Sbjct: 274 Q 274
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 100/231 (43%), Gaps = 54/231 (23%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKH---GETPEPFPLPTEASVV 107
K + CG +LA S+ G+L WG + GQ L G+ TP+ +
Sbjct: 138 KKIIQITCGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRKFPSTTTPQIVEHLAGVPLA 194
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST------------- 154
+ +AG AH ++++ +G +Y+WG E FG G +S
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNE----------FGQLGLGHTESKDYPSLIEGLDNQK 244
Query: 155 -------GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVT 207
G SAL T+ AG K + ++E L PCLV
Sbjct: 245 VEFVACGGSHSALLTQDGLLFTFGAG----KHGQLGHNSTQNE----------LRPCLVA 290
Query: 208 LNPGVKITKVAAGGRHTL-ILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTP 256
G ++T++A G HTL +SD+G+V+ +G G +GQLG G+R +++P P
Sbjct: 291 ELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLP 341
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 89/230 (38%), Gaps = 51/230 (22%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
E +++ G H +++++ GE++ WG + V R F S +T Q
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWG-QNLHGQLGVGRKFPS-------TTTPQIVEHL 188
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPAS--GDEFFTL---------SPCLVTLNPG 211
P + AGE S A S N S +EF L P L+
Sbjct: 189 AGVPLAQISAGE------AHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDN 242
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
K+ VA GG H+ +L+ G ++ +G G GQLG S L PCL G
Sbjct: 243 QKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNS-----TQNELRPCLVAELVGYR- 296
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQ 320
V +IACG H+ A V+D G + +FG G GQ
Sbjct: 297 -------------------VTQIACGRWHTLAYVSDLGKVFSFGSGKDGQ 327
>gi|194221881|ref|XP_001489975.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Equus
caballus]
Length = 531
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 116/321 (36%), Gaps = 89/321 (27%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLIPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEV+ WG+ C G GS ST Q P K +KR
Sbjct: 144 AADGEVFAWGYNNC----------GQVGS---GSTANQ--------PTPRKVTNCLHIKR 182
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+ +A G ++ + D G+V+GWGY
Sbjct: 183 ----------------------------------VVGIACGQTSSMAVLDNGEVYGWGYN 208
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G GQLGLG+ + TP VR +++S V +I CG
Sbjct: 209 GNGQLGLGNNGNQL-TP------------------VRVAALHSVC------VNQIVCGYA 243
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
H+ +TD G L +G YGQ
Sbjct: 244 HTLALTDEGLLYAWGANTYGQ 264
>gi|26353714|dbj|BAC40487.1| unnamed protein product [Mus musculus]
Length = 377
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 11/131 (8%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+++ KVAAGG H++ LS+ G ++ WG+ GQL L +R
Sbjct: 202 LEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREE 261
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI-----------ACGGRHSAVVTDAGA 309
E G L V + A + + + +CG RH+AVVT G
Sbjct: 262 ATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGE 321
Query: 310 LLTFGWGLYGQ 320
L T+GWG YGQ
Sbjct: 322 LYTWGWGKYGQ 332
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 79/201 (39%), Gaps = 49/201 (24%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G L +G++ +WG+ G+HG+ E P EA + K
Sbjct: 169 GAEHVLLLCAAGQVFSWGA-----------GRHGQLGHGTLEAELEPRLLEALQGLRMAK 217
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V ++E G++Y WGW E Q ALPT +
Sbjct: 218 VAAGGWHSVCLSETGDIYIWGWNE----------------------SGQLALPTRSG--T 253
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGD--EFFTLSP--CLVTLNPGVKITKVAAGGRHT 224
+ +A E +EE +G F + P L+ L G + G RHT
Sbjct: 254 ENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHT 313
Query: 225 LILSDMGQVWGWGYGGEGQLG 245
+++ G+++ WG+G GQLG
Sbjct: 314 AVVTRTGELYTWGWGKYGQLG 334
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 97/253 (38%), Gaps = 42/253 (16%)
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
Q+ + H P PL + + +AGW++ VT G V G +A RD
Sbjct: 19 QALGSGNSHHSLYSPEPLHASDDICQVSAGWSYTALVTRGGRVELSG--SVSGAADGCRD 76
Query: 143 FGSAGSFQKDSTGKQSALPTEQA-PPSDKRAGEEVVKRRKTSSAREESENPASGDE---F 198
++ K + QA P GE + + S A+ + E+ S +
Sbjct: 77 VWASEELLVLLRNKGGSSTEVQAWVPGSALQGEPLWVQNLVSGAKGQGEDEPSRESRMGT 136
Query: 199 FTLSPC---LVT--------LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
L PC VT L P +++ ++ G H L+L GQV+ WG G GQLG G
Sbjct: 137 LPLLPCARAYVTPEPPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHG 196
Query: 248 SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA 307
+ ++ P L+ L+ K +A GG HS +++
Sbjct: 197 T-LEAELEPRLLEALQGLRMAK------------------------VAAGGWHSVCLSET 231
Query: 308 GALLTFGWGLYGQ 320
G + +GW GQ
Sbjct: 232 GDIYIWGWNESGQ 244
>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pongo abelii]
Length = 979
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 118/302 (39%), Gaps = 61/302 (20%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
++ +L P + +DV GCG + + G + T G +D GQ L K
Sbjct: 18 DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW-----------RECVPSAKVT 140
+ PE ++V + G AH +++ + G+VY WG EC+ +V
Sbjct: 72 RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECI---RVP 128
Query: 141 RDFGSAGSFQ--KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
R+ S Q + + G +L +A + + + ++++
Sbjct: 129 RNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQT--------- 179
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
SP L+ G+ +VAAGG H+ +L+ G ++GWG GQLGL P+L
Sbjct: 180 ---SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNL 235
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ L + I CG H+A +T G + TFG G Y
Sbjct: 236 LKSLRSQK------------------------IVYICCGEDHTAALTKEGGVFTFGAGGY 271
Query: 319 GQ 320
GQ
Sbjct: 272 GQ 273
>gi|332819950|ref|XP_003310459.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Pan troglodytes]
Length = 957
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 61/121 (50%), Gaps = 25/121 (20%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T +P +V GV + +++AG H++ LS G ++ WG GQLGLG
Sbjct: 112 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLG------------ 159
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
H S KD P L+ +G N V+ +ACGG HSA++T G L TFG G +G
Sbjct: 160 ----HTES-KDYPSLI-EGLDNQK-------VEFVACGGSHSALLTQDGLLFTFGAGKHG 206
Query: 320 Q 320
Q
Sbjct: 207 Q 207
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 52/217 (23%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKH---GETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
A + SG+L WG + GQ L G+ TP+ + + +AG AH ++++
Sbjct: 85 ARTPSGELFAWGQ-NLHGQ--LGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSM 141
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST--------------------GKQSALP 161
+G +Y+WG E FG G +S G SAL
Sbjct: 142 SGNIYSWGKNE----------FGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGSHSALL 191
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
T+ AG K + ++E L PCLV ++T++A G
Sbjct: 192 TQDGLLFTFGAG----KHGQLGHNSTQNE----------LRPCLVAELVEYRVTQIACGR 237
Query: 222 RHTL-ILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTP 256
HTL +SD+G+V+ +G G +GQLG G+R +++P P
Sbjct: 238 WHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLP 274
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 26/119 (21%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L+ K+ VA GG H+ +L+ G ++ +G G GQLG
Sbjct: 167 PSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLG----------------- 209
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQ 320
++ + RP LV + V +IACG H+ A V+D G + +FG G GQ
Sbjct: 210 HNSTQNELRPCLV--------AELVEYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQ 260
>gi|426236339|ref|XP_004012127.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Ovis aries]
Length = 531
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 116/321 (36%), Gaps = 89/321 (27%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLDALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEV+ WG+ C G GS ST Q P K +KR
Sbjct: 144 AADGEVFAWGYNNC----------GQVGS---GSTANQ--------PTPRKVTNCLHIKR 182
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+ +A G ++ + D G+V+GWGY
Sbjct: 183 ----------------------------------VVGIACGQTSSMAVLDNGEVYGWGYN 208
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G GQLGLG+ + TP VR +++S V +I CG
Sbjct: 209 GNGQLGLGNNGNQL-TP------------------VRVAALHSVC------VNQIVCGYA 243
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
H+ +TD G L +G YGQ
Sbjct: 244 HTLALTDEGLLYAWGANTYGQ 264
>gi|281207411|gb|EFA81594.1| hypothetical protein PPL_05585 [Polysphondylium pallidum PN500]
Length = 624
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 107/296 (36%), Gaps = 58/296 (19%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWA 114
G + S+ G+L ++G ++ G E P P P +V AAG
Sbjct: 199 GSQHSFVLSKFGELFSFGCG-----TFGRLGHGNELPSFNPRPISTLVGKHIVSVAAGLM 253
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H +V G +YTWGW +G G T K+ LP + +
Sbjct: 254 HSAAVDSQGALYTWGWNR----------YGQLGL----GTVKKHTLPNKNKELERFNIVK 299
Query: 175 EVVKRRKT----------SSAREESENPASGDEFFTLSPCLVTLN--PGVKITKVAAGGR 222
V + T S G ++ P + L+ +I +AAG
Sbjct: 300 VVCGKNHTLVLDVNGHVYSFGFNVCGQLGIGSYTDSIKPNRIDLDLKQNDEIIDIAAGYY 359
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC--LEHAASGKDRPLLVRQGSV 280
H L+L+ G V+ +GY +G LGLG + P L+P H + G
Sbjct: 360 HVLLLTKKGCVYSFGYISDGALGLGDVVGHQSRPKLMPFSHFNHEFNDSIDSYKEIYGEY 419
Query: 281 NSS--------------------GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
NS + G VK IA GG HSA++T +G L TFG G
Sbjct: 420 NSDSENDINNNNAKLPPKVVELHNEIGDVAVK-IAAGGWHSAIITSSGRLYTFGLG 474
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 25/104 (24%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
VAAG +H+ +LS G+++ +G G G+LG G+ + P P RP+
Sbjct: 196 VAAGSQHSFVLSKFGELFSFGCGTFGRLGHGNEL-----PSFNP----------RPISTL 240
Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G ++ +A G HSA V GAL T+GW YGQ
Sbjct: 241 VG----------KHIVSVAAGLMHSAAVDSQGALYTWGWNRYGQ 274
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 25/126 (19%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G+E + +P ++ G I VAAG H+ + G ++ WG+ GQLGLG+ K
Sbjct: 226 GNELPSFNPRPISTLVGKHIVSVAAGLMHSAAVDSQGALYTWGWNRYGQLGLGTVKK--- 282
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
H +P N + + R + ++ CG H+ V+ G + +FG
Sbjct: 283 --HTLP--------------------NKNKELERFNIVKVVCGKNHTLVLDVNGHVYSFG 320
Query: 315 WGLYGQ 320
+ + GQ
Sbjct: 321 FNVCGQ 326
>gi|307110133|gb|EFN58370.1| hypothetical protein CHLNCDRAFT_20698, partial [Chlorella
variabilis]
Length = 379
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 108/268 (40%), Gaps = 46/268 (17%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LA ++G+ WG ++ GQ + + P +V + AAG H +++TE G
Sbjct: 97 LALDDTGQCWAWG-GNEYGQCLPRDKR--DILAPVKCLEGIAVKQVAAGGMHSLALTETG 153
Query: 124 EVYTWG--WRE-CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
E++ WG W + + + R + G F S G L A
Sbjct: 154 EIWMWGEPWGDFSMTINRAPRRIDTTGDFVDVSCGAFHNLALNAAGEC------------ 201
Query: 181 KTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
+ + +G + P V GV I V+AGG H++ +S G+V+ WG G
Sbjct: 202 -FTWGINDFGMLGNGTTSYATCPEKVVGLEGVFIADVSAGGWHSMAISAEGEVYVWGRGE 260
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
G+LGLG R S K RP V+ + V E +CGG H
Sbjct: 261 YGRLGLGDR---------------TGSSKLRPQKVKTLEGHR--------VVEGSCGGTH 297
Query: 301 SAVVTDAGALLTFGWGLYGQRMAKCLAG 328
+ VVTD G +G G +G +C+ G
Sbjct: 298 TMVVTDEGRCFIWGRGAFG----RCVGG 321
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 48/117 (41%), Gaps = 31/117 (26%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ-LGLGSRIKMVPTPHLIPCLEHAASGK 269
GV I + A GG H L L D GQ W WG GQ L R + P + CLE A
Sbjct: 83 GVHIKQAAIGGWHVLALDDTGQCWAWGGNEYGQCLPRDKRDILAP----VKCLEGIA--- 135
Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG--WGLYGQRMAK 324
VK++A GG HS +T+ G + +G WG + + +
Sbjct: 136 ---------------------VKQVAAGGMHSLALTETGEIWMWGEPWGDFSMTINR 171
>gi|326470311|gb|EGD94320.1| ran exchange factor Prp20/Pim1 [Trichophyton tonsurans CBS 112818]
Length = 565
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 96/247 (38%), Gaps = 59/247 (23%)
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
P + VV+ AAG HCV++T G V TWG + G+ +D+T +
Sbjct: 180 PEDVGVVQVAAGGMHCVALTHDGRVLTWGVND-------------QGALGRDTTWEGGLK 226
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
+ A K + E + D F G I +VAAG
Sbjct: 227 DIDDA----KSDTSSDSGSDSGLNPYESTPTAIPSDAF----------PEGTVIVQVAAG 272
Query: 221 GRHTLILSDMGQVWGWG--YGGEGQLGLGSRIKMVPTPHLIPCLE---HAASGKDRPLLV 275
+ L+D G V+GWG G EG +G + K+ PTP LI L+ H A G + L +
Sbjct: 273 DSSSFALTDDGLVYGWGTFRGNEGIIGFDAETKIQPTPKLISGLKKITHVACGDNHALAI 332
Query: 276 -RQGSV-----NSSGKAGRSYVK-------------------EIACGGRHSAVVTDAGAL 310
+G+V + GR V+ + CG HS V +G +
Sbjct: 333 DNRGAVFAWGSGQQNQLGRRIVERNKLNGLQPREFGLPKNITHVGCGSFHSFAVHKSGKV 392
Query: 311 LTFGWGL 317
+GWGL
Sbjct: 393 --YGWGL 397
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 95/262 (36%), Gaps = 51/262 (19%)
Query: 21 VVYMWGYLPGTSP----EKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLIT 74
+VY WG G + + P P + G K + CG ALA G +
Sbjct: 284 LVYGWGTFRGNEGIIGFDAETKIQPTPKLISG---LKKITHVACGDNHALAIDNRGAVFA 340
Query: 75 WGSADDE--GQSYLTSGK-HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
WGS G+ + K +G P F LP ++ G H +V ++G+VY WG
Sbjct: 341 WGSGQQNQLGRRIVERNKLNGLQPREFGLPK--NITHVGCGSFHSFAVHKSGKVYGWGLN 398
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSAL--PTEQAPPSDKRAGEEVVKRRKTSSAREES 189
+ Q+ + ++ + PT DK ++ + AR
Sbjct: 399 SYCETG-----------IQQGAGDDEAVILHPTVVDSLKDKNV-VQICGGSHHTLARTTD 446
Query: 190 ---------ENPASGDEFFTLSPCLV--------------TLNPGVKITKVAAGGRHTLI 226
+ SG + TLS V T PG K VAAG H++
Sbjct: 447 GDCLVWGRLDGFQSGLKVDTLSDSAVIKDDRNRARVLFEPTAVPGFKAEYVAAGADHSIA 506
Query: 227 LSDMGQVWGWGYGGEGQLGLGS 248
+ + G+ W WG+ Q G G+
Sbjct: 507 IDNEGRAWTWGFSANYQTGQGT 528
>gi|326914164|ref|XP_003203397.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Meleagris
gallopavo]
Length = 567
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 96/237 (40%), Gaps = 38/237 (16%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT +S I LCG G G LAT E G++ TWG S L +G
Sbjct: 96 GTGDVQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEE-GEVYTWGH---NAYSQLGNG 151
Query: 90 KHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
P + T V++ A G H + +T GEVYTWG+ ++
Sbjct: 152 TTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGY-------------NNS 198
Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP-------------- 192
G ST Q +P + + + S A E+
Sbjct: 199 GQVGSGSTANQ-PIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLG 257
Query: 193 ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
+SG++ +PC + G+++ +VA G HTL+L+D GQ++ WG GQLG G++
Sbjct: 258 SSGNQ---PTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNK 311
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC V+ N K+ +VA G H+++L+ G+V+ WGY GQ+G GS P P +
Sbjct: 157 LVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ-PIPRRV 215
Query: 260 -PCLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 216 TSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 275
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 276 VQRVACGCAHTLVLTDEGQIYAWGANSYGQ 305
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 27/129 (20%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T+ P + G KI ++ G G H ++ ++ G+V+ WG+ QLG G+
Sbjct: 97 TGDVQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGT---- 152
Query: 253 VPTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
T H L+PC Q S N K V E+ACG HS V+T G +
Sbjct: 153 --TNHGLVPC---------------QVSTNLVNKK----VIEVACGSHHSMVLTSDGEVY 191
Query: 312 TFGWGLYGQ 320
T+G+ GQ
Sbjct: 192 TWGYNNSGQ 200
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 69/175 (39%), Gaps = 26/175 (14%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S PIP R+ K V CG ++A E+G++ WG
Sbjct: 190 VYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGY- 248
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
G L G G P P + V + A G AH + +T+ G++Y WG
Sbjct: 249 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWG------- 299
Query: 137 AKVTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
A S+ + TG +S + PT D+ TS+A+ +S
Sbjct: 300 ---------ANSYGQLGTGNKSNQSYPTTVTVDKDRVIEIAACHSAHTSAAKTQS 345
>gi|145594515|ref|YP_001158812.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303852|gb|ABP54434.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 554
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 92/259 (35%), Gaps = 82/259 (31%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
++LA +++G + WGS + GQ + TP LP ++ AA + H +++T+
Sbjct: 204 YSLALTDTGAALAWGS-NSRGQLGDGTTTDRSTPVTVSLPAGTTITALAASYDHSLALTD 262
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
G V WG S+ + G+ R
Sbjct: 263 TGAVLAWGSN------------------------------------SNGQLGDGTTTNRS 286
Query: 182 TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
T P V L G IT +AAG HTL+L+ G V WG
Sbjct: 287 T--------------------PVTVGLPAGTTITALAAGRSHTLVLTSAGAVLAWGSNSN 326
Query: 242 GQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
GQLG G+ + P+ V G + + +A G HS
Sbjct: 327 GQLGDGTTTD-----------------RSTPVTV--------GLPAGTTITALAAGYYHS 361
Query: 302 AVVTDAGALLTFGWGLYGQ 320
+TD GA+L +G YGQ
Sbjct: 362 LALTDTGAVLAWGGNSYGQ 380
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 52/119 (43%), Gaps = 25/119 (21%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P V L G IT +AAGG H+L L+D G V WG GQLG G+
Sbjct: 80 TPVTVGLPAGTTITALAAGGSHSLALTDTGVVLAWGSNSRGQLGDGTTTD---------- 129
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ P+ V G + + +A G RHS +TD GA+L +G GQ
Sbjct: 130 -------RSTPVTV--------GLPAGTTITALAAGRRHSLALTDTGAVLAWGSNSNGQ 173
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 102/265 (38%), Gaps = 52/265 (19%)
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
TP LP ++ AAG +H +++T+ G V WG + G G D
Sbjct: 79 STPVTVGLPAGTTITALAAGGSHSLALTDTGVVLAWG----------SNSRGQLG----D 124
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE--------ESENPASGDEFFTL--S 202
T + P P+ RR + + + + N GD T +
Sbjct: 125 GTTTDRSTPVTVGLPAGTTITALAAGRRHSLALTDTGAVLAWGSNSNGQLGDGTTTARST 184
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPC 261
P V L G IT +AA ++L L+D G WG GQLG G+ + P +P
Sbjct: 185 PVTVGLPAGTTITALAA-STYSLALTDTGAALAWGSNSRGQLGDGTTTDRSTPVTVSLPA 243
Query: 262 ---LEHAASGKDRPL-LVRQGSV-----NSSGKAGR-----------------SYVKEIA 295
+ A+ D L L G+V NS+G+ G + + +A
Sbjct: 244 GTTITALAASYDHSLALTDTGAVLAWGSNSNGQLGDGTTTNRSTPVTVGLPAGTTITALA 303
Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQ 320
G H+ V+T AGA+L +G GQ
Sbjct: 304 AGRSHTLVLTSAGAVLAWGSNSNGQ 328
>gi|395859036|ref|XP_003801852.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Otolemur garnettii]
Length = 531
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 116/321 (36%), Gaps = 89/321 (27%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSASEALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEV+ WG+ C G GS ST Q P K +KR
Sbjct: 144 AADGEVFAWGYNNC----------GQVGS---GSTANQ--------PTPRKVTNCLHIKR 182
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+ +A G ++ + D G+V+GWGY
Sbjct: 183 ----------------------------------VVGIACGQTSSMAVLDNGEVYGWGYN 208
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G GQLGLG+ + TP VR +++S V +I CG
Sbjct: 209 GNGQLGLGNNGNQL-TP------------------VRVAALHSVC------VNQIVCGYA 243
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
H+ +TD G L +G YGQ
Sbjct: 244 HTLALTDEGLLYAWGANTYGQ 264
>gi|148704197|gb|EDL36144.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1, isoform CRA_b [Mus musculus]
Length = 563
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 117/321 (36%), Gaps = 89/321 (27%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 60 GTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 118
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L T+E G + WG G S L +G + P + T V++ A G H +++
Sbjct: 119 VLLTTEDGVVYAWGH---NGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMAL 175
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GE++ WG+ C G GS ST Q P+ ++
Sbjct: 176 AADGELFAWGYNNC----------GQVGS---GSTANQ---------PTPRK-------- 205
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
++ CL T ++ +A G ++ + D G+V+GWGY
Sbjct: 206 ---------------------VTNCLHT----KRVVNIACGQTSSMAVLDSGEVYGWGYN 240
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G GQLGLG+ + TP + L V +I CG
Sbjct: 241 GNGQLGLGNNGNQL-TPVRVAALHGMC------------------------VNQIVCGYA 275
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
H+ +TD G L +G YGQ
Sbjct: 276 HTLALTDEGLLYAWGANTYGQ 296
>gi|403350318|gb|EJY74616.1| hypothetical protein OXYTRI_04126 [Oxytricha trifallax]
gi|403370253|gb|EJY84990.1| hypothetical protein OXYTRI_17158 [Oxytricha trifallax]
Length = 1116
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 66/241 (27%), Positives = 96/241 (39%), Gaps = 74/241 (30%)
Query: 84 SYLTSGKHG----ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKV 139
++ TS K+G TP+ L V+ + GW H V+ G +TWG E
Sbjct: 109 TFQTSPKNGFEYSNTPKLVELLVNYEVISISCGWNHTACVSIDGLSFTWGQYE------- 161
Query: 140 TRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF 199
+G G GK S+ +RR SS ++ P S EFF
Sbjct: 162 ---YGQLG------LGKISSQ-----------------QRRNESSVFQQGIFP-SIVEFF 194
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHL 258
+ +KI VA GG+HTL LS GQV+ G GQLG+G + I+ P
Sbjct: 195 QQN--------NIKIVNVACGGKHTLFLSRNGQVYSMGDNSFGQLGIGMQDIQYKDIPTR 246
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+P L S + +I+ G HSA ++ +G L +G G++
Sbjct: 247 VPSL--------------------------SNITKIS-SGHHSAALSSSGQLFFWGTGVF 279
Query: 319 G 319
G
Sbjct: 280 G 280
Score = 39.7 bits (91), Expect = 2.1, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 18/133 (13%)
Query: 191 NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
+P +G E+ + +P LV L ++ ++ G HT +S G + WG GQLGLG
Sbjct: 113 SPKNGFEY-SNTPKLVELLVNYEVISISCGWNHTACVSIDGLSFTWGQYEYGQLGLGKI- 170
Query: 251 KMVPTPHLIPCLEHAASGKDRPLLVRQG---SVNSSGKAGRSYVKEIACGGRHSAVVTDA 307
+ ++ + +QG S+ + + +ACGG+H+ ++
Sbjct: 171 -------------SSQQRRNESSVFQQGIFPSIVEFFQQNNIKIVNVACGGKHTLFLSRN 217
Query: 308 GALLTFGWGLYGQ 320
G + + G +GQ
Sbjct: 218 GQVYSMGDNSFGQ 230
>gi|298710216|emb|CBJ26291.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1089
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 111/274 (40%), Gaps = 45/274 (16%)
Query: 60 CGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG+ A + G ++ +G+ +GQ + + P+ L + VVK AAG H +
Sbjct: 51 CGYEHTFALTSDGDVLGFGNGV-KGQLGIGNTDSHSNPQRVHLLSGKGVVKMAAGLEHSL 109
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP------TEQAPPSDKR 171
++TE+G++Y +G ++ G +F Q P T+ A D
Sbjct: 110 ALTESGDLYAFG-------DNLSGQLGLGHNFTAKEQTPQKVPPLGRAKITQLACGQDHT 162
Query: 172 A-----GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
A GE + A + + G +P LVT G + ++ G +HT+
Sbjct: 163 AVLTSSGELFMFGNNRDGALGVAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVA 222
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
L+ G V+ WG G GQLG G TP L+ C +PL +
Sbjct: 223 LTAAGGVYCWGENGRGQLGTGDTQNRY-TPSLV-C---------KPLSAFK--------- 262
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ACGG+H+ VTD + FG +GQ
Sbjct: 263 ----CIHVACGGQHTIAVTDCDDVYGFGSDRHGQ 292
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 33/147 (22%)
Query: 200 TLSPCLVT--LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--------R 249
+ PC V L P +I +V G HT L+ G V G+G G +GQLG+G+ R
Sbjct: 30 SFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDVLGFGNGVKGQLGIGNTDSHSNPQR 89
Query: 250 IKMVPTPHLIPC---LEHAASGKDRPLLVRQGSVNSSGK-------------------AG 287
+ ++ ++ LEH+ + + L G N SG+ G
Sbjct: 90 VHLLSGKGVVKMAAGLEHSLALTESGDLYAFGD-NLSGQLGLGHNFTAKEQTPQKVPPLG 148
Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFG 314
R+ + ++ACG H+AV+T +G L FG
Sbjct: 149 RAKITQLACGQDHTAVLTSSGELFMFG 175
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 194 SGDEFFTLSPCLVTLNP--GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
+GD +P LV P K VA GG+HT+ ++D V+G+G GQLGLG R
Sbjct: 242 TGDTQNRYTPSLVC-KPLSAFKCIHVACGGQHTIAVTDCDDVYGFGSDRHGQLGLGRRGV 300
Query: 252 MVPTPHLI 259
+VP P I
Sbjct: 301 IVPVPTRI 308
>gi|169808411|ref|NP_082040.2| RCC1 and BTB domain-containing protein 1 [Mus musculus]
gi|26329171|dbj|BAC28324.1| unnamed protein product [Mus musculus]
gi|148704196|gb|EDL36143.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1, isoform CRA_a [Mus musculus]
Length = 531
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 120/321 (37%), Gaps = 89/321 (27%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L T+E G + WG G S L +G + P + T V++ A G H +++
Sbjct: 87 VLLTTEDGVVYAWGH---NGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GE++ WG+ C G GS ST Q P+ ++
Sbjct: 144 AADGELFAWGYNNC----------GQVGS---GSTANQ---------PTPRK-------- 173
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
++ CL T ++ +A G ++ + D G+V+GWGY
Sbjct: 174 ---------------------VTNCLHT----KRVVNIACGQTSSMAVLDSGEVYGWGYN 208
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G GQLGLG+ + TP VR +++ V +I CG
Sbjct: 209 GNGQLGLGNNGNQL-TP------------------VRVAALHGMC------VNQIVCGYA 243
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
H+ +TD G L +G YGQ
Sbjct: 244 HTLALTDEGLLYAWGANTYGQ 264
>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
porcellus]
Length = 551
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 99/236 (41%), Gaps = 38/236 (16%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL K C G G LAT+E G++ +WG + GQ + HG P
Sbjct: 89 PRRLDSLSDKKIACLSYGSGPHIVLATTE-GEVFSWGH-NAYGQLGNGTINHGLVPSHIS 146
Query: 100 LP-TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS 158
+ V + A G H + +T GEV+ WG+ ++G ST Q
Sbjct: 147 TNLSNKQVTEVACGSYHSLVLTSDGEVFAWGY-------------NNSGQVGSGSTANQ- 192
Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--------------ASGDEFFTLSPC 204
A+P + + + S A ++ +SG++ +PC
Sbjct: 193 AIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ---PTPC 249
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
V G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP ++
Sbjct: 250 RVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVV 305
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 29/149 (19%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L P ++ N K +T+VA G H+L+L+ G+V+ WGY GQ+G GS +
Sbjct: 140 LVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQAIPRRVT 199
Query: 260 PCLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------YV 291
CL+ + A G+ + +V G V N +G+ G V
Sbjct: 200 GCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRV 259
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +ACG H+ V+TD G + +G YGQ
Sbjct: 260 QRVACGYAHTLVLTDEGQVYAWGANSYGQ 288
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S IP R+ G K V CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 25/127 (19%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD TL P + KI ++ G G H ++ + G+V+ WG+ GQLG G+ +
Sbjct: 81 GDVQSTLEPRRLDSLSDKKIACLSYGSGPHIVLATTEGEVFSWGHNAYGQLGNGTINHGL 140
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
H+ S N S K V E+ACG HS V+T G + +
Sbjct: 141 VPSHI--------------------STNLSNKQ----VTEVACGSYHSLVLTSDGEVFAW 176
Query: 314 GWGLYGQ 320
G+ GQ
Sbjct: 177 GYNNSGQ 183
>gi|402914058|ref|XP_003919452.1| PREDICTED: RCC1 domain-containing protein 1 isoform 1 [Papio
anubis]
gi|402914060|ref|XP_003919453.1| PREDICTED: RCC1 domain-containing protein 1 isoform 2 [Papio
anubis]
Length = 376
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 41/198 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL +G++ +WG G+HG+ E P EA ++ +
Sbjct: 166 GAEHALLLDAAGQVFSWGG-----------GRHGQLGHGTLEAELEPRLLEALQGLTMAE 214
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPP 167
AAG H V V+E G++Y WGW E A TR+ G + +++TG
Sbjct: 215 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLN---------- 264
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
E+ + ++T + + P + F P L+ L G KV+ G RHT ++
Sbjct: 265 ------EDGSQVKRTGRVEDGAPAPFIAVQPF---PALLDLPLGSDAVKVSCGSRHTAVV 315
Query: 228 SDMGQVWGWGYGGEGQLG 245
+ G+++ WG+G GQLG
Sbjct: 316 TRTGELYTWGWGKYGQLG 333
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 17/135 (12%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L +R + +
Sbjct: 199 LEPRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETV- 256
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK---------------EIACGGRHSAVVT 305
E +D + R G V A V+ +++CG RH+AVVT
Sbjct: 257 AREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVT 316
Query: 306 DAGALLTFGWGLYGQ 320
G L T+GWG YGQ
Sbjct: 317 RTGELYTWGWGKYGQ 331
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 99/261 (37%), Gaps = 44/261 (16%)
Query: 86 LTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD-FG 144
L SG+ + P PL V + +A W++ VT G V G C +A RD +
Sbjct: 21 LGSGRGHQVHSPSPLRAGVDVCRVSASWSYTAFVTRGGRVELSGSASC--AAGGCRDAWA 78
Query: 145 SAGSFQKDSTGK-QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE-FFTLS 202
S G G AL AP S R GE + A EE + L
Sbjct: 79 SEGLLLVLRAGPGPEALLQAWAPDSALR-GEPLWAHNVVPEAVEEDDPDGEAQTGRLPLL 137
Query: 203 PCLVT-----------LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
PC L P ++ ++ G H L+L GQV+ WG G GQLG G+ ++
Sbjct: 138 PCARAYVSPRPPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT-LE 196
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
P L+ L+ + E+A GG HS V++ G +
Sbjct: 197 AELEPRLLEALQGLT------------------------MAEVAAGGWHSVCVSETGDIY 232
Query: 312 TFGWGLYGQRM--AKCLAGDG 330
+GW GQ + LA DG
Sbjct: 233 IWGWNESGQLALPTRNLAEDG 253
>gi|297807193|ref|XP_002871480.1| hypothetical protein ARALYDRAFT_487995 [Arabidopsis lyrata subsp.
lyrata]
gi|297317317|gb|EFH47739.1| hypothetical protein ARALYDRAFT_487995 [Arabidopsis lyrata subsp.
lyrata]
Length = 554
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 90/222 (40%), Gaps = 65/222 (29%)
Query: 98 FPLPTEAS--VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
P+P + S ++ AAG AH +++T G VY+WG G F + TG
Sbjct: 8 LPIPEDLSRKIISLAAGEAHTIALTGDGCVYSWG----------------RGMFGRLGTG 51
Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
K+S +E+V R E N A GD ++I
Sbjct: 52 KES---------------DELVPVR----VEFEFPNQAEGDR--------------IRIV 78
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-EHAASGKDRPLL 274
+AAG H+L +SD G VW WGY GQLG + P LI L E AS
Sbjct: 79 GIAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDGENSLAPC--LIKNLFEQGAS------- 129
Query: 275 VRQGSVNSSGKAGRSYVK--EIACGGRHSAVVTDAGALLTFG 314
S+N SG+ RS +K + G S + + G L +G
Sbjct: 130 --ISSLNDSGREARSDLKVCAVKAGSMMSLAIDNVGGLWMWG 169
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 58/131 (44%), Gaps = 27/131 (20%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
KI +AAG HT+ L+ G V+ WG G G+LG G + L+P
Sbjct: 17 KIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKE-----SDELVP------------ 59
Query: 273 LLVR-QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ-------RMAK 324
VR + + + R + IA G HS V+D G++ +G+ +YGQ +A
Sbjct: 60 --VRVEFEFPNQAEGDRIRIVGIAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDGENSLAP 117
Query: 325 CLAGDGINMGS 335
CL + G+
Sbjct: 118 CLIKNLFEQGA 128
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 49/128 (38%), Gaps = 40/128 (31%)
Query: 211 GVKITKVAAGGRHTLIL-----------SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
G + KVA G H + L D+ ++ WG GQLG+G R
Sbjct: 198 GRTVLKVACGDEHVVALVGPGDINKDNSYDVSVLYSWGNNHHGQLGVGDR---------- 247
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA-------GALLT 312
+ RP +V + NS V EIACG H+A++T T
Sbjct: 248 -------ESRPRPQIVETFNQNSGLT-----VYEIACGAHHTALLTYKKETPKGPSICWT 295
Query: 313 FGWGLYGQ 320
FG+G GQ
Sbjct: 296 FGFGENGQ 303
>gi|218201187|gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
Length = 395
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 116/294 (39%), Gaps = 46/294 (15%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA G+L TWG + K +P P S+V+AA G HC++V +
Sbjct: 56 SLAICADGRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDK 115
Query: 123 GEVYTWG---WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR----AGEE 175
G Y WG + +C A+ D A ++D +P AP R G
Sbjct: 116 GRAYAWGGNEYGQCGEEAERKEDGTRA--LRRDIP-----IPQRCAPKLKVRQVAAGGTH 168
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
V + + GD +P V VK+ +A G H L L++ G +W
Sbjct: 169 SVVLTQDGHVWTWGQPWPPGDIKQISTPVRVQGLENVKV--IAVGAFHNLALTEDGILWA 226
Query: 236 WGYGGEGQLGLGS---RIKMVPTPHL--IPCLEHAASGKDRPLLVRQGSVNSSGK----- 285
WG GQLG G R + + L + ++ AA G L ++G V + G+
Sbjct: 227 WGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGR 286
Query: 286 -------------------AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
AG + +++CGG HS +T G + ++G G +G+
Sbjct: 287 LGFGDDKSSHMVPQKVELLAGEDII-QVSCGGTHSVALTRDGRMFSYGRGDHGR 339
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 109/275 (39%), Gaps = 46/275 (16%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
PIP R + V GG ++ ++ G + TWG G + P +
Sbjct: 148 PIPQRCAPKLKVRQVAAGGT-HSVVLTQDGHVWTWGQP-------WPPGDIKQISTPVRV 199
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
+V A G H +++TE G ++ WG ++G G+ D+ + +
Sbjct: 200 QGLENVKVIAVGAFHNLALTEDGILWAWG----------NNEYGQLGT--GDTQPRSQPI 247
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASG-----------DEFFTLSPCLVTLN 209
E SD + +++ +E E A G D+ + P V L
Sbjct: 248 RVEGL--SDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVELL 305
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
G I +V+ GG H++ L+ G+++ +G G G+LG G + V T H +
Sbjct: 306 AGEDIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYG---RKVTTGHPM---------- 352
Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
+ P+ + + G+ + +ACGGRH+ +
Sbjct: 353 EVPIDLPPPGTSGGDSGGQWQARYVACGGRHTLAI 387
>gi|410988349|ref|XP_004000448.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Felis
catus]
Length = 993
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 27/113 (23%)
Query: 210 PGV--KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
PG+ K+ +VA GG HT++L++ V+ +G G GQLGLG+ + P +I EH
Sbjct: 239 PGIPEKVVQVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKVI---EHVKD 294
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
K + I+CG H+A++TD G + TFG G YG+
Sbjct: 295 QK---------------------ISSISCGENHTALITDIGLMYTFGDGRYGK 326
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 56/139 (40%), Gaps = 31/139 (22%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
C+ L P K+ A G HTL+ ++ G+V+ G EGQLGLG I +
Sbjct: 80 CVKALKPE-KVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERNTFHLISFFTS 138
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
H I L +A L G + NS G+ G V I+
Sbjct: 139 QHKIKQL--SAGSNTSAALTEDGELFMWGDNSEGQIGLKDVTNVCVPQQVTVGKPISWIS 196
Query: 296 CGGRHSAVVTDAGALLTFG 314
CG HSA VT G L TFG
Sbjct: 197 CGYYHSAFVTTEGELYTFG 215
>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
africana]
Length = 551
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 97/235 (41%), Gaps = 42/235 (17%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL K C G G LAT+E G++ TWG S L +G P
Sbjct: 89 PRRLDSLSGKKIACLSYGSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCY 144
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG+ ++G ST
Sbjct: 145 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTAN 191
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--------------ASGDEFFTLS 202
Q +P +A + + S A ++ +SG++ +
Sbjct: 192 Q-PIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYNGNGQLGLGSSGNQ---PT 247
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
PC V G+ + +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 248 PCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 140 LVPCYISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G +
Sbjct: 199 TGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIH 258
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 259 VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 288
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 136 -TNHGLVPCYI---------------STNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 176 WGYNNSGQ 183
>gi|81885004|sp|Q6NXM2.1|RCBT1_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 1
gi|44890811|gb|AAH67005.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Mus musculus]
Length = 531
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 120/321 (37%), Gaps = 89/321 (27%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L T+E G + WG G S L +G + P + T V++ A G H +++
Sbjct: 87 VLLTTEDGVVYAWGH---NGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GE++ WG+ C G GS ST Q P+ ++
Sbjct: 144 AADGELFAWGYNNC----------GQVGS---GSTANQ---------PTPRK-------- 173
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
++ CL T ++ +A G ++ + D G+V+GWGY
Sbjct: 174 ---------------------VTNCLHT----KRVVNIACGQTSSMAVLDSGEVYGWGYN 208
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G GQLGLG+ + TP VR +++ V +I CG
Sbjct: 209 GNGQLGLGNNGNQL-TP------------------VRVAALHGMC------VNQIVCGYA 243
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
H+ +TD G L +G YGQ
Sbjct: 244 HTLALTDEGLLYAWGANTYGQ 264
>gi|380793883|gb|AFE68817.1| RCC1 domain-containing protein 1, partial [Macaca mulatta]
Length = 339
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 41/198 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL +G++ +WG G+HG+ E P EA ++ +
Sbjct: 129 GAEHALLLDAAGQVFSWGG-----------GRHGQLGHGTLEAELEPRLLEALQGLTMAE 177
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPP 167
AAG H V V+E G++Y WGW E A TR+ G + +++TG
Sbjct: 178 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLN---------- 227
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
E+ + ++T + + P + F P L+ L G KV+ G RHT ++
Sbjct: 228 ------EDGSQVKRTGRVEDGAPAPFIAVQPF---PALLDLPLGSDAVKVSCGSRHTAVV 278
Query: 228 SDMGQVWGWGYGGEGQLG 245
+ G+++ WG+G GQLG
Sbjct: 279 TRTGELYTWGWGKYGQLG 296
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 17/135 (12%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L +R + +
Sbjct: 162 LEPRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETV- 219
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK---------------EIACGGRHSAVVT 305
E +D + R G V A V+ +++CG RH+AVVT
Sbjct: 220 AREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVT 279
Query: 306 DAGALLTFGWGLYGQ 320
G L T+GWG YGQ
Sbjct: 280 RTGELYTWGWGKYGQ 294
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 27/130 (20%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L+P ++ ++ G H L+L GQV+ WG G GQLG G+ ++ P L+ L
Sbjct: 112 PFYRPLDPALRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT-LEAELEPRLLEAL 170
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQRM 322
+ + E+A GG HS V++ G + +GW GQ
Sbjct: 171 QGLT------------------------MAEVAAGGWHSVCVSETGDIYIWGWNESGQLA 206
Query: 323 --AKCLAGDG 330
+ LA DG
Sbjct: 207 LPTRNLAEDG 216
>gi|322785446|gb|EFZ12117.1| hypothetical protein SINV_05294 [Solenopsis invicta]
Length = 585
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 84/215 (39%), Gaps = 80/215 (37%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
+V A G H V++ E GE+Y WG C G AGS ++ T Q
Sbjct: 184 IVDIACGSHHSVALNEDGEIYAWGQNNC----------GQAGS----------SITTNQG 223
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
P R+ + N A G K+ ++A G T+
Sbjct: 224 VP------------------RQVNSNLA-----------------GKKVAQIACGQTSTV 248
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
L + G+V+GWGY G GQLG+G+ + + PC R G++
Sbjct: 249 ALLENGEVYGWGYNGVGQLGIGNYVN-----QMTPC--------------RIGTL----- 284
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G VK +ACG H+ +TD G L +G YGQ
Sbjct: 285 LGTVIVK-VACGYVHTLALTDEGQLYVWGGNSYGQ 318
>gi|118084855|ref|XP_417055.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Gallus gallus]
Length = 566
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 91/221 (41%), Gaps = 38/221 (17%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
LCG G G LAT E G++ TWG S L +G P + T
Sbjct: 111 LCGKKIACLSYGSGPHVVLATEE-GEVYTWGH---NAYSQLGNGTTNHGLVPCQVSTNLV 166
Query: 105 --SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
V++ A G H + +T GEVYTWG + ++G ST Q +P
Sbjct: 167 NKKVIEVACGSHHSMVLTSDGEVYTWG-------------YNNSGQVGSGSTANQ-PIPR 212
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTL 208
+ + + S A E+ +SG++ +PC +
Sbjct: 213 RVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQ---PTPCRIAA 269
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
G+++ +VA G HTL+L+D GQ++ WG GQLG G++
Sbjct: 270 LQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNK 310
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC V+ N K+ +VA G H+++L+ G+V+ WGY GQ+G GS P P +
Sbjct: 156 LVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ-PIPRRV 214
Query: 260 -PCLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 215 TSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 274
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 275 VQRVACGCAHTLVLTDEGQIYAWGANSYGQ 304
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 69/175 (39%), Gaps = 26/175 (14%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S PIP R+ K V CG ++A E+G++ WG
Sbjct: 189 VYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGY- 247
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
G L G G P P + V + A G AH + +T+ G++Y WG
Sbjct: 248 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWG------- 298
Query: 137 AKVTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
A S+ + TG +S + PT D+ TS+A+ +S
Sbjct: 299 ---------ANSYGQLGTGNKSNQSYPTTVTVDKDRVVEIAACHSAHTSAAKTQS 344
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 27/129 (20%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T+ P + G KI ++ G G H ++ ++ G+V+ WG+ QLG G+
Sbjct: 96 TGDIQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGT---- 151
Query: 253 VPTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
T H L+PC Q S N K V E+ACG HS V+T G +
Sbjct: 152 --TNHGLVPC---------------QVSTNLVNKK----VIEVACGSHHSMVLTSDGEVY 190
Query: 312 TFGWGLYGQ 320
T+G+ GQ
Sbjct: 191 TWGYNNSGQ 199
>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
Length = 1053
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 100/271 (36%), Gaps = 84/271 (30%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKA 109
+++ CG A LA ++ G++ WG D GQ L+ + P +E + +
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVFAWGLGSD-GQLGLSIVEDCLRVPRTVKSLSEVHITQV 142
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G+ H +++ GE+++WG + +G G G+Q A
Sbjct: 143 ACGYWHSLALARGGEIFSWGQNK----------YGQLG------LGQQGAC--------- 177
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
SP ++ G+ +++AGG H+ L+
Sbjct: 178 ------------------------------VCSPQVIQSLQGIPFGQISAGGAHSFGLTL 207
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
G ++GWG GQLGLG DR V ++ S
Sbjct: 208 SGAIFGWGRNKFGQLGLG-------------------DNDDRRFPVLLKTLRS------Q 242
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V I CG H+A +T G + TFG G YGQ
Sbjct: 243 QVVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 41.2 bits (95), Expect = 0.66, Method: Composition-based stats.
Identities = 60/247 (24%), Positives = 100/247 (40%), Gaps = 49/247 (19%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEASVVKAAAGW 113
CG+ +LA + G++ +WG + GQ L G+ G +P+ + +AG
Sbjct: 143 ACGYWHSLALARGGEIFSWGQ-NKYGQ--LGLGQQGACVCSPQVIQSLQGIPFGQISAGG 199
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
AH +T +G ++ WG FG G D L T ++
Sbjct: 200 AHSFGLTLSGAIFGWG----------RNKFGQLGLGDNDDRRFPVLLKTLRS-------- 241
Query: 174 EEVV----KRRKTSSAREES---ENPASGDEFFTLSPCLVTLNP-------GVKITKVAA 219
++VV T++ +E A G + +NP G ++++A
Sbjct: 242 QQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSVVSQIAC 301
Query: 220 GGRHTL-ILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTP-------HLIPCLEHAASGKD 270
G +HTL + G++ +G GG GQLG S ++ PTP H PC+E S +
Sbjct: 302 GRQHTLAFIPSSGKIDSFGLGGNGQLGTRSTCNRISPTPVKGCWRAHADPCVELCISEAE 361
Query: 271 RPLLVRQ 277
R V++
Sbjct: 362 RSYCVKR 368
>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
Length = 1053
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 90/367 (24%), Positives = 128/367 (34%), Gaps = 70/367 (19%)
Query: 22 VYMWGY-------LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
+Y WG L G E+ S IP + DS + G L + SGK+
Sbjct: 3 LYCWGNASHGQLGLGGIEDEQILTPSQIPWK---PDSAVNQVACGHRHTLFLTASGKVYA 59
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPT--EASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
GS D Y G T P +P + + + A G H +++TE G+V +WG E
Sbjct: 60 CGSND-----YSQLGHELPTKRPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWGDNE 114
Query: 133 C-----------VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
C + K+ R S Q S T G + +
Sbjct: 115 CGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALT--CCGELYSWGSNIYGQLG 172
Query: 182 TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
S E S+ P +T G+ +A GG HT ++S V+GWG
Sbjct: 173 VKSPSELSQ---------CNYPMRLTTLLGIPAAAIACGGNHTFLISKSSAVFGWGRNNC 223
Query: 242 GQLGLGSRIKMVPTPHLIPC----LEHAASGKD-RPLLVRQGSVNSSGKAGR-------- 288
GQLGL L + A G + L +G V + G
Sbjct: 224 GQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFS 283
Query: 289 --------------SYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQ---RMAKCLAGDG 330
S + ++ACG RH+ A+V G + FG G GQ R K L
Sbjct: 284 SNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRNTKSLNLPQ 343
Query: 331 INMGSWV 337
+ +G WV
Sbjct: 344 VVIGPWV 350
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 73/298 (24%), Positives = 117/298 (39%), Gaps = 70/298 (23%)
Query: 71 KLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYT 127
+L WG+A GQ L G E TP P +++V + A G H + +T +G+VY
Sbjct: 2 ELYCWGNAS-HGQLGL-GGIEDEQILTPSQIPWKPDSAVNQVACGHRHTLFLTASGKVYA 59
Query: 128 WGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---QAPPSDKRAGEEVVKRRKTSS 184
G + D+ G LPT+ Q P + ++ + S
Sbjct: 60 CG----------SNDYSQLGH----------ELPTKRPLQIPELEDYVITQIACGSRHSM 99
Query: 185 AREE-------SENPA-----SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
A E +N + D+ P +V + ++A G H+L L+ G+
Sbjct: 100 ALTEWGQVLSWGDNECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGE 159
Query: 233 VWGWGYGGEGQLGLGSRIKM--------VPTPHLIPCLEHAASGKDRPLLVRQGSV---- 280
++ WG GQLG+ S ++ + T IP A G L+ + +V
Sbjct: 160 LYSWGSNIYGQLGVKSPSELSQCNYPMRLTTLLGIPAAAIACGGNHTFLISKSSAVFGWG 219
Query: 281 -NSSGKAG------RSY-----------VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
N+ G+ G R+Y V+ +ACG S +T+ G + T G G YGQ
Sbjct: 220 RNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 277
>gi|73988984|ref|XP_542558.2| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Canis lupus familiaris]
Length = 531
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 118/321 (36%), Gaps = 89/321 (27%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEV+ WG+ C G GS G + PT R
Sbjct: 144 AADGEVFAWGYNNC----------GQVGS------GSTTNQPT---------------PR 172
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+ T+ + ++ +A G ++ + D G+V+GWGY
Sbjct: 173 KVTNCLHIK------------------------RVVGIACGQTSSMAVLDNGEVYGWGYN 208
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G GQLGLG+ + TP VR +++S V +I CG
Sbjct: 209 GNGQLGLGNNGNQL-TP------------------VRVAALHSVC------VNQIVCGYA 243
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
H+ +TD G L +G YGQ
Sbjct: 244 HTLALTDEGLLYAWGANTYGQ 264
>gi|428170480|gb|EKX39405.1| hypothetical protein GUITHDRAFT_59944, partial [Guillardia theta
CCMP2712]
Length = 234
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 109/252 (43%), Gaps = 52/252 (20%)
Query: 62 FALATSESGKLITWGSADDEGQSYL---TSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
+L +G ++ WGS D GQ L S G + P ++V AAG H ++
Sbjct: 7 HSLLLFSNGSVLAWGSNSD-GQLGLPPSCSDAAGHLLQGLP-----AIVSVAAGHRHSLA 60
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+T G VY WG VP G G +ST + + + + R E VV+
Sbjct: 61 LTADGSVYAWG--ANVP--------GQLGDGSLESTWRPTCVLS-------SRGSERVVR 103
Query: 179 ----RRKTSSAREESENPASGDEFF-----------TLSPCLVTLNPGVKITKVAAGGRH 223
R + + A G + F L P V L GV++ ++AAGG H
Sbjct: 104 VAAGRAHSMALLSNGTVMAWGWDAFGQLGQEEPQGAALRPRAVALPQGVRVCQIAAGGVH 163
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVRQGSV 280
+L L + GQVWGWG G GQ+G G R+ P + LE A A+G L V +G +
Sbjct: 164 SLALDEKGQVWGWGGNGCGQVGEG-RVSYSSRP--VVVLEEASSIAAGASHSLAVARGGL 220
Query: 281 -----NSSGKAG 287
N++G+ G
Sbjct: 221 YGWGSNANGELG 232
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 50/130 (38%), Gaps = 26/130 (20%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL--IPCLEHAASGKDRPL- 273
V AGG H+L+L G V WG +GQLGL L +P + A+G L
Sbjct: 1 VIAGGEHSLLLFSNGSVLAWGSNSDGQLGLPPSCSDAAGHLLQGLPAIVSVAAGHRHSLA 60
Query: 274 LVRQGSVNSSG-----------------------KAGRSYVKEIACGGRHSAVVTDAGAL 310
L GSV + G G V +A G HS + G +
Sbjct: 61 LTADGSVYAWGANVPGQLGDGSLESTWRPTCVLSSRGSERVVRVAAGRAHSMALLSNGTV 120
Query: 311 LTFGWGLYGQ 320
+ +GW +GQ
Sbjct: 121 MAWGWDAFGQ 130
>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
HERC2-like [Bombus terrestris]
Length = 5151
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L LS G V+ WG G +G+LG G+R+ DR
Sbjct: 4379 VKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMY-----------------DR 4421
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + G V +IACGG HSA +T AG L T+G G YG+
Sbjct: 4422 PKLIEE-------LLGTEIV-DIACGGHHSAAITSAGWLYTWGKGRYGR 4462
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
GD+ P L+ I K+A +GG+H L L+ G+++ WG G +G+LG G+ + +
Sbjct: 3327 GDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSL 3386
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
D+P L+ S K+ R +++IACG HSA +T +G L T
Sbjct: 3387 -----------------DKPRLIE------SLKSKR--IRDIACGSGHSAAITSSGELYT 3421
Query: 313 FGWGLYGQ 320
+G G YG+
Sbjct: 3422 WGLGEYGR 3429
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 106/277 (38%), Gaps = 64/277 (23%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVT 120
ALA ++ GK+ +WG +D L G +P + + S + A G H ++T
Sbjct: 3358 ALALTQDGKIFSWGEGED---GKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAIT 3414
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV--- 177
+GE+YTWG G G T Q Q+ G+ V+
Sbjct: 3415 SSGELYTWG-------------LGEYGRLGHGDTATQMKPKLVQS-----LVGQRVIQVA 3456
Query: 178 ---KRRKTSSAREESENPASGDEFF----------TLSPCLVTLNPGVKITKVAAGGRHT 224
+ +T + + + GD F +P L+ G+ + ++ G + +
Sbjct: 3457 CGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFS 3516
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L L+ G+VW WG G +LG G+ +H +P LV G
Sbjct: 3517 LALTKYGEVWTWGKGDYFRLGHGN--------------DHHVR---KPTLVE-------G 3552
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQR 321
G+ V +A G H VTD G + +G +GQ+
Sbjct: 3553 LRGKKVV-HVAVGALHCLAVTDTGQVYAWGDNDHGQQ 3588
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + T H P ++ A G HCV+
Sbjct: 4545 GSQFSVALTRSGAIYTWGKGDYHRLGHGTD-DHVRRPRKVAALQGKKIISIATGSLHCVA 4603
Query: 119 VTEAGEVYTWG 129
T+ GEV+TWG
Sbjct: 4604 CTDKGEVFTWG 4614
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 105/274 (38%), Gaps = 72/274 (26%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET-----PEPFPLPTEASVVKAAAGW 113
G G + A + SG+L TWG + Y G HG+T P+ V++ A G
Sbjct: 3406 GSGHSAAITSSGELYTWGLGE-----YGRLG-HGDTATQMKPKLVQSLVGQRVIQVACGS 3459
Query: 114 --AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
A +++T G VY+WG DFG G + S G + L D+
Sbjct: 3460 RDAQTMALTADGSVYSWG----------DGDFGKLG--RGGSDGCYTPLLI------DRL 3501
Query: 172 AGEEVVKRR---KTSSA-----------REESENPASGDEFFTLSPCLVTLNPGVKITKV 217
G VV+ + S A + + G++ P LV G K+ V
Sbjct: 3502 NGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHV 3561
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
A G H L ++D GQV+ WG GQ G GS I + P L+ L+ A
Sbjct: 3562 AVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTI-VNKKPSLVHELDDAR----------- 3609
Query: 278 GSVNSSGKAGRSYVKEIACGGRHSA--VVTDAGA 309
V ++CG HS V+TD A
Sbjct: 3610 -------------VNRVSCGSSHSIAWVLTDQPA 3630
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 77/218 (35%), Gaps = 70/218 (32%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G P+ E+ V+K
Sbjct: 4490 CGSGDAQTLCVTDDDNVWSWGDGD-----YGKLGRGGSDGCKIPMKIESLAGLGVIKVEC 4544
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G V++T +G +YTWG G + + G
Sbjct: 4545 GSQFSVALTRSGAIYTWG----------------KGDYHRLGHG---------------- 4572
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ V + RK ++ + G KI +A G H + +D G
Sbjct: 4573 TDDHVRRPRKVAALQ------------------------GKKIISIATGSLHCVACTDKG 4608
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
+V+ WG EGQLG G+ + P L+ HA GK
Sbjct: 4609 EVFTWGDNDEGQLGDGT-TSALQRPRLV----HALQGK 4641
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 31/152 (20%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GD + P LV IT +A G ++ +LS G+++ WG G G+LG G+ V
Sbjct: 540 GDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNS-DNVL 598
Query: 255 TPHLIPCLE-----HAA--SGKDRPLLVRQGSVNSS------GKAGRS------------ 289
P L+ L H A SG + L V + S GK GR
Sbjct: 599 IPTLVTALNGHMVVHVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVD 658
Query: 290 -----YVKEIACGGRHSAVVTDAGALLTFGWG 316
V ++ CGG+ SA +T G + T+G G
Sbjct: 659 KLLDINVAKVYCGGQFSAALTAYGEVYTWGKG 690
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 27/109 (24%)
Query: 214 ITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+T +A+ G H L L+ V+ WG G G+LG G R+ D
Sbjct: 505 VTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDRV-----------------WYDE 547
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P LV + V+ + + IACG +SAV++ G L T+G G YG+
Sbjct: 548 PKLV-EALVDKN-------ITFIACGSTYSAVLSSNGELYTWGRGNYGR 588
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 61/154 (39%), Gaps = 31/154 (20%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G+ P L+ G +I +A GG H+ ++ G ++ WG G G+LG G +
Sbjct: 4414 GNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQL- 4472
Query: 255 TPHLIPCLEH-------AASGKDRPLLVRQGSV------NSSGKAGRS------------ 289
TP L+ L+ SG + L V GK GR
Sbjct: 4473 TPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIE 4532
Query: 290 -----YVKEIACGGRHSAVVTDAGALLTFGWGLY 318
V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4533 SLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDY 4566
>gi|405950964|gb|EKC18916.1| RCC1 and BTB domain-containing protein 1 [Crassostrea gigas]
Length = 531
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 92/220 (41%), Gaps = 30/220 (13%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAA 110
D+ G LA S++G++ +WG G L +G G+ P + T +++ A
Sbjct: 78 DIAFGSGPHVLAVSKNGEMYSWG---HNGYCQLGNGGSGQGLTPTLINTNLQGKKILRVA 134
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G H +++++ GE++ WG C G GS ST Q A +K
Sbjct: 135 CGSHHSMALSQEGEIFAWGQNNC----------GQVGS---GSTTNQPTPRKVVAVIGNK 181
Query: 171 RAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
A + + + E E G+ +PC V GV I+++ G
Sbjct: 182 MALSIACGQTSSMALLENGEVYGWGYNGNGQLGLGNNVNQPNPCRVQQLQGVIISQLVCG 241
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
HTL LSD G ++ WG GQLG G++ V +P +P
Sbjct: 242 YAHTLALSDEGSLFSWGANSYGQLGTGNKANQV-SPSKVP 280
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L+P L+ N G KI +VA G H++ LS G+++ WG GQ+G GS PTP +
Sbjct: 116 LTPTLINTNLQGKKILRVACGSHHSMALSQEGEIFAWGQNNCGQVGSGSTTNQ-PTPRKV 174
Query: 260 P-------CLEHAASGKDRPLLVRQGSV-----NSSGKAGR-----------------SY 290
L A L+ G V N +G+ G
Sbjct: 175 VAVIGNKMALSIACGQTSSMALLENGEVYGWGYNGNGQLGLGNNVNQPNPCRVQQLQGVI 234
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ ++ CG H+ ++D G+L ++G YGQ
Sbjct: 235 ISQLVCGYAHTLALSDEGSLFSWGANSYGQ 264
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 52/123 (42%), Gaps = 27/123 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD + P V + KI +A G G H L +S G+++ WG+ G QLG G + +
Sbjct: 57 GDAHSSFEPRKVDVLCKKKIVDIAFGSGPHVLAVSKNGEMYSWGHNGYCQLGNGGSGQGL 116
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
TP LI + N GK + +ACG HS ++ G + F
Sbjct: 117 -TPTLI-------------------NTNLQGKK----ILRVACGSHHSMALSQEGEI--F 150
Query: 314 GWG 316
WG
Sbjct: 151 AWG 153
>gi|145495055|ref|XP_001433521.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400639|emb|CAK66124.1| unnamed protein product [Paramecium tetraurelia]
Length = 447
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 133/340 (39%), Gaps = 84/340 (24%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGD---SWKDVCGGGCGFALATSESGKLITWGSA 78
V+MWG G K L I + +W D GCG +++ GKL S
Sbjct: 57 VFMWG--QGIQIPKQLELQDIEQIAASKEHWFAWSDTQVFGCG----SNKQGKLGMNNSV 110
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEAS-----VVKAAAGWAHCVSVTEAGE---VYTWGW 130
+ TP F + +EAS + K A G H V++ E E ++ WG
Sbjct: 111 N--------------TPTLFDIFSEASQYGWQLQKIAVGLDHSVALIEVEEENKIFVWG- 155
Query: 131 RECVPSAKVTRDFGSAGSFQK---DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE 187
+ ++Q+ D++ + A+P + + R + + T + E
Sbjct: 156 ---------------SNAYQQLGFDASEQFVAIPHQLDSDNLPRIVDIYAQHNYTMAIDE 200
Query: 188 ESENPASGDEFF------TLSPCLVTLNP-----GVKITKVAAGGRHTLILSDMGQVWGW 236
E + G F + C+ +P +KI K+A G H L + G ++ W
Sbjct: 201 EGRLFSWGSNEFGRLGQNAFAKCMKLPSPITSLGNLKIAKLALGTFHVLAIDTQGNLYSW 260
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCL---EHAASGKDRPL-LVRQGSVNS--SGKAGR-- 288
G G +GQLG G+ P+ I L A G+ + L GSV SG+ G+
Sbjct: 261 GRGLQGQLGHGTS-NDCSKPNQISSLSSIRDVACGEAHSMALQNNGSVYVFGSGQFGQLG 319
Query: 289 --SYVKE------------IACGGRHSAVVTDAGALLTFG 314
Y ++ IACG HSAV+T GAL FG
Sbjct: 320 LGDYKQQDAPQMLQIHGEMIACGRHHSAVLTKNGALFMFG 359
>gi|410947356|ref|XP_003980415.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Felis catus]
Length = 531
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 118/321 (36%), Gaps = 89/321 (27%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEV+ WG+ C G GS G + PT R
Sbjct: 144 AADGEVFAWGYNNC----------GQVGS------GSTTNQPT---------------PR 172
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+ T+ + ++ +A G ++ + D G+V+GWGY
Sbjct: 173 KVTNCLHIK------------------------RVVGIACGQTSSMAVLDNGEVYGWGYN 208
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G GQLGLG+ + TP VR +++S V +I CG
Sbjct: 209 GNGQLGLGNNGNQL-TP------------------VRVAALHSVC------VNQIVCGYA 243
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
H+ +TD G L +G YGQ
Sbjct: 244 HTLALTDEGLLYAWGANTYGQ 264
>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Apis florea]
Length = 4812
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L LS G V+ WG G +G+LG G+R+ DR
Sbjct: 4040 VKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSY-----------------DR 4082
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + G V +IACGG HSA +T AG L T+G G YG+
Sbjct: 4083 PKLIEE-------LLGTEIV-DIACGGHHSAAITSAGWLYTWGKGRYGR 4123
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+K V +GG+H L L+ G+V+ WG G +G+LG G+ I + D+
Sbjct: 3021 IKKVSVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISL-----------------DK 3063
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ S K+ R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3064 PRLIE------SLKSKR--IRDIACGSGHSAAITSSGELYTWGLGEYGR 3104
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 107/279 (38%), Gaps = 68/279 (24%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVT 120
ALA ++ GK+ +WG +D L G +P + + S + A G H ++T
Sbjct: 3033 ALALTQDGKVFSWGEGED---GKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAIT 3089
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
+GE+YTWG G G T QS Q+ G+ +++
Sbjct: 3090 SSGELYTWG-------------LGEYGRLGHGDTATQSKPKLVQS-----LVGQRIIQ-- 3129
Query: 181 KTSSAREESENPASGD---------EFFTL---------SPCLVTLNPGVKITKVAAGGR 222
+R+ + D +F L +P L+ G+ + ++ G +
Sbjct: 3130 IACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQ 3189
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
+L L+ G+VW WG G +LG G+ +H +P LV
Sbjct: 3190 FSLALTKYGEVWTWGKGDYFRLGHGN--------------DHHVR---KPTLVE------ 3226
Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQR 321
G G+ + +A G H VTD G + +G +GQ+
Sbjct: 3227 -GLRGKKVI-HVAVGALHCLAVTDIGQVYAWGDNDHGQQ 3263
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 126/320 (39%), Gaps = 62/320 (19%)
Query: 18 KETVVYMWGY--------LPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSE 68
+ + VY+WG L G S K P+ S + ++L K V GG S+
Sbjct: 2932 QHSAVYVWGLNDKDQLGGLKG-SKIKLPVYSEVLSKL------KPVHIAGGSKTLFVVSQ 2984
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEAGEVY 126
GKL G + G+ L + P+P P ++ + K + +G H +++T+ G+V+
Sbjct: 2985 EGKLYACGEGTN-GRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVF 3043
Query: 127 TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR 186
+WG E G S D +L +++ +G TSS
Sbjct: 3044 SWGEGE-------DGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAA---ITSSGE 3093
Query: 187 E------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGY 238
E GD P LV G +I ++A G R T+ L+ G V+ WG
Sbjct: 3094 LYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGD 3153
Query: 239 GGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
G G+LG G + G PLL+ + +N G V +I CG
Sbjct: 3154 GDFGKLGRG-----------------GSDGCYTPLLIDR--LNGLG------VVQIECGA 3188
Query: 299 RHSAVVTDAGALLTFGWGLY 318
+ S +T G + T+G G Y
Sbjct: 3189 QFSLALTKYGEVWTWGKGDY 3208
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + T H P ++ A G HCV+
Sbjct: 4206 GSQFSVALTRSGAIYTWGKGDYHRLGHGTD-DHVRRPRKVAALQGKKIISIATGSLHCVA 4264
Query: 119 VTEAGEVYTWG 129
T+ GEV+TWG
Sbjct: 4265 CTDKGEVFTWG 4275
Score = 44.3 bits (103), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G++ P LV G K+ VA G H L ++D+GQV+ WG GQ G G+ I +
Sbjct: 3214 GNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTI-VNK 3272
Query: 255 TPHLIPCLEHAASGK 269
P L+ L+ A +
Sbjct: 3273 KPSLVHELDDARVNR 3287
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 77/218 (35%), Gaps = 70/218 (32%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G P+ E+ VVK
Sbjct: 4151 CGSGDAQTLCVTDDDNVWSWGDGD-----YGKLGRGGSDGCKIPMKIESLAGLGVVKVEC 4205
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G V++T +G +YTWG G + + G
Sbjct: 4206 GSQFSVALTRSGAIYTWG----------------KGDYHRLGHG---------------- 4233
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ V + RK ++ + G KI +A G H + +D G
Sbjct: 4234 TDDHVRRPRKVAALQ------------------------GKKIISIATGSLHCVACTDKG 4269
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
+V+ WG EGQLG G+ + P L+ HA GK
Sbjct: 4270 EVFTWGDNDEGQLGDGT-TSALQRPRLV----HALQGK 4302
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE----ASVVKAAAGWA 114
G F+LA ++ G++ TWG D Y G + P E V+ A G
Sbjct: 3187 GAQFSLALTKYGEVWTWGKGD-----YFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGAL 3241
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+ G+VY WG
Sbjct: 3242 HCLAVTDIGQVYAWG 3256
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 59/146 (40%), Gaps = 31/146 (21%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L+ G +I +A GG H+ ++ G ++ WG G G+LG G + TP LI L
Sbjct: 4083 PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQL-TPKLIEAL 4141
Query: 263 EH-------AASGKDRPLLVRQGSV------NSSGKAGRS-----------------YVK 292
+ SG + L V GK GR V
Sbjct: 4142 QDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVV 4201
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLY 318
++ CG + S +T +GA+ T+G G Y
Sbjct: 4202 KVECGSQFSVALTRSGAIYTWGKGDY 4227
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 31/152 (20%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMV 253
GD + P L+ IT +A G ++ LS G+++ WG G G+LG G S M+
Sbjct: 540 GDRAWYDEPKLIEALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMI 599
Query: 254 PTP------HLIPCLEHAASGKDRPLLVRQGSVNSS------GKAGRS------------ 289
PT H++ + SG + L V + S GK GR
Sbjct: 600 PTLVTALNGHMVVYVA-CGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVD 658
Query: 290 -----YVKEIACGGRHSAVVTDAGALLTFGWG 316
V ++ CGG+ SA +T G + T+G G
Sbjct: 659 KLLDINVAKVYCGGQFSAALTAYGEVYTWGKG 690
>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Metaseiulus occidentalis]
Length = 4496
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 63/133 (47%), Gaps = 31/133 (23%)
Query: 188 ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
S N A LSP + K V +GGRH L L+ G+V+ WG G +G+LG G
Sbjct: 2721 HSHNVAQPKPLTDLSPYFI------KKVAVHSGGRHALALTIDGRVFSWGEGEDGKLGHG 2774
Query: 248 SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA 307
++I DRP LV S K R ++++ACG HSA VT +
Sbjct: 2775 NKISY-----------------DRPKLVE------SLKCKR--IRDVACGSSHSAAVTSS 2809
Query: 308 GALLTFGWGLYGQ 320
G L T+G G YG+
Sbjct: 2810 GELYTWGSGEYGR 2822
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 27/121 (22%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V +T+VA +GG+H L L+ G V+ WG G +G+LG GS+ + P LI
Sbjct: 3694 TPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSK-ALCERPKLI 3752
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
L +D+ +V +ACGG HSA +T +G L T+G G YG
Sbjct: 3753 ESL------RDK------------------HVVSVACGGAHSACITASGELYTWGKGRYG 3788
Query: 320 Q 320
+
Sbjct: 3789 R 3789
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVKAAAGWA 114
G F+LA S++GK+ TWG D Y G H P+ + +V++ + G
Sbjct: 2905 GAQFSLALSKNGKVWTWGKGD-----YFRLGHGSDSHVRWPQVVEELADKNVIQVSVGAL 2959
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+ GEVY WG
Sbjct: 2960 HCIAVTDRGEVYAWG 2974
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAAGWAHCV 117
G F++A + +G + TWG D + S H P+ + V++ A G HCV
Sbjct: 3872 GSQFSVALTAAGVVYTWGKGDYHRLGH-GSEDHVRRPQAVQGALQGKRVIQVAVGSLHCV 3930
Query: 118 SVTEAGEVYTWG 129
+ T++GEV+TWG
Sbjct: 3931 ACTDSGEVFTWG 3942
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LA + SG + +WG DD G+ S E P+ + VV A G AH +T +G
Sbjct: 3719 LALTSSGDVFSWGEGDD-GKLGHGSKALCERPKLIESLRDKHVVSVACGGAHSACITASG 3777
Query: 124 EVYTWG 129
E+YTWG
Sbjct: 3778 ELYTWG 3783
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G ++ +VA G H + +D G+V+ WG EGQLG GS + P L+ L+
Sbjct: 3916 GKRVIQVAVGSLHCVACTDSGEVFTWGDNDEGQLGDGS-TNAIQRPKLVASLK 3967
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 40/96 (41%), Gaps = 10/96 (10%)
Query: 39 LSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
L P G + DV CG G L S G + +WG D Y G+ G
Sbjct: 3799 LKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGD-----YGKLGRGGSDGCK 3853
Query: 98 FPLPTE----ASVVKAAAGWAHCVSVTEAGEVYTWG 129
FP + A V+K G V++T AG VYTWG
Sbjct: 3854 FPQKIDSLQNAGVIKVECGSQFSVALTAAGVVYTWG 3889
>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
Length = 5118
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L LS G V+ WG G +G+LG G+R+ DR
Sbjct: 4346 VKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMY-----------------DR 4388
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + G V +IACGG HSA +T AG L T+G G YG+
Sbjct: 4389 PKLIEE-------LLGTEIV-DIACGGHHSAAITSAGWLYTWGKGRYGR 4429
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
GD+ P L+ I KVA +GG+H L L+ G+++ WG G +G+LG G+ + +
Sbjct: 3322 GDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSL 3381
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
D+P L+ S K+ R +++IACG HSA +T +G L T
Sbjct: 3382 -----------------DKPRLIE------SLKSKR--IRDIACGSGHSAAITSSGELYT 3416
Query: 313 FGWGLYGQ 320
+G G YG+
Sbjct: 3417 WGLGEYGR 3424
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 106/277 (38%), Gaps = 64/277 (23%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVT 120
ALA ++ GK+ +WG +D L G +P + + S + A G H ++T
Sbjct: 3353 ALALTQDGKIFSWGEGED---GKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAIT 3409
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV--- 177
+GE+YTWG G G T Q Q+ G+ V+
Sbjct: 3410 SSGELYTWG-------------LGEYGRLGHGDTATQMKPKLVQS-----LVGQRVIQVA 3451
Query: 178 ---KRRKTSSAREESENPASGDEFF----------TLSPCLVTLNPGVKITKVAAGGRHT 224
+ +T + + + GD F +P L+ G+ + ++ G + +
Sbjct: 3452 CGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFS 3511
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L L+ G+VW WG G +LG G+ +H +P LV G
Sbjct: 3512 LALTKYGEVWTWGKGDYFRLGHGN--------------DHHVR---KPTLVE-------G 3547
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQR 321
G+ V +A G H VTD G + +G +GQ+
Sbjct: 3548 LRGKKVV-HVAVGALHCLAVTDTGQVYAWGDNDHGQQ 3583
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + T H P ++ A G HCV+
Sbjct: 4512 GSQFSVALTRSGAIYTWGKGDYHRLGHGTD-DHVRRPRKVAALQGKKIISIATGSLHCVA 4570
Query: 119 VTEAGEVYTWG 129
T+ GEV+TWG
Sbjct: 4571 CTDKGEVFTWG 4581
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 105/274 (38%), Gaps = 72/274 (26%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET-----PEPFPLPTEASVVKAAAGW 113
G G + A + SG+L TWG + Y G HG+T P+ V++ A G
Sbjct: 3401 GSGHSAAITSSGELYTWGLGE-----YGRLG-HGDTATQMKPKLVQSLVGQRVIQVACGS 3454
Query: 114 --AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
A +++T G VY+WG DFG G + S G + L D+
Sbjct: 3455 RDAQTMALTADGSVYSWG----------DGDFGKLG--RGGSDGCYTPLLI------DRL 3496
Query: 172 AGEEVVKRR---KTSSA-----------REESENPASGDEFFTLSPCLVTLNPGVKITKV 217
G VV+ + S A + + G++ P LV G K+ V
Sbjct: 3497 NGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHV 3556
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
A G H L ++D GQV+ WG GQ G GS I + P L+ L+ A
Sbjct: 3557 AVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTI-VNKKPSLVHELDDAR----------- 3604
Query: 278 GSVNSSGKAGRSYVKEIACGGRHSA--VVTDAGA 309
V ++CG HS V+TD A
Sbjct: 3605 -------------VNRVSCGSSHSIAWVLTDQPA 3625
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 77/218 (35%), Gaps = 70/218 (32%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G P+ E+ V+K
Sbjct: 4457 CGSGDAQTLCVTDDDNVWSWGDGD-----YGKLGRGGSDGCKIPMKIESLAGLGVIKVEC 4511
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G V++T +G +YTWG G + + G
Sbjct: 4512 GSQFSVALTRSGAIYTWG----------------KGDYHRLGHG---------------- 4539
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ V + RK ++ + G KI +A G H + +D G
Sbjct: 4540 TDDHVRRPRKVAALQ------------------------GKKIISIATGSLHCVACTDKG 4575
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
+V+ WG EGQLG G+ + P L+ HA GK
Sbjct: 4576 EVFTWGDNDEGQLGDGT-TSALQRPRLV----HALQGK 4608
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 63/152 (41%), Gaps = 31/152 (20%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GD + P LV IT +A G ++ +LS G+++ WG G G+LG G+ V
Sbjct: 532 GDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNS-DNVL 590
Query: 255 TPHLIPCLE-HAA------SGKDRPLLVRQGSVNSS------GKAGRS------------ 289
P L+ L H SG + L V + S GK GR
Sbjct: 591 IPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVD 650
Query: 290 -----YVKEIACGGRHSAVVTDAGALLTFGWG 316
V ++ CGG+ SA +T G + T+G G
Sbjct: 651 KLLDINVAKVYCGGQFSAALTAYGEVYTWGKG 682
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 27/109 (24%)
Query: 214 ITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+T +A+ G H L L+ V+ WG G G+LG G R+ D
Sbjct: 497 VTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDRV-----------------WYDE 539
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P LV + V+ + + IACG +SAV++ G L T+G G YG+
Sbjct: 540 PKLV-EALVDKN-------ITFIACGSTYSAVLSSNGELYTWGRGNYGR 580
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 61/154 (39%), Gaps = 31/154 (20%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G+ P L+ G +I +A GG H+ ++ G ++ WG G G+LG G +
Sbjct: 4381 GNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQL- 4439
Query: 255 TPHLIPCLEH-------AASGKDRPLLVRQGSV------NSSGKAGRS------------ 289
TP L+ L+ SG + L V GK GR
Sbjct: 4440 TPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIE 4499
Query: 290 -----YVKEIACGGRHSAVVTDAGALLTFGWGLY 318
V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4500 SLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDY 4533
>gi|301791658|ref|XP_002930797.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
[Ailuropoda melanoleuca]
Length = 348
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 118/321 (36%), Gaps = 89/321 (27%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWG---HNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEV+ WG+ C G GS G + PT R
Sbjct: 144 AADGEVFAWGYNNC----------GQVGS------GSTTNQPT---------------PR 172
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+ T+ + ++ +A G ++ + D G+V+GWGY
Sbjct: 173 KVTNCLHIK------------------------RVVGIACGQTSSMAVLDNGEVYGWGYN 208
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G GQLGLG+ + TP VR +++S V +I CG
Sbjct: 209 GNGQLGLGNNGNQL-TP------------------VRVAALHS------VCVNQIVCGYA 243
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
H+ +TD G L +G YGQ
Sbjct: 244 HTLALTDEGLLYAWGANTYGQ 264
>gi|300794911|ref|NP_001178141.1| RCC1 and BTB domain-containing protein 1 [Bos taurus]
gi|296481892|tpg|DAA24007.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
domain containing protein 1 [Bos taurus]
Length = 531
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 115/321 (35%), Gaps = 89/321 (27%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT S ++ LCG K + G
Sbjct: 28 GTSANEALYVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEV+ WG+ C G GS ST Q P K +KR
Sbjct: 144 AADGEVFAWGYNNC----------GQVGS---GSTANQ--------PTPRKVTNCLHIKR 182
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+ +A G ++ + D G+V+GWGY
Sbjct: 183 ----------------------------------VVGIACGQTSSMAVLDNGEVYGWGYN 208
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G GQLGLG+ + TP VR +++S V +I CG
Sbjct: 209 GNGQLGLGNNGNQL-TP------------------VRVAALHSVC------VNQIVCGYA 243
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
H+ +TD G L +G YGQ
Sbjct: 244 HTLALTDEGLLYAWGANTYGQ 264
>gi|302565090|ref|NP_001180861.1| RCC1 domain-containing protein 1 [Macaca mulatta]
Length = 376
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 41/198 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL +G++ +WG G+HG+ E P EA ++ +
Sbjct: 166 GAEHALLLDAAGQVFSWGG-----------GRHGQLGHGTLEAELEPRLLEALQGLTMAE 214
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPP 167
AAG H V V+E G++Y WGW E A TR+ G + +++TG
Sbjct: 215 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLN---------- 264
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
E+ + ++T + + P + F P L+ L G KV+ G RHT ++
Sbjct: 265 ------EDGSQVKRTGRVEDGAPAPFIAVQPF---PALLDLPLGSDAVKVSCGSRHTAVV 315
Query: 228 SDMGQVWGWGYGGEGQLG 245
+ G+++ WG+G GQLG
Sbjct: 316 TRTGELYTWGWGKYGQLG 333
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 17/135 (12%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L +R + +
Sbjct: 199 LEPRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETV- 256
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK---------------EIACGGRHSAVVT 305
E +D + R G V A V+ +++CG RH+AVVT
Sbjct: 257 AREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVT 316
Query: 306 DAGALLTFGWGLYGQ 320
G L T+GWG YGQ
Sbjct: 317 RTGELYTWGWGKYGQ 331
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 100/262 (38%), Gaps = 46/262 (17%)
Query: 86 LTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD-FG 144
L SG+ + P PL V + +A W++ VT G V +A RD +
Sbjct: 21 LGSGRGHQVHSPSPLRAGVDVCRVSASWSYTAFVTRGGRVELS--GSASGAAGGCRDAWA 78
Query: 145 SAGSFQKDSTGK-QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF--FTL 201
S G G AL AP S R GE + A EE ++P + L
Sbjct: 79 SEGLLLVLRAGPGPEALLQAWAPDSALR-GEPLWAHNVVPEAVEE-DDPGGEAQIGRLPL 136
Query: 202 SPC-----------LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
PC L P ++ ++ G H L+L GQV+ WG G GQLG G+ +
Sbjct: 137 LPCARAYVSPRPPFYRPLAPQLRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT-L 195
Query: 251 KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGAL 310
+ P L+ L+ + E+A GG HS V++ G +
Sbjct: 196 EAELEPRLLEALQGLT------------------------MAEVAAGGWHSVCVSETGDI 231
Query: 311 LTFGWGLYGQRM--AKCLAGDG 330
+GW GQ + LA DG
Sbjct: 232 YIWGWNESGQLALPTRNLAEDG 253
>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
Length = 4643
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L LS G V+ WG G +G+LG G+R+ DR
Sbjct: 3871 VKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSY-----------------DR 3913
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + G V +IACGG HSA +T AG L T+G G YG+
Sbjct: 3914 PKLIEE-------LLGTEIV-DIACGGHHSAAITSAGWLYTWGKGRYGR 3954
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+K V +GG+H L L+ G+V+ WG G +G+LG G+ I + D+
Sbjct: 2877 IKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISL-----------------DK 2919
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ S K+ R +++IACG HSA +T +G L T+G G YG+
Sbjct: 2920 PRLIE------SLKSKR--IRDIACGSGHSAAITSSGELYTWGLGEYGR 2960
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 107/279 (38%), Gaps = 68/279 (24%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVT 120
ALA ++ GK+ +WG +D L G +P + + S + A G H ++T
Sbjct: 2889 ALALTQDGKVFSWGEGED---GKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAIT 2945
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
+GE+YTWG G G T QS Q+ G+ V++
Sbjct: 2946 SSGELYTWG-------------LGEYGRLGHGDTATQSKPKLVQS-----LVGQRVIQ-- 2985
Query: 181 KTSSAREESENPASGD---------EFFTL---------SPCLVTLNPGVKITKVAAGGR 222
+R+ + D +F L +P L+ G+ + ++ G +
Sbjct: 2986 IACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQ 3045
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
+L L+ G+VW WG G +LG G+ +H +P LV
Sbjct: 3046 FSLALTKYGEVWTWGKGDYFRLGHGN--------------DHHVR---KPTLVE------ 3082
Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQR 321
G G+ + +A G H VTD G + +G +GQ+
Sbjct: 3083 -GLRGKKII-HVAVGALHCLAVTDIGQVYAWGDNDHGQQ 3119
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 64/157 (40%), Gaps = 39/157 (24%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G++ P LV G KI VA G H L ++D+GQV+ WG GQ G G+ I +
Sbjct: 3070 GNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTI-VNK 3128
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA--VVTDAGAL-- 310
P L+ L+ A V ++CG HS V+TD A+
Sbjct: 3129 KPSLVHELDDAR------------------------VNRVSCGSSHSIAWVLTDQPAINN 3164
Query: 311 ---LTF-------GWGLYGQRMAKCLAGDGINMGSWV 337
+TF G L +++ GD IN G +
Sbjct: 3165 QEPVTFPTTKDPLGQMLLTSTVSQINGGDIINNGDII 3201
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 126/320 (39%), Gaps = 62/320 (19%)
Query: 18 KETVVYMWGY--------LPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSE 68
+ + VY+WG L G S K P+ S + ++L K V GG S+
Sbjct: 2788 QHSAVYVWGLNDKDQLGGLKG-SKIKLPVYSEVLSKL------KPVHIAGGSKTLFVVSQ 2840
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEAGEVY 126
GKL G + G+ L + P+P P ++ + K A +G H +++T+ G+V+
Sbjct: 2841 EGKLYACGEGTN-GRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVF 2899
Query: 127 TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR 186
+WG E G S D +L +++ +G TSS
Sbjct: 2900 SWGEGE-------DGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAA---ITSSGE 2949
Query: 187 E------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGY 238
E GD P LV G ++ ++A G R T+ L+ G V+ WG
Sbjct: 2950 LYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGD 3009
Query: 239 GGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
G G+LG G + G PLL+ + +N G V +I CG
Sbjct: 3010 GDFGKLGRG-----------------GSDGCYTPLLIDR--LNGLG------VVQIECGA 3044
Query: 299 RHSAVVTDAGALLTFGWGLY 318
+ S +T G + T+G G Y
Sbjct: 3045 QFSLALTKYGEVWTWGKGDY 3064
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + T H P ++ A G HCV+
Sbjct: 4037 GSQFSVALTRSGAIYTWGKGDYHRLGHGTD-DHVRRPRKVAALQGKKIISIATGSLHCVA 4095
Query: 119 VTEAGEVYTWG 129
T+ GEV+TWG
Sbjct: 4096 CTDKGEVFTWG 4106
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 77/218 (35%), Gaps = 70/218 (32%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G P+ E+ V+K
Sbjct: 3982 CGSGDAQTLCVTDDDNVWSWGDGD-----YGKLGRGGSDGCKIPMKIESLAGLGVIKVEC 4036
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G V++T +G +YTWG G + + G
Sbjct: 4037 GSQFSVALTRSGAIYTWG----------------KGDYHRLGHG---------------- 4064
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ V + RK ++ + G KI +A G H + +D G
Sbjct: 4065 TDDHVRRPRKVAALQ------------------------GKKIISIATGSLHCVACTDKG 4100
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
+V+ WG EGQLG G+ + P L+ HA GK
Sbjct: 4101 EVFTWGDNDEGQLGDGT-TSALQRPRLV----HALQGK 4133
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE----ASVVKAAAGWA 114
G F+LA ++ G++ TWG D Y G + P E ++ A G
Sbjct: 3043 GAQFSLALTKYGEVWTWGKGD-----YFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGAL 3097
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+ G+VY WG
Sbjct: 3098 HCLAVTDIGQVYAWG 3112
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 59/146 (40%), Gaps = 31/146 (21%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L+ G +I +A GG H+ ++ G ++ WG G G+LG G + TP LI L
Sbjct: 3914 PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQL-TPKLIEAL 3972
Query: 263 EH-------AASGKDRPLLVRQGSV------NSSGKAGRS-----------------YVK 292
+ SG + L V GK GR V
Sbjct: 3973 QDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVI 4032
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLY 318
++ CG + S +T +GA+ T+G G Y
Sbjct: 4033 KVECGSQFSVALTRSGAIYTWGKGDY 4058
>gi|297697477|ref|XP_002825883.1| PREDICTED: RCC1 domain-containing protein 1 isoform 1 [Pongo
abelii]
Length = 376
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G AL +G++ +WG GQ L G EP L +V A AAG H
Sbjct: 166 GAEHALLLDAAGQVFSWGGGR-HGQ--LGHGTLEAELEPRLLEALQGLVMAEVAAGGWHS 222
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V V+E G++Y WGW E A TR+ G + KD+T E+
Sbjct: 223 VCVSETGDIYIWGWNESGQLALPTRNLVEDGETVAKDAT----------------ELNED 266
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ ++T A + + P + F P L+ L G K + G RHT +++ G+++
Sbjct: 267 GSQVKRTGGAEDGAPAPFIAVQPF---PALLDLPLGSDAVKASCGSRHTAVVTRTGELYT 323
Query: 236 WGYGGEGQLG 245
WG+G GQLG
Sbjct: 324 WGWGKYGQLG 333
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 33/143 (23%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L PT +L+
Sbjct: 199 LEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL-------PTRNLVE 251
Query: 261 CLEHAASGKDRPLLVRQGS-VNSSGKA----------------------GRSYVKEIACG 297
E A KD L GS V +G A G VK +CG
Sbjct: 252 DGETVA--KDATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPLGSDAVK-ASCG 308
Query: 298 GRHSAVVTDAGALLTFGWGLYGQ 320
RH+AVVT G L T+GWG YGQ
Sbjct: 309 SRHTAVVTRTGELYTWGWGKYGQ 331
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 25/119 (21%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P L P ++ ++ G H L+L GQV+ WG G GQLG G+ ++ P L+
Sbjct: 148 APFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT-LEAELEPRLLEA 206
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
L QG V + E+A GG HS V++ G + +GW GQ
Sbjct: 207 L--------------QGLV----------MAEVAAGGWHSVCVSETGDIYIWGWNESGQ 241
>gi|75076912|sp|Q4R828.1|RCCD1_MACFA RecName: Full=RCC1 domain-containing protein 1
gi|67968774|dbj|BAE00744.1| unnamed protein product [Macaca fascicularis]
Length = 376
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 41/198 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL +G++ +WG G+HG+ E P EA ++ +
Sbjct: 166 GAEHALLLDAAGQVFSWGG-----------GRHGQLGHGTLEAELEPRLLEALQGLTMAE 214
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPP 167
AAG H V V+E G++Y WGW E A TR+ G + +++TG
Sbjct: 215 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLN---------- 264
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
E+ + ++T + + P + F P L+ L G KV+ G RHT ++
Sbjct: 265 ------EDGSQVKRTGRVEDGAPAPFIAVQPF---PALLDLPLGSDAVKVSCGSRHTAVV 315
Query: 228 SDMGQVWGWGYGGEGQLG 245
+ G+++ WG+G GQLG
Sbjct: 316 TRTGELYTWGWGKYGQLG 333
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 17/135 (12%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L +R + +
Sbjct: 199 LEPRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETV- 256
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK---------------EIACGGRHSAVVT 305
E +D + R G V A V+ +++CG RH+AVVT
Sbjct: 257 AREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVT 316
Query: 306 DAGALLTFGWGLYGQ 320
G L T+GWG YGQ
Sbjct: 317 RTGELYTWGWGKYGQ 331
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 100/262 (38%), Gaps = 46/262 (17%)
Query: 86 LTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD-FG 144
L SG+ + P PL V + +A W++ VT G V +A RD +
Sbjct: 21 LGSGRGHQVHSPSPLRAGVDVCRVSASWSYTAFVTRGGRVELS--GSASGAAGGCRDAWA 78
Query: 145 SAGSFQKDSTGK-QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF--FTL 201
S G G AL AP S R GE + A EE ++P + L
Sbjct: 79 SEGLLLVLRAGPGPEALLQAWAPDSALR-GEPLWAHSVVPEAVEE-DDPGGEAQIGRLPL 136
Query: 202 SPCLVT-----------LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
PC L P ++ ++ G H L+L GQV+ WG G GQLG G+ +
Sbjct: 137 LPCARAYVSPRPPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT-L 195
Query: 251 KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGAL 310
+ P L+ L+ + E+A GG HS V++ G +
Sbjct: 196 EAELEPRLLEALQGLT------------------------MAEVAAGGWHSVCVSETGDI 231
Query: 311 LTFGWGLYGQRM--AKCLAGDG 330
+GW GQ + LA DG
Sbjct: 232 YIWGWNESGQLALPTRNLAEDG 253
>gi|417407323|gb|JAA50277.1| Putative rcc1 and btb domain-containing protein 2, partial
[Desmodus rotundus]
Length = 511
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 97/238 (40%), Gaps = 42/238 (17%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL K C G G LAT+E G++ TWG + L +G P
Sbjct: 75 PRRLDSLSGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYNQLGNGTTNHGSVPCH 130
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG ++G ST
Sbjct: 131 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGC-------------NNSGQVGSGSTAN 177
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--------------ASGDEFFTLS 202
Q +P R + + S A +S +SG+ +
Sbjct: 178 Q-PIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYVWGYNGNGQLGLGSSGNHS---T 233
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
PC + G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP ++
Sbjct: 234 PCRIAALQGIRVQRVACGYAHTLVLTDDGQVYAWGANSYGQLGTGNKSNQSYPTPVVV 291
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 31/148 (20%)
Query: 203 PCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP- 260
PC ++ N K + +VA G H+L+L+ G+V+ WG GQ+G GS P P +
Sbjct: 128 PCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGCNNSGQVGSGSTANQ-PIPRRVTG 186
Query: 261 CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------YVK 292
CL+ + A G+ + +V G V N +G+ G V+
Sbjct: 187 CLQNRVVVNIACGQMCSMAVVDSGEVYVWGYNGNGQLGLGSSGNHSTPCRIAALQGIRVQ 246
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ACG H+ V+TD G + +G YGQ
Sbjct: 247 RVACGYAHTLVLTDDGQVYAWGANSYGQ 274
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 41 PIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
PIP R+ G + V CG ++A +SG++ WG + GQ L S + TP
Sbjct: 179 PIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYVWG-YNGNGQLGLGSSGNHSTPCRI 237
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
V + A G+AH + +T+ G+VY WG
Sbjct: 238 AALQGIRVQRVACGYAHTLVLTDDGQVYAWG 268
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 54/124 (43%), Gaps = 29/124 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 67 GDIQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYNQLGNGT----- 121
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H +PC S N S K V E+ACG HS V+T G +
Sbjct: 122 -TNHGSVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEV-- 159
Query: 313 FGWG 316
F WG
Sbjct: 160 FAWG 163
>gi|440898467|gb|ELR49962.1| RCC1 and BTB domain-containing protein 1 [Bos grunniens mutus]
Length = 531
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 115/321 (35%), Gaps = 89/321 (27%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT S ++ LCG K + G
Sbjct: 28 GTSANEALYVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEV+ WG+ C G GS ST Q P K +KR
Sbjct: 144 AADGEVFAWGYNNC----------GQVGS---GSTANQ--------PTPRKVTNCLHIKR 182
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+ +A G ++ + D G+V+GWGY
Sbjct: 183 ----------------------------------VVGIACGQTSSMAVLDNGEVYGWGYN 208
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G GQLGLG+ + TP VR +++S V +I CG
Sbjct: 209 GNGQLGLGNNGNQL-TP------------------VRVAALHSVC------VNQIVCGYA 243
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
H+ +TD G L +G YGQ
Sbjct: 244 HTLALTDEGLLYAWGANTYGQ 264
>gi|414870472|tpg|DAA49029.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 469
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 94/260 (36%), Gaps = 71/260 (27%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA E G+L TWG + K +P P +V+AA G HC++V +
Sbjct: 89 SLAICEDGRLFTWGWNQRGTLGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHCLAVDDN 148
Query: 123 GEVYTWGWRECVPSAKVT--RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
G Y WG P+ VT ++G G P K G ++R
Sbjct: 149 GHAYAWGRGTRFPAFSVTGGNEYGQCGE-----------------EPERKEDGTRALRRD 191
Query: 181 KTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
+ R P +K+ +VAAGG H+++L+ G VW W
Sbjct: 192 IPTPQR---------------------CAPKLKVRQVAAGGTHSVVLTQEGHVWTW---- 226
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
GQ IK + TP + LE V+ IA G H
Sbjct: 227 -GQPWPPGDIKQISTPVRVQGLEK--------------------------VRVIAVGAFH 259
Query: 301 SAVVTDAGALLTFGWGLYGQ 320
+ +T+ G L +G YGQ
Sbjct: 260 NLALTEDGILWAWGNNEYGQ 279
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 116/298 (38%), Gaps = 64/298 (21%)
Query: 18 KETVVYMWG--YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
+E V+ WG + PG + S P R+ G + + V G LA +E G L W
Sbjct: 219 QEGHVWTWGQPWPPGDIKQIS-----TPVRVQGLEKVR-VIAVGAFHNLALTEDGILWAW 272
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYT---W 128
G+ + Y G P P+ E S+V AAG H ++T GE+ + +
Sbjct: 273 GNNE-----YGQLGTGDTQPRSHPIRVEGLSDLSLVDIAAGGWHSTALTIQGEINSLPCY 327
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
+R C ++ + +QK + + + R E
Sbjct: 328 LFRACFKDVQIIK-------YQKYT----------------------YYTMKVYAWGRGE 358
Query: 189 SENPASGDEFFT-LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
GD+ + + P V L G I +V+ GG H++ L+ G+++ +G G G+LG G
Sbjct: 359 HGRLGFGDDKSSRMVPLKVELLAGEDIVQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYG 418
Query: 248 SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
++ G D L + S + G+ K +ACGGRH+ +
Sbjct: 419 RKLTT-----------GQPMGVDIDLPPPK---TRSSRDGQWQAKYVACGGRHTLAIV 462
>gi|449280347|gb|EMC87674.1| RCC1 and BTB domain-containing protein 2, partial [Columba livia]
Length = 531
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 96/237 (40%), Gaps = 38/237 (16%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT +S I LCG G G LAT E G++ TWG S L +G
Sbjct: 60 GTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEE-GEVYTWGH---NAYSQLGNG 115
Query: 90 --KHGETPEPFPLP-TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
HG P V++ A G H + +T GEVYTWG + ++
Sbjct: 116 TTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWG-------------YNNS 162
Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP-------------- 192
G ST Q +P + + + S A E+
Sbjct: 163 GQVGSGSTANQ-PIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLG 221
Query: 193 ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
+SG++ +PC + G+++ +VA G HTL+L+D GQ++ WG GQLG G++
Sbjct: 222 SSGNQ---PTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNK 275
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 69/148 (46%), Gaps = 31/148 (20%)
Query: 203 PCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI-P 260
PC V+ N K+ +VA G H+++L+ G+V+ WGY GQ+G GS P P +
Sbjct: 123 PCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ-PIPRRVTS 181
Query: 261 CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------YVK 292
CL+ + A G+ + +V G V N +G+ G V+
Sbjct: 182 CLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQ 241
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ACG H+ V+TD G + +G YGQ
Sbjct: 242 RVACGYAHTLVLTDEGQIYAWGANSYGQ 269
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 70/175 (40%), Gaps = 26/175 (14%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S PIP R+ K V CG ++A E+G++ WG
Sbjct: 154 VYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGY- 212
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
G L G G P P + V + A G+AH + +T+ G++Y WG
Sbjct: 213 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWG------- 263
Query: 137 AKVTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
A S+ + TG +S + PT D+ TS+A+ +S
Sbjct: 264 ---------ANSYGQLGTGNKSNQSYPTTVVVDKDRVIEIAACHSAHTSAAKTQS 309
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 59/129 (45%), Gaps = 27/129 (20%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T+ P + G KI ++ G G H ++ ++ G+V+ WG+ QLG G+
Sbjct: 61 TGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGT---- 116
Query: 253 VPTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
T H +PC Q S N K V E+ACG HS V+T G +
Sbjct: 117 --TNHGFVPC---------------QVSTNLVNKK----VIEVACGSHHSMVLTSDGEVY 155
Query: 312 TFGWGLYGQ 320
T+G+ GQ
Sbjct: 156 TWGYNNSGQ 164
>gi|328872806|gb|EGG21173.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 900
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 128/344 (37%), Gaps = 85/344 (24%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
G + EK + + L G CG +LA +E G + ++G EGQ
Sbjct: 15 GHALEKDHLDPSVIQNLSGMRIVMSACGEA--HSLAVTEFGDVYSFGRGR-EGQLGHPEK 71
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG-WRECVPSAKVTRDFGSAGS 148
+ P + + A G H +++T+ G++Y WG E SAK +G
Sbjct: 72 YNTAHPNVITALAHERITRVACGNFHSLALTDTGKIYEWGQLHEIDKSAKGLE--APSGL 129
Query: 149 FQKDSTGKQSALPTE---QAPPSDKRA----GEEVVKRRKTSSAREESENPASGDEFF-- 199
+ G S + + Q DK A + + S+ E++E+ + DE F
Sbjct: 130 IEMKGIGFASRIAEQSLSQYLSGDKAAYDPTSKNISNVNSQSAQNEDAEDLTNKDEEFDA 189
Query: 200 -------------------------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
L+P LV ++ ++AG ++ ++ G+V+
Sbjct: 190 AAGSGGDDSQNEQKGKHIGKIVDRVQLTPLLVGSIKNQQVVDMSAGWAYSAAVTKSGKVF 249
Query: 235 GWGYGGEGQLGLGSR--------IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
WG+ +GQLGLG R +K H++
Sbjct: 250 TWGFNEKGQLGLGDRWFHGLPQQVKFFTNVHIVS-------------------------- 283
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ----RMAKCL 326
++CG +H V++D G L T+G G++GQ ++ CL
Sbjct: 284 -------VSCGRQHIGVISDQGDLFTWGLGVFGQLGHGKLKSCL 320
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 104/276 (37%), Gaps = 38/276 (13%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G ++ A ++SGK+ TWG +++GQ L P+ T +V + G H
Sbjct: 234 AGWAYSAAVTKSGKVFTWG-FNEKGQLGLGDRWFHGLPQQVKFFTNVHIVSVSCGRQHIG 292
Query: 118 SVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
+++ G+++TWG + C+ KV F A + A
Sbjct: 293 VISDQGDLFTWGLGVFGQLGHGKLKSCLHPKKVLA-FSEADQLNQKVRQVACGANFTMAL 351
Query: 167 PSDKR-------------AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK 213
D R A EE R + ++ P V VK
Sbjct: 352 TVDGRLWSFGHGEYGQLGATEENQYRDWNRGGNGNGNEREAHLQYAV--PQQVEALASVK 409
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASG 268
+ +V G HT+++++ V+ WG+G G LG G R K P +P L ++G
Sbjct: 410 VKQVTCGHLHTIVVTEDNDVYSWGWGASGCLGFGDR-KFQLVPQRVPALSGEIVSSISAG 468
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
+ L+VR + R+ + + +HS +V
Sbjct: 469 EKHSLVVRSTDTTTFAFDYRNLLND----KKHSDIV 500
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 54/126 (42%), Gaps = 20/126 (15%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GD +F P V V I V+ G +H ++SD G ++ WG G GQLG G ++K
Sbjct: 262 GDRWFHGLPQQVKFFTNVHIVSVSCGRQHIGVISDQGDLFTWGLGVFGQLGHG-KLKSCL 320
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
P + A + V+++ACG + +T G L +FG
Sbjct: 321 HPKKVLAFSEADQLNQK-------------------VRQVACGANFTMALTVDGRLWSFG 361
Query: 315 WGLYGQ 320
G YGQ
Sbjct: 362 HGEYGQ 367
>gi|291407336|ref|XP_002719873.1| PREDICTED: retinitis pigmentosa GTPase regulator-like [Oryctolagus
cuniculus]
Length = 882
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 106/263 (40%), Gaps = 83/263 (31%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G + A +E+G+L WG + EGQ L + + P + S + + G+ H
Sbjct: 147 AGSNTSAALTENGELFMWGD-NSEGQIGLKNVTNVCVPHQVTIGKPISWI--SCGYYHSA 203
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
VT GE+YT+G EC + G G LP EE++
Sbjct: 204 FVTMDGELYTFG--EC--------ENGKLG------------LP------------EELL 229
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
KT P LVT P K+ +VA GG HT++L++ V+ +G
Sbjct: 230 INHKT--------------------PQLVTRIPE-KVIQVACGGGHTVVLTET-IVYTFG 267
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
G GQLGLG+ I P I + KD + I+CG
Sbjct: 268 LGQFGQLGLGTFIFETSEPKAIEYI------KDHK------------------ISSISCG 303
Query: 298 GRHSAVVTDAGALLTFGWGLYGQ 320
H+A++T+ G + TFG G YG+
Sbjct: 304 ENHTALITELGRMYTFGDGRYGK 326
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 56/139 (40%), Gaps = 31/139 (22%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
C+ L P K+ VA G HTL+ ++ G V+ G +GQLGLG I +
Sbjct: 80 CVKALKPE-KVKYVACGRNHTLVSTEEGNVYATGGNNDGQLGLGDTEGRNTFYPISFFTS 138
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
H I L +A L G + NS G+ G V I+
Sbjct: 139 QHKIKQL--SAGSNTSAALTENGELFMWGDNSEGQIGLKNVTNVCVPHQVTIGKPISWIS 196
Query: 296 CGGRHSAVVTDAGALLTFG 314
CG HSA VT G L TFG
Sbjct: 197 CGYYHSAFVTMDGELYTFG 215
>gi|156120637|ref|NP_001095465.1| E3 ISG15--protein ligase HERC5 [Bos taurus]
gi|151555709|gb|AAI49082.1| HERC5 protein [Bos taurus]
Length = 958
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 30/219 (13%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADD----EGQSYLTSGKHGETPEPFPLPTEASV 106
K++ CG +LA S+ G+L WG D G+ + ++ TPE + +
Sbjct: 147 KNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTS----TPEIVENLSGVPL 202
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
V+ +AG AH ++++ +G VY+WG +C G ++ K+S AL ++
Sbjct: 203 VQISAGEAHSMALSMSGNVYSWGRNDC-------GQLGLGHTYNKESPSCIEALDDQKVE 255
Query: 167 -------PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ +V + N + L P LVT G ++T++A
Sbjct: 256 FLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNE----LRPRLVTGLVGNRVTQIAC 311
Query: 220 GGRHTL-ILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTP 256
G +HTL +SD G+V+ +G G EGQLG G+R +++P P
Sbjct: 312 GRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRP 350
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 28/136 (20%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAA 266
I ++ G H+L LS G+++ WG +GQLG+G TP + +P ++ +A
Sbjct: 148 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 207
Query: 267 SGKDRPLLVRQGSVNSSGK-------AGRSYVKE---------------IACGGRHSAVV 304
L G+V S G+ G +Y KE +ACGG H+A++
Sbjct: 208 GEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALL 267
Query: 305 TDAGALLTFGWGLYGQ 320
T +G + TFG G YGQ
Sbjct: 268 TKSGLVFTFGDGKYGQ 283
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 92/219 (42%), Gaps = 29/219 (13%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
E ++++ G H +++++ GE++ WG + V R F S + + S +P
Sbjct: 146 EKNIIQITCGDYHSLALSKGGELFAWG-QNLDGQLGVGRIFASTST--PEIVENLSGVPL 202
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + + S R + G + SP + K+ +A GG
Sbjct: 203 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGC 262
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
HT +L+ G V+ +G G GQLG ++ + RP LV
Sbjct: 263 HTALLTKSGLVFTFGDGKYGQLG-----------------HNSTQNELRPRLV------- 298
Query: 283 SGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQ 320
+G G V +IACG +H+ A V+D G + +FG G GQ
Sbjct: 299 TGLVGNR-VTQIACGRQHTLAYVSDTGKVFSFGSGKEGQ 336
>gi|431911480|gb|ELK13686.1| Putative E3 ubiquitin-protein ligase HERC5 [Pteropus alecto]
Length = 923
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 34/225 (15%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGET---PEPFPLPTEASVV 107
K++ CG +LA S+ G+L WG + GQ L GK ++ P+ + +
Sbjct: 36 KNIIQITCGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGKIFDSTTAPQIVEHLSGVPLA 92
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
+ +AG +H ++++ +G +Y+WG DFG G D S + +
Sbjct: 93 QISAGKSHSMALSVSGNIYSWG----------RNDFGQLGLGHTDDKDFPSLIEALENQK 142
Query: 168 SDKRA----------GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKV 217
+ A + +V + N + L PCLVT G ++T+V
Sbjct: 143 VEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNE----LRPCLVTKLAGNRVTQV 198
Query: 218 AAGGRHTL-ILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTPHLIP 260
A G +HTL +SD+G+V+ +G G EGQLG G+ +++P P +P
Sbjct: 199 ACGRQHTLAYVSDLGKVFSFGSGEEGQLGNGGTHNQLIPLPMKLP 243
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 56/121 (46%), Gaps = 25/121 (20%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T +P +V GV + +++AG H++ LS G ++ WG GQLGLG
Sbjct: 77 TTAPQIVEHLSGVPLAQISAGKSHSMALSVSGNIYSWGRNDFGQLGLGH----------- 125
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
KD P L+ V+ +ACGG H+A++T G + TFG G YG
Sbjct: 126 ------TDDKDFPSLIE--------ALENQKVEFLACGGSHTALLTKDGLVFTFGAGKYG 171
Query: 320 Q 320
Q
Sbjct: 172 Q 172
>gi|115476524|ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group]
gi|38175475|dbj|BAD01172.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
gi|113623827|dbj|BAF23772.1| Os08g0430700 [Oryza sativa Japonica Group]
gi|215734996|dbj|BAG95718.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640598|gb|EEE68730.1| hypothetical protein OsJ_27407 [Oryza sativa Japonica Group]
Length = 395
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 114/290 (39%), Gaps = 38/290 (13%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA G+L TWG + K +P P S+V+AA G HC++V +
Sbjct: 56 SLAICADGRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDK 115
Query: 123 GEVYTWG---WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
G Y WG + +C A+ D A ++D Q P + VV
Sbjct: 116 GRAYAWGGNEYGQCGEEAERKEDGTRA--LRRDIPIPQGCAPKLKVRQVAAGGTHSVVLT 173
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+ P GD +P V VK+ +A G H L L++ G +W WG
Sbjct: 174 QDGHVWTWGQPWP-PGDIKQISTPVRVQGLENVKV--IAVGAFHNLALTEDGILWAWGNN 230
Query: 240 GEGQLGLGS---RIKMVPTPHL--IPCLEHAASGKDRPLLVRQGSVNSSGK--------- 285
GQLG G R + + L + ++ AA G L ++G V + G+
Sbjct: 231 EYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFG 290
Query: 286 ---------------AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
AG + +++CGG HS +T G + ++G G +G+
Sbjct: 291 DDKSSHMVPQKVELLAGEDII-QVSCGGTHSVALTRDGRMFSYGRGDHGR 339
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 13/109 (11%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
D+ + P V L G I +V+ GG H++ L+ G+++ +G G G+LG G + V T
Sbjct: 292 DKSSHMVPQKVELLAGEDIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYG---RKVTT 348
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
H + + P+ + + G+ + +ACGGRH+ +
Sbjct: 349 GHPM----------EVPIDLPPPGTSGGDSGGQWQARYVACGGRHTLAI 387
>gi|449484061|ref|XP_002195626.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Taeniopygia
guttata]
Length = 526
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 96/237 (40%), Gaps = 38/237 (16%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT +S I LCG G G LAT E G++ TWG S L +G
Sbjct: 55 GTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEE-GEVYTWGH---NAYSQLGNG 110
Query: 90 --KHGETPEPFPLP-TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
HG P V++ A G H + +T GEVYTWG+ ++
Sbjct: 111 TTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGY-------------NNS 157
Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP-------------- 192
G ST Q +P + + + S A E+
Sbjct: 158 GQVGSGSTANQ-PIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLG 216
Query: 193 ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
+SG++ +PC + G+++ +VA G HTL+L+D GQ++ WG GQLG G++
Sbjct: 217 SSGNQ---PTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNK 270
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 69/148 (46%), Gaps = 31/148 (20%)
Query: 203 PCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI-P 260
PC V+ N K+ +VA G H+++L+ G+V+ WGY GQ+G GS P P +
Sbjct: 118 PCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ-PIPRRVTS 176
Query: 261 CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------YVK 292
CL+ + A G+ + +V G V N +G+ G V+
Sbjct: 177 CLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQ 236
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ACG H+ V+TD G + +G YGQ
Sbjct: 237 RVACGYAHTLVLTDEGQIYAWGANSYGQ 264
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 70/175 (40%), Gaps = 26/175 (14%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S PIP R+ K V CG ++A E+G++ WG
Sbjct: 149 VYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
G L G G P P + V + A G+AH + +T+ G++Y WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWG------- 258
Query: 137 AKVTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
A S+ + TG +S + PT D+ TS+A+ +S
Sbjct: 259 ---------ANSYGQLGTGNKSNQSYPTTVVVDKDRVIEIAACHSAHTSAAKTQS 304
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 59/129 (45%), Gaps = 27/129 (20%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T+ P + G KI ++ G G H ++ ++ G+V+ WG+ QLG G+
Sbjct: 56 TGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGT---- 111
Query: 253 VPTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
T H +PC Q S N K V E+ACG HS V+T G +
Sbjct: 112 --TNHGFVPC---------------QVSTNLVNKK----VIEVACGSHHSMVLTSDGEVY 150
Query: 312 TFGWGLYGQ 320
T+G+ GQ
Sbjct: 151 TWGYNNSGQ 159
>gi|440904418|gb|ELR54938.1| E3 ISG15--protein ligase HERC5, partial [Bos grunniens mutus]
Length = 1009
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 30/219 (13%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADD----EGQSYLTSGKHGETPEPFPLPTEASV 106
K++ CG +LA S+ G+L WG D G+ + ++ TPE + +
Sbjct: 122 KNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTS----TPEIVENLSGVPL 177
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
V+ +AG AH ++++ +G VY+WG +C G ++ KDS L ++
Sbjct: 178 VQISAGEAHSMALSMSGNVYSWGRNDC-------GQLGLGHTYNKDSPSCIETLDDQKVE 230
Query: 167 -------PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ +V + N + L P LVT G ++T++A
Sbjct: 231 FLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNE----LRPRLVTGLVGNRVTQIAC 286
Query: 220 GGRHTL-ILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTP 256
G +HTL +SD G+V+ +G G EGQLG G+R +++P P
Sbjct: 287 GRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRP 325
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 28/136 (20%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAA 266
I ++ G H+L LS G+++ WG +GQLG+G TP + +P ++ +A
Sbjct: 123 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 182
Query: 267 SGKDRPLLVRQGSVNSSGK-------AGRSYVKE---------------IACGGRHSAVV 304
L G+V S G+ G +Y K+ +ACGG H+A++
Sbjct: 183 GEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQKVEFLACGGCHTALL 242
Query: 305 TDAGALLTFGWGLYGQ 320
T +G + TFG G YGQ
Sbjct: 243 TKSGLVFTFGDGKYGQ 258
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 96/220 (43%), Gaps = 31/220 (14%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
E ++++ G H +++++ GE++ WG + V R F S + + S +P
Sbjct: 121 EKNIIQITCGDYHSLALSKGGELFAWG-QNLDGQLGVGRIFASTST--PEIVENLSGVPL 177
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSP-CLVTLNPGVKITKVAAGG 221
Q + + + S R + G + SP C+ TL+ K+ +A GG
Sbjct: 178 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQ-KVEFLACGG 236
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
HT +L+ G V+ +G G GQLG ++ + RP LV
Sbjct: 237 CHTALLTKSGLVFTFGDGKYGQLG-----------------HNSTQNELRPRLV------ 273
Query: 282 SSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQ 320
+G G V +IACG +H+ A V+D G + +FG G GQ
Sbjct: 274 -TGLVGNR-VTQIACGRQHTLAYVSDTGKVFSFGSGKEGQ 311
>gi|402869932|ref|XP_003898997.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
[Papio anubis]
Length = 1023
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 58/121 (47%), Gaps = 25/121 (20%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T +P +V GV + +++AG H++ LS G V+ WG GQLGLG
Sbjct: 178 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNVYSWGKNEFGQLGLG------------ 225
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
H S KD P L+ V+ +ACGG HSA++T G L TFG G +G
Sbjct: 226 ----HTES-KDSPSLIE--------ALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHG 272
Query: 320 Q 320
Q
Sbjct: 273 Q 273
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKH---GETPEPFPLPTEASVV 107
K + CG +LA S+ G+L WG + GQ L G+ TP+ +
Sbjct: 137 KKIIQITCGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRKFPSTTTPQIVEHLAGVPLA 193
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWREC------VPSAKVTRDFGSAGSFQKDST----GKQ 157
+ +AG AH ++++ +G VY+WG E +K + A QK G
Sbjct: 194 QISAGEAHSMALSMSGNVYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSH 253
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKV 217
SAL T+ AG K + ++E L PCLV G ++T++
Sbjct: 254 SALLTQDGLLFTFGAG----KHGQLGHNSTQNE----------LRPCLVAELVGNRVTQI 299
Query: 218 AAGGRHTL-ILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTP 256
A G HTL +SD+G+V+ +G G +GQLG G + +++P P
Sbjct: 300 ACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTLDQLIPLP 340
>gi|403377072|gb|EJY88530.1| hypothetical protein OXYTRI_12294 [Oxytricha trifallax]
Length = 709
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 121/317 (38%), Gaps = 82/317 (25%)
Query: 18 KETVVYMWG-YLPGTSPEKSP------ILSPIPARLCGGDSWKDVCGGGCG--FALATSE 68
KE VY+WG L ++S P+ + G K + CG +LA +
Sbjct: 188 KEGQVYVWGGSLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQI---DCGDFHSLALDD 244
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
+G L +WG + +G+ + ETP+ + + AG H +++T +VY W
Sbjct: 245 NGTLYSWGVGE-KGECGHGKFEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVYAW 303
Query: 129 G---WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS--DKRAGEEVVKRRKTS 183
G + +C G F+ + + P++ S D +E++
Sbjct: 304 GDGRYGQC-----------GFGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEIL------ 346
Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
EFF P KI ++AAG HTL+L+ GQ++ +GY +GQ
Sbjct: 347 -------------EFFKDPP---------KIKQIAAGEMHTLVLTSSGQIFSFGYNQQGQ 384
Query: 244 LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
LG + RP LV +G +N ++A G HS
Sbjct: 385 LG-----------------HNTVDNYCRPKLV-EGMLNHK-------TVQVAAGRNHSLC 419
Query: 304 VTDAGALLTFGWGLYGQ 320
+T+ + G YGQ
Sbjct: 420 LTNKNDVYACGNNQYGQ 436
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 135/333 (40%), Gaps = 50/333 (15%)
Query: 14 MEECKETVVYMWGYLPGTSPE-----KSPILSPIPARLCGGDSWKDV--CGGGCGFALAT 66
+++ K+ Y+W + T E + +L +P R+ G K + GG L T
Sbjct: 76 LDQIKKYHAYVWSFGQNTKGELGTGHYNEVL--MPERVRGLPKLKVIFLSSGGKHSGLVT 133
Query: 67 SESGKLITWGS--ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
E GKL GS D G +T+G +T +P L T+ + + A G H +++++ G+
Sbjct: 134 -EDGKLWMCGSNLHDKLGLEGITTGS-KKTFKPVELLTQIFIKQVACGDYHTLALSKEGQ 191
Query: 125 VYTWG----------WRECVPSAK----VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
VY WG +E +AK + + F Q D S +
Sbjct: 192 VYVWGGSLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDDNGTLYSW 251
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
GE K E+ E P + G IT++ AG HTL ++
Sbjct: 252 GVGE---KGECGHGKFEDQETPQR-----------IKFFDGKIITQIEAGNHHTLAITAD 297
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLL---VRQGSVNSSGKAG 287
QV+ WG G GQ G G + P L+ + G + L V+Q +
Sbjct: 298 NQVYAWGDGRYGQCGFGE-FENTAIPQLV---NFPSQGNNTSYLDDSVQQEILEFFKDPP 353
Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +K+IA G H+ V+T +G + +FG+ GQ
Sbjct: 354 K--IKQIAAGEMHTLVLTSSGQIFSFGYNQQGQ 384
>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
scrofa]
Length = 568
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 98/235 (41%), Gaps = 36/235 (15%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL K C G G LAT+E G++ TWG S L +G P
Sbjct: 106 PRRLDSLSGKKIACLSYGSGPHVVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 161
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG+ ++G ST
Sbjct: 162 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTAN 208
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA----SGDEFFTL-------SPCL 205
Q +P + + + S A ++ +G+ L +PC
Sbjct: 209 Q-PIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCR 267
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
+ G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP ++
Sbjct: 268 IAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVIV 322
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 157 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 215
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 216 TGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRIAALQGIR 275
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 276 VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 305
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 190 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWG-Y 248
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L SG + TP V + A G+AH + +T+ G+VY WG
Sbjct: 249 NGNGQLGLGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 299
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 98 GDVQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGT----- 152
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 153 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 192
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 193 WGYNNSGQ 200
>gi|296486689|tpg|DAA28802.1| TPA: hect domain and RLD 5 [Bos taurus]
Length = 963
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 30/219 (13%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADD----EGQSYLTSGKHGETPEPFPLPTEASV 106
K++ CG +LA S+ G+L WG D G+ + ++ TPE + +
Sbjct: 152 KNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTS----TPEIVENLSGVPL 207
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
V+ +AG AH ++++ +G VY+WG +C G ++ K+S AL ++
Sbjct: 208 VQISAGEAHSMALSMSGNVYSWGRNDC-------GQLGLGHTYNKESPSCIEALDDQKVE 260
Query: 167 -------PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ +V + N + L P LVT G ++T++A
Sbjct: 261 FLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNE----LRPRLVTGLVGNRVTQIAC 316
Query: 220 GGRHTL-ILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTP 256
G +HTL +SD G+V+ +G G EGQLG G+R +++P P
Sbjct: 317 GRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRP 355
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 28/136 (20%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAA 266
I ++ G H+L LS G+++ WG +GQLG+G TP + +P ++ +A
Sbjct: 153 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 212
Query: 267 SGKDRPLLVRQGSVNSSGK-------AGRSYVKE---------------IACGGRHSAVV 304
L G+V S G+ G +Y KE +ACGG H+A++
Sbjct: 213 GEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALL 272
Query: 305 TDAGALLTFGWGLYGQ 320
T +G + TFG G YGQ
Sbjct: 273 TKSGLVFTFGDGKYGQ 288
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 92/219 (42%), Gaps = 29/219 (13%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
E ++++ G H +++++ GE++ WG + V R F S + + S +P
Sbjct: 151 EKNIIQITCGDYHSLALSKGGELFAWG-QNLDGQLGVGRIFASTST--PEIVENLSGVPL 207
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + + S R + G + SP + K+ +A GG
Sbjct: 208 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGC 267
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
HT +L+ G V+ +G G GQLG ++ + RP LV
Sbjct: 268 HTALLTKSGLVFTFGDGKYGQLG-----------------HNSTQNELRPRLV------- 303
Query: 283 SGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQ 320
+G G V +IACG +H+ A V+D G + +FG G GQ
Sbjct: 304 TGLVGNR-VTQIACGRQHTLAYVSDTGKVFSFGSGKEGQ 341
>gi|324502737|gb|ADY41202.1| Serine/threonine-protein kinase Nek9 [Ascaris suum]
Length = 1038
Score = 62.0 bits (149), Expect = 4e-07, Method: Composition-based stats.
Identities = 57/198 (28%), Positives = 77/198 (38%), Gaps = 46/198 (23%)
Query: 167 PSDKRAGEEVVKRRKTSSARE---ESENPASGDEF--------------FTLSPCLVTLN 209
PS + A + V K R R E E P G TLSP + T
Sbjct: 426 PSARNALDMVRKNRNNGMKRRNVTEDEQPNEGISHNFARSAVYKFDVANITLSP-ITTFA 484
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI-----PCLEH 264
++I + A RH ++++ V+ WG GQLGLG R K P L+ C+
Sbjct: 485 ANIRIKQAALSERHQVVVTAERTVYAWGDNRHGQLGLGDR-KFRAEPALVESLTSKCVTK 543
Query: 265 AASG-------KDRPLLVRQGSVNSSGKAGRS---------------YVKEIACGGRHSA 302
A G DR + G+ SG GR V +IACG H+
Sbjct: 544 VAVGATFSLFCTDRGTALFCGNGKYSGDGGRDDDVLKPILIDSLLRVDVIDIACGDEHAV 603
Query: 303 VVTDAGALLTFGWGLYGQ 320
VV D G + +G GL G+
Sbjct: 604 VVADGGKVFVWGSGLNGR 621
Score = 38.9 bits (89), Expect = 3.9, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 27/121 (22%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLI 259
L P L+ V + +A G H ++++D G+V+ WG G G+LG G + + T I
Sbjct: 579 LKPILIDSLLRVDVIDIACGDEHAVVVADGGKVFVWGSGLNGRLGTGNANFVNIATQINI 638
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
P +Q VN + CG +A++T++G+++ G Y
Sbjct: 639 P--------------TQQIVVN------------VRCGPDATALLTNSGSIIAMGSNRYN 672
Query: 320 Q 320
+
Sbjct: 673 K 673
>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain containing
protein [Acanthamoeba castellanii str. Neff]
Length = 1563
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 107/262 (40%), Gaps = 52/262 (19%)
Query: 92 GETPEPFP-LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
G+ PF L + VV + GW HC ++TE G VYTWG GS
Sbjct: 862 GKLNVPFGGLVSMRQVVNVSCGWNHCAALTENGHVYTWGRN------------GSGELGH 909
Query: 151 KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS-----------GDEFF 199
D +G P +Q + +EVV + + AR ES + GD
Sbjct: 910 GDKSGVPQLHP-KQVIFFKSKCVKEVVCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTL 968
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP-H 257
P + + +T++AAG HT+++ G+V +G G GQLG G R + VPT
Sbjct: 969 HWLPVPIKTLRKMHVTQLAAGYAHTIVVLKSGEVMVFGGGEVGQLGTGMRKDLLVPTKLQ 1028
Query: 258 LIPCLEHAASGK-DRPLLVRQGSVNS-----SGKAGRS-------------------YVK 292
+P + AA G LL G V + SG+ G + ++
Sbjct: 1029 AMPSIVQAACGYCHTALLTEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKRIR 1088
Query: 293 EIACGGRHSAVVTDAGALLTFG 314
IACG H+ +TD + T+G
Sbjct: 1089 FIACGSFHTIAITDLDNVYTWG 1110
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P V + +V GG HTL ++ G V+GWG G GQLGLG R T H +P
Sbjct: 918 LHPKQVIFFKSKCVKEVVCGGEHTLARTESGSVYGWGNGRIGQLGLGDR-----TLHWLP 972
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P+ + + +V ++A G H+ VV +G ++ FG G GQ
Sbjct: 973 V----------PIKTLR----------KMHVTQLAAGYAHTIVVLKSGEVMVFGGGEVGQ 1012
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 124/328 (37%), Gaps = 82/328 (25%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA 114
VCGG LA +ESG + WG+ GQ L P P + V + AAG+A
Sbjct: 935 VCGGE--HTLARTESGSVYGWGNGRI-GQLGLGDRTLHWLPVPIKTLRKMHVTQLAAGYA 991
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE-QAPPSDKRAG 173
H + V ++GEV +G E G G+ + K +PT+ QA PS +A
Sbjct: 992 HTIVVLKSGEVMVFGGGEV----------GQLGTGMR----KDLLVPTKLQAMPSIVQAA 1037
Query: 174 ---------EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
E + SA A + L+P +V G +I +A G HT
Sbjct: 1038 CGYCHTALLTEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKRIRFIACGSFHT 1097
Query: 225 LILSDMGQVWGWG----YGGEGQLG-------------------LGSRIKMVPTPH---- 257
+ ++D+ V+ WG +G + +G RI +V H
Sbjct: 1098 IAITDLDNVYTWGGVQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKRISLVSCGHAHSV 1157
Query: 258 ----------------LIPCLEHAASG-------KDRPLLVRQGSVNSSGKAGRS--YVK 292
L P L SG + PLLV S G+ +S VK
Sbjct: 1158 ATTMDGEVYVWSSTGSLQPPLLLRGSGLSTASGTTEAPLLV---SAIPDGQDAKSKPVVK 1214
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQ 320
A G + VVT+ G L ++G G +GQ
Sbjct: 1215 HAAAGEEFTLVVTENGLLYSWGSGAFGQ 1242
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 93/233 (39%), Gaps = 32/233 (13%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
+P +L S G C AL T E+G++ T GSA GQ L + + P
Sbjct: 1023 VPTKLQAMPSIVQAACGYCHTALLT-EAGEVYTCGSAMS-GQ--LGHADNLQNDRLAPKM 1078
Query: 102 TE----ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-------SFQ 150
E + A G H +++T+ VYTWG + S R A S
Sbjct: 1079 VEGLNGKRIRFIACGSFHTIAITDLDNVYTWGGVQGTDSDGAMRQERKAAILKRVTPSIV 1138
Query: 151 KDSTGKQSALPT-EQAPPSDKRAGEEVVKRRKTSSA------REESENPASGDEFFTLSP 203
K GK+ +L + A EV T S R + ASG T +P
Sbjct: 1139 KGLMGKRISLVSCGHAHSVATTMDGEVYVWSSTGSLQPPLLLRGSGLSTASGT---TEAP 1195
Query: 204 CLVTLNPGVK-------ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
LV+ P + + AAG TL++++ G ++ WG G GQLGLG +
Sbjct: 1196 LLVSAIPDGQDAKSKPVVKHAAAGEEFTLVVTENGLLYSWGSGAFGQLGLGDQ 1248
>gi|291296242|ref|YP_003507640.1| chromosome condensation regulator RCC1 [Meiothermus ruber DSM 1279]
gi|290471201|gb|ADD28620.1| regulator of chromosome condensation RCC1 [Meiothermus ruber DSM
1279]
Length = 593
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 120/314 (38%), Gaps = 91/314 (28%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA-- 111
+ G F+ A +G++ +WG +Y G+ +P PT+AS++ A
Sbjct: 224 NTLAAGGYFSAAIKPNGQVWSWGD-----NTYGQLGRATTSPSD-STPTQASLINDAVSI 277
Query: 112 --GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
G H +++T G V T G R+ D+G G DS+G +A
Sbjct: 278 SLGEYHAIALTNDGRVVTLG-RD---------DYGQLGDGPGDSSGTHTA---------- 317
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
P D L G+K V AG H+L L+
Sbjct: 318 ----------------------PNLRDNI---------LPAGIKAVAVQAGRYHSLALTS 346
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVR-QGSV----- 280
G V+ WG GQLGLG+ +P LIP L A+G D L ++ GSV
Sbjct: 347 EGTVYAWGRNDVGQLGLGTITAPQESPALIPGLSDVIALAAGDDHTLALKADGSVWAWGD 406
Query: 281 NSSGKAGRSY---------------VKEIACGGRHSAVVTDAGALLTFGWGLYGQRMAKC 325
N +G+ G VK IA GG HS + G + T+G+ +GQ
Sbjct: 407 NPNGELGTGDITPYSVPTAVSNLPGVKAIAAGGNHSVALLADGTVRTWGYNNHGQL---- 462
Query: 326 LAGDGINMGSWVWV 339
G+G N S V V
Sbjct: 463 --GNGSNTNSNVPV 474
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 84/205 (40%), Gaps = 24/205 (11%)
Query: 63 ALATSESGKLITWGSADDEGQ----SYLTSGKH-GETPEPFPLPTEASVVKAAAGWAHCV 117
A+A + G+++T G DD GQ +SG H LP V AG H +
Sbjct: 284 AIALTNDGRVVTLGR-DDYGQLGDGPGDSSGTHTAPNLRDNILPAGIKAVAVQAGRYHSL 342
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE-V 176
++T G VY WG D G G + + AL + AG++
Sbjct: 343 ALTSEGTVYAWGR----------NDVGQLGLGTITAPQESPALIPGLSDVIALAAGDDHT 392
Query: 177 VKRRKTSSAREESENP----ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
+ + S +NP +GD P V+ PGVK +AAGG H++ L G
Sbjct: 393 LALKADGSVWAWGDNPNGELGTGDITPYSVPTAVSNLPGVK--AIAAGGNHSVALLADGT 450
Query: 233 VWGWGYGGEGQLGLGSRIK-MVPTP 256
V WGY GQLG GS VP P
Sbjct: 451 VRTWGYNNHGQLGNGSNTNSNVPVP 475
>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
PN500]
Length = 1626
Score = 62.0 bits (149), Expect = 4e-07, Method: Composition-based stats.
Identities = 75/271 (27%), Positives = 102/271 (37%), Gaps = 60/271 (22%)
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-SVVKAAAGWAHC-------VS 118
S+SGKL TWG EGQ Y G HG+ E P + ++ + C +S
Sbjct: 145 SQSGKLFTWG----EGQ-YGRLG-HGDE-ESISTPKQVVALANIPMKYVFCGGRSTIALS 197
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR-----AG 173
T +YTWG +FG G + D + LP A P KR AG
Sbjct: 198 HTAGSGLYTWG----------NNEFGQLG--RGDCGDDFTCLPESVAVPGAKRLVALDAG 245
Query: 174 EEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+S A R + GD P LV+ G + VA GG H+L L+
Sbjct: 246 ASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALGGGHSLALT 305
Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
G+++ WG G GQLG GS P + D P ++
Sbjct: 306 KAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFF------VDMPKII------------- 346
Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
I+ GG HS D G++ +G YG
Sbjct: 347 ----GISAGGYHSVAQLDDGSVYAWGMSDYG 373
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 54/134 (40%), Gaps = 33/134 (24%)
Query: 189 SENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
S N D++FT L P +I V AG H ++S G+++ WG G G+LG G
Sbjct: 112 SNNNNDDDKYFT------KLYPEERIILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGD 165
Query: 249 RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV--TD 306
+ + TP + L + +K + CGGR + + T
Sbjct: 166 E-ESISTPKQVVALANIP------------------------MKYVFCGGRSTIALSHTA 200
Query: 307 AGALLTFGWGLYGQ 320
L T+G +GQ
Sbjct: 201 GSGLYTWGNNEFGQ 214
>gi|301755358|ref|XP_002913533.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Ailuropoda melanoleuca]
Length = 1011
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 27/113 (23%)
Query: 210 PGV--KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
PG+ K+ +VA GG HT++L++ V+ +G G GQLGLG+ + P P +I EH
Sbjct: 249 PGIPEKVVQVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETPVPKVI---EHIKD 304
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
K + I CG H+A++TD G + TFG G +G+
Sbjct: 305 LK---------------------ISSIFCGENHTALITDLGLMYTFGDGRHGK 336
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 57/138 (41%), Gaps = 29/138 (21%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL- 262
C+ L P K+ A G HTL+ ++ G+V+ G EGQLGLG + + HLI
Sbjct: 90 CVKALKPE-KVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDER-NSFHLISFFT 147
Query: 263 ------EHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IAC 296
+ +A L G + NS G+ G + I+C
Sbjct: 148 SQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLKNITNVCVPQQVTVGKPISWISC 207
Query: 297 GGRHSAVVTDAGALLTFG 314
G HSA VT G L TFG
Sbjct: 208 GYYHSAFVTTEGELYTFG 225
>gi|10047261|dbj|BAB13419.1| KIAA1593 protein [Homo sapiens]
Length = 953
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 64/137 (46%), Gaps = 28/137 (20%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG+ K +P L IP ++ A
Sbjct: 33 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 92
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 93 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 152
Query: 304 VTDAGALLTFGWGLYGQ 320
+T G + TFG G YGQ
Sbjct: 153 LTKEGGVFTFGAGGYGQ 169
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 66/148 (44%), Gaps = 30/148 (20%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
SP L+ G+ +VAAGG H+ +L+ G ++GWG GQLGL P+L+
Sbjct: 76 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKS 134
Query: 262 LE-----HAASGKDR-PLLVRQGSVNSSGKAGR----------------------SYVKE 293
L + G+D L ++G V + G G S V E
Sbjct: 135 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTE 194
Query: 294 IACGGRH-SAVVTDAGALLTFGWGLYGQ 320
IACG +H SA V +G + +FG G GQ
Sbjct: 195 IACGRQHTSAFVPSSGRIYSFGLGGNGQ 222
>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
Length = 657
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 109/269 (40%), Gaps = 59/269 (21%)
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGE 124
+ G + TWG DD L G +G P + A + G H +V+ G
Sbjct: 23 THGGGVYTWGRGDD---GRLGHGDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGN 79
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS-------DKRAGEE-- 175
++TWG G + K G +S T + S D G
Sbjct: 80 LFTWG----------------GGMYGKLGHGNESGHSTPKRVDSLVGLAVVDIACGSRHT 123
Query: 176 -VVKRRKTSSAREESENPASGD---EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+V R + EN +G E +P L+ G ++ +++A G HT L+D G
Sbjct: 124 AIVTSRGCLYTWGDKENGVAGHGDTEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAG 183
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
+V+ WG G G+LG G+ + +P L+ L GK RP+
Sbjct: 184 EVYTWGEGKFGRLGHGAE-RNCHSPRLVETL----LGK-RPV------------------ 219
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+I+CGG HSAVVT G + TFG G +GQ
Sbjct: 220 -QISCGGFHSAVVTADGKMYTFGGGEHGQ 247
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 104/264 (39%), Gaps = 34/264 (12%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGW 113
D+ G A+ TS G L TWG ++ + + H TP+ + VV+ +A
Sbjct: 115 DIACGSRHTAIVTSR-GCLYTWGDKENGVAGHGDTEGHQYTPKLLERLSGKRVVQLSACG 173
Query: 114 AHCVSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
H +T+AGEVYTWG R C S ++ Q G SA+ T
Sbjct: 174 FHTGCLTDAGEVYTWGEGKFGRLGHGAERNC-HSPRLVETLLGKRPVQISCGGFHSAVVT 232
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
GE GD+ + P LV GV +T++ G
Sbjct: 233 ADGKMYTFGGGEH--------------GQLGHGDKVNKVKPTLVKDLDGVFLTQITCGWS 278
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE------HAASGKDRPLLVR 276
H++ L+ +V+ WG G G+LG G K V TP L+ L A+ + LV
Sbjct: 279 HSVALTSSHEVYTWGNGDHGKLGHGCG-KKVSTPQLVEKLVGQKVVCVASYNEHTACLVE 337
Query: 277 QGSVNSSGKAGRSYVKEIACGGRH 300
SVN+S + + +I G H
Sbjct: 338 PHSVNASRRHAPGTMVQIGAGYLH 361
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 104/275 (37%), Gaps = 57/275 (20%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVT 120
A S G L TWG G Y G E+ P ++ +VV A G H VT
Sbjct: 73 AVSSKGNLFTWG-----GGMYGKLGHGNESGHSTPKRVDSLVGLAVVDIACGSRHTAIVT 127
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
G +YTWG +E G AG D+ G Q P S KR +
Sbjct: 128 SRGCLYTWGDKE----------NGVAG--HGDTEGHQYT-PKLLERLSGKRVVQLSACGF 174
Query: 181 KTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
T + E G E SP LV G + +++ GG H+ +++
Sbjct: 175 HTGCLTDAGEVYTWGEGKFGRLGHGAERNCHSPRLVETLLGKRPVQISCGGFHSAVVTAD 234
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
G+++ +G G GQLG G ++ V +P LV+ +
Sbjct: 235 GKMYTFGGGEHGQLGHGDKVNKV-----------------KPTLVKD--------LDGVF 269
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQRMAKC 325
+ +I CG HS +T + + T+G G +G+ C
Sbjct: 270 LTQITCGWSHSVALTSSHEVYTWGNGDHGKLGHGC 304
>gi|42563438|ref|NP_186900.3| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
gi|110735845|dbj|BAE99899.1| hypothetical protein [Arabidopsis thaliana]
gi|332640299|gb|AEE73820.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
Length = 393
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 109/308 (35%), Gaps = 74/308 (24%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA + G + TWG + K P + +AA G HC++V +
Sbjct: 50 SLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQ 109
Query: 123 GEVYTWGWRE--------------------------CVPSAKVTRDFGSAGSFQKDSTGK 156
G Y WG E C P V R + G+ T +
Sbjct: 110 GRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTV-RQVAAGGTHSVVLTRE 168
Query: 157 QSALPTEQA-PPSDKRAGEEVVKRRKTSSAR-----------------------EESENP 192
Q PP D + V+ + + R E
Sbjct: 169 GHVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQL 228
Query: 193 ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T P V + + +AAGG H+ L+D G+V+GWG G G+LGLG K
Sbjct: 229 GTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDK- 287
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
+ ++P + + +D + +++CGG HS +T G + +
Sbjct: 288 --SSKMVPQKVNLLAEED--------------------IIQVSCGGTHSVALTRDGRIFS 325
Query: 313 FGWGLYGQ 320
FG G +G+
Sbjct: 326 FGRGDHGR 333
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 81/198 (40%), Gaps = 57/198 (28%)
Query: 18 KETVVYMWG--YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
+E V+ WG + PG + S +P R+ G ++ + + G LA E G+L+ W
Sbjct: 167 REGHVWTWGQPWPPGDIKQIS-----VPVRVQGLENVRLIAVGAF-HNLALEEDGRLLAW 220
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLP--TEASVVKAAAGWAHCVSVTEAGEVYTWGWRE- 132
G+ ++ GQ L +G T P P+ + ++V AAG H ++T+ GEVY WG E
Sbjct: 221 GN-NEYGQ--LGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEH 277
Query: 133 -------------CVP--------------------SAKVTRD----------FGSAGSF 149
VP S +TRD G G
Sbjct: 278 GRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYG 337
Query: 150 QKDSTGKQSALPTEQAPP 167
+K +TG+ LP + PP
Sbjct: 338 RKVTTGQPLELPIKIPPP 355
>gi|432863737|ref|XP_004070157.1| PREDICTED: E3 ISG15--protein ligase HERC5-like [Oryzias latipes]
Length = 892
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 28/137 (20%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI------PCLEHA 265
+ +++VA G RHT+ L+ GQV+ WG GQLGLG + + +P + P ++ +
Sbjct: 117 IPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCVRSLSGMPLVQVS 176
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRSYVKE-----------------IACGGRHSAV 303
A G L GSV N G+ G ++ I+CG H+A+
Sbjct: 177 AGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLKKTTSISCGKDHTAI 236
Query: 304 VTDAGALLTFGWGLYGQ 320
+T G + TFG G +GQ
Sbjct: 237 LTKHGTVFTFGSGQFGQ 253
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 45/254 (17%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEASVVKAAAGWAH 115
G +A ++ G++ TWG + GQ L GK G +P+ + +V+ +AG H
Sbjct: 125 GSRHTVALTKEGQVYTWGQ-NSRGQ--LGLGKKGCSISSPQCVRSLSGMPLVQVSAGGDH 181
Query: 116 CVSVTEAGEVYTWGWREC------------VPSAKVTRDFGSAGSFQKDSTGK-QSALPT 162
+++ +G V+ WG +C P++ + + S S GK +A+ T
Sbjct: 182 SFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLKKTTSI---SCGKDHTAILT 238
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
+ +G+ + +S+R E L P LV G K+T++A G
Sbjct: 239 KHGTVFTFGSGQ--FGQLGHNSSRNE------------LRPRLVAELWGAKVTRIACGRY 284
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIK-MVPTPHLIPCLEHAASGKDRPLLVR--QGS 279
HTL+L + +++ +G + QLG + VP P L+P + + LL R Q +
Sbjct: 285 HTLVLQENNKIYSFGCNDQNQLGRSNDSHPSVPLPVLLPQVYKCS------LLYREIQRT 338
Query: 280 VNSSGKAGRSYVKE 293
+S+ RS++++
Sbjct: 339 FSSASCLNRSFLEK 352
>gi|403352385|gb|EJY75705.1| hypothetical protein OXYTRI_02905 [Oxytricha trifallax]
Length = 923
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 118/308 (38%), Gaps = 68/308 (22%)
Query: 41 PIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGS---ADDEGQSYLTSGKHGETP 95
P P + G +++ CG + A +G L TWG + ++GQ E P
Sbjct: 304 PQPVQALYG---REIVQIDCGDFHSAALDGNGDLYTWGGGAPSYNKGQCGHGHNNALEYP 360
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WRECVPSAKVTRDFGSAGSFQKD 152
E + ++K A G H +++T E+Y +G + EC G F
Sbjct: 361 EKVKYLSSKRIIKVACGGFHTLALTSENELYGFGSGNYGEC-----------GNGEFMDT 409
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
S K P + K+ T E DE F L + L
Sbjct: 410 SKPKLIKFPNDHLD----------TKKNVTDDLEEYGH-----DEEFVLE---MYLKEQP 451
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+I AAGGRH+LI+++ G+++ +GYG GQLG +++ C AA
Sbjct: 452 QILDFAAGGRHSLIITNKGRLYSFGYGTNGQLG-----------NVVQC---AAGWNHSM 497
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
+L +G V S G G ++ G + S TF L + ++K AG
Sbjct: 498 ILTERGDVFSCGYGGHG---QLGHGDKESRT------QFTFVQSLGNKNISKIFAG---- 544
Query: 333 MGSWVWVT 340
GS WV
Sbjct: 545 -GSHSWVV 551
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 24/125 (19%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P VT G+ +++ HT +++ GQ+ G G+LG+ S + ++P
Sbjct: 189 LLPRFVTGVKGMTAKWISSSNHHTAMITQDGQIVVSGSSLHGKLGIESNKTNINKFQIVP 248
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
L+ R K+++CG H+ V+ + G + FG L+
Sbjct: 249 TLQ------------------------RKRAKQVSCGDYHTLVLIEDGTVYQFGGSLFKD 284
Query: 321 RMAKC 325
+ K
Sbjct: 285 KKDKI 289
>gi|395502432|ref|XP_003755585.1| PREDICTED: RCC1 domain-containing protein 1 [Sarcophilus harrisii]
Length = 357
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 83/196 (42%), Gaps = 38/196 (19%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTEA----SVVKAAAGW 113
G AL G++ TWG+ L HG E P P EA ++ + AAG
Sbjct: 149 GAEHALLLGGMGQVYTWGTG------RLGQLGHGALEAELVPRPVEALLGLAMAQVAAGG 202
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + V+EAG++Y WGW E A +R ++G S P + P +D
Sbjct: 203 WHSLCVSEAGDLYIWGWNESGQLALPSRTIAEREKTVAGASGLSSCSPEAKKPATD---- 258
Query: 174 EEVVKRRKTSSAREESENPASGD--EFFTLS--PCLVTLNPGVKITKVAAGGRHTLILSD 229
GD +F + P L+ L G ++ K + G RHT +++
Sbjct: 259 -------------------GDGDLAQFIAIQPFPALLDLPSGSEVIKASCGSRHTAVVTR 299
Query: 230 MGQVWGWGYGGEGQLG 245
G+++ WG+G GQLG
Sbjct: 300 DGELYTWGWGKYGQLG 315
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 57/122 (46%), Gaps = 12/122 (9%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI------KMVPTPHLIPCLEH 264
G+ + +VAAGG H+L +S+ G ++ WG+ GQL L SR + L C
Sbjct: 192 GLAMAQVAAGGWHSLCVSEAGDLYIWGWNESGQLALPSRTIAEREKTVAGASGLSSCSPE 251
Query: 265 A------ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
A G + Q S V + +CG RH+AVVT G L T+GWG Y
Sbjct: 252 AKKPATDGDGDLAQFIAIQPFPALLDLPSGSEVIKASCGSRHTAVVTRDGELYTWGWGKY 311
Query: 319 GQ 320
GQ
Sbjct: 312 GQ 313
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 27/121 (22%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLI 259
+ P L P +K ++ G H L+L MGQV+ WG G GQLG G+ ++VP
Sbjct: 130 MQPFSQPLCPDLKARQLVLGAEHALLLGGMGQVYTWGTGRLGQLGHGALEAELVP----- 184
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
RP+ G + ++A GG HS V++AG L +GW G
Sbjct: 185 -----------RPVEALLGLA----------MAQVAAGGWHSLCVSEAGDLYIWGWNESG 223
Query: 320 Q 320
Q
Sbjct: 224 Q 224
>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
Length = 4791
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 60/123 (48%), Gaps = 27/123 (21%)
Query: 200 TLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
+ P L+ V I KVA +GG+H L LS G V+ WG G +G+LG G+R+
Sbjct: 4005 VMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSY----- 4059
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
DRP LV G V +IACGG HSA +T AG L T+G G
Sbjct: 4060 ------------DRPKLVED-------LLGIEIV-DIACGGHHSAAITSAGWLYTWGKGR 4099
Query: 318 YGQ 320
YG+
Sbjct: 4100 YGR 4102
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
GD++ P L+ I KVA +GG+H L L+ G+V+ WG G +G+LG G+
Sbjct: 3019 GDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGN---- 3074
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
+ D+P L+ S K+ R +++IACG HSA + G L T
Sbjct: 3075 -------------CTTLDKPRLI------ESLKSKR--IRDIACGSGHSAAIASNGELYT 3113
Query: 313 FGWGLYGQ 320
+G G YG+
Sbjct: 3114 WGLGEYGR 3121
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 104/277 (37%), Gaps = 64/277 (23%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVT 120
ALA ++ GK+ +WG +D L G +P + + S + A G H ++
Sbjct: 3050 ALALTQDGKVFSWGEGED---GKLGHGNCTTLDKPRLIESLKSKRIRDIACGSGHSAAIA 3106
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
GE+YTWG G G T Q QA +G+ VV+
Sbjct: 3107 SNGELYTWG-------------LGEYGRLGHGDTATQMKPKLVQA-----LSGQRVVQVA 3148
Query: 181 KTSSAREESENPASG-------DEFFTL---------SPCLVTLNPGVKITKVAAGGRHT 224
S + A G +F L +P LV G+ + +V G + +
Sbjct: 3149 CGSRDAQTMSLTADGCVYTWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQVECGAQFS 3208
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L L+ G+VW WG G +LG G+ +H +P LV G
Sbjct: 3209 LALTKYGEVWTWGKGDYFRLGHGN--------------DHHVR---KPTLV-------EG 3244
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQR 321
G+ V +A G H VTD G + +G +GQ+
Sbjct: 3245 LRGKKIV-HVAVGALHCLAVTDTGQVYAWGDNDHGQQ 3280
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 53 KDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET-----PEPFPLPTEASV 106
+D+ CG G A+A++ G+L TWG + Y G HG+T P+ + V
Sbjct: 3093 RDIACGSGHSAAIASN--GELYTWGLGE-----YGRLG-HGDTATQMKPKLVQALSGQRV 3144
Query: 107 VKAAAGW--AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ 164
V+ A G A +S+T G VYTWG + K+ R GS G + + + L Q
Sbjct: 3145 VQVACGSRDAQTMSLTADGCVYTWGDGDF---GKLGRG-GSDGCYTPLLVDRLNGLGVVQ 3200
Query: 165 APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
+ + + + + G++ P LV G KI VA G H
Sbjct: 3201 VECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHC 3260
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRI 250
L ++D GQV+ WG GQ G G+ I
Sbjct: 3261 LAVTDTGQVYAWGDNDHGQQGNGTTI 3286
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + T H P ++ A G HCV+
Sbjct: 4185 GSQFSVALTRSGAVYTWGKGDYHRLGHGTD-DHVRRPRKVAALQGKKIISIATGSLHCVA 4243
Query: 119 VTEAGEVYTWG 129
++ GEV+TWG
Sbjct: 4244 CSDKGEVFTWG 4254
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 77/218 (35%), Gaps = 70/218 (32%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G PL ++ V+K
Sbjct: 4130 CGSGDAQTLCVTDDDNVWSWGDGD-----YGKLGRGGSDGCKVPLKIDSLAGLGVIKVEC 4184
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G V++T +G VYTWG G + + G
Sbjct: 4185 GSQFSVALTRSGAVYTWG----------------KGDYHRLGHG---------------- 4212
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ V + RK ++ + G KI +A G H + SD G
Sbjct: 4213 TDDHVRRPRKVAALQ------------------------GKKIISIATGSLHCVACSDKG 4248
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
+V+ WG EGQLG G+ + P L+ HA GK
Sbjct: 4249 EVFTWGDNDEGQLGDGT-TSALQRPRLV----HALQGK 4281
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 61/152 (40%), Gaps = 31/152 (20%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GD P L+ I +A G ++ LS G+++ WG G G+LG GS V
Sbjct: 544 GDNISHDEPKLIETLLEKNIIFIACGSTYSAALSASGELYTWGRGNYGRLGHGSN-DDVT 602
Query: 255 TPHLIPCLE-----HAA--SGKDRPLLVRQGSVNSS------GKAGRS------------ 289
P L+ L+ H A SG + L V + S GK GR
Sbjct: 603 VPTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGSDGSKTPKIVD 662
Query: 290 -----YVKEIACGGRHSAVVTDAGALLTFGWG 316
V + CGG+ SA +T G + T+G G
Sbjct: 663 KLLDINVVRVFCGGQFSAALTARGEVYTWGKG 694
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 58/145 (40%), Gaps = 29/145 (20%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-----RIKMVPTPH 257
P LV G++I +A GG H+ ++ G ++ WG G G+LG G R K+V
Sbjct: 4062 PKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQ 4121
Query: 258 LIPCLEHAASGKDRPLLVRQGSVN-------SSGKAGRS-----------------YVKE 293
++ A D L N GK GR V +
Sbjct: 4122 DYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIK 4181
Query: 294 IACGGRHSAVVTDAGALLTFGWGLY 318
+ CG + S +T +GA+ T+G G Y
Sbjct: 4182 VECGSQFSVALTRSGAVYTWGKGDY 4206
>gi|224589107|ref|NP_001139174.1| probable E3 ubiquitin-protein ligase HERC4-like [Danio rerio]
Length = 985
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 25/110 (22%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G+ + +++AGG H+ +LS G V+GWG GQLGLG T +P + + SGK
Sbjct: 170 GIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGD-----TTDRFVPTIVKSLSGKK 224
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
I+CGG H+A ++ G + TFG G +GQ
Sbjct: 225 --------------------TVSISCGGEHTATLSKGGTVFTFGSGGFGQ 254
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 98/243 (40%), Gaps = 57/243 (23%)
Query: 46 LCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD------EGQSYLTSGKHGETPEP 97
L G D+ K V CG ++A S G+L WG + Q+ + S +H ++
Sbjct: 112 LKGLDNTK-VIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCG 170
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF-QKDSTGK 156
P V + +AG H ++ +G V+ WG SAG D+T +
Sbjct: 171 IP------VAQISAGGNHSFVLSLSGVVFGWGS-------------NSAGQLGLGDTTDR 211
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL--------------- 201
+PT S K K S E + + G FT
Sbjct: 212 --FVPTIVKSLSGK-------KTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKD 262
Query: 202 --SPCLVTLNPGVKITKVAAGGRHTLILSDM-GQVWGWGYGGEGQLGLGSRIKM-VPTPH 257
P LV G K+++V G HTL+L + +++ +G G +GQLG G ++K VP P
Sbjct: 263 EHHPRLVAELWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQSVPLPV 322
Query: 258 LIP 260
L+P
Sbjct: 323 LLP 325
>gi|119574650|gb|EAW54265.1| hect domain and RLD 4, isoform CRA_e [Homo sapiens]
Length = 947
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 64/137 (46%), Gaps = 28/137 (20%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG+ K +P L IP ++ A
Sbjct: 27 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 86
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 87 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 146
Query: 304 VTDAGALLTFGWGLYGQ 320
+T G + TFG G YGQ
Sbjct: 147 LTKEGGVFTFGAGGYGQ 163
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 66/148 (44%), Gaps = 30/148 (20%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
SP L+ G+ +VAAGG H+ +L+ G ++GWG GQLGL P+L+
Sbjct: 70 SPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKS 128
Query: 262 LE-----HAASGKDR-PLLVRQGSVNSSGKAGR----------------------SYVKE 293
L + G+D L ++G V + G G S V E
Sbjct: 129 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTE 188
Query: 294 IACGGRH-SAVVTDAGALLTFGWGLYGQ 320
IACG +H SA V +G + +FG G GQ
Sbjct: 189 IACGRQHTSAFVPSSGRIYSFGLGGNGQ 216
>gi|355687448|gb|EHH26032.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
Length = 883
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 58/121 (47%), Gaps = 25/121 (20%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T +P +V GV + +++AG H++ LS G ++ WG GQLGLG
Sbjct: 112 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLG------------ 159
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
H S KD P L+ V+ +ACGG HSA++T G L TFG G +G
Sbjct: 160 ----HTES-KDSPSLIE--------ALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHG 206
Query: 320 Q 320
Q
Sbjct: 207 Q 207
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 48/215 (22%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEASVV---------KAAAGW 113
A + SG+L WG HG+ FP T +V + +AG
Sbjct: 85 ARTPSGELFAWGQ-----------NLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGE 133
Query: 114 AHCVSVTEAGEVYTWGWREC------VPSAKVTRDFGSAGSFQKDST----GKQSALPTE 163
AH ++++ +G +Y+WG E +K + A QK G SAL T+
Sbjct: 134 AHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQ 193
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
AG K + ++E L PCLV G ++T++A G H
Sbjct: 194 DGLLFTFGAG----KHGQLGHNSTQNE----------LRPCLVAELVGNRVTQIACGRWH 239
Query: 224 TL-ILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTP 256
TL +SD G+V+ +G G +GQLG G + +++P P
Sbjct: 240 TLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLP 274
>gi|260796835|ref|XP_002593410.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
gi|229278634|gb|EEN49421.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
Length = 538
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 85/208 (40%), Gaps = 32/208 (15%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L +++G L +WG G S L +G + P + T VVK A G H +++
Sbjct: 94 VLVCTDNGDLYSWGH---NGYSQLGNGSTNQGLSPQLITTNLIGRKVVKVACGSHHSLAL 150
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
T GEV+ WG+ C G GS T A P + A R E+
Sbjct: 151 TLEGEVFAWGYNNC----------GQVGS----GTTTNQATPRKVAACLGTRKVTEIACG 196
Query: 180 RKTSSAREESE-----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ +S A ++ G+ +PC V + + ++ G H + L+
Sbjct: 197 QTSSMALLDNGEVYGWGYNGNGQLGVGNNVNQPNPCRVAALQQMIVVQIVCGYAHAMALT 256
Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMV-PT 255
D G V+ WG GQLG G++ +V PT
Sbjct: 257 DEGSVYAWGANSYGQLGTGNKANLVTPT 284
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 65/149 (43%), Gaps = 29/149 (19%)
Query: 201 LSPCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
LSP L+T N G K+ KVA G H+L L+ G+V+ WGY GQ+G G+ +
Sbjct: 123 LSPQLITTNLIGRKVVKVACGSHHSLALTLEGEVFAWGYNNCGQVGSGTTTNQATPRKVA 182
Query: 260 PCL------EHAASGKDRPLLVRQGSV-----NSSGKAG-----------------RSYV 291
CL E A L+ G V N +G+ G + V
Sbjct: 183 ACLGTRKVTEIACGQTSSMALLDNGEVYGWGYNGNGQLGVGNNVNQPNPCRVAALQQMIV 242
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+I CG H+ +TD G++ +G YGQ
Sbjct: 243 VQIVCGYAHAMALTDEGSVYAWGANSYGQ 271
>gi|302753472|ref|XP_002960160.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
gi|300171099|gb|EFJ37699.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
Length = 435
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 110/295 (37%), Gaps = 53/295 (17%)
Query: 39 LSPIPARLCGGDSWKDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
++PI R+ +V G CG F + WG D L +P
Sbjct: 73 MAPIQGRMPAKPRLGNV-GVTCGLFHSVLFAEQDVFVWGKGDG---GRLGIDTEFNQYKP 128
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW------------RECVPSAKVTRDFGS 145
+ P V A+AG H +++TE G VYTWG+ RE +P ++
Sbjct: 129 YVNPRIKRVQMASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLP--RLLEGPWK 186
Query: 146 AGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCL 205
+ G +A TE +GE R R NP DE P
Sbjct: 187 DRIVHVSAGGSHTAAVTE--------SGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTK 238
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
V V I V GG T+ L+ GQ+W WG +LG G+R P ++ LE
Sbjct: 239 VQ-ALDVPIALVYCGGFFTMALTKSGQLWSWGGNANHELGHGTRANNW-KPKVVAALEDV 296
Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ ++ACGG H+A +T G ++T+G+G GQ
Sbjct: 297 T------------------------LVQVACGGFHAAALTQDGKVITWGYGGNGQ 327
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 101/256 (39%), Gaps = 35/256 (13%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
+A +E G + TWG + S + P P + +V +AG +H +VTE+G
Sbjct: 148 IALTEVGNVYTWGYGAFGALGH-GSYERELLPRLLEGPWKDRIVHVSAGGSHTAAVTESG 206
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
E+YTWG E + G+ + + + + + P + G S
Sbjct: 207 ELYTWGRDE----GEGRLGHGNPDIMDEGALSRPTKVQALDVPIALVYCGGFFTMALTKS 262
Query: 184 SAR-----EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
+ G P +V V + +VA GG H L+ G+V WGY
Sbjct: 263 GQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGY 322
Query: 239 GGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
GG GQLG G+ LE +GK+ P +V + + IACG
Sbjct: 323 GGNGQLGHGT-------------LE---NGKE-PAIVEAMADKTC--------TYIACGP 357
Query: 299 RHSAVVTDAGALLTFG 314
+A +T+ G L T+G
Sbjct: 358 AWTAAITENGDLYTWG 373
>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
vitripennis]
Length = 4752
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 60/123 (48%), Gaps = 27/123 (21%)
Query: 200 TLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
+ P L+ V I KVA +GG+H L LS G V+ WG G +G+LG G+RI
Sbjct: 3967 VMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRITY----- 4021
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
DRP L+ G V +IACGG HSA ++ AG L T+G G
Sbjct: 4022 ------------DRPKLIE-------ALLGTEIV-DIACGGHHSAAISSAGWLYTWGKGR 4061
Query: 318 YGQ 320
YG+
Sbjct: 4062 YGR 4064
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+K V +GG+H L L+ G+V+ WG G +G+LG G+R+ + D+
Sbjct: 3009 IKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNRVSL-----------------DK 3051
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K+ R +++IACG HSA + G L T+G G YG+
Sbjct: 3052 PRLIE------ALKSKR--IRDIACGSGHSAAIASNGELYTWGLGEYGR 3092
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 108/278 (38%), Gaps = 66/278 (23%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVT 120
ALA ++ GK+ +WG +D L G +P + S + A G H ++
Sbjct: 3021 ALALTQDGKVFSWGEGED---GKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIA 3077
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP-SDKRAGEEVV-- 177
GE+YTWG E +G G D+T T P D G+ V+
Sbjct: 3078 SNGELYTWGLGE----------YGRLG--HGDTT-------THLKPKLVDALVGQRVIQV 3118
Query: 178 ----KRRKTSSAREESENPASGDEFF----------TLSPCLVTLNPGVKITKVAAGGRH 223
+ +T + E+ + GD F SP V G+ + +V G +
Sbjct: 3119 ACGSRDAQTMALTEDGSVYSWGDGDFGKLGRGGSDGCYSPLPVDRLNGLGVVQVECGAQF 3178
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
+L L+ G+VW WG G +LG G+ +H RP LV
Sbjct: 3179 SLALTKYGEVWTWGKGDYFRLGHGN--------------DHHVR---RPTLVE------- 3214
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQR 321
G G+ V +A G H VTDAG + +G +GQ+
Sbjct: 3215 GLRGKKVV-HVAVGALHCLAVTDAGQVYAWGDNDHGQQ 3251
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 112/282 (39%), Gaps = 75/282 (26%)
Query: 53 KDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET-----PEPFPLPTEASV 106
+D+ CG G A+A++ G+L TWG + Y G HG+T P+ V
Sbjct: 3064 RDIACGSGHSAAIASN--GELYTWGLGE-----YGRLG-HGDTTTHLKPKLVDALVGQRV 3115
Query: 107 VKAAAGW--AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ 164
++ A G A +++TE G VY+WG DFG G + S G S LP
Sbjct: 3116 IQVACGSRDAQTMALTEDGSVYSWG----------DGDFGKLG--RGGSDGCYSPLPV-- 3161
Query: 165 APPSDKRAGEEVVKRR---KTSSA-----------REESENPASGDEFFTLSPCLVTLNP 210
D+ G VV+ + S A + + G++ P LV
Sbjct: 3162 ----DRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRRPTLVEGLR 3217
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G K+ VA G H L ++D GQV+ WG GQ G GS + + P L+ LE A
Sbjct: 3218 GKKVVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGSTM-VNRKPSLVHNLEDAK---- 3272
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA--VVTDAGAL 310
V +ACG HS V+TD L
Sbjct: 3273 --------------------VNRVACGSSHSIAWVLTDQPTL 3294
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 40 SPIPA-RLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
SP+P RL G + CG F+LA ++ G++ TWG D Y G +
Sbjct: 3157 SPLPVDRLNGLGVVQVECGAQ--FSLALTKYGEVWTWGKGD-----YFRLGHGNDHHVRR 3209
Query: 99 PLPTE----ASVVKAAAGWAHCVSVTEAGEVYTWG 129
P E VV A G HC++VT+AG+VY WG
Sbjct: 3210 PTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWG 3244
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 85/250 (34%), Gaps = 90/250 (36%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G P+ E+ VVK
Sbjct: 4092 CGSGDAQTLCVTDDDNVWSWGDGD-----YGKLGRGGSDGCKVPMKIESLAGLGVVKVEC 4146
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G V++T +G VYTWG G + + G
Sbjct: 4147 GSQFSVALTRSGAVYTWG----------------KGDYHRLGHG---------------- 4174
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ V + RK S+ + G KI +A G H + SD G
Sbjct: 4175 TDDHVRRPRKVSALQ------------------------GKKIVSIATGSLHCVACSDKG 4210
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
+V+ WG EGQLG G+ +P L+ HA GK+ +
Sbjct: 4211 EVYTWGDNDEGQLGDGT-THAQQSPRLV----HALQGKN--------------------I 4245
Query: 292 KEIACGGRHS 301
+ACG H+
Sbjct: 4246 TRVACGSAHT 4255
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 54/126 (42%), Gaps = 27/126 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
GD L P +VT G K+ VA +G TL ++D VW WG G G+LG G
Sbjct: 4068 GDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG----- 4122
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
+ G P+ + AG VK + CG + S +T +GA+ T
Sbjct: 4123 ------------GSDGCKVPMKIE-------SLAGLGVVK-VECGSQFSVALTRSGAVYT 4162
Query: 313 FGWGLY 318
+G G Y
Sbjct: 4163 WGKGDY 4168
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 43/100 (43%), Gaps = 25/100 (25%)
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
G+H L L+ G V+ WG G G+LG G P +I L DR
Sbjct: 510 GKHYLALTTKGIVYSWGNGDGGRLGHGDSFS-CDEPQVIEVLS------DRT-------- 554
Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V IACG +SA ++ G LLT+G G YG+
Sbjct: 555 ----------VTYIACGSTYSAAISSTGELLTWGRGSYGR 584
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 62/152 (40%), Gaps = 31/152 (20%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GD F P ++ + +T +A G ++ +S G++ WG G G+LG G +
Sbjct: 536 GDSFSCDEPQVIEVLSDRTVTYIACGSTYSAAISSTGELLTWGRGSYGRLGHGI-CDDIS 594
Query: 255 TPHLIPCLE-----HAA--SGKDRPLLVRQGSVNSS------GKAGR------------- 288
P ++ L H A SG + L V + S GK GR
Sbjct: 595 IPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDGDYGKLGRGGSDGSKLPKIVD 654
Query: 289 ----SYVKEIACGGRHSAVVTDAGALLTFGWG 316
V ++ CGG+ SA +T G + T+G G
Sbjct: 655 KLLDQNVVKVFCGGQFSAALTAHGEVYTWGKG 686
>gi|387541824|gb|AFJ71539.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
Length = 1023
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 58/121 (47%), Gaps = 25/121 (20%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T +P +V GV + +++AG H++ LS G ++ WG GQLGLG
Sbjct: 178 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLG------------ 225
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
H S KD P L+ V+ +ACGG HSA++T G L TFG G +G
Sbjct: 226 ----HTES-KDSPSLIE--------ALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHG 272
Query: 320 Q 320
Q
Sbjct: 273 Q 273
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 97/229 (42%), Gaps = 50/229 (21%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEASVV- 107
K + CG +LA S+ G+L WG HG+ FP T +V
Sbjct: 137 KKIIQITCGDYHSLALSKGGELFAWGQ-----------NLHGQLGVGRTFPSTTTPQIVE 185
Query: 108 --------KAAAGWAHCVSVTEAGEVYTWGWREC------VPSAKVTRDFGSAGSFQKDS 153
+ +AG AH ++++ +G +Y+WG E +K + A QK
Sbjct: 186 HLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVE 245
Query: 154 T----GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLN 209
G SAL T+ AG K + ++E L PCLV
Sbjct: 246 FLACGGSHSALLTQDGLLFTFGAG----KHGQLGHNSTQNE----------LRPCLVAEL 291
Query: 210 PGVKITKVAAGGRHTL-ILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTP 256
G ++T++A G HTL +SD G+V+ +G G +GQLG G + +++P P
Sbjct: 292 VGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLP 340
>gi|168024283|ref|XP_001764666.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684244|gb|EDQ70648.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 401
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 117/303 (38%), Gaps = 47/303 (15%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYL--TSGKHGETPEPFPLPTEASVVKAAAGW 113
CGG L +E G++ G +D GQ L ++G E E LP EA AAG
Sbjct: 49 CGGA--HTLVLTEEGRVYASG-LNDWGQLGLPLSTGHSMEFLEVEGLPDEAKFTHIAAGD 105
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ-----KDSTGKQSALPTEQAPPS 168
H +++E G VY WG R G + Q KD + AL E +
Sbjct: 106 FHSAAISEDGRVYMWGRNTQGQLGLGKRGKGKVCAAQWVESLKDFRIQALALGAEHSLAL 165
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTL-------SPCLVTLNPGVKITKVAAGG 221
+ EV+ + + R F++ +P LV VK++KVAAG
Sbjct: 166 SEEG--EVLSWGTSLNGRLGHGEGHRSSSMFSIFRKSSEYTPRLVKGFRDVKVSKVAAGL 223
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLG--------SRIKMVPTPHLIPCLEHAASGKDRPL 273
H+ L + G ++ +G G E QLGLG R+ ++P I C + R
Sbjct: 224 THSACLDEQGSLFTFGKGRECQLGLGGDRDISEPKRVPVIPPVEEIACGGYHTGAISRNG 283
Query: 274 LVRQGSVNSSGKAGRSY--------------------VKEIACGGRHSAVVTDAGALLTF 313
+ N G G Y V ++ CG +H+ +T G + +
Sbjct: 284 QLYMWGSNEYGCLGFGYKHQNATSLPMLVEGALESLRVTQVQCGWKHTMALTVDGDVFAW 343
Query: 314 GWG 316
GWG
Sbjct: 344 GWG 346
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 19/105 (18%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+ P++ P++ P+ CGG A S +G+L WGS + L G
Sbjct: 255 SEPKRVPVIPPVEEIACGGYH-----------TGAISRNGQLYMWGSNE---YGCLGFGY 300
Query: 91 HGETPEPFPLPTEAS-----VVKAAAGWAHCVSVTEAGEVYTWGW 130
+ P+ E + V + GW H +++T G+V+ WGW
Sbjct: 301 KHQNATSLPMLVEGALESLRVTQVQCGWKHTMALTVDGDVFAWGW 345
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 56/146 (38%), Gaps = 39/146 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-----------RIKMVPTPHLIP 260
+I +A G H+L LS+ G+V WG G+LG G R TP L+
Sbjct: 150 FRIQALALGAEHSLALSEEGEVLSWGTSLNGRLGHGEGHRSSSMFSIFRKSSEYTPRLVK 209
Query: 261 CLEH------AASGKDRPLLVRQGSVNSSGKAGRSY---------------------VKE 293
AA L QGS+ + GK GR V+E
Sbjct: 210 GFRDVKVSKVAAGLTHSACLDEQGSLFTFGK-GRECQLGLGGDRDISEPKRVPVIPPVEE 268
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYG 319
IACGG H+ ++ G L +G YG
Sbjct: 269 IACGGYHTGAISRNGQLYMWGSNEYG 294
>gi|384947464|gb|AFI37337.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
Length = 1023
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 58/121 (47%), Gaps = 25/121 (20%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T +P +V GV + +++AG H++ LS G ++ WG GQLGLG
Sbjct: 178 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLG------------ 225
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
H S KD P L+ V+ +ACGG HSA++T G L TFG G +G
Sbjct: 226 ----HTES-KDSPSLIE--------ALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHG 272
Query: 320 Q 320
Q
Sbjct: 273 Q 273
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 97/229 (42%), Gaps = 50/229 (21%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEASVV- 107
K + CG +LA S+ G+L WG HG+ FP T +V
Sbjct: 137 KKIIQITCGDYHSLALSKGGELFAWGQ-----------NLHGQLGVGRTFPSTTTPQIVE 185
Query: 108 --------KAAAGWAHCVSVTEAGEVYTWGWREC------VPSAKVTRDFGSAGSFQKDS 153
+ +AG AH ++++ +G +Y+WG E +K + A QK
Sbjct: 186 HLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVE 245
Query: 154 T----GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLN 209
G SAL T+ AG K + ++E L PCLV
Sbjct: 246 FLACGGSHSALLTQDGLLFTFGAG----KHGQLGHNSTQNE----------LRPCLVAEL 291
Query: 210 PGVKITKVAAGGRHTL-ILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTP 256
G ++T++A G HTL +SD G+V+ +G G +GQLG G + +++P P
Sbjct: 292 VGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLP 340
>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
[Strongylocentrotus purpuratus]
Length = 4064
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 63/121 (52%), Gaps = 27/121 (22%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG G +G+LG G+R +
Sbjct: 3256 TPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDGKLGHGNRTQC------- 3308
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
DRP ++ + GK V +IACGG HSA VT +G L T+G G YG
Sbjct: 3309 ----------DRPRVIE----SLRGKE----VIDIACGGAHSACVTSSGELYTWGKGRYG 3350
Query: 320 Q 320
+
Sbjct: 3351 R 3351
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 54/109 (49%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH + L+ G+V+ WG G +G+LG SR+ P L+ L
Sbjct: 2293 VKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHLSRMN-CEKPRLLEAL--------- 2342
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
K R +++IACG HSA VT +G L T+G G YG+
Sbjct: 2343 -------------KTKR--IRDIACGSSHSAAVTSSGELYTWGLGEYGR 2376
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 125/322 (38%), Gaps = 68/322 (21%)
Query: 19 ETVVYMWGYL-------PGTSPEKSPILSPIPARLCGGDSWKDVC-GGGCGFALATSESG 70
+T V++WG P S K+P+L+ + S K VC GG + G
Sbjct: 2205 QTKVFVWGLNDKDQLGGPRGSKIKTPVLNEFLS------SLKVVCCAGGSKSLFVVTAEG 2258
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEAGEVYTW 128
K+ G + G+ L S ++ + P+ ++ V K A +G H +++T G+V++W
Sbjct: 2259 KVYACGEGTN-GRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSW 2317
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
G D G G + + K L + KR + +++
Sbjct: 2318 G----------EGDDGKLGHLSRMNCEKPRLLEALKT----KRIRDIACGSSHSAAVTSS 2363
Query: 189 SE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGW 236
E GD L P LV G ++ +VA G R TL L+D G V+ W
Sbjct: 2364 GELYTWGLGEYGRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSW 2423
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G G G+LG G + PH + L N G V +I C
Sbjct: 2424 GDGDFGKLGRGGS-EGCSVPHNVERL------------------NGQG------VIQIEC 2458
Query: 297 GGRHSAVVTDAGALLTFGWGLY 318
G + S +T AG + T+G G Y
Sbjct: 2459 GAQFSLALTKAGQVWTWGKGDY 2480
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
VC CG F++A ++SG + TWG D + S H P ++ A G
Sbjct: 3428 VCKVECGSQFSIALTKSGCVYTWGKGDYHRLGH-GSDDHVRRPRKVAALQGKKIISIATG 3486
Query: 113 WAHCVSVTEAGEVYTWG 129
HCV+ ++ GEVYTWG
Sbjct: 3487 SLHCVACSDQGEVYTWG 3503
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 82/230 (35%), Gaps = 67/230 (29%)
Query: 39 LSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----E 93
L P A G DV CG G L S+ + +WG D Y G+ G +
Sbjct: 3361 LRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGD-----YGKLGRGGSDGCK 3415
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
P+ + V K G +++T++G VYTWG G + +
Sbjct: 3416 VPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWG----------------KGDYHRLG 3459
Query: 154 TGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK 213
G + + V + RK ++ + G K
Sbjct: 3460 HG----------------SDDHVRRPRKVAALQ------------------------GKK 3479
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I +A G H + SD G+V+ WG EGQLG G+ + P ++ L+
Sbjct: 3480 IISIATGSLHCVACSDQGEVYTWGDNDEGQLGDGT-TNAIQRPRIVTALQ 3528
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVKAAAGWA 114
G F+LA +++G++ TWG D Y G H P+ ++ A G
Sbjct: 2459 GAQFSLALTKAGQVWTWGKGD-----YFRLGHGTDSHVRKPQVAEGLKGKKIIHVAVGAL 2513
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+ G+V+ WG
Sbjct: 2514 HCLAVTDTGQVFAWG 2528
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 22/38 (57%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G KI VA G H L ++D GQV+ WG GQ G GS
Sbjct: 2502 GKKIIHVAVGALHCLAVTDTGQVFAWGDNDHGQQGDGS 2539
Score = 38.1 bits (87), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 27/110 (24%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+I +A G H+ ++ G+++ WG G G+LG G T L P L A GK
Sbjct: 2346 RIRDIACGSSHSAAVTSSGELYTWGLGEYGRLGHGD-----STTQLRPKLVKALVGK--- 2397
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGR--HSAVVTDAGALLTFGWGLYGQ 320
V ++ACG R + +TD G + ++G G +G+
Sbjct: 2398 -----------------RVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGK 2430
>gi|444911573|ref|ZP_21231747.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444717927|gb|ELW58746.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 708
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 121/314 (38%), Gaps = 50/314 (15%)
Query: 39 LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
L +P R+ G V GG G +LA G + WG+ + GQ L G EP
Sbjct: 49 LRRVPVRVLGLSGVVTVAAGG-GHSLAVHSDGTVWAWGN-NSSGQ--LGDGSFDNRAEPV 104
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS 158
+ + VV AAG H ++V+ G V+ WG G G D+ +
Sbjct: 105 RVRGLSGVVAVAAGGYHSLAVSADGTVWAWG----------NNSSGQLGDGSFDNRAEPV 154
Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP----ASGDEFFTLSPCLVTLNPGVKI 214
+ + G + R +N + EF + P V +++
Sbjct: 155 RVRGSSGVVAVAAGGAHSLAVRSDGILWAWGDNLYGQLGNRGEFNSSEPVQV-----LRV 209
Query: 215 T---KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASG 268
T V+AG H+L +S G VW WG GQLG+ ++ P +P + + A+G
Sbjct: 210 TGGVTVSAGANHSLAVSADGTVWAWGDNSHGQLGIARTTPLLSIPGRVPEVRGSVAMAAG 269
Query: 269 KDRPLLVR-QGSV-----NSSGKAGRSY---------------VKEIACGGRHSAVVTDA 307
+ L VR G+V N G+ G + V +A G HS V D
Sbjct: 270 DNHSLAVRDDGTVWAWGSNGHGQLGNGFMVDNSEPGRVPGLEGVGAVAAGSNHSLAVRDD 329
Query: 308 GALLTFGWGLYGQR 321
G + +G + GQR
Sbjct: 330 GTVWAWGSNVEGQR 343
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 116/324 (35%), Gaps = 65/324 (20%)
Query: 11 NEKMEECKETVVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCG-----GGCGF 62
N + + V+ WG + +P+LS IP R+ +V G G
Sbjct: 220 NHSLAVSADGTVWAWGDNSHGQLGIARTTPLLS-IPGRV------PEVRGSVAMAAGDNH 272
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA + G + WGS G L +G + EP +P V AAG H ++V +
Sbjct: 273 SLAVRDDGTVWAWGS---NGHGQLGNGFMVDNSEPGRVPGLEGVGAVAAGSNHSLAVRDD 329
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
G V+ WG + V G D T Q + PT S V
Sbjct: 330 GTVWAWG-------SNVEGQRG-------DGTTGQLSAPTRVPGVSGVVGVAANVFHSLA 375
Query: 183 SSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
SA + + GD SP V ++ ++ VAAG H+L L G V W
Sbjct: 376 VSADGSAWAWGHNSHGELGDGSTRNSPAPVRVDGLKEVVAVAAGSSHSLALLADGTVLAW 435
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G GQLG G+R H +P G V +A
Sbjct: 436 GDNTFGQLGDGTRAS-----HSVPAQVRGLRG----------------------VVAVAA 468
Query: 297 GGRHSAVVTDAGALLTFGWGLYGQ 320
G HS + G + T+G+ L GQ
Sbjct: 469 GSSHSLALLADGTVWTWGYNLNGQ 492
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 76/202 (37%), Gaps = 22/202 (10%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA G + TWG + GQ L G EP + VV AAG H ++
Sbjct: 469 GSSHSLALLADGTVWTWGY-NLNGQ--LGDGTTTYRYEPVAVKGLEGVVAVAAGGNHSLA 525
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
V G + WG V G D T P E + A + +
Sbjct: 526 VRSDGTAWAWG-------ENVKGQLG-------DGTLTSRPAPVEVKAAAKAVAAAQGLS 571
Query: 179 RRKTSS----AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
S A + + GD T P + + ++ VAAG H+L LS G VW
Sbjct: 572 LAVGSDGFPWAWGNNSSGQLGDGSTTSRPMPMRVQGAGEVVAVAAGNGHSLALSPEGGVW 631
Query: 235 GWGYGGEGQLGLGS-RIKMVPT 255
WG GQLG G+ ++ PT
Sbjct: 632 AWGQNARGQLGEGTLDRRLAPT 653
>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
rotundata]
Length = 4755
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L LS G V+ WG G +G+LG G+R+ DR
Sbjct: 3983 VKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSY-----------------DR 4025
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + G V ++ACGG HSA +T AG L T+G G YG+
Sbjct: 4026 PKLIEE-------LLGTEIV-DVACGGHHSAAITSAGWLYTWGKGRYGR 4066
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+K V +GG+H L L+ G+V+ WG G +G+LG G+ S D+
Sbjct: 2996 IKKVAVHSGGKHALALTQDGRVFSWGEGEDGKLGHGN-----------------CSSLDK 3038
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ S K+ R ++++ACG HSA +T +G L T+G G YG+
Sbjct: 3039 PRLIE------SLKSKR--IRDVACGSGHSAAITSSGELYTWGLGEYGR 3079
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 106/277 (38%), Gaps = 64/277 (23%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVT 120
ALA ++ G++ +WG +D L G +P + + S + A G H ++T
Sbjct: 3008 ALALTQDGRVFSWGEGED---GKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAIT 3064
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV--- 177
+GE+YTWG G G T Q Q+ G+ V+
Sbjct: 3065 SSGELYTWG-------------LGEYGRLGHGDTNTQLKPKLVQS-----LVGQRVIQVA 3106
Query: 178 ---KRRKTSSAREESENPASGDEFF----------TLSPCLVTLNPGVKITKVAAGGRHT 224
+ +T + + + GD F +P LV G+ + ++ G + +
Sbjct: 3107 CGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQIECGAQFS 3166
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L L+ G+VW WG G +LG G+ +H +P LV G
Sbjct: 3167 LALTKYGEVWTWGKGDYFRLGHGN--------------DHHVR---KPTLVE-------G 3202
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQR 321
G+ + +A G H VTD G + +G +GQ+
Sbjct: 3203 LRGKKVI-HVAVGALHCLAVTDTGQVYAWGDNDHGQQ 3238
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 126/324 (38%), Gaps = 62/324 (19%)
Query: 14 MEECKETVVYMWGY--------LPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFAL 64
+E + + VY+WG L G S K P+ S ++L K V GG
Sbjct: 2903 VETPQHSAVYVWGLNDKDQLGGLKG-SKIKLPVYSESLSKL------KPVHIAGGSKTLF 2955
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEA 122
S+ GKL G + G+ L + P+P P ++ + K A +G H +++T+
Sbjct: 2956 VVSQEGKLYACGEGTN-GRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQD 3014
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
G V++WG E G G S K + + ++ A T
Sbjct: 3015 GRVFSWGEGE----------DGKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAIT 3064
Query: 183 SSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVW 234
SS E GD L P LV G ++ +VA G R T+ L+ G V+
Sbjct: 3065 SSGELYTWGLGEYGRLGHGDTNTQLKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVY 3124
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
WG G G+LG G + G PLLV + +N G V +I
Sbjct: 3125 SWGDGDFGKLGRG-----------------GSDGCYTPLLVDR--LNGLG------VVQI 3159
Query: 295 ACGGRHSAVVTDAGALLTFGWGLY 318
CG + S +T G + T+G G Y
Sbjct: 3160 ECGAQFSLALTKYGEVWTWGKGDY 3183
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 105/274 (38%), Gaps = 72/274 (26%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET-----PEPFPLPTEASVVKAAAGW 113
G G + A + SG+L TWG + Y G HG+T P+ V++ A G
Sbjct: 3056 GSGHSAAITSSGELYTWGLGE-----YGRLG-HGDTNTQLKPKLVQSLVGQRVIQVACGS 3109
Query: 114 --AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
A +++T G VY+WG DFG G + S G + L D+
Sbjct: 3110 RDAQTMALTADGSVYSWG----------DGDFGKLG--RGGSDGCYTPLLV------DRL 3151
Query: 172 AGEEVVKRR---KTSSA-----------REESENPASGDEFFTLSPCLVTLNPGVKITKV 217
G VV+ + S A + + G++ P LV G K+ V
Sbjct: 3152 NGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHV 3211
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
A G H L ++D GQV+ WG GQ G GS I + P L+ L+ A
Sbjct: 3212 AVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTI-VNKKPSLVHELDDAR----------- 3259
Query: 278 GSVNSSGKAGRSYVKEIACGGRHSA--VVTDAGA 309
V ++CG HS V+TD A
Sbjct: 3260 -------------VNRVSCGSSHSIAWVLTDQPA 3280
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + T H P ++ A G HCV+
Sbjct: 4149 GSQFSVALTRSGSIYTWGKGDYHRLGHGTD-DHVRRPRKVAALQGKKIISIATGSLHCVA 4207
Query: 119 VTEAGEVYTWG 129
++ GEV+TWG
Sbjct: 4208 CSDKGEVFTWG 4218
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 76/218 (34%), Gaps = 70/218 (32%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G P+ E+ V+K
Sbjct: 4094 CGSGDAQTLCVTDDDNVWSWGDGD-----YGKLGRGGSDGCKVPMKIESLAGLGVIKVEC 4148
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G V++T +G +YTWG G + + G
Sbjct: 4149 GSQFSVALTRSGSIYTWG----------------KGDYHRLGHG---------------- 4176
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ V + RK ++ + G KI +A G H + SD G
Sbjct: 4177 TDDHVRRPRKVAALQ------------------------GKKIISIATGSLHCVACSDKG 4212
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
+V+ WG EGQLG G+ + P L HA GK
Sbjct: 4213 EVFTWGDNDEGQLGDGTTCALQR-----PRLVHALQGK 4245
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 31/152 (20%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMV 253
GD + P L+ IT +A G ++ LS G+++ WG G G+LG G S MV
Sbjct: 541 GDRTWYEEPKLIESLVDKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDVMV 600
Query: 254 PTP------HLIPCLEHAASGKDRPLLVRQGSVNSS------GKAGRS------------ 289
PT H+I + SG + L V + S GK GR
Sbjct: 601 PTLVSALNGHMIVYVA-CGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGCNGSKTPKIVD 659
Query: 290 -----YVKEIACGGRHSAVVTDAGALLTFGWG 316
V ++ CGG+ SA +T G + T+G G
Sbjct: 660 KLLDINVAKVYCGGQFSAALTAYGEVYTWGKG 691
>gi|159036719|ref|YP_001535972.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157915554|gb|ABV96981.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 553
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 100/264 (37%), Gaps = 45/264 (17%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LA + +G ++ WG + EGQ S TP LPT V AAG H +++T AG
Sbjct: 100 LALTSAGTVLAWGR-NIEGQLGNGSTTSSSTPVAVSLPTGTRAVAVAAGADHSLALTSAG 158
Query: 124 EVYTWGWRECVPSAKVTRDFGSA--GSFQKDSTGKQSALP--TEQAPPSDKRAGEEVVKR 179
+ WG FG GS ST +LP T A + R V+
Sbjct: 159 TILAWG----------DNTFGQLGDGSTTDRSTPVAVSLPAGTTVAAIAAGRDHNLVLTS 208
Query: 180 RKTSS---AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ + G +P VTL PGV +T VA G H+L+L+ W
Sbjct: 209 TGPTLLTWGKNTRGQLGDGTTTGRDTPVAVTLPPGVTVTSVAGGRDHSLVLTSDDTALAW 268
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G GQLG G+ T L+P +G + IA
Sbjct: 269 GGNSFGQLGNGTT-----TDSLVPIAVALPTGTE--------------------ATAIAA 303
Query: 297 GGRHSAVVTDAGALLTFGWGLYGQ 320
G HSA +T GA F WG G+
Sbjct: 304 GRLHSAALTSEGA--AFAWGHNGR 325
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 78/195 (40%), Gaps = 14/195 (7%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA + +G ++ WG + GQ S TP LP +V AAG H +
Sbjct: 147 GADHSLALTSAGTILAWGD-NTFGQLGDGSTTDRSTPVAVSLPAGTTVAAIAAGRDHNLV 205
Query: 119 VTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP--TEQAPPSDKRAGEE 175
+T G + TWG K TR G+ T LP + R
Sbjct: 206 LTSTGPTLLTWG--------KNTRGQLGDGTTTGRDTPVAVTLPPGVTVTSVAGGRDHSL 257
Query: 176 VVKRRKTSSA--REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
V+ T+ A +G +L P V L G + T +AAG H+ L+ G
Sbjct: 258 VLTSDDTALAWGGNSFGQLGNGTTTDSLVPIAVALPTGTEATAIAAGRLHSAALTSEGAA 317
Query: 234 WGWGYGGEGQLGLGS 248
+ WG+ G GQLG GS
Sbjct: 318 FAWGHNGRGQLGNGS 332
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 53/134 (39%), Gaps = 32/134 (23%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P V+L G + VAAG H+L L+ G + WG GQLG GS
Sbjct: 129 TPVAVSLPTGTRAVAVAAGADHSLALTSAGTILAWGDNTFGQLGDGSTTD---------- 178
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAG-ALLTFGWGLYGQ 320
R V S AG + V IA G H+ V+T G LLT+G GQ
Sbjct: 179 --------------RSTPVAVSLPAG-TTVAAIAAGRDHNLVLTSTGPTLLTWGKNTRGQ 223
Query: 321 RMAKCLAGDGINMG 334
GDG G
Sbjct: 224 L------GDGTTTG 231
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 83/224 (37%), Gaps = 34/224 (15%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQ--SYLTSGKHGETPEP 97
+P+ L G + + G + TS L+TWG + GQ T+G+ +TP
Sbjct: 181 TPVAVSLPAGTTVAAIAAGRDHNLVLTSTGPTLLTWGK-NTRGQLGDGTTTGR--DTPVA 237
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
LP +V A G H + +T WG FG G + T
Sbjct: 238 VTLPPGVTVTSVAGGRDHSLVLTSDDTALAWGGNS----------FGQLG----NGTTTD 283
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA----------SGDEFFTLSPCLVT 207
S +P A P+ A R +++ E A +G + P V+
Sbjct: 284 SLVPIAVALPTGTEATAIAAGRLHSAALTSEGAAFAWGHNGRGQLGNGSTTDSSEPVAVS 343
Query: 208 LNPGVKITKVAAGGR---HTLILSDMGQVWGWGYGGEGQLGLGS 248
L ++T +A GR H + ++ G WG G+LG GS
Sbjct: 344 LPADTRLTAIA--GRDSDHNVTITSAGAALAWGANANGELGDGS 385
>gi|355749435|gb|EHH53834.1| E3 ISG15--protein ligase HERC5 [Macaca fascicularis]
Length = 854
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 58/121 (47%), Gaps = 25/121 (20%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T +P +V GV + +++AG H++ LS G ++ WG GQLGLG
Sbjct: 104 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLG------------ 151
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
H S KD P L+ V+ +ACGG HSA++T G L TFG G +G
Sbjct: 152 ----HTES-KDSPSLIE--------ALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHG 198
Query: 320 Q 320
Q
Sbjct: 199 Q 199
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 26/163 (15%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWREC------VPSAKVTRDFGSAGSFQKDST----G 155
+ + +AG AH ++++ +G +Y+WG E +K + A QK G
Sbjct: 118 LAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGG 177
Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
SAL T+ AG K + ++E L PCLV G ++T
Sbjct: 178 SHSALLTQDGLLFTFGAG----KHGQLGHNSTQNE----------LRPCLVAELVGNRVT 223
Query: 216 KVAAGGRHTL-ILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTP 256
++A G HTL +SD G+V+ +G G +GQLG G + +++P P
Sbjct: 224 QIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLP 266
>gi|410208768|gb|JAA01603.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
gi|410264078|gb|JAA20005.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
gi|410293804|gb|JAA25502.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
gi|410338541|gb|JAA38217.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
Length = 527
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 116/321 (36%), Gaps = 89/321 (27%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEV+ WG+ C G GS ST Q P K +KR
Sbjct: 144 AADGEVFAWGYNNC----------GQVGS---GSTANQ--------PTPRKVTNCLHIKR 182
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+ +A G ++ + D G+V+GWGY
Sbjct: 183 ----------------------------------VVGIACGQTSSMAVLDNGEVYGWGYN 208
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G GQLGLG+ + TP VR +++S V +I CG
Sbjct: 209 GNGQLGLGNNGNQL-TP------------------VRVAALHSVC------VNQIVCGYA 243
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
H+ +TD G L +G YGQ
Sbjct: 244 HTLALTDEGLLYAWGANTYGQ 264
>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
Length = 1052
Score = 61.6 bits (148), Expect = 5e-07, Method: Composition-based stats.
Identities = 79/325 (24%), Positives = 115/325 (35%), Gaps = 62/325 (19%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP--TEASVVKAAAGWA 114
CG L + SGK+ GS D Y G + P +P + + + A G
Sbjct: 42 ACGHRHTLFLTASGKVYACGSND-----YAQLGHELSSKRPLQIPELVDCVITQIACGSR 96
Query: 115 HCVSVTEAGEVYTWGWREC-----------VPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
H +++TE G+V +WG EC V K R S Q S T
Sbjct: 97 HSMALTEWGQVLSWGDNECGQLGHASDQDVVQLPKTVRALVSKTVVQIACGNNHSLALT- 155
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
G + + + E + A P L+T G+ + +A GG H
Sbjct: 156 -CCGELYAWGSNIYGQLGVKTPSELGQCNA---------PMLLTTLLGIPVRAIACGGNH 205
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC----LEHAASGKD-RPLLVRQG 278
+ ++S V+GWG GQLGL L + A G + L +G
Sbjct: 206 SFLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEG 265
Query: 279 SVNSSGKAGR----------------------SYVKEIACGGRHS-AVVTDAGALLTFGW 315
V + G S + ++ACG RH+ A+V G + FG
Sbjct: 266 GVFTCGAGAYGQLGHGFCGNEMLPRMVMELMGSTISQVACGNRHTLAMVPARGRIYGFGL 325
Query: 316 GLYGQ---RMAKCLAGDGINMGSWV 337
G GQ R K L + +G WV
Sbjct: 326 GSSGQLGTRNTKSLNLPQMVIGPWV 350
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 28/147 (19%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHL 258
L+P + P + ++A G RHTL L+ G+V+ G QLG L S+ + + P L
Sbjct: 25 LTPSKMPWQPDSAVNQIACGHRHTLFLTASGKVYACGSNDYAQLGHELSSK-RPLQIPEL 83
Query: 259 IPCL--EHAASGKDRPLLVRQGSV-----NSSGKAGRS------------------YVKE 293
+ C+ + A + L G V N G+ G + V +
Sbjct: 84 VDCVITQIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVVQLPKTVRALVSKTVVQ 143
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQ 320
IACG HS +T G L +G +YGQ
Sbjct: 144 IACGNNHSLALTCCGELYAWGSNIYGQ 170
>gi|405960252|gb|EKC26193.1| RCC1 domain-containing protein 1 [Crassostrea gigas]
Length = 422
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 67/149 (44%), Gaps = 31/149 (20%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP----- 256
PCLV GV++ V AGG H++ +S++G ++ WG+ GQLGL R +P
Sbjct: 201 QPCLVEDLTGVRMKCVGAGGWHSMAISELGDLYVWGWNESGQLGLPCRNISTQSPPAEER 260
Query: 257 HLIPC------------------LEHAASGKDRPLLVRQGSVNSSGK-------AGRSYV 291
H LE+ SG+ + R G V + + V
Sbjct: 261 HRYQLASPEPADKATGTWFTRVDLENTVSGQCEAHIQRVGPVQVQSEPTVLDFGEDVTLV 320
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
K +A G RHSAVVT G LLT GW YGQ
Sbjct: 321 K-VAGGARHSAVVTGEGHLLTTGWNDYGQ 348
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 11/160 (6%)
Query: 91 HGETPEPFPLPTEASVVKA----AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
H ET E L + + V+ A GW H ++++E G++Y WGW E R+ +
Sbjct: 195 HVETREQPCLVEDLTGVRMKCVGAGGW-HSMAISELGDLYVWGWNESGQLGLPCRNISTQ 253
Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGE--EVVKRRKTSSAREESENPASGDEFFTLSPC 204
++ Q A P P+DK G V T S + E+ G P
Sbjct: 254 SPPAEERHRYQLASP----EPADKATGTWFTRVDLENTVSGQCEAHIQRVGPVQVQSEPT 309
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
++ V + KVA G RH+ +++ G + G+ GQL
Sbjct: 310 VLDFGEDVTLVKVAGGARHSAVVTGEGHLLTTGWNDYGQL 349
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 25/112 (22%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
+++++ G H LIL++ G V+ G G GQLGLG V T PCL +G
Sbjct: 161 VSEISCGKEHALILTNSGDVYSCGGGSRGQLGLGH----VETREQ-PCLVEDLTG----- 210
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQRMAKC 325
VR +K + GG HS +++ G L +GW GQ C
Sbjct: 211 -VR--------------MKCVGAGGWHSMAISELGDLYVWGWNESGQLGLPC 247
>gi|403303318|ref|XP_003942281.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Saimiri
boliviensis boliviensis]
Length = 531
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 119/317 (37%), Gaps = 91/317 (28%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + + V+++G GT +S ++ LCG K + G L +
Sbjct: 32 NEALYVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCG-KKIKSLSYGSGPHVLLS 90
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
+E G + WG G S L +G + P + T VV+ A G H +++ G
Sbjct: 91 TEDGVVYAWGH---NGYSQLGNGTTNQGVAPIQVCTNLLIKKVVEVACGSHHSMALAADG 147
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
EV+ WG+ C G GS ST Q PT R+ T+
Sbjct: 148 EVFAWGYNNC----------GQVGS---GSTANQ---PT---------------PRKVTN 176
Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
+ ++ +A G ++ + D G+V+GWGY G GQ
Sbjct: 177 CLHFK------------------------RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQ 212
Query: 244 LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
LGLG+ + TP VR +++S V +I CG H+
Sbjct: 213 LGLGNNGNQL-TP------------------VRVAALHSVC------VNQIVCGYAHTLA 247
Query: 304 VTDAGALLTFGWGLYGQ 320
+TD G L +G YGQ
Sbjct: 248 LTDEGLLYAWGANTYGQ 264
>gi|209875367|ref|XP_002139126.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
gi|209554732|gb|EEA04777.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
Length = 1864
Score = 61.6 bits (148), Expect = 5e-07, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 58/130 (44%), Gaps = 28/130 (21%)
Query: 188 ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
E E + ++++SPC+V KI+++ G HTL LSD G ++ WG G G LG G
Sbjct: 141 EEEYLDKNESWYSISPCIVKFPSNTKISRICCGANHTLALSDNGHLYSWGVGQFGCLGTG 200
Query: 248 SRIKM-VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
S + PT I N+S K V+ IA G RHS T+
Sbjct: 201 STEDVFFPTKIEIS--------------------NNSLK-----VQHIAAGSRHSLCCTE 235
Query: 307 AGALLTFGWG 316
G L F WG
Sbjct: 236 NGNL--FAWG 243
Score = 49.3 bits (116), Expect = 0.003, Method: Composition-based stats.
Identities = 71/311 (22%), Positives = 113/311 (36%), Gaps = 78/311 (25%)
Query: 70 GKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASV--VKAAAGWAHCVSVTEAGEVYT 127
G + TWG+ + GQ L G + P P + +S+ V+ A G + +T++G+VY
Sbjct: 290 GIVFTWGNGSN-GQ--LGHGLQLDCPIPRKVHGISSIPFVQLAFGAFISMGLTQSGDVYI 346
Query: 128 WGWR--ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS-DKRAGEEVVKRRKTSS 184
WG + E + + F SA A+ S + R + +K R S+
Sbjct: 347 WGSKQHEIFSTPTKVKSFKSAICHIACGPYISFAIDVRSIAYSWNNRIIAQSIKNRDVSN 406
Query: 185 AREE-------SENPAS----------GDEFFTLSPCLVTLN------------------ 209
EE + NP D F + CLV N
Sbjct: 407 IEEELVLKRMNNPNPVVLPFFQGSSFVDDAIFLMGFCLVDSNGNKMNYTAKELGGVYCTR 466
Query: 210 --------------------PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
P + ++A G H ++L+ G V+ WG GQLG+GS
Sbjct: 467 RIYGPNNDSSGLGSLIYKSLPPNTVRQIACGEAHNILLTYGGCVYTWGDNSYGQLGIGSL 526
Query: 250 IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA 309
+ + S K++ + V SG ++ +ACG H+ +G
Sbjct: 527 HRDL----------GETSNKNKTFVSEPNEVKFSGP-----IRRVACGYWHTLCCDYSGN 571
Query: 310 LLTFGWGLYGQ 320
T+G G YGQ
Sbjct: 572 CFTWGRGDYGQ 582
Score = 43.5 bits (101), Expect = 0.15, Method: Composition-based stats.
Identities = 67/297 (22%), Positives = 99/297 (33%), Gaps = 106/297 (35%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+ P + PI CG W +C C + SG TWG D GQ L +G
Sbjct: 542 SEPNEVKFSGPIRRVACG--YWHTLC---CDY------SGNCFTWGRGD-YGQ--LGTGA 587
Query: 91 HGETPEPFPLPTEASVVKAAAG--WAHCVSVT-----------EAGEVYTWGWRECVPSA 137
EP + + +V+ G ++ C+ T +G+++ WG
Sbjct: 588 ICNMYEPVGIISLNNVIDVYGGESYSACIIATGITISKDLDTINSGDLWIWG-------- 639
Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
DFG G D GK A P
Sbjct: 640 --NGDFGKLG-LGDDVNGKCIAAPR----------------------------------- 661
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
LN G I KV+ G HTL L+ G + WG G G+LG+G+
Sbjct: 662 ---------YLNLGYPIVKVSLGTVHTLALTANGNLITWGAGYYGRLGVGT--------- 703
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
+ +RP++++ G + +IA G HS V+ G L +G
Sbjct: 704 --------TNNHNRPIIIK-------FPIGDVRISDIAVGTDHSMAVSVDGDLWIWG 745
>gi|168058364|ref|XP_001781179.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667416|gb|EDQ54047.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 466
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 114/274 (41%), Gaps = 29/274 (10%)
Query: 43 PARLCGGDSWKDVCGGGCGF-ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
P R+ G +S + V G G ++A + G L TWG + T + +TP+
Sbjct: 126 PQRVRGLESVEVVSARGSGVVSMAIARDGSLWTWGKSKRGQLGLGTKIMYAQTPKRVEAL 185
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
VV+ A GW H ++ T G VY+WG+ G G DS ++++
Sbjct: 186 VGQQVVQVALGWGHALARTAEGHVYSWGYAAN----------GRLGFQLSDSESAETSVK 235
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
+ +P + R E ++ E+ E S P + +T+++ G
Sbjct: 236 -KTSPTAIARVDNESIEEAAYRQVLEDMEKEKS--PVLAWEPVRINSLCSQHVTEISCGM 292
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
H+L L++ G++ +G GQLG + I V + I +E++ +D QG +
Sbjct: 293 DHSLTLNEKGELCSFGDNSLGQLGRSTAISAVQSS--IFAVENS---EDHV----QGLIR 343
Query: 282 SSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
V + G HS VT G++ ++GW
Sbjct: 344 G------EKVLHVGAGLGHSLAVTAQGSIYSWGW 371
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 105/286 (36%), Gaps = 84/286 (29%)
Query: 8 REENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPAR---LCGGDSWKDVCGGGCGFAL 64
R +NE +EE V L EKSP+L+ P R LC + CG +L
Sbjct: 244 RVDNESIEEAAYRQV-----LEDMEKEKSPVLAWEPVRINSLCSQHVTEISCG--MDHSL 296
Query: 65 ATSESGKLITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA 114
+E G+L ++G +A QS + + ++ E + E V+ AG
Sbjct: 297 TLNEKGELCSFGDNSLGQLGRSTAISAVQSSIFAVENSEDHVQGLIRGE-KVLHVGAGLG 355
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H ++VT G +Y+WGW AG
Sbjct: 356 HSLAVTAQGSIYSWGW----------------------------------------NAGH 375
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
++ + + S+ GD + + G H+L L+ GQ+W
Sbjct: 376 QLGRDERQDSSLPACVEDVEGD-----------------VVALVGGRAHSLALTSQGQLW 418
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIP-----CLEHAASGKDRPLLV 275
WG G G+LGLGS P+P L+ C+ A G D L++
Sbjct: 419 VWGSGKNGRLGLGSPADE-PSPLLLESLENHCIAEVACGFDHSLIL 463
>gi|326506178|dbj|BAJ86407.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 389
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 121/326 (37%), Gaps = 68/326 (20%)
Query: 17 CKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKL 72
C + ++ WG+ G PE SP G GG LA + G+
Sbjct: 57 CDDGSLFTWGWNQRGTLGHPPETKTESSPAHVDALVGVKIVQAAIGGW-HCLAVDDKGRA 115
Query: 73 ITWGSADDEGQSYLTSGKHGETPE-----------PFPLPTEAS----VVKAAAGWAHCV 117
WG G Y G+ GE PE P+P + V + AAG H V
Sbjct: 116 YAWG-----GNEY---GQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGGTHSV 167
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV- 176
+T+ G V+TWG + P + K+ + EQ A +
Sbjct: 168 VLTQEGHVWTWG--QPWPPGDI-----------KNISTPVRVQGLEQVSMIAVGAFHNLA 214
Query: 177 --VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
V R + E GD P V + + +AAGG H+ L+ G+V+
Sbjct: 215 LSVDRILWAWGNNEYGQLGIGDTQPRSQPIRVEGLSNLSLVDIAAGGWHSAALTKEGEVY 274
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
WG G G+LG G + H++P +G+D + ++
Sbjct: 275 AWGRGEHGRLGFGDD----KSSHMVPLQVQLLAGED--------------------IVQV 310
Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQ 320
+CGG HS V+T G + ++G G +G+
Sbjct: 311 SCGGTHSVVLTSDGRIFSYGRGDHGR 336
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 15/111 (13%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
D+ + P V L G I +V+ GG H+++L+ G+++ +G G G+LG G ++
Sbjct: 289 DKSSHMVPLQVQLLAGEDIVQVSCGGTHSVVLTSDGRIFSYGRGDHGRLGDGRKVT-TGH 347
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVT 305
P +P L + S +S G +YV ACGGRH+ A+VT
Sbjct: 348 PMEVPI----------NLPPPKTSTSSEGLWQANYV---ACGGRHTLAIVT 385
>gi|422295033|gb|EKU22332.1| phosphatidylinositide phosphatase sac1 [Nannochloropsis gaditana
CCMP526]
Length = 1021
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 108/255 (42%), Gaps = 44/255 (17%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE-ASVVKAAAGWAH 115
CG L ++ G+++T G+ + S HG PEP L E ++V+ AAG A
Sbjct: 804 ACGEKHTLILTDDGEVLTAGNGEYGRLGNGGSSDHG-VPEPVELFDEKTNIVEVAAGHAF 862
Query: 116 CVSVTEAGEVYTWGWRE---CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ +T+ G+++TWG E ++ D S A+P K+
Sbjct: 863 NLVLTQDGKIFTWGRNEQGQLGLGGGISMDVYS-----------MEAVPLLVEALESKKV 911
Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS-DMG 231
+++ EE E G + L P + + G K+ +V GG HT +++ D
Sbjct: 912 VHVAAGHSHSAAVTEEGELYMWGMKIH-LEPQVFRVGEGDKVWQVGCGGSHTAVVTEDAH 970
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
Q++ +G G LG G+R P P L+ + G AGR V
Sbjct: 971 QLFTFGKGSSLCLGHGTR-SYTPHPKLV----------------------ADGLAGRGVV 1007
Query: 292 KEIACGGRHSAVVTD 306
K +ACG RH AV+TD
Sbjct: 1008 K-VACGHRHMAVITD 1021
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 115/310 (37%), Gaps = 72/310 (23%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
G ++ +E GKL TWG + + S K P + +VK A G H
Sbjct: 692 LAAGLNYSAGVTEDGKLYTWGDGSNHKLGHGDS-KPVYRPRQVEALQDVKIVKVACGDFH 750
Query: 116 CVSVTEAGEVYTWGWRECV---------------PSAKVTRDFGSAGSFQKDSTGKQSAL 160
++ E G ++TWGW + P KV R G
Sbjct: 751 TAAIDEDGRLWTWGWGGSLFGGIGGLGHGDEAEQPRPKVVRSLVDYGC------------ 798
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD-EFFTL---------SPCLVTL-N 209
R G + T ++ E +G+ E+ L P V L +
Sbjct: 799 ----------RVGSVACGEKHTLILTDDGEVLTAGNGEYGRLGNGGSSDHGVPEPVELFD 848
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVPTPHLIPCLE- 263
I +VAAG L+L+ G+++ WG +GQLGLG I M P L+ LE
Sbjct: 849 EKTNIVEVAAGHAFNLVLTQDGKIFTWGRNEQGQLGLGGGISMDVYSMEAVPLLVEALES 908
Query: 264 ----HAASGKDRPLLVRQ--------GSVNSSGKAGR----SYVKEIACGGRHSAVVT-D 306
H A+G V + ++ + R V ++ CGG H+AVVT D
Sbjct: 909 KKVVHVAAGHSHSAAVTEEGELYMWGMKIHLEPQVFRVGEGDKVWQVGCGGSHTAVVTED 968
Query: 307 AGALLTFGWG 316
A L TFG G
Sbjct: 969 AHQLFTFGKG 978
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 18/109 (16%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VKI KVA G HT + + G++W WG+GG G+G + + R
Sbjct: 739 VKIVKVACGDFHTAAIDEDGRLWTWGWGGSLFGGIGGLGHG------------DEAEQPR 786
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P +VR V+ + G +ACG +H+ ++TD G +LT G G YG+
Sbjct: 787 PKVVR-SLVDYGCRVG-----SVACGEKHTLILTDDGEVLTAGNGEYGR 829
>gi|330845272|ref|XP_003294517.1| hypothetical protein DICPUDRAFT_159521 [Dictyostelium purpureum]
gi|325075008|gb|EGC28958.1| hypothetical protein DICPUDRAFT_159521 [Dictyostelium purpureum]
Length = 594
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 145/372 (38%), Gaps = 82/372 (22%)
Query: 21 VVYMWGYLP----GTSPEKSPIL-SPIPARLCGGDSWKDV-CGGGCGFALATSESGKLIT 74
+VY WGY G ++ I+ SP+ + S K + CG A+A + G L +
Sbjct: 72 LVYSWGYNYFGQCGNGGNQTIIVPSPVQFSIDIKISIKTIACGDSHTLAIAENPYG-LYS 130
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG----- 129
WG + GQ L + P A+ V A G H + V+ GE+YT+G
Sbjct: 131 WG-CNRWGQLGLGDQINRNQPTRINHSDRATFVAIACGSQHSMIVSNFGELYTFGCGTTG 189
Query: 130 ----------WRECVPSAKVTRDFGSAG-----SFQKDSTGK------------------ 156
++ V S+ V + S G S DSTGK
Sbjct: 190 RLGLGDESPRFKPTVVSSLVGKQIVSCGAGVMHSSCVDSTGKIYSFGWNRYGQLGTGSVK 249
Query: 157 QSALPTE--QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPC--------LV 206
LP + + + K +VV + + A + S F + C L
Sbjct: 250 SHTLPAKMKETQITSKMHFVKVVCGKNHTLALSNNGEMVS----FGFNACGQLGVGSHLD 305
Query: 207 TLNP-----GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+NP K+ +A G H+L ++D G+ + WGY +G LGL P LIP
Sbjct: 306 QINPTKIEFSEKVLDIATGYYHSLCVTDNGEAYSWGYMSDGGLGLSEVYTHQTKPKLIPL 365
Query: 262 --LEHAASGKDRPL--LVRQGSVNSSGKAGRS-------------YVKEIACGGRHSAVV 304
+ H S + + +G N++ + + +V+++ G +SA++
Sbjct: 366 VHIRHTFSDSNDAFDEIYGKGDENTTEETIENHKKYIQDKYSTGDFVEKVGAGAWNSAII 425
Query: 305 TDAGALLTFGWG 316
T +G L TFG+G
Sbjct: 426 TSSGKLYTFGYG 437
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 29/128 (22%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GD+ P + + +A G +H++I+S+ G+++ +G G G+LGLG
Sbjct: 142 GDQINRNQPTRINHSDRATFVAIACGSQHSMIVSNFGELYTFGCGTTGRLGLGDE----- 196
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG--RHSAVVTDAGALLT 312
+P P + + GK + ++CG HS+ V G + +
Sbjct: 197 SPRFKPTVVSSLVGK----------------------QIVSCGAGVMHSSCVDSTGKIYS 234
Query: 313 FGWGLYGQ 320
FGW YGQ
Sbjct: 235 FGWNRYGQ 242
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 26/120 (21%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQ-VWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
SP +++ + I +A G HTL +++ ++ WG GQLGLG +I
Sbjct: 96 SPVQFSIDIKISIKTIACGDSHTLAIAENPYGLYSWGCNRWGQLGLGDQIN--------- 146
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+++P + + R+ IACG +HS +V++ G L TFG G G+
Sbjct: 147 --------RNQPTRINH--------SDRATFVAIACGSQHSMIVSNFGELYTFGCGTTGR 190
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 22/126 (17%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GDE P +V+ G +I AG H+ + G+++ +G+ GQLG GS
Sbjct: 194 GDESPRFKPTVVSSLVGKQIVSCGAGVMHSSCVDSTGKIYSFGWNRYGQLGTGS-----V 248
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
H +P A K+ + + + ++ CG H+ +++ G +++FG
Sbjct: 249 KSHTLP-----AKMKETQI------------TSKMHFVKVVCGKNHTLALSNNGEMVSFG 291
Query: 315 WGLYGQ 320
+ GQ
Sbjct: 292 FNACGQ 297
>gi|149730315|ref|XP_001489590.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Equus
caballus]
Length = 551
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 92/218 (42%), Gaps = 33/218 (15%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LATSE G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHVVLATSE-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKRVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 207
Query: 174 EEVVKRRKTSSAREESENPA----SGDEFFTL-------SPCLVTLNPGVKITKVAAGGR 222
+ + S A ++ SG+ L +PC V G+++ + A G
Sbjct: 208 VNIACGQMCSMAVVDTGEVYVWGYSGNGQLGLGGSGNQPTPCRVAALQGIRVQRAACGYA 267
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
HTL+L+D GQV+ WG GQLG G++ PTP ++
Sbjct: 268 HTLVLTDEGQVYVWGANSYGQLGTGNKSNQPYPTPIIV 305
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 140 LVPCHISTNLSNKRVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSVNSSGKAGRSY---------------------- 290
CL+ + A G+ + +V G V G +G
Sbjct: 199 TGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYSGNGQLGLGGSGNQPTPCRVAALQGIR 258
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ ACG H+ V+TD G + +G YGQ
Sbjct: 259 VQRAACGYAHTLVLTDEGQVYVWGANSYGQ 288
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG +
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYS 232
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V +AA G+AH + +T+ G+VY WG
Sbjct: 233 ---GNGQLGLGGSGNQPTPCRVAALQGIRVQRAACGYAHTLVLTDEGQVYVWG 282
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G K+ ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDVQSTIEPRRLDSLTGKKVACLSYGSGPHVVLATSEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKR----VIEVACGSYHSLVLTSDGEVFA 175
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 176 WGYNNSGQ 183
>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1070
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 102/257 (39%), Gaps = 54/257 (21%)
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
A+D GQ L + G P + + + G H ++VT+ G+V WG
Sbjct: 64 ANDRGQ--LGQDRPGSELAHVPATETLVITQVSCGNDHTLAVTDRGQVLGWG-------- 113
Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
D G G DS K+ P S + + + + + A GD
Sbjct: 114 --RNDRGQCGLSTGDSEDKRK--PRFLKSLSSCQVAQVACGSMHSMALTRDGRIFAWGDN 169
Query: 198 FF----------TL---SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
F TL P ++ PGV I ++A GG H+ LS G V+GWG GQL
Sbjct: 170 SFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQL 229
Query: 245 GLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
GLG + ++ PTP + L +Q VK IACG ++A+
Sbjct: 230 GLGTTEDRVSPTPL-------------KNLKTKQ-------------VKYIACGQNYTAI 263
Query: 304 VTDAGALLTFGWGLYGQ 320
+T +G L FG G GQ
Sbjct: 264 LTASGGLFLFGQGSEGQ 280
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 31/113 (27%)
Query: 233 VWGWGYGGEGQL---GLGSRIKMVPTPHLIPCL------EHAASGKDRPLLVRQGSV--- 280
V+ WG +GQL GLG + + +P +P L E + + +L+R G+V
Sbjct: 3 VFSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTVMMC 62
Query: 281 --NSSGKAGRS---------------YVKEIACGGRHSAVVTDAGALLTFGWG 316
N G+ G+ + +++CG H+ VTD G +L GWG
Sbjct: 63 GANDRGQLGQDRPGSELAHVPATETLVITQVSCGNDHTLAVTDRGQVL--GWG 113
>gi|354487926|ref|XP_003506122.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Cricetulus
griseus]
gi|344253822|gb|EGW09926.1| RCC1 and BTB domain-containing protein 2 [Cricetulus griseus]
Length = 551
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 39/221 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT++ G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHIVLATTD-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 207
Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ + S A ++ +SG++ +PC V G+++ +VA
Sbjct: 208 MNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ---PTPCRVAALQGIRVQRVAC 264
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
G HTL+L+D GQV+ WG GQLG G++ PTP ++
Sbjct: 265 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVV 305
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 259 VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 288
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDIQSTIEPRRLNSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 176 WGYNNSGQ 183
>gi|291408963|ref|XP_002720777.1| PREDICTED: regulator of chromosome condensation (RCC1) and BTB
(POZ) domain containing protein 1 [Oryctolagus
cuniculus]
Length = 531
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 114/321 (35%), Gaps = 89/321 (27%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H + +
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMVL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEVY WG+ C G GS ST Q P K +KR
Sbjct: 144 AADGEVYAWGYNNC----------GQVGS---GSTANQ--------PTPRKVTNCLHIKR 182
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+ +A G ++ + D G+V+ WGY
Sbjct: 183 ----------------------------------VVGIACGQTSSMAVLDNGEVYAWGYN 208
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G GQLGLG+ + TP VR +++S V +I CG
Sbjct: 209 GNGQLGLGNNGNQL-TP------------------VRVAALHSVC------VNQIVCGYA 243
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
H+ +TD G L +G YGQ
Sbjct: 244 HTLALTDEGLLYAWGANTYGQ 264
>gi|156394306|ref|XP_001636767.1| predicted protein [Nematostella vectensis]
gi|156223873|gb|EDO44704.1| predicted protein [Nematostella vectensis]
Length = 363
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 97/263 (36%), Gaps = 86/263 (32%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE-PFPLPTEASVVKAAAGWAHCV 117
G F+ A +E+G+L TWGS EGQ+ L GE E P L V + G+ H
Sbjct: 147 GSDFSAAITENGELYTWGSCG-EGQNGL-----GEDTEIPTRLHLHGKVRMVSCGYYHMA 200
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
VTE G +Y G +E G + L EQ +
Sbjct: 201 VVTEDGSLYMCGEKE----------------------GGKLGLDHEQL--------DNTS 230
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
+ +K S ++ A G EF T +++ G V+ +G
Sbjct: 231 QLQKIKSIEDQVVVAACGAEF-------------------------TAVVTKNGSVYTFG 265
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
G +GQLGLGS + P IP E + + ++CG
Sbjct: 266 QGNQGQLGLGSSMMETEFPERIPLFEKVKA------------------------RTVSCG 301
Query: 298 GRHSAVVTDAGALLTFGWGLYGQ 320
+AV+T G L TFG G +G+
Sbjct: 302 ESFTAVITKHGNLYTFGDGRHGK 324
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 25/126 (19%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAAS 267
K+ VA G HT+ ++ G ++ +G GG+GQLG G + P +I L+ H A
Sbjct: 88 KVYMVACGRNHTIAATESGHLYSFGCGGDGQLGHGD-AEDSHVPKIIEGLDVQKYKHLAC 146
Query: 268 GKD-RPLLVRQGSVNSSGKAG------------------RSYVKEIACGGRHSAVVTDAG 308
G D + G + + G G V+ ++CG H AVVT+ G
Sbjct: 147 GSDFSAAITENGELYTWGSCGEGQNGLGEDTEIPTRLHLHGKVRMVSCGYYHMAVVTEDG 206
Query: 309 ALLTFG 314
+L G
Sbjct: 207 SLYMCG 212
>gi|74144437|dbj|BAE36068.1| unnamed protein product [Mus musculus]
Length = 527
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 39/221 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT++ G++ TWG S L +G P + T S V++ A G
Sbjct: 82 GSGPHIVLATTD-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 137
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 138 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 183
Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ + S A ++ +SG++ +PC V G+++ +VA
Sbjct: 184 MNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ---PTPCRVAALQGIRVQRVAC 240
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
G HTL+L+D GQ++ WG GQLG G++ PTP ++
Sbjct: 241 GYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVV 281
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 116 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 174
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 175 TGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 234
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 235 VQRVACGYAHTLVLTDEGQIYAWGANSYGQ 264
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G++Y WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 258
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 57 GDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT----- 111
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 112 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 151
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 152 WGYNNSGQ 159
>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
[Ornithorhynchus anatinus]
Length = 1006
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 92/230 (40%), Gaps = 55/230 (23%)
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--K 151
++V + G AH +++ + G+VY WG EC+ +V R+ S Q +
Sbjct: 34 NIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECI---RVPRNIKSLSDIQIVQ 90
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF-TLSPCLVTLNP 210
S G +L + G EV S + + G EF SP L+
Sbjct: 91 VSCGYYHSLALSK--------GSEVF-----SWGQNKYGQLGLGFEFKKQTSPQLIKSLL 137
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G+ ++AAGG H+ +L+ G ++GWG GQLGL P+L+ L
Sbjct: 138 GIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQK---- 192
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ I CG H+A +T G + TFG G YGQ
Sbjct: 193 --------------------IVYICCGEDHTAALTKEGGVFTFGAGGYGQ 222
>gi|449522147|ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Cucumis sativus]
Length = 302
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 25/121 (20%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+L P + G+ I VAAG HT +++ G+++GWG+G G LGLG R L+
Sbjct: 17 SLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDR-----NDRLV 71
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
P + G D+ ++V ACG RH+ V+ G L T+GW YG
Sbjct: 72 PQKVSSVDG-DKMVMV-------------------ACGWRHTISVSSLGGLYTYGWSKYG 111
Query: 320 Q 320
Q
Sbjct: 112 Q 112
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 80/214 (37%), Gaps = 18/214 (8%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA 114
+ G A +E G+L WG G L P+ +V A GW
Sbjct: 33 MVAAGAEHTAAVTEDGELFGWGWGR-YGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWR 91
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H +SV+ G +YT+GW + +G G + L + + +G
Sbjct: 92 HTISVSSLGGLYTYGWSK----------YGQLGHGDFEDRLVPHRLEALRGDNISQISGG 141
Query: 175 EVVKRRKTSSAR------EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
T+ + + +GD SP + K+ +++ G RHTL ++
Sbjct: 142 WRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVT 201
Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
D V+ WG G GQLG G + TP ++ L
Sbjct: 202 DKQNVFSWGRGTNGQLGHGESVDR-NTPMILEAL 234
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 29/142 (20%)
Query: 191 NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
N GD L P V+ G K+ VA G RHT+ +S +G ++ +G+ GQLG G
Sbjct: 60 NLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDF- 118
Query: 251 KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGAL 310
L+P A G + + +I+ G RH+ +T G L
Sbjct: 119 ----EDRLVPHRLEALRGDN--------------------ISQISGGWRHTMALTTDGKL 154
Query: 311 LTFGWGLYGQRMAKCLAGDGIN 332
+GW +GQ AGD I+
Sbjct: 155 YGWGWNKFGQ----VGAGDNID 172
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 42 IPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P RL GD+ + GG +A + GKL WG + GQ +P
Sbjct: 123 VPHRLEALRGDNISQISGG-WRHTMALTTDGKLYGWG-WNKFGQVGAGDNIDHCSPIQIK 180
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P + V++ + GW H ++VT+ V++WG
Sbjct: 181 FPQDQKVIQISCGWRHTLAVTDKQNVFSWG 210
>gi|42573750|ref|NP_974971.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|332010006|gb|AED97389.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 383
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 120/307 (39%), Gaps = 52/307 (16%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHG 92
++S L+ P R+ DS G CG F + G L WG D G+
Sbjct: 14 DQSFSLAQTPGRI-DADSSSFRIGISCGLFHSGLTIDGDLWIWGKGDG-GRLGFGQENSV 71
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW------------RECVPSAKVT 140
P PL E S+ A G H V++T G+V+TWG+ RE VP +
Sbjct: 72 FVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVP--RRV 129
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
D ++G +A TE +GE + R+ R +E
Sbjct: 130 DDSWDCKISAIATSGTHTAAITE--------SGELYMWGREEGDGRLGLGPGRGPNEGGG 181
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-MVPTPHLI 259
LS V + V+ GG T+ L+ GQ+W WG +LG G + P P +
Sbjct: 182 LSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMP--V 239
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
P LE VR + +IACGG HS +T+ G +L++G G +G
Sbjct: 240 PSLEG----------VR--------------ITQIACGGYHSLALTEEGKVLSWGHGGHG 275
Query: 320 QRMAKCL 326
Q + L
Sbjct: 276 QLGSSSL 282
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 79/200 (39%), Gaps = 12/200 (6%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS----VVKAAAGWAHCVS 118
++A + G + TWG + G T E P + S + A H +
Sbjct: 95 SVALTHQGDVFTWGYG-----GFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAA 149
Query: 119 VTEAGEVYTWGWRE--CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+TE+GE+Y WG E R G S K +P
Sbjct: 150 ITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALT 209
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ + + + GD P V GV+IT++A GG H+L L++ G+V W
Sbjct: 210 KEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSW 269
Query: 237 GYGGEGQLGLGS-RIKMVPT 255
G+GG GQLG S R + VPT
Sbjct: 270 GHGGHGQLGSSSLRNQKVPT 289
>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 6906
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 94/238 (39%), Gaps = 32/238 (13%)
Query: 66 TSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEV 125
S SG+L T+G +D GQ L +H TP+ V + G H V T +GEV
Sbjct: 504 VSVSGELYTFG-MNDCGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEV 562
Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD---------KRAGEEV 176
+T G D G G KQ +PT+ P++ A
Sbjct: 563 FTCG----------KNDHGQLGL----GHNKQVKVPTQVVLPNELVCFVACGYYHATAIT 608
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
S R + G + P +T++ ++ A G HTL++SD GQV+ +
Sbjct: 609 STGLTYSFGRNDYGQLGIGSKIHQNIPIALTISSNTRMVHAACGCYHTLLMSDSGQVFVF 668
Query: 237 GYGGEGQLG--------LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
G +GQLG L +K+ P ++ CL AA L+V + N G A
Sbjct: 669 GRNNKGQLGNRGNTDSLLPVPLKVRPEKNMRRCLHIAAGFYTTSLIVERKRENDEGDA 726
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 62/142 (43%), Gaps = 33/142 (23%)
Query: 211 GVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL------ 262
G+ IT VAA G H L +S G V+ WGY GQLGLG+ + TP +I L
Sbjct: 3218 GIPITMVAASNGCEHMLAISHDGAVYSWGYNDRGQLGLGTTVSKSHTPRVIESLREKYFI 3277
Query: 263 -------EHAASGKDRPLLVRQGSVNSSGKAGRSYVKE-----------------IACGG 298
H+A + L+ G +N SG+ G + + +ACG
Sbjct: 3278 TFAAVSYHHSAVVSNNGDLLTFG-MNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGL 3336
Query: 299 RHSAVVTDAGALLTFGWGLYGQ 320
H+ + D G + +FG YGQ
Sbjct: 3337 YHTVAIVDDGDVYSFGKNEYGQ 3358
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 99/257 (38%), Gaps = 75/257 (29%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
S +G L+T+G +D GQ L +H TP+ + V + A G H V++ + G+
Sbjct: 3289 VVSNNGDLLTFG-MNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDDGD 3347
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT-EQAPPSDKRAGEEVVKRRKTS 183
VY++G E +G G S + + +P + PP+ +
Sbjct: 3348 VYSFGKNE----------YGQLGL----SHTQNTKVPMLVKIPPAPR------------- 3380
Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
+P L +N V+ V G HT+ + + G+V WG GQ
Sbjct: 3381 ------------------TPMLDAVNKAVQ---VYCGYYHTVTILECGKVVTWGRNDYGQ 3419
Query: 244 LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
LG+GS+ EH + + PL + S VK +CG H+ +
Sbjct: 3420 LGIGSK-------------EHKSIAQFVPLPL------------TSRVKRASCGCYHTLL 3454
Query: 304 VTDAGALLTFGWGLYGQ 320
+ G + FG GQ
Sbjct: 3455 LLVNGRPMVFGRNNKGQ 3471
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 105/293 (35%), Gaps = 76/293 (25%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYL-TS 88
G E+ + SPIPA L G GC LA S G + +WG +D GQ L T+
Sbjct: 3201 GNFDERLIVPSPIPA-LSGIPITMVAASNGCEHMLAISHDGAVYSWG-YNDRGQLGLGTT 3258
Query: 89 GKHGETPEPF-PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
TP L + + AA + H V+ G++ T+G + +G
Sbjct: 3259 VSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMND-------------SG 3305
Query: 148 SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVT 207
D T Q +P LV
Sbjct: 3306 QLGLDHTQHQH-------------------------------------------TPQLVE 3322
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
K+ +VA G HT+ + D G V+ +G GQLGL S + P L+
Sbjct: 3323 TLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGL-SHTQNTKVPMLVKI------ 3375
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P R +++ KA + Y CG H+ + + G ++T+G YGQ
Sbjct: 3376 ----PPAPRTPMLDAVNKAVQVY-----CGYYHTVTILECGKVVTWGRNDYGQ 3419
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 98/292 (33%), Gaps = 85/292 (29%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
G E+ +L PI A + + GC +A +++G +WG D + G
Sbjct: 416 GNFDERVMLLRPIQALRSHRVKYINA-SNGCEHLIAITDTGLAYSWGYNDRGQLGHENVG 474
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
P+ E + AA + H V+ +GE+YT+G +C G
Sbjct: 475 TKLYLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDC-------------GQL 521
Query: 150 QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLN 209
D T QS +P LV
Sbjct: 522 GLDHTQHQS-------------------------------------------TPQLVKAL 538
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLIPCLEHAASG 268
G ++ V+ G H ++ + G+V+ G GQLGLG ++ VPT ++P
Sbjct: 539 LGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHNKQVKVPTQVVLP-------- 590
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V +ACG H+ +T G +FG YGQ
Sbjct: 591 -------------------NELVCFVACGYYHATAITSTGLTYSFGRNDYGQ 623
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 129/337 (38%), Gaps = 88/337 (26%)
Query: 39 LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
L+ +P LCG D + V G A+ TS+ G ++T G + GQ HG E
Sbjct: 372 LTSVP--LCGWDHIRQVVSGNEILAILTSD-GVVLTCG-LNKSGQC-----GHGNFDERV 422
Query: 99 PL--PTEA------SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
L P +A + A+ G H +++T+ G Y+WG+ + G
Sbjct: 423 MLLRPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWGYND-------------RGQLG 469
Query: 151 KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA----SGDEFFTL----- 201
++ G + LP E +K +K SA + A SG E +T
Sbjct: 470 HENVGTKLYLPKLI----------ESIKEKKMKSAAVSYHHSALVSVSG-ELYTFGMNDC 518
Query: 202 ------------SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
+P LV G ++ V+ G H ++ + G+V+ G GQLGLG
Sbjct: 519 GQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHN 578
Query: 250 IKM-VPTPHLIP--------CLEHAASGKDRPLLVRQGSVNSSGKAG------------- 287
++ VPT ++P C + A+ L N G+ G
Sbjct: 579 KQVKVPTQVVLPNELVCFVACGYYHATAITSTGLTYSFGRNDYGQLGIGSKIHQNIPIAL 638
Query: 288 ----RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ + ACG H+ +++D+G + FG GQ
Sbjct: 639 TISSNTRMVHAACGCYHTLLMSDSGQVFVFGRNNKGQ 675
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 58/150 (38%), Gaps = 42/150 (28%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG---LGSRIKMVPTPH 257
L P + VK + G H + ++D G + WGY GQLG +G+++ + P
Sbjct: 425 LRPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWGYNDRGQLGHENVGTKLYL---PK 481
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
LI ++ +K A HSA+V+ +G L TFG
Sbjct: 482 LIESIKEKK------------------------MKSAAVSYHHSALVSVSGELYTFGMND 517
Query: 318 YGQ------------RMAKCLAGDGINMGS 335
GQ ++ K L G ++M S
Sbjct: 518 CGQLGLDHTQHQSTPQLVKALLGHHVSMVS 547
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 56/139 (40%), Gaps = 32/139 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-------HAA 266
I +A G ++L G V+ G GQ G+G+ + + P IP L A+
Sbjct: 3168 IQSIAGGNEVLVVLMKDGAVFTCGLNKSGQCGIGNFDERLIVPSPIPALSGIPITMVAAS 3227
Query: 267 SGKDRPLLV-RQGSV-----NSSGKAG-------------------RSYVKEIACGGRHS 301
+G + L + G+V N G+ G + ++ A HS
Sbjct: 3228 NGCEHMLAISHDGAVYSWGYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHS 3287
Query: 302 AVVTDAGALLTFGWGLYGQ 320
AVV++ G LLTFG GQ
Sbjct: 3288 AVVSNNGDLLTFGMNDSGQ 3306
>gi|297694075|ref|XP_002824322.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pongo abelii]
gi|332241941|ref|XP_003270143.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Nomascus
leucogenys]
Length = 531
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 116/321 (36%), Gaps = 89/321 (27%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEV+ WG+ C G GS ST Q P K +KR
Sbjct: 144 AADGEVFAWGYNNC----------GQVGS---GSTANQ--------PTPRKVTNCLHIKR 182
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+ +A G ++ + D G+V+GWGY
Sbjct: 183 ----------------------------------VVGIACGQTSSMAVLDNGEVYGWGYN 208
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G GQLGLG+ + TP VR +++S V +I CG
Sbjct: 209 GNGQLGLGNNGNQL-TP------------------VRVAALHSVC------VNQIVCGYA 243
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
H+ +TD G L +G YGQ
Sbjct: 244 HTLALTDEGLLYAWGANTYGQ 264
>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
Length = 1059
Score = 61.6 bits (148), Expect = 6e-07, Method: Composition-based stats.
Identities = 82/319 (25%), Positives = 118/319 (36%), Gaps = 88/319 (27%)
Query: 34 EKSPILSPIP-ARLCGGDSWKDVCGGGCGFALATSESGKLITWGSAD--DEGQSYLTSGK 90
E++ ILSP +RL D + CG L ++ GKL + GS + + G S S
Sbjct: 21 EETSILSPKEVSRLQELDIKEISCGEK--HTLIVTKDGKLYSCGSNEYGELGHSKPRSRA 78
Query: 91 HG-ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
+ E + V++AA G + +T AGEV++WG D G G
Sbjct: 79 VSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWG----------RNDKGQLGR- 127
Query: 150 QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLN 209
GK S +EE P +L+ C V
Sbjct: 128 -----GKLS---------------------------KEEERKPKL---MKSLAVCTVV-- 150
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----H 264
++ G H L L+D G+++ WG GQLGLGS TP I CL
Sbjct: 151 ------QITCGANHCLALTDDGRLFSWGCNKYGQLGLGSSHSFHDTPQQIVCLRGIPIAQ 204
Query: 265 AASGKDRPLLVRQGSV------NSSGKAG-----------------RSYVKEIACGGRHS 301
ASG + ++ NS G+ G V I+CG H+
Sbjct: 205 IASGGNHSFILTWSRAVFGWGKNSFGQLGLNDEYDKSHPTLCKSLRNQKVMYISCGEDHT 264
Query: 302 AVVTDAGALLTFGWGLYGQ 320
+T G + +FG G +GQ
Sbjct: 265 VALTKEGGVFSFGAGGFGQ 283
Score = 61.2 bits (147), Expect = 7e-07, Method: Composition-based stats.
Identities = 65/266 (24%), Positives = 111/266 (41%), Gaps = 44/266 (16%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAG 112
GG F+L + +G++ +WG +D+GQ L GK + E P ++ +VV+ G
Sbjct: 99 AGGSEFSLVITTAGEVFSWGR-NDKGQ--LGRGKLSKEEERKPKLMKSLAVCTVVQITCG 155
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ----SALPTEQAPPS 168
HC+++T+ G +++WG C ++ GS+ SF T +Q +P Q
Sbjct: 156 ANHCLALTDDGRLFSWG---CNKYGQL--GLGSSHSFH--DTPQQIVCLRGIPIAQIASG 208
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ R + DE+ P L K+ ++ G HT+ L+
Sbjct: 209 GNHSFILTWSRAVFGWGKNSFGQLGLNDEYDKSHPTLCKSLRNQKVMYISCGEDHTVALT 268
Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
G V+ +G GG GQLG S ++P + ++ GSV
Sbjct: 269 KEGGVFSFGAGGFGQLGHNS-----TQNEILP----------KRVMELMGSV-------- 305
Query: 289 SYVKEIACGGRHS-AVVTDAGALLTF 313
+ ++ACG RH+ A +G + F
Sbjct: 306 --ISQVACGRRHTVAFSPSSGKMYAF 329
>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
terrestris]
Length = 1104
Score = 61.6 bits (148), Expect = 6e-07, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 59/126 (46%), Gaps = 30/126 (23%)
Query: 198 FFTLSPCLV-TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
F SP +V TL + I ++A G +H L L++ G+++ WG EGQLGLG I+ P
Sbjct: 171 FMECSPRMVKTLGTSI-IVQIACGMKHALALTNNGELYSWGSNSEGQLGLGVDIRCEMKP 229
Query: 257 HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
LI L + IACGG HS ++ +GA+ FGWG
Sbjct: 230 KLINTLAGVP------------------------IAFIACGGYHSIAISKSGAI--FGWG 263
Query: 317 --LYGQ 320
+GQ
Sbjct: 264 KNTFGQ 269
Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats.
Identities = 74/260 (28%), Positives = 105/260 (40%), Gaps = 30/260 (11%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWA 114
CG ALA + +G+L +WGS + EGQ L E +P + T A V A A G
Sbjct: 191 ACGMKHALALTNNGELYSWGS-NSEGQLGLGVDIRCEM-KPKLINTLAGVPIAFIACGGY 248
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT-EQAPPSDKRAG 173
H ++++++G ++ WG FG G + L T A G
Sbjct: 249 HSIAISKSGAIFGWG----------KNTFGQLGLNDTQNRNLPYQLQTLRNAKVCYAACG 298
Query: 174 EE-----VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL- 227
EE V + G + P V G +T+++ G RHTL L
Sbjct: 299 EEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALV 358
Query: 228 SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAG 287
G+V+ WG GG GQLG S + TP ++ A +G +Q S + G
Sbjct: 359 PSQGRVYAWGLGGAGQLGNNS-TRSTTTPQVVRGPWVAPNGSSMMDFDKQFSSCTVGYV- 416
Query: 288 RSYVKEIACGGRH--SAVVT 305
VK I GG H + VVT
Sbjct: 417 ---VKHIFTGGDHCFATVVT 433
Score = 44.7 bits (104), Expect = 0.067, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 58 GGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAAAGWA 114
CG +A +E G+L +WGS + EGQ L S E +P + +V+ A G
Sbjct: 137 AACGAYHTIAVNEWGQLFSWGS-NSEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMK 195
Query: 115 HCVSVTEAGEVYTWG 129
H +++T GE+Y+WG
Sbjct: 196 HALALTNNGELYSWG 210
>gi|114598774|ref|XP_001175007.1| PREDICTED: E3 ISG15--protein ligase HERC5-like, partial [Pan
troglodytes]
Length = 207
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 61/121 (50%), Gaps = 25/121 (20%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T +P +V GV + +++AG H++ LS G ++ WG GQLGLG
Sbjct: 83 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLG------------ 130
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
H S KD P L+ +G N V+ +ACGG HSA++T G L TFG G +G
Sbjct: 131 ----HTES-KDYPSLI-EGLDNQK-------VEFVACGGSHSALLTQDGLLFTFGAGKHG 177
Query: 320 Q 320
Q
Sbjct: 178 Q 178
>gi|159038541|ref|YP_001537794.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157917376|gb|ABV98803.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 561
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 117/296 (39%), Gaps = 45/296 (15%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYL-TSG 89
T+P +P+ +PA G + V G +LA + +G ++ WG + GQ Y T+
Sbjct: 130 TTPRSTPVAVDLPA----GTTVTAVAAGDR-HSLAVTSTGTVLAWG-LNVTGQLYDGTTT 183
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
+ TP LP +V AAG AH +++T AG V WG A + G G+
Sbjct: 184 TNSSTPIVVDLPAGTTVTAVAAGNAHSLALTSAGTVLAWG-------ANSSGQLGD-GTT 235
Query: 150 QKDSTGKQSALP---TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT--LSPC 204
ST LP T + + V T A + GD T +P
Sbjct: 236 TPRSTPVAVDLPAGTTISTIAASSSSHSLAVTSTGTMLAWGANFTGQLGDGTITNRSTPV 295
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
V L G +T VA G H+L ++ G + WG G GQLG GS
Sbjct: 296 AVDLPAGTTVTAVATGSGHSLAVTSTGTMLAWGGNGSGQLGDGSTTS------------- 342
Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P+ V AG + V +A G HS +T G +L +G+ GQ
Sbjct: 343 ----SSTPVAVDL-------PAGTT-VTAVAGGAGHSLALTSTGTMLAWGFNTSGQ 386
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 94/263 (35%), Gaps = 52/263 (19%)
Query: 70 GKLITWGSADDEGQSYLTSGK--HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYT 127
G + WG D +S L G + TP LP + ++ AAG H ++VT AG V
Sbjct: 60 GTGLAWG---DNAESQLGDGTTTNRSTPVTVDLPADTTITAVAAGQGHSLAVTSAGTVLA 116
Query: 128 WGWRE--------CVP-SAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA-GEEVV 177
WG P S V D + + + G + +L A G V
Sbjct: 117 WGANSSGQLGDGTTTPRSTPVAVDLPAGTTVTAVAAGDRHSLAVTST--GTVLAWGLNVT 174
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
+ + S +P +V L G +T VAAG H+L L+ G V WG
Sbjct: 175 GQLYDGTTTTNSS-----------TPIVVDLPAGTTVTAVAAGNAHSLALTSAGTVLAWG 223
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
GQLG G+ TP P D P AG + A
Sbjct: 224 ANSSGQLGDGTT-----TPRSTPV------AVDLP-------------AGTTISTIAASS 259
Query: 298 GRHSAVVTDAGALLTFGWGLYGQ 320
HS VT G +L +G GQ
Sbjct: 260 SSHSLAVTSTGTMLAWGANFTGQ 282
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 82/214 (38%), Gaps = 15/214 (7%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+PI L G + V G +LA + +G ++ WG A+ GQ + TP
Sbjct: 188 TPIVVDLPAGTTVTAVAAGNA-HSLALTSAGTVLAWG-ANSSGQLGDGTTTPRSTPVAVD 245
Query: 100 LPT-EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS 158
LP AA+ +H ++VT G + WG A T G G+ ST
Sbjct: 246 LPAGTTISTIAASSSSHSLAVTSTGTMLAWG-------ANFTGQLGD-GTITNRSTPVAV 297
Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSAR----EESENPASGDEFFTLSPCLVTLNPGVKI 214
LP + + T + S G + +P V L G +
Sbjct: 298 DLPAGTTVTAVATGSGHSLAVTSTGTMLAWGGNGSGQLGDGSTTSSSTPVAVDLPAGTTV 357
Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
T VA G H+L L+ G + WG+ GQLG G+
Sbjct: 358 TAVAGGAGHSLALTSTGTMLAWGFNTSGQLGDGT 391
>gi|357502467|ref|XP_003621522.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355496537|gb|AES77740.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 476
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 140/331 (42%), Gaps = 75/331 (22%)
Query: 18 KETVVYMWGY----LPGTSPEKSPILSP--IPARLCG-----GDSWKDVCGGGCG--FAL 64
+++ +Y+WGY G + + P +P +L G W D+ CG
Sbjct: 19 RKSAIYVWGYNQSGQTGRKEKDDQLRIPKQLPPQLFGCPAGLNTRWLDI---ACGREHTA 75
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAAGWAHCVS----- 118
A + G L TWG A++ GQ L G P + E+ VK+ A AHC +
Sbjct: 76 AIASDGLLFTWG-ANEFGQ--LGDGTEERRKHPKKVKQLESEFVKSVACGAHCSACIAEP 132
Query: 119 -----VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS--------ALPTEQA 165
G ++ WG + + + R F G+F+ ++T KQ AL +
Sbjct: 133 RENDGTVSTGRLWVWGQNQ---GSNLPRLFW--GAFEPNTTIKQVSCGAVHVVALSEDGL 187
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
+ + + R T + + +S +F +P LV KIT+V+ G HT
Sbjct: 188 LQAWGYNEQGQLGRGVTCEGLQGARIISSYAKFLDEAPELV------KITRVSCGEYHTA 241
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ-GSVNSSG 284
+SD G+V+ WG G GQLG S L++ D+ L+ R+ S++S
Sbjct: 242 AISDKGEVYTWGLGNMGQLGHTS-------------LQYG----DKELIPRRVVSLDS-- 282
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
++K+ ACGG H+ +T GAL + W
Sbjct: 283 ----IFIKDAACGGVHTCALTQEGAL--YAW 307
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 16/113 (14%)
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
P I +V+ G H + LS+ G + WGY +GQLG G + + +I +A
Sbjct: 163 FEPNTTIKQVSCGAVHVVALSEDGLLQAWGYNEQGQLGRGVTCEGLQGARIIS--SYAKF 220
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ P LV+ + ++CG H+A ++D G + T+G G GQ
Sbjct: 221 LDEAPELVK--------------ITRVSCGEYHTAAISDKGEVYTWGLGNMGQ 259
>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
Length = 1048
Score = 61.2 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 102/270 (37%), Gaps = 83/270 (30%)
Query: 52 WKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAA 110
+K + G C LA +E G+L +WG + +GQ L S E TP + +V+ A
Sbjct: 86 FKKIACGSC-HTLAVNEWGQLFSWG-CNMKGQLGLNSVDCTERTPRMVKALGTSVIVQIA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G H +++T GE+Y+WG S ++ G S TE P
Sbjct: 144 CGIEHSIALTNDGELYSWG------------------SNREGQLGIGSHTVTEIKP---- 181
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
KR ++TL V I +A GG HT+++S
Sbjct: 182 -------KR-------------------------IITL-AAVPIAFIACGGYHTVVISKS 208
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
G V+ WG GQLGL + ++PC + + A Y
Sbjct: 209 GVVFAWGRNTFGQLGLNDTQQ-----RIVPC-----------------QLRTLRNAKVCY 246
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
ACG S +T G + T G G+YGQ
Sbjct: 247 A---ACGEEFSVFLTLDGGVFTCGAGMYGQ 273
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 34/148 (22%)
Query: 206 VTLNPGVK---ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
+ L PG+ K+A G HTL +++ GQ++ WG +GQLGL S TP ++ L
Sbjct: 75 LQLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQLGLNSVDCTERTPRMVKAL 134
Query: 263 ------------EHAASGKDRPLLVRQGSVNSSGK--AGRSYVKE--------------- 293
EH+ + + L GS N G+ G V E
Sbjct: 135 GTSVIVQIACGIEHSIALTNDGELYSWGS-NREGQLGIGSHTVTEIKPKRIITLAAVPIA 193
Query: 294 -IACGGRHSAVVTDAGALLTFGWGLYGQ 320
IACGG H+ V++ +G + +G +GQ
Sbjct: 194 FIACGGYHTVVISKSGVVFAWGRNTFGQ 221
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 62/219 (28%), Positives = 92/219 (42%), Gaps = 34/219 (15%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETP-EPFPLPTEASVVKA--AAGW 113
CG ++A + G+L +WGS + EGQ L G H T +P + T A+V A A G
Sbjct: 143 ACGIEHSIALTNDGELYSWGS-NREGQ--LGIGSHTVTEIKPKRIITLAAVPIAFIACGG 199
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA- 172
H V ++++G V+ WG FG G + +Q +P + + +
Sbjct: 200 YHTVVISKSGVVFAWG----------RNTFGQLGL----NDTQQRIVPCQLRTLRNAKVC 245
Query: 173 ----GEE-----VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
GEE + + G+ + P V G +T+++ G RH
Sbjct: 246 YAACGEEFSVFLTLDGGVFTCGAGMYGQLGHGNGMNEILPRQVMELMGSTVTQISCGKRH 305
Query: 224 TLIL-SDMGQVWGWGYGGEGQLG-LGSRIKMVPTPHLIP 260
TL L G+V+ WG GG GQLG SR P L P
Sbjct: 306 TLALVPSRGRVYAWGLGGAGQLGNRASRSATTPLVVLGP 344
>gi|47214395|emb|CAG00876.1| unnamed protein product [Tetraodon nigroviridis]
Length = 371
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 102/281 (36%), Gaps = 107/281 (38%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +ESGKL WG + EGQ L GK P P + A V + G+ H VT AG
Sbjct: 145 ALTESGKLFMWGD-NTEGQIGL--GKESHAPWPQEVSVGAPVSWVSCGYYHSALVTAAGA 201
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+G RD G G L TEQ P
Sbjct: 202 LYTFG----------ERDSGKLG------------LTTEQLP------------------ 221
Query: 185 AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG------------- 231
R P + G + +VA GG HT+ L+ G
Sbjct: 222 -RHRVPQPVR--------------SIGEPVRQVACGGGHTVALTGGGSTRRRPRCTRGFA 266
Query: 232 ------------QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
+++ +G G GQLG G+ + P L+ EH G+
Sbjct: 267 VDLAGFLWLSEDRLFTFGLGQFGQLGHGTFVFESRLPRLV---EHFKKGR---------- 313
Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+++ACG HSAV+TD G L TFG G +G+
Sbjct: 314 -----------VRQVACGENHSAVITDGGLLYTFGDGRHGK 343
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 55/130 (42%), Gaps = 30/130 (23%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--------RIKMVPTPHLIPCLEH 264
K+ A G HTLI + G+V+ G EGQLGLG RI + + L P
Sbjct: 79 KVLLAACGRNHTLICTGEGRVFSSGGNSEGQLGLGDCEERTTFRRIHALDS--LGPIKML 136
Query: 265 AASGKDRPLLVRQGSV-----NSSGKAGRSY---------------VKEIACGGRHSAVV 304
AA L G + N+ G+ G V ++CG HSA+V
Sbjct: 137 AAGSNTSAALTESGKLFMWGDNTEGQIGLGKESHAPWPQEVSVGAPVSWVSCGYYHSALV 196
Query: 305 TDAGALLTFG 314
T AGAL TFG
Sbjct: 197 TAAGALYTFG 206
>gi|348563524|ref|XP_003467557.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Cavia
porcellus]
Length = 1016
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 109/297 (36%), Gaps = 98/297 (32%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
G PE L +P D+ G +LA GK+ WG D GQ L +G
Sbjct: 69 GKQPEPIQALVNLPV---------DLVSCGKEHSLAVCHKGKVFAWGVGSD-GQ--LGTG 116
Query: 90 KHGET---PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
K E P+ T +++ + G+ H +++++ G+V++WG
Sbjct: 117 KFEEICFIPQKIKALTGIKIIQISCGYYHSLALSKDGQVFSWG----------------- 159
Query: 147 GSFQKDSTGKQ---SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSP 203
K+S G+ P+ QA P R+ E
Sbjct: 160 ----KNSHGQLGLGQEFPS-QASPQRVRSLE----------------------------- 185
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G+ + +VAAGG H+ LS G +GWG GQL
Sbjct: 186 -------GIPLAQVAAGGAHSFALSLSGTSFGWGNNSAGQL------------------- 219
Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
A SG + +LV+ S G V I+CG H+AV+T + TFG +GQ
Sbjct: 220 -AFSGNN--VLVQSYKPRSVGALKNLGVVYISCGYEHTAVLTQNDQVFTFGDNSFGQ 273
>gi|326499730|dbj|BAJ86176.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 165
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 59/121 (48%), Gaps = 23/121 (19%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
LSP V+ GVK+ VAAG HT+ +S G V+ +G GQLG+GS I
Sbjct: 28 VLSPTCVSAILGVKMQDVAAGLWHTVSISADGDVYSFGGNQFGQLGIGSD-----QAETI 82
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
P L A S K++ + ++CG RHSA++TD G + +GW YG
Sbjct: 83 PKLVDAPSLKNKN------------------ARSVSCGARHSAIITDEGEVFCWGWNKYG 124
Query: 320 Q 320
Q
Sbjct: 125 Q 125
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
V+ G RH+ I++D G+V+ WG+ GQLGLG + P ++P
Sbjct: 99 VSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMDR-NVPCIVP 141
>gi|395848168|ref|XP_003796731.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Otolemur
garnettii]
Length = 551
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 39/221 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHVVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVI 207
Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ + S A ++ +SG++ +PC + G+++ +VA
Sbjct: 208 VTIACGQMCSMAVVDTGEVFVWGYNGNGQLGLGSSGNQ---PTPCRIAALQGIRVQRVAC 264
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
G HTL+L+D GQV+ WG GQLG G++ PTP ++
Sbjct: 265 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVV 305
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 258
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 259 VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 288
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K + CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDIQSTIEPRKLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 176 WGYNNSGQ 183
>gi|380012154|ref|XP_003690152.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like,
partial [Apis florea]
Length = 647
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 95/263 (36%), Gaps = 81/263 (30%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G +LA + G + WGS + EGQ L G +P + V + G+ H +
Sbjct: 141 AGSHHSLALTSDGNVFAWGS-NLEGQLGLPDIS-GLVNKPTKVHIPEPVKQINTGYYHSI 198
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
+TE G VY G E S K+ D +F KQ LP
Sbjct: 199 FLTENGLVYVCGESE---SGKLGIDI----NFSTQIVPKQMQLP---------------- 235
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
SP + VA GG HT+IL++ ++ G
Sbjct: 236 ------------------------SP----------VIHVACGGHHTVILTEKDNLYCTG 261
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
GQLGLG+ + + P L+P G + I+CG
Sbjct: 262 SNSSGQLGLGTNVTELHIPKLLP----------------------RGALKNEKISHISCG 299
Query: 298 GRHSAVVTDAGALLTFGWGLYGQ 320
H+A++T++G L T G G +G+
Sbjct: 300 ESHTAILTESGKLYTCGDGRHGK 322
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 25/135 (18%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP---HLIPCLEHAAS 267
G KI ++ AG H+L L+ G V+ WG EGQLGL +V P H+ ++ +
Sbjct: 133 GSKIVQIVAGSHHSLALTSDGNVFAWGSNLEGQLGLPDISGLVNKPTKVHIPEPVKQINT 192
Query: 268 GKDRPLLVRQGSV------NSSGKAGR----------------SYVKEIACGGRHSAVVT 305
G + + + + + SGK G S V +ACGG H+ ++T
Sbjct: 193 GYYHSIFLTENGLVYVCGESESGKLGIDINFSTQIVPKQMQLPSPVIHVACGGHHTVILT 252
Query: 306 DAGALLTFGWGLYGQ 320
+ L G GQ
Sbjct: 253 EKDNLYCTGSNSSGQ 267
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 50/117 (42%), Gaps = 21/117 (17%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
C+ L P K+T VA G HTLI + +++ G EGQLG G I + IP L
Sbjct: 70 CVKVLKPE-KVTHVACGRAHTLICTVAEKIFACGSDQEGQLGRG--ISAIGDSASIPVL- 125
Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V SG G S + +I G HS +T G + +G L GQ
Sbjct: 126 ----------------VYDSGPTG-SKIVQIVAGSHHSLALTSDGNVFAWGSNLEGQ 165
>gi|402901988|ref|XP_003913913.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Papio anubis]
gi|355754693|gb|EHH58594.1| hypothetical protein EGM_08474 [Macaca fascicularis]
Length = 556
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 84/221 (38%), Gaps = 65/221 (29%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P ++ S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 146 VPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPIPRR 202
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ VV A G C++V + GEVY WG + G S+G
Sbjct: 203 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWG-------------YNGNGQLGLGSSGN 249
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
Q PT PC V G+++ +
Sbjct: 250 Q---PT----------------------------------------PCRVAALQGIRVQR 266
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 267 VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 307
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 145 LVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 203
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 204 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 263
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 264 VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 293
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 236
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 237 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 86 GDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 140
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC Q S N S K V E+ACG HS V+T G +
Sbjct: 141 -TNHGLVPC---------------QISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 180
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 181 WGYNNSGQ 188
>gi|297597956|ref|NP_001044792.2| Os01g0846800 [Oryza sativa Japonica Group]
gi|56784032|dbj|BAD82660.1| UVB-resistance protein UVR8-like [Oryza sativa Japonica Group]
gi|56784705|dbj|BAD81831.1| UVB-resistance protein UVR8-like [Oryza sativa Japonica Group]
gi|255673871|dbj|BAF06706.2| Os01g0846800 [Oryza sativa Japonica Group]
Length = 180
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/30 (93%), Positives = 29/30 (96%)
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
VK IACGGRHSAVVTD+GALLTFGWGLYGQ
Sbjct: 5 VKAIACGGRHSAVVTDSGALLTFGWGLYGQ 34
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 23/121 (19%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
LSP V+ GVK+ + AG HT+ S G V+ +G GQLG GS +
Sbjct: 43 VLSPTCVSSILGVKMQDIGAGLWHTVCTSVDGDVYSFGGNQFGQLGTGS-----DQAETV 97
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
P L A+S +++ + ++CG RHSA++TD G + +GW YG
Sbjct: 98 PKLVDASSLENKN------------------ARAVSCGARHSAIITDEGEVFCWGWNKYG 139
Query: 320 Q 320
Q
Sbjct: 140 Q 140
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVP 254
V+ G RH+ I++D G+V+ WG+ GQLGLG + + VP
Sbjct: 114 VSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVP 152
>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Megachile rotundata]
Length = 1135
Score = 61.2 bits (147), Expect = 7e-07, Method: Composition-based stats.
Identities = 47/150 (31%), Positives = 69/150 (46%), Gaps = 38/150 (25%)
Query: 206 VTLNPGVK---ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
+ L PG+ KVA G HTL +++ GQ++ WG EGQLGL S+ + PH++ L
Sbjct: 152 LQLIPGLDAFVFKKVACGAHHTLAVNEWGQLFSWGSNAEGQLGLNSKNLIECVPHMVRAL 211
Query: 263 ------------EHAASGKDRPLLVRQGSVNSSGKAG-----RSYVKE------------ 293
H + + L GS NS G+ G ++ +K
Sbjct: 212 GTSVVVQVACGINHVLALTNNGKLYSWGS-NSDGQLGLGTDVKNEIKPKLISSLAGVPIA 270
Query: 294 -IACGGRHSAVVTDAGALLTFGWG--LYGQ 320
I CGG HS ++ +GA+ FGWG +GQ
Sbjct: 271 FITCGGYHSMAISKSGAV--FGWGKNTFGQ 298
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 53/208 (25%), Positives = 82/208 (39%), Gaps = 18/208 (8%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G LA + +GKL +WGS D T K+ P+ + G H ++
Sbjct: 222 GINHVLALTNNGKLYSWGSNSDGQLGLGTDVKNEIKPKLISSLAGVPIAFITCGGYHSMA 281
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ-APPSDKRAGEE-- 175
++++G V+ WG FG G + L T Q A GEE
Sbjct: 282 ISKSGAVFGWG----------KNTFGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFS 331
Query: 176 ---VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL-ILSDMG 231
V + G+ + P V G +T+++ G RHTL ++ G
Sbjct: 332 VFLTVDGGVFTCGAGMYGQLGHGNTSNEILPRQVMELMGSTVTQISCGKRHTLGLVPSRG 391
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+V+ WG GG GQLG + + V TP ++
Sbjct: 392 RVYAWGLGGAGQLG-NNITRSVATPQVV 418
Score = 44.3 bits (103), Expect = 0.076, Method: Composition-based stats.
Identities = 73/302 (24%), Positives = 114/302 (37%), Gaps = 70/302 (23%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAAAGWAHCV 117
G LA +E G+L +WGS + EGQ L S E P + VV+ A G H +
Sbjct: 169 GAHHTLAVNEWGQLFSWGS-NAEGQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVL 227
Query: 118 SVTEAGEVYTWGW-------------RECVPS-----AKVTRDFGSAGSFQKDSTGKQSA 159
++T G++Y+WG E P A V F + G + + K A
Sbjct: 228 ALTNNGKLYSWGSNSDGQLGLGTDVKNEIKPKLISSLAGVPIAFITCGGYHSMAISKSGA 287
Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ G+ + + R + L L TL K+ A
Sbjct: 288 VFG---------WGKNTFGQLGLNDTRNRN-----------LPRQLQTLQ-NAKVCYAAC 326
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
G ++ L+ G V+ G G GQLG G+ + ++P R ++ GS
Sbjct: 327 GEEFSVFLTVDGGVFTCGAGMYGQLGHGN-----TSNEILP----------RQVMELMGS 371
Query: 280 VNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQ---RMAKCLAGDGINMGS 335
V +I+CG RH+ +V G + +G G GQ + + +A + G
Sbjct: 372 T----------VTQISCGKRHTLGLVPSRGRVYAWGLGGAGQLGNNITRSVATPQVVHGP 421
Query: 336 WV 337
WV
Sbjct: 422 WV 423
>gi|148703915|gb|EDL35862.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
gi|148703916|gb|EDL35863.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
Length = 560
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 39/221 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT++ G++ TWG S L +G P + T S V++ A G
Sbjct: 115 GSGPHIVLATTD-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 170
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 171 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 216
Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ + S A ++ +SG++ +PC V G+++ +VA
Sbjct: 217 MNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ---PTPCRVAALQGIRVQRVAC 273
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
G HTL+L+D GQ++ WG GQLG G++ PTP ++
Sbjct: 274 GYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVV 314
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 149 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 207
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 208 TGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 267
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 268 VQRVACGYAHTLVLTDEGQIYAWGANSYGQ 297
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 182 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGY- 240
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G++Y WG
Sbjct: 241 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 291
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 90 GDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT----- 144
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 145 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 184
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 185 WGYNNSGQ 192
>gi|145594132|ref|YP_001158429.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303469|gb|ABP54051.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 570
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 98/281 (34%), Gaps = 83/281 (29%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P+P L G V G +LA + +G ++ WG +D GQ + TP
Sbjct: 80 TPLPVSLPAGTDATAVVAGDF-HSLALTSAGTVLAWGR-NDSGQLGDGTTVSSSTPVVVR 137
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
LP +V AAG+ H +++T G V WG + FG G
Sbjct: 138 LPVGVTVTAVAAGFGHSLALTSTGVVLAWG----------SNSFGQLG------------ 175
Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
G + +P V L GV +T VAA
Sbjct: 176 ----------------------------------DGTTVSSSTPVAVRLPVGVTVTAVAA 201
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
G H+L L+ +G WG GQLG G+ + P+ VR
Sbjct: 202 GSGHSLALTSVGAALAWGNNFSGQLGDGTTVS-----------------SSTPVAVRL-- 242
Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + V +A G HS +T AGA L +G GQ
Sbjct: 243 -----PVGTT-VTAVAGGSHHSLALTSAGAALAWGGNFSGQ 277
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 85/214 (39%), Gaps = 14/214 (6%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P+ RL G + V G G +LA + +G ++ WGS + GQ + TP
Sbjct: 132 TPVVVRLPVGVTVTAVAAG-FGHSLALTSTGVVLAWGS-NSFGQLGDGTTVSSSTPVAVR 189
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
LP +V AAG H +++T G WG + G G+ ST
Sbjct: 190 LPVGVTVTAVAAGSGHSLALTSVGAALAWG-------NNFSGQLGD-GTTVSSSTPVAVR 241
Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAR----EESENPASGDEFFTLSPCLVTLNPGVKIT 215
LP + + +A S G + +P +V+L G +T
Sbjct: 242 LPVGTTVTAVAGGSHHSLALTSAGAALAWGGNFSGQLGDGTTVSSSTPVVVSLPVGTTVT 301
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
+A G H++ L+ G WG G+GQLG G+
Sbjct: 302 ALAGGDAHSVALTSAGAALAWGSNGDGQLGDGTN 335
>gi|190610056|gb|ACE79739.1| At5g60870 [Arabidopsis thaliana]
Length = 376
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 120/307 (39%), Gaps = 52/307 (16%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHG 92
++S L+ P R+ DS G CG F + G L WG D G+
Sbjct: 14 DQSFSLAQTPGRI-DADSSSFRIGISCGLFHSGLTIDGDLWIWGKGDG-GRLGFGQENSV 71
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW------------RECVPSAKVT 140
P PL E S+ A G H V++T G+V+TWG+ RE VP +
Sbjct: 72 FVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVP--RRV 129
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
D ++G +A TE +GE + R+ R +E
Sbjct: 130 DDSWDCKISAIATSGTHTAAITE--------SGELYMWGREEGDGRLGLGPGRGPNEGGG 181
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-MVPTPHLI 259
LS V + V+ GG T+ L+ GQ+W WG +LG G + P P +
Sbjct: 182 LSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMP--V 239
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
P LE VR + +IACGG HS +T+ G +L++G G +G
Sbjct: 240 PSLEG----------VR--------------ITQIACGGYHSLALTEEGKVLSWGHGGHG 275
Query: 320 QRMAKCL 326
Q + L
Sbjct: 276 QLGSSSL 282
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 97/259 (37%), Gaps = 38/259 (14%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS----VVKAAAGWAHCVS 118
++A + G + TWG + G T E P + S + A H +
Sbjct: 95 SVALTHQGDVFTWGYG-----GFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAA 149
Query: 119 VTEAGEVYTWGWRE--CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+TE+GE+Y WG E R G S K +P
Sbjct: 150 ITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALT 209
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ + + + GD P V GV+IT++A GG H+L L++ G+V W
Sbjct: 210 KEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSW 269
Query: 237 GYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
G+GG GQLG S R + VPT +E A K + IA
Sbjct: 270 GHGGHGQLGSSSLRNQKVPTE-----IEALADKK---------------------IVFIA 303
Query: 296 CGGRHSAVVTDAGALLTFG 314
GG SA +TD G L +G
Sbjct: 304 SGGSSSAAITDGGELWMWG 322
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 77/203 (37%), Gaps = 63/203 (31%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGW 113
CGG F +A ++ G+L WG+ + L G + EP P+P+ + + A G
Sbjct: 200 CGGF--FTMALTKEGQLWNWGANSN---YELGRGDNLGGWEPMPVPSLEGVRITQIACGG 254
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H +++TE G+V +WG G G S Q +PTE +DK
Sbjct: 255 YHSLALTEEGKVLSWG-------------HGGHGQLGSSSLRNQK-VPTEIEALADK--- 297
Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
KI +A+GG + ++D G++
Sbjct: 298 ---------------------------------------KIVFIASGGSSSAAITDGGEL 318
Query: 234 WGWGYGGEGQLGLGSRIKMVPTP 256
W WG + QLG+ ++ TP
Sbjct: 319 WMWGNAKDFQLGVPGLPEIQTTP 341
>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
CCMP2712]
Length = 277
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 103/255 (40%), Gaps = 39/255 (15%)
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA----HCVSVTEAGEVYTW 128
+WG +D T+ G +P P VV A G H +VTE G+VYTW
Sbjct: 1 FSWGFNNDGALGLGTTDAVG-SPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTW 59
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
G + S ++ + G QS E A S A VV + A
Sbjct: 60 GSGK---SGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGS---AHTVVVSKAGLVFAWGW 113
Query: 189 SE--NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
G + P VT GVK+ KVA G HT ++++ G V+ WG+G GQLG
Sbjct: 114 GHFGQLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGH 173
Query: 247 GSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
G + + RP+ V+ K YV +ACG H+ VV++
Sbjct: 174 GDD-----------------ASQSRPMYVK--------KLHGIYVSTLACGLAHTVVVSE 208
Query: 307 AG-ALLTFGWGLYGQ 320
A+ ++GW YGQ
Sbjct: 209 VDRAVFSWGWDEYGQ 223
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 90/258 (34%), Gaps = 36/258 (13%)
Query: 5 GSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFA- 63
G EE ++ VY WG + + RL G + CG A
Sbjct: 39 GGGSEEQHSAAVTEQGQVYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAH 98
Query: 64 -LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+ S++G + WG GQ + S + P V K A G AH VTE+
Sbjct: 99 TVVVSKAGLVFAWGWGH-FGQLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTES 157
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS-----------ALPTEQAPPSDKR 171
G VYTWGW G G QS + T +
Sbjct: 158 GHVYTWGW-------------GVNGQLGHGDDASQSRPMYVKKLHGIYVSTLACGLAHTV 204
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFF----TLSPCLVTLNPGVKITKVAAGGRHTLIL 227
EV + + E + G + F SP P + ++A G +TL L
Sbjct: 205 VVSEVDRAVFSWGWDEYGQLGHGGWDIFGGNKNRSP-----RPIKDLQQIACGSSYTLAL 259
Query: 228 SDMGQVWGWGYGGEGQLG 245
S G V+ +G+G +GQLG
Sbjct: 260 SSRGDVYAFGWGKDGQLG 277
>gi|402901986|ref|XP_003913912.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Papio anubis]
Length = 551
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 84/221 (38%), Gaps = 65/221 (29%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P ++ S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 141 VPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPIPRR 197
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ VV A G C++V + GEVY WG + G S+G
Sbjct: 198 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWG-------------YNGNGQLGLGSSGN 244
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
Q PT PC V G+++ +
Sbjct: 245 Q---PT----------------------------------------PCRVAALQGIRVQR 261
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 262 VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 140 LVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 198
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 259 VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 288
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC Q S N S K V E+ACG HS V+T G +
Sbjct: 136 -TNHGLVPC---------------QISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 176 WGYNNSGQ 183
>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
Length = 1039
Score = 61.2 bits (147), Expect = 7e-07, Method: Composition-based stats.
Identities = 69/266 (25%), Positives = 93/266 (34%), Gaps = 86/266 (32%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAAAGWAH 115
CG ++A E G+ +WGS D GQ G H + P+ +V++ A G H
Sbjct: 94 ACGLQHSMALDEWGQPFSWGS-DSMGQLGSNLGSHAQDKPKIIKTLATKNVIQVACGSYH 152
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V +T G++Y WG A S+ + G +S E P +
Sbjct: 153 TVVLTNNGDLYAWG----------------ANSYGQCGLGNRSN--KETTPQA------- 187
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
LS L G+ I +A G HT LS G V+G
Sbjct: 188 -------------------------LSSIL-----GIPIALIACGSNHTFALSQSGAVFG 217
Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEI 294
WG GQLGL R HL K R+ V I
Sbjct: 218 WGKNSHGQLGLQDRESRCYPTHL--------------------------KTLRNVKVCHI 251
Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQ 320
+CG +A +T G + T G G YGQ
Sbjct: 252 SCGEDFTAFLTLDGGVFTCGAGEYGQ 277
Score = 55.5 bits (132), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 28/121 (23%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLI 259
SP LV G ++ +A G +H++ L + GQ + WG GQLG LGS
Sbjct: 78 SPVLVDTFKGCTLSTIACGLQHSMALDEWGQPFSWGSDSMGQLGSNLGS----------- 126
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
HA +D+P +++ + + V ++ACG H+ V+T+ G L +G YG
Sbjct: 127 ----HA---QDKPKIIKTLATKN--------VIQVACGSYHTVVLTNNGDLYAWGANSYG 171
Query: 320 Q 320
Q
Sbjct: 172 Q 172
>gi|387541132|gb|AFJ71193.1| RCC1 and BTB domain-containing protein 2 [Macaca mulatta]
Length = 551
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 84/221 (38%), Gaps = 65/221 (29%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P ++ S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 141 VPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPIPRR 197
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ VV A G C++V + GEVY WG + G S+G
Sbjct: 198 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWG-------------YNGNGQLGLGSSGN 244
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
Q PT PC V G+++ +
Sbjct: 245 Q---PT----------------------------------------PCRVAALQGIRVQR 261
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 262 VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 140 LVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 198
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 259 VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 288
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC Q S N S K V E+ACG HS V+T G +
Sbjct: 136 -TNHGLVPC---------------QISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 176 WGYNNSGQ 183
>gi|226495691|ref|NP_001141854.1| uncharacterized protein LOC100273996 [Zea mays]
gi|194706180|gb|ACF87174.1| unknown [Zea mays]
Length = 391
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 108/309 (34%), Gaps = 76/309 (24%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA E G+L TWG + K +P P +V+AA G HC++V +
Sbjct: 53 SLAICEDGRLFTWGWNQRGTLGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHCLAVDDN 112
Query: 123 GEVYTWGWRE---------------------------CVPSAKVTRDFGSAGSFQKDSTG 155
G Y WG E C P KV R + G+ T
Sbjct: 113 GHAYAWGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCAPKLKV-RQVAAGGTHSVVLTQ 171
Query: 156 KQSALPTEQA-PPSDKRAGEEVVKRRKTSSAR-----------------------EESEN 191
+ Q PP D + V+ + R E
Sbjct: 172 EGHVWTWGQPWPPGDIKQISTPVRVQGLEKVRVIAVGAFHNLALTEDGILWAWGNNEYGQ 231
Query: 192 PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
+GD P V + + +AAGG H+ L+ G+V+ WG G G+LG G
Sbjct: 232 LGTGDTQPRSHPIRVEGLSDLSLVDIAAGGWHSTALTIQGEVYAWGRGEHGRLGFGDD-- 289
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
+ ++P +G+D + +++CGG HS +T G +
Sbjct: 290 --KSSRMVPLKVELLAGED--------------------IVQVSCGGTHSVALTRDGRMF 327
Query: 312 TFGWGLYGQ 320
++G G +G+
Sbjct: 328 SYGRGDHGR 336
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
D+ + P V L G I +V+ GG H++ L+ G+++ +G G G+LG G ++
Sbjct: 289 DKSSRMVPLKVELLAGEDIVQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKLTT--- 345
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
G D L + S + G+ K +ACGGRH+ +
Sbjct: 346 --------GQPMGVDIDLPPPK---TRSSRDGQWQAKYVACGGRHTLAIV 384
>gi|42568678|ref|NP_200895.2| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|10176914|dbj|BAB10107.1| unnamed protein product [Arabidopsis thaliana]
gi|332010005|gb|AED97388.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 445
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 120/307 (39%), Gaps = 52/307 (16%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHG 92
++S L+ P R+ DS G CG F + G L WG D G+
Sbjct: 83 DQSFSLAQTPGRI-DADSSSFRIGISCGLFHSGLTIDGDLWIWGKGDG-GRLGFGQENSV 140
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW------------RECVPSAKVT 140
P PL E S+ A G H V++T G+V+TWG+ RE VP +
Sbjct: 141 FVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVP--RRV 198
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
D ++G +A TE +GE + R+ R +E
Sbjct: 199 DDSWDCKISAIATSGTHTAAITE--------SGELYMWGREEGDGRLGLGPGRGPNEGGG 250
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-MVPTPHLI 259
LS V + V+ GG T+ L+ GQ+W WG +LG G + P P +
Sbjct: 251 LSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMP--V 308
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
P LE VR + +IACGG HS +T+ G +L++G G +G
Sbjct: 309 PSLEG----------VR--------------ITQIACGGYHSLALTEEGKVLSWGHGGHG 344
Query: 320 QRMAKCL 326
Q + L
Sbjct: 345 QLGSSSL 351
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 97/259 (37%), Gaps = 38/259 (14%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS----VVKAAAGWAHCVS 118
++A + G + TWG + G T E P + S + A H +
Sbjct: 164 SVALTHQGDVFTWGYG-----GFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAA 218
Query: 119 VTEAGEVYTWGWRE--CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+TE+GE+Y WG E R G S K +P
Sbjct: 219 ITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALT 278
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ + + + GD P V GV+IT++A GG H+L L++ G+V W
Sbjct: 279 KEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSW 338
Query: 237 GYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
G+GG GQLG S R + VPT +E A K + IA
Sbjct: 339 GHGGHGQLGSSSLRNQKVPTE-----IEALADKK---------------------IVFIA 372
Query: 296 CGGRHSAVVTDAGALLTFG 314
GG SA +TD G L +G
Sbjct: 373 SGGSSSAAITDGGELWMWG 391
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 77/203 (37%), Gaps = 63/203 (31%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGW 113
CGG F +A ++ G+L WG+ + L G + EP P+P+ + + A G
Sbjct: 269 CGGF--FTMALTKEGQLWNWGANSNY---ELGRGDNLGGWEPMPVPSLEGVRITQIACGG 323
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H +++TE G+V +WG G G S Q +PTE +DK
Sbjct: 324 YHSLALTEEGKVLSWG-------------HGGHGQLGSSSLRNQK-VPTEIEALADK--- 366
Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
KI +A+GG + ++D G++
Sbjct: 367 ---------------------------------------KIVFIASGGSSSAAITDGGEL 387
Query: 234 WGWGYGGEGQLGLGSRIKMVPTP 256
W WG + QLG+ ++ TP
Sbjct: 388 WMWGNAKDFQLGVPGLPEIQTTP 410
>gi|291408944|ref|XP_002720770.1| PREDICTED: regulator of chromosome condensation and BTB domain
containing protein 2 [Oryctolagus cuniculus]
Length = 551
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 107/284 (37%), Gaps = 90/284 (31%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL K C G G LAT+E G++ TWG S L +G P
Sbjct: 89 PRRLDSLSGKKIACLSYGSGPHVVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCQ 144
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG+ +++G+
Sbjct: 145 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY---------------------NNSGQ 183
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
+ PT P + RR T + + +
Sbjct: 184 VGSGPTANQP----------IPRRVTGCLQNKV------------------------VVN 209
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
+A G ++ + D G+V+ WGY G GQLGLGS PTP C A G +R
Sbjct: 210 IACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQ-PTP----CRVAALQG------IR 258
Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 259 --------------VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 288
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 22 VYMWGYLPGTSPEKSPILS-PIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY P + PIP R+ G K V CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGPTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWG-Y 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L SG + TP V + A G+AH + +T+ G+VY WG
Sbjct: 232 NGNGQLGLGSGGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDAQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC Q S N S K V E+ACG HS V+T G +
Sbjct: 136 -TNHGLVPC---------------QISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 176 WGYNNSGQ 183
>gi|282395057|ref|NP_598844.3| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|282396060|ref|NP_001164165.1| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|81880241|sp|Q99LJ7.1|RCBT2_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|13096854|gb|AAH03224.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Mus musculus]
gi|26327151|dbj|BAC27319.1| unnamed protein product [Mus musculus]
gi|148703914|gb|EDL35861.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Mus musculus]
gi|339779805|gb|AEK06433.1| RC/BTB2 [Mus musculus]
gi|339779807|gb|AEK06434.1| RC/BTB2 [Mus musculus]
Length = 551
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 39/221 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT++ G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHIVLATTD-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 207
Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ + S A ++ +SG++ +PC V G+++ +VA
Sbjct: 208 MNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ---PTPCRVAALQGIRVQRVAC 264
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
G HTL+L+D GQ++ WG GQLG G++ PTP ++
Sbjct: 265 GYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVV 305
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 259 VQRVACGYAHTLVLTDEGQIYAWGANSYGQ 288
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G++Y WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 176 WGYNNSGQ 183
>gi|124359876|gb|ABN06170.1| Regulator of chromosome condensation/beta-lactamase-inhibitor
protein II [Medicago truncatula]
Length = 444
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 108/305 (35%), Gaps = 73/305 (23%)
Query: 60 CG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
CG F G L WG D L G P P +V A G H V+
Sbjct: 108 CGLFHSCLVVDGGLWVWGKGDG---GRLGLGHESSMFVPTLNPHLENVKSVALGGLHSVA 164
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+T AGEV+TWG+ FG+ G S E P K A E +K
Sbjct: 165 LTSAGEVFTWGYG----------GFGALG---------HSVYTRELFPRLVKGAWEGTIK 205
Query: 179 RRKTSSA---------------REESENPASG------DEFFTLS-PCLVTLNPGVKITK 216
TS A REE E D LS PC V P +
Sbjct: 206 HIATSGAHTAAVTESGDLYIWGREEGEGRLGLGPGRGPDHAGGLSIPCKVKELP-FPVAA 264
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVPTPHLIPCLEHAASGKDR 271
V+ GG TL L++ GQ+W WG +LG G RI + VP+ + ++ A+ G
Sbjct: 265 VSCGGFFTLALTEEGQLWNWGANSNYELGRGDRIGGWRPRPVPSLEKVRVIQIASGGYHS 324
Query: 272 PLLVRQGSVNS----------------------SGKAGRSYVKEIACGGRHSAVVTDAGA 309
L G V S ++ I+CGG SA VTD G
Sbjct: 325 LALTDDGKVLSWGHGGQGQLGHGSVENQKIPTLVEAIAHEHIIYISCGGASSAAVTDEGK 384
Query: 310 LLTFG 314
L +G
Sbjct: 385 LYMWG 389
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 29/111 (26%)
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
N GV++ ++ G H+ ++ D G +W WG G G+LGLG M P L P LE+
Sbjct: 99 NKGVEV-GISCGLFHSCLVVD-GGLWVWGKGDGGRLGLGHESSMF-VPTLNPHLEN---- 151
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
VK +A GG HS +T AG + T+G+G +G
Sbjct: 152 ----------------------VKSVALGGLHSVALTSAGEVFTWGYGGFG 180
>gi|57242759|ref|NP_060661.3| RCC1 and BTB domain-containing protein 1 [Homo sapiens]
gi|114649667|ref|XP_001155108.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 3 [Pan
troglodytes]
gi|397476979|ref|XP_003809865.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pan paniscus]
gi|74751227|sp|Q8NDN9.1|RCBT1_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
Full=Chronic lymphocytic leukemia deletion region gene 7
protein; Short=CLL deletion region gene 7 protein;
AltName: Full=Regulator of chromosome condensation and
BTB domain-containing protein 1
gi|21739270|emb|CAD38683.1| hypothetical protein [Homo sapiens]
gi|117646918|emb|CAL37574.1| hypothetical protein [synthetic construct]
gi|208965426|dbj|BAG72727.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [synthetic construct]
gi|410208766|gb|JAA01602.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410264076|gb|JAA20004.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410293802|gb|JAA25501.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410338539|gb|JAA38216.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
Length = 531
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 116/321 (36%), Gaps = 89/321 (27%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEV+ WG+ C G GS ST Q P K +KR
Sbjct: 144 AADGEVFAWGYNNC----------GQVGS---GSTANQ--------PTPRKVTNCLHIKR 182
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+ +A G ++ + D G+V+GWGY
Sbjct: 183 ----------------------------------VVGIACGQTSSMAVLDNGEVYGWGYN 208
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G GQLGLG+ + TP VR +++S V +I CG
Sbjct: 209 GNGQLGLGNNGNQL-TP------------------VRVAALHSVC------VNQIVCGYA 243
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
H+ +TD G L +G YGQ
Sbjct: 244 HTLALTDEGLLYAWGANTYGQ 264
>gi|337751269|ref|YP_004645431.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
KNP414]
gi|336302458|gb|AEI45561.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
KNP414]
Length = 404
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 115/269 (42%), Gaps = 50/269 (18%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS----VVKAAAGWAHCVSV 119
LA ++ G + WG Y + G+ E + P + + +V+ + G H +++
Sbjct: 97 LAITKHGTVWGWG--------YNSKGEITEGGKNIARPVQINGLKDIVQVSTGLVHSLAL 148
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
++G V++WG E + +G G + T + S++PT+ S+ A E +
Sbjct: 149 DQSGAVWSWG--ENI--------YGQLG----NGTNQDSSIPTKVEFLSNIVAIEAGAEH 194
Query: 180 RKTSS--------AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
S R E +G+ + P LV +++ +A G H+L L G
Sbjct: 195 SLALSNDGKVWAWGRNEFGQLGNGETEKSNIPRLVKNLENIEM--IAGGDNHSLALDHDG 252
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
+W WGY GQ+G GS + G+ R + V +G G+ V
Sbjct: 253 AIWAWGYNSNGQIGDGS------------SNVYEKDGQLREKRNKTEPVKLNGLYGK--V 298
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
K+++ G +HS +T+ G + +GW YGQ
Sbjct: 299 KQVSAGIKHSTALTENGEVYAWGWNEYGQ 327
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 132/341 (38%), Gaps = 58/341 (17%)
Query: 17 CKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLIT 74
K V+ WGY + P ++ G KD+ G +LA +SG + +
Sbjct: 100 TKHGTVWGWGYNSKGEITEGGKNIARPVQING---LKDIVQVSTGLVHSLALDQSGAVWS 156
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC- 133
WG + GQ L +G + ++ P + +++V AG H ++++ G+V+ WG E
Sbjct: 157 WGE-NIYGQ--LGNGTNQDSSIPTKVEFLSNIVAIEAGAEHSLALSNDGKVWAWGRNEFG 213
Query: 134 ------VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ-------APPSDKRAGEEVVKRR 180
+ + R + + + + G +L + S+ + G+
Sbjct: 214 QLGNGETEKSNIPRLVKNLENIEMIAGGDNHSLALDHDGAIWAWGYNSNGQIGDGSSNVY 273
Query: 181 KTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
+ E N P + G K+ +V+AG +H+ L++ G+V+ WG+
Sbjct: 274 EKDGQLREKRNKTE--------PVKLNGLYG-KVKQVSAGIKHSTALTENGEVYAWGWNE 324
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
GQLG GS KD + +R GRS + +I G H
Sbjct: 325 YGQLGNGSM-------------------KDSKVPLRN-------NVGRSII-DIETGSYH 357
Query: 301 SAVVTDAGALLTFGWGLYGQRMAKCLAGDGINMGSWVWVTP 341
S V ++G + +G YGQ DG + V + P
Sbjct: 358 SFAVDESGVIYAWGDATYGQLGDGTFGKDGNRITYMVRMNP 398
>gi|303320911|ref|XP_003070450.1| Regulator of chromosome condensation family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240110146|gb|EER28305.1| Regulator of chromosome condensation family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 580
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 87/229 (37%), Gaps = 59/229 (25%)
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST- 154
P L + VV+ A G HCV++T ++YTWG + G+ +D+T
Sbjct: 170 NPLLLADKIGVVQIATGGMHCVALTHDNKIYTWGVND-------------QGALGRDTTW 216
Query: 155 -GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK 213
GK + + + + + +E + P D F G
Sbjct: 217 EGKLKDIDDAGSDSDSDDGSDSGM------NPKEATPTPIPADYF----------PEGTI 260
Query: 214 ITKVAAGGRHTLILSDMGQVWGWG--YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+VAAG + L+D G V+GWG G EG LG + ++ TP LIP L+
Sbjct: 261 FVEVAAGDSSSFALTDDGFVYGWGTFRGNEGILGFDATTRVQTTPKLIPSLKK------- 313
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+K IACG H+ + GA+ +G G Q
Sbjct: 314 -------------------IKHIACGDNHALALDTKGAVFAWGSGQQNQ 343
>gi|342182230|emb|CCC91709.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 612
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 76/294 (25%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQS------YL 86
P++ P+ PA G FA+A + ++ WG+ ++ GQS +
Sbjct: 234 PQRIPLFERCPAVHVAA---------GFAFAMAVTADHRVYFWGN-NNHGQSGLGREYFR 283
Query: 87 TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
S + E P PL +V+ + G + + G +Y+WG +C+
Sbjct: 284 PSSRKVEGPTLVPLLDGKEIVQLSCGSFFTLGLGRDGTLYSWGLLDCL------------ 331
Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLV 206
G ++ + + A PS +V R +S R L P +V
Sbjct: 332 ------GLGTEAEVRSSIADPS-------IVSRSLSSEER-----------VVVLEPQVV 367
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA 266
+ K+ +V AG H+ +S G+++ WG G +G+LG G+ ++
Sbjct: 368 RVPTEHKLVRVHAGQWHSGAISSTGELFTWGIGFQGRLGHGNTEPVL------------- 414
Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
RP VR G +V ++ACG H+ +TD G++ +G GQ
Sbjct: 415 ----RPKRVR-------GALADRHVVDVACGSFHTVALTDCGSVYCWGDNTSGQ 457
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 95/284 (33%), Gaps = 92/284 (32%)
Query: 22 VYMWG-------------YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSE 68
VY WG + P + + P L P+ L G + + CG F L
Sbjct: 264 VYFWGNNNHGQSGLGREYFRPSSRKVEGPTLVPL---LDGKEIVQLSCGSF--FTLGLGR 318
Query: 69 SGKLITWGSADDEGQ-------------SYLTSGKHGET------PEPFPLPTEASVVKA 109
G L +WG D G S ++ E P+ +PTE +V+
Sbjct: 319 DGTLYSWGLLDCLGLGTEAEVRSSIADPSIVSRSLSSEERVVVLEPQVVRVPTEHKLVRV 378
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
AG H +++ GE++TWG G G +T
Sbjct: 379 HAGQWHSGAISSTGELFTWG-------------IGFQGRLGHGNT--------------- 410
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
E V++ ++ A + + VA G HT+ L+D
Sbjct: 411 ----EPVLRPKRVRGALADRH-----------------------VVDVACGSFHTVALTD 443
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
G V+ WG GQ G+ + +P+ + LE A G R +
Sbjct: 444 CGSVYCWGDNTSGQCGMRWTTDTITSPNRVVNLEFIAGGVARSI 487
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 197 EFFTLSPCLVTLNP-GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS------- 248
F +P LV + P G + VA G +T +L+ G ++ +G GQLGLGS
Sbjct: 164 RFDNNTPSLVRVVPFGSSVVDVALGADYTCVLTSKGDIYTFGGCDWGQLGLGSASYVEQH 223
Query: 249 ---RIKMVPTPHLIPCLE-----HAASG 268
+ +V P IP E H A+G
Sbjct: 224 PYKEVSVVRVPQRIPLFERCPAVHVAAG 251
>gi|332238752|ref|XP_003268565.1| PREDICTED: RCC1 domain-containing protein 1 [Nomascus leucogenys]
Length = 376
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G AL +G++ +WG GQ L G EP L +V A AAG H
Sbjct: 166 GAEHALLLDAAGRVFSWGGGR-HGQ--LGHGTLEAELEPRLLEALQGLVMAEVAAGGWHS 222
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V V+E G++Y WGW E A TR+ G + +++T E+
Sbjct: 223 VCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREAT----------------ELNED 266
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ ++T A + + P + F P L+ L G K + G RHT +++ G+++
Sbjct: 267 GSQVKRTGGAEDGAPAPFIAVQPF---PALLDLPLGSDAVKASCGSRHTAVVTRTGELYT 323
Query: 236 WGYGGEGQLG 245
WG+G GQLG
Sbjct: 324 WGWGKYGQLG 333
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 17/135 (12%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L +R + +
Sbjct: 199 LEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETV- 256
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK---------------EIACGGRHSAVVT 305
E +D + R G A V+ + +CG RH+AVVT
Sbjct: 257 AREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPLGSDAVKASCGSRHTAVVT 316
Query: 306 DAGALLTFGWGLYGQ 320
G L T+GWG YGQ
Sbjct: 317 RTGELYTWGWGKYGQ 331
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 27/131 (20%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P L P ++ ++ G H L+L G+V+ WG G GQLG G+ ++ P L+
Sbjct: 148 APFYRPLAPELRARQLELGAEHALLLDAAGRVFSWGGGRHGQLGHGT-LEAELEPRLLEA 206
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQR 321
L QG V + E+A GG HS V++ G + +GW GQ
Sbjct: 207 L--------------QGLV----------MAEVAAGGWHSVCVSETGDIYIWGWNESGQL 242
Query: 322 M--AKCLAGDG 330
+ LA DG
Sbjct: 243 ALPTRNLAEDG 253
>gi|313221348|emb|CBY32102.1| unnamed protein product [Oikopleura dioica]
Length = 1199
Score = 60.8 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 64/258 (24%), Positives = 100/258 (38%), Gaps = 39/258 (15%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
F++A +ESG L WG + + G+ E P+ SVV+ A G HC+++TE
Sbjct: 92 FSIAIAESGLLFGWGRSLN-GELMCKQDSLHE-PKLLDKIMHWSVVQVACGAQHCIALTE 149
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGS----FQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
G + +WG + G S + +A P Q +G
Sbjct: 150 EGTILSWG-------SNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSP 202
Query: 178 KRRKTSSAREESENPASGD-EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ + G+ + F SP LV ++ VA G H++ + G V+ W
Sbjct: 203 SGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSW 262
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G+GG GQLG S A + + ++ G+ V +I C
Sbjct: 263 GHGGNGQLGHNSM---------------ANVTQPKKIMELMGTT----------VCQICC 297
Query: 297 GGRHSAVVTDAGALLTFG 314
G RH+ +TD LL FG
Sbjct: 298 GRRHTISLTDKRKLLGFG 315
>gi|281202576|gb|EFA76778.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 2305
Score = 60.8 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 69/263 (26%), Positives = 106/263 (40%), Gaps = 55/263 (20%)
Query: 69 SGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYT 127
S L+TWGS + + K + TPE P + + + G + ++TE G+VY
Sbjct: 541 SRGLMTWGSGSYCKLGFKSVEKDSQPTPERLPNFNISDICSISCGSYYSAALTENGDVYM 600
Query: 128 WGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV-------KRR 180
WG R V + + G+ G+F +Q P + +E+V
Sbjct: 601 WG-RGSVKNPPIA-TLGN-GTFD------------DQLLPQKVESLQEIVVISIGFYHSA 645
Query: 181 KTSSARE-------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
S E E GD F P +V +T+V G +HT+ L+ G+V
Sbjct: 646 AVKSNGELLTWGCGEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTKNGKV 705
Query: 234 WGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
+ WG GQLGLG K TP L+ L+ + ++ +
Sbjct: 706 FTWGTSEYGQLGLGDTQKNC-TPMLVTSLD------------------------KYHIIQ 740
Query: 294 IACGGRHSAVVTDAGALLTFGWG 316
IACG H+AV+T+ +L FG G
Sbjct: 741 IACGATHNAVLTNNREVLVFGNG 763
Score = 58.9 bits (141), Expect = 4e-06, Method: Composition-based stats.
Identities = 75/315 (23%), Positives = 117/315 (37%), Gaps = 50/315 (15%)
Query: 41 PIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
P P RL + D+C CG ++ A +E+G + WG + T G +
Sbjct: 566 PTPERLPNFNI-SDICSISCGSYYSAALTENGDVYMWGRGSVKNPPIATLGNGTFDDQLL 624
Query: 99 PLPTEA--SVVKAAAGWAHCVSVTEAGEVYTWGWRE----------CVPSAKVTRDFGSA 146
P E+ +V + G+ H +V GE+ TWG E P KV + S
Sbjct: 625 PQKVESLQEIVVISIGFYHSAAVKSNGELLTWGCGEDGQLGHGDVFNQPIPKVVQSITSH 684
Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLV 206
Q K + T+ + + E GD +P LV
Sbjct: 685 WVTQVQCGEKHTICLTKNG--------------KVFTWGTSEYGQLGLGDTQKNCTPMLV 730
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE-GQLGLGSRIKMVP----------- 254
T I ++A G H +L++ +V +G G G + S MVP
Sbjct: 731 TSLDKYHIIQIACGATHNAVLTNNREVLVFGNGAAMGSANIISIPIMVPSLKIMNIERLS 790
Query: 255 -----TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY----VKEIACGGRHSAVVT 305
T L C + G + L G+ + K + +++I+CGGRH A +T
Sbjct: 791 CGHYSTAALTECGDVYTWGSGQELGHGHGTSEAHPKLVETLRNQSIRQISCGGRHMAFLT 850
Query: 306 DAGALLTFGWGLYGQ 320
D+G + T G +GQ
Sbjct: 851 DSGKIYTSGKDPFGQ 865
Score = 41.2 bits (95), Expect = 0.70, Method: Composition-based stats.
Identities = 62/255 (24%), Positives = 99/255 (38%), Gaps = 51/255 (20%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG + +++GK+ TWG+++ GQ L + TP + +++ A G H
Sbjct: 691 CGEKHTICLTKNGKVFTWGTSE-YGQLGLGDTQKNCTPMLVTSLDKYHIIQIACGATHNA 749
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF-----QKDSTGKQS-ALPTEQAPPSDKR 171
+T EV +G + SA + S ++ S G S A TE
Sbjct: 750 VLTNNREVLVFGNGAAMGSANIISIPIMVPSLKIMNIERLSCGHYSTAALTECGDVYTWG 809
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+G+E+ TS A P LV I +++ GGRH L+D G
Sbjct: 810 SGQELGHGHGTSEAH----------------PKLVETLRNQSIRQISCGGRHMAFLTDSG 853
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
+++ G GQLG HAA ++RP ++S K +
Sbjct: 854 KIYTSGKDPFGQLG------------------HAAGDQNRP-----KKIDSLLK---TTF 887
Query: 292 KEIACGGRHSAVVTD 306
I+CG H+A + D
Sbjct: 888 MSISCGENHNAALFD 902
>gi|13699242|gb|AAK38372.1|AF334406_1 CLLL7 protein [Homo sapiens]
gi|14275565|emb|CAC40027.1| guanine nucleotide exchange factor [Homo sapiens]
gi|21756194|dbj|BAC04833.1| unnamed protein product [Homo sapiens]
gi|119629234|gb|EAX08829.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Homo sapiens]
Length = 531
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 116/321 (36%), Gaps = 89/321 (27%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEV+ WG+ C G GS ST Q P K +KR
Sbjct: 144 AADGEVFAWGYNNC----------GQVGS---GSTANQ--------PTPRKVTNCLHIKR 182
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+ +A G ++ + D G+V+GWGY
Sbjct: 183 ----------------------------------VVGIACGQTSSMAVLDNGEVYGWGYN 208
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G GQLGLG+ + TP VR +++S V +I CG
Sbjct: 209 GNGQLGLGNNGNQL-TP------------------VRVAALHSVC------VNQIVCGYA 243
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
H+ +TD G L +G YGQ
Sbjct: 244 HTLALTDEGLLYAWGANTYGQ 264
>gi|218779101|ref|YP_002430419.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218760485|gb|ACL02951.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 671
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 97/241 (40%), Gaps = 21/241 (8%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA--SVVKAAAGWAHC 116
G F+L G + +WG +Y T G P EA + V AAG H
Sbjct: 135 GTQFSLGLKTDGTVWSWGC-----NTYATLGLGDRVDRNTPQKVEALSNAVALAAGDDHT 189
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++T G V++WGW + GS +ST K+ + + + +
Sbjct: 190 LALTRDGSVWSWGW-----NYNGQLGLGSIHEDTYESTPKKVEAISNVTAIAAQTYHTQA 244
Query: 177 VKRRKT--SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+ R S + GD+ +P V + + AGG H+L ++ GQVW
Sbjct: 245 LTRDGNVWSWGSNDFGQLGMGDQNDRDAPQKVEALS--NVVAINAGGNHSLAVTRDGQVW 302
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA---SGKDRPL-LVRQGSVNSSGKAGRSY 290
WG EGQLGLG P + L + +G D L L R GSV + GK GR
Sbjct: 303 AWGENSEGQLGLGDLWDR-DAPQKVEALSNVVAINAGGDHTLALTRDGSVWAWGKNGRGQ 361
Query: 291 V 291
+
Sbjct: 362 I 362
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 114/288 (39%), Gaps = 58/288 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
+A ++ G L TWG DD L G G+ P L ++VV A G H ++V+ G
Sbjct: 1 MAVTQGGALWTWGGNDD---GRLGIGATGDQNLPVQLSYLSNVVSLAGGEKHSLAVSGDG 57
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
V++WG SAG +S S L AP +G++ T
Sbjct: 58 SVWSWG-------------SNSAGQLGVESLTPASVL----APVHALYSGDDFHLFYDTD 100
Query: 184 -SAREESENPASGDEFFT---LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+ + D F T LS C G + +AAG + +L L G VW WG
Sbjct: 101 GDGTGDICDDCPYDPFKTAPGLSGC------GNAVPMLAAGTQFSLGLKTDGTVWSWGCN 154
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPL-LVRQGSV-----NSSGKAGRSY 290
LGLG R+ TP + L +A A+G D L L R GSV N +G+ G
Sbjct: 155 TYATLGLGDRVDR-NTPQKVEALSNAVALAAGDDHTLALTRDGSVWSWGWNYNGQLGLGS 213
Query: 291 VKE------------------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ E IA H+ +T G + ++G +GQ
Sbjct: 214 IHEDTYESTPKKVEAISNVTAIAAQTYHTQALTRDGNVWSWGSNDFGQ 261
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 97/241 (40%), Gaps = 32/241 (13%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+P+K LS A G D LA + G + +WG + GQ L S
Sbjct: 168 NTPQKVEALSNAVALAAGDD-----------HTLALTRDGSVWSWG-WNYNGQLGLGS-I 214
Query: 91 HGETPEPFPLPTEA--SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG- 147
H +T E P EA +V AA H ++T G V++WG + DFG G
Sbjct: 215 HEDTYESTPKKVEAISNVTAIAAQTYHTQALTRDGNVWSWG----------SNDFGQLGM 264
Query: 148 --SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS-GDEFFTLSPC 204
+D+ K AL A + V + + + E SE GD + +P
Sbjct: 265 GDQNDRDAPQKVEALSNVVAINAGGNHSLAVTRDGQVWAWGENSEGQLGLGDLWDRDAPQ 324
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP-HLIPCLE 263
V + + AGG HTL L+ G VW WG G GQ+G G + P H+I E
Sbjct: 325 KVEALS--NVVAINAGGDHTLALTRDGSVWAWGKNGRGQIGTGEGQSLYNEPVHVIYSDE 382
Query: 264 H 264
+
Sbjct: 383 N 383
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 53/130 (40%), Gaps = 26/130 (20%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--RIKMVPTPHLIPCLEH----AASGKD 270
+AAG HTL L+ G VW WG+ GQLGLGS TP + + + AA
Sbjct: 182 LAAGDDHTLALTRDGSVWSWGWNYNGQLGLGSIHEDTYESTPKKVEAISNVTAIAAQTYH 241
Query: 271 RPLLVRQGSV-----NSSGKAGR---------------SYVKEIACGGRHSAVVTDAGAL 310
L R G+V N G+ G S V I GG HS VT G +
Sbjct: 242 TQALTRDGNVWSWGSNDFGQLGMGDQNDRDAPQKVEALSNVVAINAGGNHSLAVTRDGQV 301
Query: 311 LTFGWGLYGQ 320
+G GQ
Sbjct: 302 WAWGENSEGQ 311
>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
florea]
Length = 1081
Score = 60.8 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 47/150 (31%), Positives = 68/150 (45%), Gaps = 38/150 (25%)
Query: 206 VTLNPGVK---ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
+ L PG+ K A G HTL +++ GQ++ WG EGQLGL S+ M +P ++ L
Sbjct: 102 LQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTL 161
Query: 263 ------------EHAASGKDRPLLVRQGSVNSSGKAGRSY------------------VK 292
+HA + + L GS NS G+ G +
Sbjct: 162 GTSVVVQIACGMKHAFALTNNGELYSWGS-NSEGQLGLGTDIKYEIKPKFISAFIGIPIA 220
Query: 293 EIACGGRHSAVVTDAGALLTFGWG--LYGQ 320
IACGG HS ++ +GA+ FGWG +GQ
Sbjct: 221 FIACGGYHSIAISKSGAV--FGWGKNTFGQ 248
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 69/252 (27%), Positives = 100/252 (39%), Gaps = 26/252 (10%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYL-TSGKHGETPEPFPLPTEASVVKAAAGWAH 115
CG A A + +G+L +WGS + EGQ L T K+ P+ + A G H
Sbjct: 170 ACGMKHAFALTNNGELYSWGS-NSEGQLGLGTDIKYEIKPKFISAFIGIPIAFIACGGYH 228
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ-APPSDKRAGE 174
++++++G V+ WG FG G L T Q A GE
Sbjct: 229 SIAISKSGAVFGWG----------KNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGE 278
Query: 175 E-----VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL-S 228
E V + G + P V G +T+++ G RHTL L
Sbjct: 279 EFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVP 338
Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
G+V+ WG GG GQLG S + V TP ++ A +G + +Q + + G
Sbjct: 339 SRGRVYAWGLGGAGQLGNHS-TRSVTTPQVVHGPWIAPNGSTIMDVNKQFNSRTIG---- 393
Query: 289 SYVKEIACGGRH 300
VK I GG H
Sbjct: 394 YIVKHIFTGGDH 405
Score = 45.1 bits (105), Expect = 0.048, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 58 GGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTEASVVKAAAGWA 114
CG LA +E G+L +WGS + EGQ L S E+ P + VV+ A G
Sbjct: 116 AACGAYHTLAINEWGQLFSWGS-NTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMK 174
Query: 115 HCVSVTEAGEVYTWG 129
H ++T GE+Y+WG
Sbjct: 175 HAFALTNNGELYSWG 189
Score = 40.8 bits (94), Expect = 1.0, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 34/150 (22%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P + +I ++A G +T++++ +G+++ G GQLG K + LIP
Sbjct: 50 LIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGNNDYGQLGHEKGRKRL---QLIP 106
Query: 261 CLE-----HAASGKDRPLLVRQ-------GSVNSSGK------------------AGRSY 290
L+ AA G L + + GS N+ G+ G S
Sbjct: 107 GLDAFVFKKAACGAYHTLAINEWGQLFSWGS-NTEGQLGLNSKNFMESSPRMVKTLGTSV 165
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V +IACG +H+ +T+ G L ++G GQ
Sbjct: 166 VVQIACGMKHAFALTNNGELYSWGSNSEGQ 195
>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
mellifera]
Length = 1081
Score = 60.8 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 47/150 (31%), Positives = 68/150 (45%), Gaps = 38/150 (25%)
Query: 206 VTLNPGVK---ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
+ L PG+ K A G HTL +++ GQ++ WG EGQLGL S+ M +P ++ L
Sbjct: 102 LQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTL 161
Query: 263 ------------EHAASGKDRPLLVRQGSVNSSGKAGRSY------------------VK 292
+HA + + L GS NS G+ G +
Sbjct: 162 GTSVVVQIACGMKHAFALTNNGELYSWGS-NSEGQLGLGTDTKYEIKPKFISAFIGIPIA 220
Query: 293 EIACGGRHSAVVTDAGALLTFGWG--LYGQ 320
IACGG HS ++ +GA+ FGWG +GQ
Sbjct: 221 FIACGGYHSIAISKSGAV--FGWGKNTFGQ 248
Score = 54.3 bits (129), Expect = 8e-05, Method: Composition-based stats.
Identities = 69/252 (27%), Positives = 100/252 (39%), Gaps = 26/252 (10%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYL-TSGKHGETPEPFPLPTEASVVKAAAGWAH 115
CG A A + +G+L +WGS + EGQ L T K+ P+ + A G H
Sbjct: 170 ACGMKHAFALTNNGELYSWGS-NSEGQLGLGTDTKYEIKPKFISAFIGIPIAFIACGGYH 228
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ-APPSDKRAGE 174
++++++G V+ WG FG G L T Q A GE
Sbjct: 229 SIAISKSGAVFGWG----------KNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGE 278
Query: 175 E-----VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL-S 228
E V + G + P V G +T+++ G RHTL L
Sbjct: 279 EFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVP 338
Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
G+V+ WG GG GQLG S + V TP ++ A +G + +Q + + G
Sbjct: 339 SRGRVYAWGLGGAGQLGNHS-TRSVTTPQVVHGPWIAPNGSTIMDVNKQFNSRTIG---- 393
Query: 289 SYVKEIACGGRH 300
VK I GG H
Sbjct: 394 YIVKHIFTGGDH 405
Score = 45.1 bits (105), Expect = 0.048, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 58 GGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTEASVVKAAAGWA 114
CG LA +E G+L +WGS + EGQ L S E+ P + VV+ A G
Sbjct: 116 AACGAYHTLAINEWGQLFSWGS-NTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMK 174
Query: 115 HCVSVTEAGEVYTWG 129
H ++T GE+Y+WG
Sbjct: 175 HAFALTNNGELYSWG 189
Score = 40.8 bits (94), Expect = 1.0, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 34/150 (22%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P + +I ++A G +T++++ +G+++ G GQLG K + LIP
Sbjct: 50 LIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGNNDYGQLGHEKGRKRL---QLIP 106
Query: 261 CLE-----HAASGKDRPLLVRQ-------GSVNSSGK------------------AGRSY 290
L+ AA G L + + GS N+ G+ G S
Sbjct: 107 GLDAFVFKKAACGAYHTLAINEWGQLFSWGS-NTEGQLGLNSKNFMESSPRMVKTLGTSV 165
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V +IACG +H+ +T+ G L ++G GQ
Sbjct: 166 VVQIACGMKHAFALTNNGELYSWGSNSEGQ 195
>gi|148922863|ref|NP_001092233.1| uncharacterized protein LOC100073325 [Danio rerio]
gi|146218416|gb|AAI39898.1| Zgc:163136 protein [Danio rerio]
Length = 994
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+ + +++AGG H+ +LS G V+GWG GQLGLG T IP + + SGK
Sbjct: 169 IPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGD-----TTDRFIPTIVKSLSGKK- 222
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
I+CGG H+A ++ G + TFG G +GQ
Sbjct: 223 -------------------TVSISCGGEHTATLSKGGTVFTFGSGGFGQ 252
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 26/127 (20%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GD P +V G K ++ GG HT LS G V+ +G GG GQLG
Sbjct: 204 GDTTDRFIPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLG--------- 254
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD-AGALLTF 313
++ + P LV + S V ++ CG H+ V D + + +F
Sbjct: 255 --------HNSLKDEHHPRLV--------AELWGSKVSQVTCGRHHTLVFEDSSNRIYSF 298
Query: 314 GWGLYGQ 320
G G+ GQ
Sbjct: 299 GCGMQGQ 305
>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 1044
Score = 60.8 bits (146), Expect = 9e-07, Method: Composition-based stats.
Identities = 47/139 (33%), Positives = 66/139 (47%), Gaps = 35/139 (25%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAAS 267
+ITK++ GG HTL ++ GQ++GWG GQLG + P P +I L +
Sbjct: 85 RITKISCGGNHTLAFNEWGQLFGWGSDSHGQLGFNGTTQ--PLPKIIKSLATFHIVQISC 142
Query: 268 GKDRPL-LVRQGSV-----NSSGKAG---RS-YVKE--------------IACGGRHSAV 303
GK+ L L G + N G+ G RS Y K+ IACG HS
Sbjct: 143 GKNHSLALTNNGELYSWGGNYDGQLGLGMRSEYEKQPTLIKSLLGIPIAFIACGSNHSFA 202
Query: 304 VTDAGALLTFGWG--LYGQ 320
++ +GA+ +GWG YGQ
Sbjct: 203 LSKSGAI--YGWGKNTYGQ 219
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 28/135 (20%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASG 268
I +++ G H+L L++ G+++ WG +GQLGLG R + P LI L A G
Sbjct: 137 IVQISCGKNHSLALTNNGELYSWGGNYDGQLGLGMRSEYEKQPTLIKSLLGIPIAFIACG 196
Query: 269 KDRPL-LVRQGSV-----NSSGKAG----------------RSY-VKEIACGGRHSAVVT 305
+ L + G++ N+ G+ G RS VK IACG SA ++
Sbjct: 197 SNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLHPTQLKTLRSIRVKYIACGEDFSAFLS 256
Query: 306 DAGALLTFGWGLYGQ 320
G + T G G+YGQ
Sbjct: 257 ADGGVFTCGAGMYGQ 271
Score = 47.4 bits (111), Expect = 0.009, Method: Composition-based stats.
Identities = 73/283 (25%), Positives = 115/283 (40%), Gaps = 52/283 (18%)
Query: 43 PARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPF 98
P ++ G D + K CGG LA +E G+L WGS D GQ G +G T P P
Sbjct: 75 PEKVEGLDFYRITKISCGGN--HTLAFNEWGQLFGWGS-DSHGQL----GFNGTTQPLPK 127
Query: 99 PLPTEAS--VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ + A+ +V+ + G H +++T GE+Y+WG + G ++K T
Sbjct: 128 IIKSLATFHIVQISCGKNHSLALTNNGELYSWG-----GNYDGQLGLGMRSEYEKQPTLI 182
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPG 211
+S L P + G S A + DE L P +
Sbjct: 183 KSLLGI---PIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLHPTQLKTLRS 239
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+++ +A G + LS G V+ G G GQLG GS + ++P R
Sbjct: 240 IRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGS-----TSNEILP----------R 284
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTF 313
++ GS V +++CG RH+ A+V G + +F
Sbjct: 285 KIMELMGST----------VTQVSCGKRHTLALVPSRGRVYSF 317
>gi|328783019|ref|XP_395630.4| PREDICTED: hypothetical protein LOC412167, partial [Apis mellifera]
Length = 854
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 95/263 (36%), Gaps = 81/263 (30%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G +LA + G + WGS + EGQ L G +P + V + G+ H +
Sbjct: 215 AGSHHSLALTSDGNVFAWGS-NLEGQLGLPDIS-GLVNKPTKVHIPEPVKRINTGYYHSI 272
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
+TE G VY G E S K+ D +F KQ LP
Sbjct: 273 FLTENGLVYVCGESE---SGKLGIDI----NFSTQIMPKQMQLP---------------- 309
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
NP + VA GG HT+ L++ ++ G
Sbjct: 310 -------------------------------NP---VIYVACGGHHTMFLTENNNLYCTG 335
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
GQLGLG+ + + TP L+ S G + I+CG
Sbjct: 336 SNSSGQLGLGTNVTELHTPKLL----------------------SQGALKNERISRISCG 373
Query: 298 GRHSAVVTDAGALLTFGWGLYGQ 320
H+A++T++G L T G G +G+
Sbjct: 374 ESHTAILTESGKLYTCGDGRHGK 396
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 56/135 (41%), Gaps = 25/135 (18%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP---HLIPCLEHAAS 267
G KI ++ AG H+L L+ G V+ WG EGQLGL +V P H+ ++ +
Sbjct: 207 GSKIVQIVAGSHHSLALTSDGNVFAWGSNLEGQLGLPDISGLVNKPTKVHIPEPVKRINT 266
Query: 268 GKDRPLLVRQGSV------NSSGKAGRSY----------------VKEIACGGRHSAVVT 305
G + + + + + SGK G V +ACGG H+ +T
Sbjct: 267 GYYHSIFLTENGLVYVCGESESGKLGIDINFSTQIMPKQMQLPNPVIYVACGGHHTMFLT 326
Query: 306 DAGALLTFGWGLYGQ 320
+ L G GQ
Sbjct: 327 ENNNLYCTGSNSSGQ 341
>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
carolinensis]
Length = 1109
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 133/371 (35%), Gaps = 83/371 (22%)
Query: 5 GSKREENEKMEECKETVVYMWGY----LPGTSPEKSPI-LSPIPARLCGGDSWKDV-CGG 58
G KR+EN+ + K + WGY PGTS PI L P + S K+V CGG
Sbjct: 43 GGKRQENKLDDFLKGKKMLCWGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGG 102
Query: 59 G-------------CGF-----------------------------------ALATSESG 70
CG +LA S+ G
Sbjct: 103 NHSIFLLEDGEVYTCGVNTKGQLGHEKEGSKPEQIGALADQHIIHVACGESHSLALSDQG 162
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+L +WG+ D T+ P + +++ + G HC+++ G+ + WG
Sbjct: 163 RLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCLALAADGQFFAWG- 221
Query: 131 RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE 190
+ + ++F S S Q+ +P Q + + + S
Sbjct: 222 QNSHGQLGLGKEFPSQASPQR--VKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTSG 279
Query: 191 NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
DE SPC V L K+ ++ G HT +L+ G V+ +G G GQLG S
Sbjct: 280 QLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQLGHDSFN 339
Query: 251 KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGA 309
V R +L G S V +IACG +H+ A V +G
Sbjct: 340 DEV---------------NPRRVLELMG----------SEVSQIACGRQHTLAFVPSSGL 374
Query: 310 LLTFGWGLYGQ 320
+ FG G+ GQ
Sbjct: 375 IYAFGCGIKGQ 385
>gi|426380328|ref|XP_004056825.1| PREDICTED: RCC1 domain-containing protein 1 isoform 1 [Gorilla
gorilla gorilla]
gi|426380330|ref|XP_004056826.1| PREDICTED: RCC1 domain-containing protein 1 isoform 2 [Gorilla
gorilla gorilla]
Length = 376
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G AL +G++ +WG GQ L G EP L +V A AAG H
Sbjct: 166 GAEHALLLDAAGQVFSWGGGR-HGQ--LGHGTLEAELEPRLLEALQGLVMAEVAAGGWHS 222
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V V+E G++Y WGW E A TR+ G + +++T E+
Sbjct: 223 VCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREAT----------------ELNED 266
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ ++T A + + P + F P L+ L G K + G RHT +++ G+++
Sbjct: 267 GSQVKRTGGAEDGAPAPFIAVQPF---PALLDLPMGSDAVKASCGSRHTAVVTRTGELYT 323
Query: 236 WGYGGEGQLG 245
WG+G GQLG
Sbjct: 324 WGWGKYGQLG 333
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 63/136 (46%), Gaps = 19/136 (13%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L +R + +
Sbjct: 199 LEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETV- 256
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKA----------------GRSYVKEIACGGRHSAVV 304
E +D + R G A G VK +CG RH+AVV
Sbjct: 257 AREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVK-ASCGSRHTAVV 315
Query: 305 TDAGALLTFGWGLYGQ 320
T G L T+GWG YGQ
Sbjct: 316 TRTGELYTWGWGKYGQ 331
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 100/260 (38%), Gaps = 42/260 (16%)
Query: 86 LTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS 145
L SG+ + P PL + + +A W++ VT G + G + + + S
Sbjct: 21 LGSGRGRQVHSPSPLRAGVDICRVSASWSYTAFVTRGGRLELSG-SASGAAVRCKDAWAS 79
Query: 146 AGSFQKDSTGK-QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN------------P 192
G G + AL AP S R GE + + A E + P
Sbjct: 80 EGLLAVLRAGPGREALLQVWAPESALR-GEPLWAQNVVPEAEGEDDPVGEAQAGSLPLLP 138
Query: 193 ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+ +P L P ++ ++ G H L+L GQV+ WG G GQLG G+ ++
Sbjct: 139 CARAYVSPRAPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT-LEA 197
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
P L+ L QG V + E+A GG HS V++ G +
Sbjct: 198 ELEPRLLEAL--------------QGLV----------MAEVAAGGWHSVCVSETGDIYI 233
Query: 313 FGWGLYGQRM--AKCLAGDG 330
+GW GQ + LA DG
Sbjct: 234 WGWNESGQLALPTRNLAEDG 253
>gi|355778311|gb|EHH63347.1| RCC1 domain-containing protein 1 [Macaca fascicularis]
Length = 262
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L +R + +
Sbjct: 85 LEPRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETV- 142
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKA----------------GRSYVKEIACGGRHSAVV 304
E +D + R G V A G VK ++CG RH+AVV
Sbjct: 143 AREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVK-VSCGSRHTAVV 201
Query: 305 TDAGALLTFGWGLYGQ 320
T G L T+GWG YGQ
Sbjct: 202 TRTGELYTWGWGKYGQ 217
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 85/193 (44%), Gaps = 41/193 (21%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVKAAAGW 113
L +G++ +WG G+HG+ E P EA ++ + AAG
Sbjct: 57 LLLDAAGQVFSWGG-----------GRHGQLGHGTLEAELEPRLLEALQGLTMAEVAAGG 105
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRA 172
H V V+E G++Y WGW E A TR+ G + +++TG
Sbjct: 106 WHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLN--------------- 150
Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
E+ + ++T + + P + F P L+ L G KV+ G RHT +++ G+
Sbjct: 151 -EDGSQVKRTGRVEDGAPAPFIAVQPF---PALLDLPLGSDAVKVSCGSRHTAVVTRTGE 206
Query: 233 VWGWGYGGEGQLG 245
++ WG+G GQLG
Sbjct: 207 LYTWGWGKYGQLG 219
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 56/130 (43%), Gaps = 32/130 (24%)
Query: 208 LNPGVKITKVAAGGRHT-----LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
L GV + +V+A +T L+L GQV+ WG G GQLG G+ ++ P L+ L
Sbjct: 35 LRAGVDVCRVSASWSYTAFVTRLLLDAAGQVFSWGGGRHGQLGHGT-LEAELEPRLLEAL 93
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQRM 322
+ + E+A GG HS V++ G + +GW GQ
Sbjct: 94 QGLT------------------------MAEVAAGGWHSVCVSETGDIYIWGWNESGQLA 129
Query: 323 --AKCLAGDG 330
+ LA DG
Sbjct: 130 LPTRNLAEDG 139
>gi|320033050|gb|EFW14999.1| ran exchange factor Prp20/Pim1 [Coccidioides posadasii str.
Silveira]
Length = 580
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 87/229 (37%), Gaps = 59/229 (25%)
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST- 154
P L + VV+ A G HCV++T ++YTWG + G+ +D+T
Sbjct: 170 NPLLLADKIGVVQIATGGMHCVALTHDNKIYTWGVND-------------QGALGRDTTW 216
Query: 155 -GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK 213
GK + + + + + +E + P D F G
Sbjct: 217 EGKLKDIDDAGSDSDSDDGSDSGM------NPKEATPTPIPADYF----------PEGTI 260
Query: 214 ITKVAAGGRHTLILSDMGQVWGWG--YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+VAAG + L+D G V+GWG G EG LG + ++ TP LIP L+
Sbjct: 261 FVEVAAGDSSSFALTDDGFVYGWGTFRGNEGILGFDATTRVQTTPKLIPSLKK------- 313
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+K IACG H+ + GA+ +G G Q
Sbjct: 314 -------------------IKHIACGDNHALALDTKGAVFAWGSGQQNQ 343
>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
Length = 1010
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 99/262 (37%), Gaps = 85/262 (32%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
+LA G++ WG A EGQ + K TP+ T +++ + G H ++++E
Sbjct: 85 SLAVCHKGRVFAWG-AGSEGQLGIEECKEKIFTPKKIKTLTGIKIIQVSCGHYHSLALSE 143
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---QAPPSDKRAGEEVVK 178
G+VY+WG K+S G Q L E QA P R+ E
Sbjct: 144 DGQVYSWG---------------------KNSQG-QLGLGKEFPSQASPQRVRSLE---- 177
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
G+ + +VAAGG H+ LS G +GWG
Sbjct: 178 --------------------------------GIPLAQVAAGGAHSFALSLSGTSFGWGS 205
Query: 239 GGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
GQL L SG + P V++ +S G V I+CG
Sbjct: 206 NNTGQLAL--------------------SGNNTP--VQRYKPHSIGALKSLDVIYISCGY 243
Query: 299 RHSAVVTDAGALLTFGWGLYGQ 320
H+AV+T G + TFG GQ
Sbjct: 244 EHTAVLTQNGKVFTFGDNSCGQ 265
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 31/129 (24%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR 271
V+ G H+L + G+V+ WG G EGQLG+ + + TP I L + G
Sbjct: 78 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTLTGIKIIQVSCGHYH 137
Query: 272 PL-LVRQGSV-----NSSGKAG--------------RSY----VKEIACGGRHSAVVTDA 307
L L G V NS G+ G RS + ++A GG HS ++ +
Sbjct: 138 SLALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS 197
Query: 308 GALLTFGWG 316
G +FGWG
Sbjct: 198 GT--SFGWG 204
>gi|351711665|gb|EHB14584.1| Putative E3 ubiquitin-protein ligase HERC3 [Heterocephalus glaber]
Length = 1051
Score = 60.8 bits (146), Expect = 9e-07, Method: Composition-based stats.
Identities = 78/307 (25%), Positives = 122/307 (39%), Gaps = 60/307 (19%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDQGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
FT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 159 FTWGKNSHGQLGLGKEFSSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Query: 241 EGQLGLGSRIKMVPTPHL--IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
GQLGL K + L + S ++ P V+ V I+CG
Sbjct: 219 AGQLGLSDE-KGIKQGALDKTENIRGLYSNRESPCHVKLLRTQK--------VVYISCGD 269
Query: 299 RHSAVVT 305
H+AV+T
Sbjct: 270 EHTAVLT 276
Score = 58.5 bits (140), Expect = 5e-06, Method: Composition-based stats.
Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 31/133 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP------------- 260
I VA G H+L LSD GQ++ WG G +GQLGL + V P LI
Sbjct: 86 IIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCG 145
Query: 261 ---CLEHAASGK---------DRPLLVRQGSVNSSGKAGRSY----VKEIACGGRHSAVV 304
CL AA G+ + L ++ S +S + RS + ++A GG HS +
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFSSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205
Query: 305 TDAGALLTFGWGL 317
+ +GA+ FGWG+
Sbjct: 206 SLSGAV--FGWGM 216
Score = 42.4 bits (98), Expect = 0.36, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 27/107 (25%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
+ +VA GG H++ L + G+V+ G +GQLG H G ++P
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG------------------HEREG-NKPE 76
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ G ++ +ACG HS ++D G L ++G G GQ
Sbjct: 77 QI--------GALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQ 115
>gi|119629205|gb|EAX08800.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Homo sapiens]
Length = 310
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 92/231 (39%), Gaps = 34/231 (14%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL + K C G G LAT+E G++ TWG S L +G P
Sbjct: 89 PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCH 144
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG+ ++G ST
Sbjct: 145 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTVN 191
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLV 206
Q +K + + + E G+ +PC V
Sbjct: 192 QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRV 251
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 198
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 258
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 259 VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 288
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 176 WGYNNSGQ 183
>gi|63054858|ref|NP_291022.2| RCC1 domain-containing protein 1 [Homo sapiens]
gi|63054860|ref|NP_001017919.1| RCC1 domain-containing protein 1 [Homo sapiens]
gi|190360155|sp|A6NED2.1|RCCD1_HUMAN RecName: Full=RCC1 domain-containing protein 1
gi|119622535|gb|EAX02130.1| RCC1 domain containing 1, isoform CRA_a [Homo sapiens]
gi|119622537|gb|EAX02132.1| RCC1 domain containing 1, isoform CRA_a [Homo sapiens]
gi|187954499|gb|AAI40709.1| RCC1 domain containing 1 [Homo sapiens]
gi|187954599|gb|AAI40710.1| RCC1 domain containing 1 [Homo sapiens]
Length = 376
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G AL +G++ +WG GQ L G EP L +V A AAG H
Sbjct: 166 GAEHALLLDAAGQVFSWGGGR-HGQ--LGHGTLEAELEPRLLEALQGLVMAEVAAGGWHS 222
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V V+E G++Y WGW E A TR+ G + +++T E+
Sbjct: 223 VCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREAT----------------ELNED 266
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ ++T A + + P + F P L+ L G K + G RHT +++ G+++
Sbjct: 267 GSQVKRTGGAEDGAPAPFIAVQPF---PALLDLPMGSDAVKASCGSRHTAVVTRTGELYT 323
Query: 236 WGYGGEGQLG 245
WG+G GQLG
Sbjct: 324 WGWGKYGQLG 333
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 63/136 (46%), Gaps = 19/136 (13%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L +R + +
Sbjct: 199 LEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETV- 256
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKA----------------GRSYVKEIACGGRHSAVV 304
E +D + R G A G VK +CG RH+AVV
Sbjct: 257 AREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVK-ASCGSRHTAVV 315
Query: 305 TDAGALLTFGWGLYGQ 320
T G L T+GWG YGQ
Sbjct: 316 TRTGELYTWGWGKYGQ 331
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 27/131 (20%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P L P ++ ++ G H L+L GQV+ WG G GQLG G+ ++ P L+
Sbjct: 148 APFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT-LEAELEPRLLEA 206
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQR 321
L QG V + E+A GG HS V++ G + +GW GQ
Sbjct: 207 L--------------QGLV----------MAEVAAGGWHSVCVSETGDIYIWGWNESGQL 242
Query: 322 M--AKCLAGDG 330
+ LA DG
Sbjct: 243 ALPTRNLAEDG 253
>gi|410300174|gb|JAA28687.1| RCC1 domain containing 1 [Pan troglodytes]
Length = 378
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G AL +G++ +WG GQ L G EP L +V A AAG H
Sbjct: 168 GAEHALLLDAAGQVFSWGGGR-HGQ--LGHGTLEAELEPRLLEALQGLVMAEVAAGGWHS 224
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V V+E G++Y WGW E A TR+ G + +++T E+
Sbjct: 225 VCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREAT----------------ELNED 268
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ ++T A + + P + F P L+ L G K + G RHT +++ G+++
Sbjct: 269 GSQVKRTGGAEDGAPAPFIAVQPF---PALLDLPMGSDAVKASCGSRHTAVVTRTGELYT 325
Query: 236 WGYGGEGQLG 245
WG+G GQLG
Sbjct: 326 WGWGKYGQLG 335
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 63/136 (46%), Gaps = 19/136 (13%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L +R + +
Sbjct: 201 LEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETV- 258
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKA----------------GRSYVKEIACGGRHSAVV 304
E +D + R G A G VK +CG RH+AVV
Sbjct: 259 AREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVK-ASCGSRHTAVV 317
Query: 305 TDAGALLTFGWGLYGQ 320
T G L T+GWG YGQ
Sbjct: 318 TRTGELYTWGWGKYGQ 333
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 27/131 (20%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P L P ++ ++ G H L+L GQV+ WG G GQLG G+ ++ P L+
Sbjct: 150 APFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT-LEAELEPRLLEA 208
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQR 321
L QG V + E+A GG HS V++ G + +GW GQ
Sbjct: 209 L--------------QGLV----------MAEVAAGGWHSVCVSETGDIYIWGWNESGQL 244
Query: 322 M--AKCLAGDG 330
+ LA DG
Sbjct: 245 ALPTRNLAEDG 255
>gi|307106099|gb|EFN54346.1| hypothetical protein CHLNCDRAFT_24715 [Chlorella variabilis]
Length = 393
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 132/328 (40%), Gaps = 55/328 (16%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
G S E + P R G K V GG A A +SG + TWG +D+GQ
Sbjct: 17 GHSLEYASEELPRVVRALLGVPLKAVACGGAHTA-AVDDSGTVYTWG-LNDKGQL----- 69
Query: 90 KHGETPEPFPLPTEAS----VVKAAAGWAHCVSVTEAGEVYTWGWRE-----CVPSAKVT 140
H LP E + VV +AG+ H + V E+G V+++G +
Sbjct: 70 GHDSEDSEVGLPGEVAMPERVVALSAGYYHTLCVGESGSVWSFGCNGKGQLGLGKDVVLV 129
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR--EESENP----AS 194
R+ S Q + K A+ AG EV ++ R S P S
Sbjct: 130 REPRLVKSLQDN---KVVAVAAGMEHSLALTAGGEVYSWGNAANGRLGHGSATPRRLFGS 186
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
EF P LV +++ +V+AG H+ +S G + WGYG QLG GS +
Sbjct: 187 SIEFL---PRLVRAFEALRVEQVSAGQMHSAAVSTAGDAFLWGYGKFHQLGFGSDEDLA- 242
Query: 255 TPHLIPCLE----HAASGKDRPLLVRQG------SVNSSGKAGRSYVK------------ 292
P ++P L+ A G L ++ G N +G G+ + K
Sbjct: 243 GPTVLPPLKGSTAAVACGSLHSLALQYGGHVLAWGTNQNGVLGQGHEKQQQPKRPSKVPG 302
Query: 293 ----EIACGGRHSAVVTDAGALLTFGWG 316
+IA G +HSA VT +G L T+GWG
Sbjct: 303 VSAEQIAAGWKHSAAVTGSGKLYTWGWG 330
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 90/222 (40%), Gaps = 43/222 (19%)
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G AH +V ++G VYTWG + G DS + LP E A P
Sbjct: 43 ACGGAHTAAVDDSGTVYTWGLND-------------KGQLGHDSEDSEVGLPGEVAMP-- 87
Query: 170 KRAGEEVVKRRKTSSAREESENPASG-----------DEFFTLSPCLVTLNPGVKITKVA 218
+R T E + G D P LV K+ VA
Sbjct: 88 ERVVALSAGYYHTLCVGESGSVWSFGCNGKGQLGLGKDVVLVREPRLVKSLQDNKVVAVA 147
Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
AG H+L L+ G+V+ WG G+LG GS TP + +S + P LVR
Sbjct: 148 AGMEHSLALTAGGEVYSWGNAANGRLGHGS-----ATPRRL----FGSSIEFLPRLVR-- 196
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +A R V++++ G HSA V+ AG +G+G + Q
Sbjct: 197 ----AFEALR--VEQVSAGQMHSAAVSTAGDAFLWGYGKFHQ 232
>gi|426395579|ref|XP_004064048.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Gorilla gorilla gorilla]
Length = 803
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 26/119 (21%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P LV+ P K+ +VA GG HT++L++ V+ +G G GQLGLG+ + P +I
Sbjct: 40 TPQLVSEIPE-KVIQVACGGEHTVVLTE-NAVYTFGLGQFGQLGLGTFLFETSEPKVIEN 97
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+R ++ SY I+CG H+A++TD G + TFG G +G+
Sbjct: 98 -------------IRDQTI--------SY---ISCGENHTALITDIGLMYTFGDGRHGK 132
>gi|315645418|ref|ZP_07898542.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
gi|315278896|gb|EFU42206.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
Length = 667
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 115/288 (39%), Gaps = 45/288 (15%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT+ +K+ +P + G K + GG ++A +E+G + TWG +D G+ L +G
Sbjct: 119 GTTADKN-----VPTPVSGLSGIKAISGGLGYHSMALTENGTVWTWGK-NDNGE--LGNG 170
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
+ P + + V AAG + +++ G ++ WG A + G
Sbjct: 171 TTVQQNSPVLVIGLSDVTAIAAGGYYSLALKSDGTIWAWG-------ANGNGELGDGTIV 223
Query: 150 QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLN 209
K + + S L A + + +K+ T A + GD T V +
Sbjct: 224 DKHTPVQVSGLSDVIAITAGG-SHSLAIKQDGTVWAWGINMYGTLGDGTRTNRTIPVKVR 282
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
I +A GG H+L L G VWGWG GQLGLG TP + +EH
Sbjct: 283 NLQHIKAIAGGGHHSLALDQEGNVWGWGDNSRGQLGLGHNSSRT-TPEQLTGIEH----- 336
Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
V +IA GG HSA + G + +GWGL
Sbjct: 337 ---------------------VLDIAGGGFHSAALKKDGRV--WGWGL 361
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 89/228 (39%), Gaps = 36/228 (15%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
T + SP+L + G + GG ++LA G + WG+ G L G
Sbjct: 172 TVQQNSPVL------VIGLSDVTAIAAGGY-YSLALKSDGTIWAWGA---NGNGELGDGT 221
Query: 91 HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
+ P + + V+ AG +H +++ + G V+ WG +G+ G
Sbjct: 222 IVDKHTPVQVSGLSDVIAITAGGSHSLAIKQDGTVWAWG----------INMYGTLG--- 268
Query: 151 KDSTGKQSALPTEQAPPSDKRA----GEEVVKRRKTSSAREESENPAS----GDEFFTLS 202
D T +P + +A G + + + +N G +
Sbjct: 269 -DGTRTNRTIPVKVRNLQHIKAIAGGGHHSLALDQEGNVWGWGDNSRGQLGLGHNSSRTT 327
Query: 203 PCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
P +T G++ + +A GG H+ L G+VWGWG GQ+G G+R
Sbjct: 328 PEQLT---GIEHVLDIAGGGFHSAALKKDGRVWGWGLNSSGQIGDGTR 372
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 93/250 (37%), Gaps = 60/250 (24%)
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
K AG+ H S+ +G+VY WG Q D A + P
Sbjct: 38 KLVAGYYHTASLVSSGDVYVWG--------------------QGDRGQIGDAAWNARNTP 77
Query: 168 SDKRAGEEVVK----RRKTSSAREE--------SENPASGDEFFTLSPCLVTLNPGVKIT 215
R +V+ R T + R + +EN G T + T G+
Sbjct: 78 VQARGLNDVMDIHTGVRSTMALRSDGTVWTWGSNENGQLG-IGTTADKNVPTPVSGLSGI 136
Query: 216 KVAAGG--RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH----AASGK 269
K +GG H++ L++ G VW WG G+LG G+ ++ +P L+ L AA G
Sbjct: 137 KAISGGLGYHSMALTENGTVWTWGKNDNGELGNGTTVQQ-NSPVLVIGLSDVTAIAAGGY 195
Query: 270 DRPLLVRQGSV-----NSSGK---------------AGRSYVKEIACGGRHSAVVTDAGA 309
L G++ N +G+ +G S V I GG HS + G
Sbjct: 196 YSLALKSDGTIWAWGANGNGELGDGTIVDKHTPVQVSGLSDVIAITAGGSHSLAIKQDGT 255
Query: 310 LLTFGWGLYG 319
+ +G +YG
Sbjct: 256 VWAWGINMYG 265
>gi|386780927|ref|NP_001247543.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
gi|402902026|ref|XP_003913930.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Papio anubis]
gi|355754700|gb|EHH58601.1| Regulator of chromosome condensation and BTB domain-containing
protein 1 [Macaca fascicularis]
gi|383419643|gb|AFH33035.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
gi|383419645|gb|AFH33036.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
Length = 531
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 118/323 (36%), Gaps = 93/323 (28%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCG--GDSWKDVCGGGC 60
G+ E + + E V+ Y GT +S + +P +L G G K + G
Sbjct: 28 GTSASEALYVTDDDEVFVFGLNYSNCLGTGDNQSTL---VPKKLEGLSGKKIKSLSYGSG 84
Query: 61 GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCV 117
L ++E G + WG G S L +G + P + T VV+ A G H +
Sbjct: 85 PHVLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSM 141
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++ GEV+ WG+ C G GS ST Q P K +
Sbjct: 142 ALAADGEVFAWGYNNC----------GQVGS---GSTANQ--------PTPRKVTNCLHI 180
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
KR + +A G ++ + D G+V+GWG
Sbjct: 181 KR----------------------------------VVGIACGQTSSMAVLDNGEVYGWG 206
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
Y G GQLGLG+ + TP VR +++S V +I CG
Sbjct: 207 YNGNGQLGLGNNGNQL-TP------------------VRVAALHSVC------VNQIVCG 241
Query: 298 GRHSAVVTDAGALLTFGWGLYGQ 320
H+ +TD G L +G YGQ
Sbjct: 242 YAHTLALTDEGLLYAWGANTYGQ 264
>gi|40018552|ref|NP_954515.1| RCC1 and BTB domain-containing protein 2 [Rattus norvegicus]
gi|81885332|sp|Q6P798.1|RCBT2_RAT RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|38197422|gb|AAH61766.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Rattus norvegicus]
gi|149049940|gb|EDM02264.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Rattus norvegicus]
Length = 551
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 39/221 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT++ G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHIVLATTD-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 207
Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ + S A ++ +SG++ +PC V G+++ +VA
Sbjct: 208 MSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ---PTPCRVAALQGIRVQRVAC 264
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
G HTL+L+D GQ++ WG GQLG G++ PTP ++
Sbjct: 265 GYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVV 305
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 259 VQRVACGYAHTLVLTDEGQIYAWGANSYGQ 288
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G++Y WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 176 WGYNNSGQ 183
>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
Length = 4996
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R+ DR
Sbjct: 4233 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSY-----------------DR 4275
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P LV + S V +IACG HSA +T +G +LT+G G YG+
Sbjct: 4276 PKLVEHLNGMS--------VADIACGSAHSAAITSSGHVLTWGKGRYGR 4316
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 27/110 (24%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R + D+
Sbjct: 3114 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL-----------------DK 3156
Query: 272 PLLVRQGSVNSSGKAGRS-YVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P LV +A R+ ++++ACG HSA ++ G L T+G G YG+
Sbjct: 3157 PRLV---------EALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3197
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
G F+LA + +G++ TWG D Y G +H P+P V+ A G
Sbjct: 3280 GAQFSLALTRAGEVWTWGKGD-----YYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGAL 3334
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+AG+VY WG
Sbjct: 3335 HCLAVTDAGQVYAWG 3349
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P+ ++ A G HCV+
Sbjct: 4399 GSQFSVALTKSGAVYTWGKGDFHRLGH-GSVDHVRRPKKVAALQGKKIISIATGSLHCVA 4457
Query: 119 VTEAGEVYTWG 129
++AGEVYTWG
Sbjct: 4458 CSDAGEVYTWG 4468
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 79/222 (35%), Gaps = 66/222 (29%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
L G + CG G L ++ + +WG D Y G+ G P E+
Sbjct: 4334 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKLPYKIESL 4388
Query: 105 ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
V+K G V++T++G VYTWG G F + G
Sbjct: 4389 AGLGVIKVECGSQFSVALTKSGAVYTWG----------------KGDFHRLGHG------ 4426
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
+ V+R K +A + G KI +A G
Sbjct: 4427 -----------SVDHVRRPKKVAALQ-----------------------GKKIISIATGS 4452
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
H + SD G+V+ WG EGQLG G+ + + P L+ L+
Sbjct: 4453 LHCVACSDAGEVYTWGDNDEGQLGDGT-VTAIQRPRLVAALQ 4493
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 113/308 (36%), Gaps = 62/308 (20%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAA---GW 113
GG S+ GK+ G + L G P P LP VVK A G
Sbjct: 3067 GGSKSLFIVSQDGKVFACGEGTN---GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGG 3123
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H +++T G+V++WG E G G + + K + +A K+
Sbjct: 3124 KHALALTLDGKVFSWGEGE----------DGKLGHGNRTTLDKPRLVEALRA----KKIR 3169
Query: 174 EEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGR- 222
+ +++ + E GD L P VT G ++ +VA G R
Sbjct: 3170 DVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKQVTALAGRRVIQVACGSRD 3229
Query: 223 -HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDRPL-LV 275
TL L++ G V+ WG G G+LG G + TPH I L G L L
Sbjct: 3230 AQTLALTEDGAVFSWGDGDFGKLGRGGS-EGSATPHEIERLSGIGVIQIECGAQFSLALT 3288
Query: 276 RQGSV--------NSSGKAGRSYVKE--------------IACGGRHSAVVTDAGALLTF 313
R G V G G +V++ +A G H VTDAG + +
Sbjct: 3289 RAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAW 3348
Query: 314 GWGLYGQR 321
G +GQ+
Sbjct: 3349 GDNDHGQQ 3356
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHC 116
G ++A + G L +WG A G + G P +V A G AHC
Sbjct: 777 AGAQSSMALTTEGHLYSWGKASCLGHQQVERSVQGCSVPRLVSSLQHKRLVDVAVGVAHC 836
Query: 117 VSVTEAGEVYTWG 129
+++T GEV+ WG
Sbjct: 837 LALTSCGEVFGWG 849
>gi|119179563|ref|XP_001241353.1| hypothetical protein CIMG_08516 [Coccidioides immitis RS]
gi|392866729|gb|EAS30097.2| ran exchange factor Prp20/Pim1 [Coccidioides immitis RS]
Length = 580
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 99/257 (38%), Gaps = 61/257 (23%)
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST- 154
P L VV+ A G HCV++T ++YTWG + G+ +D+T
Sbjct: 170 NPLLLADTIGVVQIATGGMHCVALTHDNKIYTWGVND-------------QGALGRDTTW 216
Query: 155 -GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK 213
GK + + + + + +E + P D F G
Sbjct: 217 EGKLKDIDDAGSDSDSDDGSDSGM------NPKEATPTPIPADYF----------PEGTI 260
Query: 214 ITKVAAGGRHTLILSDMGQVWGWG--YGGEGQLGLGSRIKMVPTPHLIPCL---EHAASG 268
+VAAG + L+D G V+GWG G EG LG + ++ TP LIP L +H A G
Sbjct: 261 FVEVAAGDSSSFALTDDGFVYGWGTFRGNEGILGFDATTRVQTTPKLIPSLKKIKHIACG 320
Query: 269 KDRPL-LVRQGSV-----NSSGKAGRSYVKE-------------------IACGGRHSAV 303
+ L L +G+V + GR V+ I CG HS
Sbjct: 321 DNHALALDTKGAVFAWGSGQQNQLGRRIVERTKLNGLHPREFGLPKNITYIGCGSFHSFA 380
Query: 304 VTDAGALLTFGWGLYGQ 320
+ G + ++G YG+
Sbjct: 381 IHQTGKVYSWGLNTYGE 397
>gi|329928889|ref|ZP_08282703.1| regulator of chromosome condensation (RCC1) repeat protein
[Paenibacillus sp. HGF5]
gi|328937260|gb|EGG33685.1| regulator of chromosome condensation (RCC1) repeat protein
[Paenibacillus sp. HGF5]
Length = 719
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 110/281 (39%), Gaps = 54/281 (19%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT 102
PA++ G K + GG +A SE+G + TWG +D G+ L +G + P +
Sbjct: 126 PAQVPGLSGIKAISGGLAYHGMALSENGTVWTWGK-NDNGE--LGNGTTTQQNSPVLVAG 182
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
+ V AAG + +++ G V+ WG G G D T + +P
Sbjct: 183 LSDVTAIAAGGYYSLALKSDGTVWAWG----------VNGSGELG----DGTTTERHVPV 228
Query: 163 EQAPPSDKRA----GEEVVKRRKTSSAREESENPAS--GDEFFTLSPCLVTLNPGVKITK 216
+ A +D A G + R+ + N GD T V + I
Sbjct: 229 QVAGLTDVMAIAAGGSHSLAIRQDGTVWAWGNNTYGTLGDGTRTHRTRPVQVRNLQHIVA 288
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDRPLLV 275
VA GG H+L + G VW WG + QLGL S ++P P + +EH
Sbjct: 289 VAGGGYHSLAVDQAGNVWSWGDNSQQQLGLSSNASSLIPVP--VTGIEH----------- 335
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
V+EI+ GG HS + G + +GWG
Sbjct: 336 ---------------VREISAGGFHSVAMKKDGTV--WGWG 359
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 99/244 (40%), Gaps = 42/244 (17%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
T+ + SP+L + G + GG ++LA G + WG G L G
Sbjct: 171 TTQQNSPVL------VAGLSDVTAIAAGGY-YSLALKSDGTVWAWGV---NGSGELGDGT 220
Query: 91 HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
E P + V+ AAG +H +++ + G V+ WG +G+ G
Sbjct: 221 TTERHVPVQVAGLTDVMAIAAGGSHSLAIRQDGTVWAWG----------NNTYGTLGDGT 270
Query: 151 KDSTGKQSALPTEQAPPSDKRAGEEVVKRR---KTSSAREESENPAS-GD---EFFTLSP 203
+ T + P R + +V S A +++ N S GD + LS
Sbjct: 271 R----------THRTRPVQVRNLQHIVAVAGGGYHSLAVDQAGNVWSWGDNSQQQLGLSS 320
Query: 204 CLVTLNP----GVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
+L P G++ + +++AGG H++ + G VWGWGY GQLG G+ P L
Sbjct: 321 NASSLIPVPVTGIEHVREISAGGFHSVAMKKDGTVWGWGYNSGGQLGDGTYNNTRGIPTL 380
Query: 259 IPCL 262
+
Sbjct: 381 TKAV 384
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 98/259 (37%), Gaps = 62/259 (23%)
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
L A K AG+ H S+ +GEVY+WG+ D G G D T
Sbjct: 29 LAAAAVTPKLVAGYYHTASLVSSGEVYSWGYG----------DRGQLG----DGT----- 69
Query: 160 LPTEQAPPSDKRAGEEVVKR---RKTSSAREE--------SENPASGDEFFTL--SPCLV 206
T P K + R + + R++ +EN G T +P V
Sbjct: 70 WNTRTTPVMAKNLNHVIDIHSGVRSSMALRQDGTVWTWGANENGQLGIGTITNVNAPAQV 129
Query: 207 TLNPGVKITKVAAGG--RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
PG+ K +GG H + LS+ G VW WG G+LG G+ + +P L+ L
Sbjct: 130 ---PGLSGIKAISGGLAYHGMALSENGTVWTWGKNDNGELGNGTTTQQ-NSPVLVAGLSD 185
Query: 265 ----AASGKDRPLLVRQGSV-----NSSGK---------------AGRSYVKEIACGGRH 300
AA G L G+V N SG+ AG + V IA GG H
Sbjct: 186 VTAIAAGGYYSLALKSDGTVWAWGVNGSGELGDGTTTERHVPVQVAGLTDVMAIAAGGSH 245
Query: 301 SAVVTDAGALLTFGWGLYG 319
S + G + +G YG
Sbjct: 246 SLAIRQDGTVWAWGNNTYG 264
>gi|313236983|emb|CBY12230.1| unnamed protein product [Oikopleura dioica]
Length = 1048
Score = 60.8 bits (146), Expect = 1e-06, Method: Composition-based stats.
Identities = 64/258 (24%), Positives = 100/258 (38%), Gaps = 39/258 (15%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
F++A +ESG L WG + + G+ E P+ SVV+ A G HC+++TE
Sbjct: 92 FSIAIAESGLLFGWGRSLN-GELMCKQDSLHE-PKLLDKIMHWSVVQVACGAQHCIALTE 149
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGS----FQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
G + +WG + G S + +A P Q +G
Sbjct: 150 EGTILSWG-------SNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSP 202
Query: 178 KRRKTSSAREESENPASGD-EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ + G+ + F SP LV ++ VA G H++ + G V+ W
Sbjct: 203 SGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSW 262
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G+GG GQLG S A + + ++ G+ V +I C
Sbjct: 263 GHGGNGQLGHNSM---------------ANVTQPKKIMELMGTT----------VCQICC 297
Query: 297 GGRHSAVVTDAGALLTFG 314
G RH+ +TD LL FG
Sbjct: 298 GRRHTISLTDKRKLLGFG 315
>gi|114659014|ref|XP_523159.2| PREDICTED: RCC1 domain-containing protein 1 isoform 2 [Pan
troglodytes]
gi|332844685|ref|XP_003314905.1| PREDICTED: RCC1 domain-containing protein 1 isoform 1 [Pan
troglodytes]
gi|410207948|gb|JAA01193.1| RCC1 domain containing 1 [Pan troglodytes]
gi|410329461|gb|JAA33677.1| RCC1 domain containing 1 [Pan troglodytes]
Length = 380
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 85/189 (44%), Gaps = 23/189 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G AL +G++ +WG GQ L G EP L +V A AAG H
Sbjct: 170 GAEHALLLDAAGQVFSWGGGR-HGQ--LGHGTLEAELEPRLLEALQGLVMAEVAAGGWHS 226
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
V V+E G++Y WGW E A TR+ G ++ +++ E G +V
Sbjct: 227 VCVSETGDIYIWGWNESGQLALPTRNLAEDG----ETVAREATELNED--------GSQV 274
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
++T A + + P + F P L+ L G K + G RHT +++ G+++ W
Sbjct: 275 ---KRTGGAEDGAPAPFIAVQPF---PALLDLPMGSDAVKASCGSRHTAVVTRTGELYTW 328
Query: 237 GYGGEGQLG 245
G+G GQLG
Sbjct: 329 GWGKYGQLG 337
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 63/136 (46%), Gaps = 19/136 (13%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L +R + +
Sbjct: 203 LEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETV- 260
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKA----------------GRSYVKEIACGGRHSAVV 304
E +D + R G A G VK +CG RH+AVV
Sbjct: 261 AREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVK-ASCGSRHTAVV 319
Query: 305 TDAGALLTFGWGLYGQ 320
T G L T+GWG YGQ
Sbjct: 320 TRTGELYTWGWGKYGQ 335
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 27/131 (20%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P L P ++ ++ G H L+L GQV+ WG G GQLG G+ ++ P L+
Sbjct: 152 APFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT-LEAELEPRLLEA 210
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQR 321
L QG V + E+A GG HS V++ G + +GW GQ
Sbjct: 211 L--------------QGLV----------MAEVAAGGWHSVCVSETGDIYIWGWNESGQL 246
Query: 322 M--AKCLAGDG 330
+ LA DG
Sbjct: 247 ALPTRNLAEDG 257
>gi|297274438|ref|XP_001101212.2| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Macaca mulatta]
Length = 519
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 84/221 (38%), Gaps = 65/221 (29%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P ++ S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 141 VPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPIPRR 197
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ VV A G C++V + GEVY WG + G S+G
Sbjct: 198 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWG-------------YNGNGQLGLGSSGN 244
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
Q PT PC V G+++ +
Sbjct: 245 Q---PT----------------------------------------PCRVAALQGIRVQR 261
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 262 VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 140 LVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 198
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 259 VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 288
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC Q S N S K V E+ACG HS V+T G +
Sbjct: 136 -TNHGLVPC---------------QISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 176 WGYNNSGQ 183
>gi|326671858|ref|XP_685964.5| PREDICTED: hypothetical protein LOC557752 [Danio rerio]
Length = 1413
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 102/266 (38%), Gaps = 83/266 (31%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA 114
+ G + A ++ G+L WG + EGQ L GK P + V + G+
Sbjct: 145 MLAAGSNTSAALTQDGRLYMWGD-NSEGQIGL--GKESNALTPQEVSVGKRVFWVSCGYY 201
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H VT G +YT+G + D G G L TE K A
Sbjct: 202 HSAFVTVDGALYTFGEK----------DSGKLG------------LSTE------KLANH 233
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+V P VT P ++ +VA GG HT+ L++ +V+
Sbjct: 234 KV--------------------------PQQVTDIPD-RVVQVACGGGHTVALTE-NEVY 265
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
+G G GQLG G+ I P ++ EH G+ VK
Sbjct: 266 SFGLGQFGQLGHGTFIFESRLPRVV---EHFRKGR---------------------VKHA 301
Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQ 320
ACG H+A++TD G L TFG G +G+
Sbjct: 302 ACGENHTALITDNGLLYTFGDGRHGK 327
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 59/145 (40%), Gaps = 36/145 (24%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI-------PCLEH 264
VK+T A G HTL+ + G ++ G EGQLGLG + HL+ P
Sbjct: 90 VKLT--ACGRTHTLVFTSRGNLYACGGNNEGQLGLGD-CNDRTSFHLVEFFNKQGPIKML 146
Query: 265 AASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IACGGRHSAVV 304
AA L + G + NS G+ G ++CG HSA V
Sbjct: 147 AAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSVGKRVFWVSCGYYHSAFV 206
Query: 305 TDAGALLTFG------WGLYGQRMA 323
T GAL TFG GL +++A
Sbjct: 207 TVDGALYTFGEKDSGKLGLSTEKLA 231
>gi|55725019|emb|CAH89377.1| hypothetical protein [Pongo abelii]
Length = 451
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 92/231 (39%), Gaps = 34/231 (14%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL + K C G G LAT+E G++ TWG S L +G P
Sbjct: 94 PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 149
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG + ++G ST
Sbjct: 150 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTVN 196
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLV 206
Q +K + + + E G+ +PC V
Sbjct: 197 QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRV 256
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 257 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 307
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 145 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 203
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 204 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 263
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 264 VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 293
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 236
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 237 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 86 GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 140
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 141 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 180
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 181 WGYNNSGQ 188
>gi|403222935|dbj|BAM41066.1| chromosome condensation protein [Theileria orientalis strain
Shintoku]
Length = 2619
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 82/347 (23%), Positives = 115/347 (33%), Gaps = 122/347 (35%)
Query: 4 NGSKREENEKMEECKETVVYMWGYLP------GTSPEKSPILSPIP-------ARLCGGD 50
+ S+R ++ VY WG +P G S IP A++ GD
Sbjct: 997 SSSRRTKDGAKHTVSHLNVYSWGKVPFNCLGQGVDVSTSEYPKIIPFFSGRKIAQVACGD 1056
Query: 51 --------SWKDVCGGGCGFALATSESGKL------------ITWGSADDEGQSYLTSGK 90
S K G F SG+L G+ D + S+ T
Sbjct: 1057 YHSAVLVSSSKQHPNAGTVFTFGLGNSGRLGYHIDTNSDVLSQQIGTEDKDEPSWCT--- 1113
Query: 91 HGETPEPFPLPT--EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS 148
TP+P L ++V A G H + T G VY+WG G+ G
Sbjct: 1114 --HTPQPVGLSIGLRNAIVSIACGANHTLVTTVDGCVYSWG-------------MGAYGV 1158
Query: 149 FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTL 208
S + P + PSD
Sbjct: 1159 LGTGSVANRYN-PVKVVFPSDN-------------------------------------- 1179
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
+ I+K AG RH++ L G VW WGYGG G+LGLGS + TP+LI +
Sbjct: 1180 ---IFISKCCAGSRHSMALDKEGNVWSWGYGGNGRLGLGS-TRNYYTPNLIRIFD----- 1230
Query: 269 KDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFG 314
+Y V +I+CG HSA + G + T+G
Sbjct: 1231 --------------------TYEVFQISCGDSHSACLDRFGTVYTWG 1257
Score = 42.7 bits (99), Expect = 0.23, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 52/125 (41%), Gaps = 13/125 (10%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLIL-------SDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
P ++ G KI +VA G H+ +L + G V+ +G G G+LG + T
Sbjct: 1038 PKIIPFFSGRKIAQVACGDYHSAVLVSSSKQHPNAGTVFTFGLGNSGRLGY-----HIDT 1092
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAG-RSYVKEIACGGRHSAVVTDAGALLTFG 314
+ + KD P G R+ + IACG H+ V T G + ++G
Sbjct: 1093 NSDVLSQQIGTEDKDEPSWCTHTPQPVGLSIGLRNAIVSIACGANHTLVTTVDGCVYSWG 1152
Query: 315 WGLYG 319
G YG
Sbjct: 1153 MGAYG 1157
Score = 40.0 bits (92), Expect = 1.5, Method: Composition-based stats.
Identities = 82/327 (25%), Positives = 117/327 (35%), Gaps = 76/327 (23%)
Query: 22 VYMWGYLPGT--SPEKSPILS---PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWG 76
VY WG GT + K I S P+ K CG +LA + +G L TWG
Sbjct: 1443 VYTWGVNNGTGYNSTKDQIESYSEPMLFNHFSSKISKIACGSN--HSLAITVNGLLFTWG 1500
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
+D GQ L G P +P + + AG V +G C+ S
Sbjct: 1501 -CNDNGQ--LGQGDLRSRVIPDHVPYIENCINVFAG------VDNSG---------CICS 1542
Query: 137 AK----VTRDFGSAGSFQKDSTGK---QSALPTEQAPPSDKRAGEEVVK-----RRKTSS 184
+ + D+G+ F S GK AL + P + V K
Sbjct: 1543 SNHEDFMKDDYGTLWVFGSSSCGKLGLGEALTSTVMTPREITTVTGVYKLALGTMHSVVL 1602
Query: 185 AREESENPA---------SGD--EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
E S A +GD +F +P + VK V AG H+L +S ++
Sbjct: 1603 THEGSLYSAGAGTGGRLGTGDTSNYFVFTP----VKTEVKFVDVCAGSSHSLAISVDNEL 1658
Query: 234 WGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
+GWG EG+ + S K V P L+ + G + V
Sbjct: 1659 YGWG---EGKY-ICSDEKHVLEPTLMEVI--------------------PSPTGEAKVIS 1694
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQ 320
G HS V+T++G + FG YGQ
Sbjct: 1695 AVAAGNHSLVLTNSGYVAAFGNNTYGQ 1721
>gi|281347459|gb|EFB23043.1| hypothetical protein PANDA_001337 [Ailuropoda melanoleuca]
Length = 1199
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 27/113 (23%)
Query: 210 PGV--KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
PG+ K+ +VA GG HT++L++ V+ +G G GQLGLG+ + P P +I EH
Sbjct: 229 PGIPEKVVQVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETPVPKVI---EHIKD 284
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
K + I CG H+A++TD G + TFG G +G+
Sbjct: 285 LK---------------------ISSIFCGENHTALITDLGLMYTFGDGRHGK 316
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 57/138 (41%), Gaps = 29/138 (21%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL- 262
C+ L P K+ A G HTL+ ++ G+V+ G EGQLGLG + + HLI
Sbjct: 70 CVKALKPE-KVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDER-NSFHLISFFT 127
Query: 263 ------EHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IAC 296
+ +A L G + NS G+ G + I+C
Sbjct: 128 SQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLKNITNVCVPQQVTVGKPISWISC 187
Query: 297 GGRHSAVVTDAGALLTFG 314
G HSA VT G L TFG
Sbjct: 188 GYYHSAFVTTEGELYTFG 205
>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
Length = 1270
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 110/289 (38%), Gaps = 90/289 (31%)
Query: 33 PEKSPILSPIPARLCGGDSW---KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLT 87
P + ++ +P ++ W K++ CG L + GK+ + G+ D +
Sbjct: 328 PSLAKVMVMVPRKM----DWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDV 383
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
+ P+ + +A G AH +++T G+VY+WG
Sbjct: 384 ESLPNKRPQLLTALENYIITQACCGTAHSLALTNWGQVYSWG------------------ 425
Query: 148 SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVT 207
++ G+ G+E T + R+ + P L+
Sbjct: 426 ---SNAVGQ---------------LGQE------TDTTRQ-------------IIPRLIR 448
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
++ ++AAG H L L++ G+++ WG GQLGLG + V TP L+ L
Sbjct: 449 SIAAKQVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSL----- 503
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
AG + IACGG HS V+ +GA+ FGWG
Sbjct: 504 ------------------AGVP-IAFIACGGNHSFAVSKSGAI--FGWG 531
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 98/253 (38%), Gaps = 54/253 (21%)
Query: 22 VYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVC--GGGCGFALATSESGKLITWGSA 78
VY WG G +++ I RL + K V G LA + SG+L WGS
Sbjct: 421 VYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQVVQIAAGHYHCLALTNSGELYAWGS- 479
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEAS------VVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ GQ L G T E PT + A G H +V+++G ++ WG
Sbjct: 480 NAYGQLGL-----GMTNEKVSTPTLVQSLAGVPIAFIACGGNHSFAVSKSGAIFGWG--- 531
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP 192
FG G +S + L T ++ + R S + S
Sbjct: 532 -------KNTFGQLGLNDLNSRQFPTQLRTLRS-----------LGVRYVSCGDDFSVFL 573
Query: 193 ASGDEFFT-----------------LSPCLVTLNPGVKITKVAAGGRHTL-ILSDMGQVW 234
+G FT + P +V G KIT++A G RHTL + G+++
Sbjct: 574 TAGGGVFTCGAGTFGQLGHGSCNNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIY 633
Query: 235 GWGYGGEGQLGLG 247
G+G G GQLG+G
Sbjct: 634 GFGLSGVGQLGIG 646
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 39/166 (23%)
Query: 192 PASGDEFFTLSPCLVTLNPGV------KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
P G+ F +L+ +V + + +I + A G HTL+L++ G+++ G GQ
Sbjct: 321 PIQGEVFPSLAKVMVMVPRKMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQ-- 378
Query: 246 LGSRIKMVPT--PHLIPCLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGR---- 288
LG ++ +P P L+ LE+ A G L L G V N+ G+ G+
Sbjct: 379 LGHDVESLPNKRPQLLTALENYIITQACCGTAHSLALTNWGQVYSWGSNAVGQLGQETDT 438
Query: 289 --------------SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V +IA G H +T++G L +G YGQ
Sbjct: 439 TRQIIPRLIRSIAAKQVVQIAAGHYHCLALTNSGELYAWGSNAYGQ 484
>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
Length = 1054
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 24/107 (22%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
I ++A G +H++ L++ G+++ WG +GQLGLGS KM P L+ L
Sbjct: 139 IVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAVP------- 191
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +ACGG H+ V++ +GA+ +G +GQ
Sbjct: 192 -----------------IAFVACGGYHTIVISKSGAVFAWGRNTFGQ 221
Score = 57.8 bits (138), Expect = 7e-06, Method: Composition-based stats.
Identities = 86/336 (25%), Positives = 130/336 (38%), Gaps = 86/336 (25%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKH------GETPEPFPLPTEASVVKAA 110
CG + +A ++ G++ + G+ +D GQ G+ G P F KAA
Sbjct: 40 ACGDNYTIAVTKEGQVYSCGN-NDHGQLGQEKGRKRLQLISGIDPLAFR--------KAA 90
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G +H + V E G++++WG S + G T + P K
Sbjct: 91 CGSSHTLVVNEWGQLFSWG------------------SNVEGQLGLDRVSATIREPRMVK 132
Query: 171 RAGEEVVKR-----RKTSSAREESENPASG-----------DEFFTLSPCLVTLNPGVKI 214
G +++ + + + + E A G D L P LV V I
Sbjct: 133 TLGTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAVPI 192
Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGK 269
VA GG HT+++S G V+ WG GQLGL S I+ P + L +AA G+
Sbjct: 193 AFVACGGYHTIVISKSGAVFAWGRNTFGQLGL-SDIQNRNVPCQLRTLRNSRVCYAACGE 251
Query: 270 D-RPLLVRQGSVNSSGKAGR-----------------------SYVKEIACGGRHS-AVV 304
+ L G V + G AG S V +I+CG RH+ A+V
Sbjct: 252 EFSVFLTMDGGVFTCG-AGMYGQLGHGNKTSEILPRQIMELMGSTVTQISCGRRHTLALV 310
Query: 305 TDAGALLTFGWGLYGQ---RMAKCLAGDGINMGSWV 337
G + +G G GQ R+A+ + G WV
Sbjct: 311 PSRGRVYAWGLGGAGQLGNRIAQNSTTPQVVFGPWV 346
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 72/266 (27%), Positives = 113/266 (42%), Gaps = 43/266 (16%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWA 114
CG ++A + +G+L WGS D GQ L S E +P + + A+V A A G
Sbjct: 143 ACGLKHSIALTNNGELYAWGSNSD-GQLGLGSDTKMEL-KPKLVHSLAAVPIAFVACGGY 200
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA-- 172
H + ++++G V+ WG FG G S + +P + + R
Sbjct: 201 HTIVISKSGAVFAWG----------RNTFGQLGL----SDIQNRNVPCQLRTLRNSRVCY 246
Query: 173 ---GEE-----VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
GEE + + G++ + P + G +T+++ G RHT
Sbjct: 247 AACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTSEILPRQIMELMGSTVTQISCGRRHT 306
Query: 225 LIL-SDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLI--PCLEHAASGKDRPLLVRQGSV 280
L L G+V+ WG GG GQ LG+RI + TP ++ P + + S ++ S
Sbjct: 307 LALVPSRGRVYAWGLGGAGQ--LGNRIAQNSTTPQVVFGPWVSPSGSS-----MINHDS- 358
Query: 281 NSSGKAGRSYVKEIACGGRHS-AVVT 305
+ S K VK I GG H A+VT
Sbjct: 359 HDSPKPTDCVVKHIFSGGDHCFAIVT 384
Score = 38.5 bits (88), Expect = 4.0, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 59/147 (40%), Gaps = 28/147 (19%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTPHLI 259
+P V +I ++A G +T+ ++ GQV+ G GQLG R ++ +
Sbjct: 23 FTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGNNDHGQLGQEKGRKRLQLISGID 82
Query: 260 P-CLEHAASGKDRPLLVRQ-------GSVNSSGKAGRSYVK------------------E 293
P AA G L+V + GS N G+ G V +
Sbjct: 83 PLAFRKAACGSSHTLVVNEWGQLFSWGS-NVEGQLGLDRVSATIREPRMVKTLGTKIIVQ 141
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQ 320
IACG +HS +T+ G L +G GQ
Sbjct: 142 IACGLKHSIALTNNGELYAWGSNSDGQ 168
>gi|444725178|gb|ELW65756.1| putative E3 ubiquitin-protein ligase HERC4 [Tupaia chinensis]
Length = 870
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 63/137 (45%), Gaps = 28/137 (20%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG K +P L IP ++ A
Sbjct: 11 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVA 70
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 71 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 130
Query: 304 VTDAGALLTFGWGLYGQ 320
+T G + TFG G YGQ
Sbjct: 131 LTKEGGVFTFGAGGYGQ 147
>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
Length = 1062
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 71/256 (27%), Positives = 95/256 (37%), Gaps = 83/256 (32%)
Query: 69 SGK-LITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
SGK L WGS GQ L G E TP P + +V + A G H + +T G+
Sbjct: 3 SGKELYCWGSTS-HGQLGL-GGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGK 60
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
VY G + D+ G LPT KR + S
Sbjct: 61 VYACG----------SNDYSQLGH----------DLPT---------------KRPRMSP 85
Query: 185 AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
F L P L I ++ G RH+L LSD GQV WG GQL
Sbjct: 86 --------------FLLIPEL----QDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQL 127
Query: 245 GLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
G + ++V P ++ R L+ + V +IACG HS +
Sbjct: 128 GHATDKEIVQLPKVV-----------RQLVTKT-------------VVQIACGNNHSLAL 163
Query: 305 TDAGALLTFGWGLYGQ 320
T G L ++G +YGQ
Sbjct: 164 TSCGELYSWGSNIYGQ 179
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 65/166 (39%), Gaps = 31/166 (18%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC- 261
P +T G+ + +A GG H+ ++S G V+GWG GQLGL L
Sbjct: 194 PLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLR 253
Query: 262 ---LEHAASGKD-RPLLVRQGSVNSSGKAGR----------------------SYVKEIA 295
+ A G + L +G V + G S + ++A
Sbjct: 254 TLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVA 313
Query: 296 CGGRHS-AVVTDAGALLTFGWGLYGQ---RMAKCLAGDGINMGSWV 337
CG RH+ A+V G + FG G GQ R K L + +G WV
Sbjct: 314 CGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIGPWV 359
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 30/137 (21%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM--------VPTPHLIPCLEHA 265
+ ++A G H+L L+ G+++ WG GQLG+ S + + T IP A
Sbjct: 150 VVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIA 209
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAG------RSY-----------VKEIACGGRHSAV 303
G L+ + G+V N+ G+ G RSY V+ +ACG S
Sbjct: 210 CGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVF 269
Query: 304 VTDAGALLTFGWGLYGQ 320
+T+ G + T G G YGQ
Sbjct: 270 LTNEGGVFTCGAGAYGQ 286
Score = 43.5 bits (101), Expect = 0.13, Method: Composition-based stats.
Identities = 73/287 (25%), Positives = 106/287 (36%), Gaps = 76/287 (26%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVV 107
K V CG +LA + G+L +WGS + GQ + S H P +
Sbjct: 148 KTVVQIACGNNHSLALTSCGELYSWGS-NIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLA 206
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
A G H ++++G V+ WG C G G D T + + PT+
Sbjct: 207 AIACGGNHSFLISKSGAVFGWGRNNC----------GQLG--LNDETNR--SYPTQ---- 248
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEF----------FT----------------- 200
+K +T R A GDEF FT
Sbjct: 249 ---------LKTLRTLGVR----FVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNE 295
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLIL-SDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHL 258
+ P +V G IT+VA G RHTL L G+V+ +G G GQLG S + M+P +
Sbjct: 296 MLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVI 355
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P + + S + S+ +++I GG S V T
Sbjct: 356 GPWVSPSGS----------ALLQSNDSQVSLVIRQIFSGGDQSIVTT 392
Score = 42.0 bits (97), Expect = 0.41, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 18/109 (16%)
Query: 28 LPGTSPEKSPILSPIPA-------RLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
LP P SP L IP ++C G +LA S+ G++++WG D
Sbjct: 76 LPTKRPRMSPFLL-IPELQDYVIIQICCGSR----------HSLALSDWGQVLSWGDNDC 124
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ T + + P+ +VV+ A G H +++T GE+Y+WG
Sbjct: 125 GQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWG 173
>gi|358337819|dbj|GAA56144.1| regulator of chromosome condensation [Clonorchis sinensis]
Length = 843
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 102/250 (40%), Gaps = 39/250 (15%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
E+ + AG H V +T AG V T G C + R+ S Q P
Sbjct: 110 ESLTTQICAGGMHTVCLTGAGRVITCG---CNDEGALGRNVLSDSELQ----------PP 156
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENP-ASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
+ P D G+E S ++S+ P +E + P V L P VKI V+AG
Sbjct: 157 TKKPHID---GKE--------SGHQDSDVPDLLAEETY---PAYVPLPPSVKICMVSAGD 202
Query: 222 RHTLILSDMGQVWGWG--YGGEGQLGL--GSRIKMVPTPHLIPCLEHAASGKDRP----L 273
HT L GQVW WG G G +GL I +P L P + A + P
Sbjct: 203 SHTAALDSEGQVWLWGTFRGASGPIGLTEAGEISQIPK-RLFPLISSAPATDKAPGSEVK 261
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ--RMAKCLAGDGI 331
V +V+S + V +IA G H +TD G L T G G GQ R+A+ A G
Sbjct: 262 PVPSSAVSSLHMGMGARVVKIASGQDHLVCLTDEGRLYTMGCGEQGQLGRIAERFARTGG 321
Query: 332 NMGSWVWVTP 341
G ++P
Sbjct: 322 RHGMSALLSP 331
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 36/157 (22%)
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST 154
P PLP + +AG +H ++ G+V+ WG G++G
Sbjct: 184 PAYVPLPPSVKICMVSAGDSHTAALDSEGQVWLWGTFR-----------GASGPIGLTEA 232
Query: 155 GKQSALP------TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTL 208
G+ S +P AP +DK G EV P +L +
Sbjct: 233 GEISQIPKRLFPLISSAPATDKAPGSEV--------------KPVPSSAVSSLH-----M 273
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
G ++ K+A+G H + L+D G+++ G G +GQLG
Sbjct: 274 GMGARVVKIASGQDHLVCLTDEGRLYTMGCGEQGQLG 310
>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
Length = 5087
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R+ DR
Sbjct: 4311 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRVSY-----------------DR 4353
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P LV S V +IACG HSA +T +G +LT+G G YG+
Sbjct: 4354 PKLVEHLHGMS--------VADIACGSAHSAAITASGQVLTWGKGRYGR 4394
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R + D+
Sbjct: 3161 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL-----------------DK 3203
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P RQ + K ++++ACG HSA ++ G L T+G G YG+
Sbjct: 3204 P---RQVEALRAKK-----IRDVACGSSHSAAISSQGELYTWGLGEYGR 3244
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
G F+LA + +G++ TWG D Y G +H P+P V+ A G
Sbjct: 3327 GAQFSLALTRAGEVWTWGKGD-----YYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGAL 3381
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT++G+VY WG
Sbjct: 3382 HCLAVTDSGQVYAWG 3396
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 78/222 (35%), Gaps = 66/222 (29%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
L G + CG G L ++ + +WG D Y G+ G P E+
Sbjct: 4412 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKLPYKIESL 4466
Query: 105 ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
V+K G V++T++G VYTWG DF G D
Sbjct: 4467 AGLGVIKVECGSQFSVALTKSGAVYTWG----------KGDFHRLGHGSVDH-------- 4508
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
V+R K +A + G KI +A G
Sbjct: 4509 ---------------VRRPKKVAALQ-----------------------GKKIISIATGS 4530
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
H + SD G+V+ WG EGQLG G+ + + P L+ L+
Sbjct: 4531 LHCVACSDSGEVYTWGDNDEGQLGDGT-VTAIQRPRLVSALQ 4571
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHC 116
G +++A S G++ TWG A G + G P +V A G AHC
Sbjct: 794 AGSQYSVALSSEGQVYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDMAVGVAHC 853
Query: 117 VSVTEAGEVYTWGWREC 133
++++ +GEV+ WG +C
Sbjct: 854 LALSSSGEVFGWGRNDC 870
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 108/278 (38%), Gaps = 66/278 (23%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAH 115
ALA + GK+ +WG +D GK G T P EA + A G +H
Sbjct: 3173 ALALTLDGKVFSWGEGED--------GKLGHGNRTTLDKPRQVEALRAKKIRDVACGSSH 3224
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
+++ GE+YTWG E +G G + K P A + +R +
Sbjct: 3225 SAAISSQGELYTWGLGE----------YGRLGHGDNATQLK----PKLVAALAGRRVVQV 3270
Query: 176 VVKRR--KTSSAREESENPASGDEFF----------TLSPCLVTLNPGVKITKVAAGGRH 223
R +T + E+ + GD F + +P + G+ + ++ G +
Sbjct: 3271 ACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQF 3330
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
+L L+ G+VW WG G +LG G +H K +P+
Sbjct: 3331 SLALTRAGEVWTWGKGDYYRLGHGGD-------------QHVR--KPQPI---------G 3366
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQR 321
G GR + +A G H VTD+G + +G +GQ+
Sbjct: 3367 GLRGRRVI-HVAVGALHCLAVTDSGQVYAWGDNDHGQQ 3403
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 104/278 (37%), Gaps = 58/278 (20%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAA---G 112
GG S+ G++ G + L G P P LP VVK A G
Sbjct: 3113 AGGSKSLFIVSQEGRVFACGEGTN---GRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSG 3169
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H +++T G+V++WG E G G + + K P + K+
Sbjct: 3170 GKHALALTLDGKVFSWGEGE----------DGKLGHGNRTTLDK----PRQVEALRAKKI 3215
Query: 173 GEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
+ +++ + E GD L P LV G ++ +VA G R
Sbjct: 3216 RDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALAGRRVVQVACGSR 3275
Query: 223 --HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
TL L++ G V+ WG G G+LG G + G D P + + +
Sbjct: 3276 DAQTLALTEDGAVFSWGDGDFGKLGRG-----------------GSEGSDTPHEIER--L 3316
Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ G V +I CG + S +T AG + T+G G Y
Sbjct: 3317 SGIG------VIQIECGAQFSLALTRAGEVWTWGKGDY 3348
>gi|261405028|ref|YP_003241269.1| hypothetical protein GYMC10_1173 [Paenibacillus sp. Y412MC10]
gi|261281491|gb|ACX63462.1| Listeria/Bacterioides repeat protein [Paenibacillus sp. Y412MC10]
Length = 1280
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 110/281 (39%), Gaps = 54/281 (19%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT 102
PA++ G K + GG +A SE+G + TWG +D G+ L +G + P +
Sbjct: 126 PAQVPGLSGIKAISGGLAYHGMALSENGTVWTWGK-NDNGE--LGNGTTIQQNSPVLVAG 182
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
+ V AAG + +++ G V+ WG G G D T +P
Sbjct: 183 LSDVTAIAAGGYYSLALKSDGTVWAWG----------VNGSGELG----DGTTTDRHVPV 228
Query: 163 EQAPPSDKRA------GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
+ A +D A +K+ T A + GD T V + I
Sbjct: 229 QVAGLTDVMAIAAGGSHSLAIKQDGTVWAWGNNTYGTLGDGTRTHRTRPVQVRNLQHIVA 288
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDRPLLV 275
VA GG H+L + G VW WG + QLGL S ++P P +P +EH
Sbjct: 289 VAGGGYHSLAVDRAGNVWSWGDNSQQQLGLNSNASSLIPVP--VPGIEH----------- 335
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
V+EI+ GG HS + G + +GWG
Sbjct: 336 ---------------VREISAGGFHSVAMKKDGTV--WGWG 359
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 93/229 (40%), Gaps = 24/229 (10%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
T + SP+L + G + GG ++LA G + WG G L G
Sbjct: 171 TIQQNSPVL------VAGLSDVTAIAAGGY-YSLALKSDGTVWAWGV---NGSGELGDGT 220
Query: 91 HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
+ P + V+ AAG +H +++ + G V+ WG +G+ G
Sbjct: 221 TTDRHVPVQVAGLTDVMAIAAGGSHSLAIKQDGTVWAWG----------NNTYGTLGDGT 270
Query: 151 KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTL-N 209
+ + + Q + G + + + +N + + L+ +
Sbjct: 271 RTHRTRPVQVRNLQHIVAVAGGGYHSLAVDRAGNVWSWGDNSQQQLGLNSNASSLIPVPV 330
Query: 210 PGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--RIKMVPT 255
PG++ + +++AGG H++ + G VWGWGY GQ+G G+ + +PT
Sbjct: 331 PGIEHVREISAGGFHSVAMKKDGTVWGWGYNSGGQIGDGTYNNTRGIPT 379
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 96/251 (38%), Gaps = 62/251 (24%)
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
K AG+ H S+ +GEVY+WG +G G D T T P
Sbjct: 37 KIVAGYYHTASLVSSGEVYSWG-------------YGDRGQL-GDGTWN-----TRTTPV 77
Query: 168 SDKRAGEEVVKR---RKTSSAREE--------SENPASGDEFFTL--SPCLVTLNPGVKI 214
K + R + + R++ +EN G T +P V PG+
Sbjct: 78 MAKNLNHVIDIHSGVRSSMALRQDGTVWTWGANENGQLGIGTITNVNAPAQV---PGLSG 134
Query: 215 TKVAAGG--RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH----AASG 268
K +GG H + LS+ G VW WG G+LG G+ I+ +P L+ L AA G
Sbjct: 135 IKAISGGLAYHGMALSENGTVWTWGKNDNGELGNGTTIQQ-NSPVLVAGLSDVTAIAAGG 193
Query: 269 KDRPLLVRQGSV-----NSSGK---------------AGRSYVKEIACGGRHSAVVTDAG 308
L G+V N SG+ AG + V IA GG HS + G
Sbjct: 194 YYSLALKSDGTVWAWGVNGSGELGDGTTTDRHVPVQVAGLTDVMAIAAGGSHSLAIKQDG 253
Query: 309 ALLTFGWGLYG 319
+ +G YG
Sbjct: 254 TVWAWGNNTYG 264
>gi|380792689|gb|AFE68220.1| RCC1 and BTB domain-containing protein 1, partial [Macaca mulatta]
Length = 345
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 120/323 (37%), Gaps = 93/323 (28%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCG--GDSWKDVCGGGC 60
G+ E + + E V+ Y GT +S + +P +L G G K + G
Sbjct: 28 GTSASEALYVTDDDEVFVFGLNYSNCLGTGDNQSTL---VPKKLEGLSGKKIKSLSYGSG 84
Query: 61 GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCV 117
L ++E G + WG G S L +G + P + T VV+ A G H +
Sbjct: 85 PHVLLSTEDGVVYAWG---HNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSM 141
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++ GEV+ WG+ C G GS ST Q P+ ++ +
Sbjct: 142 ALAADGEVFAWGYNNC----------GQVGS---GSTANQ---------PTPRKVTNCLH 179
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
+R + +A G ++ + D G+V+GWG
Sbjct: 180 IKR---------------------------------VVGIACGQTSSMAVLDNGEVYGWG 206
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
Y G GQLGLG+ + TP VR +++S V +I CG
Sbjct: 207 YNGNGQLGLGNNGNQL-TP------------------VRVAALHS------VCVNQIVCG 241
Query: 298 GRHSAVVTDAGALLTFGWGLYGQ 320
H+ +TD G L +G YGQ
Sbjct: 242 YAHTLALTDEGLLYAWGANTYGQ 264
>gi|428179449|gb|EKX48320.1| hypothetical protein GUITHDRAFT_162457 [Guillardia theta CCMP2712]
Length = 580
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 99/270 (36%), Gaps = 83/270 (30%)
Query: 55 VCGGGCGF--ALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
VCG CG+ ++ G ++ WG + GQ TS P + + A
Sbjct: 124 VCGVACGYYHTAVVTDVGLVMCWGKGNSGQLGQGDWTSSL---LPRTVSTLYNEKIRQIA 180
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G AH ++++ GE+Y+WG AG+ + GK + A P
Sbjct: 181 CGMAHTLALSVNGEIYSWG----------------AGADGQLGVGKHQEETADVATPQKV 224
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
R EE E F C G RH + ++D
Sbjct: 225 RVDEE---------------------EKFEFIAC---------------GSRHCMAITDD 248
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
+++ WG G +G+LGLG + + P +VR+ N
Sbjct: 249 CRLFSWGLGADGRLGLGD-----------------SESRFSPTVVRRSIENLR------- 284
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +A GG H+AV++D G + T G G YGQ
Sbjct: 285 ICYVAAGGHHTAVLSDNGEIFTCGRGSYGQ 314
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 27/105 (25%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-EHAASGKDRPLLV 275
VA GG HT+ +++ G+V WG+G EGQLG G+ P ++ L H G
Sbjct: 75 VACGGHHTVAVTEDGEVVSWGWGNEGQLGSGNAFDQT-VPAVVKALSNHRVCG------- 126
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ACG H+AVVTD G ++ +G G GQ
Sbjct: 127 ------------------VACGYYHTAVVTDVGLVMCWGKGNSGQ 153
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 56/127 (44%), Gaps = 25/127 (19%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
SG+ F P +V ++ VA G HT +++D+G V WG G GQLG G
Sbjct: 104 SGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVVTDVGLVMCWGKGNSGQLGQGD----- 158
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
T L+P R S + K +++IACG H+ ++ G + ++
Sbjct: 159 WTSSLLP---------------RTVSTLYNEK-----IRQIACGMAHTLALSVNGEIYSW 198
Query: 314 GWGLYGQ 320
G G GQ
Sbjct: 199 GAGADGQ 205
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
KI K A G HTL++S G+V+ WG +GQLG G
Sbjct: 348 KIIKAACGDTHTLVISTAGEVFAWGAAEDGQLGTG 382
>gi|332819953|ref|XP_517337.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Pan
troglodytes]
Length = 976
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 60/134 (44%), Gaps = 28/134 (20%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH--------- 264
I VA G H+L LSD GQ++ WG G +GQLGL + V P LI L
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCG 145
Query: 265 ------AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
A+ ++ P V+ V I+CG H+AV+T +G + TFG G
Sbjct: 146 NWHCLALAADRESPCHVKLLRTQK--------VVYISCGEEHTAVLTKSGGVFTFGAGSC 197
Query: 319 GQRMAKCLAGDGIN 332
GQ L D +N
Sbjct: 198 GQ-----LGHDSMN 206
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 122/301 (40%), Gaps = 57/301 (18%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
WGY P S L I A ++CG S + V CG ++ E G++ T G +
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 62
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
+GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 63 KGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA---------- 110
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
GS G +T A+P ++ ++ + + S A+ E
Sbjct: 111 ---GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADRE--- 157
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
SPC V L K+ ++ G HT +L+ G V+ +G G GQLG S V
Sbjct: 158 -SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV------- 209
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYG 319
R +L G S V +IACG +H+ A V +G + FG G G
Sbjct: 210 --------NPRRVLELMG----------SEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 251
Query: 320 Q 320
Q
Sbjct: 252 Q 252
>gi|119622536|gb|EAX02131.1| RCC1 domain containing 1, isoform CRA_b [Homo sapiens]
Length = 390
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G AL +G++ +WG GQ L G EP L +V A AAG H
Sbjct: 180 GAEHALLLDAAGQVFSWGGGR-HGQ--LGHGTLEAELEPRLLEALQGLVMAEVAAGGWHS 236
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V V+E G++Y WGW E A TR+ G + +++T E+
Sbjct: 237 VCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREAT----------------ELNED 280
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ ++T A + + P + F P L+ L G K + G RHT +++ G+++
Sbjct: 281 GSQVKRTGGAEDGAPAPFIAVQPF---PALLDLPMGSDAVKASCGSRHTAVVTRTGELYT 337
Query: 236 WGYGGEGQLG 245
WG+G GQLG
Sbjct: 338 WGWGKYGQLG 347
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 17/135 (12%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L +R + +
Sbjct: 213 LEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETV- 270
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI---------------ACGGRHSAVVT 305
E +D + R G A V+ +CG RH+AVVT
Sbjct: 271 AREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVT 330
Query: 306 DAGALLTFGWGLYGQ 320
G L T+GWG YGQ
Sbjct: 331 RTGELYTWGWGKYGQ 345
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 27/131 (20%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P L P ++ ++ G H L+L GQV+ WG G GQLG G+ ++ P L+
Sbjct: 162 APFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT-LEAELEPRLLEA 220
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQR 321
L QG V + E+A GG HS V++ G + +GW GQ
Sbjct: 221 L--------------QGLV----------MAEVAAGGWHSVCVSETGDIYIWGWNESGQL 256
Query: 322 M--AKCLAGDG 330
+ LA DG
Sbjct: 257 ALPTRNLAEDG 267
>gi|348682073|gb|EGZ21889.1| hypothetical protein PHYSODRAFT_345761 [Phytophthora sojae]
Length = 821
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 129/324 (39%), Gaps = 72/324 (22%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-------VVKAAAGWAH 115
+LA +E G++ WG EGQ L G LP V K + G +H
Sbjct: 47 SLALNEFGQVFAWGRGR-EGQ--LGLGDVAGVASAVALPRRVGGELAGQLVTKISCGESH 103
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTR-DFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
+++T +G+V+ WG +P AKV + G+A +T + + L +E+ + +
Sbjct: 104 SLALTVSGDVFMWGL---LPVAKVLYGEDGAATDASDRATVELAGLSSEELRRAQRARSR 160
Query: 175 EVVKR-----------RKTSSAREESENPASGDEFFTL-SPCLV-TLNPG----VKITKV 217
E ++R R + E++ + + + T+ +PC+ L G + +T +
Sbjct: 161 EELRRHMDDSIMARLVRDSMQVYEDAGDASDSVKVQTVRAPCMTPRLCTGPLSRLVVTNI 220
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC----LEHAASGKDRPL 273
AAG H+L+ + G V+ GY GQLGLGSR + +EH A G+ L
Sbjct: 221 AAGFAHSLVTTSDGAVFSCGYNDNGQLGLGSRRNSAEFQRIRALEGYFIEHIACGQQHSL 280
Query: 274 LV------RQGSVNSSGKAGRSYV-------------------------------KEIAC 296
+ +++ RS V +A
Sbjct: 281 ACSRIVGSEETTLDEDDPKSRSGVCFSWGLGVLGQLGTGINISWLPEEVKLARPAVSVAA 340
Query: 297 GGRHSAVVTDAGALLTFGWGLYGQ 320
G HS VTD G + T+G YGQ
Sbjct: 341 GSHHSVGVTDDGKVYTWGHSEYGQ 364
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 55/116 (47%), Gaps = 24/116 (20%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
I +AG RH+L L++ GQV+ WG G EGQLGLG + AS P
Sbjct: 37 IVDFSAGERHSLALNEFGQVFAWGRGREGQLGLGD-------------VAGVASAVALPR 83
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQRMAKCLAGD 329
V G+ V +I+CG HS +T +G + F WGL +AK L G+
Sbjct: 84 RV-------GGELAGQLVTKISCGESHSLALTVSGDV--FMWGLLP--VAKVLYGE 128
>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
latipes]
Length = 1059
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 48/137 (35%), Positives = 62/137 (45%), Gaps = 28/137 (20%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP-HL-----IPCLEHA 265
V++ +VA G H+L LS G ++ WG GQLGLG + + P HL IP + A
Sbjct: 137 VQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIA 196
Query: 266 ASGKDRPLLVRQGSVNSSG---------------------KAGRSY-VKEIACGGRHSAV 303
A G L G+V G KA RS V I+CG H+A
Sbjct: 197 AGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAA 256
Query: 304 VTDAGALLTFGWGLYGQ 320
+T G + TFG G YGQ
Sbjct: 257 LTKEGGVFTFGAGGYGQ 273
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 24/107 (22%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
I ++ G HTL L+D GQV+ WG G +GQLGL + + + P I L
Sbjct: 86 IVALSCGESHTLALNDKGQVFSWGLGSDGQLGLNNFEECIRVPRNIKSLSDVQ------- 138
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V ++ACG HS ++ G + ++G YGQ
Sbjct: 139 -----------------VAQVACGYWHSLALSKGGHIFSWGQNRYGQ 168
>gi|194227810|ref|XP_001917704.1| PREDICTED: LOW QUALITY PROTEIN: x-linked retinitis pigmentosa
GTPase regulator-like [Equus caballus]
Length = 915
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 27/115 (23%)
Query: 208 LNPGV--KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
L PG+ K+ +VA GG HT++L++ V+ +G G GQLGLG+ I P +I EH
Sbjct: 237 LVPGIPEKVIQVACGGGHTVVLTE-NAVYTFGLGQFGQLGLGTFIFETSEPTVI---EHI 292
Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
K + I+CG H+A++TD G + TFG G +G+
Sbjct: 293 KDQK---------------------ISYISCGENHTALITDTGLIYTFGDGRHGK 326
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 59/139 (42%), Gaps = 31/139 (22%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--------RIKMVPT 255
C+ L P K+ VA G HT++ ++ G+V+ G EGQLGLG RIK +
Sbjct: 80 CIKALKPE-KVKFVACGRTHTIVATEGGKVYATGGNSEGQLGLGDDEDRNTFHRIKFFTS 138
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
H I L +S L G + NS G+ G + ++
Sbjct: 139 QHKIKQLSAGSSSSAA--LTEDGELFMWGDNSEGQIGLKNIDNVCVPHQVTIGKPISWVS 196
Query: 296 CGGRHSAVVTDAGALLTFG 314
CG HSA +T G L TFG
Sbjct: 197 CGYYHSAFITTEGELYTFG 215
>gi|301097379|ref|XP_002897784.1| regulator of chromosome condensation (RCC1), putative [Phytophthora
infestans T30-4]
gi|262106532|gb|EEY64584.1| regulator of chromosome condensation (RCC1), putative [Phytophthora
infestans T30-4]
Length = 1396
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 106/294 (36%), Gaps = 49/294 (16%)
Query: 43 PARLCGG----DSWKDVCGGGCGFALATSESGK-LITWGSA-----DDEGQSYLTSGKHG 92
P RL G ++ FAL + G L WG D E S
Sbjct: 412 PVRLIGAFVTLNAKLRTLAASSTFALGVQDDGHSLFAWGRCLPRIYDQEAASESEVCLLQ 471
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
TP + A V + A G H + +T+ G V++WG+ D G G +
Sbjct: 472 ATPRQLHIRLAAPVTEVACGLRHALVLTQDGVVHSWGFN----------DHGQLGHGSAE 521
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
+ +++ A D+R+GEE E AS + C +
Sbjct: 522 TVAARTSGRVRYASYYDQRSGEE-------------EEYLASPTKLLYFEGCAAQQADPI 568
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM----VPTPHLIPCLEHAASG 268
+ V G + + LS G V+ WG EGQLG G + + H++ +
Sbjct: 569 PVAHVCCGDYYCMALSRAGDVFTWGEASEGQLGHGETHEYYQVALADRHMVNS-AYTYLA 627
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQR 321
+ P+L + +IAC G HS A+ T+ F WG +G+R
Sbjct: 628 QPEPVLALSDVC----------IAQIACRGNHSVALSTELAGYRLFEWGNWGRR 671
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
F CL TL GV++ +++ G H+L ++ G+V+ WG G GQLG
Sbjct: 1272 FVAQPTCLPTL-VGVEMKQLSCGDAHSLAVTKHGRVFSWGRGTRGQLG 1318
>gi|410957260|ref|XP_003985249.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
[Felis catus]
Length = 1143
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 26/127 (20%)
Query: 195 GDEFFTLS-PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
G +F +++ P +V G+ + +++AG H++ LS G ++ WG GQLGLG
Sbjct: 291 GSQFASIAIPQIVENLSGIPLVQISAGKAHSMALSMSGNIYSWGRNDFGQLGLGH----- 345
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
GKD P L+ V+ +ACGG H+A++T G + TF
Sbjct: 346 ------------TDGKDFPSLIE--------ALDNQKVEFLACGGSHTALLTKDGLVFTF 385
Query: 314 GWGLYGQ 320
G G +GQ
Sbjct: 386 GAGKHGQ 392
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 102/236 (43%), Gaps = 50/236 (21%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKA 109
K + CG +LA S+ G+L WG + GQ + S P+ + +V+
Sbjct: 256 KXIIQITCGDYHSLALSKGGELFAWGQ-NLHGQLGIGSQFASIAIPQIVENLSGIPLVQI 314
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST--------------- 154
+AG AH ++++ +G +Y+WG DFG G D
Sbjct: 315 SAGKAHSMALSMSGNIYSWG----------RNDFGQLGLGHTDGKDFPSLIEALDNQKVE 364
Query: 155 -----GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLN 209
G +AL T+ AG K + ++E L P LVT
Sbjct: 365 FLACGGSHTALLTKDGLVFTFGAG----KHGQLGHNSTQNE----------LRPRLVTEL 410
Query: 210 PGVKITKVAAGGRHTL-ILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTPHLIPCLE 263
G ++T++A G +HTL +SD+G+V+ +G G EGQLG G+ +++P P +P E
Sbjct: 411 AGNRVTQIACGRQHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNE 466
>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
Length = 4502
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 58/109 (53%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L LS G+V+ WG G +G+LG G++ +PC DR
Sbjct: 3701 VKKVAVNSGGKHCLALSSEGEVYSWGEGEDGKLGHGNK---------LPC--------DR 3743
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P ++ + GK V ++ACGG HSA +T G L T+G G YG+
Sbjct: 3744 PRIIE----SLRGKD----VVDVACGGAHSAAITALGELYTWGKGRYGR 3784
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
V+ V +GGRH L L+ G+V+ WG G +G+LG G + + TP C+E A +G
Sbjct: 2785 VRKVAVHSGGRHALALTADGRVFSWGEGDDGKLGHGD-VTSLDTPR---CIE-ALNG--- 2836
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+++A G HSA VT +G L T+G G YG+
Sbjct: 2837 -----------------FRVRDVAAGSNHSAAVTSSGELYTWGLGEYGR 2868
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 110/277 (39%), Gaps = 64/277 (23%)
Query: 63 ALATSESGKLITWGSADD--EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
ALA + G++ +WG DD G +TS +TP V AAG H +VT
Sbjct: 2797 ALALTADGRVFSWGEGDDGKLGHGDVTSL---DTPRCIEALNGFRVRDVAAGSNHSAAVT 2853
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK-- 178
+GE+YTWG E +G G D+ + + E G+ VV+
Sbjct: 2854 SSGELYTWGLGE----------YGRLG--HGDNLTQLTPKRVESL------VGQRVVQVS 2895
Query: 179 ---RRKTSSAREESENPAS-GD-EFFTL---------SPCLVTLNPGVKITKVAAGGRHT 224
R + A E S GD +F L SPCLV G+ + V G + +
Sbjct: 2896 CGSRDAQTLALVEGGLVYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGVCHVECGAQFS 2955
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
+ L+ G V+ WG G +LG GS + V P L+ G
Sbjct: 2956 VALTCNGHVYTWGKGDYFRLGHGSD-QHVRWPTLV-----------------------EG 2991
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQR 321
G+ + ++ G H VTDAG + +G +GQ+
Sbjct: 2992 LRGKKVIG-VSVGALHCLAVTDAGQVFAWGDNDHGQQ 3027
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE----ASVVK 108
VC CG F++A + +G + TWG D Y G + +P E V+
Sbjct: 2945 VCHVECGAQFSVALTCNGHVYTWGKGD-----YFRLGHGSDQHVRWPTLVEGLRGKKVIG 2999
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
+ G HC++VT+AG+V+ WG
Sbjct: 3000 VSVGALHCLAVTDAGQVFAWG 3020
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
G K+ ++ G H ++ +D G+V+ WG EGQLG G+ + P L+ L++
Sbjct: 3912 GKKVISISTGALHCVVCTDQGEVYTWGDNDEGQLGDGTTTG-IQKPRLVAALQN 3964
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
P LV G K+ V+ G H L ++D GQV+ WG GQ G GS
Sbjct: 2986 PTLVEGLRGKKVIGVSVGALHCLAVTDAGQVFAWGDNDHGQQGNGS 3031
>gi|328704352|ref|XP_003242465.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Acyrthosiphon pisum]
Length = 893
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 129/330 (39%), Gaps = 63/330 (19%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKH 91
E++ ILSP + +S ++ CG LA +E G+L GS +D GQ G
Sbjct: 37 EENYILSP--EEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACGS-NDFGQL----GHD 89
Query: 92 GETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWGWREC-----------VPSAK 138
G + +P S+V A G AH +++ E G++YTWG C K
Sbjct: 90 GCRTKLQKIPGVESLVMTSVACGEAHSMALNEWGQLYTWGSDSCGQLGLETDEGIQYKPK 149
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
+ + S Q S G + + E + S+
Sbjct: 150 IVKTLASMLLVQI-SCGYKHCMALTNHGELYTWGSNEFGQLGLGLGPGNVSK-------- 200
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
P LV G+ I+ +A GG H+ ++S G V+GWG GQLG+ S+ + L
Sbjct: 201 ----PTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTSLSSPAQL 256
Query: 259 IPC----LEHAASGKDRP-LLVRQGSVNS--SGKAGR--------------------SYV 291
+++ A G+D L G V + +G G+ S V
Sbjct: 257 KTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKVLELMGSTV 316
Query: 292 KEIACGGRHS-AVVTDAGALLTFGWGLYGQ 320
++ CG RH+ +V G + +FG G GQ
Sbjct: 317 TQVTCGRRHTLTLVPSKGRVYSFGLGSVGQ 346
>gi|410896622|ref|XP_003961798.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Takifugu
rubripes]
Length = 531
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 84/200 (42%), Gaps = 31/200 (15%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT---EASVVKAAAGWAHCVSVT 120
L +E G+L WG G S L +G + P + V + A G H +++T
Sbjct: 88 LLATEDGELFAWGH---NGYSQLGNGTTNQGVAPVLVSATLLNRKVTEVACGSHHSMALT 144
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
++GEVY WG+ C G GS ST Q P + R +V +
Sbjct: 145 DSGEVYAWGYNNC----------GQVGS---GSTANQPT-PRRVSSCLQNRVAVSIVCGQ 190
Query: 181 KTSSAREESE-----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
+S A ++ G+ L+PC + G+ + +V +G H+L L+D
Sbjct: 191 TSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLVALQGLCVQQVVSGYAHSLALTD 250
Query: 230 MGQVWGWGYGGEGQLGLGSR 249
G ++ WG GQLG G++
Sbjct: 251 EGLLYAWGANTYGQLGTGNK 270
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 35/152 (23%)
Query: 201 LSPCLVT---LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
++P LV+ LN K+T+VA G H++ L+D G+V+ WGY GQ+G GS PTP
Sbjct: 116 VAPVLVSATLLNR--KVTEVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQ-PTPR 172
Query: 258 LI-PCLEHAAS-----GKDRPL-LVRQGSV-----NSSGKAGRSY--------------- 290
+ CL++ + G+ L +V G V N +G+ G
Sbjct: 173 RVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLVALQG 232
Query: 291 --VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+++ G HS +TD G L +G YGQ
Sbjct: 233 LCVQQVVSGYAHSLALTDEGLLYAWGANTYGQ 264
>gi|26327145|dbj|BAC27316.1| unnamed protein product [Mus musculus]
Length = 551
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 39/221 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT++ G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHIVLATTD-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 207
Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ + S A ++ +SG++ +PC V G+++ +VA
Sbjct: 208 MNISCGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ---PTPCRVAALQGIRVQRVAC 264
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
G HTL+L+D GQ++ WG GQLG G++ PTP ++
Sbjct: 265 GYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVV 305
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ + G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 259 VQRVACGYAHTLVLTDEGQIYAWGANSYGQ 288
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G++Y WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 176 WGYNNSGQ 183
>gi|148672794|gb|EDL04741.1| mCG16651 [Mus musculus]
Length = 462
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 70/153 (45%), Gaps = 31/153 (20%)
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG--SRIKMVP-- 254
+ P + G+KI +V+ G H+L LS+ G V+ WG EGQLGLG SR + +P
Sbjct: 114 ISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQK 173
Query: 255 --TPHLIPCLEHAASGKDRPLLVRQGS-----VNSSGKAGRS--YVKE------------ 293
+ IP + AA G L G+ N SG+ S VKE
Sbjct: 174 VKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALK 233
Query: 294 ------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
I+CG H+AV+T+ G + TFG GQ
Sbjct: 234 NLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQ 266
>gi|62088666|dbj|BAD92780.1| RCC1-like G exchanging factor RLG variant [Homo sapiens]
Length = 556
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 92/231 (39%), Gaps = 34/231 (14%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL + K C G G LAT+E G++ TWG S L +G P
Sbjct: 94 PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 149
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG + ++G ST
Sbjct: 150 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTVN 196
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLV 206
Q +K + + + E G+ +PC V
Sbjct: 197 QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRV 256
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 257 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 307
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 145 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 203
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 204 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 263
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 264 VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 293
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 236
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 237 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 86 GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 140
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 141 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 180
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 181 WGYNNSGQ 188
>gi|348508280|ref|XP_003441682.1| PREDICTED: leucine-rich repeat and WD repeat-containing protein
KIAA1239-like [Oreochromis niloticus]
Length = 2697
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 90/246 (36%), Gaps = 85/246 (34%)
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ 164
SVV A G HC++V+ +G V++WG E G+ LPT
Sbjct: 1762 SVVAMACGQDHCLAVSASGHVFSWGAGE---------------------DGQLGLLPT-- 1798
Query: 165 APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
P S R P V + + I +VA G H+
Sbjct: 1799 -PSSSHR-------------------------------PSKVPIPLPIPIIQVACGNSHS 1826
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL------EHAASGKDRPLLVRQG 278
L L+ G V+ WG GQLGLG + + TP +I L + AA G L
Sbjct: 1827 LALTKGGDVFSWGLNSHGQLGLGKEVPVQHTPVIICALAGVAVTQIAAGGTHSLFLTLAD 1886
Query: 279 SV-----NSSGKAGRSYVKE-------------------IACGGRHSAVVTDAGALLTFG 314
V N G+ G + V E I+CG HSAV+T G + TFG
Sbjct: 1887 LVYCCGANKCGQLGVNRVDEKGRFNICMVPALRPLSVSFISCGESHSAVLTKDGKVYTFG 1946
Query: 315 WGLYGQ 320
G GQ
Sbjct: 1947 DGSQGQ 1952
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 27/137 (19%)
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI--KMVPTPHLIPCLEHAAS 267
PGV ITK+ G RHTL L+ G V G+ +GQLG + K++ + + A
Sbjct: 1710 PGV-ITKICCGDRHTLFLNADGNVLSCGHNSQGQLGRQKKKNGKIIAQVEALGSVVAMAC 1768
Query: 268 GKDRPLLVR-QGSVNS--SGKAGR---------------------SYVKEIACGGRHSAV 303
G+D L V G V S +G+ G+ + ++ACG HS
Sbjct: 1769 GQDHCLAVSASGHVFSWGAGEDGQLGLLPTPSSSHRPSKVPIPLPIPIIQVACGNSHSLA 1828
Query: 304 VTDAGALLTFGWGLYGQ 320
+T G + ++G +GQ
Sbjct: 1829 LTKGGDVFSWGLNSHGQ 1845
>gi|340507220|gb|EGR33218.1| hypothetical protein IMG5_058940 [Ichthyophthirius multifiliis]
Length = 660
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 98/265 (36%), Gaps = 73/265 (27%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG LA +E+ ++ WG G Y G+ G P P T V G H
Sbjct: 153 ACGDYHTLALTENDQVYAWG-----GTLYKKVGQRGGKPGPIHQLTNKGVTYIDCGDFHS 207
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
V++T G++YTW G G FQ + + P E++
Sbjct: 208 VAITNQGDIYTW---------------GGGGQFQNKGQLGLGHMKDIEIP-------EQI 245
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+FF K+ KV+ G HT+ L D Q++GW
Sbjct: 246 --------------------QFF----------KNKKVIKVSCGQFHTMALIDDNQLYGW 275
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS-YVKEIA 295
G G G+LG G + + +L + ++N + + + +I
Sbjct: 276 GAGELGELGSGK-------------VLYFLYLLIILILKKYITINKNNYYKKDPQISDIK 322
Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQ 320
CGG H+ ++ + G + + G+G YGQ
Sbjct: 323 CGGHHTLILLNIGYVYSTGYGSYGQ 347
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 101/283 (35%), Gaps = 74/283 (26%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWG---SADDEGQSYLTSGKHGETPEP 97
PI G ++ D CG ++A + G + TWG ++GQ L K E PE
Sbjct: 188 PIHQLTNKGVTYID-CGDF--HSVAITNQGDIYTWGGGGQFQNKGQLGLGHMKDIEIPEQ 244
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
V+K + G H +++ + ++Y WG E G GS
Sbjct: 245 IQFFKNKKVIKVSCGQFHTMALIDDNQLYGWGAGE----------LGELGS--------- 285
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKV 217
G+ + + + + ++ P +I+ +
Sbjct: 286 ---------------GKVLYFLYLLIILILKKYITINKNNYYKKDP---------QISDI 321
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
GG HTLIL ++G V+ GYG GQLGL + H L + K
Sbjct: 322 KCGGHHTLILLNIGYVYSTGYGSYGQLGLKT-----TNNHCEFQLVWTLTKKK------- 369
Query: 278 GSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +IA G HS V+TD + + G+ +GQ
Sbjct: 370 -------------IIKIAAGWNHSLVLTDTNDVFSCGYNAWGQ 399
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 39/89 (43%), Gaps = 25/89 (28%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
KI K+AAG H+L+L+D V+ GY GQLGLG H+
Sbjct: 369 KIIKIAAGWNHSLVLTDTNDVFSCGYNAWGQLGLGDEESRTLFTHI-------------- 414
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
S AG++ V EI+ GG HS
Sbjct: 415 ----------SALAGKNVV-EISAGGSHS 432
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 35/115 (30%)
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG---YGGEGQLGLGSRIKMVPTPHLIPC 261
++T G+K+ +VA G HTL L++ QV+ WG Y GQ G
Sbjct: 140 ILTALKGIKVLQVACGDYHTLALTENDQVYAWGGTLYKKVGQRG---------------- 183
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
GK P ++ G +Y I CG HS +T+ G + T+G G
Sbjct: 184 ------GKPGP-------IHQLTNKGVTY---IDCGDFHSVAITNQGDIYTWGGG 222
>gi|302783358|ref|XP_002973452.1| hypothetical protein SELMODRAFT_99040 [Selaginella moellendorffii]
gi|300159205|gb|EFJ25826.1| hypothetical protein SELMODRAFT_99040 [Selaginella moellendorffii]
Length = 437
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 119/305 (39%), Gaps = 62/305 (20%)
Query: 56 CGGGCGFALATSESG----KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
CG C A+A S G ++ WG L SG + V++ A
Sbjct: 105 CGANCTAAIADSRDGTCRGRMWIWGQNQGSNSPRLFSG---------AFSSSTVVIQVAC 155
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G AH +++E G + TWG+ E + G G+ S K P E
Sbjct: 156 GGAHAAALSEHGVLQTWGYNEHGQLGRGISCEGLQGAKIVTSFVKFLNEPVETVKVKQVV 215
Query: 172 AGE----------EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE +V SS + + SG++ + P V GV + +++AGG
Sbjct: 216 CGEYHTAAIAHNGDVYTWGLGSSGQLGHRSLQSGNK--EVLPRRVVTLEGVDVVQISAGG 273
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSR-------------IKMVPTPHLIPCLEHAASG 268
H+ +S G ++ WG GQLGLG R + +P +IP +A+
Sbjct: 274 VHSCAISSAGGLYMWGGSHAGQLGLGPRQDRICGSSDIDFFFQRIPVL-VIPSGARSATC 332
Query: 269 KDRPLLVRQGS-------VNSSGKA--GRSY-----------VKEIAC---GGRHSAVVT 305
D LVR + NS G+A G++Y V EI C GG HSAV+T
Sbjct: 333 GDLHTLVRMANGRLLGCGYNSYGQADSGKAYYAWYPSPIDWCVGEITCLAAGGGHSAVLT 392
Query: 306 DAGAL 310
A L
Sbjct: 393 QASNL 397
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 96/260 (36%), Gaps = 42/260 (16%)
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPL---PTEASVVKAAAGWAHCVSVTEAGEVYTW 128
L WG + GQ+ S H P P + P+ ++ + G H ++ G ++TW
Sbjct: 12 LYAWGY-NQCGQAGQESAIHNAVPHPIRVAIHPSSLRLIAISCGLEHTAAIASDGSLFTW 70
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
G + FG G D + S P D+ T++ +
Sbjct: 71 G----------SNQFGQLG----DGSETNSDRPKRVYGLRDEAVKSVACGANCTAAIADS 116
Query: 189 SENPASGDEFF------TLSPCLVT--LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
+ G + + SP L + + + +VA GG H LS+ G + WGY
Sbjct: 117 RDGTCRGRMWIWGQNQGSNSPRLFSGAFSSSTVVIQVACGGAHAAALSEHGVLQTWGYNE 176
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
GQLG G + + ++ + P+ + VK++ CG H
Sbjct: 177 HGQLGRGISCEGLQGAKIVTSF---VKFLNEPVETVK-------------VKQVVCGEYH 220
Query: 301 SAVVTDAGALLTFGWGLYGQ 320
+A + G + T+G G GQ
Sbjct: 221 TAAIAHNGDVYTWGLGSSGQ 240
>gi|302823907|ref|XP_002993601.1| hypothetical protein SELMODRAFT_449178 [Selaginella moellendorffii]
gi|300138529|gb|EFJ05293.1| hypothetical protein SELMODRAFT_449178 [Selaginella moellendorffii]
Length = 441
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 119/306 (38%), Gaps = 64/306 (20%)
Query: 56 CGGGCGFALATSESG----KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
CG C A+A S G ++ WG L SG + V++ A
Sbjct: 105 CGANCTAAIADSRDGTCRGRMWIWGQNQGSNSPRLFSG---------VFSSSTVVIQVAC 155
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G AH +++E G + TWG+ E + G G+ S K P E
Sbjct: 156 GGAHAAALSEHGVLQTWGYNEHGQLGRGISCEGLQGAKIVTSFVKFLNEPVETVKVKQVV 215
Query: 172 AGE----------EVVKRRKTSSAREESENPASGD-EFFTLSPCLVTLNPGVKITKVAAG 220
GE +V SS + + SG+ E F P V GV + +++AG
Sbjct: 216 CGEYHTAAIAHNGDVYTWGLGSSGQLGHRSLQSGNKEVF---PRRVVTLEGVDVVQISAG 272
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSR-------------IKMVPTPHLIPCLEHAAS 267
G H+ +S G ++ WG GQLGLG R + +P +IP +A+
Sbjct: 273 GVHSCAISSAGGLYMWGGSHAGQLGLGPRQDRICGTSDIDFFFQRIPVL-VIPSGARSAT 331
Query: 268 GKDRPLLVRQGS-------VNSSGKA--GRSY-----------VKEIAC---GGRHSAVV 304
D LVR + NS G+A G++Y V EI C GG HSAV+
Sbjct: 332 CGDLHTLVRMANGRLLGCGYNSYGQADSGKAYYAWYPSPIDWCVGEITCLAAGGGHSAVL 391
Query: 305 TDAGAL 310
T A L
Sbjct: 392 TQASNL 397
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 96/260 (36%), Gaps = 42/260 (16%)
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPL---PTEASVVKAAAGWAHCVSVTEAGEVYTW 128
L WG + GQ+ S H P P + P+ ++ + G H ++ G ++TW
Sbjct: 12 LYAWGY-NQCGQAGQESAIHSAVPHPIRVAIHPSSLRLIAISCGLEHTAAIASDGSLFTW 70
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
G + FG G D + S P D+ T++ +
Sbjct: 71 G----------SNQFGQLG----DGSETNSDRPKRVYGLRDEAVKSVACGANCTAAIADS 116
Query: 189 SENPASGDEFF------TLSPCLVT--LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
+ G + + SP L + + + +VA GG H LS+ G + WGY
Sbjct: 117 RDGTCRGRMWIWGQNQGSNSPRLFSGVFSSSTVVIQVACGGAHAAALSEHGVLQTWGYNE 176
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
GQLG G + + ++ + P+ + VK++ CG H
Sbjct: 177 HGQLGRGISCEGLQGAKIVTSF---VKFLNEPVETVK-------------VKQVVCGEYH 220
Query: 301 SAVVTDAGALLTFGWGLYGQ 320
+A + G + T+G G GQ
Sbjct: 221 TAAIAHNGDVYTWGLGSSGQ 240
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 122/322 (37%), Gaps = 55/322 (17%)
Query: 19 ETVVYMWGYLP-GTSPEKSPILS--PIPARLCGGDSWKDVCGGGCGF--ALATSESGKLI 73
+V+Y WGY G + ++S I S P P R+ S + CG A + G L
Sbjct: 9 RSVLYAWGYNQCGQAGQESAIHSAVPHPIRVAIHPSSLRLIAISCGLEHTAAIASDGSLF 68
Query: 74 TWGSADDEGQSYLTSGKHGETPEP---FPLPTEASVVKAAAGWAHCVSV-------TEAG 123
TWGS + GQ L G + P + L EA VK+ A A+C + T G
Sbjct: 69 TWGS-NQFGQ--LGDGSETNSDRPKRVYGLRDEA--VKSVACGANCTAAIADSRDGTCRG 123
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGS--FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
++ WG + S ++ S+ + Q G +A +E E R
Sbjct: 124 RMWIWGQNQGSNSPRLFSGVFSSSTVVIQVACGGAHAAALSEHGVLQTWGYNEHGQLGRG 183
Query: 182 TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
S + + F P VK+ +V G HT ++ G V+ WG G
Sbjct: 184 ISCEGLQGAKIVTSFVKFLNEPV-----ETVKVKQVVCGEYHTAAIAHNGDVYTWGLGSS 238
Query: 242 GQLG---LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
GQLG L S K V P + LE G D V +I+ GG
Sbjct: 239 GQLGHRSLQSGNKEV-FPRRVVTLE----GVD--------------------VVQISAGG 273
Query: 299 RHSAVVTDAGALLTFGWGLYGQ 320
HS ++ AG L +G GQ
Sbjct: 274 VHSCAISSAGGLYMWGGSHAGQ 295
>gi|402902028|ref|XP_003913931.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 2
[Papio anubis]
Length = 355
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 121/323 (37%), Gaps = 93/323 (28%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCG--GDSWKDVCGGGC 60
G+ E + + E V+ Y GT +S + +P +L G G K + G
Sbjct: 28 GTSASEALYVTDDDEVFVFGLNYSNCLGTGDNQSTL---VPKKLEGLSGKKIKSLSYGSG 84
Query: 61 GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCV 117
L ++E G + WG G S L +G + P + T VV+ A G H +
Sbjct: 85 PHVLLSTEDGVVYAWG---HNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSM 141
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++ GEV+ WG+ C G GS ST Q PT
Sbjct: 142 ALAADGEVFAWGYNNC----------GQVGS---GSTANQ---PT--------------- 170
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
R+ T+ + ++ +A G ++ + D G+V+GWG
Sbjct: 171 PRKVTNCLHIK------------------------RVVGIACGQTSSMAVLDNGEVYGWG 206
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
Y G GQLGLG+ + TP VR +++S V +I CG
Sbjct: 207 YNGNGQLGLGNNGNQL-TP------------------VRVAALHS------VCVNQIVCG 241
Query: 298 GRHSAVVTDAGALLTFGWGLYGQ 320
H+ +TD G L +G YGQ
Sbjct: 242 YAHTLALTDEGLLYAWGANTYGQ 264
>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 598
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 82/201 (40%), Gaps = 53/201 (26%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
F+ A S SG++ TWG + GQ L +G+ G P P+P V+ A G HC+++T
Sbjct: 238 FSAAVSLSGRVFTWGR-NKYGQ--LGNGEFGNAFLPQPVPGIEQAVQVACGDHHCIALTR 294
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
GEVYTWG S+G + S AL PS +
Sbjct: 295 WGEVYTWGLH-------------SSGQLGQGSNLGSEALNGCLCSPS------------R 329
Query: 182 TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
S ++S I +V+AG RH+ +S Q+WG G E
Sbjct: 330 VDSLADQS------------------------IRQVSAGARHSFFVSPGEQLWGAGANDE 365
Query: 242 GQLGLGSRIKMVPTPHLIPCL 262
GQL L S + V P +P L
Sbjct: 366 GQLALQS-VPSVALPTRVPGL 385
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 111/294 (37%), Gaps = 45/294 (15%)
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
L TWG +D GQ+ ++ PEP VV AA G + VT GE+YT G
Sbjct: 39 LYTWGRSD-LGQTGSGRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRDGELYTTGSN 97
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE--EVVKRRKTSS-AREE 188
+ R G G + SAL G VV ++ E
Sbjct: 98 DA-------RQLGVKGREVALEPIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAWGSNE 150
Query: 189 SENPASGDEFFTLS-PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
+G+ + + P ++ G +VAAG H+L L+ GQV+ +G G G LG G
Sbjct: 151 YGQLGTGEVGASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGSFGALGHG 210
Query: 248 SRIKMVPTPHLIPCL------EHAASGKDRPLLVRQGSVNS----------SGKAGRSYV 291
+ P L+ L AA + G V + +G+ G +++
Sbjct: 211 D-VNNRAKPTLVQALWPEAIVSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNGEFGNAFL 269
Query: 292 KE----------IACGGRHSAVVTDAGALLTFGWGLYGQRMAKCLAGDGINMGS 335
+ +ACG H +T G + T+G GQ G G N+GS
Sbjct: 270 PQPVPGIEQAVQVACGDHHCIALTRWGEVYTWGLHSSGQ------LGQGSNLGS 317
>gi|328865201|gb|EGG13587.1| hypothetical protein DFA_11348 [Dictyostelium fasciculatum]
Length = 628
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 106/280 (37%), Gaps = 46/280 (16%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEASVVKA----AA 111
G ++A S G+L +WG T G+ G E P P A V K A
Sbjct: 192 GAQHSMALSNYGELYSWGCG--------TGGRTGHGSEAPSLSPQVVSALVGKQITSMAG 243
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G H + G VYTWGW + +G G ++T K+ P +
Sbjct: 244 GMLHSAATDLRGSVYTWGWNK----------YGQLG----NNTAKKHLSPNKLRDMEKHH 289
Query: 172 AGEEVVKRRKTSSAREESENPASGDEF--------FTLSPCLVTLNPGVKITKVAAGGRH 223
+ + T E + G + S ++ + +G H
Sbjct: 290 VVKVTCGKNHTHLLTAEGHIYSFGFNVCGQLGVGGYADSQQPKKVDLPEHAVDIVSGYYH 349
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
TL L++ G V+ WGY +G LGLG P LIP L H + S+ S
Sbjct: 350 TLCLTNKGNVYSWGYMSDGALGLGDIAGHQSKPKLIP-LSHIRHNYSDS-MDSYNSIYES 407
Query: 284 GKAGRS--YVK-----EIACGGRHSAVVTDAGALLTFGWG 316
G G + Y K +IA G +SA++T +G L FG+G
Sbjct: 408 GGEGTNPRYAKGDVAEKIAAGAWNSAIITTSGKLYCFGFG 447
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 25/127 (19%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
+GD+ +P + + T V+ G +H++ LS+ G+++ WG G G+ G GS
Sbjct: 166 TGDQTNRATPTPIAIATPTVFTSVSCGAQHSMALSNYGELYSWGCGTGGRTGHGSE---- 221
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
P L P + A GK + +A G HSA G++ T+
Sbjct: 222 -APSLSPQVVSALVGKQ--------------------ITSMAGGMLHSAATDLRGSVYTW 260
Query: 314 GWGLYGQ 320
GW YGQ
Sbjct: 261 GWNKYGQ 267
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 25/126 (19%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G E +LSP +V+ G +IT +A G H+ G V+ WG+ GQLG + K
Sbjct: 219 GSEAPSLSPQVVSALVGKQITSMAGGMLHSAATDLRGSVYTWGWNKYGQLGNNTAKK--- 275
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
HL P N + +V ++ CG H+ ++T G + +FG
Sbjct: 276 --HLSP--------------------NKLRDMEKHHVVKVTCGKNHTHLLTAEGHIYSFG 313
Query: 315 WGLYGQ 320
+ + GQ
Sbjct: 314 FNVCGQ 319
>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
Full=HECT domain and RCC1-like domain-containing protein
2
gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
Length = 4912
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R+ DR
Sbjct: 4136 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSY-----------------DR 4178
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P LV + S V +IACG HSA +T +G +LT+G G YG+
Sbjct: 4179 PKLVEHLNGMS--------VADIACGSAHSAAITASGHVLTWGKGRYGR 4219
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 27/110 (24%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R + D+
Sbjct: 3073 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL-----------------DK 3115
Query: 272 PLLVRQGSVNSSGKAGRS-YVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P LV +A R+ ++++ACG HSA ++ G L T+G G YG+
Sbjct: 3116 PRLV---------EALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3156
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
G F+LA + +G++ TWG D Y G +H P+P V+ A G
Sbjct: 3239 GAQFSLALTRAGEVWTWGKGD-----YYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGAL 3293
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+AG+VY WG
Sbjct: 3294 HCLAVTDAGQVYAWG 3308
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 79/222 (35%), Gaps = 66/222 (29%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
L G + CG G L ++ + +WG D Y G+ G P E+
Sbjct: 4237 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKLPYKIESL 4291
Query: 105 ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
VVK G V++T++G VYTWG G F + G
Sbjct: 4292 AGLGVVKVECGSQFSVALTKSGAVYTWG----------------KGDFHRLGHG------ 4329
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
+ V+R K +A + G KI +A G
Sbjct: 4330 -----------SVDHVRRPKKVAALQ-----------------------GKKIISIATGS 4355
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
H + SD G+V+ WG EGQLG G+ + + P L+ L+
Sbjct: 4356 LHCVACSDSGEVYTWGDNDEGQLGDGT-VTAIQRPRLVAALQ 4396
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 114/309 (36%), Gaps = 62/309 (20%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAA---G 112
GG S+ GK+ G + L G P P LP VVK A G
Sbjct: 3025 AGGSKSLFIVSQDGKVYACGEGTN---GRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSG 3081
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H +++T G+V++WG E G G + + K + +A K+
Sbjct: 3082 GKHALALTLDGKVFSWGEGE----------DGKLGHGNRTTLDKPRLVEALRA----KKI 3127
Query: 173 GEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
+ +++ + E GD L P LVT G ++ +VA G R
Sbjct: 3128 RDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSR 3187
Query: 223 --HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDRPL-L 274
TL L++ G V+ WG G G+LG G + TPH I L G L L
Sbjct: 3188 DAQTLALTEDGAVFSWGDGDFGKLGRGGS-EGSDTPHEIERLSGIGVVQIECGAQFSLAL 3246
Query: 275 VRQGSV--------NSSGKAGRSYVKE--------------IACGGRHSAVVTDAGALLT 312
R G V G G +V++ +A G H VTDAG +
Sbjct: 3247 TRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYA 3306
Query: 313 FGWGLYGQR 321
+G +GQ+
Sbjct: 3307 WGDNDHGQQ 3315
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHC 116
G F++A S G+L TWG A G + G P +V A AHC
Sbjct: 779 AGSQFSVALSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHC 838
Query: 117 VSVTEAGEVYTWG 129
++++ +GEV+ WG
Sbjct: 839 LALSSSGEVFGWG 851
>gi|355715932|gb|AES05447.1| regulator of chromosome condensation and BTB domain containing
protein 2 [Mustela putorius furo]
Length = 344
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 35/224 (15%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL + K C G G LAT+E G++ TWG S L +G P
Sbjct: 18 PRRLESLNGKKIACLSYGSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCH 73
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V + A G H + +T GEV+ WG + ++G ST
Sbjct: 74 ISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTAN 120
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA----SGDEFFTL-------SPCL 205
Q +P + + + S A + +G+ L +PC
Sbjct: 121 Q-LIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCR 179
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
+ G+++ +VA G HTL+L+D GQV+ WG GQLG G++
Sbjct: 180 IAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 223
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 29/149 (19%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K +T+VA G H+L+L+ G+V+ WGY GQ+G GS + +
Sbjct: 69 LVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQLIPRRVT 128
Query: 260 PCLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------YV 291
CL+ + A G+ + +V G V N +G+ G V
Sbjct: 129 GCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRV 188
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +ACG H+ V+TD G + +G YGQ
Sbjct: 189 QRVACGYAHTLVLTDEGQVYAWGANSYGQ 217
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S IP R+ G K V CG ++A +G++ WG
Sbjct: 102 VFAWGYNNSGQVGSGSTANQLIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGY- 160
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 161 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 211
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 10 GDVQSTIEPRRLESLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 64
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 65 -TNHGLVPC---------------HISTNLSNKQ----VTEVACGSYHSLVLTSDGEVFA 104
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 105 WGYNNSGQ 112
>gi|449280356|gb|EMC87683.1| RCC1 and BTB domain-containing protein 1 [Columba livia]
Length = 531
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 98/237 (41%), Gaps = 38/237 (16%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT +S I+ LCG G G L T E G++ WG G S L +G
Sbjct: 55 GTGDNQSTIVPKKLEALCGKKISSLSYGSGPHVVLCT-EDGEVYAWGH---NGYSQLGNG 110
Query: 90 KHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
+ P + T VV+ A G H ++++ G++Y WG+ C G
Sbjct: 111 TTNQGITPVQVCTNLLIKKVVEVACGSHHSMALSFDGDLYAWGYNNC----------GQV 160
Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR--KTSSAREESENPASG--------- 195
GS ST Q PT + S+ G+ VV +TSS S G
Sbjct: 161 GS---GSTANQ---PTPR-RVSNCLQGKMVVGIACGQTSSMAVVSNGEVYGWGYNGNGQL 213
Query: 196 ---DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
+ L+PC V GV I ++A G HTL L+D G ++ WG GQLG G++
Sbjct: 214 GLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNK 270
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
++P V N +K + +VA G H++ LS G ++ WGY GQ+G GS PTP +
Sbjct: 116 ITPVQVCTNLLIKKVVEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQ-PTPRRV 174
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
CL+ A G+ + +V G V N +G+ G
Sbjct: 175 SNCLQGKMVVGIACGQTSSMAVVSNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVC 234
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +IACG H+ +TD G L +G YGQ
Sbjct: 235 ILQIACGYAHTLALTDEGLLYAWGANTYGQ 264
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 38/152 (25%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T+ P + G KI+ ++ G G H ++ ++ G+V+ WG+ G QLG G+ +
Sbjct: 56 TGDNQSTIVPKKLEALCGKKISSLSYGSGPHVVLCTEDGEVYAWGHNGYSQLGNGTTNQG 115
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
+ TP + LL+++ V E+ACG HS ++ G L
Sbjct: 116 I-TPVQVC----------TNLLIKK-------------VVEVACGSHHSMALSFDGDLYA 151
Query: 313 FGWGLYGQ-------------RMAKCLAGDGI 331
+G+ GQ R++ CL G +
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRRVSNCLQGKMV 183
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 72/181 (39%), Gaps = 23/181 (12%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
+Y WGY G S P P R+ K V G CG ++A +G++ WG
Sbjct: 149 LYAWGYNNCGQVGSGSTANQPTPRRVSNCLQGKMVVGIACGQTSSMAVVSNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ L + + TP +++ A G+AH +++T+ G +Y WG
Sbjct: 208 NGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWG--------- 258
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
A ++ + TG +S + +P E VV+ SA + SG +
Sbjct: 259 -------ANTYGQLGTGNKS---NQLSPVQIMMEKERVVEIAACHSAHTSAAKTQSGQVY 308
Query: 199 F 199
Sbjct: 309 M 309
>gi|23503098|sp|Q92834.2|RPGR_HUMAN RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
Flags: Precursor
gi|119579846|gb|EAW59442.1| retinitis pigmentosa GTPase regulator, isoform CRA_b [Homo sapiens]
Length = 1020
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 26/119 (21%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P LV+ P K+ +VA GG HT++L++ V+ +G G GQLGLG+ + P +I
Sbjct: 234 TPQLVSEIPE-KVIQVACGGEHTVVLTE-NAVYTFGLGQFGQLGLGTFLFETSEPKVIEN 291
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +D+ + SY I+CG H+A++TD G + TFG G +G+
Sbjct: 292 I------RDQTI---------------SY---ISCGENHTALITDIGLMYTFGDGRHGK 326
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 54/139 (38%), Gaps = 31/139 (22%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
C+ L P K+ A G HTL+ ++ G V+ G EGQLGLG I +
Sbjct: 80 CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
H I L +A L G + NS G+ G V I+
Sbjct: 139 EHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWIS 196
Query: 296 CGGRHSAVVTDAGALLTFG 314
CG HSA VT G L FG
Sbjct: 197 CGYYHSAFVTTDGELYVFG 215
>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
Length = 4908
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R+ DR
Sbjct: 4132 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSY-----------------DR 4174
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P LV + S V +IACG HSA +T +G +LT+G G YG+
Sbjct: 4175 PKLVEHLNGMS--------VADIACGSAHSAAITASGHVLTWGKGRYGR 4215
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 27/110 (24%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R + D+
Sbjct: 3070 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL-----------------DK 3112
Query: 272 PLLVRQGSVNSSGKAGRS-YVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P LV +A R+ ++++ACG HSA ++ G L T+G G YG+
Sbjct: 3113 PRLV---------EALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3153
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
G F+LA + +G++ TWG D Y G +H P+P V+ A G
Sbjct: 3236 GAQFSLALTRAGEVWTWGKGD-----YYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGAL 3290
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+AG+VY WG
Sbjct: 3291 HCLAVTDAGQVYAWG 3305
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 79/222 (35%), Gaps = 66/222 (29%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
L G + CG G L ++ + +WG D Y G+ G P E+
Sbjct: 4233 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKLPYKIESL 4287
Query: 105 ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
VVK G V++T++G VYTWG G F + G
Sbjct: 4288 AGLGVVKVECGSQFSVALTKSGAVYTWG----------------KGDFHRLGHG------ 4325
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
+ V+R K +A + G KI +A G
Sbjct: 4326 -----------SVDHVRRPKKVAALQ-----------------------GKKIISIATGS 4351
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
H + SD G+V+ WG EGQLG G+ + + P L+ L+
Sbjct: 4352 LHCVACSDSGEVYTWGDNDEGQLGDGT-VTAIQRPRLVAALQ 4392
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 113/309 (36%), Gaps = 62/309 (20%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAA---G 112
GG S+ GK+ G + L G P P LP VVK A G
Sbjct: 3022 AGGSKSLFIVSQDGKVYACGEGTN---GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSG 3078
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H +++T G+V++WG E G G + + K + +A K+
Sbjct: 3079 GKHALALTLDGKVFSWGEGE----------DGKLGHGNRTTLDKPRLVEALRA----KKI 3124
Query: 173 GEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
+ +++ + E GD L P LV G ++ +VA G R
Sbjct: 3125 RDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNVTQLKPKLVVALAGRRVVQVACGSR 3184
Query: 223 --HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDRPL-L 274
TL L++ G V+ WG G G+LG G + TPH I L G L L
Sbjct: 3185 DAQTLALTEDGAVFSWGDGDFGKLGRGGS-EGSDTPHEIERLSGIGVVQIECGAQFSLAL 3243
Query: 275 VRQGSV--------NSSGKAGRSYVKE--------------IACGGRHSAVVTDAGALLT 312
R G V G G +V++ +A G H VTDAG +
Sbjct: 3244 TRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYA 3303
Query: 313 FGWGLYGQR 321
+G +GQ+
Sbjct: 3304 WGDNDHGQQ 3312
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 80/202 (39%), Gaps = 35/202 (17%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT------EASVVKAA-- 110
GC ++ A + G L+TWG +Y G HG + + LPT + VV A
Sbjct: 673 GCSYSAAITCGGNLLTWGRG-----TYARLG-HGNSDDR-SLPTLVVALSDHMVVDVALG 725
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
+G AH +++T G V+ WG D+G G+ + G + E P +
Sbjct: 726 SGDAHSLALTSEGLVFAWG----------DGDYGKLGN--GNCNGSLQPILVESLPRVQR 773
Query: 171 RAGEEVVKRRKTSSAREESENPAS--GDEFFTLS------PCLVTLNPGVKITKVAAGGR 222
+S + S A+ G + S P LV+ +I VA
Sbjct: 774 VFAGSQFSLALSSEGQLYSWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVA 833
Query: 223 HTLILSDMGQVWGWGYGGEGQL 244
H L LS G+V+GWG Q+
Sbjct: 834 HCLALSSSGEVFGWGRNDSQQI 855
>gi|74177548|dbj|BAB30989.3| unnamed protein product [Mus musculus]
Length = 596
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 70/153 (45%), Gaps = 31/153 (20%)
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG--SRIKMVP-- 254
+ P + G+KI +V+ G H+L LS+ G V+ WG EGQLGLG SR + +P
Sbjct: 71 ISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQK 130
Query: 255 --TPHLIPCLEHAASGKDRPLLVRQGS-----VNSSGKAGRS--YVKE------------ 293
+ IP + AA G L G+ N SG+ S VKE
Sbjct: 131 VKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALK 190
Query: 294 ------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
I+CG H+AV+T+ G + TFG GQ
Sbjct: 191 NLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQ 223
>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
Length = 4947
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 62/121 (51%), Gaps = 27/121 (22%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P LV V I KVA +GG+H L LS G+V+ WG G +G+LG G+R
Sbjct: 4164 TPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNR---------- 4213
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
DRP L+ S++ G V +IACG HSA +T G +LT+G G YG
Sbjct: 4214 -------DSYDRPKLIE--SLSGIG------VVDIACGSAHSACITIQGHVLTWGKGRYG 4258
Query: 320 Q 320
+
Sbjct: 4259 R 4259
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H + L+ G+V+ WG G +G+LG G+R+ + P LI L
Sbjct: 3115 VKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTL-EKPKLIETLR-------- 3165
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+++IACG HSA +T +G L T+G G YG+
Sbjct: 3166 ----------------TKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3198
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 116/310 (37%), Gaps = 75/310 (24%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
+P++ PILS + K G A+A + GK+ +WG +D GK
Sbjct: 3103 TPKQVPILSQYVVK-------KVAVHSGGKHAMALTLDGKVFSWGEGED--------GKL 3147
Query: 92 G-------ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
G E P+ + A G +H ++T +GE+YTWG E +G
Sbjct: 3148 GHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGE----------YG 3197
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR--KTSSAREESENPASGD-EFFTL 201
G + K + Q D R + R +T E+ + GD +F L
Sbjct: 3198 RLGHGDNCTQLKPKLVTALQ----DHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKL 3253
Query: 202 S---------PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
P V GV + ++ G + +L L+ G+VW WG G +LG G+ +
Sbjct: 3254 GRGGSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHGTDQHV 3313
Query: 253 -VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
PTP G G+ + +A G H VTD+G +
Sbjct: 3314 RKPTP-------------------------IQGLRGKKVI-HVAVGALHCLAVTDSGQVY 3347
Query: 312 TFGWGLYGQR 321
+G +GQ+
Sbjct: 3348 AWGDNDHGQQ 3357
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + + H P+ ++ A G HCV+
Sbjct: 4342 GSQFSVALTRSGSVYTWGKGDYHRLGH-GNTDHVRRPKKVAALQGKKIISIATGSLHCVA 4400
Query: 119 VTEAGEVYTWG 129
++AGEV+TWG
Sbjct: 4401 CSDAGEVFTWG 4411
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 78/222 (35%), Gaps = 66/222 (29%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
L G + CG G L ++ + +WG D Y G+ G P+ E+
Sbjct: 4277 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKVPMKIESL 4331
Query: 105 ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
V K G V++T +G VYTWG G + + G
Sbjct: 4332 AGLGVTKVECGSQFSVALTRSGSVYTWG----------------KGDYHRLGHGNT---- 4371
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
+ V+R K +A + G KI +A G
Sbjct: 4372 -------------DHVRRPKKVAALQ-----------------------GKKIISIATGS 4395
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
H + SD G+V+ WG EGQLG G+ + + P L+ L+
Sbjct: 4396 LHCVACSDAGEVFTWGDNDEGQLGDGT-VSAIQRPRLVQSLQ 4436
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + G + TWG G+ + +H P+ +V A G AHC++
Sbjct: 775 GSQFSVALTREGTVYTWGKGHG-GRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLA 833
Query: 119 VTEAGEVYTWG---WRECVPSAKVTRD 142
+T +GE+Y WG +++ P VTRD
Sbjct: 834 LTASGELYGWGRNDFQQICPEC-VTRD 859
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 85/213 (39%), Gaps = 43/213 (20%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK--HGETPEPFPLPTEASVVK 108
+ V G CG ++ A + SG+L TWG T G+ HG + + + +PT + +K
Sbjct: 661 RQVTGVFCGSSYSAAITASGELYTWGRG--------TYGRLGHGNSEDKY-VPTLVTALK 711
Query: 109 A--------AAGWAHCVSVTEAGEVYTW--------GWRECV-PSAKVTRDFGSAGSFQK 151
A G AH + VTEAG + W G CV S V D A K
Sbjct: 712 AHRVVHVALGCGDAHSLCVTEAGLAFAWGDGDFGKLGNESCVGTSVPVQVDLPQASCVVK 771
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
+G Q ++ R G V K R G+ + P +V G
Sbjct: 772 VFSGSQFSVAL-------TREG-TVYTWGKGHGGR-----LGHGNSEHSPVPKMVQALEG 818
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
KI +A G H L L+ G+++GWG Q+
Sbjct: 819 KKIVDLAVGLAHCLALTASGELYGWGRNDFQQI 851
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 29/110 (26%)
Query: 214 ITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKD 270
I ++AA GRH L L+ G V+ WG G G+LG G + K +PT A+ D
Sbjct: 609 IVQLAAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPT--------RIAALAD 660
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
R V + CG +SA +T +G L T+G G YG+
Sbjct: 661 RQ------------------VTGVFCGSSYSAAITASGELYTWGRGTYGR 692
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
G K+ VA G H L ++D GQV+ WG GQ G G+ I
Sbjct: 3324 GKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTI 3363
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 81/224 (36%), Gaps = 51/224 (22%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEV++WG R+ K+ G
Sbjct: 4179 VAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIESLSGIGVVDIACGSA 4238
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
SA T Q V+ K R GD L P LV G +
Sbjct: 4239 HSACITIQG---------HVLTWGKGRYGR-----LGHGDSEDQLQPKLVEALLGYRAID 4284
Query: 217 VA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLL 274
+A +G TL ++D VW WG G G+LG G + G P+
Sbjct: 4285 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG-----------------GSDGCKVPM- 4326
Query: 275 VRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ S G V ++ CG + S +T +G++ T+G G Y
Sbjct: 4327 ----KIESLAGLG---VTKVECGSQFSVALTRSGSVYTWGKGDY 4363
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 122/323 (37%), Gaps = 76/323 (23%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT---EASVVKAAA 111
VC C + L D G S T + +P E ++V+ AA
Sbjct: 569 VCAENCVYILT--------------DSGTVLYLSHAISMTEDNYPAQVKGLECTIVQLAA 614
Query: 112 GWA--HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
H +++ +G+VY+WG + D G G D++ K+ LPT A +D
Sbjct: 615 HCEGRHVLALASSGDVYSWG----------SGDGGRLG--HGDTSAKE--LPTRIAALAD 660
Query: 170 KRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVA- 218
++ +++ E G+ P LVT ++ VA
Sbjct: 661 RQVTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVAL 720
Query: 219 -AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIP---CLEHAASGKDRPL 273
G H+L +++ G + WG G G+LG S + VP +P C+ SG +
Sbjct: 721 GCGDAHSLCVTEAGLAFAWGDGDFGKLGNESCVGTSVPVQVDLPQASCVVKVFSGSQFSV 780
Query: 274 -LVRQGSVNSSGK--AGR--------------------SYVKEIACGGRHSAVVTDAGAL 310
L R+G+V + GK GR + ++A G H +T +G L
Sbjct: 781 ALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGEL 840
Query: 311 LTFGWGL--YGQRMAKCLAGDGI 331
+GWG + Q +C+ D I
Sbjct: 841 --YGWGRNDFQQICPECVTRDPI 861
>gi|159037340|ref|YP_001536593.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157916175|gb|ABV97602.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 563
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 100/281 (35%), Gaps = 82/281 (29%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P+ L + + G G +LA + + ++ WG + GQ + + TP
Sbjct: 83 TPVTVDLPADTTITAIAAGVNGHSLAVTSASTMLAWG-FNTWGQLGDGTTTNRNTPVAVD 141
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
LPT ++ AAG +H ++VT AG + WG SAG
Sbjct: 142 LPTGTTITAIAAGKSHSLAVTSAGTMLAWG-------------LNSAGQL---------- 178
Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
G+ R T P V L G IT +AA
Sbjct: 179 -------------GDGTTTNRNT--------------------PVAVDLPTGTTITAIAA 205
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
G H+L L+ G + WG GQLG G+ ++ P+ V +
Sbjct: 206 GNGHSLALTSAGTMLAWGENTWGQLGDGTTTN-----------------RNTPVTVDLPT 248
Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ + +A GG HS VT G +L +G+ +GQ
Sbjct: 249 --------GTTITALAGGGGHSLAVTSTGTMLAWGFNFWGQ 281
>gi|281349737|gb|EFB25321.1| hypothetical protein PANDA_007753 [Ailuropoda melanoleuca]
Length = 527
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 96/238 (40%), Gaps = 42/238 (17%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL K C G G LAT+E G++ TWG S L +G P
Sbjct: 65 PRRLDSLSGKKIACLSYGSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCH 120
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V + A G H + +T GEV+ WG+ ++G ST
Sbjct: 121 ISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTAN 167
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--------------ASGDEFFTLS 202
Q +P + + + S A + +SG++ +
Sbjct: 168 Q-PIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQ---PT 223
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
PC + G+++ +VA G HTL+L+D GQV+ WG GQLG G++ P P ++
Sbjct: 224 PCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVIV 281
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K +T+VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 116 LVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 174
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 175 TGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 234
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 235 VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 264
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K CG ++A +G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 57 GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 111
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 112 -TNHGLVPC---------------HISTNLSNKQ----VTEVACGSYHSLVLTSDGEVFA 151
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 152 WGYNNSGQ 159
>gi|55730398|emb|CAH91921.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 92/231 (39%), Gaps = 34/231 (14%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL + K C G G LAT+E G++ TWG S L +G P
Sbjct: 65 PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 120
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG + ++G ST
Sbjct: 121 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTVN 167
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLV 206
Q +K + + + E G+ +PC V
Sbjct: 168 QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRV 227
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 228 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 278
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 116 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 174
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 175 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 234
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 235 VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 264
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 57 GDVRSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 111
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 112 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 151
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 152 WGYNNSGQ 159
>gi|426375449|ref|XP_004054551.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 2
[Gorilla gorilla gorilla]
Length = 527
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 92/231 (39%), Gaps = 34/231 (14%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL + K C G G LAT+E G++ TWG S L +G P
Sbjct: 65 PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 120
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG + ++G ST
Sbjct: 121 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTVN 167
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLV 206
Q +K + + + E G+ +PC V
Sbjct: 168 QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRV 227
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 228 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 278
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 116 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 174
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 175 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 234
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 235 VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 264
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 57 GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 111
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 112 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 151
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 152 WGYNNSGQ 159
>gi|47226892|emb|CAG05784.1| unnamed protein product [Tetraodon nigroviridis]
Length = 557
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 31/200 (15%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVT 120
L +E G+L WG G S L +G + P + V + A G H +++T
Sbjct: 103 LLATEDGELFAWGH---NGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALT 159
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
++GEVY WG+ C G GS ST Q P + R +V +
Sbjct: 160 DSGEVYAWGYNNC----------GQVGS---GSTANQPT-PRRVSSCLQNRVAVSIVCGQ 205
Query: 181 KTSSAREESE-----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
+S A ++ G+ L+PC + G+ + ++ +G H+L L+D
Sbjct: 206 TSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLVALQGLCVQQIVSGYAHSLALTD 265
Query: 230 MGQVWGWGYGGEGQLGLGSR 249
G ++ WG GQLG G++
Sbjct: 266 EGLLYAWGANTYGQLGTGNK 285
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 71/150 (47%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNP-GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
++P LV+ N K+T+VA G H++ L+D G+V+ WGY GQ+G GS PTP +
Sbjct: 131 VAPVLVSANLLNKKVTEVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQ-PTPRRV 189
Query: 260 -PCLEHAAS-----GKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
CL++ + G+ L +V G V N +G+ G
Sbjct: 190 SSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLVALQGLC 249
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V++I G HS +TD G L +G YGQ
Sbjct: 250 VQQIVSGYAHSLALTDEGLLYAWGANTYGQ 279
>gi|74140640|dbj|BAB27358.3| unnamed protein product [Mus musculus]
Length = 576
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 70/153 (45%), Gaps = 31/153 (20%)
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG--SRIKMVP-- 254
+ P + G+KI +V+ G H+L LS+ G V+ WG EGQLGLG SR + +P
Sbjct: 41 ISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQK 100
Query: 255 --TPHLIPCLEHAASGKDRPLLVRQGS-----VNSSGKAGRS--YVKE------------ 293
+ IP + AA G L G+ N SG+ S VKE
Sbjct: 101 VKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALK 160
Query: 294 ------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
I+CG H+AV+T+ G + TFG GQ
Sbjct: 161 NLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQ 193
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 26/105 (24%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+ + V+ G H++ + G+V+ WG G EGQLG+G ++ P I L
Sbjct: 1 MHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL--------- 51
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
AG + +++CG HS +++ G + F WG
Sbjct: 52 --------------AGIKII-QVSCGHYHSLALSEDGHV--FSWG 79
>gi|207080016|ref|NP_001128757.1| RCC1 and BTB domain-containing protein 2 isoform 2 [Pongo abelii]
gi|55726291|emb|CAH89917.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 92/231 (39%), Gaps = 34/231 (14%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL + K C G G LAT+E G++ TWG S L +G P
Sbjct: 65 PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 120
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG + ++G ST
Sbjct: 121 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTVN 167
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLV 206
Q +K + + + E G+ +PC V
Sbjct: 168 QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRV 227
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 228 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 278
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 116 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 174
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 175 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 234
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 235 VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 264
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 57 GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 111
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 112 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 151
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 152 WGYNNSGQ 159
>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
Length = 2660
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R+ DR
Sbjct: 1884 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSY-----------------DR 1926
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P LV + S V +IACG HSA +T +G +LT+G G YG+
Sbjct: 1927 PKLVEHLNGMS--------VADIACGSAHSAAITASGHVLTWGKGRYGR 1967
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R + D+
Sbjct: 819 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL-----------------DK 861
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P LV ++++ACG HSA ++ G L T+G G YG+
Sbjct: 862 PRLVEALRAKK--------IRDVACGSSHSAAISSQGELYTWGLGEYGR 902
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
G F+LA + +G++ TWG D Y G +H P+P V+ A G
Sbjct: 985 GAQFSLALTRAGEVWTWGKGD-----YYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGAL 1039
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+AG+VY WG
Sbjct: 1040 HCLAVTDAGQVYAWG 1054
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 79/222 (35%), Gaps = 66/222 (29%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
L G + CG G L ++ + +WG D Y G+ G P E+
Sbjct: 1985 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKLPYKIESL 2039
Query: 105 ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
VVK G V++T++G VYTWG G F + G
Sbjct: 2040 AGLGVVKVECGSQFSVALTKSGAVYTWG----------------KGDFHRLGHGSV---- 2079
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
+ V+R K +A + G KI +A G
Sbjct: 2080 -------------DHVRRPKKVAALQ-----------------------GKKIISIATGS 2103
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
H + SD G+V+ WG EGQLG G+ + + P L+ L+
Sbjct: 2104 LHCVACSDSGEVYTWGDNDEGQLGDGT-VTAIQRPRLVAALQ 2144
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 116/309 (37%), Gaps = 62/309 (20%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAA---G 112
GG S+ GK+ G + L G P P LP VVK A G
Sbjct: 771 AGGSKSLFIVSQDGKVYACGEGTN---GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSG 827
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H +++T G+V++WG E G G + + K + +A K+
Sbjct: 828 GKHALALTLDGKVFSWGEGE----------DGKLGHGNRTTLDKPRLVEALRA----KKI 873
Query: 173 GEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
+ +++ + E GD L P LVT G ++ +VA G R
Sbjct: 874 RDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALAGRRVVQVACGSR 933
Query: 223 --HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDRPL-L 274
TL L++ G V+ WG G G+LG G + TPH I L G L L
Sbjct: 934 DAQTLALTEDGAVFSWGDGDFGKLGRGGS-EGSDTPHEIERLSGIGVVQIECGAQFSLAL 992
Query: 275 VRQGSVNSSGK--------AGRSYVKE--------------IACGGRHSAVVTDAGALLT 312
R G V + GK G +V++ +A G H VTDAG +
Sbjct: 993 TRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYA 1052
Query: 313 FGWGLYGQR 321
+G +GQ+
Sbjct: 1053 WGDNDHGQQ 1061
>gi|449447436|ref|XP_004141474.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Cucumis sativus]
Length = 472
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 93/245 (37%), Gaps = 55/245 (22%)
Query: 95 PEPFPLPTEASV--VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
P+ F P E + + A G H +V G ++TWG DFG G D
Sbjct: 49 PDLFGCPGEINSRWLDIACGREHTAAVASDGSLFTWG----------ANDFGQLG----D 94
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLV------ 206
T ++S LP + + T++ E EN TLS C +
Sbjct: 95 GTEEKSKLPKKVNQLQGEFVKSVSCGAHCTAAIAEPRENDG------TLSTCRLWIWGQN 148
Query: 207 -----------TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
P I +V+ G H + LSD GQ+ WGY GQLG G + +
Sbjct: 149 QGSNFPRLFWGAFTPQTIIRQVSCGAVHVVALSDDGQLQAWGYNEYGQLGRGVTSEGLQG 208
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
+I A + P LV + +++CG HSA +++ G + T+G
Sbjct: 209 ARIINAF--AKFLDEAPELVT--------------ITKVSCGEYHSAAISENGEVYTWGL 252
Query: 316 GLYGQ 320
G GQ
Sbjct: 253 GSMGQ 257
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 134/352 (38%), Gaps = 91/352 (25%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALA-------TSESGKLITWG 76
+G L + EKS + P G+ K V CG C A+A T + +L WG
Sbjct: 89 FGQLGDGTEEKSKL--PKKVNQLQGEFVKSVSCGAHCTAAIAEPRENDGTLSTCRLWIWG 146
Query: 77 SADDEGQSYLTSGKHGETPEPF--PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
++G ++ P F + + + + G H V++++ G++ WG+ E
Sbjct: 147 Q--NQGSNF---------PRLFWGAFTPQTIIRQVSCGAVHVVALSDDGQLQAWGYNE-- 193
Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS 194
++ R S G Q A ++AP E+V K S S +
Sbjct: 194 -YGQLGRGVTSEG-LQGARIINAFAKFLDEAP--------ELVTITKVSCGEYHSAAISE 243
Query: 195 GDEFFT--------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
E +T L P V G+ + +A GG HT ++ G ++
Sbjct: 244 NGEVYTWGLGSMGQLGHCSLQSADKELIPRRVVALDGICVKDIACGGVHTCAITQNGSLY 303
Query: 235 GWGYGGEG------QLGLGSRI--------KMVPTPHLIPCLEHAASGKDRPLL-VRQGS 279
WG G G Q G S I + +P + ++H A G L+ + G
Sbjct: 304 AWGGGQVGQLGVGPQTGFFSCIAGDSETFLRNLPVVVVSDGVQHVACGHSHTLVSTKDGR 363
Query: 280 V-----NSSGKAGR---SY-------------VKEIACGGRHSAVVTDAGAL 310
+ NS G+A +Y V+++A GG HSAV+TDA +L
Sbjct: 364 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 415
>gi|395861750|ref|XP_003803141.1| PREDICTED: RCC1 domain-containing protein 1 [Otolemur garnettii]
Length = 376
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 43/199 (21%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL +G++ +WG G+HG+ EP P EA + +
Sbjct: 166 GAEHALLLGWAGQVFSWGG-----------GRHGQLGHGSLEAEPEPRLLEALQGLPMAE 214
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V V+E G+VY WGW E A TR +L ++AP +
Sbjct: 215 VAAGGWHSVCVSETGDVYVWGWNESGQLALPTR-----------------SLAEDRAPAA 257
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSP--CLVTLNPGVKITKVAAGGRHTLI 226
+ G + +A E PA F ++ P L+ L G K + G RHT +
Sbjct: 258 VEATGLNKDESEVKRAAVGEDGAPAP---FISIQPFPALLDLPLGSDAAKASCGSRHTAV 314
Query: 227 LSDMGQVWGWGYGGEGQLG 245
++ G+++ WG+G GQLG
Sbjct: 315 VTRTGELYTWGWGKYGQLG 333
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 65/131 (49%), Gaps = 13/131 (9%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPC 261
P L+ G+ + +VAAGG H++ +S+ G V+ WG+ GQL L +R + P +
Sbjct: 201 PRLLEALQGLPMAEVAAGGWHSVCVSETGDVYVWGWNESGQLALPTRSLAEDRAPAAVEA 260
Query: 262 ---------LEHAASGKD---RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA 309
++ AA G+D P + Q S + +CG RH+AVVT G
Sbjct: 261 TGLNKDESEVKRAAVGEDGAPAPFISIQPFPALLDLPLGSDAAKASCGSRHTAVVTRTGE 320
Query: 310 LLTFGWGLYGQ 320
L T+GWG YGQ
Sbjct: 321 LYTWGWGKYGQ 331
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 51/118 (43%), Gaps = 25/118 (21%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P TL P + ++ G H L+L GQV+ WG G GQLG GS ++ P P L+ L
Sbjct: 149 PFYRTLAPELLARRLELGAEHALLLGWAGQVFSWGGGRHGQLGHGS-LEAEPEPRLLEAL 207
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ + E+A GG HS V++ G + +GW GQ
Sbjct: 208 QGLP------------------------MAEVAAGGWHSVCVSETGDVYVWGWNESGQ 241
>gi|332841362|ref|XP_003314204.1| PREDICTED: RCC1 and BTB domain-containing protein 2, partial [Pan
troglodytes]
Length = 552
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 92/231 (39%), Gaps = 34/231 (14%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL + K C G G LAT+E G++ TWG S L +G P
Sbjct: 92 PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 147
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG + ++G ST
Sbjct: 148 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTVN 194
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLV 206
Q +K + + + E G+ +PC V
Sbjct: 195 QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRV 254
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 255 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 305
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 143 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 201
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 202 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 261
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 262 VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 291
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 176 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 234
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 235 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 285
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 84 GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 138
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 139 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 178
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 179 WGYNNSGQ 186
>gi|393202066|ref|YP_006463908.1| alpha-tubulin suppressor [Solibacillus silvestris StLB046]
gi|327441397|dbj|BAK17762.1| alpha-tubulin suppressor [Solibacillus silvestris StLB046]
Length = 797
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 122/313 (38%), Gaps = 65/313 (20%)
Query: 44 ARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPT 102
A G + +DV G + E G + WG SY G +G T P P+
Sbjct: 28 AEAYGVTNHEDVVDVGKNHFIVLKEDGSVWGWGD-----HSYGQLGANGSNTSSPIPIQK 82
Query: 103 E-----ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
++ AAG H V++ GEV+TWG + + + +A SF
Sbjct: 83 ADGNRLLNIKAIAAGSNHTVALDRNGEVWTWG-----RNNQGQLGYTTANSF-------- 129
Query: 158 SALPTEQAPPSDK----RAGEEVVKRRKTSSAREESENPASGDEFF-----TLSPCLVTL 208
S LP + + K AGE T + E + A G + +P L +
Sbjct: 130 SNLPAKVTGITSKIIAISAGE-----YHTLAVDENGQVWAWGRNDYGQIGTDCNPALAHV 184
Query: 209 NP-GVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH-- 264
GV I VAAG H++ L G VW WG GQLG G + P +P L +
Sbjct: 185 QVCGVSGIIAVAAGDNHSVALKSDGTVWAWGRNTVGQLGNGETTDINTNPTAVPGLSNIV 244
Query: 265 -AASGKDRPLLVRQGS-------VNSSGKA---------------GRSYVKEIACGGRHS 301
++G + L ++Q S NSSG+ G + VK IA G HS
Sbjct: 245 DISAGANHTLALKQDSTSIYAWGFNSSGQLGDGGLESKLRPIQVEGMNKVKTIAAGNNHS 304
Query: 302 AVVTDAGALLTFG 314
+ + G + T+G
Sbjct: 305 IAIKEDGTVWTWG 317
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 49/138 (35%), Gaps = 29/138 (21%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP-------HLIPCLEHAASGK 269
V G H ++L + G VWGWG GQLG P P L+ AA
Sbjct: 40 VDVGKNHFIVLKEDGSVWGWGDHSYGQLGANGSNTSSPIPIQKADGNRLLNIKAIAAGSN 99
Query: 270 DRPLLVRQGSV-----NSSGKAGR-----------------SYVKEIACGGRHSAVVTDA 307
L R G V N+ G+ G S + I+ G H+ V +
Sbjct: 100 HTVALDRNGEVWTWGRNNQGQLGYTTANSFSNLPAKVTGITSKIIAISAGEYHTLAVDEN 159
Query: 308 GALLTFGWGLYGQRMAKC 325
G + +G YGQ C
Sbjct: 160 GQVWAWGRNDYGQIGTDC 177
>gi|326664251|ref|XP_688463.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
Length = 992
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 25/110 (22%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G+ + +++AGG H+ +LS G V+GWG GQLGLG T +P +
Sbjct: 170 GIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLGD-----TTDRFVPTV-------- 216
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
VNS R + I+CGG H+A + G + TFG G +GQ
Sbjct: 217 ---------VNS---LKRKKIVSISCGGEHTAALAKGGTVFTFGSGGFGQ 254
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 104/289 (35%), Gaps = 53/289 (18%)
Query: 45 RLCGGDSWKDVCGGGCGFALATSESGKLITWGS----ADDEGQSYLTSGKHGETPEPFPL 100
RL G DS +D G + +LI G D+G L K E P
Sbjct: 59 RLRGKDSDQD---GKLKHLQLKKNTIRLIVCGEYGAVLLDDGGKVLIMDKSTECS-PLKG 114
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
V++ A G H +++T G+++ WG G G +K+ G QS
Sbjct: 115 LENRQVIQIACGDQHSMALTNDGQLFVWG----------ENALGQLG-LRKEQAGTQSPR 163
Query: 161 PTEQ---APPSDKRAGEEVVKRRKTSSAR-----EESENPASGDEFFTLSPCLVTLNPGV 212
+ P + AG S + GD P +V
Sbjct: 164 HLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRK 223
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
KI ++ GG HT L+ G V+ +G GG GQLG ++ + P
Sbjct: 224 KIVSISCGGEHTAALAKGGTVFTFGSGGFGQLG-----------------HNSFKDEHHP 266
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL-TFGWGLYGQ 320
LV + S V ++ CG H+ V T + L+ +FG G+ GQ
Sbjct: 267 RLV--------AELWGSKVSQVTCGRNHTLVSTASPKLIYSFGCGMQGQ 307
>gi|301767480|ref|XP_002919156.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
[Ailuropoda melanoleuca]
Length = 551
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 96/238 (40%), Gaps = 42/238 (17%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL K C G G LAT+E G++ TWG S L +G P
Sbjct: 89 PRRLDSLSGKKIACLSYGSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCH 144
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V + A G H + +T GEV+ WG+ ++G ST
Sbjct: 145 ISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTAN 191
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--------------ASGDEFFTLS 202
Q +P + + + S A + +SG++ +
Sbjct: 192 Q-PIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQ---PT 247
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
PC + G+++ +VA G HTL+L+D GQV+ WG GQLG G++ P P ++
Sbjct: 248 PCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVIV 305
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K +T+VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 140 LVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 258
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 259 VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 288
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K CG ++A +G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VTEVACGSYHSLVLTSDGEVFA 175
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 176 WGYNNSGQ 183
>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
Length = 5077
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R+ DR
Sbjct: 4301 VKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSY-----------------DR 4343
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P LV + S V +IACG HSA +T +G +LT+G G YG+
Sbjct: 4344 PKLVEHLNGMS--------VADIACGSAHSAAITASGHVLTWGKGRYGR 4384
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 27/110 (24%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R S D+
Sbjct: 3148 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNR-----------------STLDK 3190
Query: 272 PLLVRQGSVNSSGKAGRS-YVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P LV +A R+ +++IACG HSA ++ G L T+G G YG+
Sbjct: 3191 PRLV---------EALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGR 3231
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
G F+LA + +G++ TWG D Y G +H P+P V+ A G
Sbjct: 3314 GAQFSLALTRAGEVWTWGKGD-----YYRLGHGGDQHVRKPQPIAGLRGHRVIHVAVGAL 3368
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+AG+VY WG
Sbjct: 3369 HCLAVTDAGQVYAWG 3383
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 79/222 (35%), Gaps = 66/222 (29%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
L G + CG G L ++ + +WG D Y G+ G P E+
Sbjct: 4402 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKLPYKIESL 4456
Query: 105 ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
V+K G V++T++G VYTWG G F + G
Sbjct: 4457 AGLGVIKVECGSQFSVALTKSGAVYTWG----------------KGDFHRLGHG------ 4494
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
E V+R K +A + G KI +A G
Sbjct: 4495 -----------SVEHVRRPKKVAALQ-----------------------GKKIISIATGS 4520
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
H + SD G+V+ WG EGQLG G+ + + P L+ L+
Sbjct: 4521 LHCVACSDAGEVFTWGDNDEGQLGDGT-VTAIQRPRLVAALQ 4561
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 123/344 (35%), Gaps = 87/344 (25%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
S K P SP +RL GG S+ GK+ G + L G
Sbjct: 3080 SKVKVPTFSPTISRL-----RPIHIAGGSKSLFVVSQDGKVYACGEGTN---GRLGLGVT 3131
Query: 92 GETPEPFPLPT-EASVVKAAA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
P P LP VVK A G H +++T G+V++WG G
Sbjct: 3132 HNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWG----------------EG 3175
Query: 148 SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS------------- 194
K G +S L DK E ++ +K S + A+
Sbjct: 3176 EDGKLGHGNRSTL--------DKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLG 3227
Query: 195 -------GDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGYGGEGQLG 245
GD L P LV G ++ +VA G R TL L++ G V+ WG G G+LG
Sbjct: 3228 EYGRLGHGDNATQLKPKLVAALSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG 3287
Query: 246 LGSRIKMVPTPHLIPCLE-----HAASGKDRPL-LVRQGSVNSSGK--------AGRSYV 291
G + TPH I L G L L R G V + GK G +V
Sbjct: 3288 RGGS-EGSSTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV 3346
Query: 292 KE--------------IACGGRHSAVVTDAGALLTFGWGLYGQR 321
++ +A G H VTDAG + +G +GQ+
Sbjct: 3347 RKPQPIAGLRGHRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQ 3390
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHC 116
G F+LA S G+L +WG A G + G P +V A G AHC
Sbjct: 808 AGAQFSLALSCEGQLYSWGKASCLGHQLVERNVQGCSVPRLITGLQHKRIVDVAVGVAHC 867
Query: 117 VSVTEAGEVYTWG 129
++++ +GE++ WG
Sbjct: 868 LALSSSGEIFGWG 880
>gi|356526548|ref|XP_003531879.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
Length = 474
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 139/327 (42%), Gaps = 69/327 (21%)
Query: 18 KETVVYMWGY----LPGTSPEKSPILSP--IPARLCG-----GDSWKDVCGGGCG--FAL 64
+++ +Y+WGY G ++ + P +P L G W DV CG
Sbjct: 17 RKSAIYVWGYNQSGQTGRKGKEDQLRIPKQLPPELFGCPAGTNACWLDV---ACGREHTA 73
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC-VSVTEAG 123
A + G L TWG A+D GQ + + + PE E+ VK+ + AHC + E
Sbjct: 74 AIASDGSLFTWG-ANDFGQLGDGTEERRKHPEKVK-QLESEFVKSVSCGAHCSACIAEPR 131
Query: 124 E---------VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ-SALPTEQAPPSDKRAG 173
E ++ WG + + + R F G+F+ ++ ++ S SD+
Sbjct: 132 ENDGSISTRRLWVWGQNQ---GSNLPRLF--WGAFKPNTIIREVSCGAVHVVALSDEGLL 186
Query: 174 EE-------VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
+ + R T + + +S +F +P LV KI KV+ G HT
Sbjct: 187 QAWGYNECGQLGRGVTCEGLQGAHIISSYAKFLDEAPELV------KIAKVSCGEYHTAA 240
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
+SD G+V+ WG G GQLG S L++ D+ LL R+ V G
Sbjct: 241 ISDKGEVYTWGLGNMGQLGHSS-------------LQYG----DKELLPRR-VVTLDG-- 280
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTF 313
++K++ACGG H+ +T GAL T+
Sbjct: 281 --IFIKDVACGGVHTCALTQGGALYTW 305
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 96/244 (39%), Gaps = 53/244 (21%)
Query: 95 PEPFPLP--TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
PE F P T A + A G H ++ G ++TWG DFG G D
Sbjct: 49 PELFGCPAGTNACWLDVACGREHTAAIASDGSLFTWG----------ANDFGQLG----D 94
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKR-----RKTSSAREESENPAS---------GDEF 198
T ++ + P K+ E VK ++ E EN S G
Sbjct: 95 GTEER-----RKHPEKVKQLESEFVKSVSCGAHCSACIAEPRENDGSISTRRLWVWGQNQ 149
Query: 199 FTLSPCLV--TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
+ P L P I +V+ G H + LSD G + WGY GQLG G + +
Sbjct: 150 GSNLPRLFWGAFKPNTIIREVSCGAVHVVALSDEGLLQAWGYNECGQLGRGVTCEGLQGA 209
Query: 257 HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
H+I +A + P LV+ + +++CG H+A ++D G + T+G G
Sbjct: 210 HIIS--SYAKFLDEAPELVK--------------IAKVSCGEYHTAAISDKGEVYTWGLG 253
Query: 317 LYGQ 320
GQ
Sbjct: 254 NMGQ 257
>gi|344284964|ref|XP_003414234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Loxodonta
africana]
Length = 1018
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 65/153 (42%), Gaps = 31/153 (20%)
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
+P V G+KI +V+ G H+L LS GQV+ WG GQLGLG +P
Sbjct: 113 LNFTPMKVKALAGIKIIQVSCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQR 172
Query: 259 ------IPCLEHAASGKDRPLLVRQGS-----VNSSGKAG--------RSY--------- 290
IP + AA G L G+ N++G+ +SY
Sbjct: 173 VKSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALK 232
Query: 291 ---VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V I+CG H+AV+T G + TFG GQ
Sbjct: 233 ELGVVYISCGSEHTAVLTQDGKVFTFGDNSSGQ 265
>gi|330796442|ref|XP_003286276.1| hypothetical protein DICPUDRAFT_17436 [Dictyostelium purpureum]
gi|325083781|gb|EGC37225.1| hypothetical protein DICPUDRAFT_17436 [Dictyostelium purpureum]
Length = 423
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 22/108 (20%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
I KV +G H+L+L+ G V+ WG+G G GLG + V TP I
Sbjct: 192 NIKKVCSGSDHSLVLNKDGTVYSWGHGYFGATGLGKK-DNVATPTKIQF----------- 239
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ + V +IACGG HS ++T + +FGWG YGQ
Sbjct: 240 ----------NKELENKLVLDIACGGYHSLILTSDNEIYSFGWGEYGQ 277
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 79/207 (38%), Gaps = 29/207 (14%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKA 109
K VC G +L ++ G + +WG G + L + TP E V+
Sbjct: 194 KKVCSG-SDHSLVLNKDGTVYSWGHGY-FGATGLGKKDNVATPTKIQFNKELENKLVLDI 251
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H + +T E+Y++GW E +G G + D+ S E S
Sbjct: 252 ACGGYHSLILTSDNEIYSFGWGE----------YGQLGHSENDTKNYYSPKKIESINSST 301
Query: 170 KRAGEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVA 218
K TS +E + S GD P V +K K+A
Sbjct: 302 K-IKSVFAGSHATSFYVDEKGDVYSWGWGEGGTLGFGDNQNVYVPTQVKSLSNIK--KIA 358
Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLG 245
AG +HTL L++ QV+ +G GQLG
Sbjct: 359 AGFKHTLALTNDNQVYVFGDNTFGQLG 385
>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 4834
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 29/122 (23%)
Query: 202 SPC-LVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
+PC L +LN V I KVA +GG+H + L+ G+V+ WG G +G+LG +R+ +
Sbjct: 3060 TPCQLTSLNQYV-IKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSL------ 3112
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
DRP ++ + K+ R +++IACG HSA ++ G L T+G G Y
Sbjct: 3113 -----------DRPKMIE------ALKSKR--IRDIACGSSHSAAISSTGELFTWGLGEY 3153
Query: 319 GQ 320
G+
Sbjct: 3154 GR 3155
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 27/122 (22%)
Query: 201 LSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
L+P L+ + I KVA +GG+H L LS G+V+ WG G +G+LG G++
Sbjct: 4042 LTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNK--------- 4092
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+G D P L+ G+ V +IACGG HSA VT G + T+G G Y
Sbjct: 4093 --------NGCDHPQLI-------DALQGKEIV-DIACGGAHSAAVTAGGEIYTWGKGRY 4136
Query: 319 GQ 320
G+
Sbjct: 4137 GR 4138
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVK 108
VC CG F+LA ++ G++ TWG D Y G +H P +E +V
Sbjct: 3232 VCMIECGAQFSLALTKFGQVYTWGKGD-----YFRLGHGSDQHVRKPTLVESLSEKKIVH 3286
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC+ T+ G+VY WG
Sbjct: 3287 VAVGALHCLCATDQGQVYAWG 3307
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 87/250 (34%), Gaps = 90/250 (36%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G P+ E+ VVK
Sbjct: 4166 CGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKIPMKIESLAGLGVVKVEC 4220
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G V++T +G VYTWG G + + G
Sbjct: 4221 GSQFSVALTRSGSVYTWG----------------KGDYHRLGHG---------------- 4248
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+E V+ K +A + G KI +A G H + SD+G
Sbjct: 4249 -SDEHVRHPKKIAALQ-----------------------GKKIICIATGSLHCVACSDLG 4284
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
+V+ WG EGQLG G+ + + P L+ L+ GK+ +
Sbjct: 4285 EVFTWGDNDEGQLGDGT-MNAIHRPRLVVTLQ----GKN--------------------I 4319
Query: 292 KEIACGGRHS 301
+ACG HS
Sbjct: 4320 NRVACGSAHS 4329
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 27/112 (24%)
Query: 211 GVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
G +I+K+AA G+H+L LS G V+ WG G G+LG G +
Sbjct: 518 GKEISKLAAHADGKHSLALSCDGDVYSWGNGDGGRLGHGDN-----------------NS 560
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+D+P + + G++ + I+CG +SA VT +G + T+G G YG+
Sbjct: 561 RDQPTKITE-------LVGKNVI-HISCGATYSAAVTSSGEVYTWGRGNYGR 604
Score = 44.3 bits (103), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 93/230 (40%), Gaps = 40/230 (17%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPT------E 103
K+V CG ++ A + SG++ TWG + G+ G T E +PT +
Sbjct: 573 KNVIHISCGATYSAAVTSSGEVYTWGRGN--------YGRLGHGTSEDHTVPTLVVGLKD 624
Query: 104 ASVVKAA--AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
+V A +G A ++VT G V++WG D G S G ++
Sbjct: 625 YFIVDIACGSGDAQTLAVTNTGLVFSWG------------DGGYGKLGTGGSDGSKTPKL 672
Query: 162 TEQAPPSDKR----AGEEVVKRRKTSSA----REESENPASGDEFFTLSPCLVTLNPGVK 213
E+ + + + K+ S + ++ G E P LV G
Sbjct: 673 IEKLQDIEVARVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEGLNGKC 732
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I KVA G H L L+D G+V+GWG GQ+G S V P L+ L+
Sbjct: 733 IKKVAVGSGHVLALTDDGEVYGWGRNDNGQVGETSETN-VSEPTLLTLLQ 781
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
LA S GK+ +WG DD + K+G + P+ +V A G AH +VT
Sbjct: 4068 LALSTDGKVYSWGEGDDGKLGH--GNKNGCDHPQLIDALQGKEIVDIACGGAHSAAVTAG 4125
Query: 123 GEVYTWG 129
GE+YTWG
Sbjct: 4126 GEIYTWG 4132
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P LV KI VA G H L +D GQV+ WG GQ G G+ I + P L+ L
Sbjct: 3273 PTLVESLSEKKIVHVAVGALHCLCATDQGQVYAWGDNDHGQQGNGT-ILVNRKPSLVLNL 3331
Query: 263 E 263
E
Sbjct: 3332 E 3332
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 52/126 (41%), Gaps = 27/126 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
GD L P LV G I +VA G R TL LS G V+ WG G G+LG G
Sbjct: 3159 GDNLTQLRPKLVKALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGKLGRG----- 3213
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
+ G D P + + +N G V I CG + S +T G + T
Sbjct: 3214 ------------GSEGCDIPHNIER--LNGLG------VCMIECGAQFSLALTKFGQVYT 3253
Query: 313 FGWGLY 318
+G G Y
Sbjct: 3254 WGKGDY 3259
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 25/104 (24%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+I +A G H+ +S G+++ WG G G+LG G + + RP
Sbjct: 3125 RIRDIACGSSHSAAISSTGELFTWGLGEYGRLGHGDNLTQL-----------------RP 3167
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
LV+ G ++ ++ACG R + + + L F WG
Sbjct: 3168 KLVK-------ALLGH-HIVQVACGSRDAQTLALSAEGLVFSWG 3203
>gi|345325115|ref|XP_001514077.2| PREDICTED: RCC1 and BTB domain-containing protein 2
[Ornithorhynchus anatinus]
Length = 721
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 93/231 (40%), Gaps = 41/231 (17%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
LCG G G +AT+E G++ TWG S L +G P + T
Sbjct: 265 LCGKKITCLSYGSGPHVVVATAE-GEVYTWGH---NAYSQLGNGTTNHGLIPCHVSTNLV 320
Query: 105 --SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
VV+ A G H + +T GEVY WG + ++G ST Q +P
Sbjct: 321 NKKVVEVACGSHHSLVLTSDGEVYAWG-------------YNNSGQVGSGSTANQP-IPR 366
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTL 208
+ + + S A ES +SG++ +PC +
Sbjct: 367 RVTSCLQNKIATNIACGQMCSMAVVESGEVYVWGYNGNGQLGLGSSGNQ---PTPCRIAA 423
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM---VPTP 256
G+++ +V G HTL+L+D GQ++ WG GQLG G++ +P P
Sbjct: 424 LQGIRVQRVTCGYAHTLVLTDEGQLYAWGANSYGQLGTGNKSNQSYPIPVP 474
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 69/150 (46%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC V+ N K+ +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 310 LIPCHVSTNLVNKKVVEVACGSHHSLVLTSDGEVYAWGYNNSGQVGSGSTANQ-PIPRRV 368
Query: 260 -PCLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 369 TSCLQNKIATNIACGQMCSMAVVESGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 428
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ + CG H+ V+TD G L +G YGQ
Sbjct: 429 VQRVTCGYAHTLVLTDEGQLYAWGANSYGQ 458
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 58/129 (44%), Gaps = 27/129 (20%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T+ P + G KIT ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 250 TGDVQNTIEPRRIDSLCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLGNGT---- 305
Query: 253 VPTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
T H LIPC S N K V E+ACG HS V+T G +
Sbjct: 306 --TNHGLIPC---------------HVSTNLVNKK----VVEVACGSHHSLVLTSDGEVY 344
Query: 312 TFGWGLYGQ 320
+G+ GQ
Sbjct: 345 AWGYNNSGQ 353
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 67/173 (38%), Gaps = 22/173 (12%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S PIP R+ K CG ++A ESG++ WG
Sbjct: 343 VYAWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIATNIACGQMCSMAVVESGEVYVWGY- 401
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
G L G G P P + V + G+AH + +T+ G++Y WG
Sbjct: 402 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVTCGYAHTLVLTDEGQLYAWG------- 452
Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
+G G+ K + +P E+ D+ TS+A+ +S
Sbjct: 453 ---ANSYGQLGTGNKSNQSYPIPVPVEK----DRIIEIAACHSAHTSAAKTQS 498
>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Amphimedon queenslandica]
Length = 599
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 107/306 (34%), Gaps = 94/306 (30%)
Query: 22 VYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGS 77
+Y+WG G +K L + L G + CGG +A + G++ +WG+
Sbjct: 164 LYLWGGGDRGRLGHKDDKPRFLPNVVESLLGQNVTMIACGGS--HTIALNSKGQVFSWGA 221
Query: 78 ADDEGQSYLTSGKHGETPEPFPLP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
Q L G + P + + +VV A H ++E G +YTWG
Sbjct: 222 GP---QGCLGHGNLRDRYSPLMIDGPLRDVNVVHVACYENHSAVISEDGNLYTWG----- 273
Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS 194
G + DS KQ+
Sbjct: 274 -------KAGPFLGYMDDSVTKQT------------------------------------ 290
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
P LV G +I +VA G HTL++ + G+V+ +G G+LG G K +
Sbjct: 291 -------KPRLVDALYGTRIVQVACGRSHTLVIDEEGRVYSFGINKFGELGQGHD-KAIT 342
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
P ++P L + +++CG HSA + + G L +G
Sbjct: 343 KPTMVPNLVS--------------------------ICKVSCGRHHSAAIDEDGVLFMWG 376
Query: 315 WGLYGQ 320
WG GQ
Sbjct: 377 WGARGQ 382
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 75/199 (37%), Gaps = 35/199 (17%)
Query: 79 DDEGQSY---------LTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
D+EG+ Y L G +P +P S+ K + G H ++ E G ++ WG
Sbjct: 317 DEEGRVYSFGINKFGELGQGHDKAITKPTMVPNLVSICKVSCGRHHSAAIDEDGVLFMWG 376
Query: 130 WRECVPSAKVTRDFGSAGSF-QKDSTGKQSALPTE---QAPPSDKRAGEEVVKRRKTS-- 183
W G+ G Q + S P P D G +
Sbjct: 377 W-------------GARGQLGQGEPKSLFSPTPVNGFNDQPLEDVSCGYGHTAAITANGV 423
Query: 184 ------SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
+A + P+S + SP + L G++ T++ G T++++ +GQ++ WG
Sbjct: 424 AYCWGDNASSQCGVPSSVYGELS-SPRGIVLPSGIRPTQINCGANFTVLVTSIGQLFTWG 482
Query: 238 YGGEGQLGLGSRIKMVPTP 256
GQLG G K P
Sbjct: 483 CNMSGQLGNGEAKKTFSQP 501
>gi|401413326|ref|XP_003886110.1| putative regulator of chromosome condensation domain-containing
protein [Neospora caninum Liverpool]
gi|325120530|emb|CBZ56084.1| putative regulator of chromosome condensation domain-containing
protein [Neospora caninum Liverpool]
Length = 717
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 82/228 (35%), Gaps = 72/228 (31%)
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
E E F T VV+ A G +HC ++TE GEVYTWG + D+G G
Sbjct: 482 EGEEAFRERTPKKVVQVACGSSHCAALTENGEVYTWG----------SDDYGQLG----- 526
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
GK+S F LSP V
Sbjct: 527 -LGKESR---------------------------------------FVLSPRRVDTLADK 546
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
K+ V G T + G+V+ WGYG +G+ G G +P LI LE G+ R
Sbjct: 547 KVVSVRCGHFFTCCTTSTGEVFVWGYGRDGECGNGRSDAALPV--LISTLEPQPGGRKR- 603
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
GR V + GG H A T+ G L +G G GQ
Sbjct: 604 --------------GRGKVVDTVAGGGHLAAWTEEGGLWMWGRGREGQ 637
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 76/211 (36%), Gaps = 62/211 (29%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEASVVKAAAGWAH 115
G A +E+G++ TWGS DD GQ L GK +P + VV G
Sbjct: 501 GSSHCAALTENGEVYTWGS-DDYGQ--LGLGKESRFVLSPRRVDTLADKKVVSVRCGHFF 557
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP----TEQAPPSDKR 171
T GEV+ WG+ RD G G+ + D +ALP T + P ++
Sbjct: 558 TCCTTSTGEVFVWGY---------GRD-GECGNGRSD-----AALPVLISTLEPQPGGRK 602
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
G K+ AGG H ++ G
Sbjct: 603 RGRG-------------------------------------KVVDTVAGGGHLAAWTEEG 625
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
+W WG G EGQLG G I+ V +P L
Sbjct: 626 GLWMWGRGREGQLGRGDAIESVAASRDVPQL 656
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 105/232 (45%), Gaps = 18/232 (7%)
Query: 104 ASVVKAAAGWAHCVSVTEAGEVYTWGWR---ECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
A VV A G H +++TE+GEVY+WG EC A+ + + + G ++ K
Sbjct: 296 ARVVAVACGEDHTLALTESGEVYSWGGNAHGEC-GRAETSDNAEAEGGGERQPARKPRRS 354
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASG---DEFFTLSPCLVTLNPGVKITKV 217
DK G+ R +S++ ++++P +G E + + G ++T++
Sbjct: 355 WLWGVIRGDKGEGDVDTSERDSSAS--DADSPWAGRTEKERGLVGGRVDGALRGKRVTQI 412
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLG-LGSRIKMVPTPHLIPCLEHAASGKDRPLLV- 275
A G + +++ G ++ WG G GQ+G S + C+ ++SG +
Sbjct: 413 ACGKHVSAAVTEEGDLYVWGEGRGGQVGPPPSPSRRSQDRKKSDCISTSSSGLSFNVRTP 472
Query: 276 RQGSVNSSGKAGRSY-------VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
R+ V + ++ V ++ACG H A +T+ G + T+G YGQ
Sbjct: 473 RKLEVYGLAEGEEAFRERTPKKVVQVACGSSHCAALTENGEVYTWGSDDYGQ 524
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 28/129 (21%)
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
L+ G I++ AAG H++ + +G+V+ WG GG+ +LG P P A S
Sbjct: 211 LHDGECISQCAAGAFHSVCCTSLGRVFTWGRGGKNRLGH-------DWPRDAP--SSAVS 261
Query: 268 GKDRPLLVRQGSVNSSGKAGRSY----------------VKEIACGGRHSAVVTDAGALL 311
D+PL + S SSG A + V +ACG H+ +T++G +
Sbjct: 262 SGDKPL---RSSTLSSGVAETAVQTLPKCVEGLWRVSARVVAVACGEDHTLALTESGEVY 318
Query: 312 TFGWGLYGQ 320
++G +G+
Sbjct: 319 SWGGNAHGE 327
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 104/295 (35%), Gaps = 70/295 (23%)
Query: 66 TSESGKLITWGSADDEGQSYLTSGKHGETPEPFP---LPTEASVVKAAAGWAHCVSVTEA 122
+S S L +WGS D S TP+ P L + + AAG H V T
Sbjct: 174 SSGSRVLYSWGSGIDGQLGLGGSILSVSTPQRVPASALHDGECISQCAAGAFHSVCCTSL 233
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
G V+TWG G D P + AP S +G++ ++
Sbjct: 234 GRVFTWG-------------RGGKNRLGHD-------WPRD-APSSAVSSGDKPLRSSTL 272
Query: 183 SSAREESENPASGDEFFTLSPCLVTL-NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
SS E+ TL C+ L ++ VA G HTL L++ G+V+ WG
Sbjct: 273 SSGVAETA-------VQTLPKCVEGLWRVSARVVAVACGEDHTLALTESGEVYSWGGNAH 325
Query: 242 GQLGLGSRIKMVPT-------PHLIPC---------------------LEHAASGKDRPL 273
G+ G P P + +AS D P
Sbjct: 326 GECGRAETSDNAEAEGGGERQPARKPRRSWLWGVIRGDKGEGDVDTSERDSSASDADSPW 385
Query: 274 LVRQ--------GSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
R G V+ + + R V +IACG SA VT+ G L +G G GQ
Sbjct: 386 AGRTEKERGLVGGRVDGALRGKR--VTQIACGKHVSAAVTEEGDLYVWGEGRGGQ 438
>gi|60097906|ref|NP_080268.1| E3 ISG15--protein ligase Herc6 [Mus musculus]
gi|403399416|sp|F2Z461.1|HERC6_MOUSE RecName: Full=E3 ISG15--protein ligase Herc6
Length = 1003
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 70/152 (46%), Gaps = 31/152 (20%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG--SRIKMVP--- 254
+ P + G+KI +V+ G H+L LS+ G V+ WG EGQLGLG SR + +P
Sbjct: 115 SFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKV 174
Query: 255 -TPHLIPCLEHAASGKDRPLLVRQGS-----VNSSGKAGRS--YVKE------------- 293
+ IP + AA G L G+ N SG+ S VKE
Sbjct: 175 KSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKN 234
Query: 294 -----IACGGRHSAVVTDAGALLTFGWGLYGQ 320
I+CG H+AV+T+ G + TFG GQ
Sbjct: 235 LSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQ 266
>gi|410208770|gb|JAA01604.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410264080|gb|JAA20006.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410293806|gb|JAA25503.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410338543|gb|JAA38218.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
Length = 555
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 92/231 (39%), Gaps = 34/231 (14%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL + K C G G LAT+E G++ TWG S L +G P
Sbjct: 89 PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 144
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG + ++G ST
Sbjct: 145 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTVN 191
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLV 206
Q +K + + + E G+ +PC V
Sbjct: 192 QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRV 251
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 198
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 258
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 259 VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 288
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 176 WGYNNSGQ 183
>gi|74204005|dbj|BAE29004.1| unnamed protein product [Mus musculus]
Length = 926
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 70/152 (46%), Gaps = 31/152 (20%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG--SRIKMVP--- 254
+ P + G+KI +V+ G H+L LS+ G V+ WG EGQLGLG SR + +P
Sbjct: 115 SFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKV 174
Query: 255 -TPHLIPCLEHAASGKDRPLLVRQGS-----VNSSGKAGRS--YVKE------------- 293
+ IP + AA G L G+ N SG+ S VKE
Sbjct: 175 KSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKN 234
Query: 294 -----IACGGRHSAVVTDAGALLTFGWGLYGQ 320
I+CG H+AV+T+ G + TFG GQ
Sbjct: 235 LSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQ 266
>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1036
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/142 (30%), Positives = 62/142 (43%), Gaps = 28/142 (19%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
V+I +VA G H+ LS GQV+ WG GQLGLG + TP + IP + +
Sbjct: 137 VQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLS 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRSYVKE-----------------IACGGRHSAV 303
A G + G+V N G+ G + K+ ++CG H+A
Sbjct: 197 AGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDRWFPALLKSLRSQRVIFVSCGEDHTAA 256
Query: 304 VTDAGALLTFGWGLYGQRMAKC 325
+T + TFG G YGQ C
Sbjct: 257 LTKLRGVFTFGAGGYGQLGHNC 278
Score = 57.4 bits (137), Expect = 9e-06, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 24/107 (22%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
I V+ G HTL L+D GQV+ WG G GQLGL + + V P I CL
Sbjct: 86 IVAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNNFEECVRVPRNIKCLSDVQ------- 138
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ ++ACG HS ++ G + ++G +GQ
Sbjct: 139 -----------------IAQVACGYWHSHALSKGGQVFSWGQNQFGQ 168
>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
Length = 5197
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 62/121 (51%), Gaps = 27/121 (22%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P LV V I KVA +GG+H L LS G+V+ WG G +G+LG G+R
Sbjct: 4452 TPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNR---------- 4501
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
DRP L+ +++ G V +IACG HSA +T G +LT+G G YG
Sbjct: 4502 -------DSYDRPKLIE--ALSGIG------VIDIACGSAHSACITSQGHVLTWGKGRYG 4546
Query: 320 Q 320
+
Sbjct: 4547 R 4547
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H + L+ G+V+ WG G +G+LG G+R+ + P LI L
Sbjct: 3328 VKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTL-EKPKLIETLR-------- 3378
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+++IACG HSA +T +G L T+G G YG+
Sbjct: 3379 ----------------TKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3411
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 118/310 (38%), Gaps = 75/310 (24%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
+P++ PILS + K G A+A + GK+ +WG +D GK
Sbjct: 3316 TPKQVPILSQYVVK-------KVAVHSGGKHAMALTLDGKVFSWGEGED--------GKL 3360
Query: 92 G-------ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
G E P+ + A G +H ++T +GE+YTWG E +G
Sbjct: 3361 GHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGE----------YG 3410
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR--KTSSAREESENPASGD-EFFTL 201
G + T + L T A D R + R +T EE + GD +F L
Sbjct: 3411 RLG-HGDNCTQLKPKLVTALA---DHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKL 3466
Query: 202 S---------PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
P V GV + ++ G + +L L+ G+VW WG G +LG G+ +
Sbjct: 3467 GRGGSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHV 3526
Query: 253 -VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
PTP G G+ + +A G H VTD+G +
Sbjct: 3527 RKPTP-------------------------IQGLRGKKVI-HVAVGALHCLAVTDSGQVY 3560
Query: 312 TFGWGLYGQR 321
+G +GQ+
Sbjct: 3561 AWGDNDHGQQ 3570
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 29/112 (25%)
Query: 212 VKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASG 268
V I ++AA GRH L L+ G V+ WG G G+LG G + K +PT ++ E +G
Sbjct: 628 VNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPT-RIVALAERQVTG 686
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ CG +SA +T AG L T+G G YG+
Sbjct: 687 -------------------------VFCGSSYSAAITAAGELYTWGRGTYGR 713
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 78/222 (35%), Gaps = 66/222 (29%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
L G + CG G L ++ + +WG D Y G+ G P+ E+
Sbjct: 4565 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKVPMKIESL 4619
Query: 105 ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
V K G V++T +G VYTWG G + + G
Sbjct: 4620 AGLGVTKVECGSQFSVALTRSGSVYTWG----------------KGDYHRLGHGNT---- 4659
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
+ V+R K +A + G KI +A G
Sbjct: 4660 -------------DHVRRPKKVAALQ-----------------------GKKIISIATGS 4683
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
H + SD G+V+ WG EGQLG G+ + + P L+ L+
Sbjct: 4684 LHCVACSDGGEVFTWGDNDEGQLGDGT-VSAIQRPRLVQSLQ 4724
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 83/225 (36%), Gaps = 45/225 (20%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPF 98
IP R+ + + V G CG ++ A + +G+L TWG T G+ G E
Sbjct: 672 IPTRIVAL-AERQVTGVFCGSSYSAAITAAGELYTWGRG--------TYGRLGHGNSEDK 722
Query: 99 PLPTEASVVKAA--------AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
LPT V+K G AH + VT+ G VY WG DFG G
Sbjct: 723 HLPTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIVYAWG----------DGDFGKLG--- 769
Query: 151 KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA-----------REESENPASGDEFF 199
+ T S++P P +V S A + G
Sbjct: 770 -NGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSVALGRDGTVYSWGKGHGGRLGHGHSEH 828
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
T SP + G I +A G H L L+ G+++GWG QL
Sbjct: 829 TASPKAIQALEGKNIVDLAVGLAHCLALTASGELYGWGRNDFQQL 873
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A G + +WG + S +H +P+ ++V A G AHC++
Sbjct: 797 GSHFSVALGRDGTVYSWGKGHGGRLGHGHS-EHTASPKAIQALEGKNIVDLAVGLAHCLA 855
Query: 119 VTEAGEVYTWGWRE----CVPSAKVTRD 142
+T +GE+Y WG + C P VTRD
Sbjct: 856 LTASGELYGWGRNDFQQLCPPC--VTRD 881
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 81/224 (36%), Gaps = 51/224 (22%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEV++WG R+ K+ G
Sbjct: 4467 VAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSA 4526
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
SA T Q V+ K R GD L P LV G +
Sbjct: 4527 HSACITSQG---------HVLTWGKGRYGR-----LGHGDSEDQLQPKLVEALLGYRAID 4572
Query: 217 VA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLL 274
+A +G TL ++D VW WG G G+LG G + G P+
Sbjct: 4573 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG-----------------GSDGCKVPM- 4614
Query: 275 VRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ S G V ++ CG + S +T +G++ T+G G Y
Sbjct: 4615 ----KIESLAGLG---VTKVECGSQFSVALTRSGSVYTWGKGDY 4651
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
G K+ VA G H L ++D GQV+ WG GQ G G+ I
Sbjct: 3537 GKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTI 3576
>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
Length = 5072
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R+ DR
Sbjct: 4323 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSY-----------------DR 4365
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P LV +N V +IACG HSA +T +G +LT+G G YG+
Sbjct: 4366 PKLVEH--LNGMN------VADIACGSAHSAAITASGHVLTWGKGRYGR 4406
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R + D+
Sbjct: 3182 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL-----------------DK 3224
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P LV ++ S ++++ACG HSA ++ G L T+G G YG+
Sbjct: 3225 PRLVE--TLRSKK------IRDVACGSSHSAAISSQGELYTWGLGEYGR 3265
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 83/217 (38%), Gaps = 31/217 (14%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
+P ++ D GC ++ A + SG L TWG +Y G +P P
Sbjct: 662 VPTKITLLDRCVKAVFCGCSYSAAITCSGNLYTWGRG-----TYARLGHGNSDDQPLPTV 716
Query: 102 ----TEASVVKAA--AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
TE ++ A +G AH + +T G VY WG D+G G+ + G
Sbjct: 717 VMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWG----------DADYGKLGN--GNLNG 764
Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS--GDEFFTLS------PCLVT 207
S + E P + T+ + S AS G + S P L++
Sbjct: 765 SMSPVLVESLPKVQRVFAGAQFSMALTTDGQLYSWGKASCLGHQLVERSAQWCSVPRLIS 824
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
+I VA G H L LS G+V+GWG Q+
Sbjct: 825 GLQHKRIVDVAVGVAHCLALSSCGEVFGWGRNDSQQI 861
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
G F+LA + +G++ TWG D Y G +H P+P V+ A G
Sbjct: 3348 GAQFSLALTRAGEVWTWGKGD-----YYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGAL 3402
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+AG+VY WG
Sbjct: 3403 HCLAVTDAGQVYAWG 3417
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 79/222 (35%), Gaps = 66/222 (29%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
L G + CG G L ++ + +WG D Y G+ G P E+
Sbjct: 4424 LLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGD-----YGKLGRGGSDGCKLPYKIESL 4478
Query: 105 ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
V+K G V++T++G VYTWG G F + G
Sbjct: 4479 AGLGVIKVECGSQFSVALTKSGAVYTWG----------------KGDFHRLGHG------ 4516
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
+ V+R K +A + G KI +A G
Sbjct: 4517 -----------SVDHVRRPKKVAALQ-----------------------GKKIISIATGS 4542
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
H + SD G+V+ WG EGQLG G+ + + P L+ L+
Sbjct: 4543 LHCVACSDSGEVYTWGDNDEGQLGDGT-VTAIQRPRLVAALQ 4583
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 116/309 (37%), Gaps = 62/309 (20%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAA---G 112
GG ++GK+ G + L G P P LP VVK A G
Sbjct: 3134 AGGSKSLFIVGQNGKVYACGEGTN---GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSG 3190
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H +++T G+V++WG E G G + + K + T ++ K+
Sbjct: 3191 GKHALALTLDGKVFSWGEGE----------DGKLGHGNRTTLDKPRLVETLRS----KKI 3236
Query: 173 GEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
+ +++ + E GD L P LV G ++ +VA G R
Sbjct: 3237 RDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNSTQLKPKLVAALAGRRVIQVACGSR 3296
Query: 223 --HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDRPL-L 274
TL L++ G V+ WG G G+LG G + TPH I L G L L
Sbjct: 3297 DAQTLALTEDGAVFSWGDGDFGKLGRGGS-EGSDTPHEIERLSGIGVIQIECGAQFSLAL 3355
Query: 275 VRQGSVNSSGK--------AGRSYVKE--------------IACGGRHSAVVTDAGALLT 312
R G V + GK G +V++ +A G H VTDAG +
Sbjct: 3356 TRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYA 3415
Query: 313 FGWGLYGQR 321
+G +GQ+
Sbjct: 3416 WGDNDHGQQ 3424
>gi|403303294|ref|XP_003942271.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Saimiri boliviensis boliviensis]
Length = 556
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 95/232 (40%), Gaps = 36/232 (15%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL K C G G LAT+E G++ TWG S L +G P
Sbjct: 94 PRRLDSLSGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 149
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG + ++G ST
Sbjct: 150 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTIN 196
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA----SGDEFFTL-------SPCL 205
Q +P + + + A +S +G+ L +PC
Sbjct: 197 Q-PIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCR 255
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
V G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 256 VAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 307
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS I P P +
Sbjct: 145 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQ-PIPRRV 203
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 204 TGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 263
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 264 VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 293
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S I PIP R+ G K V CG +A +SG++ WG
Sbjct: 178 VFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGY- 236
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 237 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 86 GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 140
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 141 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 180
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 181 WGYNNSGQ 188
>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 4784
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 62/121 (51%), Gaps = 27/121 (22%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P LV V I KVA +GG+H L LS G+V+ WG G +G+LG G+R
Sbjct: 4019 TPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNR---------- 4068
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
DRP L+ +++ G V +IACG HSA +T G +LT+G G YG
Sbjct: 4069 -------DSYDRPKLIE--ALSGIG------VVDIACGSAHSACITSQGHVLTWGKGRYG 4113
Query: 320 Q 320
+
Sbjct: 4114 R 4114
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H + L+ G+V+ WG G +G+LG G+R+ + ++
Sbjct: 2994 VKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRVTL-----------------EK 3036
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ S + R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3037 PKLLE------SLRTKR--IRDIACGSSHSAAITSSGELYTWGLGEYGR 3077
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 116/314 (36%), Gaps = 83/314 (26%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
+P + PIL+ + K G A+A + GK+ +WG +D GK
Sbjct: 2982 TPRQVPILNQYVVK-------KVAVHSGGKHAMALTLDGKVFSWGEGED--------GKL 3026
Query: 92 G-------ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
G E P+ + A G +H ++T +GE+YTWG E +G
Sbjct: 3027 GHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAITSSGELYTWGLGE----------YG 3076
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV------KRRKTSSAREESENPASGD-E 197
G + K + Q G VV + +T EE + GD +
Sbjct: 3077 RLGHGDNCTQLKPKLVTALQ--------GHRVVQVACGSRDAQTLCLTEEGLVFSWGDGD 3128
Query: 198 FFTL---------SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
F L P V GV + ++ G + +L L+ +G+VW WG G +LG G+
Sbjct: 3129 FGKLGRGGSEGCSVPHQVERLNGVGVVQIECGAQFSLALTKIGEVWTWGKGDYYRLGHGT 3188
Query: 249 RIKM-VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA 307
+ PTP G G+ + +A G H VTD+
Sbjct: 3189 DQHVRKPTP-------------------------IQGLRGKKVI-HVAVGALHCLAVTDS 3222
Query: 308 GALLTFGWGLYGQR 321
G + +G +GQ+
Sbjct: 3223 GQVFAWGDNDHGQQ 3236
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 86/206 (41%), Gaps = 38/206 (18%)
Query: 122 AGEVYTWGWRECVPSAK-VTRDFGSAGSFQKDSTGKQSALPTEQAPPS---DKRAGEEVV 177
A +++T GW C P T + +A + + + + T + PPS + A E
Sbjct: 486 AQKIFTLGWSSCSPEMYGFTSEASNASAQLLAGSVPRYSTATIELPPSLQVRQVACTENS 545
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG--GRHTLILSDMGQVWG 235
T+S + S + + + T++P LV GV + ++AA GRH + LS G+V+
Sbjct: 546 IYIVTTSGQLYSIHSSCAE---TVAPKLVEGLEGVSVIQIAAHCEGRHAMALSSAGEVYS 602
Query: 236 WGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
WG G G+LG G K VPT A V I
Sbjct: 603 WGAGEGGRLGHGDTASKEVPTK----------------------------IALEKQVTAI 634
Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQ 320
G +SA V+ G L T+G G YG+
Sbjct: 635 YAGASYSAAVSSVGELFTWGRGTYGR 660
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
SP+P ++ G S + G F++A S G L +WG G+ + +H P+
Sbjct: 723 SPLPVQIEGVSSVARIYSGS-QFSVALSYDGTLYSWGKGHG-GRLGHGNSEHSNVPKLVH 780
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WRECVPSAKVTRD 142
+V A G AHC+++T +GE+Y WG +++ PS V+RD
Sbjct: 781 ALEGKKIVDVAVGSAHCLALTSSGELYGWGRNDYQQICPSG-VSRD 825
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 103/271 (38%), Gaps = 46/271 (16%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAH 115
GG S+ GKL G + G+ L + TP P+ + V K A +G H
Sbjct: 2947 GGSKSLFIVSQDGKLYACGEGTN-GRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKH 3005
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
+++T G+V++WG E G G + + K L + + A
Sbjct: 3006 AMALTLDGKVFSWGEGED----------GKLGHGNRVTLEKPKLLESLRTKRIRDIACGS 3055
Query: 176 VVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLIL 227
TSS E GD L P LVT G ++ +VA G R TL L
Sbjct: 3056 SHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQGHRVVQVACGSRDAQTLCL 3115
Query: 228 SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAG 287
++ G V+ WG G G+LG G + PH + L N G
Sbjct: 3116 TEEGLVFSWGDGDFGKLGRGGS-EGCSVPHQVERL------------------NGVG--- 3153
Query: 288 RSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
V +I CG + S +T G + T+G G Y
Sbjct: 3154 ---VVQIECGAQFSLALTKIGEVWTWGKGDY 3181
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + + H P+ ++ A G HCV+
Sbjct: 4176 GSQFSVALTRSGSVYTWGKGDYHRLGH-GNTDHVRRPKKVAALQGKKIISIATGSLHCVA 4234
Query: 119 VTEAGEVYTWG 129
+++GEV+TWG
Sbjct: 4235 CSDSGEVFTWG 4245
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 82/208 (39%), Gaps = 47/208 (22%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGK--HGETPEPFPLPTEASVVKA------ 109
G ++ A S G+L TWG T G+ HG + + F +PT+ +KA
Sbjct: 636 AGASYSAAVSSVGELFTWGRG--------TYGRLGHGNSDDKF-VPTQVQALKAYKVVDV 686
Query: 110 --AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
+G AH ++VT+ G ++ WG DFG G + + S LP +
Sbjct: 687 ALGSGDAHSMAVTDGGLLFAWG----------DGDFGKLG----NGSCNGSPLPVQIEGV 732
Query: 168 SDKRAGEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITK 216
S + + + S A S G+ + P LV G KI
Sbjct: 733 S---SVARIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVD 789
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQL 244
VA G H L L+ G+++GWG Q+
Sbjct: 790 VAVGSAHCLALTSSGELYGWGRNDYQQI 817
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G KI +A G H + SD G+V+ WG EGQLG G+ + + P L+ L+
Sbjct: 4219 GKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLGDGT-VTAIQRPRLVQSLQ 4270
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 25/92 (27%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G K+ VA G H L ++D GQV+ WG GQ G G+ + + P+L+ L+
Sbjct: 3203 GKKVIHVAVGALHCLAVTDSGQVFAWGDNDHGQQGSGNTV-VNKKPNLVLGLDGV----- 3256
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
+V +ACG HS
Sbjct: 3257 -------------------FVNRVACGSSHSV 3269
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 101/271 (37%), Gaps = 68/271 (25%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
A+A S +G++ +WG+ EG L G P + E V AG ++ +V+
Sbjct: 591 AMALSSAGEVYSWGAG--EG-GRLGHGDTASKEVPTKIALEKQVTAIYAGASYSAAVSSV 647
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE-QAPPSDKRAGEEVVKRRK 181
GE++TWG +G G D +PT+ QA + K V
Sbjct: 648 GELFTWG----------RGTYGRLGHGNSDD----KFVPTQVQALKAYK------VVDVA 687
Query: 182 TSSAREESENPASGDEFFTL---------------SPCLVTLNPGVKITKVAAGGRHTLI 226
S S G F SP V + + ++ +G + ++
Sbjct: 688 LGSGDAHSMAVTDGGLLFAWGDGDFGKLGNGSCNGSPLPVQIEGVSSVARIYSGSQFSVA 747
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL-IPCLEHAASGKDRPLLVRQGSVNSSGK 285
LS G ++ WG G G+LG G+ + H +P L HA GK
Sbjct: 748 LSYDGTLYSWGKGHGGRLGHGN------SEHSNVPKLVHALEGKK--------------- 786
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
+ ++A G H +T +G L +GWG
Sbjct: 787 -----IVDVAVGSAHCLALTSSGEL--YGWG 810
>gi|255089408|ref|XP_002506626.1| predicted protein [Micromonas sp. RCC299]
gi|226521898|gb|ACO67884.1| predicted protein [Micromonas sp. RCC299]
Length = 405
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 119/308 (38%), Gaps = 80/308 (25%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP----LPTE---ASVV 107
V GG ++A S G + TWG+ DEGQ K + P LP E A V+
Sbjct: 53 VVAGGL-HSVAVSVEGDIYTWGT-HDEGQLGRNVPKDDDEAPAVPGKVTLPAECKGAEVI 110
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL------- 160
A A + ++ + G V+ G V +D G G F D+ G+Q +
Sbjct: 111 NAEATDSATFALFDDGSVFGCG---------VFKDDGELG-FSPDNPGRQHGMAPVAGPR 160
Query: 161 -PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL------------------ 201
P+ AP AG V + R+ AS + TL
Sbjct: 161 APSHTAPIESMAAGNGHVVLLTSRFGRDGKA--ASKPKVLTLGAGAQGQLGRVGTRIGPR 218
Query: 202 -------SPCLVTLNPGV-KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM- 252
+P V + G + V AGG HT +L+D+ +V +G GQLGL M
Sbjct: 219 AHSRTLLAPAAVRMPRGAGQPVAVFAGGFHTFVLTDLDKVVAFGLNNFGQLGLPPDDSMA 278
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
V P ++P L SGK + E+ACG H+ +T +G +LT
Sbjct: 279 VFIPKIVPSL--------------------SGKG----ITELACGEHHTVALTRSGHVLT 314
Query: 313 FGWGLYGQ 320
FG YG+
Sbjct: 315 FGRYAYGR 322
>gi|380792513|gb|AFE68132.1| RCC1 and BTB domain-containing protein 2, partial [Macaca mulatta]
Length = 369
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 88/214 (41%), Gaps = 31/214 (14%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG + ++G ST Q +K
Sbjct: 162 YHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 208
Query: 174 EEVVKRRKTSSAREESENPA---SGDEFFTL-------SPCLVTLNPGVKITKVAAGGRH 223
+ + + E +G+ L +PC V G+++ +VA G H
Sbjct: 209 TIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAH 268
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
TL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 269 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 140 LVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 198
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 259 VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 288
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 71/172 (41%), Gaps = 22/172 (12%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWG-Y 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ L S + TP V + A G+AH + +T+ G+VY WG
Sbjct: 232 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG--------- 282
Query: 139 VTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
A S+ + TG +S + PT D+ TS+A+ +
Sbjct: 283 -------ANSYGQLGTGNKSNQSYPTPVTMEKDRIIEIAACHSTHTSAAKTQ 327
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC Q S N S K V E+ACG HS V+T G +
Sbjct: 136 -TNHGLVPC---------------QISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 176 WGYNNSGQ 183
>gi|410947370|ref|XP_003980422.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Felis catus]
Length = 527
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 93/227 (40%), Gaps = 41/227 (18%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL K C G G LAT+E G++ TWG S L +G P
Sbjct: 65 PRRLDSLSGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLMPCH 120
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V + A G H + +T GEV+ WG+ ++G ST
Sbjct: 121 ISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTAN 167
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--------------ASGDEFFTLS 202
Q +P + + + S A + +SG++ +
Sbjct: 168 Q-PIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQ---PT 223
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
PC ++ G+++ +VA G HTL+L+D GQV+ WG GQLG G++
Sbjct: 224 PCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 270
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K +T+VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 116 LMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 174
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 175 TGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIR 234
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 235 VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 264
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A +G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 57 GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 111
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 112 -TNHGLMPC---------------HISTNLSNKQ----VTEVACGSYHSLVLTSDGEVFA 151
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 152 WGYNNSGQ 159
>gi|403303292|ref|XP_003942270.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Saimiri boliviensis boliviensis]
Length = 551
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 95/232 (40%), Gaps = 36/232 (15%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL K C G G LAT+E G++ TWG S L +G P
Sbjct: 89 PRRLDSLSGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 144
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG + ++G ST
Sbjct: 145 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTIN 191
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA----SGDEFFTL-------SPCL 205
Q +P + + + A +S +G+ L +PC
Sbjct: 192 Q-PIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCR 250
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
V G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 251 VAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS I P P +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQ-PIPRRV 198
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 258
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 259 VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 288
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S I PIP R+ G K V CG +A +SG++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 176 WGYNNSGQ 183
>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
Length = 3840
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R+ DR
Sbjct: 3064 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSY-----------------DR 3106
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P LV +N V +IACG HSA +T +G +LT+G G YG+
Sbjct: 3107 PKLVEH--LNGMN------VADIACGSAHSAAITASGHVLTWGKGRYGR 3147
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R + D+
Sbjct: 1919 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL-----------------DK 1961
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P LV ++ S ++++ACG HSA ++ G L T+G G YG+
Sbjct: 1962 PRLVE--TLRSKK------IRDVACGSSHSAAISSQGELYTWGLGEYGR 2002
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
G F+LA + +G++ TWG D Y G +H P+P V+ A G
Sbjct: 2085 GAQFSLALTRAGEVWTWGKGD-----YYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGAL 2139
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+AG+VY WG
Sbjct: 2140 HCLAVTDAGQVYAWG 2154
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 79/222 (35%), Gaps = 66/222 (29%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
L G + CG G L ++ + +WG D Y G+ G P E+
Sbjct: 3165 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKLPYKIESL 3219
Query: 105 ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
V+K G V++T++G VYTW S G F + G
Sbjct: 3220 AGLGVIKVECGSQFSVALTKSGAVYTW----------------SKGDFHRLGHGSV---- 3259
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
+ V+R K +A + G KI +A G
Sbjct: 3260 -------------DHVRRPKKVAALQ-----------------------GKKIISIATGS 3283
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
H + SD G+V+ WG EGQLG G+ + + P L+ L+
Sbjct: 3284 LHCVACSDSGEVYTWGDNDEGQLGDGT-VTAIQRPRLVAALQ 3324
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 116/309 (37%), Gaps = 62/309 (20%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAA---G 112
GG ++GK+ G + L G P P LP VVK A G
Sbjct: 1871 AGGSKSLFIVGQNGKVYACGEGTN---GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSG 1927
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H +++T G+V++WG E G G + + K + T ++ K+
Sbjct: 1928 GKHALALTLDGKVFSWGEGE----------DGKLGHGNRTTLDKPRLVETLRS----KKI 1973
Query: 173 GEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
+ +++ + E GD L P LV G ++ +VA G R
Sbjct: 1974 RDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALAGRRVIQVACGSR 2033
Query: 223 --HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDRPL-L 274
TL L++ G V+ WG G G+LG G + TPH I L G L L
Sbjct: 2034 DAQTLALTEDGSVFSWGDGDFGKLGRGGS-EGSDTPHEIERLSGIGVIQIECGAQFSLAL 2092
Query: 275 VRQGSVNSSGK--------AGRSYVKE--------------IACGGRHSAVVTDAGALLT 312
R G V + GK G +V++ +A G H VTDAG +
Sbjct: 2093 TRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYA 2152
Query: 313 FGWGLYGQR 321
+G +GQ+
Sbjct: 2153 WGDNDHGQQ 2161
>gi|431898775|gb|ELK07147.1| X-linked retinitis pigmentosa GTPase regulator [Pteropus alecto]
Length = 1019
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 27/115 (23%)
Query: 208 LNPGV--KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
L PG+ K+ +VA GG HT++L++ V+ +G G GQLGLG+ I P ++ +
Sbjct: 282 LVPGIPEKVIQVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFIFETAEPKILEPI--- 337
Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
KD+ ++ I+CG H+A++TD G + TFG G +G+
Sbjct: 338 ---KDQKIIY------------------ISCGENHTALITDVGLMYTFGDGRHGK 371
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 58/139 (41%), Gaps = 31/139 (22%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
C+ L P K+ A G HTL+L++ G+V+ G EGQLGLG I +
Sbjct: 125 CVKALKPE-KVKFAACGRNHTLVLTEEGKVYAAGGNNEGQLGLGDTEDRNTFHPICFFTS 183
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
H + L +A L G++ NS G+ G V I+
Sbjct: 184 QHQLKQL--SAGSNTSAALTVDGNLFMWGDNSEGQIGLKNVPNVCVPHQVTVGKPIAWIS 241
Query: 296 CGGRHSAVVTDAGALLTFG 314
CG HSA VT G L TFG
Sbjct: 242 CGYYHSAFVTMEGELYTFG 260
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 30/135 (22%)
Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASGK 269
T +A G HT I++ +++ +G GQLGLGSR V P + L + AA G+
Sbjct: 83 TYLACGDEHTAIITGNNKLYMFGSNNWGQLGLGSR-STVSKPTCVKALKPEKVKFAACGR 141
Query: 270 DRPL-LVRQGSV-----NSSGKAG------------------RSYVKEIACGGRHSAVVT 305
+ L L +G V N+ G+ G + +K+++ G SA +T
Sbjct: 142 NHTLVLTEEGKVYAAGGNNEGQLGLGDTEDRNTFHPICFFTSQHQLKQLSAGSNTSAALT 201
Query: 306 DAGALLTFGWGLYGQ 320
G L +G GQ
Sbjct: 202 VDGNLFMWGDNSEGQ 216
>gi|194206275|ref|XP_001917412.1| PREDICTED: RCC1 domain-containing protein 1 [Equus caballus]
Length = 197
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 70/151 (46%), Gaps = 22/151 (14%)
Query: 99 PLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST 154
P P EA + + AAG H VSV+E G+VY WGW E A TR G K
Sbjct: 22 PRPLEALQGLPMAEVAAGGWHSVSVSETGDVYIWGWNESGQLALPTRSLAEDG---KTVA 78
Query: 155 GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
G+ + L G +V + T+ + + P + F P L+ L G +
Sbjct: 79 GEAAGL---------HEGGPDV---KSTAGGEDGAPTPFIAVQPF---PALLDLPRGSEA 123
Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
K + G RHT +++ G+++ WG+G GQLG
Sbjct: 124 VKASCGSRHTAVVTRTGELYTWGWGKYGQLG 154
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 13/133 (9%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI- 259
L P + G+ + +VAAGG H++ +S+ G V+ WG+ GQL L +R +
Sbjct: 20 LEPRPLEALQGLPMAEVAAGGWHSVSVSETGDVYIWGWNESGQLALPTRSLAEDGKTVAG 79
Query: 260 ---------PCLEHAASGKD---RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA 307
P ++ A G+D P + Q S + +CG RH+AVVT
Sbjct: 80 EAAGLHEGGPDVKSTAGGEDGAPTPFIAVQPFPALLDLPRGSEAVKASCGSRHTAVVTRT 139
Query: 308 GALLTFGWGLYGQ 320
G L T+GWG YGQ
Sbjct: 140 GELYTWGWGKYGQ 152
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP + VKA+ G H VT GE+YTWGW
Sbjct: 109 QPFPALLDLPRGSEAVKASCGSRHTAVVTRTGELYTWGW 147
>gi|50978834|ref|NP_001003126.1| X-linked retinitis pigmentosa GTPase regulator [Canis lupus
familiaris]
gi|23396836|sp|Q9N1T2.1|RPGR_CANFA RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
Flags: Precursor
gi|8131936|gb|AAF73144.1|AF148801_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 1003
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 27/113 (23%)
Query: 210 PGV--KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
PG+ K+ +VA GG HT++L++ V+ +G G GQLGLG+ + P I EH
Sbjct: 239 PGIPGKVVQVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAI---EHIKD 294
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
K + IACG H+A++TD G + TFG G +G+
Sbjct: 295 QK---------------------ISFIACGENHTALITDMGLMYTFGDGRHGK 326
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 57/138 (41%), Gaps = 29/138 (21%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL- 262
C+ L P K+ A G HTL+ ++ G+V+ G EGQLGLG + T HLI
Sbjct: 80 CVKALKPE-KVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGD-TEERSTFHLISFFT 137
Query: 263 ------EHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IAC 296
+ +A L G + NS G+ G V I+C
Sbjct: 138 SQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWISC 197
Query: 297 GGRHSAVVTDAGALLTFG 314
G HSA VT G L TFG
Sbjct: 198 GYYHSAFVTTEGQLYTFG 215
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG---SRIKMVP 254
F T P + KI+ +A G HT +++DMG ++ +G G G+LGLG S + +P
Sbjct: 281 FETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIP 340
Query: 255 T 255
T
Sbjct: 341 T 341
>gi|301094633|ref|XP_002896421.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262109510|gb|EEY67562.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 1289
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 127/343 (37%), Gaps = 62/343 (18%)
Query: 9 EENEKMEECKE--TVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
EE + + +E + +Y+WG P +L P L G V GG T
Sbjct: 434 EEGDDATQVEEPSSCMYVWGRPPSLEGGTPLVLRPKHVSLANGQPIVQVACGGEHLLYLT 493
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGET-----------PEPFPLPT------------E 103
S +G + ++G +D+ + +T H T F P
Sbjct: 494 S-TGDVYSYGDNEDKKVAAVTVATHTSTLPDNESTRVVSTSSFLAPHLVEELALEKALHR 552
Query: 104 ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
++ A G H +++T+AGE+YTWG S + R G + K +L E
Sbjct: 553 TTIAMVACGAQHSLAITDAGELYTWG------SGEDGR-LGHGDMRDRAVPRKVMSLLRE 605
Query: 164 QAPPSDKRAGEEVVKRRKTSS---AREESENPASGDEFFTLSPC-LVTLNPGVKITKVAA 219
+ V K S R + GD + +P +V G I+ V
Sbjct: 606 SVVSASCGGAHTAVLTAKGSVFTFGRGRNGRLGLGDNKWRDTPHPIVGFPQGTSISLVVC 665
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLG--SRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
G T L G V+ WG GEGQ GLG R ++VP
Sbjct: 666 GWNFTAALDRQGSVFTWGKTGEGQCGLGYVDRDQVVPR---------------------- 703
Query: 278 GSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ S V ++ACG H+ V+T +G L ++G G YGQ
Sbjct: 704 -CVDKLRDVAGSSVVDVACGYTHTVVLTASGELYSWGLGEYGQ 745
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 23/107 (21%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G + VA G HT++L+ G+++ WG G GQLG G + +P +P
Sbjct: 713 GSSVVDVACGYTHTVVLTASGELYSWGLGEYGQLGTGDVYQPLPARVQLPA--------- 763
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ + + R Y CG HS T+ + F WGL
Sbjct: 764 -------DALCAPDQLARVY-----CGAFHSIATTEQRVM--FAWGL 796
>gi|260798953|ref|XP_002594464.1| hypothetical protein BRAFLDRAFT_72132 [Branchiostoma floridae]
gi|229279698|gb|EEN50475.1| hypothetical protein BRAFLDRAFT_72132 [Branchiostoma floridae]
Length = 1711
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 27/118 (22%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P LVT V VA G H+ L G+VW WG+G GQLG G+ + + PHL+ +
Sbjct: 963 PTLVTQLKDVFCVAVATGQYHSAALDGEGRVWMWGWGVHGQLGQGN-AENLNKPHLVAAV 1021
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
++A +++ G H+AV+T +G + TFG GL+GQ
Sbjct: 1022 QNAV--------------------------QVSTGYAHTAVLTRSGEVFTFGCGLHGQ 1053
Score = 38.9 bits (89), Expect = 3.8, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 31/110 (28%)
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
+V+ G HT +L+ G+V+ +G G GQLG G+ K+ IP GK
Sbjct: 1026 QVSTGYAHTAVLTRSGEVFTFGCGLHGQLGHGATDKVS-----IPQRVQGIMGK------ 1074
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG-----WGLYGQ 320
V ++ACG H+ VVT + + TFG W Y Q
Sbjct: 1075 ---------------VAQVACGLFHTVVVTSSQQVYTFGRHPQVWKQYLQ 1109
>gi|410957262|ref|XP_003985250.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Felis catus]
Length = 1031
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 67/153 (43%), Gaps = 31/153 (20%)
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
L P + G+KI +V+ G H+L LS+ GQV+ WG GQLGLG + +P
Sbjct: 126 INLIPQKIKTLTGIKIIQVSCGNYHSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQR 185
Query: 259 ------IPCLEHAASGKDRPLLVRQGS-----VNSSGKAG--------RSY--------- 290
IP + AA G L G+ N++G+ +SY
Sbjct: 186 VRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALK 245
Query: 291 ---VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V I+CG H+AV+T G + TFG GQ
Sbjct: 246 TLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQ 278
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 24/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+++ V+ G H+L + G+V+ WG G EGQLG+G ++ P I L
Sbjct: 86 LRVELVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTLTGIK----- 140
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +++CG HS +++ G + ++G +GQ
Sbjct: 141 -------------------IIQVSCGNYHSLALSEDGQVFSWGSNSHGQ 170
>gi|226507778|ref|NP_001140994.1| uncharacterized protein LOC100273073 [Zea mays]
gi|194702086|gb|ACF85127.1| unknown [Zea mays]
gi|413922319|gb|AFW62251.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 1 [Zea mays]
gi|413922320|gb|AFW62252.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 2 [Zea mays]
Length = 389
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 121/323 (37%), Gaps = 62/323 (19%)
Query: 17 CKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKL 72
C + ++ WG+ G PE SP P G GG LA + G+
Sbjct: 57 CDDGRLFTWGWNQRGTLGHPPETKTESSPGPVDALAGFKIVQAAIGGW-HCLAVDDKGRA 115
Query: 73 ITWGSADDEGQSYLTSGKHGETPE-----------PFPLPTEAS----VVKAAAGWAHCV 117
WG G Y G+ GE PE P+P + V + AAG H V
Sbjct: 116 YAWG-----GNEY---GQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGGTHSV 167
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
+T+ G V+TWG + P + + S G + + E+V+
Sbjct: 168 VLTQEGHVWTWG--QPWPPGDIKQI-----STPVRVQGLEKVRVIAVGAFHNLALTEDVI 220
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
+ E +GD P V + + +AAGG H+ L+ G+V+ WG
Sbjct: 221 L---WAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTIDGEVYAWG 277
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
G G+LG G + H++P +G+D + +++CG
Sbjct: 278 RGEHGRLGFGDD----KSSHMVPLKVELLAGED--------------------IVQVSCG 313
Query: 298 GRHSAVVTDAGALLTFGWGLYGQ 320
G HS + G + ++G G +G+
Sbjct: 314 GTHSVALARDGRMFSYGRGDHGR 336
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 103/284 (36%), Gaps = 79/284 (27%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA + G+L TWG + K +P P +V+AA G HC++V +
Sbjct: 53 SLAICDDGRLFTWGWNQRGTLGHPPETKTESSPGPVDALAGFKIVQAAIGGWHCLAVDDK 112
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
G Y WG E +G G P K G ++R
Sbjct: 113 GRAYAWGGNE----------YGQCGE-----------------EPERKEDGTRALRRDIP 145
Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
R C + L K+ +VAAGG H+++L+ G VW W G
Sbjct: 146 IPQR-----------------CALKL----KVRQVAAGGTHSVVLTQEGHVWTW-----G 179
Query: 243 QLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVRQGSV------NSSGKAG------ 287
Q IK + TP + LE A G L + + + N G+ G
Sbjct: 180 QPWPPGDIKQISTPVRVQGLEKVRVIAVGAFHNLALTEDVILWAWGNNEYGQLGTGDTQP 239
Query: 288 RSY-----------VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
RS + +IA GG HS +T G + +G G +G+
Sbjct: 240 RSQPIRVEGLSDLSLVDIAAGGWHSTALTIDGEVYAWGRGEHGR 283
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 16/111 (14%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
D+ + P V L G I +V+ GG H++ L+ G+++ +G G G+LG G ++
Sbjct: 289 DKSSHMVPLKVELLAGEDIVQVSCGGTHSVALARDGRMFSYGRGDHGRLGYGRKV-TTGH 347
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P +P + P L SS + GR K +ACGGRH+ + +
Sbjct: 348 PMELPI--------NLPPL-------SSSRDGRWQAKYVACGGRHTLAIAE 383
>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
Length = 4802
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+K V++GG+H L LS G V+ WG G +G+LG G+++ DR
Sbjct: 4030 IKKVAVSSGGKHCLALSSEGHVYSWGEGDDGKLGHGNKMSY-----------------DR 4072
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ G + +IACGG HSA +T AG L T+G G YG+
Sbjct: 4073 PKLIED-------LLGVEII-DIACGGHHSAAITSAGWLYTWGKGRYGR 4113
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+K V +GG+H L L+ G+V+ WG G +G+LG G+ + + D+
Sbjct: 3048 IKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNNMSL-----------------DK 3090
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K+ R +++IACG HSA + G L T+G G YG+
Sbjct: 3091 PKLIE------TLKSKR--IRDIACGSGHSAAIASNGELYTWGLGEYGR 3131
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 114/309 (36%), Gaps = 75/309 (24%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P+ P LS + K G ALA ++ GK+ +WG +D L G +
Sbjct: 3037 PKPIPFLSQFVIK-------KVAVHSGGKHALALTQDGKVFSWGEGED---GKLGHGNNM 3086
Query: 93 ETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
+P + T S + A G H ++ GE+YTWG E +G G
Sbjct: 3087 SLDKPKLIETLKSKRIRDIACGSGHSAAIASNGELYTWGLGE----------YGRLGHGD 3136
Query: 151 KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD---------EFFTL 201
+ + + T G VV+ +R+ + D +F L
Sbjct: 3137 TVTQARPKLVQT--------LVGHRVVQ--VACGSRDAQTMALTTDGCVYSWGDGDFGKL 3186
Query: 202 ---------SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+P +V G+ + +V G + +L L+ G+VW WG G +LG G+
Sbjct: 3187 GRGGSDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGN---- 3242
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
+H +P LV G G+ V +A G H VTD G +
Sbjct: 3243 ----------DHHVR---KPTLVE-------GLRGKKIV-HVAVGALHCLAVTDTGQVYA 3281
Query: 313 FGWGLYGQR 321
+G +GQ+
Sbjct: 3282 WGDNDHGQQ 3290
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 128/324 (39%), Gaps = 70/324 (21%)
Query: 18 KETVVYMWGY--------LPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSE 68
+E+ VY+WG L G S K P+ S + ++L K + GG S+
Sbjct: 2959 QESAVYVWGLNDKDQLGGLKG-SKIKLPVYSEVLSKL------KPIHIAGGSKTLFIVSQ 3011
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEAGEVY 126
GKL G + G+ L + P+P P ++ + K A +G H +++T+ G+V+
Sbjct: 3012 EGKLYACGEGTN-GRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQDGKVF 3070
Query: 127 TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR 186
+WG E G G S K + T ++ KR + +++
Sbjct: 3071 SWGEGE----------DGKLGHGNNMSLDKPKLIETLKS----KRIRDIACGSGHSAAIA 3116
Query: 187 EESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVW 234
E GD P LV G ++ +VA G R T+ L+ G V+
Sbjct: 3117 SNGELYTWGLGEYGRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVY 3176
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
WG G G+LG G + G PL+V + +N G V ++
Sbjct: 3177 SWGDGDFGKLGRG-----------------GSDGCYTPLVVER--LNGLG------VVQV 3211
Query: 295 ACGGRHSAVVTDAGALLTFGWGLY 318
CG + S +T G + T+G G Y
Sbjct: 3212 ECGAQFSLALTKYGEVWTWGKGDY 3235
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + T H P ++ A G HCV+
Sbjct: 4196 GSQFSVALTRSGAVYTWGKGDYHRLGHGTD-DHVRRPRKVAALQGKKIISIATGSLHCVA 4254
Query: 119 VTEAGEVYTWG 129
++ GEV+TWG
Sbjct: 4255 CSDKGEVFTWG 4265
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 77/218 (35%), Gaps = 70/218 (32%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G PL ++ V+K
Sbjct: 4141 CGSGDAQTLCVTDDDNVWSWGDGD-----YGKLGRGGSDGCKVPLKIDSLAGLGVIKVEC 4195
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G V++T +G VYTWG G + + G
Sbjct: 4196 GSQFSVALTRSGAVYTWG----------------KGDYHRLGHG---------------- 4223
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ V + RK ++ + G KI +A G H + SD G
Sbjct: 4224 TDDHVRRPRKVAALQ------------------------GKKIISIATGSLHCVACSDKG 4259
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
+V+ WG EGQLG G+ + P L+ HA GK
Sbjct: 4260 EVFTWGDNDEGQLGDGT-TSALHRPRLV----HALQGK 4292
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G++ P LV G KI VA G H L ++D GQV+ WG GQ G G+ +
Sbjct: 3241 GNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT-TSVNR 3299
Query: 255 TPHLIPCLEHAASGK 269
P L+ LE A +
Sbjct: 3300 KPSLVHELEDARVNR 3314
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAA 111
CG G L + SG + +WG D Y G+ G +TP+ + +VVK
Sbjct: 620 CGSGDSQTLCVTASGIVFSWGDGD-----YGKLGRGGTDGSKTPKIVDKLLDINVVKVFC 674
Query: 112 GWAHCVSVTEAGEVYTWG 129
G ++T GEVYTWG
Sbjct: 675 GSQFSAALTAHGEVYTWG 692
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 58/145 (40%), Gaps = 29/145 (20%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-----RIKMVPTPH 257
P L+ GV+I +A GG H+ ++ G ++ WG G G+LG G R K+V
Sbjct: 4073 PKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQ 4132
Query: 258 LIPCLEHAASGKDRPLLVRQGSVN-------SSGKAGRS-----------------YVKE 293
++ A D L N GK GR V +
Sbjct: 4133 DYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIK 4192
Query: 294 IACGGRHSAVVTDAGALLTFGWGLY 318
+ CG + S +T +GA+ T+G G Y
Sbjct: 4193 VECGSQFSVALTRSGAVYTWGKGDY 4217
>gi|449447434|ref|XP_004141473.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Cucumis sativus]
Length = 485
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 93/245 (37%), Gaps = 55/245 (22%)
Query: 95 PEPFPLPTEASV--VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
P+ F P E + + A G H +V G ++TWG DFG G D
Sbjct: 49 PDLFGCPGEINSRWLDIACGREHTAAVASDGSLFTWG----------ANDFGQLG----D 94
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLV------ 206
T ++S LP + + T++ E EN TLS C +
Sbjct: 95 GTEEKSKLPKKVNQLQGEFVKSVSCGAHCTAAIAEPRENDG------TLSTCRLWIWGQN 148
Query: 207 -----------TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
P I +V+ G H + LSD GQ+ WGY GQLG G + +
Sbjct: 149 QGSNFPRLFWGAFTPQTIIRQVSCGAVHVVALSDDGQLQAWGYNEYGQLGRGVTSEGLQG 208
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
+I A + P LV + +++CG HSA +++ G + T+G
Sbjct: 209 ARIINAF--AKFLDEAPELVT--------------ITKVSCGEYHSAAISENGEVYTWGL 252
Query: 316 GLYGQ 320
G GQ
Sbjct: 253 GSMGQ 257
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 134/352 (38%), Gaps = 91/352 (25%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALA-------TSESGKLITWG 76
+G L + EKS + P G+ K V CG C A+A T + +L WG
Sbjct: 89 FGQLGDGTEEKSKL--PKKVNQLQGEFVKSVSCGAHCTAAIAEPRENDGTLSTCRLWIWG 146
Query: 77 SADDEGQSYLTSGKHGETPEPF--PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
++G ++ P F + + + + G H V++++ G++ WG+ E
Sbjct: 147 Q--NQGSNF---------PRLFWGAFTPQTIIRQVSCGAVHVVALSDDGQLQAWGYNE-- 193
Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS 194
++ R S G Q A ++AP E+V K S S +
Sbjct: 194 -YGQLGRGVTSEG-LQGARIINAFAKFLDEAP--------ELVTITKVSCGEYHSAAISE 243
Query: 195 GDEFFT--------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
E +T L P V G+ + +A GG HT ++ G ++
Sbjct: 244 NGEVYTWGLGSMGQLGHCSLQSADKELIPRRVVALDGICVKDIACGGVHTCAITQNGSLY 303
Query: 235 GWGYGGEG------QLGLGSRI--------KMVPTPHLIPCLEHAASGKDRPLL-VRQGS 279
WG G G Q G S I + +P + ++H A G L+ + G
Sbjct: 304 AWGGGQVGQLGVGPQTGFFSCIAGDSETFLRNLPVVVVSDGVQHVACGHSHTLVSTKDGR 363
Query: 280 V-----NSSGKAGR---SY-------------VKEIACGGRHSAVVTDAGAL 310
+ NS G+A +Y V+++A GG HSAV+TDA +L
Sbjct: 364 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 415
>gi|222616116|gb|EEE52248.1| hypothetical protein OsJ_34191 [Oryza sativa Japonica Group]
Length = 425
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 106/270 (39%), Gaps = 59/270 (21%)
Query: 65 ATSESGKLITWGSADDEGQSYL--TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
A + GKL WG + GQ L +GK TP +A V A G H ++ TE
Sbjct: 139 AVTADGKLFAWGR-NSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEE 197
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
GEV +WG G G K S S +E P K +KR
Sbjct: 198 GEVLSWG----------AAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAA 247
Query: 183 S----------------SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
+ E SGDE L P +V P + +VA GG HT +
Sbjct: 248 GMLHSACIDEKGTLFIFGQKTEKGFGRSGDE---LRPTVVEEVPFSE--EVACGGYHTCV 302
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
++D G ++ WG G LGLG MV +P ++ +S P
Sbjct: 303 VTDSGDLYSWGSNENGCLGLGG-TDMVRSPEVLK-----SSLFKFP-------------- 342
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
V +++CG +H+AV++ G + T+GWG
Sbjct: 343 ----VSKVSCGWKHTAVIS-GGDIYTWGWG 367
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 120/312 (38%), Gaps = 98/312 (31%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP-TEASVVKAAAGWA 114
CGG L +ESG++ G +D GQ + S + EP + + VV+ +AG
Sbjct: 80 CGGA--HTLFLTESGRVFAAG-LNDFGQLGIGSSVT-HSLEPIEVSGFDEKVVEVSAGNH 135
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H +VT G+++ WG ++S+G+ KRAG+
Sbjct: 136 HSCAVTADGKLFAWG---------------------RNSSGQLGL---------GKRAGK 165
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
V RK CL ++ VA G H++ ++ G+V
Sbjct: 166 VVSTPRKVD--------------------CLAD----ARVKMVALGSEHSIATTEEGEVL 201
Query: 235 GWGYGGEGQLGLGSRIKMV--------PTPHLIPCLE------------HAASGKDRPLL 274
WG G G+LG G + ++ TP LI L+ H+A ++ L
Sbjct: 202 SWGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTL 261
Query: 275 VRQGSVNSSGKAGRS-------------YVKEIACGGRHSAVVTDAGALLTFGWGLYGQR 321
G G GRS + +E+ACGG H+ VVTD+G L + +G
Sbjct: 262 FIFGQKTEKG-FGRSGDELRPTVVEEVPFSEEVACGGYHTCVVTDSGDLYS-----WGSN 315
Query: 322 MAKCLAGDGINM 333
CL G +M
Sbjct: 316 ENGCLGLGGTDM 327
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 29/125 (23%)
Query: 200 TLSPCLVTLNPGVKI----TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
T P +T PG +A GG HTL L++ G+V+ G GQLG+GS +
Sbjct: 57 TACPFFLTGRPGDDDDDPPASLACGGAHTLFLTESGRVFAAGLNDFGQLGIGSSV----- 111
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
H + +E SG D ++ E++ G HS VT G L +G
Sbjct: 112 THSLEPIE--VSGFDEKVV------------------EVSAGNHHSCAVTADGKLFAWGR 151
Query: 316 GLYGQ 320
GQ
Sbjct: 152 NSSGQ 156
>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 1063
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 63/270 (23%), Positives = 99/270 (36%), Gaps = 96/270 (35%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE--PFPLP------TEASVVKAA 110
G +LA + G+L +WGS +G+ G + +P P +VV+ +
Sbjct: 97 GLSHSLALTNWGQLFSWGSN--------ATGQLGHDLDMVSYPAPRMIKSIATKTVVQIS 148
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G +HC+++T +GE++ WG E +G G +TGK+ +PT
Sbjct: 149 CGHSHCLALTNSGELFAWGANE----------YGQLG---LGTTGKK--VPTAT------ 187
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
LV G+ I +A GG H+ +S
Sbjct: 188 ----------------------------------LVKSLAGIPIAFIACGGNHSFAVSKS 213
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
G ++GWG GQLGL R + ++ S G
Sbjct: 214 GAIFGWGKNTFGQLGLNDL-------------------DSRCYPTQLKTLRSLG------ 248
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ I+CG S +T G + T G G +GQ
Sbjct: 249 VRYISCGDDFSVFLTQEGGVFTCGLGTFGQ 278
>gi|449676621|ref|XP_004208667.1| PREDICTED: uncharacterized protein LOC101237479, partial [Hydra
magnipapillata]
Length = 896
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 94/236 (39%), Gaps = 36/236 (15%)
Query: 51 SWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK 108
S K + CG LA + K+ +WG GQ L S ++ TP+ L V++
Sbjct: 546 SSKQIVSVVCGAYHTLAITSDYKVYSWGWGV-HGQLGLKSVENQLTPKQIDLLDSHKVIQ 604
Query: 109 AAAGWAHCVSVTEAGEVYTWG------------WRECVPSAKVTRDFGSAGSFQKDSTGK 156
AAAG+AH +T VYT+G +++ +P S DS
Sbjct: 605 AAAGYAHSAVLTSQRYVYTFGADLYGQLGIGSHYKQVIPQL--------VDSLTLDSIYL 656
Query: 157 QSALPTEQAPPSDK-------RAGEEVVKRRKTSSA---REESENPASGDEFFTLSPCLV 206
S P E S+ R + K S+ R+ + N + F P +
Sbjct: 657 ISCGPFETIAISEDQTIFCWGRNYHQFYICAKAESSKYGRKMASNTKDLNHRFY--PETL 714
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
IT++ G H +IL+ + QV+ WGY GQLG ++I P L+ L
Sbjct: 715 QFQLQHPITQIFCGNWHYIILTSVNQVYTWGYNDCGQLGHYNKIDQ-SAPRLVKAL 769
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 91/226 (40%), Gaps = 56/226 (24%)
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
+ A G H VT E+YTWG +EC G +KD+ + + LP
Sbjct: 449 RIACGRNHIAFVTNNKELYTWG-KEC------------GG--RKDNV-QNTCLPMRMENL 492
Query: 168 SDKRAGEEVVK----RRKTSSAREESENPASGDEFFTL---------SPCLVTLNPGVKI 214
++ G +VV T + EE +E+ L P L+T +I
Sbjct: 493 HNQ--GIQVVSVACGEFHTIALCEEGVYSWGSNEYGQLGVGDTRTRYRPVLITHISSKQI 550
Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLL 274
V G HTL ++ +V+ WG+G GQLGL S ++ TP I L+ S K
Sbjct: 551 VSVVCGAYHTLAITSDYKVYSWGWGVHGQLGLKS-VENQLTPKQIDLLD---SHK----- 601
Query: 275 VRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V + A G HSAV+T + TFG LYGQ
Sbjct: 602 ----------------VIQAAAGYAHSAVLTSQRYVYTFGADLYGQ 631
>gi|326427987|gb|EGD73557.1| hypothetical protein PTSG_05264 [Salpingoeca sp. ATCC 50818]
Length = 441
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 52/108 (48%), Gaps = 25/108 (23%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
KI ++A G H+++L G VW WG GG GQLG GS I PTP RP
Sbjct: 247 KIKQLACGKTHSMVLDTHGDVWAWGRGGFGQLGHGS-IHDEPTP--------------RP 291
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ QG S IA GG HS V++ +G + +FGW + Q
Sbjct: 292 VEALQGMCMSM----------IAAGGWHSLVLSSSGDVYSFGWNNHHQ 329
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G+ ++ +AAGG H+L+LS G V+ +G+ QLG + P LI E + S D
Sbjct: 297 GMCMSMIAAGGWHSLVLSSSGDVYSFGWNNHHQLGRDTTDTPPAVPGLIELEESSDSTAD 356
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
S + G V +ACG HS VT G + +GW +GQ
Sbjct: 357 -------NEQTHSLRHGEDVVS-VACGSAHSYAVTSVGQVFGWGWAEHGQ 398
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 45/173 (26%)
Query: 96 EPFPLPTEA-----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
EP P P EA + AA GW H + ++ +G+VY++GW +
Sbjct: 286 EPTPRPVEALQGMCMSMIAAGGW-HSLVLSSSGDVYSFGW-------------NNHHQLG 331
Query: 151 KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNP 210
+D+T A+P +++ ++S + ++E S L
Sbjct: 332 RDTTDTPPAVPG-------------LIELEESSDSTADNEQTHS-------------LRH 365
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + VA G H+ ++ +GQV+GWG+ GQ G ++ V P +IP L+
Sbjct: 366 GEDVVSVACGSAHSYAVTSVGQVFGWGWAEHGQFGPNTKESHVIKPTVIPFLQ 418
>gi|296087557|emb|CBI34146.3| unnamed protein product [Vitis vinifera]
Length = 329
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 85/214 (39%), Gaps = 27/214 (12%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
A + A H ++TE+GE+YTWG + + + G K ALP
Sbjct: 86 NAKIRHIATAGTHTAAITESGELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALPV 145
Query: 163 EQAPPSDKRAGEEVVKRRKT--SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
A S V+ + + + GD+ P + V+I ++A+G
Sbjct: 146 PVAAVSCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWKPQPIPSLQDVRIIQIASG 205
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
G H+L L+D G+V WGYG GQLG S I+ P +I L
Sbjct: 206 GYHSLALTDDGKVLSWGYGQHGQLG-HSSIENQKIPTVIEAL------------------ 246
Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
+V IACGG SA +TD G L +G
Sbjct: 247 ------ADEHVIYIACGGSSSAAITDNGKLYMWG 274
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
CGG F + ++ G+L WG A+ + G P+P P + +++ A+G H
Sbjct: 152 CGGF--FTMVLTQEGQLWNWG-ANSNYELGRGDKVGGWKPQPIPSLQDVRIIQIASGGYH 208
Query: 116 CVSVTEAGEVYTWGW 130
+++T+ G+V +WG+
Sbjct: 209 SLALTDDGKVLSWGY 223
>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
Length = 4853
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+K V++GG+H + LS G V+ WG G +G+LG G+++ DR
Sbjct: 4081 IKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSY-----------------DR 4123
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ G V +IACGG HSA +T AG L T+G G YG+
Sbjct: 4124 PKLIED-------LLGVEIV-DIACGGHHSAAITSAGWLYTWGKGRYGR 4164
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+K V +GG+H L L+ G+V+ WG G +G+LG G+ I + P LI L
Sbjct: 3099 IKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCISL-DKPKLIEVL--------- 3148
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
K+ R +++IACG HSA + G L T+G G YG+
Sbjct: 3149 -------------KSKR--IRDIACGSGHSAAIASNGELYTWGLGEYGR 3182
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 111/312 (35%), Gaps = 81/312 (25%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P+ P LS + K G ALA ++ GK+ +WG +D GK G
Sbjct: 3088 PKAIPFLSQFVIK-------KVAVHSGGKHALALTQDGKVFSWGEGED--------GKLG 3132
Query: 93 -------ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS 145
+ P+ + + A G H ++ GE+YTWG G
Sbjct: 3133 HGNCISLDKPKLIEVLKSKRIRDIACGSGHSAAIASNGELYTWG-------------LGE 3179
Query: 146 AGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV------KRRKTSSAREESENPASGDEFF 199
G T Q+ QA G VV + +T + + + GD F
Sbjct: 3180 YGRLGHGDTITQTRPKLVQA-----LIGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDF 3234
Query: 200 ----------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
+P LV + + +V G + +L L+ G+VW WG G +LG G+
Sbjct: 3235 GKLGRGGSDGCYTPLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGN- 3293
Query: 250 IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA 309
+H +P LV G G+ + +A G H VTD G
Sbjct: 3294 -------------DHHVR---KPTLVE-------GLRGKKII-HVAVGALHCLAVTDTGQ 3329
Query: 310 LLTFGWGLYGQR 321
+ +G +GQ+
Sbjct: 3330 VYAWGDNDHGQQ 3341
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 77/218 (35%), Gaps = 70/218 (32%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G PL ++ VVK
Sbjct: 4192 CGSGDAQTLCVTDDDNVWSWGDGD-----YGKLGRGGSDGCKVPLKIDSLAGLGVVKVEC 4246
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G V++T +G VYTWG G + + G
Sbjct: 4247 GSQFSVALTRSGAVYTWG----------------KGDYHRLGHG---------------- 4274
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ V + RK ++ + G KI +A G H + SD G
Sbjct: 4275 TDDHVRRPRKVAALQ------------------------GKKIISIATGSLHCVACSDKG 4310
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
+V+ WG EGQLG G+ + P L+ HA GK
Sbjct: 4311 EVFTWGDNDEGQLGDGT-TSALHRPRLV----HALQGK 4343
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 95/225 (42%), Gaps = 21/225 (9%)
Query: 53 KDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET-----PEPFPLPTEASV 106
+D+ CG G A+A++ G+L TWG + Y G HG+T P+ V
Sbjct: 3154 RDIACGSGHSAAIASN--GELYTWGLGE-----YGRLG-HGDTITQTRPKLVQALIGHRV 3205
Query: 107 VKAAAGW--AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ 164
V+ A G A +++T G VY+WG + K+ R GS G + + + L Q
Sbjct: 3206 VQVACGSRDAQTMALTTDGYVYSWGDGDF---GKLGRG-GSDGCYTPLLVDRLNNLGVIQ 3261
Query: 165 APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
+ + + + + G++ P LV G KI VA G H
Sbjct: 3262 VECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHC 3321
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
L ++D GQV+ WG GQ G G+ + P L+ LE A +
Sbjct: 3322 LAVTDTGQVYAWGDNDHGQQGNGT-TSVNRKPSLVHDLEDARVNR 3365
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAA 111
CG G L + SG + +WG D Y G+ G +TP+ + +VVK
Sbjct: 679 CGSGDSQTLCVTASGIVFSWGDGD-----YGKLGRGGTDGSKTPKIVDKLLDINVVKVFC 733
Query: 112 GWAHCVSVTEAGEVYTWG 129
G ++T GEVYTWG
Sbjct: 734 GSQFSAALTAHGEVYTWG 751
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 58/145 (40%), Gaps = 29/145 (20%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-----RIKMVPTPH 257
P L+ GV+I +A GG H+ ++ G ++ WG G G+LG G R K+V
Sbjct: 4124 PKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQ 4183
Query: 258 LIPCLEHAASGKDRPLLVRQGSVN-------SSGKAGRS-----------------YVKE 293
++ A D L N GK GR V +
Sbjct: 4184 DYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVK 4243
Query: 294 IACGGRHSAVVTDAGALLTFGWGLY 318
+ CG + S +T +GA+ T+G G Y
Sbjct: 4244 VECGSQFSVALTRSGAVYTWGKGDY 4268
>gi|403263469|ref|XP_003924054.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Saimiri boliviensis boliviensis]
Length = 988
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 67/147 (45%), Gaps = 32/147 (21%)
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------ 258
+ TLN G+KI +V+ G H+L LS QV+ WG GQLGLG P+P
Sbjct: 122 ITTLN-GIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEG 180
Query: 259 IPCLEHAASGKDRPLLVRQGS-----VNSSGK---AGRSY-----------------VKE 293
IP + AA G L G+ NS+G+ +GR+ V
Sbjct: 181 IPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIY 240
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQ 320
I+CG H+AV++ G + TFG GQ
Sbjct: 241 ISCGDEHTAVLSQDGKVFTFGDNSSGQ 267
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 31/134 (23%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAA 266
+K V+ G H+L + G+V+ WG G EGQLG+G ++ TP I L +
Sbjct: 75 LKFDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVS 134
Query: 267 SGKDRPLLVRQGSV------NSSGKAG--------------RSY----VKEIACGGRHSA 302
G L + + S NS G+ G RS + ++A GG HS
Sbjct: 135 CGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHSF 194
Query: 303 VVTDAGALLTFGWG 316
++ G +FGWG
Sbjct: 195 ALSLCGT--SFGWG 206
>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 364
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 101/256 (39%), Gaps = 57/256 (22%)
Query: 80 DEGQSYLTSGKHGETPEPFPLPTEA--SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
D GQ L G + + P P L T +V AA H +T+ GEVYT G
Sbjct: 11 DLGQ--LGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTG-------- 60
Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS--G 195
+ D G G G + + + D + K + A E+ AS G
Sbjct: 61 --SNDAGQLGV-----RGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGG 113
Query: 196 DEFFTL-----------SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
DE+ L P +V + + ++VAAGG HTL L+ G V+ +G G G L
Sbjct: 114 DEYGQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGAL 173
Query: 245 GLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
G G+ + TP L+ L V +IACG HSA +
Sbjct: 174 GHGN-LDGCSTPSLVKSLWGLG------------------------VTQIACGENHSAAL 208
Query: 305 TDAGALLTFGWGLYGQ 320
T G + T+G G YGQ
Sbjct: 209 TVDGKVFTWGRGKYGQ 224
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 116/284 (40%), Gaps = 37/284 (13%)
Query: 42 IPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGK--HGETPEP 97
+P R+ D+ V CGF +A +E+G L +WG D+ GQ SG G P
Sbjct: 77 VPIRVAALDTHM-VTHIACGFKHTVAVTETGALASWG-GDEYGQLGFDSGNIVDGVQPRI 134
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ + AAG H +++T +G+VY++G D S S K G
Sbjct: 135 VKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLDGCSTPSLVKSLWG-- 192
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKV 217
L Q + + V + + R + G P V + ++
Sbjct: 193 --LGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNIKLPVAVKALVDHDVIQI 250
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
A GG HTL ++ G+++ WG+G GQ G G++ + V +P + LE
Sbjct: 251 ACGGDHTLAITSDGRLFSWGHGLWGQTGHGTK-EDVLSPKQVHQLE-------------- 295
Query: 278 GSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQR 321
GR V +++ G RH+ V+ D G + +GWG QR
Sbjct: 296 ---------GRVLV-QVSAGARHTVVLLDRGEV--YGWGDCEQR 327
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 62/167 (37%), Gaps = 24/167 (14%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
V + A G H ++T G+V+TWG G G ST + LP
Sbjct: 195 VTQIACGENHSAALTVDGKVFTWGR-------------GKYGQLGHGST-QNIKLPVAVK 240
Query: 166 PPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKIT 215
D + T + + G + LSP V G +
Sbjct: 241 ALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQVHQLEGRVLV 300
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
+V+AG RHT++L D G+V+GWG + QLG R H+ L
Sbjct: 301 QVSAGARHTVVLLDRGEVYGWGDCEQRQLGTCDRCDFSTYGHICVSL 347
>gi|403263467|ref|XP_003924053.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1024
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 67/147 (45%), Gaps = 32/147 (21%)
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------ 258
+ TLN G+KI +V+ G H+L LS QV+ WG GQLGLG P+P
Sbjct: 122 ITTLN-GIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEG 180
Query: 259 IPCLEHAASGKDRPLLVRQGS-----VNSSGK---AGRSY-----------------VKE 293
IP + AA G L G+ NS+G+ +GR+ V
Sbjct: 181 IPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIY 240
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQ 320
I+CG H+AV++ G + TFG GQ
Sbjct: 241 ISCGDEHTAVLSQDGKVFTFGDNSSGQ 267
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 31/134 (23%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAA 266
+K V+ G H+L + G+V+ WG G EGQLG+G ++ TP I L +
Sbjct: 75 LKFDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVS 134
Query: 267 SGKDRPLLVRQGSV------NSSGKAG--------------RSY----VKEIACGGRHSA 302
G L + + S NS G+ G RS + ++A GG HS
Sbjct: 135 CGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHSF 194
Query: 303 VVTDAGALLTFGWG 316
++ G +FGWG
Sbjct: 195 ALSLCGT--SFGWG 206
>gi|296189284|ref|XP_002742715.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Callithrix jacchus]
Length = 577
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 91/231 (39%), Gaps = 34/231 (14%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL K C G G LAT+E G++ TWG S L +G P
Sbjct: 115 PRRLDSLSGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 170
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG + ++G ST
Sbjct: 171 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTVN 217
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLV 206
Q +K + + + E G+ +PC V
Sbjct: 218 QPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRV 277
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 278 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 328
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + PTP +
Sbjct: 166 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PTPRRV 224
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 225 TGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 284
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 285 VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 314
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + P P R+ G K V CG +A +SG++ WG
Sbjct: 199 VFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGY- 257
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 258 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 308
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 107 GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 161
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 162 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 201
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 202 WGYNNSGQ 209
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 167 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPTPRR 223
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V ++GEVY WG+
Sbjct: 224 VTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYN 258
>gi|256085223|ref|XP_002578822.1| regulator of chromosome condensation [Schistosoma mansoni]
gi|350645003|emb|CCD60286.1| regulator of chromosome condensation, putative [Schistosoma
mansoni]
Length = 767
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 69/151 (45%), Gaps = 18/151 (11%)
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG--YGGEGQLGLGSRIKMVPTPHLIPCL 262
L+ VKI V+AG HT L GQVW WG G G +GL ++ TP L+ L
Sbjct: 181 LIPFPTKVKIVMVSAGDSHTAALDTNGQVWLWGTFRGASGPIGLTQPGEICTTPRLL--L 238
Query: 263 EHA----------ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
+A S D L R S+N++ ++V +IA G H +TD G L T
Sbjct: 239 AYAMNSSTENNDGVSNNDSKLSSR--SINTALLTPSTHVVKIASGQDHLVCLTDEGRLYT 296
Query: 313 FGWGLYGQ--RMAKCLAGDGINMGSWVWVTP 341
G G GQ R+A+ A DG G + P
Sbjct: 297 MGCGEQGQLGRVAERFAKDGGRSGISSLLQP 327
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 64/149 (42%), Gaps = 25/149 (16%)
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
P PT+ +V +AG +H ++ G+V+ WG T +
Sbjct: 182 IPFPTKVKIVMVSAGDSHTAALDTNGQVWLWG------------------------TFRG 217
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD-EFFTLSPCLVTLNPGVKITK 216
++ P P + ++ +S+ E ++ ++ D + + S L P + K
Sbjct: 218 ASGPIGLTQPGEICTTPRLLLAYAMNSSTENNDGVSNNDSKLSSRSINTALLTPSTHVVK 277
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
+A+G H + L+D G+++ G G +GQLG
Sbjct: 278 IASGQDHLVCLTDEGRLYTMGCGEQGQLG 306
>gi|297832882|ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 393
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 125/328 (38%), Gaps = 72/328 (21%)
Query: 17 CKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF-ALATSESGK 71
C + ++ WG+ G PE IP+R+ + K G+ LA + G+
Sbjct: 54 CDDGTMFTWGWNQRGTLGHPPETK--TENIPSRVKALANVKITQAAIGGWHCLAVDDQGR 111
Query: 72 LITWGSADDEGQSYLTSGKHGETP--EPFPLPTEASVV------------KAAAGWAHCV 117
WG G Y G+ GE P + P +V + AAG H V
Sbjct: 112 AYAWG-----GNEY---GQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSV 163
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDF-----GSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+T G V+TWG + P + + F + + G L E+
Sbjct: 164 VLTREGHVWTWG--QPWPPGDIKQIFVPVRVQGLENVSIIAVGAFHNLALEE-------- 213
Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
R + E +GD T P V + + +AAGG H+ L+D G+
Sbjct: 214 -----DGRLLAWGNNEYGQLGTGDTQPTSHPVPVHGLDDLTLVDIAAGGWHSTALTDKGE 268
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
V+GWG G G+LG G K + ++P + + +D +
Sbjct: 269 VYGWGRGEHGRLGFGDNDK---SSKMVPQKVNLLAEED--------------------II 305
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+++CGG HS +T G + +FG G +G+
Sbjct: 306 QVSCGGTHSVALTRDGRIFSFGRGDHGR 333
>gi|410947368|ref|XP_003980421.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Felis catus]
Length = 551
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 93/227 (40%), Gaps = 41/227 (18%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL K C G G LAT+E G++ TWG S L +G P
Sbjct: 89 PRRLDSLSGKKIACLSYGSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLMPCH 144
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V + A G H + +T GEV+ WG+ ++G ST
Sbjct: 145 ISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTAN 191
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--------------ASGDEFFTLS 202
Q +P + + + S A + +SG++ +
Sbjct: 192 Q-PIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQ---PT 247
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
PC ++ G+++ +VA G HTL+L+D GQV+ WG GQLG G++
Sbjct: 248 PCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K +T+VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 140 LMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIR 258
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 259 VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 288
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A +G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 44.3 bits (103), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 136 -TNHGLMPC---------------HISTNLSNKQ----VTEVACGSYHSLVLTSDGEVFA 175
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 176 WGYNNSGQ 183
>gi|357601928|gb|EHJ63196.1| hypothetical protein KGM_14591 [Danaus plexippus]
Length = 375
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 17/113 (15%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL---GSRIKMVPTPHLIPCLEHAAS 267
G+KI K+ AGG H+L LSD G ++ WG+ GQLG+ G + K + +P L
Sbjct: 236 GIKIVKIRAGGWHSLALSDCGDLYLWGWNDTGQLGMENKGGQEKKGLKNYTLPTLVDVYD 295
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
D+ + + VK+IACG RH+A++ + + T G YGQ
Sbjct: 296 ENDQLVDL--------------CVKDIACGTRHTALLLEDNTVWTSGCNKYGQ 334
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 59/201 (29%)
Query: 55 VCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------V 106
VC CG+ + ++ G++ TWG+ L G HG+ LPTE +
Sbjct: 187 VCDIVCGYEHYMLLTDEGRVYTWGNG-----RRLQLG-HGDLTN-LELPTEVEALAGIKI 239
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG-KQSALPTEQA 165
VK AG H +++++ G++Y WGW + T G ++ G K LPT
Sbjct: 240 VKIRAGGWHSLALSDCGDLYLWGWND-------TGQLGMENKGGQEKKGLKNYTLPT--- 289
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
+E++ LV L + +A G RHT
Sbjct: 290 ----------------LVDVYDENDQ-------------LVDL----CVKDIACGTRHTA 316
Query: 226 ILSDMGQVWGWGYGGEGQLGL 246
+L + VW G GQLGL
Sbjct: 317 LLLEDNTVWTSGCNKYGQLGL 337
>gi|320168750|gb|EFW45649.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 567
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 23/130 (17%)
Query: 191 NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
NP+S + P + VK+T+VAAG H++ LSD G+V+ WG +G G+G
Sbjct: 135 NPSSSETATIHIPRPIPNLSAVKVTQVAAGAHHSVALSDNGRVYTWGSNKQGACGIG--- 191
Query: 251 KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGAL 310
+P +++ K + EIACG H+ V T+ G L
Sbjct: 192 --------------------KPGSIQRAPQRVKDKLENELIAEIACGFAHTCVRTNGGDL 231
Query: 311 LTFGWGLYGQ 320
FG+ +GQ
Sbjct: 232 YCFGFNRHGQ 241
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 87/225 (38%), Gaps = 37/225 (16%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVV-KAAAGWAH 115
G ++A S++G++ TWGS G P+ E ++ + A G+AH
Sbjct: 162 AAGAHHSVALSDNGRVYTWGSNKQGACGIGKPGSIQRAPQRVKDKLENELIAEIACGFAH 221
Query: 116 CVSVTEAGEVYTWGWR---EC---------VPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
T G++Y +G+ +C VP ++ + G+ +L
Sbjct: 222 TCVRTNGGDLYCFGFNRHGQCGADPSNLPIVPQPRLVSQLRR--RVASIACGRHHSLAIL 279
Query: 164 Q-------APPSDKRAGEEVVKRRKTSSAREESENPA---SGDEFFTLSPCL----VTLN 209
R G E V R + RE + NP + + + LS CL +L
Sbjct: 280 NDGNVYSWGGAEGGRLGSEAVHERHQQTQRELAANPLKELATENYVPLSSCLPAVIKSLA 339
Query: 210 P--------GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
P G ++ + A G H+L L++ G V G G GQLG+
Sbjct: 340 PNSELIGGKGARVVRAAGGWYHSLFLTNAGMVLGTGDTSAGQLGI 384
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 81/225 (36%), Gaps = 82/225 (36%)
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
P P P + V + AAG H V++++ G VYTWG
Sbjct: 145 HIPRPIPNLSAVKVTQVAAGAHHSVALSDNGRVYTWG----------------------- 181
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
+ KQ A + P S +RA + V +++ EN
Sbjct: 182 -SNKQGACGIGK-PGSIQRAPQRV---------KDKLENEL------------------- 211
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDR 271
I ++A G HT + ++ G ++ +G+ GQ G S + +VP P L+ L
Sbjct: 212 -IAEIACGFAHTCVRTNGGDLYCFGFNRHGQCGADPSNLPIVPQPRLVSQL--------- 261
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
R V IACG HS + + G + + WG
Sbjct: 262 ----------------RRRVASIACGRHHSLAILNDGNV--YSWG 288
>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
II]
Length = 487
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 130/339 (38%), Gaps = 57/339 (16%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V +WG G K +SP P + G + CG ++ A + SG LI WG
Sbjct: 10 VVVWGSTEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYG 69
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
G L G + P + +V++ A H ++ GE+YTWG C + K
Sbjct: 70 ---GCGQLGFGNLEDCLVPRVNLSLKNVIQVACSDRHTAAILSNGELYTWG---CSKNGK 123
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-------- 190
+ G F+ + + P + ++ + T ++ +
Sbjct: 124 LGH-----GQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGL 178
Query: 191 --NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
GD +P L+ G+ I +++ GG HT IL G+++ +G G G+LG GS
Sbjct: 179 QGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGS 238
Query: 249 RIKMVPTPHL-------IPCLEHAASGKDRPLLVRQGSVNSSGKAGR------------- 288
V P L I + + + + + G V + G+ GR
Sbjct: 239 -TDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQGGRLGHIFNGPEHDFL 297
Query: 289 ----------SYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+++ +I+CG HS ++D G + T WG+
Sbjct: 298 SPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYT--WGM 334
>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
Length = 1058
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 24/126 (19%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G + T P L+ I ++ G RH+L LSD GQV WG GQLG + ++V
Sbjct: 73 GHDLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQ 132
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
P ++ R L+ + V +IACG HS +T G L ++G
Sbjct: 133 LPKVV-----------RQLVTKT-------------VVQIACGNNHSLALTSCGELYSWG 168
Query: 315 WGLYGQ 320
+YGQ
Sbjct: 169 SNIYGQ 174
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 78/298 (26%), Positives = 115/298 (38%), Gaps = 65/298 (21%)
Query: 69 SGK-LITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
SGK L WGS GQ L G E TP P + +V + A G H + +T G+
Sbjct: 3 SGKELYCWGSTS-HGQLGL-GGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGK 60
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
VY G + D+ G D K+ L E D + R + +
Sbjct: 61 VYACG----------SNDYSQLG---HDLPTKRPLLIPEL---QDYVIIQICCGSRHSLA 104
Query: 185 AREESENPASGD------------EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
+ + + GD E L P +V + ++A G H+L L+ G+
Sbjct: 105 LSDWGQVLSWGDNDCGQLGHATDKEIVQL-PKVVRQLVTKTVVQIACGNNHSLALTSCGE 163
Query: 233 VWGWGYGGEGQLGLGSRIKM--------VPTPHLIPCLEHAASGKDRPLLVRQGSV---- 280
++ WG GQLG+ S + + T IP A G L+ + G+V
Sbjct: 164 LYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWG 223
Query: 281 -NSSGKAG------RSY-----------VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
N+ G+ G RSY V+ +ACG S +T+ G + T G G YGQ
Sbjct: 224 RNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281
Score = 43.5 bits (101), Expect = 0.13, Method: Composition-based stats.
Identities = 73/287 (25%), Positives = 106/287 (36%), Gaps = 76/287 (26%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVV 107
K V CG +LA + G+L +WGS + GQ + S H P +
Sbjct: 143 KTVVQIACGNNHSLALTSCGELYSWGS-NIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLA 201
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
A G H ++++G V+ WG C G G D T + + PT+
Sbjct: 202 AIACGGNHSFLISKSGAVFGWGRNNC----------GQLG--LNDETNR--SYPTQ---- 243
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEF----------FT----------------- 200
+K +T R A GDEF FT
Sbjct: 244 ---------LKTLRTLGVR----FVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNE 290
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLIL-SDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHL 258
+ P +V G IT+VA G RHTL L G+V+ +G G GQLG S + M+P +
Sbjct: 291 MLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVI 350
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P + + S + S+ +++I GG S V T
Sbjct: 351 GPWVSPSGS----------ALLQSNDSQVSLVIRQIFSGGDQSIVTT 387
Score = 42.7 bits (99), Expect = 0.22, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 33 PEKSPILSP-----IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
P K P+L P + ++C G +LA S+ G++++WG D + T
Sbjct: 77 PTKRPLLIPELQDYVIIQICCGSR----------HSLALSDWGQVLSWGDNDCGQLGHAT 126
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ + P+ +VV+ A G H +++T GE+Y+WG
Sbjct: 127 DKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWG 168
>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
Length = 1058
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 24/126 (19%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G + T P L+ I ++ G RH+L LSD GQV WG GQLG + ++V
Sbjct: 73 GHDLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQ 132
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
P ++ R L+ + V +IACG HS +T G L ++G
Sbjct: 133 LPKVV-----------RQLVTKT-------------VVQIACGNNHSLALTSCGELYSWG 168
Query: 315 WGLYGQ 320
+YGQ
Sbjct: 169 SNIYGQ 174
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 78/298 (26%), Positives = 115/298 (38%), Gaps = 65/298 (21%)
Query: 69 SGK-LITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
SGK L WGS GQ L G E TP P + +V + A G H + +T G+
Sbjct: 3 SGKELYCWGSTS-HGQLGL-GGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGK 60
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
VY G + D+ G D K+ L E D + R + +
Sbjct: 61 VYACG----------SNDYSQLG---HDLPTKRPLLIPEL---QDYVIIQICCGSRHSLA 104
Query: 185 AREESENPASGD------------EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
+ + + GD E L P +V + ++A G H+L L+ G+
Sbjct: 105 LSDWGQVLSWGDNDCGQLGHATDKEIVQL-PKVVRQLVTKTVVQIACGNNHSLALTSCGE 163
Query: 233 VWGWGYGGEGQLGLGSRIKM--------VPTPHLIPCLEHAASGKDRPLLVRQGSV---- 280
++ WG GQLG+ S + + T IP A G L+ + G+V
Sbjct: 164 LYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWG 223
Query: 281 -NSSGKAG------RSY-----------VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
N+ G+ G RSY V+ +ACG S +T+ G + T G G YGQ
Sbjct: 224 RNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281
Score = 43.5 bits (101), Expect = 0.13, Method: Composition-based stats.
Identities = 73/287 (25%), Positives = 106/287 (36%), Gaps = 76/287 (26%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVV 107
K V CG +LA + G+L +WGS + GQ + S H P +
Sbjct: 143 KTVVQIACGNNHSLALTSCGELYSWGS-NIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLA 201
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
A G H ++++G V+ WG C G G D T + + PT+
Sbjct: 202 AIACGGNHSFLISKSGAVFGWGRNNC----------GQLG--LNDETNR--SYPTQ---- 243
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEF----------FT----------------- 200
+K +T R A GDEF FT
Sbjct: 244 ---------LKTLRTLGVR----FVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNE 290
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLIL-SDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHL 258
+ P +V G IT+VA G RHTL L G+V+ +G G GQLG S + M+P +
Sbjct: 291 MLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVI 350
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P + + S + S+ +++I GG S V T
Sbjct: 351 GPWVSPSGS----------ALLQSNDSQVSLVIRQIFSGGDQSIVTT 387
Score = 42.7 bits (99), Expect = 0.22, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 33 PEKSPILSP-----IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
P K P+L P + ++C G +LA S+ G++++WG D + T
Sbjct: 77 PTKRPLLIPELQDYVIIQICCGSR----------HSLALSDWGQVLSWGDNDCGQLGHAT 126
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ + P+ +VV+ A G H +++T GE+Y+WG
Sbjct: 127 DKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWG 168
>gi|299116182|emb|CBN74531.1| similar to retinitis pigmentosa GTPase regulator [Ectocarpus
siliculosus]
Length = 983
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 22/119 (18%)
Query: 205 LVTLNP---GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
L L+P G ++ +VA GG H+ + +D G+V+ WG+ GQ G GS+ VP P L+
Sbjct: 140 LRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDL 199
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V G+V V ++ CG HSA+VT GAL T+G +G+
Sbjct: 200 SR-----------VTPGAVGE--------VPKVLCGRHHSALVTRGGALYTWGACSFGK 239
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 98/267 (36%), Gaps = 50/267 (18%)
Query: 11 NEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWK--DVCGGGCG--FALAT 66
N + E ++ WG G + P P +C +VC CG +A
Sbjct: 60 NHSILRTSEGKLFRWGVEDGD-------VHPFPTGVCTQIPLPCIEVC---CGRKHTVAL 109
Query: 67 SESGKLITWGSA--DDEGQSYLTSGKHGETPEPF-PLPTEASVVKAAAGWAHCVSVTEAG 123
+ G +++WG+ G S +H P VV+ A G H T+AG
Sbjct: 110 MKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSAVATDAG 169
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
V+TWG+ +G G+ KD+T + +L + + + GE K
Sbjct: 170 RVFTWGFNR----------YGQCGNGSKDNTVPEPSL-VDLSRVTPGAVGEVP----KVL 214
Query: 184 SAREESENPASGDEFFTLSPCL------------------VTLNPGVKITKVAAGGRHTL 225
R S G +T C VT + + AAG H +
Sbjct: 215 CGRHHSALVTRGGALYTWGACSFGKLGLQDAEKTVCIPQEVTFFSDKPLVQAAAGDFHMV 274
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKM 252
LS +V+ WGYG EGQ G GS + M
Sbjct: 275 ALSRKREVFSWGYGAEGQGGHGSLLHM 301
>gi|149701724|ref|XP_001494887.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Equus
caballus]
Length = 988
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 31/141 (21%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEH 264
G+KI +V+ G H+L LS+ GQV+ WG +GQLGLG +P IP +
Sbjct: 98 GIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLEGIPLAQV 157
Query: 265 AASGKDRPLLVRQGSV-----NSSGKAG--------RSY------------VKEIACGGR 299
AA G L G+ NS+G+ +SY V I+CG
Sbjct: 158 AAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIGALRNLGVIYISCGYE 217
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
H+AV+T G + TFG GQ
Sbjct: 218 HTAVLTQNGKVFTFGDNSCGQ 238
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 69/164 (42%), Gaps = 42/164 (25%)
Query: 182 TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
++S EE++NP TL +++ V+ G H+L + G+V+ WG G E
Sbjct: 27 SNSPLEETKNPEPIRTLETL-----------RVSLVSCGQEHSLAVCHRGRVFAWGAGSE 75
Query: 242 GQLGLGSRIKMVPTPHLIPCLE-----HAASGKDRPLLVRQGSV------NSSGKAG--- 287
GQLG G + TP I L + G L + +G NS G+ G
Sbjct: 76 GQLGTGEVKGINFTPKKIKTLTGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGK 135
Query: 288 -----------RSY----VKEIACGGRHSAVVTDAGALLTFGWG 316
RS + ++A GG HS ++ +G +FGWG
Sbjct: 136 EFPSQDSPQRVRSLEGIPLAQVAAGGAHSFALSVSGT--SFGWG 177
>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
Length = 4837
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 62/121 (51%), Gaps = 27/121 (22%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P LV V I KVA +GG+H L LS G+V+ WG G +G+LG G+R
Sbjct: 4012 APTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNR---------- 4061
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
DRP L+ +++ G V +IACG HSA +T G +LT+G G YG
Sbjct: 4062 -------DSYDRPKLIE--ALSGIG------VIDIACGSAHSACITSQGHVLTWGKGRYG 4106
Query: 320 Q 320
+
Sbjct: 4107 R 4107
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H + L+ G+V+ WG G +G+LG G+R+ + ++
Sbjct: 2979 VKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTL-----------------EK 3021
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ S + R V++IACG HSA +T +G L T+G G YG+
Sbjct: 3022 PKLIE------SLRTKR--VRDIACGSSHSAAITSSGELYTWGLGEYGR 3062
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 89/221 (40%), Gaps = 43/221 (19%)
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A ++ V+ +++ +++T GW C P +G +T ++P A +
Sbjct: 464 AGNYSTKVNKSKSQKIFTLGWSSCSPEM-----YGFMSEATNGTTQLMGSIPRYSAATIE 518
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL--------SPCLVTLNPGVKITKVAAG- 220
+ +V R+ + +G + F+L +P GV + ++AA
Sbjct: 519 LPSTLQV---RQVACTENNIYILTTGGQVFSLHSNSSENIAPKAFEGLEGVHVVQIAAHC 575
Query: 221 -GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
G+H ++LS +VW WG G G+LG G + K+ P ++
Sbjct: 576 EGKHVMVLSSANEVWSWGAGDGGRLGHGDTV-----------------SKEHPTMIV--- 615
Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V I CG +SA +T AG L T+G G YG+
Sbjct: 616 -----GLHEKQVCGIYCGASYSAAITIAGELFTWGRGTYGR 651
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F+LA ++SG++ TWG D + T +H P P V+ A G HC++
Sbjct: 3145 GAQFSLALTKSGEVWTWGKGDYYRLGHGTD-QHVRKPTPIQGLRGKKVIHVAVGALHCLA 3203
Query: 119 VTEAGEVYTWG 129
VT++G+VY WG
Sbjct: 3204 VTDSGQVYAWG 3214
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 115/314 (36%), Gaps = 83/314 (26%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
+P + PIL+ + K G A+A + GK+ +WG +D GK
Sbjct: 2967 TPRQVPILNQYVVK-------KVAVHSGGKHAMALTLDGKVFSWGEGED--------GKL 3011
Query: 92 G-------ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
G E P+ V A G +H ++T +GE+YTWG E +G
Sbjct: 3012 GHGNRLTLEKPKLIESLRTKRVRDIACGSSHSAAITSSGELYTWGLGE----------YG 3061
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV------KRRKTSSAREESENPASGD-E 197
G + K + T Q G VV + +T EE + GD +
Sbjct: 3062 RLGHGDNCTQLKPKLVTTLQ--------GHRVVQVACGSRDAQTLCLTEEGLVFSWGDGD 3113
Query: 198 FFTL---------SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
F L P V V + ++ G + +L L+ G+VW WG G +LG G+
Sbjct: 3114 FGKLGRGGSEGCSVPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGT 3173
Query: 249 RIKM-VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA 307
+ PTP G G+ + +A G H VTD+
Sbjct: 3174 DQHVRKPTP-------------------------IQGLRGKKVI-HVAVGALHCLAVTDS 3207
Query: 308 GALLTFGWGLYGQR 321
G + +G +GQ+
Sbjct: 3208 GQVYAWGDNDHGQQ 3221
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 79/222 (35%), Gaps = 66/222 (29%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
L G + CG G L ++ + +WG D Y G+ G P+ E+
Sbjct: 4125 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKIPMKIESL 4179
Query: 105 ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
V+K G V++T +G VYTWG G + + G
Sbjct: 4180 AGLGVIKVECGSQFSVALTRSGSVYTWG----------------KGDYHRLGHG------ 4217
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
+ V+R K +A + G KI +A G
Sbjct: 4218 -----------NTDHVRRPKKVAALQ-----------------------GKKIISIATGS 4243
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
H + SD G+V+ WG EGQLG G+ + + P L+ L+
Sbjct: 4244 LHCVACSDSGEVFTWGDNDEGQLGDGT-VTAIQRPRLVQSLQ 4284
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 40 SPIPARLCGGDSWKDV--CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
SPIP ++ D+ +V G F++A S G L TWG G+ + +H P+
Sbjct: 714 SPIPVQI---DTLVNVSRIYSGSQFSVALSCDGTLYTWGKGHG-GRLGHGNSEHSNVPKL 769
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WRECVPSAKVTRD 142
+ A G AHC+++T +GE+Y WG +++ PS V+RD
Sbjct: 770 VRALEGKKIADVAVGSAHCLALTSSGELYGWGRNDYQQICPSG-VSRD 816
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 86/221 (38%), Gaps = 61/221 (27%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK--HGETPEPFPLPTEASVVK 108
K VCG CG ++ A + +G+L TWG T G+ HG + + +PT+ +K
Sbjct: 620 KQVCGIYCGASYSAAITIAGELFTWGRG--------TYGRLGHGNSDDKL-VPTQVQALK 670
Query: 109 A--------AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
+ +G AH + VT+ G ++ WG DFG G + + S +
Sbjct: 671 SYKVVDVALGSGDAHSMCVTDNGLLFAWG----------DGDFGKLG----NGSCNGSPI 716
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT-----------------LSP 203
P + + +V + S + S + +T P
Sbjct: 717 PVQI---------DTLVNVSRIYSGSQFSVALSCDGTLYTWGKGHGGRLGHGNSEHSNVP 767
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
LV G KI VA G H L L+ G+++GWG Q+
Sbjct: 768 KLVRALEGKKIADVAVGSAHCLALTSSGELYGWGRNDYQQI 808
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 81/224 (36%), Gaps = 51/224 (22%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEV++WG R+ K+ G
Sbjct: 4027 VAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSA 4086
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
SA T Q V+ K R GD L P LV G +
Sbjct: 4087 HSACITSQG---------HVLTWGKGRYGR-----LGHGDSEDQLQPKLVEALLGYRAID 4132
Query: 217 VA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLL 274
+A +G TL ++D VW WG G G+LG G + G P+
Sbjct: 4133 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG-----------------GSDGCKIPMK 4175
Query: 275 VRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ AG +K + CG + S +T +G++ T+G G Y
Sbjct: 4176 IE-------SLAGLGVIK-VECGSQFSVALTRSGSVYTWGKGDY 4211
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 25/92 (27%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G K+ VA G H L ++D GQV+ WG GQ G G+ + + P+L+ L+
Sbjct: 3188 GKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTV-VNKKPNLVLGLDGV----- 3241
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
+V +ACG HS
Sbjct: 3242 -------------------FVNRVACGSSHSV 3254
>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
Length = 487
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 129/336 (38%), Gaps = 55/336 (16%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V +WG G K +SP P + G + CG ++ A + SG LI WG
Sbjct: 10 VVVWGSSEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYG 69
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
G L G + P + +VV+ A H ++ GE+YTWG C + K
Sbjct: 70 ---GCGQLGFGNLEDCLVPRVNLSLKNVVQVACSDRHTAAILSNGELYTWG---CSKNGK 123
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-------- 190
+ G F+ + + P + ++ + T ++ +
Sbjct: 124 LGH-----GQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGL 178
Query: 191 --NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
GD +P L+ G+ I +++ GG HT IL G+++ +G G G+LG GS
Sbjct: 179 QGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGS 238
Query: 249 RIKMVPTPHL-------IPCLEHAASGKDRPLLVRQGSVNSSGKAGR------------- 288
V P L I + + + + + G V + G+ GR
Sbjct: 239 T-DDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQGGRLGHIFNGPEHDFL 297
Query: 289 ----------SYVKEIACGGRHSAVVTDAGALLTFG 314
+++ +I+CG HS ++D G + T+G
Sbjct: 298 SPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWG 333
>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
Length = 4733
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 58/123 (47%), Gaps = 27/123 (21%)
Query: 200 TLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
L P L+ V I K+A +GG+H L LS V+ WG G +G+LG G+R+ TP
Sbjct: 3943 VLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLA-CETPK 4001
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
LI L+ + +IACGG HSA +T G L T+G G
Sbjct: 4002 LIEALQGYE------------------------IIDIACGGAHSAAITSTGQLYTWGKGR 4037
Query: 318 YGQ 320
YG+
Sbjct: 4038 YGR 4040
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 27/110 (24%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+K V +GG+H + L+ G+V+ WG G +G+LG G+R+ + D+
Sbjct: 2981 IKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNL-----------------DK 3023
Query: 272 PLLVRQGSVNSSGKAGRS-YVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P ++ +A RS +++IACG HSA +T +G L T+G G YG+
Sbjct: 3024 PKMI---------EALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGR 3064
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 109/268 (40%), Gaps = 46/268 (17%)
Query: 18 KETVVYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESG 70
K+ VY WG G TS ++ P L I A L G D CGG ++ A S +G
Sbjct: 532 KDYEVYSWGNGDGGRLGHGDTSTKEEPTL--IQA-LKGKDIIDVECGGT--YSAAISANG 586
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG--WAHCVSVTEAGEVYTW 128
L TWG + G+ + + TP ++ ++K A G +AH + +T G+VY+W
Sbjct: 587 ALYTWGRGN-YGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSW 645
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
G D+G G D S LP + + + + + + E+
Sbjct: 646 G----------DGDYGKLGRGGSDG----SKLPRLIEKLQNVKIVQVYCGAQFSVALSED 691
Query: 189 SE-------------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+P + F P +V + K+ V+ G H L L+D G+V+G
Sbjct: 692 GHVYTWGKGEGWKLGHPTEENVRF---PEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYG 748
Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
WG Q+ S + V P LI L+
Sbjct: 749 WGKNENKQICDSSEL-FVQQPRLIEALK 775
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 116/315 (36%), Gaps = 60/315 (19%)
Query: 22 VYMWGY-----LPGT--SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
V++WG L G S K P+ S ++L W GG S GKL
Sbjct: 2896 VFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQL-----WPIHIAGGSKSLFIVSHEGKLYA 2950
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEAGEVYTWGWRE 132
G + G+ L + P P P ++ + K A +G H +++T G+V++WG E
Sbjct: 2951 CGEGTN-GRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGE 3009
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE----- 187
G D AL +++ D G +S+ E
Sbjct: 3010 -------DGKLGHGNRLNLDKPKMIEALRSKKI--RDIACGSS--HSAAITSSGELYTWG 3058
Query: 188 --ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGYGGEGQ 243
E GD L P L+ G +I +VA G R TL L+D G V+ WG G G+
Sbjct: 3059 LGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGK 3118
Query: 244 LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
LG G + PH I L V +I CG + S
Sbjct: 3119 LGRGGS-EGCNIPHNIERLNALE------------------------VVQIECGAQFSLA 3153
Query: 304 VTDAGALLTFGWGLY 318
+T G + T+G G Y
Sbjct: 3154 LTKTGEVWTWGKGDY 3168
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 107/278 (38%), Gaps = 66/278 (23%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
A+A + GK+ +WG +D G+ + + + P+ + A G +H ++T +
Sbjct: 2993 AMALTLDGKVFSWGEGED-GKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSS 3051
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
GE+YTWG E +G G + K + + G +V+
Sbjct: 3052 GELYTWGLGE----------YGRLGHGDNITQLKPKLIKS--------LVGHRIVQ---V 3090
Query: 183 SSAREESENPASGDEFFTLS-------------------PCLVTLNPGVKITKVAAGGRH 223
+ +++ A DE + S P + +++ ++ G +
Sbjct: 3091 ACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQF 3150
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
+L L+ G+VW WG G +LG GS + V P +I L KD+ ++
Sbjct: 3151 SLALTKTGEVWTWGKGDYFRLGHGSD-QHVRKPTVIESL------KDKKVI--------- 3194
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQR 321
+A G H VTD G + +G +GQ+
Sbjct: 3195 ---------HVAVGALHCLAVTDTGQVYAWGDNDHGQQ 3223
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
G F+LA +++G++ TWG D Y G +H P + V+ A G
Sbjct: 3147 GAQFSLALTKTGEVWTWGKGD-----YFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGAL 3201
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+ G+VY WG
Sbjct: 3202 HCLAVTDTGQVYAWG 3216
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + T G+H P+ ++ A G HCV+
Sbjct: 4123 GSQFSVALTRSGSVYTWGKGDYHRLGHGT-GEHVRRPKKVAALQGKKIISIATGSLHCVA 4181
Query: 119 VTEAGEVYTWG 129
++ GEV+TWG
Sbjct: 4182 CSDEGEVFTWG 4192
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 29/113 (25%)
Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAAS 267
G+ + K+AA G+H L L+ +V+ WG G G+LG G + K PT L A
Sbjct: 512 GINMIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPT------LIQALK 565
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
GKD + ++ CGG +SA ++ GAL T+G G YG+
Sbjct: 566 GKD--------------------IIDVECGGTYSAAISANGALYTWGRGNYGR 598
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 73/212 (34%), Gaps = 66/212 (31%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G P E+ V+K
Sbjct: 4068 CGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKVPKKIESLAGLGVIKVEC 4122
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G V++T +G VYTWG G + + G
Sbjct: 4123 GSQFSVALTRSGSVYTWG----------------KGDYHRLGHG---------------- 4150
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
GE V + +K ++ + G KI +A G H + SD G
Sbjct: 4151 TGEHVRRPKKVAALQ------------------------GKKIISIATGSLHCVACSDEG 4186
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
+V+ WG EGQLG + P L+ L+
Sbjct: 4187 EVFTWGDNDEGQLG-DDTTNAIQRPRLVSALQ 4217
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 25/89 (28%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
K+ VA G H L ++D GQV+ WG GQ G G+ I + P L+ LE
Sbjct: 3192 KVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTI-VNRKPALVHGLEDV------- 3243
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
++ +ACG HS
Sbjct: 3244 -----------------HINRVACGSSHS 3255
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 201 LSPCLVTLNPGVKITKVAAGG--RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
L+P +++ I KVA G HTL ++ G+V+ WG G G+LG G
Sbjct: 608 LTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRG----------- 656
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
+ G P L+ K + ++ CG + S +++ G + T+G G
Sbjct: 657 ------GSDGSKLPRLIE--------KLQNVKIVQVYCGAQFSVALSEDGHVYTWGKG 700
>gi|56753337|gb|AAW24872.1| SJCHGC03307 protein [Schistosoma japonicum]
Length = 277
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 107/262 (40%), Gaps = 44/262 (16%)
Query: 66 TSESGKLITWGSADD-EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
TS + L WGS +D + S T + TP+ + V+ + G+ H V +T GE
Sbjct: 2 TSPTEDLFVWGSCEDGQLTSDNTDTFNVLTPKALNVQNLPEFVQISCGYTHTVFLTIDGE 61
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKD-STGKQSALPTEQ----APPSDKRAGEEVVKR 179
VY+ G E F G Q GK +AL + A + A
Sbjct: 62 VYSCGCNE----------FQQLGHRQSGGRLGKVAALEQYRIISVACGAYHNAAVTYSGL 111
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
T + GD+ + LV ++ +V+ G HTL+L+D +V+ +G
Sbjct: 112 LFTWGCNSNGQLGREGDD---TAVKLVRALSDHRVVQVSLGVEHTLVLTDTARVFAFGSN 168
Query: 240 GEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
+GQLGLG S + VP P I CL SG ++ I GG
Sbjct: 169 LKGQLGLGFSSEQPVPIPQQILCL--------------------SGLP----IRRITAGG 204
Query: 299 RHSAVVTDAGALLTFGWGLYGQ 320
HS V+T +G+L +G YGQ
Sbjct: 205 WHSFVLTVSGSLYAWGSNKYGQ 226
>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
Length = 306
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 62/127 (48%), Gaps = 25/127 (19%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-V 253
GDE P LV G + +V+ G +HT IL + G+V+ +G G GQLG G+ + V
Sbjct: 22 GDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGRGNFGQLGQGASVTANV 81
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
TP L+ L+ GK +VK++ACG H+ + D G L T+
Sbjct: 82 STPALVSALQ----GK--------------------HVKQVACGWHHTCALIDNGQLYTW 117
Query: 314 GWGLYGQ 320
G G YG+
Sbjct: 118 GSGEYGR 124
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 25/119 (21%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P LV+ G + +VA G HT L D GQ++ WG G G+LG G ++ +P L+
Sbjct: 83 TPALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYGRLGHGDEVRQ-ASPKLVES 141
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
L+ GK+ V +A GG HS+V+ + G LLT+G G +GQ
Sbjct: 142 LQ----GKE--------------------VTFVAAGGFHSSVIIEGGNLLTWGGGYFGQ 176
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 97/254 (38%), Gaps = 51/254 (20%)
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ 164
+V + + G H + E GEV+T+G +FG G Q S + P
Sbjct: 40 NVRQVSCGNQHTAILMENGEVFTFG----------RGNFGQLG--QGASVTANVSTPALV 87
Query: 165 APPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKI 214
+ K + T + + + GDE SP LV G ++
Sbjct: 88 SALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYGRLGHGDEVRQASPKLVESLQGKEV 147
Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP----CLEH-AASGK 269
T VAAGG H+ ++ + G + WG G GQLG G TP ++ C+ H A G
Sbjct: 148 TFVAAGGFHSSVIIEGGNLLTWGGGYFGQLGHGDETDR-KTPKMVKGVQQCIAHEVACGT 206
Query: 270 DRPLLVRQGS---VNSSGKAGR--------------------SYVKEIACGGRHSAVVTD 306
L++ Q SG+ G+ V I+ GG HSA +T
Sbjct: 207 HHTLMLTQSQEVWTWGSGEFGKLGIGDEEKHAEPIMITALQGVGVIHISTGGFHSAALTS 266
Query: 307 AGALLTFGWGLYGQ 320
G L T+G G GQ
Sbjct: 267 EGVLYTWGGGDKGQ 280
Score = 44.3 bits (103), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 75/201 (37%), Gaps = 37/201 (18%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVT 120
A ++G+L TWGS + Y G E + P E+ V AAG H +
Sbjct: 107 ALIDNGQLYTWGSGE-----YGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVII 161
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR--AGEEVVK 178
E G + TWG G F + G ++ T + ++ A E
Sbjct: 162 EGGNLLTWG----------------GGYFGQLGHGDETDRKTPKMVKGVQQCIAHEVACG 205
Query: 179 RRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
T + E GDE P ++T GV + ++ GG H+ L+
Sbjct: 206 THHTLMLTQSQEVWTWGSGEFGKLGIGDEEKHAEPIMITALQGVGVIHISTGGFHSAALT 265
Query: 229 DMGQVWGWGYGGEGQLGLGSR 249
G ++ WG G +GQLG G
Sbjct: 266 SEGVLYTWGGGDKGQLGHGDE 286
>gi|296189286|ref|XP_002742716.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Callithrix jacchus]
Length = 556
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 91/231 (39%), Gaps = 34/231 (14%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL K C G G LAT+E G++ TWG S L +G P
Sbjct: 94 PRRLDSLSGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 149
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG + ++G ST
Sbjct: 150 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTVN 196
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLV 206
Q +K + + + E G+ +PC V
Sbjct: 197 QPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRV 256
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 257 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 307
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + PTP +
Sbjct: 145 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PTPRRV 203
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 204 TGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 263
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 264 VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 293
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + P P R+ G K V CG +A +SG++ WG
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGY- 236
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 237 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 86 GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 140
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 141 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 180
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 181 WGYNNSGQ 188
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 146 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPTPRR 202
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V ++GEVY WG+
Sbjct: 203 VTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYN 237
>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 3894
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 58/123 (47%), Gaps = 27/123 (21%)
Query: 200 TLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
L P L+ V I K+A +GG+H L LS V+ WG G +G+LG G+R+ TP
Sbjct: 3104 VLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLA-CETPK 3162
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
LI L+ + +IACGG HSA +T G L T+G G
Sbjct: 3163 LIEALQGYE------------------------IIDIACGGAHSAAITSTGQLYTWGKGR 3198
Query: 318 YGQ 320
YG+
Sbjct: 3199 YGR 3201
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 27/110 (24%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+K V +GG+H + L+ G+V+ WG G +G+LG G+R+ + D+
Sbjct: 2142 IKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNL-----------------DK 2184
Query: 272 PLLVRQGSVNSSGKAGRS-YVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P ++ +A RS +++IACG HSA +T +G L T+G G YG+
Sbjct: 2185 PKMI---------EALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGR 2225
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 116/315 (36%), Gaps = 60/315 (19%)
Query: 22 VYMWGY-----LPGT--SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
V++WG L G S K P+ S ++L W GG S GKL
Sbjct: 2057 VFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQL-----WPIHIAGGSKSLFIVSHEGKLYA 2111
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEAGEVYTWGWRE 132
G + G+ L + P P P ++ + K A +G H +++T G+V++WG E
Sbjct: 2112 CGEGTN-GRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGE 2170
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE----- 187
G D AL +++ D G +S+ E
Sbjct: 2171 -------DGKLGHGNRLNLDKPKMIEALRSKKI--RDIACGSS--HSAAITSSGELYTWG 2219
Query: 188 --ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGYGGEGQ 243
E GD L P L+ G +I +VA G R TL L+D G V+ WG G G+
Sbjct: 2220 LGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGK 2279
Query: 244 LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
LG G + PH I L V +I CG + S
Sbjct: 2280 LGRGGS-EGCNIPHNIERLNALE------------------------VVQIECGAQFSLA 2314
Query: 304 VTDAGALLTFGWGLY 318
+T G + T+G G Y
Sbjct: 2315 LTKTGEVWTWGKGDY 2329
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 107/278 (38%), Gaps = 66/278 (23%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
A+A + GK+ +WG +D G+ + + + P+ + A G +H ++T +
Sbjct: 2154 AMALTLDGKVFSWGEGED-GKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSS 2212
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
GE+YTWG E +G G + K + + G +V+
Sbjct: 2213 GELYTWGLGE----------YGRLGHGDNITQLKPKLIKS--------LVGHRIVQ---V 2251
Query: 183 SSAREESENPASGDEFFTLS-------------------PCLVTLNPGVKITKVAAGGRH 223
+ +++ A DE + S P + +++ ++ G +
Sbjct: 2252 ACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQF 2311
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
+L L+ G+VW WG G +LG GS + V P +I L KD+ ++
Sbjct: 2312 SLALTKTGEVWTWGKGDYFRLGHGSD-QHVRKPTVIESL------KDKKVI--------- 2355
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQR 321
+A G H VTD G + +G +GQ+
Sbjct: 2356 ---------HVAVGALHCLAVTDTGQVYAWGDNDHGQQ 2384
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
G F+LA +++G++ TWG D Y G +H P + V+ A G
Sbjct: 2308 GAQFSLALTKTGEVWTWGKGD-----YFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGAL 2362
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+ G+VY WG
Sbjct: 2363 HCLAVTDTGQVYAWG 2377
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + T G+H P+ ++ A G HCV+
Sbjct: 3284 GSQFSVALTRSGSVYTWGKGDYHRLGHGT-GEHVRRPKKVAALQGKKIISIATGSLHCVA 3342
Query: 119 VTEAGEVYTWG 129
++ GEV+TWG
Sbjct: 3343 CSDEGEVFTWG 3353
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 73/212 (34%), Gaps = 66/212 (31%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G P E+ V+K
Sbjct: 3229 CGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKVPKKIESLAGLGVIKVEC 3283
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G V++T +G VYTWG G + + G
Sbjct: 3284 GSQFSVALTRSGSVYTWG----------------KGDYHRLGHG---------------- 3311
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
GE V + +K ++ + G KI +A G H + SD G
Sbjct: 3312 TGEHVRRPKKVAALQ------------------------GKKIISIATGSLHCVACSDEG 3347
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
+V+ WG EGQLG + P L+ L+
Sbjct: 3348 EVFTWGDNDEGQLG-DDTTNAIQRPRLVSALQ 3378
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 25/89 (28%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
K+ VA G H L ++D GQV+ WG GQ G G+ I + P L+ LE
Sbjct: 2353 KVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTI-VNRKPALVHGLEDV------- 2404
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
++ +ACG HS
Sbjct: 2405 -----------------HINRVACGSSHS 2416
>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
Length = 1058
Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G + T P L+ I +++ G RH+L LSD GQV WG GQLG + ++V
Sbjct: 73 GHDLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQ 132
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
P ++ R L+ + V +IACG HS +T G L ++G
Sbjct: 133 LPKVV-----------RQLVSKT-------------VVQIACGNNHSLALTSCGELYSWG 168
Query: 315 WGLYGQ 320
+YGQ
Sbjct: 169 SNIYGQ 174
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 70/290 (24%), Positives = 111/290 (38%), Gaps = 44/290 (15%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA S+ G++++WG D + T + + P+ +VV+ A G H ++
Sbjct: 98 GSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLA 157
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA--GEEV 176
+T GE+Y+WG + + G L T P A G
Sbjct: 158 LTSCGELYSWG-------SNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHS 210
Query: 177 VKRRKTSS----AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
K+ + R DE P + + + VA G ++ L++ G
Sbjct: 211 FLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGG 270
Query: 233 VWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
V+ G G GQLG G S +M+P R ++ GS +
Sbjct: 271 VFTCGAGAYGQLGHGFSSNEMLP----------------RMVMELMGST----------I 304
Query: 292 KEIACGGRHS-AVVTDAGALLTFGWGLYGQ---RMAKCLAGDGINMGSWV 337
++ACG RH+ A+V G + FG G GQ R K L + +G WV
Sbjct: 305 TQVACGNRHTLALVPSRGKVYAFGLGSSGQLGTRSTKSLMLPQVVIGPWV 354
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 76/298 (25%), Positives = 115/298 (38%), Gaps = 65/298 (21%)
Query: 69 SGK-LITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
SGK L WGS GQ L G E TP P + +V + A G H + +T G+
Sbjct: 3 SGKELYCWGSTS-HGQLGL-GGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGK 60
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
VY G + D+ G T + +P Q D + R + +
Sbjct: 61 VYACG----------SNDYSQLG--HDLPTKRPQLIPELQ----DYVIIQISCGSRHSLA 104
Query: 185 AREESENPASGD------------EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
+ + + GD E L P +V + ++A G H+L L+ G+
Sbjct: 105 LSDWGQVLSWGDNDCGQLGHATEKEIVQL-PKVVRQLVSKTVVQIACGNNHSLALTSCGE 163
Query: 233 VWGWGYGGEGQLGLGSRIKM--------VPTPHLIPCLEHAASGKDRPLLVRQGSV---- 280
++ WG GQLG+ S + + T IP A G L+ + G+V
Sbjct: 164 LYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWG 223
Query: 281 -NSSGKAG------RSY-----------VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
N+ G+ G R+Y V+ +ACG S +T+ G + T G G YGQ
Sbjct: 224 RNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281
Score = 46.6 bits (109), Expect = 0.018, Method: Composition-based stats.
Identities = 74/287 (25%), Positives = 107/287 (37%), Gaps = 76/287 (26%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVV 107
K V CG +LA + G+L +WGS + GQ + S H P +
Sbjct: 143 KTVVQIACGNNHSLALTSCGELYSWGS-NIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLA 201
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
A G H ++++G V+ WG C G G D T + A PT+
Sbjct: 202 AIACGGNHSFLISKSGAVFGWGRNNC----------GQLG--LNDETNR--AYPTQ---- 243
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEF----------FT----------------- 200
+K +T R A GDEF FT
Sbjct: 244 ---------LKTLRTLGVR----FVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNE 290
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLIL-SDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHL 258
+ P +V G IT+VA G RHTL L G+V+ +G G GQLG S + M+P +
Sbjct: 291 MLPRMVMELMGSTITQVACGNRHTLALVPSRGKVYAFGLGSSGQLGTRSTKSLMLPQVVI 350
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P + + S + + S+ +++I GG S V T
Sbjct: 351 GPWVSPSGSAQ----------LQSNDSQVSLVIRQIFSGGDQSIVTT 387
>gi|115485835|ref|NP_001068061.1| Os11g0545800 [Oryza sativa Japonica Group]
gi|113645283|dbj|BAF28424.1| Os11g0545800, partial [Oryza sativa Japonica Group]
Length = 400
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 112/292 (38%), Gaps = 59/292 (20%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYL--TSGKHGETPEPFPL 100
P + G D G + A + GKL WG + GQ L +GK TP
Sbjct: 92 PIEVSGFDEKVVEVSAGNHHSCAVTADGKLFAWGR-NSSGQLGLGKRAGKVVSTPRKVDC 150
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
+A V A G H ++ TE GEV +WG G G K S S
Sbjct: 151 LADARVKMVALGSEHSIATTEEGEVLSWG----------AAGAGRLGHGHKTSILGFSIT 200
Query: 161 PTEQAPPSDKRAGEEVVKRRKTS----------------SAREESENPASGDEFFTLSPC 204
+E P K +KR + E SGDE L P
Sbjct: 201 TSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQKTEKGFGRSGDE---LRPT 257
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
+V P + +VA GG HT +++D G ++ WG G LGLG MV +P ++
Sbjct: 258 VVEEVPFSE--EVACGGYHTCVVTDSGDLYSWGSNENGCLGLGG-TDMVRSPEVLK---- 310
Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
+S P V +++CG +H+AV++ G + T+GWG
Sbjct: 311 -SSLFKFP------------------VSKVSCGWKHTAVIS-GGDIYTWGWG 342
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 116/301 (38%), Gaps = 96/301 (31%)
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP-TEASVVKAAAGWAHCVSVTEAGEV 125
+ESG++ G +D GQ + S + EP + + VV+ +AG H +VT G++
Sbjct: 64 TESGRVFAAG-LNDFGQLGIGSSVT-HSLEPIEVSGFDEKVVEVSAGNHHSCAVTADGKL 121
Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA 185
+ WG ++S+G+ KRAG+ V RK
Sbjct: 122 FAWG---------------------RNSSGQLGL---------GKRAGKVVSTPRKVD-- 149
Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
CL ++ VA G H++ ++ G+V WG G G+LG
Sbjct: 150 ------------------CLAD----ARVKMVALGSEHSIATTEEGEVLSWGAAGAGRLG 187
Query: 246 LGSRIKMV--------PTPHLIPCLE------------HAASGKDRPLLVRQGSVNSSGK 285
G + ++ TP LI L+ H+A ++ L G G
Sbjct: 188 HGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQKTEKG- 246
Query: 286 AGRS-------------YVKEIACGGRHSAVVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
GRS + +E+ACGG H+ VVTD+G L + +G CL G +
Sbjct: 247 FGRSGDELRPTVVEEVPFSEEVACGGYHTCVVTDSGDLYS-----WGSNENGCLGLGGTD 301
Query: 333 M 333
M
Sbjct: 302 M 302
>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
Length = 1058
Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats.
Identities = 75/322 (23%), Positives = 117/322 (36%), Gaps = 58/322 (18%)
Query: 60 CGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG L + +GK+ GS D S L + P+ P + +++ + G H +
Sbjct: 47 CGHRHTLFLTATGKVYACGSND---YSQLGHDLPTKRPQLIPELQDYVIIQISCGSRHSL 103
Query: 118 SVTEAGEVYTWGWREC-----------VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
++++ G+V +WG +C V KV R S Q S T
Sbjct: 104 ALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGE 163
Query: 167 PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
G + + +S + + P +T G+ + +A GG H+ +
Sbjct: 164 LYS--WGSNIYGQLGVNSPNDLTH---------CNYPLRLTTLLGIPLAAIACGGNHSFL 212
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC----LEHAASGKD-RPLLVRQGSVN 281
+S G V+GWG GQLGL L + AA G + L +G V
Sbjct: 213 ISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFAACGDEFSVFLTNEGGVF 272
Query: 282 SSGKAGR----------------------SYVKEIACGGRHS-AVVTDAGALLTFGWGLY 318
+ G S + ++ACG RH+ A V G + FG G
Sbjct: 273 TCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLAFVPSRGKVYAFGLGSS 332
Query: 319 GQ---RMAKCLAGDGINMGSWV 337
GQ R K L + +G WV
Sbjct: 333 GQLGTRSTKSLMLPQVVIGPWV 354
>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4628
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 25/112 (22%)
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
N VK V +GGRH + L+ G+V+ WG G +G+LG SR+
Sbjct: 2815 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNC---------------- 2858
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
D+P L+ + KA R +++IACG HSA +T +G L ++G G YG+
Sbjct: 2859 -DKPRLIE------ALKAKR--IRDIACGSSHSAAITSSGELYSWGLGEYGR 2901
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 3832 TPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 3882
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V +IA GG HSA +T +G L T+G G Y
Sbjct: 3883 PC--------DRPRVI---------ESLRGVEVVDIAAGGAHSACITASGELFTWGKGRY 3925
Query: 319 GQ 320
G+
Sbjct: 3926 GR 3927
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 57/123 (46%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P L+ K+ K+AA G+H L LS G+V+ WG G G+LG G + P
Sbjct: 444 TLAPMLIHSLSSRKMVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGD-TTYLEEPT 502
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I +GK +V IACG +SA +T G L T+G G
Sbjct: 503 MIAAF--------------------NGKQAGKHVVHIACGSTYSAAITVDGELYTWGRGN 542
Query: 318 YGQ 320
YG+
Sbjct: 543 YGR 545
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ ++ K G A+A + GK+ +WG DD G+ S + + P
Sbjct: 2805 PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 2863
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+Y+WG E +G G D+T
Sbjct: 2864 IEALKAKRIRDIACGSSHSAAITSSGELYSWGLGE----------YGRLG--HGDNT--- 2908
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 2909 ----TQLRPKLVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2961
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG G+ + V P
Sbjct: 2962 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH-VRKPQ 3020
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD G + +G
Sbjct: 3021 MV-----------------------EGLRGKKIV-HVAVGALHCLAVTDTGQVYAWGDND 3056
Query: 318 YGQR 321
+GQ+
Sbjct: 3057 HGQQ 3060
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
D+ CG F++A ++ G++ TWG D++ + T +H P+ VV A
Sbjct: 621 DIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD-EHVRFPKLLDTLQGKKVVDVAV 679
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++T+ GEV++WG
Sbjct: 680 GSTHCLALTDDGEVHSWG 697
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 109/280 (38%), Gaps = 61/280 (21%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
GG A + GK+ G A T+G+ G + P+P + + VVK
Sbjct: 2769 AGGSKSLFAVTVEGKIYACGEA--------TNGRLGLGLSSGTIPIPRQITALSNYVVKK 2820
Query: 110 AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
A G H +++T G+V++WG D G G F + + K + +A
Sbjct: 2821 VAVHSGGRHAMALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKAK 2870
Query: 167 PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
A TSS E GD L P LV + G ++ +VA G
Sbjct: 2871 RIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACG 2930
Query: 221 GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
R TL L+D G V+ WG G G+LG G + G + P + +
Sbjct: 2931 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 2972
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+N G V +I CG + S +T +G + T+G G Y
Sbjct: 2973 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDY 3005
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 109/277 (39%), Gaps = 72/277 (25%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAA--GWAHCVSV 119
+ SE G LI S Q+Y ++ T P + + +S +VK AA H +++
Sbjct: 419 IVCSEKGFLILSSSGAVYTQNYKST-----TLAPMLIHSLSSRKMVKLAAHPDGQHYLAL 473
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSF-QKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+ GEV++WG C G G D+T + PT A + K+AG+ VV
Sbjct: 474 SSNGEVFSWG---C----------GDGGRLGHGDTTYLEE--PTMIAAFNGKQAGKHVVH 518
Query: 179 RRKTSSAREESENPASGDEFFT-----------------LSPCLVTLNPGVKITKVA--A 219
+ S E +T +P LVT G+K+ VA +
Sbjct: 519 ---IACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGS 575
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
G TL +++ GQVW WG G G+LG G + G P LV
Sbjct: 576 GDAQTLAVTENGQVWSWGDGDYGKLGRG-----------------GSDGCKTPKLVE--- 615
Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
K + ++ CG + S +T G + T+G G
Sbjct: 616 -----KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKG 647
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAA 111
CG G LA +E+G++ +WG D Y G+ G +TP+ + +VK
Sbjct: 573 CGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKTPKLVEKLQDLDIVKVCC 627
Query: 112 GWAHCVSVTEAGEVYTWG 129
G V++T+ G+VYTWG
Sbjct: 628 GSQFSVALTKDGQVYTWG 645
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3011 GTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT 3064
Score = 38.1 bits (87), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 31/138 (22%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-HAA--- 266
GV++ +AAGG H+ ++ G+++ WG G G+LG G + P L+ L+ H
Sbjct: 3895 GVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQL-KPKLVDALQGHRVIDV 3953
Query: 267 ---SGKDRPLLVRQGSV------NSSGKAGRS-----------------YVKEIACGGRH 300
SG + L + + GK GR V ++ CG +
Sbjct: 3954 ACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKTPMKIDSLTGLGVIKVECGSQF 4013
Query: 301 SAVVTDAGALLTFGWGLY 318
S +T +GA+ T+G G Y
Sbjct: 4014 SVALTKSGAVYTWGKGDY 4031
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 3857 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHS 3908
Query: 117 VSVTEAGEVYTWG 129
+T +GE++TWG
Sbjct: 3909 ACITASGELFTWG 3921
>gi|397488796|ref|XP_003815430.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Pan
paniscus]
Length = 815
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 26/119 (21%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P LV+ P K+ +VA GG HT++L++ V+ +G G GQLGLG+ + P +I
Sbjct: 234 TPQLVSEIPE-KVIQVACGGEHTVVLTE-NAVYTFGLGQFGQLGLGTFLFETSEPKVIEN 291
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +D+ + SY I+CG H+A++TD G + TFG G +G+
Sbjct: 292 I------RDQTI---------------SY---ISCGENHTALITDIGLMYTFGDGRHGK 326
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 54/139 (38%), Gaps = 31/139 (22%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
C+ L P K+ A G HTL+ ++ G V+ G EGQLGLG I +
Sbjct: 80 CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
H I L +A L G + NS G+ G V I+
Sbjct: 139 EHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWIS 196
Query: 296 CGGRHSAVVTDAGALLTFG 314
CG HSA VT G L FG
Sbjct: 197 CGYYHSAFVTTDGELYVFG 215
>gi|62898714|dbj|BAD97211.1| retinitis pigmentosa GTPase regulator variant [Homo sapiens]
Length = 815
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 26/119 (21%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P LV+ P K+ +VA GG HT++L++ V+ +G G GQLGLG+ + P +I
Sbjct: 234 TPQLVSEIPE-KVIQVACGGEHTVVLTE-NAVYTFGLGQFGQLGLGTFLFETSEPKVIEN 291
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +D+ + SY I+CG H+A++TD G + TFG G +G+
Sbjct: 292 I------RDQTI---------------SY---ISCGENHTALITDIGLMYTFGDGRHGK 326
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 54/139 (38%), Gaps = 31/139 (22%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
C+ L P K+ A G HTL+ ++ G V+ G EGQLGLG I +
Sbjct: 80 CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
H I L +A L G + NS G+ G V I+
Sbjct: 139 EHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWIS 196
Query: 296 CGGRHSAVVTDAGALLTFG 314
CG HSA VT G L FG
Sbjct: 197 CGYYHSAFVTTDGELYVFG 215
>gi|440796277|gb|ELR17386.1| regulator of chromosome condensation (RCC1) repeat domain containing
protein [Acanthamoeba castellanii str. Neff]
Length = 1595
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 109/261 (41%), Gaps = 49/261 (18%)
Query: 53 KDVCGGGC--GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP-FPLPTEA----S 105
+ V GC GF +A S SGK+ WGS+ + K T P P A
Sbjct: 1359 RRVIKVGCASGFNVALSRSGKVYGWGSS----SLFPLRTKDNRTATPGIPHTIRALKGKR 1414
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
VV A G H + +T GEVY+ G G G+ + +T Q P +
Sbjct: 1415 VVDVACGEHHVLFITGQGEVYSLGT-------------GVLGALGQGTTVDQLVEPKQIL 1461
Query: 166 PPSDKRA-----GEE---VVKRRKTSSAREESENPASG----DEFFTLSPCLVTLNPGVK 213
+ A GE V+ R + ++ G + T PC + +K
Sbjct: 1462 ALQKEHAVRAAAGENFSMVLTRDGVVYSFGAADKGQLGHPDPQDMPTGYPCPIDALAKIK 1521
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI--KMVP--TPHLIPCLEHAASGK 269
ITK+AAG +H + +S+ G+V+ WG GQLG + ++VP P +P ++ AA GK
Sbjct: 1522 ITKIAAGHQHAMAISEYGEVYLWGANDAGQLGFETEDDEQLVPRHLPFGLPVVD-AAGGK 1580
Query: 270 DRPLLVRQGSVNSSGKAGRSY 290
+++ Q AGR Y
Sbjct: 1581 SHTVIIDQ--------AGRVY 1593
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 55/127 (43%), Gaps = 14/127 (11%)
Query: 10 ENEKMEECKETVVYMWG-----YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFAL 64
EN M ++ VVY +G L P+ P P P + G A+
Sbjct: 1475 ENFSMVLTRDGVVYSFGAADKGQLGHPDPQDMPTGYPCPIDALAKIKITKIAAGH-QHAM 1533
Query: 65 ATSESGKLITWGSADDEGQ-SYLTSGKHGETPE--PFPLPTEASVVKAAAGWAHCVSVTE 121
A SE G++ WG A+D GQ + T P PF LP VV AA G +H V + +
Sbjct: 1534 AISEYGEVYLWG-ANDAGQLGFETEDDEQLVPRHLPFGLP----VVDAAGGKSHTVIIDQ 1588
Query: 122 AGEVYTW 128
AG VY W
Sbjct: 1589 AGRVYAW 1595
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 30/148 (20%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P + G ++ VA G H L ++ G+V+ G G G LG G+ + + P I L
Sbjct: 1404 PHTIRALKGKRVVDVACGEHHVLFITGQGEVYSLGTGVLGALGQGTTVDQLVEPKQILAL 1463
Query: 263 --EH---AASGKDRPL-LVRQGSVNSSGKAGRSY------------------------VK 292
EH AA+G++ + L R G V S G A + +
Sbjct: 1464 QKEHAVRAAAGENFSMVLTRDGVVYSFGAADKGQLGHPDPQDMPTGYPCPIDALAKIKIT 1523
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+IA G +H+ +++ G + +G GQ
Sbjct: 1524 KIAAGHQHAMAISEYGEVYLWGANDAGQ 1551
>gi|18073943|emb|CAC86116.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
Length = 815
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 26/119 (21%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P LV+ P K+ +VA GG HT++L++ V+ +G G GQLGLG+ + P +I
Sbjct: 234 TPQLVSEIPE-KVIQVACGGEHTVVLTE-NAVYTFGLGQFGQLGLGTFLFETSEPKVIEN 291
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +D+ + SY I+CG H+A++TD G + TFG G +G+
Sbjct: 292 I------RDQTI---------------SY---ISCGENHTALITDIGLMYTFGDGRHGK 326
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 54/139 (38%), Gaps = 31/139 (22%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
C+ L P K+ A G HTL+ ++ G V+ G EGQLGLG I +
Sbjct: 80 CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
H I L +A L G + NS G+ G V I+
Sbjct: 139 EHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGNPVSWIS 196
Query: 296 CGGRHSAVVTDAGALLTFG 314
CG HSA VT G L FG
Sbjct: 197 CGYYHSAFVTTDGELYVFG 215
>gi|158257096|dbj|BAF84521.1| unnamed protein product [Homo sapiens]
Length = 815
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 26/119 (21%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P LV+ P K+ +VA GG HT++L++ V+ +G G GQLGLG+ + P +I
Sbjct: 234 TPQLVSEIPE-KVIQVACGGEHTVVLTE-NAVYTFGLGQFGQLGLGTFLFETSEPKVIEN 291
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +D+ + SY I+CG H+A++TD G + TFG G +G+
Sbjct: 292 I------RDQTI---------------SY---ISCGENHTALITDIGLMYTFGDGRHGK 326
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 54/139 (38%), Gaps = 31/139 (22%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
C+ L P K+ A G HTL+ ++ G V+ G EGQLGLG I +
Sbjct: 80 CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
H I L +A L G + NS G+ G V I+
Sbjct: 139 EHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWIS 196
Query: 296 CGGRHSAVVTDAGALLTFG 314
CG HSA VT G L FG
Sbjct: 197 CGYYHSAFVTTDGELYVFG 215
>gi|4506581|ref|NP_000319.1| X-linked retinitis pigmentosa GTPase regulator isoform A [Homo
sapiens]
gi|1314871|gb|AAC50481.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
gi|2204218|emb|CAA66258.1| XLRP3 [Homo sapiens]
gi|119579845|gb|EAW59441.1| retinitis pigmentosa GTPase regulator, isoform CRA_a [Homo sapiens]
Length = 815
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 26/119 (21%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P LV+ P K+ +VA GG HT++L++ V+ +G G GQLGLG+ + P +I
Sbjct: 234 TPQLVSEIPE-KVIQVACGGEHTVVLTE-NAVYTFGLGQFGQLGLGTFLFETSEPKVIEN 291
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +D+ + SY I+CG H+A++TD G + TFG G +G+
Sbjct: 292 I------RDQTI---------------SY---ISCGENHTALITDIGLMYTFGDGRHGK 326
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 54/139 (38%), Gaps = 31/139 (22%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
C+ L P K+ A G HTL+ ++ G V+ G EGQLGLG I +
Sbjct: 80 CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
H I L +A L G + NS G+ G V I+
Sbjct: 139 EHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWIS 196
Query: 296 CGGRHSAVVTDAGALLTFG 314
CG HSA VT G L FG
Sbjct: 197 CGYYHSAFVTTDGELYVFG 215
>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
Length = 4840
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 25/112 (22%)
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
N VK V +GGRH + L+ G+V+ WG G +G+LG SR+
Sbjct: 3048 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNC---------------- 3091
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
D+P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3092 -DKPRLIE------ALKTKR--IRDIACGSSHSAAITSSGELYTWGLGEYGR 3134
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL P LV I K+AA G H L LS G+V+ WG G G+LG G + + P
Sbjct: 482 TLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPL-EEPK 540
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I L SGK +V IACG +SA +T G L T+G G
Sbjct: 541 MISAL--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 580
Query: 318 YGQ 320
YG+
Sbjct: 581 YGR 583
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4032 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4082
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA +T AG L T+G G Y
Sbjct: 4083 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRY 4125
Query: 319 GQ 320
G+
Sbjct: 4126 GR 4127
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ ++ K G A+A + GK+ +WG DD G+ S + + P
Sbjct: 3038 PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3096
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3097 IEALKTKRIRDIACGSSHSAAITSSGELYTWGLGE----------YGRLG--HGDNT--- 3141
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3142 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3194
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG G+ + V P
Sbjct: 3195 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH-VRKPQ 3253
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD G + +G
Sbjct: 3254 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDTGQVYAWGDND 3289
Query: 318 YGQR 321
+GQ+
Sbjct: 3290 HGQQ 3293
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
D+ CG F++A ++ G++ TWG D++ + T +H P+ V+ AA
Sbjct: 659 DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE-EHVRYPKLLEGLKGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 33/71 (46%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TW D + S H P V+ A G HCV
Sbjct: 4210 GSQFSVALTKSGAVYTWQVFRDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4269
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4270 CTEDGEVYTWG 4280
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 108/280 (38%), Gaps = 61/280 (21%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
GG A + GK+ G A T+G+ G + P+P + + VVK
Sbjct: 3002 AGGSKSLFAVTVEGKVYACGEA--------TNGRLGLGISSGTVPIPRQITALSNYVVKK 3053
Query: 110 AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
A G H +++T G+V++WG D G G F + + K + +
Sbjct: 3054 VAVHSGGRHAMALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3103
Query: 167 PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
A TSS E GD L P +V + G ++ +VA G
Sbjct: 3104 RIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3163
Query: 221 GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
R TL L+D G V+ WG G G+LG G + G + P + +
Sbjct: 3164 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 3205
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+N G V +I CG + S +T +G + T+G G Y
Sbjct: 3206 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDY 3238
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 594 IPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 648
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + +VK G +++T+ G+VYTWG
Sbjct: 649 PKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWG 683
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 75/212 (35%), Gaps = 65/212 (30%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G P+ ++ VVK
Sbjct: 4155 CGSGDAQTLCLTDDDTVWSWGDGD-----YGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4209
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G V++T++G VYTW +V RD+ G D
Sbjct: 4210 GSQFSVALTKSGAVYTW---------QVFRDYHRLGHGSDDH------------------ 4242
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
V+R + + G K+ +A G H + ++ G
Sbjct: 4243 -----VRRPRQVQGLQ-----------------------GKKVIAIATGSLHCVCCTEDG 4274
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
+V+ WG EGQLG G+ + P L+ L+
Sbjct: 4275 EVYTWGDNDEGQLGDGT-TNAIQRPRLVAALQ 4305
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 92/244 (37%), Gaps = 54/244 (22%)
Query: 46 LCGGDSWKDVCGGGCG--FALATSESGKLITWG----------SADDEGQSYLTSGKHGE 93
L G + K V CG ++ A + G+L TWG S++D+ L +G G
Sbjct: 545 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKG- 603
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
+ V +G A ++VTE G+V++WG D+G G D
Sbjct: 604 --------LKVIDVSCGSGDAQTLAVTENGQVWSWG----------DGDYGKLGRGGSDG 645
Query: 154 TGKQSALPTEQAPPSDKRAGEEVVKRRKTSS--------------AREESENPASGDEFF 199
+ +K ++VK R S + +++ G E
Sbjct: 646 CKTPKLI--------EKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEH 697
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P L+ G K+ VAAG H L L++ +V WG + Q R+ P P +
Sbjct: 698 VRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTK-PEPAAL 756
Query: 260 PCLE 263
P L+
Sbjct: 757 PGLD 760
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 28/122 (22%)
Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
P LVT G+K+ V+ +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 595 PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 653
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
L+ + ++ CG + S +T G + T+G G Q
Sbjct: 654 KLQDLD------------------------IVKVRCGSQFSIALTKDGQVYTWGKG-DNQ 688
Query: 321 RM 322
R+
Sbjct: 689 RL 690
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3244 GTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT 3297
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4057 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4108
Query: 117 VSVTEAGEVYTWG 129
+T AG+++TWG
Sbjct: 4109 ACITAAGDLFTWG 4121
>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
Length = 4839
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 25/112 (22%)
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
N VK V +GGRH + L+ G+V+ WG G +G+LG SR+
Sbjct: 3048 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNC---------------- 3091
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
D+P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3092 -DKPRLIE------ALKTKR--IRDIACGSSHSAAITSSGELYTWGLGEYGR 3134
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL P LV I K+AA G H L LS G+V+ WG G G+LG G + + P
Sbjct: 482 TLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPL-EEPK 540
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I L SGK +V IACG +SA +T G L T+G G
Sbjct: 541 MISAL--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 580
Query: 318 YGQ 320
YG+
Sbjct: 581 YGR 583
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4032 TPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDGKLGHGNR---------S 4082
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V +IA GG HSA +T AG L T+G G Y
Sbjct: 4083 PC--------DRPRVI---------ESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRY 4125
Query: 319 GQ 320
G+
Sbjct: 4126 GR 4127
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ ++ K G A+A + GK+ +WG DD G+ S + + P
Sbjct: 3038 PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3096
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3097 IEALKTKRIRDIACGSSHSAAITSSGELYTWGLGE----------YGRLG--HGDNT--- 3141
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3142 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3194
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG G+ + V P
Sbjct: 3195 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH-VRKPQ 3253
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD G + +G
Sbjct: 3254 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDTGQVYAWGDND 3289
Query: 318 YGQR 321
+GQ+
Sbjct: 3290 HGQQ 3293
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
D+ CG F++A ++ G++ TWG D++ + T +H P+ V+ AA
Sbjct: 659 DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE-EHVRYPKLLEGLKGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4210 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4268
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4269 CTEDGEVYTWG 4279
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 108/280 (38%), Gaps = 61/280 (21%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
GG A + GK+ G A T+G+ G + P+P + + VVK
Sbjct: 3002 AGGSKSLFAVTVEGKVYACGEA--------TNGRLGLGISSGTVPIPRQITALSNYVVKK 3053
Query: 110 AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
A G H +++T G+V++WG D G G F + + K + +
Sbjct: 3054 VAVHSGGRHAMALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3103
Query: 167 PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
A TSS E GD L P +V + G ++ +VA G
Sbjct: 3104 RIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3163
Query: 221 GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
R TL L+D G V+ WG G G+LG G + G + P + +
Sbjct: 3164 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 3205
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+N G V +I CG + S +T +G + T+G G Y
Sbjct: 3206 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDY 3238
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 594 IPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 648
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + +VK G +++T+ G+VYTWG
Sbjct: 649 PKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWG 683
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 92/244 (37%), Gaps = 54/244 (22%)
Query: 46 LCGGDSWKDVCGGGCG--FALATSESGKLITWG----------SADDEGQSYLTSGKHGE 93
L G + K V CG ++ A + G+L TWG S++D+ L +G G
Sbjct: 545 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKG- 603
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
+ V +G A ++VTE G+V++WG D+G G D
Sbjct: 604 --------LKVIDVSCGSGDAQTLAVTENGQVWSWG----------DGDYGKLGRGGSDG 645
Query: 154 TGKQSALPTEQAPPSDKRAGEEVVKRRKTSS--------------AREESENPASGDEFF 199
+ +K ++VK R S + +++ G E
Sbjct: 646 CKTPKLI--------EKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEH 697
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P L+ G K+ VAAG H L L++ +V WG + Q RI P P +
Sbjct: 698 VRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITK-PEPAAL 756
Query: 260 PCLE 263
P L+
Sbjct: 757 PGLD 760
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 28/122 (22%)
Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
P LVT G+K+ V+ +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 595 PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 653
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
L+ + ++ CG + S +T G + T+G G Q
Sbjct: 654 KLQDLD------------------------IVKVRCGSQFSIALTKDGQVYTWGKG-DNQ 688
Query: 321 RM 322
R+
Sbjct: 689 RL 690
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3244 GTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT 3297
>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 341
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 113/277 (40%), Gaps = 59/277 (21%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHC 116
G G + + G++ TWG DD L G +G P + A V++ G H
Sbjct: 41 GSGHTVVLTTDGEVFTWGRGDD---GRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHT 97
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGE 174
+VT G++YTWG G + K G ++ A P +
Sbjct: 98 AAVTGNGDLYTWG----------------GGMYGKLGHGDEAGHATPKRVEALVGATVAQ 141
Query: 175 EVVKRRKTSSARE--------ESENPASGD---EFFTLSPCLVTLNPGVKITKVAAGGRH 223
R T+ + EN +G E P L+ ++ +++A G H
Sbjct: 142 IACGSRHTAIVTASGALYTWGDKENGVAGHGETEGHQYLPRLLESMAAKRVAQISACGFH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
T I++D G+++ WG G G+LG S + +P ++ + GK +P
Sbjct: 202 TAIVTDAGELFTWGEGKFGRLGHMSE-RNCHSPTIVDYM----VGK-KP----------- 244
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
++++CGG H+AVV++ G L TFG G +GQ
Sbjct: 245 --------RQVSCGGFHTAVVSEDGRLYTFGGGEHGQ 273
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 111/272 (40%), Gaps = 61/272 (22%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGE-----TPEPFPLPTEASVVKAAAGWAHCVSV 119
A + +G L TWG G Y G HG+ TP+ A+V + A G H V
Sbjct: 99 AVTGNGDLYTWG-----GGMYGKLG-HGDEAGHATPKRVEALVGATVAQIACGSRHTAIV 152
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
T +G +YTWG +E G AG ++ G Q LP + KR +
Sbjct: 153 TASGALYTWGDKEN----------GVAG--HGETEGHQY-LPRLLESMAAKRVAQISACG 199
Query: 180 RKTSSAREESENPASGDEFF----------TLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
T+ + E G+ F SP +V G K +V+ GG HT ++S+
Sbjct: 200 FHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVSE 259
Query: 230 MGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
G+++ +G G GQLG R+ KM PT + L+
Sbjct: 260 DGRLYTFGGGEHGQLGHNDRVNKMTPT--FVEALD------------------------G 293
Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+V +I CG HS +T G + T+G G +G+
Sbjct: 294 MFVSQITCGWSHSVALTVKGLVYTWGNGDHGK 325
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 25/135 (18%)
Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
R E GD P V GV + ++A G HT++L+ G+V+ WG G +G+LG
Sbjct: 7 RGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRGDDGRLG 66
Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
G +P + + +G+ V ++ CG H+A VT
Sbjct: 67 HGDN-----GWKYVPRMTQSLAGQ--------------------IVLQVTCGSYHTAAVT 101
Query: 306 DAGALLTFGWGLYGQ 320
G L T+G G+YG+
Sbjct: 102 GNGDLYTWGGGMYGK 116
>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
Length = 4933
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 56/109 (51%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R+ DR
Sbjct: 4157 VKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRLSY-----------------DR 4199
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + S V +IACG HSA +T +G +LT+G G YG+
Sbjct: 4200 PKLLEHLNGMS--------VADIACGSAHSAAITASGHVLTWGKGRYGR 4240
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 27/110 (24%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R + D+
Sbjct: 2999 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL-----------------DK 3041
Query: 272 PLLVRQGSVNSSGKAGRS-YVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P LV +A R+ +++IACG HSA ++ G L T+G G YG+
Sbjct: 3042 PRLV---------EALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGR 3082
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
G F+LA + +G++ TWG D Y G +H P+P V+ A G
Sbjct: 3165 GAQFSLALTRAGEVWTWGKGD-----YYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGAL 3219
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+AG+VY WG
Sbjct: 3220 HCLAVTDAGQVYAWG 3234
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P+ ++ A G HCV+
Sbjct: 4323 GSQFSVALTKSGAVYTWGKGDFHRLGH-GSVDHVRRPKKVAALQGKKIISIATGSLHCVA 4381
Query: 119 VTEAGEVYTWG 129
++AGEVYTWG
Sbjct: 4382 CSDAGEVYTWG 4392
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 79/222 (35%), Gaps = 66/222 (29%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
L G + CG G L ++ + +WG D Y G+ G P E+
Sbjct: 4258 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKLPYKIESL 4312
Query: 105 ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
V+K G V++T++G VYTWG G F + G
Sbjct: 4313 AGLGVIKVECGSQFSVALTKSGAVYTWG----------------KGDFHRLGHG------ 4350
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
+ V+R K +A + G KI +A G
Sbjct: 4351 -----------SVDHVRRPKKVAALQ-----------------------GKKIISIATGS 4376
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
H + SD G+V+ WG EGQLG G+ + + P L+ L+
Sbjct: 4377 LHCVACSDAGEVYTWGDNDEGQLGDGT-VTAIQRPRLVAALQ 4417
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 114/309 (36%), Gaps = 62/309 (20%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAA---G 112
GG S+ GK+ G + L G P P LP VVK A G
Sbjct: 2951 AGGSKSLFVVSQDGKVFACGEGTN---GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSG 3007
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H +++T G+V++WG E G G + + K + +A K+
Sbjct: 3008 GKHALALTLDGKVFSWGEGE----------DGKLGHGNRTTLDKPRLVEALRA----KKI 3053
Query: 173 GEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
+ +++ + E GD L P LVT G ++ +VA G R
Sbjct: 3054 RDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALCGSRVIQVACGSR 3113
Query: 223 --HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDRPL-L 274
TL L++ G V+ WG G G+LG G + TPH I L G L L
Sbjct: 3114 DAQTLALTEDGAVFSWGDGDFGKLGRGGS-EGSATPHEIERLSGIGVVQIECGAQFSLAL 3172
Query: 275 VRQGSV--------NSSGKAGRSYVKE--------------IACGGRHSAVVTDAGALLT 312
R G V G G +V++ +A G H VTDAG +
Sbjct: 3173 TRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYA 3232
Query: 313 FGWGLYGQR 321
+G +GQ+
Sbjct: 3233 WGDNDHGQQ 3241
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHC 116
G F+LA + G+L +WG A G + G P +V A G HC
Sbjct: 803 AGSQFSLALTGEGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVDVAVGVTHC 862
Query: 117 VSVTEAGEVYTWG 129
++++ AGE++ WG
Sbjct: 863 LALSSAGEIFGWG 875
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 15/91 (16%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE-------TPEPF 98
LCG + CG LA +E G + +WG D GK G TP
Sbjct: 3100 LCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGD--------FGKLGRGGSEGSATPHEI 3151
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ VV+ G +++T AGEV+TWG
Sbjct: 3152 ERLSGIGVVQIECGAQFSLALTRAGEVWTWG 3182
>gi|8131934|gb|AAF73143.1|AF148800_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 918
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 27/113 (23%)
Query: 210 PGV--KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
PG+ K+ +VA GG HT++L++ V+ +G G GQLGLG+ + P I EH
Sbjct: 239 PGIPGKVVQVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAI---EHIKD 294
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
K + IACG H+A++TD G + TFG G +G+
Sbjct: 295 QK---------------------ISFIACGENHTALITDMGLMYTFGDGRHGK 326
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 57/138 (41%), Gaps = 29/138 (21%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL- 262
C+ L P K+ A G HTL+ ++ G+V+ G EGQLGLG + T HLI
Sbjct: 80 CVKALKPE-KVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGD-TEERSTFHLISFFT 137
Query: 263 ------EHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IAC 296
+ +A L G + NS G+ G V I+C
Sbjct: 138 SQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWISC 197
Query: 297 GGRHSAVVTDAGALLTFG 314
G HSA VT G L TFG
Sbjct: 198 GYYHSAFVTTEGQLYTFG 215
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG---SRIKMVP 254
F T P + KI+ +A G HT +++DMG ++ +G G G+LGLG S + +P
Sbjct: 281 FETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIP 340
Query: 255 T 255
T
Sbjct: 341 T 341
>gi|397472457|ref|XP_003807760.1| PREDICTED: LOW QUALITY PROTEIN: RCC1 domain-containing protein 1
[Pan paniscus]
Length = 377
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 83/190 (43%), Gaps = 25/190 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G AL +G++ +WG GQ L G EP L +V A AAG H
Sbjct: 167 GAEHALLLDAAGQVFSWGGGR-HGQ--LGHGTLEAELEPRLLEALQGLVMAEVAAGGWHS 223
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V V+E G++Y WGW E A TR+ G + +++T E+
Sbjct: 224 VCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREAT----------------ELNED 267
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ ++T A + + P + F P L L G K + G RHT +++ G+++
Sbjct: 268 GSQVKRTGGAEDGAPAPFIAVQPF---PALPDLPMGSDAVKASCGSRHTAVVTRTGELYT 324
Query: 236 WGYGGEGQLG 245
WG+G GQLG
Sbjct: 325 WGWGKYGQLG 334
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR----------- 249
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L +R
Sbjct: 200 LEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAR 259
Query: 250 --IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA 307
++ + A G P + Q S + +CG RH+AVVT
Sbjct: 260 EATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALPDLPMGSDAVKASCGSRHTAVVTRT 319
Query: 308 GALLTFGWGLYGQ 320
G L T+GWG YGQ
Sbjct: 320 GELYTWGWGKYGQ 332
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 27/131 (20%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P L P ++ ++ G H L+L GQV+ WG G GQLG G+ ++ P L+
Sbjct: 149 APFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT-LEAELEPRLLEA 207
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQR 321
L QG V + E+A GG HS V++ G + +GW GQ
Sbjct: 208 L--------------QGLV----------MAEVAAGGWHSVCVSETGDIYIWGWNESGQL 243
Query: 322 M--AKCLAGDG 330
+ LA DG
Sbjct: 244 ALPTRNLAEDG 254
>gi|332243760|ref|XP_003271040.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Nomascus
leucogenys]
Length = 814
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 26/119 (21%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P LV+ P K+ +VA GG HT++L++ V+ +G G GQLGLG+ + P +I
Sbjct: 234 TPQLVSEIPE-KVIQVACGGEHTVVLTE-NAVYTFGLGQFGQLGLGTFLFETSDPKVIEN 291
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +D+ + SY I+CG H+A++TD G + TFG G +G+
Sbjct: 292 I------RDQTI---------------SY---ISCGESHTALITDIGLMYTFGDGRHGK 326
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 54/139 (38%), Gaps = 31/139 (22%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
C+ L P K+ A G HTL+ ++ G V+ G EGQLGLG I +
Sbjct: 80 CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
H I L +A L G + NS G+ G V I+
Sbjct: 139 EHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVTNVCVPQQVTIGKPVSWIS 196
Query: 296 CGGRHSAVVTDAGALLTFG 314
CG HSA VT G L FG
Sbjct: 197 CGYYHSAFVTTDGELYVFG 215
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 23/106 (21%)
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
F T P ++ I+ ++ G HT +++D+G ++ +G G G+LGLG T H
Sbjct: 281 FETSDPKVIENIRDQTISYISCGESHTALITDIGLMYTFGDGRHGKLGLGLE---NFTNH 337
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
IP L R VK +ACGG H V
Sbjct: 338 FIPTL--------------------CSNFSRFIVKLVACGGCHMVV 363
>gi|326680006|ref|XP_003201431.1| PREDICTED: RCC1 domain-containing protein 1 [Danio rerio]
Length = 410
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 58/127 (45%), Gaps = 28/127 (22%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE------H 264
GV I VAAG H+ +S G ++ WG+ GQLGL SR LE +
Sbjct: 238 GVPIKAVAAGNWHSAAVSSGGDLYMWGWNESGQLGLPSR-----------GLEEEKRRGN 286
Query: 265 AASGKDRPLLVRQGSVNSS-----------GKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
+ D+P+ + S A S + I+CG RH+A VT AG L T+
Sbjct: 287 GSGNDDQPMNTDEKSQTDVFISIQAFPALVDIANMSEISRISCGSRHTAAVTSAGDLYTW 346
Query: 314 GWGLYGQ 320
GWG YGQ
Sbjct: 347 GWGQYGQ 353
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 87/208 (41%), Gaps = 45/208 (21%)
Query: 59 GCGFALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPF-PLPTEASVVKAAAGWAH 115
G AL + G L +WGS G LTS + + E +P +A AAG H
Sbjct: 195 GSEHALLLTADGTLYSWGSGSHGQLGHGALTSLEDPQAVEALWGVPIKA----VAAGNWH 250
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
+V+ G++Y WGW E Q LP+ G E
Sbjct: 251 SAAVSSGGDLYMWGWNE----------------------SGQLGLPSR---------GLE 279
Query: 176 VVKRRKTSSAREE----SENPASGDEFFTLS--PCLVTLNPGVKITKVAAGGRHTLILSD 229
KRR S ++ ++ + D F ++ P LV + +I++++ G RHT ++
Sbjct: 280 EEKRRGNGSGNDDQPMNTDEKSQTDVFISIQAFPALVDIANMSEISRISCGSRHTAAVTS 339
Query: 230 MGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
G ++ WG+G GQLG G+ PTP
Sbjct: 340 AGDLYTWGWGQYGQLGHGTEHSTDEPTP 367
>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis domestica]
Length = 4706
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 25/112 (22%)
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
N VK V +GGRH + L+ G+V+ WG G +G+LG SR+
Sbjct: 3045 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNC---------------- 3088
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
D+P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3089 -DKPRLIE------ALKTKR--IRDIACGSSHSAAITSSGELYTWGLGEYGR 3131
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 482 TLGPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPL-EEPK 540
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I L SGK +V IACG +SA +T G L T+G G
Sbjct: 541 MISAL--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 580
Query: 318 YGQ 320
YG+
Sbjct: 581 YGR 583
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ ++ K G A+A + GK+ +WG DD G+ S + + P
Sbjct: 3035 PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3093
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3094 IEALKTKRIRDIACGSSHSAAITSSGELYTWGLGE----------YGRLG--HGDNT--- 3138
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3139 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG G+ + V P
Sbjct: 3192 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH-VRKPQ 3250
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD G + +G
Sbjct: 3251 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDTGQVYAWGDND 3286
Query: 318 YGQR 321
+GQ+
Sbjct: 3287 HGQQ 3290
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ VV AA
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVVDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4077 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4135
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4136 CTEDGEVYTWG 4146
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 108/280 (38%), Gaps = 61/280 (21%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
GG A + GK+ G A T+G+ G + P+P + + VVK
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGEA--------TNGRLGLGISSGTVPIPRQITALSNYVVKK 3050
Query: 110 AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
A G H +++T G+V++WG D G G F + + K + +
Sbjct: 3051 VAVHSGGRHAMALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3100
Query: 167 PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
A TSS E GD L P +V + G ++ +VA G
Sbjct: 3101 RIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3160
Query: 221 GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
R TL L+D G V+ WG G G+LG G + G + P + +
Sbjct: 3161 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 3202
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+N G V +I CG + S +T +G + T+G G Y
Sbjct: 3203 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDY 3235
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 93/236 (39%), Gaps = 38/236 (16%)
Query: 46 LCGGDSWKDVCGGGCG--FALATSESGKLITWG----------SADDEGQSYLTSGKHGE 93
L G + K V CG ++ A + G+L TWG S++D+ L +G G
Sbjct: 545 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKG- 603
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
+ V +G A ++VTE G+V++WG D+G G D
Sbjct: 604 --------LKVIDVSCGSGDAQTLAVTENGQVWSWG----------DGDYGKLGRGGSDG 645
Query: 154 TGKQSALPTEQAPPSDK-RAGEE----VVKRRKTSS-AREESENPASGDEFFTLSPCLVT 207
+ Q K R G + + K + S + +++ G E P L+
Sbjct: 646 CKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G K+ VAAG H L L++ +V WG + Q RI P P +P L+
Sbjct: 706 GLQGKKVVDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITK-PEPTALPGLD 760
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3241 GTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT 3294
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
P LVT G+K+ V+ +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 595 PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 653
Query: 261 CLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 654 KLQDLDVVKVRCGSQFSVALTKDGQVYSWGK 684
>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus (Silurana) tropicalis]
gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 1049
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 47/137 (34%), Positives = 60/137 (43%), Gaps = 28/137 (20%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP-HL-----IPCLEHA 265
V+I +VA G H+L LS ++ WG GQLGLG IK P H+ IP A
Sbjct: 137 VQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAG----------------RSY-VKEIACGGRHSAV 303
A G L G++ N G+ G RS + I CG H+A
Sbjct: 197 AGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAA 256
Query: 304 VTDAGALLTFGWGLYGQ 320
+T G + TFG G YGQ
Sbjct: 257 LTKEGGVFTFGAGGYGQ 273
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 57/132 (43%), Gaps = 31/132 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASG 268
I V+ G HTL L+D GQV+ WG+ GQ+GL + + + P I L A G
Sbjct: 86 IVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACG 145
Query: 269 KDRPLLVRQGS------VNSSGKAGRS----------YVK--------EIACGGRHSAVV 304
L + + S N G+ G ++K IA GG HS +
Sbjct: 146 HHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFAL 205
Query: 305 TDAGALLTFGWG 316
T +GA+ FGWG
Sbjct: 206 TISGAI--FGWG 215
Score = 41.6 bits (96), Expect = 0.50, Method: Composition-based stats.
Identities = 49/195 (25%), Positives = 69/195 (35%), Gaps = 60/195 (30%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GGG FAL S G + WG + GQ LT P ++ G H
Sbjct: 198 GGGHSFALTIS--GAIFGWGR-NKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHT 254
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
++T+ G V+T+G G G +ST +
Sbjct: 255 AALTKEGGVFTFG-------------AGGYGQLGHNSTNHE------------------- 282
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL-ILSDMGQVWG 235
V RK F L G +T++A G +HTL + G+++
Sbjct: 283 VNPRKV----------------FELM--------GSIVTQIACGRQHTLAFVPSSGRIYS 318
Query: 236 WGYGGEGQLGLGSRI 250
+G GG GQLG GS I
Sbjct: 319 FGLGGNGQLGTGSTI 333
>gi|126631716|gb|AAI33847.1| Wu:fc44f06 protein [Danio rerio]
Length = 389
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 58/127 (45%), Gaps = 28/127 (22%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE------H 264
GV I VAAG H+ +S G ++ WG+ GQLGL SR LE +
Sbjct: 217 GVPIKAVAAGNWHSAAVSSGGDLYMWGWNESGQLGLPSR-----------GLEEEKRRGN 265
Query: 265 AASGKDRPLLVRQGSVNSS-----------GKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
+ D+P+ + S A S + I+CG RH+A VT AG L T+
Sbjct: 266 GSGNDDQPINTDEKSQTDVFISIQAFPALVDIANMSEISRISCGSRHTAAVTSAGDLYTW 325
Query: 314 GWGLYGQ 320
GWG YGQ
Sbjct: 326 GWGQYGQ 332
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 84/207 (40%), Gaps = 43/207 (20%)
Query: 59 GCGFALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G AL + G L +WGS G LTS E P+ + AAG H
Sbjct: 174 GSEHALLLTADGTLYSWGSGSHGQLGHGALTSL---EDPQAVEALWGVPIKAVAAGNWHS 230
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+V+ G++Y WGW E Q LP+ G E
Sbjct: 231 AAVSSGGDLYMWGWNE----------------------SGQLGLPSR---------GLEE 259
Query: 177 VKRRKTSSAREE----SENPASGDEFFTLS--PCLVTLNPGVKITKVAAGGRHTLILSDM 230
KRR S ++ ++ + D F ++ P LV + +I++++ G RHT ++
Sbjct: 260 EKRRGNGSGNDDQPINTDEKSQTDVFISIQAFPALVDIANMSEISRISCGSRHTAAVTSA 319
Query: 231 GQVWGWGYGGEGQLGLGSRIKM-VPTP 256
G ++ WG+G GQLG G+ PTP
Sbjct: 320 GDLYTWGWGQYGQLGHGTEHSTDEPTP 346
>gi|340721975|ref|XP_003399388.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like isoform 1
[Bombus terrestris]
Length = 534
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 87/233 (37%), Gaps = 57/233 (24%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE-----TPEPFPL 100
LCG + K G LA +E GK+ +WG HGE T P+
Sbjct: 73 LCGKN-IKTFAYGKGPHVLALTEEGKVYSWGH-----------NSHGELGNCSTNHMIPM 120
Query: 101 PT-----EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
P + +V A G H +++T G+VY WG C G G
Sbjct: 121 PVTKNLNDEFIVDIACGSHHSLALTNEGKVYAWGENTC----------GQVG-------- 162
Query: 156 KQSALPTEQAP--PSDKRAGEEVVKRRKTSSAREESENPAS--------------GDEFF 199
+S E P + AG+ V+ S+ + G+
Sbjct: 163 -KSVNINENTPMKVNSTLAGKTVICISCGQSSSMTVTDTGKVYGWGCNDVGQLGIGNYVN 221
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+ PC VT+ V I K+ G H L LS+ G ++ WG GQLGLG ++ M
Sbjct: 222 QVDPCEVTMLVDVVIKKIVCGYAHVLALSNKGALYVWGGNNYGQLGLGMKMNM 274
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 50/124 (40%), Gaps = 28/124 (22%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T P V G I A G G H L L++ G+V+ WG+ G+LG S M
Sbjct: 58 TGDACNTFYPKKVEALCGKNIKTFAYGKGPHVLALTEEGKVYSWGHNSHGELGNCSTNHM 117
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
+P P + ++ +IACG HS +T+ G +
Sbjct: 118 IPMP-------------------------VTKNLNDEFIVDIACGSHHSLALTNEGKV-- 150
Query: 313 FGWG 316
+ WG
Sbjct: 151 YAWG 154
>gi|166240446|ref|XP_001733000.1| ankyrin repeat-containing protein [Dictyostelium discoideum AX4]
gi|165988602|gb|EDR41072.1| ankyrin repeat-containing protein [Dictyostelium discoideum AX4]
Length = 883
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 113/288 (39%), Gaps = 52/288 (18%)
Query: 59 GCGFALATSESGKLITWGSADD--EGQSYLTSGKHGETPEPFPLPTEAS------VVKAA 110
G +LA + G + +WG+ + G G+ P + T AS VV+ +
Sbjct: 251 GSHHSLALDDLGLVYSWGNGSNGRLGLELHILGEKKIVSTPTLISTIASNTLDPVVVQIS 310
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
AG+ + +T G VY++G S K+ D G+ +Q +S P +Q S+
Sbjct: 311 AGFDNSFLITSNGSVYSFG---SAISEKLGYD-GTVLGYQALPRKIESIPPMKQVSASNL 366
Query: 171 RA------GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLN----PGVKITKVAAG 220
G T+ N D P +V+ G I K+A G
Sbjct: 367 HTVLLDTCGNVYAFGSPTNGRLGRPSNGPRND----YKPTMVSFGSGGGDGTVIKKIATG 422
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM---VPTPHLIPCLEHAASGKDRPLLVRQ 277
T++LSD G+++GWG GQLG+ + +P LI CL
Sbjct: 423 TNFTIVLSDSGELFGWGGNSNGQLGVEPICNVSDSFDSPTLIKCL--------------- 467
Query: 278 GSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQRMAKC 325
S+ G+ + + A G +H +++D G + FG R A+C
Sbjct: 468 ----SNLNCGKITIHDFAVGDQHVVILSDVGEVFCFG----EDRKAQC 507
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 24/106 (22%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI----KMVPTPHLIPCLEHAASG 268
+I ++ G H+L L D+G V+ WG G G+LGL I K+V TP LI + AS
Sbjct: 244 RIKSISCGSHHSLALDDLGLVYSWGNGSNGRLGLELHILGEKKIVSTPTLISTI---ASN 300
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
P++V +I+ G +S ++T G++ +FG
Sbjct: 301 TLDPVVV-----------------QISAGFDNSFLITSNGSVYSFG 329
>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Canis lupus familiaris]
Length = 529
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 95/235 (40%), Gaps = 36/235 (15%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL K C G G LAT+E G++ TWG S L +G P
Sbjct: 89 PRRLDALSGKKIACLSYGSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCH 144
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V + A G H + +T GEV+ WG + ++G ST
Sbjct: 145 ISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTAN 191
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA----SGDEFFTL-------SPCL 205
Q +P + + + S A + +G+ L +PC
Sbjct: 192 Q-PIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCR 250
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
+ G++I +VA G HTL+L+D GQV+ WG GQLG G++ P P ++
Sbjct: 251 IAALQGIRIQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVVV 305
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K +T+VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 140 LVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 258
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
++ +ACG H+ V+TD G + +G YGQ
Sbjct: 259 IQRVACGYAHTLVLTDEGQVYAWGANSYGQ 288
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A +G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L S + TP + + A G+AH + +T+ G+VY WG
Sbjct: 232 NGNGQLGLGSSGNQPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWG 282
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDVQSTIEPRRLDALSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VTEVACGSYHSLVLTSDGEVFA 175
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 176 WGYNNSGQ 183
>gi|241651044|ref|XP_002411264.1| RCC1 and BTB domain-containing protein, putative [Ixodes
scapularis]
gi|215503894|gb|EEC13388.1| RCC1 and BTB domain-containing protein, putative [Ixodes
scapularis]
Length = 533
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 82/211 (38%), Gaps = 34/211 (16%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
LA ++SG L++WG + Q G P + V A G H +++T A
Sbjct: 86 VLAVTQSGDLLSWGH-NGYCQLGNNCNTQGLVPSSIVVTMHHQVAHVACGSHHSLALTCA 144
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD---KRAGEEVVKR 179
GEVY WG C G GS G + PT + S +R +
Sbjct: 145 GEVYAWGQNNC----------GQVGS------GSTTNQPTPRKVTSGIGGRRCIGIACGQ 188
Query: 180 RKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
+ + E E G+ SPC VT GV V G HT+ LSD
Sbjct: 189 TSSMAVMENGEVFGWGYNGNGQLGLGNNVNQTSPCRVTNLQGVV---VVCGYAHTMALSD 245
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
G ++ WG GQLG G++ V +P +P
Sbjct: 246 EGVLYTWGANSYGQLGTGNKANQV-SPFRMP 275
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 27/146 (18%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P + + ++ VA G H+L L+ G+V+ WG GQ+G GS PTP +
Sbjct: 115 LVPSSIVVTMHHQVAHVACGSHHSLALTCAGEVYAWGQNNCGQVGSGSTTNQ-PTPRKVT 173
Query: 261 -------CLEHAASGKDRPLLVRQGSV-----NSSGKAGR-SYVKE-------------I 294
C+ A ++ G V N +G+ G + V + +
Sbjct: 174 SGIGGRRCIGIACGQTSSMAVMENGEVFGWGYNGNGQLGLGNNVNQTSPCRVTNLQGVVV 233
Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQ 320
CG H+ ++D G L T+G YGQ
Sbjct: 234 VCGYAHTMALSDEGVLYTWGANSYGQ 259
Score = 37.7 bits (86), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 58/145 (40%), Gaps = 17/145 (11%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WG G S P P ++ G + G CG ++A E+G++ WG
Sbjct: 147 VYAWGQNNCGQVGSGSTTNQPTPRKVTSGIGGRRCIGIACGQTSSMAVMENGEVFGWGY- 205
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
G L G + P + VV G+AH +++++ G +YTWG
Sbjct: 206 --NGNGQLGLGNNVNQTSPCRVTNLQGVV-VVCGYAHTMALSDEGVLYTWG--------- 253
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTE 163
+G G+ K + +PTE
Sbjct: 254 -ANSYGQLGTGNKANQVSPFRMPTE 277
>gi|444722116|gb|ELW62819.1| RCC1 domain-containing protein 1 [Tupaia chinensis]
Length = 309
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 62/133 (46%), Gaps = 13/133 (9%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM----VPTP 256
L P L+ GV + +VAAGG H++ +S G ++ WG+ GQL L +R M +
Sbjct: 132 LEPRLLEALQGVPMAEVAAGGWHSVCVSATGDIYIWGWNESGQLALPARSLMEDWNMVAE 191
Query: 257 HLIPCLEHAAS---------GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA 307
E A++ G P + Q S + +CG RH+AVVT
Sbjct: 192 EATGLSEEASTLKTVAGDEAGAPTPFIAIQPFPALVDLPLGSEAVQASCGSRHTAVVTRT 251
Query: 308 GALLTFGWGLYGQ 320
G L T+GWG YGQ
Sbjct: 252 GELYTWGWGKYGQ 264
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 27/141 (19%)
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRE----CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ 164
AA GW H V V+ G++Y WGW E +P+ + D+ +++TG +E+
Sbjct: 149 AAGGW-HSVCVSATGDIYIWGWNESGQLALPARSLMEDWNMVA---EEATGL-----SEE 199
Query: 165 APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
A AG+E + P + F P LV L G + + + G RHT
Sbjct: 200 ASTLKTVAGDEA-----------GAPTPFIAIQPF---PALVDLPLGSEAVQASCGSRHT 245
Query: 225 LILSDMGQVWGWGYGGEGQLG 245
+++ G+++ WG+G GQLG
Sbjct: 246 AVVTRTGELYTWGWGKYGQLG 266
>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
Length = 4625
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/109 (35%), Positives = 51/109 (46%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V GGRH+L ++ G+V+ WG G +G+LG G + +P LI LE
Sbjct: 2956 VKKVTVHPGGRHSLCITREGKVFSWGEGIDGKLGHGDVTSRL-SPTLIEALE-------- 3006
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ EIACG HSA VT G L T+G G YG+
Sbjct: 3007 ----------------SKLIVEIACGSSHSAAVTADGELYTWGLGDYGR 3039
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 72/278 (25%), Positives = 107/278 (38%), Gaps = 65/278 (23%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGK--HGE-TPEPFPLPTEAS----VVKAAAGWAH 115
+L + GK+ +WG D GK HG+ T P EA +V+ A G +H
Sbjct: 2968 SLCITREGKVFSWGEGID--------GKLGHGDVTSRLSPTLIEALESKLIVEIACGSSH 3019
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
+VT GE+YTWG D+G G DS K +P + D + +
Sbjct: 3020 SAAVTADGELYTWG----------LGDYGRLG--HGDS--KTLHIPKQVKALQDYKVIDI 3065
Query: 176 VVKRRKTSSAREESENP--ASGD-EFFTLS---------PCLVTLNPGVKITKVAAGGRH 223
R + N + GD +F L P + G + ++A G +
Sbjct: 3066 ACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGGSEGCNIPQKIDALCGRDVCRIACGAQF 3125
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
+L LS G+VW WG G +LG G+ +P LI
Sbjct: 3126 SLALSTTGKVWTWGKGDYYRLGHGND-SHYRSPQLI-----------------------E 3161
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQR 321
G + + EIA G H VTD G + ++G +GQ+
Sbjct: 3162 GPLKKKRITEIAVGALHCLAVTDTGEVYSWGDNDHGQQ 3199
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 16/91 (17%)
Query: 46 LCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFP 99
LCG +DVC CG F+LA S +GK+ TWG D Y G H +P+
Sbjct: 3111 LCG----RDVCRIACGAQFSLALSTTGKVWTWGKGD-----YYRLGHGNDSHYRSPQLIE 3161
Query: 100 LPTEAS-VVKAAAGWAHCVSVTEAGEVYTWG 129
P + + + A G HC++VT+ GEVY+WG
Sbjct: 3162 GPLKKKRITEIAVGALHCLAVTDTGEVYSWG 3192
Score = 54.3 bits (129), Expect = 8e-05, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 27/122 (22%)
Query: 201 LSPCLVTLNPGVKITK--VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
++P ++ +KI K V +GGRH ++L+ +V+ WG G +G+LG G ++ TP
Sbjct: 3844 VTPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSS-ETPRK 3902
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
I LL +Q + I+CG HSA +T G L T+G G Y
Sbjct: 3903 I-----------EALLGKQ-------------IVHISCGSSHSAAITSKGELYTWGKGRY 3938
Query: 319 GQ 320
G+
Sbjct: 3939 GR 3940
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
VC CG F++A +++G L TWG D + T+ H P +V AAG
Sbjct: 4017 VCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGTN-DHVRRPRKVACLQGKQIVTVAAG 4075
Query: 113 WAHCVSVTEAGEVYTWG 129
HCV+ T+AGEV+TWG
Sbjct: 4076 SLHCVACTDAGEVFTWG 4092
Score = 50.8 bits (120), Expect = 9e-04, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 55/121 (45%), Gaps = 29/121 (23%)
Query: 202 SPCLVTLNPGVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ +KI K+AA G H L LS G V+ WG G G+LG G
Sbjct: 501 APVLLDSLIDIKIKKIAANVEGEHYLALSSDGCVYSWGSGDGGRLGHGDI---------- 550
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
+ P LV++ VN + +IACG +SA VT G L T+G G YG
Sbjct: 551 ---------RREPELVKE-LVNKK-------ITQIACGSTYSAAVTSNGELYTWGRGSYG 593
Query: 320 Q 320
+
Sbjct: 594 R 594
Score = 46.2 bits (108), Expect = 0.025, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
G +I VAAG H + +D G+V+ WG EGQLG G+ + +P P L+ LE+
Sbjct: 4066 GKQIVTVAAGSLHCVACTDAGEVFTWGDNDEGQLGNGT-LNPIPEPTLVTVLEN 4118
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 27/110 (24%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
KIT++A G ++ ++ G+++ WG G G+LG G+ L+P L SG
Sbjct: 564 KITQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNS-----EDRLLPTLVAGLSG---- 614
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGG--RHSAVVTDAGALLTFGWGLYGQ 320
S+V ++ACG H+ + G + ++G G YG+
Sbjct: 615 ----------------SHVVDVACGSGDAHTLAIDKDGIVWSWGDGDYGK 648
Score = 39.3 bits (90), Expect = 2.7, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 44/116 (37%), Gaps = 25/116 (21%)
Query: 201 LSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
L P LV G + VA +G HTL + G VW WG G G+LG G P +
Sbjct: 604 LLPTLVAGLSGSHVVDVACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRGGS-DCCKVPKV 662
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
+ L+H Y+ + CG + S + G + T+G
Sbjct: 663 VETLKHH----------------------NKYIVNVLCGSQFSVALGKDGTVWTWG 696
Score = 37.7 bits (86), Expect = 7.2, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + G + TWG +D + T H P+ +V A G +HC++
Sbjct: 679 GSQFSVALGKDGTVWTWGKSDGYRLGHGTL-DHVRYPKMVEGLINYHIVDIAVGPSHCLA 737
Query: 119 VTEAGEVYTWG 129
+T+ +++TWG
Sbjct: 738 LTDNCQIFTWG 748
>gi|358335048|dbj|GAA31002.2| E3 ubiquitin-protein ligase HERC4 [Clonorchis sinensis]
Length = 1185
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 103/255 (40%), Gaps = 42/255 (16%)
Query: 72 LITWGSADDEGQ-SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
L WG+ DD + + +P+P +P ++ A G+ H + + GEVY+ G
Sbjct: 9 LFGWGACDDNQLGPHEQDSQQISSPQPITVPNPWTIAHVACGYKHTLFLNADGEVYSCGG 68
Query: 131 RECVPSAKVTRDFGSAGSFQKDS-----TGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA 185
E FG G S T ++ T+ A + A R T
Sbjct: 69 NE----------FGQLGRSDSPSDFRRITALENHTITDIACGAYHNAAISYTGRLFTWGC 118
Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
+ GD+ S ++ ++ +V+ G H+L+L+D +++ +G GQLG
Sbjct: 119 NSNGQLGREGDDS---SVKMIRSLAEHRVVQVSLGLEHSLVLTDTSRLFVFGSNIWGQLG 175
Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
LG R D P+++ Q + +G R I+ GG HSAV+T
Sbjct: 176 LGFR-------------------SDLPIVIPQQLMCLAGLPIRC----ISAGGVHSAVLT 212
Query: 306 DAGALLTFGWGLYGQ 320
+G L +G YGQ
Sbjct: 213 ISGTLYVWGGNKYGQ 227
>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
Length = 786
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+K V++GG+H + LS G V+ WG G +G+LG G+++ DR
Sbjct: 14 IKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSY-----------------DR 56
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ G V +IACGG HSA +T AG L T+G G YG+
Sbjct: 57 PKLIED-------LLGVEIV-DIACGGHHSAAITSAGWLYTWGKGRYGR 97
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 77/218 (35%), Gaps = 70/218 (32%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G PL ++ VVK
Sbjct: 125 CGSGDAQTLCVTDDDNVWSWGDGD-----YGKLGRGGSDGCKVPLKIDSLAGLGVVKVEC 179
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G V++T +G VYTWG G + + G
Sbjct: 180 GSQFSVALTRSGAVYTWG----------------KGDYHRLGHGTD-------------- 209
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ V + RK ++ + G KI +A G H + SD G
Sbjct: 210 --DHVRRPRKVAALQ------------------------GKKIISIATGSLHCVACSDKG 243
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
+V+ WG EGQLG G+ + P L+ HA GK
Sbjct: 244 EVFTWGDNDEGQLGDGT-TSALHRPRLV----HALQGK 276
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 58/145 (40%), Gaps = 29/145 (20%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-----RIKMVPTPH 257
P L+ GV+I +A GG H+ ++ G ++ WG G G+LG G R K+V
Sbjct: 57 PKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQ 116
Query: 258 LIPCLEHAASGKDRPLLVRQGSVN-------SSGKAGRS-----------------YVKE 293
++ A D L N GK GR V +
Sbjct: 117 DYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVK 176
Query: 294 IACGGRHSAVVTDAGALLTFGWGLY 318
+ CG + S +T +GA+ T+G G Y
Sbjct: 177 VECGSQFSVALTRSGAVYTWGKGDY 201
>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
Length = 5062
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 56/109 (51%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R+ DR
Sbjct: 4286 VKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSY-----------------DR 4328
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + S V +IACG HSA +T +G +LT+G G YG+
Sbjct: 4329 PKLLEHLNGMS--------VADIACGSAHSAAITASGHVLTWGKGRYGR 4369
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 27/110 (24%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R S D+
Sbjct: 3132 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNR-----------------STLDK 3174
Query: 272 PLLVRQGSVNSSGKAGRS-YVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P LV +A R+ +++IACG HSA ++ G L T+G G YG+
Sbjct: 3175 PRLV---------EALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGR 3215
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
G F+LA + +G++ TWG D Y G +H P+P V+ A G
Sbjct: 3298 GAQFSLALTRAGEVWTWGKGD-----YYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGAL 3352
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+AG+VY WG
Sbjct: 3353 HCLAVTDAGQVYAWG 3367
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P+ ++ A G HCV+
Sbjct: 4452 GSQFSVALTKSGAVYTWGKGDFHRLGH-GSVDHVRRPKKVAALQGKKIISIATGSLHCVA 4510
Query: 119 VTEAGEVYTWG 129
++AGEVYTWG
Sbjct: 4511 CSDAGEVYTWG 4521
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 79/222 (35%), Gaps = 66/222 (29%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
L G + CG G L ++ + +WG D Y G+ G P E+
Sbjct: 4387 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKLPYKIESL 4441
Query: 105 ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
V+K G V++T++G VYTWG G F + G
Sbjct: 4442 AGLGVIKVECGSQFSVALTKSGAVYTWG----------------KGDFHRLGHG------ 4479
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
+ V+R K +A + G KI +A G
Sbjct: 4480 -----------SVDHVRRPKKVAALQ-----------------------GKKIISIATGS 4505
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
H + SD G+V+ WG EGQLG G+ + + P L+ L+
Sbjct: 4506 LHCVACSDAGEVYTWGDNDEGQLGDGT-VTAIQRPRLVAALQ 4546
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 114/319 (35%), Gaps = 82/319 (25%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAA---G 112
GG S+ GK+ G + L G P P LP VVK A G
Sbjct: 3084 AGGSKSLFVVSQDGKVYACGEGTN---GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSG 3140
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H +++T G+V++WG G K G +S L DK
Sbjct: 3141 GKHALALTLDGKVFSWG----------------EGEDGKLGHGNRSTL--------DKPR 3176
Query: 173 GEEVVKRRKTSSAREESENPAS--------------------GDEFFTLSPCLVTLNPGV 212
E ++ +K S + A+ GD L P LVT G
Sbjct: 3177 LVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALHGR 3236
Query: 213 KITKVAAGGR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HA 265
++ +VA G R TL L++ G V+ WG G G+LG G + TPH I L
Sbjct: 3237 RVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGS-EGSATPHEIERLSGIGVIQI 3295
Query: 266 ASGKDRPL-LVRQGSV--------NSSGKAGRSYVKE--------------IACGGRHSA 302
G L L R G V G G +V++ +A G H
Sbjct: 3296 ECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCL 3355
Query: 303 VVTDAGALLTFGWGLYGQR 321
VTDAG + +G +GQ+
Sbjct: 3356 AVTDAGQVYAWGDNDHGQQ 3374
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHC 116
G F+LA + G+L +WG A G + G P +V A G AHC
Sbjct: 779 AGSQFSLALTCEGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVHVAVGVAHC 838
Query: 117 VSVTEAGEVYTWG 129
++++ GE++ WG
Sbjct: 839 LALSSNGEIFGWG 851
>gi|118084892|ref|XP_417063.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Gallus gallus]
Length = 537
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 103/265 (38%), Gaps = 52/265 (19%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + V+++G GT +S I+ LCG G G L T
Sbjct: 38 NEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCT 97
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
E G++ WG G S L +G + P + T V++ A G H ++++ G
Sbjct: 98 -EDGEVYAWGH---NGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDG 153
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
++Y WG+ C G GS ST Q P+ +R + +
Sbjct: 154 DLYAWGYNNC----------GQVGS---GSTANQ---------PTPRRVSNCLQDKMVVG 191
Query: 184 SAREESENPAS-------------------GDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
A ++ + A G+ L+PC V GV I ++A G HT
Sbjct: 192 IACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHT 251
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSR 249
L L+D G ++ WG GQLG G++
Sbjct: 252 LALTDEGLLYAWGANTYGQLGTGNK 276
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 61/137 (44%), Gaps = 30/137 (21%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP-CLEH-----AA 266
K+ +VA G H++ LS G ++ WGY GQ+G GS PTP + CL+ A
Sbjct: 135 KVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQ-PTPRRVSNCLQDKMVVGIA 193
Query: 267 SGKDRPL-LVRQGSV-----NSSGKAGRSY-----------------VKEIACGGRHSAV 303
G+ + +V G V N +G+ G + +IACG H+
Sbjct: 194 CGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLA 253
Query: 304 VTDAGALLTFGWGLYGQ 320
+TD G L +G YGQ
Sbjct: 254 LTDEGLLYAWGANTYGQ 270
>gi|383847394|ref|XP_003699339.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Megachile
rotundata]
Length = 522
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 94/225 (41%), Gaps = 27/225 (12%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
+ + S +L P + G + K + G LA ++ GK+ +WG +D GQ L +G +
Sbjct: 56 ADDISNMLGPTKIEVLCGKNIKTLAVGR-DHLLALTKQGKVYSWG-CNDHGQ--LGNGCY 111
Query: 92 GETPEPF---PLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WRECVPSAKVTRDFGS 145
+ EP + +V A G + +++T+ GEVY+WG + E VP F S
Sbjct: 112 LSSTEPALVKIIKNNEHIVYIACGSDYSIALTKIGEVYSWGNIGYSENVPRQVQIDGFDS 171
Query: 146 AGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS-PC 204
+ + KR + + + S + S + + S PC
Sbjct: 172 KVT----------------SVACAKRFIIMITENGEVYSWGDNSSDQLRTRYYSNQSKPC 215
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
VT G+ I KV G H L LS G ++ WG GQLG R
Sbjct: 216 KVTALVGIVIKKVVCGSSHVLALSSTGDLYVWGKNDWGQLGTDGR 260
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 53/132 (40%), Gaps = 24/132 (18%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P + + G I +A G H L L+ G+V+ WG GQLG G +
Sbjct: 63 LGPTKIEVLCGKNIKTLAVGRDHLLALTKQGKVYSWGCNDHGQLGNGCYL---------- 112
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P LV+ N ++ IACG +S +T G + ++G Y +
Sbjct: 113 -------SSTEPALVKIIKNNE-------HIVYIACGSDYSIALTKIGEVYSWGNIGYSE 158
Query: 321 RMAKCLAGDGIN 332
+ + + DG +
Sbjct: 159 NVPRQVQIDGFD 170
>gi|357620246|gb|EHJ72511.1| hypothetical protein KGM_11261 [Danaus plexippus]
Length = 4305
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 61/120 (50%), Gaps = 27/120 (22%)
Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
P L+ V ITKVA +GG+H L LS G+V+ WG G +G+LG G+R+
Sbjct: 4027 PTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGKLGHGNRVSY-------- 4078
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
DRP L+ + +G V IACGG HSA +T G + T+G G YG+
Sbjct: 4079 ---------DRPKLI-------TALSGLEVVC-IACGGAHSACLTARGRIYTWGKGRYGR 4121
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 53/109 (48%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
V+ V +GG+H L L+ G+V+ WG G +G+LG G+RI + P LI L
Sbjct: 3144 VRRVAVHSGGKHALALTADGKVYSWGEGEDGKLGHGNRITL-EAPRLIESL--------- 3193
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
AG + IACG HSA VT G L T+G G YG+
Sbjct: 3194 --------------AGERVIS-IACGSAHSACVTARGHLYTWGLGEYGR 3227
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 122/323 (37%), Gaps = 76/323 (23%)
Query: 22 VYMWGY-----LPGT--SPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLI 73
V++WG L G S K P+ SP + L + V GG S GKL
Sbjct: 3059 VFVWGLNDKDQLGGVKGSKVKVPVFSPALSAL------RPVHIAGGSKTLFIVSHDGKLF 3112
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEAGEVYTWGWR 131
G + G+ L + TP P + V + A +G H +++T G+VY+WG
Sbjct: 3113 ACGEGTN-GRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTADGKVYSWGE- 3170
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK------RRKTSSA 185
G G G + + E + AGE V+ +A
Sbjct: 3171 ------------GEDGKL-----GHGNRITLEAPRLIESLAGERVISIACGSAHSACVTA 3213
Query: 186 RE--------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWG 235
R E GD+ L P +V ++ +VA G R TL L+ G+V+
Sbjct: 3214 RGHLYTWGLGEYGRLGHGDDNIQLVPKMVEALANYRVIQVACGSRDAQTLALTACGKVFS 3273
Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
WG G G+LG G + G P+ V + +NS G V ++
Sbjct: 3274 WGDGDFGKLGRG-----------------GSDGCAIPMNVER--LNSLG------VTQVE 3308
Query: 296 CGGRHSAVVTDAGALLTFGWGLY 318
CG + S +T G + T+G G Y
Sbjct: 3309 CGAQFSLALTRDGEVWTWGKGDY 3331
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + G + TWG D + S +H P +V A G HCV+
Sbjct: 4204 GSQFSVALCQCGSVYTWGKGDYHRLGH-GSYEHVRRPMRVTGMQGKMIVSIATGSLHCVA 4262
Query: 119 VTEAGEVYTWG 129
T+ GEVYTWG
Sbjct: 4263 CTDTGEVYTWG 4273
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 58/129 (44%), Gaps = 35/129 (27%)
Query: 198 FFTLSPCLVTLNPGVK---ITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLG-SRIK 251
+ T++P LV PG++ IT+V+ GRH L S G W WG G +G+LG G + +
Sbjct: 509 YDTMTPHLV---PGLESKTITQVSCHSLGRHYLCRSSCGGAWSWGIGEDGRLGHGDTAAR 565
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
P P L H A + V +A G SAV+T GAL
Sbjct: 566 DAPQP-----LHHLAHHE---------------------VVRVAAGLACSAVITSRGALY 599
Query: 312 TFGWGLYGQ 320
T+G G G+
Sbjct: 600 TWGRGAQGR 608
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-------RIKMVPT 255
P VT G I +A G H + +D G+V+ WG EGQLG G+ R+ M
Sbjct: 4239 PMRVTGMQGKMIVSIATGSLHCVACTDTGEVYTWGDNDEGQLGDGTTLAAQRPRLLMALQ 4298
Query: 256 PHLIPCL 262
++IP L
Sbjct: 4299 VNIIPTL 4305
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVP 254
P L+T G+++ +A GG H+ L+ G+++ WG G G+LG G S +++P
Sbjct: 4081 PKLITALSGLEVVCIACGGAHSACLTARGRIYTWGKGRYGRLGHGDSEDQLIP 4133
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWA 114
G F+LA + G++ TWG D Y G + P EA V+ A G
Sbjct: 3310 GAQFSLALTRDGEVWTWGKGD-----YFRLGHGCDAHVRRPTLVEALRGRRVIHVAVGAL 3364
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT +V+ WG
Sbjct: 3365 HCLAVTSENQVWAWG 3379
>gi|326914182|ref|XP_003203406.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Meleagris
gallopavo]
Length = 537
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 103/265 (38%), Gaps = 52/265 (19%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + V+++G GT +S I+ LCG G G L T
Sbjct: 38 NEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCT 97
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
E G++ WG G S L +G + P + T V++ A G H ++++ G
Sbjct: 98 -EDGEVYAWGH---NGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDG 153
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
++Y WG+ C G GS ST Q P+ +R + +
Sbjct: 154 DLYAWGYNNC----------GQVGS---GSTANQ---------PTPRRVSNCLQDKMVVG 191
Query: 184 SAREESENPAS-------------------GDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
A ++ + A G+ L+PC V GV I ++A G HT
Sbjct: 192 IACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHT 251
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSR 249
L L+D G ++ WG GQLG G++
Sbjct: 252 LALTDEGLLYAWGANTYGQLGTGNK 276
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 61/137 (44%), Gaps = 30/137 (21%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP-CLEH-----AA 266
K+ +VA G H++ LS G ++ WGY GQ+G GS PTP + CL+ A
Sbjct: 135 KVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQ-PTPRRVSNCLQDKMVVGIA 193
Query: 267 SGKDRPL-LVRQGSV-----NSSGKAGRSY-----------------VKEIACGGRHSAV 303
G+ + +V G V N +G+ G + +IACG H+
Sbjct: 194 CGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLA 253
Query: 304 VTDAGALLTFGWGLYGQ 320
+TD G L +G YGQ
Sbjct: 254 LTDEGLLYAWGANTYGQ 270
>gi|8131930|gb|AAF73141.1|AF148798_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 683
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 27/113 (23%)
Query: 210 PGV--KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
PG+ K+ +VA GG HT++L++ V+ +G G GQLGLG+ + P I EH
Sbjct: 239 PGIPGKVVQVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAI---EHIKD 294
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
K + IACG H+A++TD G + TFG G +G+
Sbjct: 295 QK---------------------ISFIACGENHTALITDMGLMYTFGDGRHGK 326
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 57/138 (41%), Gaps = 29/138 (21%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL- 262
C+ L P K+ A G HTL+ ++ G+V+ G EGQLGLG + T HLI
Sbjct: 80 CVKALKPE-KVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGD-TEERSTFHLISFFT 137
Query: 263 ------EHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IAC 296
+ +A L G + NS G+ G V I+C
Sbjct: 138 SQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWISC 197
Query: 297 GGRHSAVVTDAGALLTFG 314
G HSA VT G L TFG
Sbjct: 198 GYYHSAFVTTEGQLYTFG 215
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 23/92 (25%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
KI+ +A G HT +++DMG ++ +G G G+LGLG T IP L
Sbjct: 296 KISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENS---TNQFIPTL---------- 342
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
R V+ ++CGG H+ V
Sbjct: 343 ----------CSNFLRFIVQLVSCGGCHTLVF 364
>gi|327261091|ref|XP_003215365.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Anolis
carolinensis]
Length = 530
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 100/244 (40%), Gaps = 52/244 (21%)
Query: 30 GTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
GT +S I +P +L G + + G + ++E G++ WG G S L
Sbjct: 54 GTGDNQSTI---VPKKLESLSGKRIRSLSYGSGPHVVLSTEDGEVYAWGH---NGYSQLG 107
Query: 88 SGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
+G + P + T V++ A G H ++++ G+VY WG+ C G
Sbjct: 108 NGTTNQGVTPIQVCTNLLIKKVIEVACGSHHSLALSSDGDVYAWGYNNC----------G 157
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD--EFF--- 199
GS ST Q P+ ++ + + S A ++ + A D E +
Sbjct: 158 QVGS---GSTANQ---------PTPRKVSNCLQTKIVVSIACGQTSSVAIVDNGEVYGWG 205
Query: 200 --------------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
L+PC V GV I ++A G HTL L+D G ++ WG GQLG
Sbjct: 206 YNGNGQLGLGNNGNQLTPCRVAALQGVCIMQIACGYAHTLALTDEGLMYSWGANTYGQLG 265
Query: 246 LGSR 249
G++
Sbjct: 266 TGNK 269
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 68/150 (45%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
++P V N +K + +VA G H+L LS G V+ WGY GQ+G GS PTP +
Sbjct: 115 VTPIQVCTNLLIKKVIEVACGSHHSLALSSDGDVYAWGYNNCGQVGSGSTANQ-PTPRKV 173
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
CL+ A G+ + +V G V N +G+ G
Sbjct: 174 SNCLQTKIVVSIACGQTSSVAIVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALQGVC 233
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +IACG H+ +TD G + ++G YGQ
Sbjct: 234 IMQIACGYAHTLALTDEGLMYSWGANTYGQ 263
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S P P ++ K V CG ++A ++G++ WG
Sbjct: 148 VYAWGYNNCGQVGSGSTANQPTPRKVSNCLQTKIVVSIACGQTSSVAIVDNGEVYGWG-Y 206
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L + + TP +++ A G+AH +++T+ G +Y+WG
Sbjct: 207 NGNGQLGLGNNGNQLTPCRVAALQGVCIMQIACGYAHTLALTDEGLMYSWG 257
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 64/157 (40%), Gaps = 32/157 (20%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIK- 251
+GD T+ P + G +I ++ G G H ++ ++ G+V+ WG+ G QLG G+ +
Sbjct: 55 TGDNQSTIVPKKLESLSGKRIRSLSYGSGPHVVLSTEDGEVYAWGHNGYSQLGNGTTNQG 114
Query: 252 ----MVPTPHLIPCLEHAASGKDRPL-LVRQGSV-----NSSGKAGR------------- 288
V T LI + A G L L G V N+ G+ G
Sbjct: 115 VTPIQVCTNLLIKKVIEVACGSHHSLALSSDGDVYAWGYNNCGQVGSGSTANQPTPRKVS 174
Query: 289 -----SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V IACG S + D G + +GWG G
Sbjct: 175 NCLQTKIVVSIACGQTSSVAIVDNGEV--YGWGYNGN 209
>gi|114595107|ref|XP_001160807.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Pan troglodytes]
Length = 984
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 67/152 (44%), Gaps = 31/152 (20%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL- 258
+ +P +T G+KI +V+ G H+L LS QV+ WG GQLGLG +P
Sbjct: 116 SFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRV 175
Query: 259 -----IPCLEHAASGKDRPLLVRQGS-----VNSSGK---AGRSY--------------- 290
IP + AA G L G+ NSSG+ +GR+
Sbjct: 176 RSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKN 235
Query: 291 --VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V I+CG H+AV+T G + TFG GQ
Sbjct: 236 LGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQ 267
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 31/134 (23%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAA 266
+ + V+ G H+L + G+V+ WG G EGQLG+G ++ TP I L +
Sbjct: 75 LTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVS 134
Query: 267 SGKDRPLLVRQGSV------NSSGKAG--------------RSY----VKEIACGGRHSA 302
G L + + S NS G+ G RS + ++A GG HS
Sbjct: 135 CGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSF 194
Query: 303 VVTDAGALLTFGWG 316
++ G +FGWG
Sbjct: 195 ALSLCGT--SFGWG 206
>gi|328872836|gb|EGG21203.1| hypothetical protein DFA_01078 [Dictyostelium fasciculatum]
Length = 413
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 82/209 (39%), Gaps = 65/209 (31%)
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G H + + GE+YTWGW SF
Sbjct: 120 GHYHSMIINNKGELYTWGW----------------SSF---------------------- 141
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
AG E K K ++ E S P DE+ + ++ + KVAAG H+L L G
Sbjct: 142 AGGE--KENKETNYNEWS--PRLVDEYVLDNDSIL---QSRDVVKVAAGWGHSLALDSEG 194
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
+WGWG+ EGQL + PT H P+L R V SS + V
Sbjct: 195 SIWGWGWNAEGQLFVD------PTRH--------------PVLHRPTKVFSSTSSSSLVV 234
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
++I CG +SA +TD G + G G +GQ
Sbjct: 235 RDIICGSDYSAFITDKGHVYMVGSGEHGQ 263
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 52/260 (20%)
Query: 53 KDVCGGGCGF--ALATSESGKLITWG-SADDEGQSYLTSGKHGE----TPEPFPLPTEA- 104
D+ CG ++ + G+L TWG S+ G+ + E + + L ++
Sbjct: 112 NDIKSLHCGHYHSMIINNKGELYTWGWSSFAGGEKENKETNYNEWSPRLVDEYVLDNDSI 171
Query: 105 ----SVVKAAAGWAHCVSVTEAGEVYTWGW-----------RECVPS--AKVTRDFGSAG 147
VVK AAGW H +++ G ++ WGW R V KV S+
Sbjct: 172 LQSRDVVKVAAGWGHSLALDSEGSIWGWGWNAEGQLFVDPTRHPVLHRPTKVFSSTSSSS 231
Query: 148 SFQKDST--GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCL 205
+D SA T++ +GE R + A + P +
Sbjct: 232 LVVRDIICGSDYSAFITDKGHVYMVGSGEHGQLGRGNTEA--------------SAYPQI 277
Query: 206 VTLNPGVKITKVAAGGRHTLILSDM-GQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLE 263
V G +I KVA G H+L+L + GQ++ G+ G GQLG+G + ++V TP +P
Sbjct: 278 VQGLQGQRIDKVACGFGHSLLLDEQQGQLFSLGWNGNGQLGVGDTLNRLVATPVSMP--- 334
Query: 264 HAASGKDRPLLVRQGSVNSS 283
DR +L+ G +S+
Sbjct: 335 ------DRVVLIGAGRAHSA 348
>gi|293344154|ref|XP_001066157.2| PREDICTED: RCC1 domain-containing protein 1-like [Rattus
norvegicus]
Length = 330
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 103/250 (41%), Gaps = 47/250 (18%)
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD-FGSA 146
+G+H P PL V + +A W++ VT G V G C +A RD + S
Sbjct: 25 NGQHA-VHSPEPLHAADDVCQVSASWSYTALVTRGGRVELSGSVSC--AADGCRDVWASE 81
Query: 147 GSF--QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN-PASGDEFFTLS- 202
G Q++ +G + L + P GE + + S A+ + E+ P S TL
Sbjct: 82 GLLVVQRNKSGSGTEL--QAWVPGSALQGEPLWVQNLASGAKAQGEDEPGSEPRMGTLPL 139
Query: 203 -PCLVT-----------LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
PC L P +++ ++ G H L+L + GQV+ WG G GQLG GS +
Sbjct: 140 LPCARAYMTPQPPFCQPLAPELRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGS-L 198
Query: 251 KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGAL 310
+ P L+ L+ + E+A GG HS V++ G +
Sbjct: 199 EAELEPRLLEALQGL------------------------RMAEVAAGGWHSVCVSETGDI 234
Query: 311 LTFGWGLYGQ 320
+GW GQ
Sbjct: 235 YIWGWNESGQ 244
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 28/136 (20%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL----GSRIKMVPTP 256
L P L+ G+++ +VAAGG H++ +S+ G ++ WG+ GQL L G+ K V
Sbjct: 202 LEPRLLEALQGLRMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRSGTEKKTV--- 258
Query: 257 HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR----------------SYVKEIACGGRH 300
E A D L + ++ G S + +CG RH
Sbjct: 259 -----REEATELNDDGLRGEEAALADVGAPAHFIAIQPFPALLDLPLGSDAVKASCGSRH 313
Query: 301 SAVVTDAGALLTFGWG 316
+AVVT G L T+GWG
Sbjct: 314 TAVVTRTGELYTWGWG 329
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 80/193 (41%), Gaps = 44/193 (22%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL E+G++ +WG G+HG+ E P EA + +
Sbjct: 169 GAEHALLLCEAGQVFSWGG-----------GRHGQLGHGSLEAELEPRLLEALQGLRMAE 217
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V V+E G++Y WGW E A TR + ++++T
Sbjct: 218 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTRSGTEKKTVREEATELN----------D 267
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLS--PCLVTLNPGVKITKVAAGGRHTLI 226
D GEE +A + PA F + P L+ L G K + G RHT +
Sbjct: 268 DGLRGEE--------AALADVGAPA---HFIAIQPFPALLDLPLGSDAVKASCGSRHTAV 316
Query: 227 LSDMGQVWGWGYG 239
++ G+++ WG+G
Sbjct: 317 VTRTGELYTWGWG 329
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+PFP LP + VKA+ G H VT GE+YTWGW E
Sbjct: 290 QPFPALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGE 330
>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 1800
Score = 58.5 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 76/326 (23%), Positives = 132/326 (40%), Gaps = 71/326 (21%)
Query: 28 LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQ-- 83
LP + + +L+P+P + + K CG+ S G+L TWG+ + +GQ
Sbjct: 1010 LPVVTVDPDLLLNPMPPLV---KNEKKAVSVACGWEHIAVISSDGELFTWGN-NSQGQLG 1065
Query: 84 SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE--------CVP 135
L GK+ TP + ++ + G H V+V ++ ++Y+WG P
Sbjct: 1066 HGLNVGKYQSTPRRVETFKSSPIIMISCGGEHSVAVDQSFQIYSWGSSRYGQLGHGVLTP 1125
Query: 136 S--AKVTRDFGSAGSFQKDSTGKQSALPTEQAPP-------SDKRAGEEVVKRRKTSSAR 186
K DF +TG + +++ + G K R
Sbjct: 1126 QNLPKKIEDFTGGQKVLAIATGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRI 1185
Query: 187 EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
E SE +V ++ G +IT +AAG H+++ D G ++ WG +GQLG
Sbjct: 1186 ETSE--------------IVGIH-GERITAIAAGHSHSIMCLDNGDIYSWGANSKGQLGH 1230
Query: 247 GSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
G+ I+ P I L K +P++ +I+CG H+ +++
Sbjct: 1231 GN-IEKSLRPKQIDEL------KGKPII------------------KISCGHFHTVAISE 1265
Query: 307 AGALLTFGWGLYGQRMAKCLAGDGIN 332
++ + WG G+ M CL G+G N
Sbjct: 1266 LNSV--YCWG-QGEHM--CL-GNGSN 1285
Score = 57.4 bits (137), Expect = 9e-06, Method: Composition-based stats.
Identities = 82/309 (26%), Positives = 119/309 (38%), Gaps = 88/309 (28%)
Query: 53 KDVCGGGCGFALAT--------SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA 104
+D GG A+AT +SG L T+G +D GQ L + K+ P+ E
Sbjct: 1133 EDFTGGQKVLAIATGYAHTMVLKKSGDLFTFG-WNDSGQLGLGNFKN----RAVPMRIET 1187
Query: 105 S---------VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
S + AAG +H + + G++Y+WG A G G+ +K
Sbjct: 1188 SEIVGIHGERITAIAAGHSHSIMCLDNGDIYSWG-------ANSKGQLGH-GNIEKSLRP 1239
Query: 156 KQSALPTEQAPPSDKRAGEEVVK----RRKTSSARE----------ESENPASGDEFFTL 201
KQ D+ G+ ++K T + E E +G L
Sbjct: 1240 KQI----------DELKGKPIIKISCGHFHTVAISELNSVYCWGQGEHMCLGNGSNKNEL 1289
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLIL------SDMGQVWGWGYGGEGQLGLGSRIKM--- 252
SP ++ KI KV G HT + SD G V+ G G G+LG G +K
Sbjct: 1290 SPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVYICGGGEHGKLGTGGDLKTPFF 1349
Query: 253 -VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
P P +IP S+NS G S G SA++T+ GAL
Sbjct: 1350 DKPHPAVIP------------------SLNSMNIVGFS------SGSEFSAIITNNGALY 1385
Query: 312 TFGWGLYGQ 320
T+G+G +GQ
Sbjct: 1386 TWGYGNFGQ 1394
>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
harrisii]
Length = 4483
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 25/112 (22%)
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
N VK V +GGRH + L+ G+++ WG G +G+LG SR+
Sbjct: 2796 NYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNC---------------- 2839
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
D+P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 2840 -DKPRLIE------ALKTKR--IRDIACGSSHSAAITSSGELYTWGLGEYGR 2882
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 3781 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 3831
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V +IA GG HSA +T AG L T+G G Y
Sbjct: 3832 PC--------DRPRVI---------ESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRY 3874
Query: 319 GQ 320
G+
Sbjct: 3875 GR 3876
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ ++ K G A+A + GK+ +WG DD G+ S + + P
Sbjct: 2786 PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDD-GKLGHFSRMNCDKPRL 2844
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 2845 IEALKTKRIRDIACGSSHSAAITSSGELYTWGLGE----------YGRLG--HGDNT--- 2889
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 2890 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2942
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG G+ + V P
Sbjct: 2943 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH-VRKPQ 3001
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD G + +G
Sbjct: 3002 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDTGQVYAWGDND 3037
Query: 318 YGQR 321
+GQ+
Sbjct: 3038 HGQQ 3041
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 3959 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4017
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4018 CTEDGEVYTWG 4028
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 108/280 (38%), Gaps = 61/280 (21%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
GG A + GK+ G A T+G+ G + P+P + + VVK
Sbjct: 2750 AGGSKSLFAVTVEGKVYACGEA--------TNGRLGLGISSGTVPIPRQITALSNYVVKK 2801
Query: 110 AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
A G H +++T G++++WG D G G F + + K + +
Sbjct: 2802 VAVHSGGRHAMALTVDGKIFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 2851
Query: 167 PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
A TSS E GD L P +V + G ++ +VA G
Sbjct: 2852 RIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 2911
Query: 221 GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
R TL L+D G V+ WG G G+LG G + G + P + +
Sbjct: 2912 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 2953
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+N G V +I CG + S +T +G + T+G G Y
Sbjct: 2954 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDY 2986
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 2992 GTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT 3045
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 15/84 (17%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----S 105
K G LA S G++ +WG A+D GK G +P P E+
Sbjct: 3795 KVAVNSGGKHCLALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIE 3846
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
VV AAG AH +T AG++YTWG
Sbjct: 3847 VVDIAAGGAHSACITAAGDLYTWG 3870
>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
Length = 4839
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 25/112 (22%)
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
N VK V +GGRH + L+ G+++ WG G +G+LG SR+
Sbjct: 3048 NYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNC---------------- 3091
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
D+P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3092 -DKPRLIE------ALKTKR--IRDIACGSSHSAAITSSGELYTWGLGEYGR 3134
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL P LV I K+AA G H L LS G+V+ WG G G+LG G + + P
Sbjct: 482 TLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPL-EEPK 540
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
LI L SGK +V IACG +SA +T G L T+G G
Sbjct: 541 LISAL--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 580
Query: 318 YGQ 320
YG+
Sbjct: 581 YGR 583
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4032 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4082
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V +IA GG HSA +T AG L T+G G Y
Sbjct: 4083 PC--------DRPRVI---------ESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRY 4125
Query: 319 GQ 320
G+
Sbjct: 4126 GR 4127
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ ++ K G A+A + GK+ +WG DD G+ S + + P
Sbjct: 3038 PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDD-GKLGHFSRMNCDKPRL 3096
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3097 IEALKTKRIRDIACGSSHSAAITSSGELYTWGLGE----------YGRLG--HGDNT--- 3141
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3142 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3194
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG G+ + V P
Sbjct: 3195 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH-VRKPQ 3253
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD G + +G
Sbjct: 3254 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDTGQVYAWGDND 3289
Query: 318 YGQR 321
+GQ+
Sbjct: 3290 HGQQ 3293
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
D+ CG F++A ++ G++ TWG D++ + T +H P+ V+ AA
Sbjct: 659 DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE-EHVRYPKLLEGLKGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4210 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4268
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4269 CTEDGEVYTWG 4279
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 108/280 (38%), Gaps = 61/280 (21%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
GG A + GK+ G A T+G+ G + P+P + + VVK
Sbjct: 3002 AGGSKSLFAVTVEGKVYACGEA--------TNGRLGLGISSGTVPIPRQITALSNYVVKK 3053
Query: 110 AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
A G H +++T G++++WG D G G F + + K + +
Sbjct: 3054 VAVHSGGRHAMALTVDGKIFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3103
Query: 167 PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
A TSS E GD L P +V + G ++ +VA G
Sbjct: 3104 RIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3163
Query: 221 GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
R TL L+D G V+ WG G G+LG G + G + P + +
Sbjct: 3164 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 3205
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+N G V +I CG + S +T +G + T+G G Y
Sbjct: 3206 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDY 3238
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 594 IPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 648
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + +VK G +++T+ G+VYTWG
Sbjct: 649 PKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWG 683
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 92/244 (37%), Gaps = 54/244 (22%)
Query: 46 LCGGDSWKDVCGGGCG--FALATSESGKLITWG----------SADDEGQSYLTSGKHGE 93
L G + K V CG ++ A + G+L TWG S++D+ L +G G
Sbjct: 545 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKG- 603
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
+ V +G A ++VTE G+V++WG D+G G D
Sbjct: 604 --------LKVIDVSCGSGDAQTLAVTENGQVWSWG----------DGDYGKLGRGGSDG 645
Query: 154 TGKQSALPTEQAPPSDKRAGEEVVKRRKTSS--------------AREESENPASGDEFF 199
+ +K ++VK R S + +++ G E
Sbjct: 646 CKTPKLI--------EKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEH 697
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P L+ G K+ VAAG H L L++ +V WG + Q RI P P +
Sbjct: 698 VRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITK-PEPAAL 756
Query: 260 PCLE 263
P L+
Sbjct: 757 PGLD 760
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 27/116 (23%)
Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
P LVT G+K+ V+ +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 595 PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 653
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
L+ + ++ CG + S +T G + T+G G
Sbjct: 654 KLQDLD------------------------IVKVRCGSQFSIALTKDGQVYTWGKG 685
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3244 GTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT 3297
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4057 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHS 4108
Query: 117 VSVTEAGEVYTWG 129
+T AG+++TWG
Sbjct: 4109 ACITAAGDLFTWG 4121
>gi|149033232|gb|EDL88033.1| potential ubiquitin ligase, isoform CRA_a [Rattus norvegicus]
Length = 449
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 31/147 (21%)
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
+ P + G+KI +V+ G H+L LS+ GQV+ WG +GQLGLG+ + +P
Sbjct: 113 ISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQK 172
Query: 259 IPCLE-----HAASGKDRPLLV------------RQGSVNSSGKAGRSYVKE-------- 293
+ LE A+G + R G + SG + + + +
Sbjct: 173 VKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALK 232
Query: 294 ------IACGGRHSAVVTDAGALLTFG 314
I+CG H++V+T+ G + TFG
Sbjct: 233 TLNVVYISCGYEHTSVLTEDGQVFTFG 259
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 28/111 (25%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG--SRIKMVPTPHLIPCLEHAASGK 269
V I V+ G H++ + G+V+ WG G EGQLG+G I +PT
Sbjct: 73 VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTK------------- 119
Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+NS AG + +++CG HS +++ G + ++G GQ
Sbjct: 120 ----------INS--LAGIKII-QVSCGHYHSLALSEDGQVFSWGSNRQGQ 157
>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
gallopavo]
Length = 4815
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 25/112 (22%)
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
N VK V +GGRH + L+ G+++ WG G +G+LG SR+
Sbjct: 3024 NYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNC---------------- 3067
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
D+P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3068 -DKPRLIE------ALKTKR--IRDIACGSSHSAAITSSGELYTWGLGEYGR 3110
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL P LV I K+AA G H L LS G+V+ WG G G+LG G + + P
Sbjct: 458 TLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPL-EEPK 516
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
LI L SGK +V IACG +SA +T G L T+G G
Sbjct: 517 LISAL--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 556
Query: 318 YGQ 320
YG+
Sbjct: 557 YGR 559
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4008 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4058
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V +IA GG HSA +T AG L T+G G Y
Sbjct: 4059 PC--------DRPRVI---------ESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRY 4101
Query: 319 GQ 320
G+
Sbjct: 4102 GR 4103
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ ++ K G A+A + GK+ +WG DD G+ S + + P
Sbjct: 3014 PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDD-GKLGHFSRMNCDKPRL 3072
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3073 IEALKTKRIRDIACGSSHSAAITSSGELYTWGLGE----------YGRLG--HGDNT--- 3117
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3118 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3170
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG G+ + V P
Sbjct: 3171 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH-VRKPQ 3229
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD G + +G
Sbjct: 3230 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDTGQVYAWGDND 3265
Query: 318 YGQR 321
+GQ+
Sbjct: 3266 HGQQ 3269
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
D+ CG F++A ++ G++ TWG D++ + T +H P+ V+ AA
Sbjct: 635 DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE-EHVRYPKLLEGLKGKKVIDVAA 693
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 694 GSTHCLALTEDSEVHSWG 711
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4186 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4244
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4245 CTEDGEVYTWG 4255
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 108/280 (38%), Gaps = 61/280 (21%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
GG A + GK+ G A T+G+ G + P+P + + VVK
Sbjct: 2978 AGGSKSLFAVTVEGKVYACGEA--------TNGRLGLGISSGTVPIPRQITALSNYVVKK 3029
Query: 110 AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
A G H +++T G++++WG D G G F + + K + +
Sbjct: 3030 VAVHSGGRHAMALTVDGKIFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3079
Query: 167 PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
A TSS E GD L P +V + G ++ +VA G
Sbjct: 3080 RIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3139
Query: 221 GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
R TL L+D G V+ WG G G+LG G + G + P + +
Sbjct: 3140 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 3181
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+N G V +I CG + S +T +G + T+G G Y
Sbjct: 3182 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDY 3214
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 42 IPARLCGGDSWKDV---CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ET 94
IP + G K + CG G LA +E+G++ +WG D Y G+ G +T
Sbjct: 570 IPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKT 624
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P+ + +VK G +++T+ G+VYTWG
Sbjct: 625 PKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWG 659
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 92/244 (37%), Gaps = 54/244 (22%)
Query: 46 LCGGDSWKDVCGGGCG--FALATSESGKLITWG----------SADDEGQSYLTSGKHGE 93
L G + K V CG ++ A + G+L TWG S++D+ L +G G
Sbjct: 521 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKG- 579
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
+ V +G A ++VTE G+V++WG D+G G D
Sbjct: 580 --------LKVIDVSCGSGDAQTLAVTENGQVWSWG----------DGDYGKLGRGGSDG 621
Query: 154 TGKQSALPTEQAPPSDKRAGEEVVKRRKTSS--------------AREESENPASGDEFF 199
+ +K ++VK R S + +++ G E
Sbjct: 622 CKTPKLI--------EKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEH 673
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P L+ G K+ VAAG H L L++ +V WG + Q RI P P +
Sbjct: 674 VRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITK-PEPAAL 732
Query: 260 PCLE 263
P L+
Sbjct: 733 PGLD 736
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 27/116 (23%)
Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
P LVT G+K+ V+ +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 571 PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 629
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
L+ + ++ CG + S +T G + T+G G
Sbjct: 630 KLQDLD------------------------IVKVRCGSQFSIALTKDGQVYTWGKG 661
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3220 GTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT 3273
Score = 37.4 bits (85), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4033 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHS 4084
Query: 117 VSVTEAGEVYTWG 129
+T AG+++TWG
Sbjct: 4085 ACITAAGDLFTWG 4097
>gi|410211612|gb|JAA03025.1| hect domain and RLD 6 [Pan troglodytes]
Length = 1020
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 67/152 (44%), Gaps = 31/152 (20%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL- 258
+ +P +T G+KI +V+ G H+L LS QV+ WG GQLGLG +P
Sbjct: 116 SFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRV 175
Query: 259 -----IPCLEHAASGKDRPLLVRQGS-----VNSSGK---AGRSY--------------- 290
IP + AA G L G+ NSSG+ +GR+
Sbjct: 176 RSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKN 235
Query: 291 --VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V I+CG H+AV+T G + TFG GQ
Sbjct: 236 LGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQ 267
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 31/134 (23%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAA 266
+ + V+ G H+L + G+V+ WG G EGQLG+G ++ TP I L +
Sbjct: 75 LTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVS 134
Query: 267 SGKDRPLLVRQGSV------NSSGKAG--------------RSY----VKEIACGGRHSA 302
G L + + S NS G+ G RS + ++A GG HS
Sbjct: 135 CGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSF 194
Query: 303 VVTDAGALLTFGWG 316
++ G +FGWG
Sbjct: 195 ALSLCGT--SFGWG 206
>gi|118397447|ref|XP_001031056.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila]
gi|89285378|gb|EAR83393.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila
SB210]
Length = 1146
Score = 58.5 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 68/261 (26%), Positives = 97/261 (37%), Gaps = 63/261 (24%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSAD 79
VY WG GT +K S PA + + K V CG + A +++G + TWG
Sbjct: 653 VYSWG---GTLHKKVGQRSGKPAPIQQLNK-KGVIQVDCGDYHSAAITQNGDIYTWGGGG 708
Query: 80 ---DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
++GQ L K E PE +VK + G H +++T E++ WG
Sbjct: 709 QDYNKGQLGLGHVKDIENPEKLKFFEGKKIVKVSCGQFHTMALTSENELFGWG------- 761
Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPT------------------EQAPPSDKRAGEEVV- 177
AG F + T K P E + + K G +
Sbjct: 762 ---------AGEFGELGTSKHEYTPIRVKVNFNQYNILYENILFENSIQNIKCGGHHTLL 812
Query: 178 -----------KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
R+ SEN +TL+ KI K+AAG H+L
Sbjct: 813 LTNNGYIYSSGYGRQGQLGLRNSENQCEFQLVWTLTK--------KKIIKIAAGWNHSLA 864
Query: 227 LSDMGQVWGWGYGGEGQLGLG 247
LSD ++ G+G GQLGLG
Sbjct: 865 LSDQNDIFACGHGARGQLGLG 885
Score = 57.8 bits (138), Expect = 7e-06, Method: Composition-based stats.
Identities = 56/264 (21%), Positives = 98/264 (37%), Gaps = 74/264 (28%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG LA +++ ++ +WG G + G+ P P + V++ G H
Sbjct: 638 ACGDYHTLALTDTDQVYSWG-----GTLHKKVGQRSGKPAPIQQLNKKGVIQVDCGDYHS 692
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
++T+ G++YTWG G + K G
Sbjct: 693 AAITQNGDIYTWG--------------GGGQDYNKGQLGLGHV----------------- 721
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
++ ENP +FF G KI KV+ G HT+ L+ +++GW
Sbjct: 722 ----------KDIENPEK-LKFFE----------GKKIVKVSCGQFHTMALTSENELFGW 760
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G G G+LG +H + + Q ++ + ++ I C
Sbjct: 761 GAGEFGELGTS---------------KHEYTPIRVKVNFNQYNILYENILFENSIQNIKC 805
Query: 297 GGRHSAVVTDAGALLTFGWGLYGQ 320
GG H+ ++T+ G + + G+G GQ
Sbjct: 806 GGHHTLLLTNNGYIYSSGYGRQGQ 829
>gi|332233496|ref|XP_003265938.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Nomascus leucogenys]
Length = 1020
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 62/154 (40%), Gaps = 35/154 (22%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +P +T G+KI +V+ G H+L LS QV+ WG GQLGLG +P +
Sbjct: 116 SFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRV 175
Query: 260 PCLE---------------------------------HAASGKDRPLLVRQGSVNSSGKA 286
LE A SG++ P V+ S G
Sbjct: 176 RSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVP--VQSNKPLSVGAL 233
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V I+CG H+AV+T G + TFG GQ
Sbjct: 234 KNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQ 267
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 61/141 (43%), Gaps = 35/141 (24%)
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE- 263
L TLN + V+ G H+L + G+V+ WG G EGQLG+G ++ TP I L
Sbjct: 72 LETLN----VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITTLNG 127
Query: 264 ----HAASGKDRPLLVRQGSV------NSSGKAG--------------RSY----VKEIA 295
+ G L + + S NS G+ G RS + ++A
Sbjct: 128 IKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVA 187
Query: 296 CGGRHSAVVTDAGALLTFGWG 316
GG HS ++ G +FGWG
Sbjct: 188 AGGAHSFALSLCGT--SFGWG 206
>gi|332233498|ref|XP_003265939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Nomascus leucogenys]
Length = 984
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 62/155 (40%), Gaps = 35/155 (22%)
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
+ +P +T G+KI +V+ G H+L LS QV+ WG GQLGLG +P
Sbjct: 115 ISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQR 174
Query: 259 IPCLE---------------------------------HAASGKDRPLLVRQGSVNSSGK 285
+ LE A SG++ P V+ S G
Sbjct: 175 VRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVP--VQSNKPLSVGA 232
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V I+CG H+AV+T G + TFG GQ
Sbjct: 233 LKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQ 267
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 61/141 (43%), Gaps = 35/141 (24%)
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE- 263
L TLN + V+ G H+L + G+V+ WG G EGQLG+G ++ TP I L
Sbjct: 72 LETLN----VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITTLNG 127
Query: 264 ----HAASGKDRPLLVRQGSV------NSSGKAG--------------RSY----VKEIA 295
+ G L + + S NS G+ G RS + ++A
Sbjct: 128 IKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVA 187
Query: 296 CGGRHSAVVTDAGALLTFGWG 316
GG HS ++ G +FGWG
Sbjct: 188 AGGAHSFALSLCGT--SFGWG 206
>gi|114595105|ref|XP_001160851.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Pan troglodytes]
Length = 1020
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 67/152 (44%), Gaps = 31/152 (20%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL- 258
+ +P +T G+KI +V+ G H+L LS QV+ WG GQLGLG +P
Sbjct: 116 SFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRV 175
Query: 259 -----IPCLEHAASGKDRPLLVRQGS-----VNSSGK---AGRSY--------------- 290
IP + AA G L G+ NSSG+ +GR+
Sbjct: 176 RSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKN 235
Query: 291 --VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V I+CG H+AV+T G + TFG GQ
Sbjct: 236 LGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQ 267
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 31/134 (23%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAA 266
+ + V+ G H+L + G+V+ WG G EGQLG+G ++ TP I L +
Sbjct: 75 LTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVS 134
Query: 267 SGKDRPLLVRQGSV------NSSGKAG--------------RSY----VKEIACGGRHSA 302
G L + + S NS G+ G RS + ++A GG HS
Sbjct: 135 CGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSF 194
Query: 303 VVTDAGALLTFGWG 316
++ G +FGWG
Sbjct: 195 ALSLCGT--SFGWG 206
>gi|403350728|gb|EJY74833.1| hypothetical protein OXYTRI_03788 [Oxytricha trifallax]
Length = 1271
Score = 58.5 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 46/151 (30%), Positives = 68/151 (45%), Gaps = 38/151 (25%)
Query: 208 LNPGV-------KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
LNP V +I ++A G H+L+L+D V+ WG G EGQLGL I++ TP I
Sbjct: 488 LNPTVLKPLRDKRIVQIACGENHSLVLTDKADVFAWGRGFEGQLGLSKSIEIASTPQYIK 547
Query: 261 C-----LEHAASGKDRPL-LVRQGSVNSSGKA-----GRSYVKEI--------------- 294
+ + A+G L + + GSV G+A G +E+
Sbjct: 548 SFYGKPVSYIAAGSQYSLAITKDGSVWGWGEAKLGQLGMGKQREVRLPTKISFGDDENAK 607
Query: 295 -----ACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ G HSA +T G L T+G+ +GQ
Sbjct: 608 NFIQCSAGYGHSAALTQEGHLYTWGFNNFGQ 638
Score = 38.9 bits (89), Expect = 3.5, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 16/83 (19%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASV---------V 107
G ++LA ++ G + WG A GQ L GK E LPT+ S +
Sbjct: 558 AAGSQYSLAITKDGSVWGWGEAK-LGQ--LGMGKQREVR----LPTKISFGDDENAKNFI 610
Query: 108 KAAAGWAHCVSVTEAGEVYTWGW 130
+ +AG+ H ++T+ G +YTWG+
Sbjct: 611 QCSAGYGHSAALTQEGHLYTWGF 633
>gi|327268361|ref|XP_003218966.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Anolis carolinensis]
Length = 788
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 25/108 (23%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
K++KVA GG HT++L++ G V+ +G G GQLG G+ + P + L
Sbjct: 244 KVSKVACGGGHTVVLAE-GDVYTFGLGQYGQLGHGTFVFETSEPKTVDHL---------- 292
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G+ + IACG H+A++T+ G + TFG G +G+
Sbjct: 293 --------------GKHKICHIACGENHTALITENGLMYTFGDGRHGK 326
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 62/138 (44%), Gaps = 29/138 (21%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL- 262
C+ L P K+ A G HTLI ++ G V+ G EGQLGLG + T HLI
Sbjct: 80 CVKALKPE-KVKLAACGRNHTLICTEQGNVYAAGGNSEGQLGLGD-TEERSTFHLISFFT 137
Query: 263 -EH-----AASGKDRPLLVRQGSV-----NSSGKAG---RSYVKE------------IAC 296
+H AA +L G + NS G+ G ++YV I+C
Sbjct: 138 KQHKIKQLAAGSYTSAVLTEDGQLVMWGDNSEGQIGLGDKAYVSVPHQVDIGKPVSCISC 197
Query: 297 GGRHSAVVTDAGALLTFG 314
G HSA++T G L TFG
Sbjct: 198 GYYHSALITQDGELYTFG 215
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 38/169 (22%)
Query: 188 ESENPASGDEFFTLSPCLVTLNPGVKI-------TKVAAGGRHTLILSDMGQVWGWGYGG 240
E + P SG FT C N K ++ G HT ++++ G+++ +G
Sbjct: 5 EEQVPESG-AVFTFGKCKFAENVPSKFWFKNDKPLHISCGDEHTSVVTENGKLYMFGSNN 63
Query: 241 EGQLGLGSRIKMVPTPHLIPCL-----EHAASGKDRPLL-VRQGSV-----NSSGKAG-- 287
GQLG GS+ V P + L + AA G++ L+ QG+V NS G+ G
Sbjct: 64 WGQLGFGSK-NAVNKPTCVKALKPEKVKLAACGRNHTLICTEQGNVYAAGGNSEGQLGLG 122
Query: 288 ----------------RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +K++A G SAV+T+ G L+ +G GQ
Sbjct: 123 DTEERSTFHLISFFTKQHKIKQLAAGSYTSAVLTEDGQLVMWGDNSEGQ 171
>gi|449665602|ref|XP_002165309.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Hydra magnipapillata]
Length = 731
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 58/120 (48%), Gaps = 25/120 (20%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
+SP LV I ++ AGG H+L L+ G ++ WG GQLGLG +
Sbjct: 108 VSPQLVRDLSNCPIIQICAGGHHSLALTISGTIFAWGKNSFGQLGLGDQ----------- 156
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+DR + S+N GK +V+ I+CG HS ++T AG + TFG G GQ
Sbjct: 157 --------QDRLFPTKIQSMN--GK----HVRYISCGEEHSVLLTSAGRVYTFGCGSSGQ 202
>gi|293356015|ref|XP_218819.5| PREDICTED: RCC1 domain-containing protein 1-like [Rattus
norvegicus]
Length = 378
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 103/250 (41%), Gaps = 47/250 (18%)
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD-FGSA 146
+G+H P PL V + +A W++ VT G V G C +A RD + S
Sbjct: 25 NGQHA-VHSPEPLHAADDVCQVSASWSYTALVTRGGRVELSGSVSC--AADGCRDVWASE 81
Query: 147 GSF--QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN-PASGDEFFTLS- 202
G Q++ +G + L + P GE + + S A+ + E+ P S TL
Sbjct: 82 GLLVVQRNKSGSGTEL--QAWVPGSALQGEPLWVQNLASGAKAQGEDEPGSEPRMGTLPL 139
Query: 203 -PCLVT-----------LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
PC L P +++ ++ G H L+L + GQV+ WG G GQLG GS +
Sbjct: 140 LPCARAYMTPQPPFCQPLAPELRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGS-L 198
Query: 251 KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGAL 310
+ P L+ L+ + E+A GG HS V++ G +
Sbjct: 199 EAELEPRLLEALQGL------------------------RMAEVAAGGWHSVCVSETGDI 234
Query: 311 LTFGWGLYGQ 320
+GW GQ
Sbjct: 235 YIWGWNESGQ 244
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 64/140 (45%), Gaps = 28/140 (20%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL----GSRIKMVPTP 256
L P L+ G+++ +VAAGG H++ +S+ G ++ WG+ GQL L G+ K V
Sbjct: 202 LEPRLLEALQGLRMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRSGTEKKTV--- 258
Query: 257 HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR----------------SYVKEIACGGRH 300
E A D L + ++ G S + +CG RH
Sbjct: 259 -----REEATELNDDGLRGEEAALADVGAPAHFIAIQPFPALLDLPLGSDAVKASCGSRH 313
Query: 301 SAVVTDAGALLTFGWGLYGQ 320
+AVVT G L T+GWG YGQ
Sbjct: 314 TAVVTRTGELYTWGWGKYGQ 333
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 84/199 (42%), Gaps = 44/199 (22%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL E+G++ +WG G+HG+ E P EA + +
Sbjct: 169 GAEHALLLCEAGQVFSWGG-----------GRHGQLGHGSLEAELEPRLLEALQGLRMAE 217
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V V+E G++Y WGW E A TR + ++++T
Sbjct: 218 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTRSGTEKKTVREEATELND---------- 267
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSP--CLVTLNPGVKITKVAAGGRHTLI 226
D GEE +A + PA F + P L+ L G K + G RHT +
Sbjct: 268 DGLRGEE--------AALADVGAPA---HFIAIQPFPALLDLPLGSDAVKASCGSRHTAV 316
Query: 227 LSDMGQVWGWGYGGEGQLG 245
++ G+++ WG+G GQLG
Sbjct: 317 VTRTGELYTWGWGKYGQLG 335
>gi|47219820|emb|CAG03447.1| unnamed protein product [Tetraodon nigroviridis]
Length = 162
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
+ +VAAGG H++ +SD G ++ WG+ GQLGL SR P A+S +
Sbjct: 3 VIRVAAGGWHSVCISDGGDLYVWGWNETGQLGLPSRSLRRTLPQQSSPKAGASSAEAPHA 62
Query: 274 LVRQGSVNSSGKAGRSY--------VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+Q V S +A + + ++CG RH+A VT G L T+GWG Y Q
Sbjct: 63 GGKQEEVFISIQAFPALLDVSPSCEIMAVSCGSRHTAAVTTTGDLYTWGWGDYSQ 117
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 27/142 (19%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
V++ AAG H V +++ G++Y WGW E G S + LP + +
Sbjct: 3 VIRVAAGGWHSVCISDGGDLYVWGWNE-------------TGQLGLPSRSLRRTLPQQSS 49
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS--PCLVTLNPGVKITKVAAGGRH 223
P +AG + +EE F ++ P L+ ++P +I V+ G RH
Sbjct: 50 P----KAGASSAEAPHAGGKQEEV--------FISIQAFPALLDVSPSCEIMAVSCGSRH 97
Query: 224 TLILSDMGQVWGWGYGGEGQLG 245
T ++ G ++ WG+G QLG
Sbjct: 98 TAAVTTTGDLYTWGWGDYSQLG 119
>gi|281350338|gb|EFB25922.1| hypothetical protein PANDA_008494 [Ailuropoda melanoleuca]
Length = 197
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 76/169 (44%), Gaps = 30/169 (17%)
Query: 88 SGKHGET------PEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
G+HG+ EP P EA + + AAG H V V+EAG++Y WGW E A
Sbjct: 5 QGRHGQLGHGTLEAEPEPRLLEALQGLPMAEVAAGGWHSVCVSEAGDIYIWGWNESGQLA 64
Query: 138 KVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD 196
TR G + K+++G E + R+T+ A + + P
Sbjct: 65 LPTRSLAEDGKTVAKEASG----------------LNEGGSEGRRTARAEDGAPAPFIAL 108
Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
+ F P L+ L + + G RHT +++ G+++ WG+G GQLG
Sbjct: 109 QPF---PALLDLPQDADAVQASCGSRHTAVVTRTGELYTWGWGKYGQLG 154
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 64/147 (43%), Gaps = 45/147 (30%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L +R
Sbjct: 22 PRLLEALQGLPMAEVAAGGWHSVCVSEAGDIYIWGWNESGQLALPTR------------- 68
Query: 263 EHAASGKDRPLLVRQGS-VNSSGKAGRSYVK----------------------------E 293
+ +D + ++ S +N G GR + +
Sbjct: 69 ---SLAEDGKTVAKEASGLNEGGSEGRRTARAEDGAPAPFIALQPFPALLDLPQDADAVQ 125
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQ 320
+CG RH+AVVT G L T+GWG YGQ
Sbjct: 126 ASCGSRHTAVVTRTGELYTWGWGKYGQ 152
>gi|426344974|ref|XP_004039178.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Gorilla
gorilla gorilla]
Length = 982
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 67/152 (44%), Gaps = 31/152 (20%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL- 258
+ +P +T G+KI +V+ G H+L LS QV+ WG GQLGLG +P
Sbjct: 116 SFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRV 175
Query: 259 -----IPCLEHAASGKDRPLLVRQGS-----VNSSGK---AGRSY--------------- 290
IP + AA G L G+ NS+G+ +GR+
Sbjct: 176 RSLEGIPLAQVAAGGTHSFALSLCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKN 235
Query: 291 --VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V I+CG H+AV+T G + TFG GQ
Sbjct: 236 LGVVYISCGDEHTAVLTQDGKVFTFGDNCSGQ 267
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 31/132 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASG 268
+ V+ G H+L + G+V+ WG G EGQLG+G ++ TP I L + G
Sbjct: 77 VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCG 136
Query: 269 KDRPLLVRQGSV------NSSGKAG--------------RSY----VKEIACGGRHSAVV 304
L + + S NS G+ G RS + ++A GG HS +
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGTHSFAL 196
Query: 305 TDAGALLTFGWG 316
+ G +FGWG
Sbjct: 197 SLCGT--SFGWG 206
>gi|301117542|ref|XP_002906499.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262107848|gb|EEY65900.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1711
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 90/265 (33%), Gaps = 86/265 (32%)
Query: 58 GGCGFALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
GC +A ++SG +WG D G LT+ H P+ + + A+ + H
Sbjct: 416 NGCEHMIALTDSGLAYSWGYNDRGQLGHENLTTKVH--VPKLIESLKDKKLRYASVSYHH 473
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
+T++GE+Y +G +C G D T QS
Sbjct: 474 SAVITDSGELYAFGMNDC-------------GQLGLDHTQHQS----------------- 503
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+P LV G +I+ VA G HT+I + G ++
Sbjct: 504 --------------------------TPQLVKGFEGTEISMVACGLYHTIICTATGGLFA 537
Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
G GQLGLG RQ V S V +A
Sbjct: 538 CGKNDYGQLGLGHN--------------------------RQIKVASLVSLPNEMVSYVA 571
Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQ 320
G HS VVT++G +FG YGQ
Sbjct: 572 SGYYHSVVVTNSGRTFSFGRNDYGQ 596
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 51/125 (40%), Gaps = 24/125 (19%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
+ L P + VK + G H + L+D G + WGY GQLG + V
Sbjct: 393 ERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDSGLAYSWGYNDRGQLGHENLTTKVHV 452
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
P LI L KD+ L R SV SY HSAV+TD+G L FG
Sbjct: 453 PKLIESL------KDKKL--RYASV--------SY--------HHSAVITDSGELYAFGM 488
Query: 316 GLYGQ 320
GQ
Sbjct: 489 NDCGQ 493
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 80/198 (40%), Gaps = 17/198 (8%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
++SG+L +G +D GQ L +H TP+ + A G H + T G
Sbjct: 476 VITDSGELYAFG-MNDCGQLGLDHTQHQSTPQLVKGFEGTEISMVACGLYHTIICTATGG 534
Query: 125 VYTWGWRECVPSAKVTRDFGSAG--SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR--- 179
++ G D+G G ++ +LP E VV
Sbjct: 535 LFACG----------KNDYGQLGLGHNRQIKVASLVSLPNEMVSYVASGYYHSVVVTNSG 584
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
R S R + G++ P +V L+ ++ + G HT++LS+ GQV+ +G
Sbjct: 585 RTFSFGRNDYGQLGIGNKVHQNVPNVVALSANTRMVRATCGCYHTVLLSEQGQVFVFGRN 644
Query: 240 GEGQLG-LGSRIKMVPTP 256
+GQLG GS ++P P
Sbjct: 645 NKGQLGNRGSADALLPVP 662
>gi|91204161|emb|CAJ71814.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 411
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 109/293 (37%), Gaps = 48/293 (16%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA--SVVKAAAGWAH 115
GG +L G + WG + GQ G P F + + VV AAGW H
Sbjct: 43 GGGSHSLVLKPDGTVWAWG-GNHAGQL----GDGTTNPRKFAIQVKGLEDVVSIAAGWEH 97
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
++V G V+ WG FG G ++ + T +
Sbjct: 98 NLAVKSDGTVWAWG----------NNRFGQLGDGTNENRNTPVKVKTIKDVTEIDAGFYH 147
Query: 176 VVKRRKTSSA----REESENPASGDEFFTLSPCLVT-LNPGVKITKVAAGGRHTLILSDM 230
+ + + E + G + P V LN + V+ G H L+L
Sbjct: 148 SIALQSDGTVWVWGNNELDQLGDGTKSDAYKPMQVQGLN---NVVAVSGGNHHNLVLKAD 204
Query: 231 GQVWGWGYGGEGQLGLGSRIK-MVPTP-HLIPCLEHAASGKDRPLLVR-QGSV-----NS 282
G +WGWG G GQLG G+ + +PTP + ASG + + V+ GS+ N+
Sbjct: 205 GTIWGWGANGYGQLGDGTMTESSIPTPVYDFNGAVFIASGNNYNVAVKADGSIWGWGMNT 264
Query: 283 SGKAGR---------------SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G+ G + IA GG H+ ++ G +L+ G+ GQ
Sbjct: 265 YGQLGNGTQTNSKIPIRINGLNNSVSIATGGYHALILQQDGTVLSMGYNRTGQ 317
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 34/236 (14%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG L G + WG+ G L G E+ P P+ V A+G + V
Sbjct: 193 GGNHHNLVLKADGTIWGWGA---NGYGQLGDGTMTESSIPTPVYDFNGAVFIASGNNYNV 249
Query: 118 SVTEAGEVYTWGWRE-------CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
+V G ++ WG ++K+ + +TG AL +Q
Sbjct: 250 AVKADGSIWGWGMNTYGQLGNGTQTNSKIPIRINGLNNSVSIATGGYHALILQQ------ 303
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
+ V + + S ++ TL ++ + +AAG H+L L
Sbjct: 304 ---DGTVLSMGYNRTGQLGTGATSNYQYTTLKVHGLS-----DVVSIAAGYYHSLALKKD 355
Query: 231 GQVWGWGYGGEGQLGLG----------SRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
G +W WG GQLG G S+IK+ T P + A++ P LV+
Sbjct: 356 GTIWAWGNNEYGQLGDGTLNYKKLPILSQIKLDQTITPAPKEDSASANTPIPTLVK 411
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 100/282 (35%), Gaps = 37/282 (13%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LA G + WG+ + GQ L G + P + T V + AG+ H +++ G
Sbjct: 99 LAVKSDGTVWAWGN-NRFGQ--LGDGTNENRNTPVKVKTIKDVTEIDAGFYHSIALQSDG 155
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
V+ WG E D G+ Q S V+K T
Sbjct: 156 TVWVWGNNEL--------DQLGDGTKSDAYKPMQVQGLNNVVAVSGGNHHNLVLKADGTI 207
Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
+ GD T S + +A+G + + + G +WGWG GQ
Sbjct: 208 WGWGANGYGQLGDGTMTESSIPTPVYDFNGAVFIASGNNYNVAVKADGSIWGWGMNTYGQ 267
Query: 244 LGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVRQ-GSVNSSGKA------------- 286
LG G++ P I L ++ A+G L+++Q G+V S G
Sbjct: 268 LGNGTQTNS-KIPIRINGLNNSVSIATGGYHALILQQDGTVLSMGYNRTGQLGTGATSNY 326
Query: 287 --------GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G S V IA G HS + G + +G YGQ
Sbjct: 327 QYTTLKVHGLSDVVSIAAGYYHSLALKKDGTIWAWGNNEYGQ 368
>gi|403356078|gb|EJY77629.1| Hect E3 ubiquitin ligase [Oxytricha trifallax]
Length = 1178
Score = 58.5 bits (140), Expect = 5e-06, Method: Composition-based stats.
Identities = 69/309 (22%), Positives = 109/309 (35%), Gaps = 80/309 (25%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGK----------HGETPEPFPLPTEASV 106
GG G +A G + +WG A GQ L S K + TP L V
Sbjct: 29 AGGDGHTVAVDIKGNVYSWG-ASACGQLGLASMKDLPTDVEGYPYQPTPRIIELLQSVKV 87
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
++ A G AH V++T+ G++Y+W + KD G P + P
Sbjct: 88 IQIACGDAHTVALTQDGKLYSW-----GGGGCGQLGHPDTSAMPKDEDG----CPYQPKP 138
Query: 167 PSDKRAGEEVVKRRKTSSAR------------------------EESENPASGD--EFFT 200
VK+ A + S PA D +
Sbjct: 139 KLIVVLKNLEVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSFPADEDGYPYQP 198
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-------- 252
+ C+ L P K+ + G HT++L+D G+++ +G G GQLG G+ +M
Sbjct: 199 IPRCVTALKP-FKLIHASCGDVHTMVLTDQGEIYCFGGGSCGQLGFGNISQMPLDVDSCP 257
Query: 253 -VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
+P P I L+ ++ ++CG HS ++ G +
Sbjct: 258 FMPVPKKIESLQGI------------------------FIVSLSCGDSHSMALSREGHVY 293
Query: 312 TFGWGLYGQ 320
+G YGQ
Sbjct: 294 AWGEATYGQ 302
Score = 42.4 bits (98), Expect = 0.29, Method: Composition-based stats.
Identities = 54/236 (22%), Positives = 88/236 (37%), Gaps = 67/236 (28%)
Query: 90 KHGETPEPFPLPTE----ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS 145
+ G +P PL + + + A G H V+V G VY+WG C
Sbjct: 5 REGYPFQPHPLEIDMLRNKGIYQVAGGDGHTVAVDIKGNVYSWGASAC------------ 52
Query: 146 AGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCL 205
Q L + + P+D + +P +
Sbjct: 53 ----------GQLGLASMKDLPTDVEGYP------------------------YQPTPRI 78
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
+ L VK+ ++A G HT+ L+ G+++ WG GG GQ P +P E
Sbjct: 79 IELLQSVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQ-------LGHPDTSAMPKDEDG 131
Query: 266 ASGKDRP-LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +P L+V ++ VK++ACG H+ V + G L ++G G GQ
Sbjct: 132 CPYQPKPKLIVVLKNLE---------VKQVACGKAHTVAVLNNGHLYSWGAGACGQ 178
>gi|395855000|ref|XP_003799962.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Otolemur
garnettii]
Length = 816
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 26/118 (22%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P LV+ P K+ +VA GG HTL+L++ V+ +G G GQLGLG+ I P + L
Sbjct: 235 PQLVSSIPD-KVIQVACGGGHTLVLTEES-VYAFGLGQFGQLGLGTFIFETSEPKV---L 289
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
E+ K + I+CG H+A++TD G + TFG G +G+
Sbjct: 290 EYVKGEK---------------------IISISCGENHTAMITDTGGIYTFGDGRHGK 326
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 57/145 (39%), Gaps = 31/145 (21%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
C+ L P K+ A G HT+I ++ G V+ G EGQLGLG I +
Sbjct: 80 CIKALKPE-KVKFAACGRTHTIISTEGGNVYATGGNNEGQLGLGDTDERDTFHLISFFTS 138
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
H I L +A L G + NS G+ G V I+
Sbjct: 139 QHKIKQL--SAGSNTSAALTEDGQLFMWGDNSEGQIGLKDVTNVCVPHQVTIGKPISWIS 196
Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQ 320
CG HSA VT G L TFG G+
Sbjct: 197 CGYYHSAFVTIDGELYTFGESESGK 221
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR---IKMVP 254
F T P ++ G KI ++ G HT +++D G ++ +G G G+LGLG + P
Sbjct: 281 FETSEPKVLEYVKGEKIISISCGENHTAMITDTGGIYTFGDGRHGKLGLGLENFTNRFFP 340
Query: 255 TP 256
TP
Sbjct: 341 TP 342
>gi|395541970|ref|XP_003772909.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC6 [Sarcophilus harrisii]
Length = 1032
Score = 58.5 bits (140), Expect = 5e-06, Method: Composition-based stats.
Identities = 66/293 (22%), Positives = 106/293 (36%), Gaps = 66/293 (22%)
Query: 75 WGSADDE-GQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
W ++ GQ + K + P P VV + G H +++ + G +Y+WG
Sbjct: 59 WSCGNNSYGQLGRKNIKKSKRPAPIQALETQVVVSVSCGKEHSLAICKTGRIYSWG---- 114
Query: 134 VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA 193
GS G Q ++P A S + + + + ++ + +
Sbjct: 115 ---------SGSRGQLGIKEVKDQCSIPKNIAALSRDKIIQVSCGHYHSIALTQDGKVFS 165
Query: 194 SGDEFF-----------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
GD SP V G+ + +VAAGG H+ LS G +GWG EG
Sbjct: 166 WGDNDHGQLGLGTNFPSQASPQRVNSLDGIPLAQVAAGGSHSFALSLSGTSYGWGRNKEG 225
Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASG------------------KDRPLLVRQGSV---- 280
QL L + V + + C+ H A +R + G V
Sbjct: 226 QLALSGKNASVVSINY--CIWHEAEALTCKRSNSIKEFQGLKELLNRSRQIADGKVLTFG 283
Query: 281 -NSSGKAGRSYV---------------KEIACGGRHS-AVVTDAGALLTFGWG 316
N+SG+ G + +IACG H+ A +G +L+FG G
Sbjct: 284 SNNSGQLGHGLITKPRGPQIVESAELFSQIACGSHHTLAYACTSGQVLSFGCG 336
Score = 45.4 bits (106), Expect = 0.037, Method: Composition-based stats.
Identities = 41/139 (29%), Positives = 59/139 (42%), Gaps = 30/139 (21%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HA 265
G +I + A G RH+L+L G VW G GQLG IK P I LE
Sbjct: 36 GQQIVQAACGERHSLLLLADGTVWSCGNNSYGQLGR-KNIKKSKRPAPIQALETQVVVSV 94
Query: 266 ASGKDRPLLV-RQGSVNS--SGKAGRSYVKE---------------------IACGGRHS 301
+ GK+ L + + G + S SG G+ +KE ++CG HS
Sbjct: 95 SCGKEHSLAICKTGRIYSWGSGSRGQLGIKEVKDQCSIPKNIAALSRDKIIQVSCGHYHS 154
Query: 302 AVVTDAGALLTFGWGLYGQ 320
+T G + ++G +GQ
Sbjct: 155 IALTQDGKVFSWGDNDHGQ 173
>gi|195996231|ref|XP_002107984.1| hypothetical protein TRIADDRAFT_52018 [Trichoplax adhaerens]
gi|190588760|gb|EDV28782.1| hypothetical protein TRIADDRAFT_52018 [Trichoplax adhaerens]
Length = 347
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 106/290 (36%), Gaps = 88/290 (30%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCGGGCGFA-LATSESGKLITWGSADDEGQSYLTSGK 90
+P+K P L+ P + GG GG F + +E+G+L G ++ GQ L
Sbjct: 48 TPQKMPNLNFKPKWIGGG-------GGHSVFLDVYVAETGELYACG-WNNNGQLGLEHQD 99
Query: 91 HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
+ + LP K A GW H ++++ G++Y+WG + FG G
Sbjct: 100 NVTRLQKLSLPIRMQ--KVACGWNHTIALSVEGKLYSWG----------SNAFGQLGH-S 146
Query: 151 KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNP 210
S G PT SD+ EF
Sbjct: 147 PCSRGSIINTPTLIEDISDR--------------------------EFI----------- 169
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
AG RHT + GQ W WG +GQLG+G R+ +V P LI L
Sbjct: 170 -----DTCAGLRHTHAVEACGQTWSWGACKKGQLGIGERMDIVEKPVLISTLRG------ 218
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+R VK++ G HSA +T+ G + +G YGQ
Sbjct: 219 ----IR--------------VKKVVAGSYHSACLTECGEVFCWGSNRYGQ 250
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASV----VKAAAGWAHCVSVTEA 122
+E G++ WGS + GQ L E+ P + +E+ V + +GW+H V+V E
Sbjct: 235 TECGEVFCWGS-NRYGQCTLADKT--ESLIPVKISSESCVNKCFIDIHSGWSHVVAVVEG 291
Query: 123 GEVYTWG 129
G VY+WG
Sbjct: 292 GIVYSWG 298
>gi|348680650|gb|EGZ20466.1| hypothetical protein PHYSODRAFT_493908 [Phytophthora sojae]
Length = 1453
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 110/298 (36%), Gaps = 54/298 (18%)
Query: 43 PARLCGG----DSWKDVCGGGCGFALATSESGK-LITWG------SADDEGQ---SYLTS 88
P RL G ++ FAL + G+ + WG AD + S +
Sbjct: 430 PVRLIGAFVTLNAKLTTLAASSTFALGVQDDGRSIFAWGRCLPRLHADQDSSNNASQMVC 489
Query: 89 GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS 148
H TP + A VV+ A G H +++TE G V++WG+ D G G
Sbjct: 490 LTHA-TPRRLQVRLPARVVEVACGLRHALALTEDGMVFSWGFN----------DHGQLGH 538
Query: 149 FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTL 208
++ +++ D+R GE+ + AS C
Sbjct: 539 GSAETLAARTSGRVRYTSYYDERTGED-------------EDYLASPTRLLYFEGCAAQQ 585
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM----VPTPHLIPCLEH 264
+ + V +G + + LS G V+ WG EGQLG G + + H+I +
Sbjct: 586 AEPIPVAHVCSGDYYCMALSRAGDVFTWGEASEGQLGHGETHEFYQVALADRHMISS-AY 644
Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQR 321
+ P+L + ++AC G HS A+ T+ F WG +G+R
Sbjct: 645 TYLAQPEPVLA----------LSDVRITQVACRGNHSVALSTERSGSRLFEWGNWGRR 692
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
F P + GV++ +A G H+L ++ G+V+ WG G GQLG
Sbjct: 1326 FVAHPTRIPALAGVELKLLACGSAHSLAVTQRGKVFSWGRGARGQLG 1372
>gi|348525468|ref|XP_003450244.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
[Oreochromis niloticus]
Length = 536
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 91/225 (40%), Gaps = 31/225 (13%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG--KHGETPEPFPLPTE 103
LCG G G +AT++ G++ WG G S L +G HG TP
Sbjct: 80 LCGKKIVSLSYGTGPHVVIATAD-GEVYAWGH---NGYSQLGNGTTNHGLTPALVSTNLL 135
Query: 104 AS-VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
+ V + A G H +++T GEVY WG+ ++G ST Q
Sbjct: 136 SKRVTEVACGSHHTIALTTDGEVYAWGY-------------NNSGQVGSGSTANQPTPRR 182
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGV 212
+ +K + + + + E G+ +PC + GV
Sbjct: 183 VSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQGV 242
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTP 256
I +VA G HTL L+D G V+ WG GQLG G++ + +PTP
Sbjct: 243 NIVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKSNQALPTP 287
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L+P LV+ N K +T+VA G HT+ L+ G+V+ WGY GQ+G GS PTP +
Sbjct: 125 LTPALVSTNLLSKRVTEVACGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQ-PTPRRV 183
Query: 260 -PCLE-----HAASGKDRPLLVRQG------SVNSSGKAGR-----------------SY 290
CL+ + A G+ + V N +G+ G
Sbjct: 184 SSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQGVN 243
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ ++ACG H+ +TD G + +G YGQ
Sbjct: 244 IVQVACGYAHTLALTDEGFVYAWGANSYGQ 273
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 22/173 (12%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S P P R+ K V CG ++A ++G++ WG
Sbjct: 158 VYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGY- 216
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ L + + +TP ++V+ A G+AH +++T+ G VY WG
Sbjct: 217 NCNGQLGLGNNGNQQTPCRIAALQGVNIVQVACGYAHTLALTDEGFVYAWG--------- 267
Query: 139 VTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
A S+ + TG +S ALPT ++ TS+A+ +S
Sbjct: 268 -------ANSYGQLGTGNKSNQALPTPINTDKERIVEVAACHTSHTSAAKTQS 313
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + + G KI ++ G G H +I + G+V+ WG+ G QLG G+
Sbjct: 66 GDLQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATADGEVYAWGHNGYSQLGNGT----- 120
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L P L V+++ + R V E+ACG H+ +T G +
Sbjct: 121 -TNHGLTPAL-----------------VSTNLLSKR--VTEVACGSHHTIALTTDGEVYA 160
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 161 WGYNNSGQ 168
>gi|449680679|ref|XP_002161042.2| PREDICTED: uncharacterized protein LOC100209924 [Hydra
magnipapillata]
Length = 809
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 115/315 (36%), Gaps = 59/315 (18%)
Query: 22 VYMWGYLP----GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGS 77
+Y WG P G E + + L G D CG LA S +G++ +WG
Sbjct: 375 IYTWGASPKGVLGHGEETEELFPRVVEALLGRDIRTVACGTE--HTLAVSVNGEMFSWGC 432
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW------- 130
G+ L + P ++ + H SVTE+GE+YT+G
Sbjct: 433 GRG-GKLGLKNILDRYMPLKIGAFENVNITFVSCNELHSASVTESGELYTFGRSGPHLGY 491
Query: 131 -----RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA 185
++ VP KV DF +A + S G + + GE S
Sbjct: 492 TTEDRKQAVPR-KV--DFSTANKIKAVSCGLEFTIALNSE-------GE------LYSFG 535
Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
+ + +G P L+ GV+I+KV+ G +H ++ G VW WG GQLG
Sbjct: 536 KNDCGQLGAGHFNDIEEPYLIKHLNGVRISKVSCGSKHVGAVTVNGDVWLWGSNEFGQLG 595
Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
H IP + +++I CGG H+ V++
Sbjct: 596 TDK-----LEAHDIP-------------------FEAPSTFWNEEIQDIKCGGSHTVVLS 631
Query: 306 DAGALLTFGWGLYGQ 320
G + FG G GQ
Sbjct: 632 CTGVVYVFGNGQSGQ 646
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 110/282 (39%), Gaps = 59/282 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP--TEASVVKAAAGWAHC 116
G F +A + G+L ++G +D GQ L +G + EP+ + + K + G H
Sbjct: 518 GLEFTIALNSEGELYSFGK-NDCGQ--LGAGHFNDIEEPYLIKHLNGVRISKVSCGSKHV 574
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE--QAPPSDKRAGE 174
+VT G+V+ WG E FG G+ + ++ P+ D + G
Sbjct: 575 GAVTVNGDVWLWGSNE----------FGQLGTDKLEAHDIPFEAPSTFWNEEIQDIKCGG 624
Query: 175 EVVKRRKTSSAREESENPASGD--------EFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
+ N SG + +PC++++ KI KV G HT
Sbjct: 625 SHTVVLSCTGVVYVFGNGQSGQLGVAVNQTSPYITNPCILSMPNNTKIAKVDCGIEHTAA 684
Query: 227 LSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
+++ G ++ WG G G+LG G + + VPT L+ L +
Sbjct: 685 VTESGCLYTWGNGSRGRLGHGDHQDRYVPT--LVESLAYKQ------------------- 723
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQRMAKCLA 327
V+ IACG H+A A + W ++ Q C+A
Sbjct: 724 -----VQSIACGAYHTA------ACVIRAW-VHDQETKSCMA 753
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Query: 47 CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASV 106
CGG + G + +SG+L G A ++ Y+T+ P +P +
Sbjct: 622 CGGSHTVVLSCTGVVYVFGNGQSGQL---GVAVNQTSPYITN------PCILSMPNNTKI 672
Query: 107 VKAAAGWAHCVSVTEAGEVYTWG 129
K G H +VTE+G +YTWG
Sbjct: 673 AKVDCGIEHTAAVTESGCLYTWG 695
>gi|218185898|gb|EEC68325.1| hypothetical protein OsI_36421 [Oryza sativa Indica Group]
Length = 425
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 106/270 (39%), Gaps = 59/270 (21%)
Query: 65 ATSESGKLITWGSADDEGQSYL--TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
A + GKL WG + GQ L +GK TP ++ V A G H ++ TE
Sbjct: 139 AVTADGKLFAWGR-NSSGQLGLGKRAGKVVSTPRKVDCLADSRVKMVALGSEHSIATTEE 197
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
GEV +WG G G K S S +E P K +KR
Sbjct: 198 GEVLSWG----------AAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAA 247
Query: 183 S----------------SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
+ E SGDE L P +V P + +VA GG HT +
Sbjct: 248 GMLHSACIDEKGTLFIFGQKTEKGFGRSGDE---LRPTVVEEVPFSE--EVACGGYHTCV 302
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
++D G ++ WG G LGLG MV +P ++ +S P
Sbjct: 303 VTDSGDLYSWGSNENGCLGLGG-TDMVRSPEVLK-----SSLFKFP-------------- 342
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
V +++CG +H+AV++ G + T+GWG
Sbjct: 343 ----VSKVSCGWKHTAVIS-GGDIYTWGWG 367
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 120/312 (38%), Gaps = 98/312 (31%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP-TEASVVKAAAGWA 114
CGG L +ESG++ G +D GQ + S + EP + + VV+ +AG
Sbjct: 80 CGGA--HTLFLTESGRVFAAG-LNDFGQLGIGSSVT-HSLEPIEVSGFDEKVVEVSAGNH 135
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H +VT G+++ WG ++S+G+ KRAG+
Sbjct: 136 HSCAVTADGKLFAWG---------------------RNSSGQLGL---------GKRAGK 165
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
V RK CL ++ VA G H++ ++ G+V
Sbjct: 166 VVSTPRKVD--------------------CLAD----SRVKMVALGSEHSIATTEEGEVL 201
Query: 235 GWGYGGEGQLGLGSRIKMV--------PTPHLIPCLE------------HAASGKDRPLL 274
WG G G+LG G + ++ TP LI L+ H+A ++ L
Sbjct: 202 SWGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTL 261
Query: 275 VRQGSVNSSGKAGRS-------------YVKEIACGGRHSAVVTDAGALLTFGWGLYGQR 321
G G GRS + +E+ACGG H+ VVTD+G L + +G
Sbjct: 262 FIFGQKTEKG-FGRSGDELRPTVVEEVPFSEEVACGGYHTCVVTDSGDLYS-----WGSN 315
Query: 322 MAKCLAGDGINM 333
CL G +M
Sbjct: 316 ENGCLGLGGTDM 327
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 58/152 (38%), Gaps = 43/152 (28%)
Query: 200 TLSPCLVTLNPGVKI----TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
T P +T PG +A GG HTL L++ G+V+ G GQLG+GS +
Sbjct: 57 TACPFFLTGRPGDDDDDPPASLACGGAHTLFLTESGRVFAAGLNDFGQLGIGSSV----- 111
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
H + +E SG D ++ E++ G HS VT G L +G
Sbjct: 112 THSLEPIE--VSGFDEKVV------------------EVSAGNHHSCAVTADGKLFAWGR 151
Query: 316 GLYGQ--------------RMAKCLAGDGINM 333
GQ R CLA + M
Sbjct: 152 NSSGQLGLGKRAGKVVSTPRKVDCLADSRVKM 183
>gi|166240420|ref|XP_640165.2| ankyrin repeat-containing protein [Dictyostelium discoideum AX4]
gi|165988589|gb|EAL66176.2| ankyrin repeat-containing protein [Dictyostelium discoideum AX4]
Length = 919
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
+I +A G H+L + D+GQV+ WG G G+LGLG+ +VPTP LI + S +
Sbjct: 247 RIKSIACGTHHSLAMDDLGQVYSWGNGASGRLGLGNDFSIVPTPTLISVINRFGSNE 303
>gi|431902378|gb|ELK08879.1| RCC1 and BTB domain-containing protein 2 [Pteropus alecto]
Length = 621
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 96/235 (40%), Gaps = 42/235 (17%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL K C G G LAT+E G++ TWG S L +G P
Sbjct: 159 PRRLDSLSGKKIACFSYGSGPHVILATTE-GEIFTWG---HNAYSQLGNGTTNHGLVPCH 214
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG + ++G ST
Sbjct: 215 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTAN 261
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--------------ASGDEFFTLS 202
Q +P + + + S A ++ +SG++ +
Sbjct: 262 Q-PIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNGNGQLGLGSSGNQS---T 317
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
PC + G+ + +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 318 PCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWGANSYGQLGTGNKSNQSYPTP 372
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 210 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 268
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 269 TGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNGNGQLGLGSSGNQSTPCRIAALQGIC 328
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 329 VQRVACGYAHTLVLTDEGQVYVWGANSYGQ 358
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 72/172 (41%), Gaps = 22/172 (12%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 243 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGY- 301
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ L S + TP V + A G+AH + +T+ G+VY WG
Sbjct: 302 NGNGQLGLGSSGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWG--------- 352
Query: 139 VTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
A S+ + TG +S + PT A D+ TS+A+ +
Sbjct: 353 -------ANSYGQLGTGNKSNQSYPTPVAVEKDRIIEIAACHSTHTSAAKTQ 397
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI + G G H ++ + G+++ WG+ QLG G+
Sbjct: 151 GDIQSTIEPRRLDSLSGKKIACFSYGSGPHVILATTEGEIFTWGHNAYSQLGNGT----- 205
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 206 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 245
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 246 WGYNNSGQ 253
>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
Length = 4817
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 27/110 (24%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+K V +GGRH + L+ G+V+ WG G +G+LG SR+ C D+
Sbjct: 3002 IKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN---------C--------DK 3044
Query: 272 PLLVRQGSVNSSGKAGRS-YVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ +A RS V++IACGG HSA + G L T+G G YG+
Sbjct: 3045 PRLI---------EALRSKRVRDIACGGSHSAAIISNGDLYTWGLGEYGR 3085
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 61/121 (50%), Gaps = 27/121 (22%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG G +G+LG G+R
Sbjct: 4011 TPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGKLGHGNR---------S 4061
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
PC DRP + + GK V +IA GG HSA +T G L ++G G YG
Sbjct: 4062 PC--------DRPRAIE----SLRGKE----VVDIAAGGAHSACITSTGELYSWGKGRYG 4105
Query: 320 Q 320
+
Sbjct: 4106 R 4106
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 61/134 (45%), Gaps = 35/134 (26%)
Query: 189 SENPASGDEFFTLSPCLVTLNPGVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGL 246
S P S E TL+ ++I K+AA G H L L+ G V+ WG G G+LG
Sbjct: 461 SAEPQSMHEISTLA--------DIEIIKLAAHSEGSHCLALTSEGDVYSWGNGDFGKLGH 512
Query: 247 GSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
G + C D P+L+ + G+S V +ACG HSA +T
Sbjct: 513 GDTVT---------C--------DSPMLINE-------LHGKSVVN-VACGSHHSAAITA 547
Query: 307 AGALLTFGWGLYGQ 320
+G L T+G G +G+
Sbjct: 548 SGELFTWGRGSFGR 561
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 121/341 (35%), Gaps = 108/341 (31%)
Query: 11 NEKMEECKETVVYMWGYLPGTSP--EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSE 68
E + C ++ WG+L + +P P+P L D+ C S
Sbjct: 396 QEAHKVCGAQELFAWGWLSTSDATCHNTPTTIPLPNDL------DDIIQVAC------SS 443
Query: 69 SGKLITWGSADDEGQSY-LTSGKHGETPEPFPLPTEASVVKAAAGW--AHCVSVTEAGEV 125
+ LI + G+ Y +T+ ++ + ++K AA +HC+++T G+V
Sbjct: 444 NSLLILLRT----GRVYKMTNSAEPQSMHEISTLADIEIIKLAAHSEGSHCLALTSEGDV 499
Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA 185
Y+WG DFG G
Sbjct: 500 YSWG----------NGDFGKLGH------------------------------------- 512
Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
GD SP L+ G + VA G H+ ++ G+++ WG G G+LG
Sbjct: 513 ---------GDTVTCDSPMLINELHGKSVVNVACGSHHSAAITASGELFTWGRGSFGRLG 563
Query: 246 LGSRIKMVPTPHLIPCLEHAA-------SGKDRPL-LVRQGSVNS-----SGKAGRS--- 289
LGS + + TP L+ L SG + + L GSV S GK GR
Sbjct: 564 LGS-TEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTGSVYSWGDGEYGKLGRGGSE 622
Query: 290 --------------YVKEIACGGRHSAVVTDAGALLTFGWG 316
V + CG ++SA V GA+ T+G G
Sbjct: 623 GCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNGAVFTWGNG 663
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG++ TWG D Y G H P+ V
Sbjct: 3162 VCQIECGAQFSLALTKSGQVWTWGKGD-----YFRLGHGTDAHVRKPQLVETLKGKKVTH 3216
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC+SV + G+VY WG
Sbjct: 3217 VAVGALHCLSVLDNGQVYAWG 3237
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 105/278 (37%), Gaps = 66/278 (23%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
A+A + GK+ +WG DD G+ S + + P V A G +H ++
Sbjct: 3014 AMALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALRSKRVRDIACGGSHSAAIISN 3072
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA--GEEVVK-- 178
G++YTWG E +G G T Q P +A G+ V++
Sbjct: 3073 GDLYTWGLGE----------YGRLGHGDN----------TTQLRPKLVKALEGQRVIQVA 3112
Query: 179 ---RRKTSSAREESENPAS------------GDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
R + A +S S G E ++ + LN GV + ++ G +
Sbjct: 3113 LGSRDAQTLALTDSGTVYSWGDGDFGKLGRGGSEGCSVPHPIERLN-GVGVCQIECGAQF 3171
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
+L L+ GQVW WG G +LG G+ V P L+ L+
Sbjct: 3172 SLALTKSGQVWTWGKGDYFRLGHGTDAH-VRKPQLVETLK-------------------- 3210
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQR 321
GK V +A G H V D G + +G +GQ+
Sbjct: 3211 GKK----VTHVAVGALHCLSVLDNGQVYAWGDNDHGQQ 3244
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 123/320 (38%), Gaps = 63/320 (19%)
Query: 19 ETVVYMWGYLPGTS---PEKSPILSP-IPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
+T V++WG P+ S I +P I L + V GG ++ GKL
Sbjct: 2913 QTQVFVWGLNDKDQLGGPKGSKIKTPGINETLSTLKCVQIV--GGSKSLFCVTQDGKLFA 2970
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---GWAHCVSVTEAGEVYTWGW 130
G A + S G P+P L + + V+K A G H +++T G+V++WG
Sbjct: 2971 CGEATNGRLGLGISA--GNVPQPRQLTSLSQYVIKKVAVHSGGRHAMALTVDGKVFSWG- 3027
Query: 131 RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE 190
D G G F + + K + ++ KR + +++ +
Sbjct: 3028 ---------EGDDGKLGHFSRMNCDKPRLIEALRS----KRVRDIACGGSHSAAIISNGD 3074
Query: 191 ----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGY 238
GD L P LV G ++ +VA G R TL L+D G V+ WG
Sbjct: 3075 LYTWGLGEYGRLGHGDNTTQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGTVYSWGD 3134
Query: 239 GGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
G G+LG G + PH I L N G V +I CG
Sbjct: 3135 GDFGKLGRGGS-EGCSVPHPIERL------------------NGVG------VCQIECGA 3169
Query: 299 RHSAVVTDAGALLTFGWGLY 318
+ S +T +G + T+G G Y
Sbjct: 3170 QFSLALTKSGQVWTWGKGDY 3189
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G E P T G KI +A G H + +D G+V+ WG EGQLG G+ +
Sbjct: 4216 GTEDHIRRPRRCTTLQGKKIVSIACGSLHCVACTDAGEVYTWGDNDEGQLGDGT-TNAIQ 4274
Query: 255 TPHLIPCLE 263
P L+ L+
Sbjct: 4275 RPRLVAALQ 4283
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P LV G K+T VA G H L + D GQV+ WG GQ G S + P L+ L
Sbjct: 3203 PQLVETLKGKKVTHVAVGALHCLSVLDNGQVYAWGDNDHGQQG-NSTTTVNRKPALVQGL 3261
Query: 263 E 263
E
Sbjct: 3262 E 3262
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 102/282 (36%), Gaps = 75/282 (26%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
V +G HC++++ GEVY+WG G K G +S P ++
Sbjct: 4026 VAINSGGKHCLALSAEGEVYSWG----------------EGEDGKLGHGNRS--PCDRPR 4067
Query: 167 PSDKRAGEEVVKRRK--------TSSAREES------ENPASGDEFFTLSPCLVTLNPGV 212
+ G+EVV TS+ S GD P LV G
Sbjct: 4068 AIESLRGKEVVDIAAGGAHSACITSTGELYSWGKGRYGRLGHGDSEDQTKPKLVDALKGY 4127
Query: 213 KITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLG----SRIKM-VPTPHLIPCLEHA 265
++T VA +G TL ++D VW WG G G+LG G ++ M + + ++
Sbjct: 4128 RVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKVPMKIDALQGLGVIKVE 4187
Query: 266 ASGKDRPLLVRQGSVNSSGK-----------------------AGRSYVKEIACGGRHSA 302
+ L + G+V + GK G+ V IACG H
Sbjct: 4188 CGSQFSVALTKSGAVYTWGKGDYHRLGHGTEDHIRRPRRCTTLQGKKIVS-IACGSLHCV 4246
Query: 303 VVTDAGALLTFGWGLYGQ------------RMAKCLAGDGIN 332
TDAG + T+G GQ R+ L G IN
Sbjct: 4247 ACTDAGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKIN 4288
>gi|282722852|gb|ADA84472.1| retinitis pigmentosa GTPase regulator protein 2 ORF15 [Danio rerio]
Length = 1413
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 26/118 (22%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P VT P ++ +VA GG HT+ L++ +V+ +G G GQLG G+ I P ++
Sbjct: 236 PQQVTDIPD-RVVQVACGGGHTVALTE-NEVYSFGLGQFGQLGHGTFIFESRLPRVV--- 290
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
EH G+ VK ACG H+A++TD G L TFG G +G+
Sbjct: 291 EHFRKGR---------------------VKHAACGENHTALITDNGLLYTFGDGRHGK 327
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 59/145 (40%), Gaps = 36/145 (24%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI-------PCLEH 264
VK+T A G HTL+ + G ++ G EGQLGLG + HL+ P
Sbjct: 90 VKLT--ACGRTHTLVFTSRGNLYACGGNNEGQLGLGD-CNDRTSFHLVEFFNKQGPIKML 146
Query: 265 AASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IACGGRHSAVV 304
AA L + G + NS G+ G ++CG HSA V
Sbjct: 147 AAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSVGKRVFWVSCGYYHSAFV 206
Query: 305 TDAGALLTFG------WGLYGQRMA 323
T GAL TFG GL +++A
Sbjct: 207 TVDGALYTFGEKDSGKLGLSTEKLA 231
>gi|297673959|ref|XP_002815008.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 3
[Pongo abelii]
Length = 932
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 65/147 (44%), Gaps = 33/147 (22%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAAS 267
I +V+ G H L L+ GQ + WG GQLGLG +P IP + AA
Sbjct: 21 ILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAG 80
Query: 268 GKDRPLLVRQGSV-----NSSGKAGRSYVKE-----------------IACGGRHSAVVT 305
G L G+V N++G+ G S K+ I+CG H+AV+T
Sbjct: 81 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 140
Query: 306 DAGALLTFGWGLYGQRMAKCLAGDGIN 332
+G + TFG G YGQ L D +N
Sbjct: 141 KSGGVFTFGAGSYGQ-----LGHDSMN 162
>gi|255081710|ref|XP_002508077.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
gi|226523353|gb|ACO69335.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
Length = 1348
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 107/277 (38%), Gaps = 78/277 (28%)
Query: 53 KDV--CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET---PEPFPLPTEA--S 105
+DV GG ++A + +G++ +G EG++ + E P T A
Sbjct: 208 RDVTHVAGGARHSVAVTSAGEVYAFGDCSGEGKALSAPTRLREAVIDPPEVTATTNAMPR 267
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
V A G HC +VT +G + +WG E FG G Q
Sbjct: 268 VATVACGQRHCAAVTTSGVLLSWGNEE----------FGQLG----------------QG 301
Query: 166 PPSD---KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
PP D K + +++RR +S + P LV + VK T VA G
Sbjct: 302 PPRDSSSKGDAKSLIRRRADAS----------------MMPRLVG-SGHVKFTSVACGAG 344
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
HTL L+ G+V+ +G G G LG G R+ P L+ L
Sbjct: 345 HTLALTANGRVFSFGRGAFGALGHGDRLN-CDVPRLVDALWGVG---------------- 387
Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
V +IA G HSA ++ +G + T+G G YG
Sbjct: 388 --------VAQIAAGDNHSASLSASGRVYTWGRGKYG 416
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 21/120 (17%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY-GGEGQLGLGSRIKMVPTPHLIP 260
+P V+ G +T VA G RH++ ++ G+V+ +G GEG K + P +
Sbjct: 198 TPRSVSSLDGRDVTHVAGGARHSVAVTSAGEVYAFGDCSGEG--------KALSAPTRL- 248
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
R ++ V ++ A V +ACG RH A VT +G LL++G +GQ
Sbjct: 249 ----------REAVIDPPEVTATTNA-MPRVATVACGQRHCAAVTTSGVLLSWGNEEFGQ 297
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 46/104 (44%), Gaps = 15/104 (14%)
Query: 47 CGGDSWKDVCGGGCGFALA--TSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA 104
CGGD + GGG G LA SG T +AD + + G+
Sbjct: 447 CGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATADVLTPTIIDRALLGDE---------- 496
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS 148
V + +AG H V+VTE G VYTWG R ++ + G AG+
Sbjct: 497 KVFQISAGSKHSVAVTEGGCVYTWGART---QGQLGHELGDAGT 537
>gi|182416055|ref|YP_001821121.1| cell surface receptor IPT/TIG domain-containing protein [Opitutus
terrae PB90-1]
gi|177843269|gb|ACB77521.1| cell surface receptor IPT/TIG domain protein [Opitutus terrae
PB90-1]
Length = 1848
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 128/344 (37%), Gaps = 77/344 (22%)
Query: 12 EKMEECKETVVYMWGYLP---------GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
+ + VY WGY G S + S + P+ + G + K + G+
Sbjct: 183 HSLALASDGTVYAWGYNANGQLGNGSGGLSTDISKV--PVAVDMTGVLAGKTIIAIATGY 240
Query: 63 --ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP-----TEASVVKAAAGWAH 115
+LA + G + WG + EGQ L G ++ P + T +VV AAG H
Sbjct: 241 EHSLALASDGIVYAWGD-NSEGQ--LGDGSTTDSKVPMAVDRTGVLTGKTVVAIAAGRNH 297
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD--KRAG 173
++V G VY WG + G D + S++P P D + AG
Sbjct: 298 SLAVASDGTVYAWGDNY----------YAQLG----DGSLTDSSVPV----PVDLTELAG 339
Query: 174 EEVVK-----RRKTSSARE-------ESENPASGDEFFTLSPCLVTLN-----PGVKITK 216
+ V R + A + ++ N GD L P V++ G I
Sbjct: 340 KSVADVAGGDRHSLAQASDGTVYAWGDNTNGQMGDTIAHLKPAPVSVTGGSALAGKTIVA 399
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
VAAGG H L L+ G V WGY GQLG S A P+
Sbjct: 400 VAAGGYHNLALASDGTVCTWGYNYNGQLGNNS--------------SGAGEKSTVPI--- 442
Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+VNS G + + G HS + GAL T+G+ GQ
Sbjct: 443 --AVNSYGALPGKTIVAVGAGVSHSLALASDGALCTWGFNSQGQ 484
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 89/251 (35%), Gaps = 74/251 (29%)
Query: 10 ENEKMEECKETVVYMWG-----YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFAL 64
N + + VY WG L S S + P+ G S DV GG +L
Sbjct: 295 RNHSLAVASDGTVYAWGDNYYAQLGDGSLTDSSVPVPVDLTELAGKSVADVAGGDR-HSL 353
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETP---EPFPLPTEA-------SVVKAAAGWA 114
A + G + WG T+G+ G+T +P P+ ++V AAG
Sbjct: 354 AQASDGTVYAWGDN--------TNGQMGDTIAHLKPAPVSVTGGSALAGKTIVAVAAGGY 405
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H +++ G V TWG+ G +S+G
Sbjct: 406 HNLALASDGTVCTWGYNYN-------------GQLGNNSSG------------------- 433
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
A E+S P + + + L PG I V AG H+L L+ G +
Sbjct: 434 ----------AGEKSTVPIAVNSYGAL--------PGKTIVAVGAGVSHSLALASDGALC 475
Query: 235 GWGYGGEGQLG 245
WG+ +GQLG
Sbjct: 476 TWGFNSQGQLG 486
>gi|297305171|ref|XP_001103994.2| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like,
partial [Macaca mulatta]
Length = 744
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 26/119 (21%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P LV+ P K+ +VA GG HT++L++ V+ +G G GQLGLG+ + P +I
Sbjct: 69 TPQLVSEIPE-KVIQVACGGEHTVVLTE-NAVYTFGLGQFGQLGLGTFLFETSEPKVIEN 126
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+R ++ SY I+CG H+A++TD G + TFG G +G+
Sbjct: 127 -------------IRDHTI--------SY---ISCGENHTALITDIGLMYTFGDGRHGK 161
>gi|315040529|ref|XP_003169642.1| RNA transporter 2 [Arthroderma gypseum CBS 118893]
gi|311346332|gb|EFR05535.1| RNA transporter 2 [Arthroderma gypseum CBS 118893]
Length = 565
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 96/245 (39%), Gaps = 59/245 (24%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
+ VV+ AAG HCV++T G+V TWG + G+ +D+T +
Sbjct: 182 DVGVVQVAAGGMHCVALTHDGKVLTWGVND-------------QGALGRDTTWEGGLKDI 228
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
+ A K + E + D F + I +VAAG
Sbjct: 229 DDA----KSDCSSDSGSDSGLNPHESTPTALPSDAFPEETI----------IVQVAAGDS 274
Query: 223 HTLILSDMGQVWGWG--YGGEGQLGLGSRIKMVPTPHLIPCLE---HAASGKDRPLLV-R 276
+ L+D G V+GWG G EG LG + K+ TP LIP L+ H A G + L +
Sbjct: 275 SSFALTDDGLVYGWGTFRGNEGILGFDAETKVQATPKLIPGLKKITHIACGDNHALAIDS 334
Query: 277 QGSV-----NSSGKAGRSYVK-------------------EIACGGRHSAVVTDAGALLT 312
+G+V + GR V+ + CG HS V +G +
Sbjct: 335 RGAVFAWGSGQQNQLGRRIVERNKLNGLQPREFGLPKNIVHVGCGSFHSFAVHKSGKV-- 392
Query: 313 FGWGL 317
+GWGL
Sbjct: 393 YGWGL 397
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 97/267 (36%), Gaps = 61/267 (22%)
Query: 21 VVYMWGYLPG----------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSE 68
+VY WG G T + +P L P K + CG ALA
Sbjct: 284 LVYGWGTFRGNEGILGFDAETKVQATPKLIP---------GLKKITHIACGDNHALAIDS 334
Query: 69 SGKLITWGSADDE--GQSYLTSGK-HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEV 125
G + WGS G+ + K +G P F LP ++V G H +V ++G+V
Sbjct: 335 RGAVFAWGSGQQNQLGRRIVERNKLNGLQPREFGLPK--NIVHVGCGSFHSFAVHKSGKV 392
Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL--PTEQAPPSDKRAGEEVVKRRKTS 183
Y WG + Q+ + ++ + PT +DK + T
Sbjct: 393 YGWGLNSYCETG-----------IQQGAGDDEAVILHPTVIDSLNDKSIVQICGGSHHTI 441
Query: 184 SAREESENPA--------SGDEFFTLSPCLV--------------TLNPGVKITKVAAGG 221
+ + E A SG + TLS V T PG K VAAG
Sbjct: 442 ARTADGECLAWGRIDGFQSGLKVDTLSDSAVIKDDRDRPRVLFEPTAVPGFKADYVAAGA 501
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGS 248
H++ + + G+ W WG+ Q G G+
Sbjct: 502 DHSIAIDNEGRAWTWGFSANYQTGQGT 528
>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
anatinus]
Length = 3053
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 25/112 (22%)
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
N VK V +GGRH + L+ G+V+ WG G +G+LG SR+
Sbjct: 1234 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNC---------------- 1277
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
D+P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 1278 -DKPRLIE------ALKTKR--IRDIACGSSHSAAITSSGELYTWGLGEYGR 1320
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL P LV I KVAA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 186 TLGPQLVQGLASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPL-EEPK 244
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I L SGK +V IACG +SA +T G L T+G G
Sbjct: 245 MISAL--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 284
Query: 318 YGQ 320
YG+
Sbjct: 285 YGR 287
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 56/110 (50%), Gaps = 27/110 (24%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L LS G+V+ WG +G+LG G+R PC DR
Sbjct: 2258 VKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------SPC--------DR 2300
Query: 272 PLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P +V ++ R V +IA GG HSA +T AG L ++G G YG+
Sbjct: 2301 PRVV---------ESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGR 2341
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
D+ CG F++A ++ G++ +WG D++ + T +H P+ VV AA
Sbjct: 363 DIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVVDVAA 421
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 422 GSTHCLALTEDSEVHSWG 439
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 2424 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 2482
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 2483 CTEDGEVYTWG 2493
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 110/282 (39%), Gaps = 61/282 (21%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
GG A + GK+ G A T+G+ G + PLP + + VVK
Sbjct: 1188 AGGSKSLFAVTVEGKVYACGEA--------TNGRLGLGISSGTVPLPRQITALSNYVVKK 1239
Query: 110 AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
A G H +++T G+V++WG D G G F + + K + +
Sbjct: 1240 VAVHSGGRHAMALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 1289
Query: 167 PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
A TSS E GD L P +V + G ++ +VA G
Sbjct: 1290 RIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 1349
Query: 221 GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
R TL L+D G V+ WG G G+LG G + G + P + +
Sbjct: 1350 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNVPQNIER- 1391
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+N G V +I CG + S +T +G + T+G G +G+
Sbjct: 1392 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGRGDFGE 1426
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 89/233 (38%), Gaps = 46/233 (19%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
P+P ++ ++ K G A+A + GK+ +WG DD G+ S + + P
Sbjct: 1224 PLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 1282
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 1283 IEALKTKRIRDIACGSSHSAAITSSGELYTWGLGE----------YGRLG--HGDNT--- 1327
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 1328 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 1380
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
P + G + ++ G + +L L+ G VW WG G G+L S I
Sbjct: 1381 EGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGRGDFGELRPDSHI 1433
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 93/236 (39%), Gaps = 38/236 (16%)
Query: 46 LCGGDSWKDVCGGGCG--FALATSESGKLITWG----------SADDEGQSYLTSGKHGE 93
L G + K V CG ++ A + G+L TWG S++D+ L +G G
Sbjct: 249 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKG- 307
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
+ V +G A ++VTE G+V++WG D+G G D
Sbjct: 308 --------LKVIDVSCGSGDAQTLAVTENGQVWSWG----------DGDYGKLGRGGSDG 349
Query: 154 TGKQSALPTEQAPPSDK-RAGEE----VVKRRKTSS-AREESENPASGDEFFTLSPCLVT 207
+ Q K R G + + K + S + +++ G E P L+
Sbjct: 350 CKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 409
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G K+ VAAG H L L++ +V WG + Q RI P P +P L+
Sbjct: 410 GLQGKKVVDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITK-PQPSALPGLD 464
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
P LVT G+K+ V+ +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 299 PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 357
Query: 261 CLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 358 KLQDLDIVKVRCGSQFSIALTKDGQVYSWGK 388
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 62/151 (41%), Gaps = 35/151 (23%)
Query: 202 SPC----LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
SPC +V G+++ +AAGG H+ ++ G ++ WG G G+LG G + P
Sbjct: 2296 SPCDRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGRLGHGDSEDQL-KPK 2354
Query: 258 LIPCLE-------HAASGKDRPLLVRQGSV------NSSGKAGRS--------------- 289
L+ L+ SG + L + GK GR
Sbjct: 2355 LVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLT 2414
Query: 290 --YVKEIACGGRHSAVVTDAGALLTFGWGLY 318
V ++ CG + S +T +GA+ T+G G Y
Sbjct: 2415 GLGVVKVECGSQFSVALTKSGAVYTWGKGDY 2445
>gi|156361074|ref|XP_001625345.1| predicted protein [Nematostella vectensis]
gi|156212175|gb|EDO33245.1| predicted protein [Nematostella vectensis]
Length = 440
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 107/278 (38%), Gaps = 49/278 (17%)
Query: 64 LATSESGKLITWGSADD--EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
+A S+ GK+ TWG DD G+ + G+ P +P + ++V +AG +H ++++
Sbjct: 92 VALSKDGKVYTWGCNDDGALGRETTSEGEEEFQPGVVSMPDDVNIVMVSAGDSHTAALSD 151
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA--LPTEQ------APPSDKRAG 173
G VY WG RD Q D K+ A L +E A +D A
Sbjct: 152 QGTVYAWG---------TYRDASGQIGLQPDGVKKKPAVILTSESDRIIKIASGNDHTAA 202
Query: 174 EEVVKRRKTSSAREESENPASGDEF----------FTLSPCLVTLNPGVKITKVAAGGRH 223
T E+ + + F + L P LV G+K V G
Sbjct: 203 LTTSGNLFTLGCAEQGQLGRVKECFSARGGRRGLAYILEPALVRSKKGLKFKDVFCGSFA 262
Query: 224 TLILSDMG-QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
T +++ G V+ WG GQLG G V T H P+ V+ S++
Sbjct: 263 TFVVAKTGSDVYAWGLNNYGQLGTGD----VQTWHF-------------PVKVK--SLSQ 303
Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
K+ + IA G H+ V G + G YG+
Sbjct: 304 LNKSEKDKHITIANGQHHTIVCDPNGKVYALGRADYGR 341
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 104/280 (37%), Gaps = 86/280 (30%)
Query: 68 ESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE-ASVVKAAAGWAHCVSVTEAGEVY 126
ESG+ +T G D GQ L P+ E +V+ +G H V++++ G+VY
Sbjct: 43 ESGQALTLGQGD-VGQLGLGPDTLERKKPAVPIDLEGVPIVQVESGGMHTVALSKDGKVY 101
Query: 127 TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR 186
TWG D G+ G R+T+S
Sbjct: 102 TWG----------CNDDGALG--------------------------------RETTSEG 119
Query: 187 EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG--YGGEGQL 244
EE EF P +V++ V I V+AG HT LSD G V+ WG GQ+
Sbjct: 120 EE--------EF---QPGVVSMPDDVNIVMVSAGDSHTAALSDQGTVYAWGTYRDASGQI 168
Query: 245 GLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
GL +K P L S DR + +IA G H+A
Sbjct: 169 GLQPDGVKKKPAVIL-------TSESDR-------------------IIKIASGNDHTAA 202
Query: 304 VTDAGALLTFGWGLYGQ--RMAKCLAGDGINMGSWVWVTP 341
+T +G L T G GQ R+ +C + G G + P
Sbjct: 203 LTTSGNLFTLGCAEQGQLGRVKECFSARGGRRGLAYILEP 242
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 98/268 (36%), Gaps = 41/268 (15%)
Query: 65 ATSESGKLITWGSADD-EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
A S+ G + WG+ D GQ L + P ++K A+G H ++T +G
Sbjct: 148 ALSDQGTVYAWGTYRDASGQIGLQPDGVKKKPAVILTSESDRIIKIASGNDHTAALTTSG 207
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA-----GEEVVK 178
++T G E +V F + G + + + AL + K VV
Sbjct: 208 NLFTLGCAEQGQLGRVKECFSARGGRRGLAYILEPALVRSKKGLKFKDVFCGSFATFVVA 267
Query: 179 RRKTSS---AREESENPASGD----EFFTLSPCLVTLNPGVK---ITKVAAGGRHTLILS 228
+ + +GD F L LN K IT +A G HT++
Sbjct: 268 KTGSDVYAWGLNNYGQLGTGDVQTWHFPVKVKSLSQLNKSEKDKHIT-IANGQHHTIVCD 326
Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
G+V+ G G+LGLG K P I L++
Sbjct: 327 PNGKVYALGRADYGRLGLGDGAKETALPAHITSLDN------------------------ 362
Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWG 316
++++ACG S V+D G L ++G G
Sbjct: 363 EVIEKVACGECVSFAVSDKGELYSWGMG 390
>gi|77403863|tpg|DAA05713.1| TPA_exp: RPGR ORF15 isoform [Homo sapiens]
Length = 1152
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 26/119 (21%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P LV+ P K+ +VA GG HT++L++ V+ +G G GQLGLG+ + P +I
Sbjct: 234 TPQLVSEIP-EKVIQVACGGEHTVVLTE-NAVYTFGLGQFGQLGLGTFLFETSEPKVIEN 291
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +D+ + SY I+CG H+A++TD G + TFG G +G+
Sbjct: 292 I------RDQTI---------------SY---ISCGENHTALITDIGLMYTFGDGRHGK 326
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 54/139 (38%), Gaps = 31/139 (22%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
C+ L P K+ A G HTL+ ++ G V+ G EGQLGLG I +
Sbjct: 80 CVKALKP-EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
H I L +A L G + NS G+ G V I+
Sbjct: 139 EHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWIS 196
Query: 296 CGGRHSAVVTDAGALLTFG 314
CG HSA VT G L FG
Sbjct: 197 CGYYHSAFVTTDGELYVFG 215
>gi|47221092|emb|CAG12786.1| unnamed protein product [Tetraodon nigroviridis]
Length = 527
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 33/225 (14%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG--KHGETPEPFPLPTE 103
LCG G G A+AT++ G++ +WG G S L +G HG TP
Sbjct: 71 LCGKKIVSLSYGTGPHVAIATAD-GEVFSWGH---NGYSQLGNGTTNHGLTPALVSTNLL 126
Query: 104 AS-VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
V++ A G H +++T GEV+ WG+ ++G ST Q P
Sbjct: 127 GKRVIEVACGSHHTIALTTDGEVFAWGYN-------------NSGQVGSGSTANQPT-PR 172
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESE-----------NPASGDEFFTLSPCLVTLNPG 211
+ +A + + S A +S G+ +PC + G
Sbjct: 173 RVSSCLQNKAVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQG 232
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPT 255
V + +VA G HTL L+D G V+ WG GQLG G++ + +PT
Sbjct: 233 VSVIQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKCNQALPT 277
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 27/122 (22%)
Query: 201 LSPCLVTLNP-GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L+P LV+ N G ++ +VA G HT+ L+ G+V+ WGY GQ+G GS PTP +
Sbjct: 116 LTPALVSTNLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQ-PTPRRV 174
Query: 260 -PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
CL++ A V IACG S V D+G + +G+
Sbjct: 175 SSCLQNKA------------------------VVNIACGQLCSMAVLDSGEIYGWGYNCN 210
Query: 319 GQ 320
GQ
Sbjct: 211 GQ 212
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 74/173 (42%), Gaps = 22/173 (12%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P R+ K V CG ++A +SG++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKAVVNIACGQLCSMAVLDSGEIYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ L + + +TP SV++ A G+AH +++T+ G VY WG
Sbjct: 208 NCNGQLGLGNNGNQQTPCRIAALQGVSVIQVACGYAHTLALTDEGFVYAWG--------- 258
Query: 139 VTRDFGSAGSFQKDSTGKQ--SALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
A S+ + TG + ALPT ++ A TS+A+ +S
Sbjct: 259 -------ANSYGQLGTGNKCNQALPTLINTDKERMAEVAACHTSHTSAAKTQS 304
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 56/127 (44%), Gaps = 25/127 (19%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H I + G+V+ WG+ G QLG G+
Sbjct: 57 GDLQSTIEPRRIDALCGKKIVSLSYGTGPHVAIATADGEVFSWGHNGYSQLGNGT----- 111
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
T H + P LV S N GK V E+ACG H+ +T G + +
Sbjct: 112 -TNHGLT-----------PALV---STNLLGKR----VIEVACGSHHTIALTTDGEVFAW 152
Query: 314 GWGLYGQ 320
G+ GQ
Sbjct: 153 GYNNSGQ 159
>gi|78190492|ref|NP_001030025.1| X-linked retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 26/119 (21%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P LV+ P K+ +VA GG HT++L++ V+ +G G GQLGLG+ + P +I
Sbjct: 234 TPQLVSEIP-EKVIQVACGGEHTVVLTE-NAVYTFGLGQFGQLGLGTFLFETSEPKVIEN 291
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +D+ + SY I+CG H+A++TD G + TFG G +G+
Sbjct: 292 I------RDQTI---------------SY---ISCGENHTALITDIGLMYTFGDGRHGK 326
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 54/139 (38%), Gaps = 31/139 (22%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
C+ L P K+ A G HTL+ ++ G V+ G EGQLGLG I +
Sbjct: 80 CVKALKP-EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
H I L +A L G + NS G+ G V I+
Sbjct: 139 EHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWIS 196
Query: 296 CGGRHSAVVTDAGALLTFG 314
CG HSA VT G L FG
Sbjct: 197 CGYYHSAFVTTDGELYVFG 215
>gi|296819631|ref|XP_002849878.1| RNA transport protein 2 [Arthroderma otae CBS 113480]
gi|238840331|gb|EEQ29993.1| RNA transport protein 2 [Arthroderma otae CBS 113480]
Length = 565
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 95/245 (38%), Gaps = 60/245 (24%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
+ VV+ AAG HCV++T G+V TWG + + RD G +
Sbjct: 183 DVGVVQVAAGGMHCVALTHDGKVLTWGVND---QGALGRDTAWEGGLKD----------- 228
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
D ++ T ES A + F G I +VAAG
Sbjct: 229 -----IDAKSDCSSDSGSDTGLNPHESTPTAIPSDAFP---------EGTVIVQVAAGDS 274
Query: 223 HTLILSDMGQVWGWG--YGGEGQLGLGSRIKMVPTPHLIPCLE---HAASGKDRPL-LVR 276
+ L+D G V+GWG G EG +G + K+ TP LIP L+ H A G + L L
Sbjct: 275 SSFALTDDGLVYGWGTFRGNEGIIGFDADTKIQATPKLIPGLKKITHLACGDNHTLALDS 334
Query: 277 QGSV-----NSSGKAGRSYVK-------------------EIACGGRHSAVVTDAGALLT 312
+G+V + GR V+ + CG HS V +G +
Sbjct: 335 RGAVFAWGSGQQNQLGRRIVERNKLNGLQPREFGLPKNIVHVGCGSFHSFAVHKSGKV-- 392
Query: 313 FGWGL 317
+GWGL
Sbjct: 393 YGWGL 397
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 94/280 (33%), Gaps = 87/280 (31%)
Query: 21 VVYMWGYLPGT--------------SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
+VY WG G +P+ P L I CG + LA
Sbjct: 284 LVYGWGTFRGNEGIIGFDADTKIQATPKLIPGLKKITHLACGDN-----------HTLAL 332
Query: 67 SESGKLITWGSADDE--GQSYLTSGK-HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
G + WGS G+ + K +G P F LP ++V G H +V ++G
Sbjct: 333 DSRGAVFAWGSGQQNQLGRRIVERNKLNGLQPREFGLPK--NIVHVGCGSFHSFAVHKSG 390
Query: 124 EVYTWGWR------------------------ECVPSAKVTRDFG-SAGSFQKDSTGK-- 156
+VY WG + + +T+ G S S + + G+
Sbjct: 391 KVYGWGLNSYCETGIQQGAGDDEAVVLHPTVIDSLKDKNITQICGGSHHSLARTAEGECL 450
Query: 157 --------QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTL 208
QS L E P S V + + AR P V
Sbjct: 451 VWGRLDGFQSGLKVENLPDS-------AVIKDDRNRAR------------VLFQPTAV-- 489
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
PG K VAAG H++ + + G+ W WG+ Q G G+
Sbjct: 490 -PGFKAEYVAAGADHSIAIDNDGRAWTWGFSANYQTGQGT 528
>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
Length = 1057
Score = 58.2 bits (139), Expect = 6e-06, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G E T P L+ + +++ G RH+L LS+ GQV WG GQLG + ++V
Sbjct: 73 GHELPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDNDCGQLGHATDKEIVQ 132
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
P ++ R L+ + V +IACG HS +T G L ++G
Sbjct: 133 LPKVV-----------RQLVSKT-------------VVQIACGNNHSLALTSCGELYSWG 168
Query: 315 WGLYGQ 320
+YGQ
Sbjct: 169 SNIYGQ 174
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 75/293 (25%), Positives = 116/293 (39%), Gaps = 50/293 (17%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA SE G++++WG D + T + + P+ +VV+ A G H ++
Sbjct: 98 GSRHSLALSEWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLA 157
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDST--GKQSALPTEQAPPSDKRA--G 173
+T GE+Y+WG + +G G + KD T L T P A G
Sbjct: 158 LTSCGELYSWG----------SNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGG 207
Query: 174 EEVVKRRKTSS----AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
K+ + R DE P + + + VA G ++ L++
Sbjct: 208 NHSFLISKSGAVFGWGRNNCGQLGLNDEANRAYPTQLKTLRTLGVRFVACGDEFSVFLTN 267
Query: 230 MGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
G V+ G G GQLG G S +M+P R ++ GS
Sbjct: 268 EGGVFTCGAGAYGQLGHGFSSNEMLP----------------RMVMELMGST-------- 303
Query: 289 SYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQ---RMAKCLAGDGINMGSWV 337
+ ++ACG RH+ A+V G + FG G GQ R K L + +G WV
Sbjct: 304 --ITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIGPWV 354
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 77/298 (25%), Positives = 115/298 (38%), Gaps = 65/298 (21%)
Query: 69 SGK-LITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
SGK L WGS GQ L G E TP P + +V + A G H + +T G+
Sbjct: 3 SGKELYCWGSTS-HGQLGL-GGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGK 60
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
VY G + D G + T + +P Q D + R + +
Sbjct: 61 VYACG----------SNDHSQLG--HELPTKRPLLIPELQ----DYVVIQISCGSRHSLA 104
Query: 185 AREESENPASGD------------EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
E + + GD E L P +V + ++A G H+L L+ G+
Sbjct: 105 LSEWGQVLSWGDNDCGQLGHATDKEIVQL-PKVVRQLVSKTVVQIACGNNHSLALTSCGE 163
Query: 233 VWGWGYGGEGQLGLGSRIKM--------VPTPHLIPCLEHAASGKDRPLLVRQGSV---- 280
++ WG GQLG+ S + + T IP A G L+ + G+V
Sbjct: 164 LYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWG 223
Query: 281 -NSSGKAG------RSY-----------VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
N+ G+ G R+Y V+ +ACG S +T+ G + T G G YGQ
Sbjct: 224 RNNCGQLGLNDEANRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281
Score = 44.7 bits (104), Expect = 0.059, Method: Composition-based stats.
Identities = 75/287 (26%), Positives = 107/287 (37%), Gaps = 76/287 (26%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVV 107
K V CG +LA + G+L +WGS + GQ + S K H P +
Sbjct: 143 KTVVQIACGNNHSLALTSCGELYSWGS-NIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLA 201
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
A G H ++++G V+ WG C G G D + A PT+
Sbjct: 202 AIACGGNHSFLISKSGAVFGWGRNNC----------GQLG--LNDEANR--AYPTQ---- 243
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEF----------FT----------------- 200
+K +T R A GDEF FT
Sbjct: 244 ---------LKTLRTLGVR----FVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNE 290
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLIL-SDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHL 258
+ P +V G IT+VA G RHTL L G+V+ +G G GQLG S + M+P +
Sbjct: 291 MLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVI 350
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P + + S L++ S +++I GG S V T
Sbjct: 351 GPWVSPSGSA-----LLQSNDAKVS-----VVIRQIFSGGDQSIVTT 387
>gi|348528302|ref|XP_003451657.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Oreochromis
niloticus]
Length = 531
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 71/150 (47%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNP-GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
++P LV+ N K+T+VA G H++ L+D G+V+ WGY GQ+G GS PTP +
Sbjct: 116 VAPVLVSANLLNKKVTEVACGSHHSMALTDTGEVYAWGYNNCGQVGSGSTANQ-PTPRRV 174
Query: 260 -PCLEHAAS-----GKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
CL++ + G+ L +V G V N +G+ G
Sbjct: 175 SSCLQNKVAVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQVTPCRLVGLQGLC 234
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V++I G HS +TD G L +G YGQ
Sbjct: 235 VQQIVSGYAHSMALTDEGLLYAWGANTYGQ 264
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 29/199 (14%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVT 120
L +E G+L WG G S L +G + P + V + A G H +++T
Sbjct: 88 LLATEDGELFAWGH---NGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALT 144
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
+ GEVY WG+ C G GS ST Q + +K A V +
Sbjct: 145 DTGEVYAWGYNNC----------GQVGS---GSTANQPTPRRVSSCLQNKVAVSIVCGQT 191
Query: 181 KTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
+ + + E G+ ++PC + G+ + ++ +G H++ L+D
Sbjct: 192 SSLAVVDNGEVYGWGYNGNGQLGLGNNGNQVTPCRLVGLQGLCVQQIVSGYAHSMALTDE 251
Query: 231 GQVWGWGYGGEGQLGLGSR 249
G ++ WG GQLG G++
Sbjct: 252 GLLYAWGANTYGQLGTGNK 270
>gi|449481391|ref|XP_004156169.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Cucumis sativus]
Length = 472
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 93/239 (38%), Gaps = 43/239 (17%)
Query: 95 PEPFPLPTEASV--VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
P+ F P E + + A G H +V G ++TWG DFG G D
Sbjct: 49 PDLFGCPGEINSRWLDIACGREHTAAVASDGSLFTWG----------ANDFGQLG----D 94
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS---------GDEFFTLSP 203
T ++S LP + + T++ E EN + G + P
Sbjct: 95 GTEEKSKLPKKVNQLQGEFVKSVSCGAHCTAAIAEPRENDGTLSTRRLWIWGQNQGSNFP 154
Query: 204 CLV--TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
L P I +V+ G H + LSD GQ+ WGY GQLG G + + +I
Sbjct: 155 RLFWGAFTPQTIIRQVSCGAVHVVALSDDGQLQAWGYNEYGQLGRGVTSEGLQGARIINA 214
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
A + P LV + +++CG HSA +++ G + T+G G GQ
Sbjct: 215 F--AKFLDEAPELVT--------------ITKVSCGEYHSAAISENGEVYTWGLGSMGQ 257
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 121/326 (37%), Gaps = 70/326 (21%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALA-------TSESGKLITWG 76
+G L + EKS + P G+ K V CG C A+A T + +L WG
Sbjct: 89 FGQLGDGTEEKSKL--PKKVNQLQGEFVKSVSCGAHCTAAIAEPRENDGTLSTRRLWIWG 146
Query: 77 SADDEGQSYLTSGKHGETPEPF--PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
++G ++ P F + + + + G H V++++ G++ WG+ E
Sbjct: 147 Q--NQGSNF---------PRLFWGAFTPQTIIRQVSCGAVHVVALSDDGQLQAWGYNE-- 193
Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS 194
++ R S G Q A ++AP E+V K S S +
Sbjct: 194 -YGQLGRGVTSEG-LQGARIINAFAKFLDEAP--------ELVTITKVSCGEYHSAAISE 243
Query: 195 GDEFFT--------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
E +T L P V G+ + +A GG HT ++ G ++
Sbjct: 244 NGEVYTWGLGSMGQLGHCSLQSADKELIPRRVVALDGICVKDIACGGVHTCAITQNGSLY 303
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
W G ++ + P C+ + R L V V S G V+ +
Sbjct: 304 AW------GGGQVGQLGVGPQTGFFSCIAGDSETFLRNLPV---VVVSDG------VQHV 348
Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQ 320
ACG H+ V T G + +G+ YGQ
Sbjct: 349 ACGHSHTLVSTKDGRIHGWGYNSYGQ 374
>gi|145594878|ref|YP_001159175.1| cell wall anchor domain-containing protein [Salinispora tropica
CNB-440]
gi|145304215|gb|ABP54797.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
Length = 551
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 88/217 (40%), Gaps = 24/217 (11%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P+P RL G + + G +LA + G ++ WG + GQ + TP P
Sbjct: 78 TPVPVRLPVGTTVTAIAGSDT-HSLALTSVGTVLAWG-GNSFGQLGDGTTASSRTPVPVR 135
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
LP +V AAG +H +++T G V+ WG G G D T S+
Sbjct: 136 LPVGTTVTAIAAGTSHSLAITATGAVFAWGDNA----------VGQLG----DGTTTDSS 181
Query: 160 LPTEQAPPSDKRA-------GEEV-VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
LP P G + V + A + GD T S +T+
Sbjct: 182 LPVPVRLPVGTTVTAIAGGLGHSLAVASTGATLAWGSNAFGQLGDGTTTGSSTPITVPQL 241
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
+T VAAG H+L L+ G V+ WG GQLG GS
Sbjct: 242 PTVTAVAAGDVHSLALTSTGTVYAWGANSFGQLGDGS 278
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 84/218 (38%), Gaps = 28/218 (12%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
P+P RL G + + GG G +LA + +G + WGS + GQ L G + P +
Sbjct: 183 PVPVRLPVGTTVTAIAGG-LGHSLAVASTGATLAWGS-NAFGQ--LGDGTTTGSSTPITV 238
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
P +V AAG H +++T G VY WG FG G D + S+
Sbjct: 239 PQLPTVTAVAAGDVHSLALTSTGTVYAWGANS----------FGQLG----DGSTSDSST 284
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE----------FFTLSPCLVTLNP 210
P P+ A V + + A GD + +P V +
Sbjct: 285 PIAVRVPAGTTATAVVSGADHSLALTAAGGALAWGDNGQGQLGNGATVGSSTPVAVRVPG 344
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G +T VA H + ++ W EGQLG G+
Sbjct: 345 GATLTAVAIHRDHAVAVTSTATALAWSRNNEGQLGNGT 382
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 55/140 (39%), Gaps = 33/140 (23%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIP 260
+P V L G +T +AAG H+L ++ G V+ WG GQLG G+ +P P +P
Sbjct: 130 TPVPVRLPVGTTVTAIAAGTSHSLAITATGAVFAWGDNAVGQLGDGTTTDSSLPVPVRLP 189
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ V IA G HS V GA L +G +GQ
Sbjct: 190 V--------------------------GTTVTAIAGGLGHSLAVASTGATLAWGSNAFGQ 223
Query: 321 RMAKCLAGDGINMGSWVWVT 340
GDG GS +T
Sbjct: 224 L------GDGTTTGSSTPIT 237
>gi|428184753|gb|EKX53607.1| hypothetical protein GUITHDRAFT_160884 [Guillardia theta CCMP2712]
Length = 308
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 20/133 (15%)
Query: 188 ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
E NP +G + P +V G+KI K+AAG H L LSD+G+V+ WG+GG G G G
Sbjct: 166 ELGNPNAGSSSY--EPTIVHGLDGIKIVKIAAGQYHVLALSDIGEVYSWGWGGSGTPGAG 223
Query: 248 SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA 307
+ L H P+ R +N + I+CG +HS ++
Sbjct: 224 -----------VGALGHGDKA-SLPVPKRIERLNG------EKITNISCGAKHSVALSQD 265
Query: 308 GALLTFGWGLYGQ 320
G + T+G G G+
Sbjct: 266 GTMFTWGHGEQGR 278
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 88/226 (38%), Gaps = 63/226 (27%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P + PI P+ CG F + +ESGK+ + G + +G
Sbjct: 128 PTEIPIPEPVIDVSCGKK-----------FTVFVTESGKVYSMGDNKNGELGNPNAGSSS 176
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW-RECVPSAKVTRDFGSAGSFQK 151
P +VK AAG H +++++ GEVY+WGW P A V G+ G
Sbjct: 177 YEPTIVHGLDGIKIVKIAAGQYHVLALSDIGEVYSWGWGGSGTPGAGV----GALGH--- 229
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
G +++LP + R E N G
Sbjct: 230 ---GDKASLPVPK---------------------RIERLN-------------------G 246
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV-PTP 256
KIT ++ G +H++ LS G ++ WG+G +G+LG G+ + P P
Sbjct: 247 EKITNISCGAKHSVALSQDGTMFTWGHGEQGRLGHGNNTDFLQPEP 292
>gi|23271234|gb|AAH38104.1| RCBTB1 protein [Homo sapiens]
Length = 355
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 115/321 (35%), Gaps = 89/321 (27%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWG---HNGYSQLGNGTTNQGIATVQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEV+ WG+ C G GS ST Q P K +KR
Sbjct: 144 AADGEVFAWGYNNC----------GQVGS---GSTANQ--------PTPRKVTNCLHIKR 182
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+ +A G ++ + D G+V+GWGY
Sbjct: 183 ----------------------------------VVGIACGQTSSMAVLDNGEVYGWGYN 208
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G GQLGLG+ + TP VR +++S V +I CG
Sbjct: 209 GNGQLGLGNNGNQL-TP------------------VRVAALHS------VCVNQIVCGYA 243
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
H+ +TD G L +G YGQ
Sbjct: 244 HTLALTDEGLLYAWGANTYGQ 264
>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
Length = 4167
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 60/142 (42%), Gaps = 33/142 (23%)
Query: 211 GVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL------ 262
G+ I VAA G H L ++ G V+ WGY GQLGLGS I TP +I L
Sbjct: 554 GIVINMVAAANGCEHMLAVASDGAVYSWGYNDRGQLGLGSTISKSHTPRMIDSLREKYHI 613
Query: 263 -------EHAASGKDRPLLVRQGSVNSSGKAGRSY-----------------VKEIACGG 298
H+A L+ G +N G+ G + + E+ACG
Sbjct: 614 TTAAVSYHHSAVVSSNGELLMFG-MNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGL 672
Query: 299 RHSAVVTDAGALLTFGWGLYGQ 320
H+ +T G + +FG YGQ
Sbjct: 673 YHTIAITSGGEVYSFGKNDYGQ 694
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 98/256 (38%), Gaps = 79/256 (30%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
S +G+L+ +G +D GQ L +H TP+ + + + A G H +++T GE
Sbjct: 625 VVSSNGELLMFG-MNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGE 683
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
VY++G D+G G + +PT +VK +S
Sbjct: 684 VYSFG----------KNDYGQLGL----GHARNMKVPT-------------LVK----TS 712
Query: 185 AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
E E KI V+ G HT+ +S+ G++ WG GQL
Sbjct: 713 LGESDE----------------------KIVAVSCGYYHTVTISEKGKLITWGRNDYGQL 750
Query: 245 GLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
G+GS+ +H S + PL + S +K +CG H+ ++
Sbjct: 751 GIGSK-------------DHKNSAQYVPLPL------------SSKIKTASCGCYHTLIL 785
Query: 305 TDAGALLTFGWGLYGQ 320
G ++ FG GQ
Sbjct: 786 MSNGRVMVFGRNNKGQ 801
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 108/293 (36%), Gaps = 82/293 (27%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYL-TS 88
GT E+ I +P+ A L G GC LA + G + +WG +D GQ L ++
Sbjct: 537 GTFEERVIIATPVRA-LSGIVINMVAAANGCEHMLAVASDGAVYSWG-YNDRGQLGLGST 594
Query: 89 GKHGETPEPFP-LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
TP L + + AA + H V+ GE+ +G +C G
Sbjct: 595 ISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFGMNDC-------------G 641
Query: 148 SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVT 207
D T Q +P LV
Sbjct: 642 QLGLDHTQHQH-------------------------------------------TPQLVD 658
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
IT+VA G HT+ ++ G+V+ +G GQLGLG HA +
Sbjct: 659 SLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLG----------------HARN 702
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
K P LV+ S G++ V ++CG H+ +++ G L+T+G YGQ
Sbjct: 703 MK-VPTLVK----TSLGESDEKIVA-VSCGYYHTVTISEKGKLITWGRNDYGQ 749
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 17/140 (12%)
Query: 41 PIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
P + G+S + + CG+ + SE GKLITWG +D GQ + S H + +
Sbjct: 706 PTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGR-NDYGQLGIGSKDHKNSAQYV 764
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS 158
PLP + + A+ G H + + G V +G + G G+ +
Sbjct: 765 PLPLSSKIKTASCGCYHTLILMSNGRVMVFG----------RNNKGQLGAGSRTLPSADL 814
Query: 159 ALPTEQAPPSDKRAGEEVVK 178
LP PS+ A +EVV+
Sbjct: 815 PLPV----PSNSLANDEVVR 830
>gi|294462324|gb|ADE76711.1| unknown [Picea sitchensis]
Length = 390
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 110/293 (37%), Gaps = 44/293 (15%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA E G+L TWG + K TP +V+AA G HC++V +
Sbjct: 52 SLAICEDGQLFTWGWNQRGTLGHPPESKTESTPTQVKALENVKIVQAAIGGWHCLAVDDQ 111
Query: 123 GEVYTWG---WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR----AGEE 175
G+ Y WG + +C + D + ++D A+P AP R G
Sbjct: 112 GQAYAWGGNEYGQCGEEPERKED--GSKVLRRD-----IAIPQRCAPQLRVRQVAAGGTH 164
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
V + GD +P V V++ +A G H L L + G+VW
Sbjct: 165 SVVLTHNGHVWTWGQPWPPGDIKQISTPVRVQGLENVQL--IAVGAFHNLALLEEGEVWA 222
Query: 236 WGYGGEGQLGLGS---RIKMVPTPHL--IPCLEHAASGKDRPLLVRQGSVNS--SGKAGR 288
WG GQLG G R + VP L + + AA G L V + G+ GR
Sbjct: 223 WGNNEYGQLGTGDTQPRSQPVPVQGLSGLILADIAAGGWHSTALTTDAEVYAWGRGEHGR 282
Query: 289 ---------------------SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +++CGG HS T G + ++G +G+
Sbjct: 283 LGFGDDKSSKMVPQKVHLLAGETIAQVSCGGTHSVARTADGRIFSYGRADHGR 335
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 110/269 (40%), Gaps = 43/269 (15%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
IP R + V GG ++ + +G + TWG G + P +
Sbjct: 145 IPQRCAPQLRVRQVAAGGT-HSVVLTHNGHVWTWGQP-------WPPGDIKQISTPVRVQ 196
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
+V A G H +++ E GEV+ WG ++G G+ D+ + +P
Sbjct: 197 GLENVQLIAVGAFHNLALLEEGEVWAWG----------NNEYGQLGT--GDTQPRSQPVP 244
Query: 162 TEQAP---PSDKRAGEEVVKRRKTSS-----AREESENPASGDEFFT-LSPCLVTLNPGV 212
+ +D AG T + R E GD+ + + P V L G
Sbjct: 245 VQGLSGLILADIAAGGWHSTALTTDAEVYAWGRGEHGRLGFGDDKSSKMVPQKVHLLAGE 304
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
I +V+ GG H++ + G+++ +G G+LG G + V T H + + P
Sbjct: 305 TIAQVSCGGTHSVARTADGRIFSYGRADHGRLGYGRK---VTTGHPM----------EVP 351
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
+ +R N++ +G +VK +ACGGRH+
Sbjct: 352 IGIRPPK-NAAENSGCWFVKLVACGGRHT 379
Score = 38.1 bits (87), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 43/110 (39%), Gaps = 24/110 (21%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G ++ V AG R++L + + GQ++ WG+ G LG K TP + LE+
Sbjct: 39 GKRVVSVVAGSRNSLAICEDGQLFTWGWNQRGTLGHPPESKTESTPTQVKALENVK---- 94
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ + A GG H V D G +G YGQ
Sbjct: 95 --------------------IVQAAIGGWHCLAVDDQGQAYAWGGNEYGQ 124
>gi|255074379|ref|XP_002500864.1| predicted protein [Micromonas sp. RCC299]
gi|226516127|gb|ACO62122.1| predicted protein [Micromonas sp. RCC299]
Length = 265
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 24/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+ + VAAG RH+L LS G V+ WG GQLGLG P P +P + G+D
Sbjct: 32 IDVVAVAAGERHSLALSAKGTVFAWGDNHTGQLGLGGED---PLPMDVPT---TSLGRDV 85
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
++ +A G RHS +V+ G + T GWGLYGQ
Sbjct: 86 VIV------------------GVAAGARHSVMVSATGDVFTVGWGLYGQ 116
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 87/236 (36%), Gaps = 54/236 (22%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-----EASVVKAAAGWAHCV 117
+LA S G + WG + GQ G GE P P +PT + +V AAG H V
Sbjct: 44 SLALSAKGTVFAWGD-NHTGQL----GLGGEDPLPMDVPTTSLGRDVVIVGVAAGARHSV 98
Query: 118 SVTEAGEVYTWGW-----------------RECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
V+ G+V+T GW R A +T +AGS + AL
Sbjct: 99 MVSATGDVFTVGWGLYGQLGHEDAEDLFAPRRVEHLAGITVVSVAAGSAHTACVTRDGAL 158
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
R GE + ARE ++ S VA G
Sbjct: 159 YAW----GSNRKGELGTATGDVTKARESNDGAGS------------------LAVAVACG 196
Query: 221 GRHTLILSDM----GQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDR 271
HT+ L+ + ++G+G+ GQLGLG + + +P +P E K R
Sbjct: 197 SSHTVALARLESGEAGLFGFGWNNMGQLGLGDDKDRGIPARIPLPANEKGKVTKLR 252
>gi|21554872|gb|AAM63715.1| unknown [Arabidopsis thaliana]
Length = 553
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 85/212 (40%), Gaps = 65/212 (30%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
++ AAG AH +++T G VY+WG G F + TGK+S
Sbjct: 18 IISLAAGEAHTIALTGDGCVYSWG----------------RGMFGRLGTGKES------- 54
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
+E+V R E N A G+ ++I VAAG H+L
Sbjct: 55 --------DELVP------VRVEFPNQAEGER--------------IRIIGVAAGAYHSL 86
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-EHAASGKDRPLLVRQGSVNSSG 284
+SD G VW WGY GQLG + P L+ L E AS S+N SG
Sbjct: 87 AVSDDGSVWCWGYNIYGQLGFDGENSLAPC--LVKNLFEQEAS---------SSSLNDSG 135
Query: 285 KAGRSYVK--EIACGGRHSAVVTDAGALLTFG 314
+ RS +K + G S + + G L +G
Sbjct: 136 REARSDLKVGTVKAGSMMSLAIDNVGGLWMWG 167
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 28/134 (20%)
Query: 202 SPCL-VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
SP L ++ + KI +AAG HT+ L+ G V+ WG G G+LG G + L+P
Sbjct: 5 SPTLPISEDLSRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKE-----SDELVP 59
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
VR N + + R + +A G HS V+D G++ +G+ +YGQ
Sbjct: 60 --------------VRVEFPNQA-EGERIRIIGVAAGAYHSLAVSDDGSVWCWGYNIYGQ 104
Query: 321 -------RMAKCLA 327
+A CL
Sbjct: 105 LGFDGENSLAPCLV 118
>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
Length = 1058
Score = 58.2 bits (139), Expect = 6e-06, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G + T P L+ I +++ G RH+L LSD GQV WG GQLG + +++
Sbjct: 73 GHDLPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIMQ 132
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
P ++ R L+ + V +IACG HS +T G L ++G
Sbjct: 133 LPKVV-----------RQLVSKT-------------VVQIACGNNHSLALTSCGELYSWG 168
Query: 315 WGLYGQ 320
+YGQ
Sbjct: 169 SNIYGQ 174
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 74/293 (25%), Positives = 116/293 (39%), Gaps = 50/293 (17%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA S+ G++++WG D + T + + P+ +VV+ A G H ++
Sbjct: 98 GSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLA 157
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDST--GKQSALPTEQAPPSDKRA--G 173
+T GE+Y+WG + +G G + KD T L T P A G
Sbjct: 158 LTSCGELYSWG----------SNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGG 207
Query: 174 EEVVKRRKTSS----AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
K+ + R DE P + + + VA G ++ L++
Sbjct: 208 NHSFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTN 267
Query: 230 MGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
G V+ G G GQLG G S +M+P R ++ GS
Sbjct: 268 EGGVFTCGAGAYGQLGHGFSSNEMLP----------------RMVMELMGST-------- 303
Query: 289 SYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQ---RMAKCLAGDGINMGSWV 337
+ ++ACG RH+ A+V G + FG G GQ R K L + +G WV
Sbjct: 304 --ITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIGPWV 354
Score = 46.6 bits (109), Expect = 0.016, Method: Composition-based stats.
Identities = 76/287 (26%), Positives = 108/287 (37%), Gaps = 76/287 (26%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVV 107
K V CG +LA + G+L +WGS + GQ + S K H P +
Sbjct: 143 KTVVQIACGNNHSLALTSCGELYSWGS-NIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLA 201
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
A G H ++++G V+ WG C G G D T + A PT+
Sbjct: 202 AIACGGNHSFLISKSGAVFGWGRNNC----------GQLG--LNDETNR--AYPTQ---- 243
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEF----------FT----------------- 200
+K +T R A GDEF FT
Sbjct: 244 ---------LKTLRTLGVR----FVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNE 290
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLIL-SDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHL 258
+ P +V G IT+VA G RHTL L G+V+ +G G GQLG S + M+P +
Sbjct: 291 MLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVI 350
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P + + S L++ S +++I GG S V T
Sbjct: 351 GPWVSPSGSA-----LLQSKDAKVS-----VVIRQIFSGGDQSIVTT 387
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 27/116 (23%)
Query: 232 QVWGWGYGGEGQLGLGS-RIKMVPTPHLIP-----CLEHAASGKDRPL-LVRQGSVNSSG 284
+++ WG GQLGLG + + TP IP +E A G L L G V + G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACG 65
Query: 285 KAGRS--------------------YVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
S + +I+CG RHS ++D G +L++G GQ
Sbjct: 66 SNDHSQLGHDLPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQ 121
>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
Length = 5345
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 56/109 (51%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+K V +GGRH+L L+ G+V+ WG G +G+LG SR D+
Sbjct: 3552 IKKVAVHSGGRHSLALTTDGKVFSWGEGDDGKLGHFSRWNC-----------------DK 3594
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K+ R V++IACG HSA +T G L T+G G YG+
Sbjct: 3595 PRLIE------ALKSKR--VRDIACGSSHSAAITSNGDLYTWGLGEYGR 3635
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 56/109 (51%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+K V +GG+H L LS G+V+ WG G +G+LG G+R PC DR
Sbjct: 4548 IKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHGNR---------SPC--------DR 4590
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P ++ + GK V +IA GG HSA +T G L T+G G YG+
Sbjct: 4591 PRVID----SLRGKE----VVDIAAGGAHSACITANGELYTWGKGRYGR 4631
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
+ +L G D + CG F++A ++SG + TWG D+ + T H P+
Sbjct: 770 VIEKLMGQDVVRVYCGNQ--FSMALTKSGAVYTWGKGDNYRLGHGTE-DHARHPKQIEAL 826
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ V A G HC+++TE GE+Y WG E
Sbjct: 827 SSKKVKDIAIGSLHCMAITEDGELYGWGRNE 857
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 107/276 (38%), Gaps = 62/276 (22%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA + GK+ +WG DD G+ S + + P V A G +H ++T
Sbjct: 3564 SLALTTDGKVFSWGEGDD-GKLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHSAAITSN 3622
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV----- 177
G++YTWG E +G G D+T T+ P K E V
Sbjct: 3623 GDLYTWGLGE----------YGRLG--HGDNT-------TQLKPKQVKALAHERVVQVAC 3663
Query: 178 --KRRKTSSAREESENPASGD-EFFTL---------SPCLVTLNPGVKITKVAAGGRHTL 225
+ +T + +E + + GD +F L P V K+ ++ G + +L
Sbjct: 3664 GSRDAQTLALTDEGKVYSWGDGDFGKLGRGGSEGCNVPHEVDRLRDQKVCQIECGAQFSL 3723
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
L+ GQVW WG G +LG G+ V P ++ G
Sbjct: 3724 ALTKSGQVWTWGKGDYFRLGHGTDAH-VRKPQIV-----------------------EGL 3759
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQR 321
G+ V +A G H VTD+G + +G +GQ+
Sbjct: 3760 KGKKIV-HVAVGALHCLAVTDSGQVFAWGDNDHGQQ 3794
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Query: 50 DSWKD--VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLP 101
D +D VC CG F+LA ++SG++ TWG D Y G H P+
Sbjct: 3705 DRLRDQKVCQIECGAQFSLALTKSGQVWTWGKGD-----YFRLGHGTDAHVRKPQIVEGL 3759
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+V A G HC++VT++G+V+ WG
Sbjct: 3760 KGKKIVHVAVGALHCLAVTDSGQVFAWG 3787
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 75/211 (35%), Gaps = 66/211 (31%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G P+ E V+K
Sbjct: 4659 CGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKVPMKIETLQGQGVMKVEC 4713
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G V++T++G VYTWG G + + G
Sbjct: 4714 GSQFSVALTKSGSVYTWG----------------KGDYHRLGHG---------------- 4741
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ + V + RK S+ + + K+ VA G H + +D G
Sbjct: 4742 SDDHVRRPRKVSALQNK------------------------KVIDVACGSLHCVACTDTG 4777
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
+V+ WG EGQLG G+ + P L+ L
Sbjct: 4778 EVFSWGDNDEGQLGDGT-TNAIQRPRLVASL 4807
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 27/120 (22%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L+T G ++ K+ G +++ L+ G+V+ WG G G+LG GS
Sbjct: 662 PALITGLSGKQVAKICCGSSYSVALTSNGEVYSWGKGNFGRLGHGS-------------- 707
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG--RHSAVVTDAGALLTFGWGLYGQ 320
+ + P+L++ K R + ++ACG + VTD+GA+ ++G G YG+
Sbjct: 708 ---SEDQTTPMLLK------FFKGHR--IVDVACGSGDAQTLAVTDSGAVYSWGDGDYGK 756
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 97/236 (41%), Gaps = 38/236 (16%)
Query: 46 LCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE 103
L G S K V CG +++A + +G++ +WG + G+ S + TP
Sbjct: 664 LITGLSGKQVAKICCGSSYSVALTSNGEVYSWGKGN-FGRLGHGSSEDQTTPMLLKFFKG 722
Query: 104 ASVVKAA--AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
+V A +G A ++VT++G VY+WG D+G G D +
Sbjct: 723 HRIVDVACGSGDAQTLAVTDSGAVYSWG----------DGDYGKLGRGGNDGCKTPKVI- 771
Query: 162 TEQAPPSDKRAGEEVVKR---RKTSSA-----------REESENPASGDEFFTLSPCLVT 207
+K G++VV+ + S A + ++ G E P +
Sbjct: 772 -------EKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGDNYRLGHGTEDHARHPKQIE 824
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
K+ +A G H + +++ G+++GWG +GQLG S I P LI +E
Sbjct: 825 ALSSKKVKDIAIGSLHCMAITEDGELYGWGRNEQGQLGNPS-ISNFTEPTLIGGME 879
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 87/223 (39%), Gaps = 39/223 (17%)
Query: 45 RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT 102
RL K V CG + A + +G L TWG + Y G T + P
Sbjct: 3596 RLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGE-----YGRLGHGDNTTQLKPKQV 3650
Query: 103 EA----SVVKAAAGW--AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+A VV+ A G A +++T+ G+VY+WG DFG G +
Sbjct: 3651 KALAHERVVQVACGSRDAQTLALTDEGKVYSWG----------DGDFGKLGRGGSEGCN- 3699
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP---ASGDEF--------FTLSPCL 205
+P E D++ + + + S A +S GD F P +
Sbjct: 3700 ---VPHEVDRLRDQKVCQ-IECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHVRKPQI 3755
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3756 VEGLKGKKIVHVAVGALHCLAVTDSGQVFAWGDNDHGQQGNGT 3798
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 29/127 (22%)
Query: 198 FFTLSPCLVTLNP--GVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
+ +LSP L LN ++ ++A+ G+H + L+ G+V+ WG G G+LG G
Sbjct: 601 YTSLSPTLQQLNGFGDREVIRIASHPDGKHYMGLTSDGEVFSWGNGDGGKLGHGDY---- 656
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
H P L SGK V +I CG +S +T G + ++
Sbjct: 657 -QNHEEPALITGLSGKQ--------------------VAKICCGSSYSVALTSNGEVYSW 695
Query: 314 GWGLYGQ 320
G G +G+
Sbjct: 696 GKGNFGR 702
>gi|218193272|gb|EEC75699.1| hypothetical protein OsI_12517 [Oryza sativa Indica Group]
Length = 555
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 134/331 (40%), Gaps = 65/331 (19%)
Query: 19 ETVVYMWGY-LPGTSPEKSP-----ILSPIPARLCGGDS-----WKDV-CGGGCGFALAT 66
++ +Y+WGY G + K I +P +L W DV CG G A+A+
Sbjct: 94 KSAIYLWGYNHSGQTARKGKECHLRIPKSLPPKLFKWQDGKNLRWIDVACGRGHTAAVAS 153
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAAGWAHCVS-VTEAGE 124
G L TWG A+D GQ L G EP + E VK+ + AHC + V E E
Sbjct: 154 D--GSLYTWG-ANDFGQ--LGDGTEESAKEPQKVKALETEFVKSVSCGAHCTAAVAEPRE 208
Query: 125 ---------VYTWGWRECVPSAKVTRDFGSAGS----FQKDSTGKQSALPTEQAPPSDKR 171
++ WG + + R F A + ++ S G + +
Sbjct: 209 NNGTISRSRLWVWGQNQ---GSDYPRLFWGALAPNTVIRQVSCGAVHVMALSEDGLLQAW 265
Query: 172 AGEEV--VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
E + R TS + + + F +P LV KI +V+ G HT +S+
Sbjct: 266 GYNEYGQLGRGCTSEGLQGARVLNAYARFLDEAPELV------KIVRVSCGEYHTAAISE 319
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
G+V+ WG G GQLG S D+ L+ R+ R+
Sbjct: 320 NGEVYTWGLGSMGQLGHCS-----------------LQSGDKELIPRRVVA-----LDRT 357
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+++++CGG HS VT+ GAL +G G GQ
Sbjct: 358 VIRDVSCGGVHSCAVTEDGALYAWGGGHVGQ 388
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 81/220 (36%), Gaps = 68/220 (30%)
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
P +V+ + G H +++E GEVYTWG GS G S
Sbjct: 299 PELVKIVRVSCGEYHTAAISENGEVYTWG-------------LGSMGQLGHCSL------ 339
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
+ +E++ RR +V L+ V I V+ G
Sbjct: 340 ---------QSGDKELIPRR------------------------VVALDRTV-IRDVSCG 365
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
G H+ +++ G ++ WG G GQLGLG P C A +G D L +
Sbjct: 366 GVHSCAVTEDGALYAWGGGHVGQLGLG------PQSGFFSC---ALNGSDMLLRNIPVLI 416
Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
SG V+ + CG H+ V + +G+ YGQ
Sbjct: 417 IPSG------VQLVTCGHSHTLVSMKDSRIYGWGYNSYGQ 450
>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
Length = 2154
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 30/52 (57%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
G I V G HTL+L+ G VWGWG EGQLGLG V P L+PCL
Sbjct: 2094 GYFIEDVVCGAEHTLVLTSDGDVWGWGSNSEGQLGLGHTNSPVREPQLVPCL 2145
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 113/302 (37%), Gaps = 89/302 (29%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATS---------ESGKLITWGSADDEGQSYLTSGKHG 92
+P+ C S + VCG C F + + G+L G++DD S G
Sbjct: 1827 VPSFSC---SQQIVCGQNCTFVVQNNGTVLACGEGSYGRL-GQGNSDDLHSLTAISSIQG 1882
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
F + A+ V + H ++VTE+GEV++WG D+G G D
Sbjct: 1883 -----FVVTQLATSVGSDG---HTLAVTESGEVFSWG----------DGDYGKLGHGNSD 1924
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL----------- 201
+ + Q GEEV+ + S + S + + FT
Sbjct: 1925 RQRRPRQIEALQ--------GEEVI---QLSCGFKHSAVVTADGKLFTFGNGDYGRLGLG 1973
Query: 202 ------SPCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGSRIKMVP 254
P V +I VA G HTL +S D VW +G G G+LG G+ +
Sbjct: 1974 TTTNKKVPTRVVALESHQIGYVACGLNHTLCVSADGTNVWAFGDGDFGKLGQGNTV---- 2029
Query: 255 TPHLIPCLEHAASGKDRPLLVR--QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
GK P ++ QG V +K++ACG + S ++ G + T
Sbjct: 2030 -------------GKHLPTKIKALQGHV----------IKKVACGTQFSVALSKYGKVFT 2066
Query: 313 FG 314
+G
Sbjct: 2067 WG 2068
>gi|330822422|ref|XP_003291651.1| hypothetical protein DICPUDRAFT_156281 [Dictyostelium purpureum]
gi|325078150|gb|EGC31817.1| hypothetical protein DICPUDRAFT_156281 [Dictyostelium purpureum]
Length = 453
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 88/231 (38%), Gaps = 77/231 (33%)
Query: 96 EPFPLPTEA-----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
+P P+ E+ +++K GW H + +T G+++TWG+ T+D + F
Sbjct: 191 QPLPVEIESLSKLGNIIKLECGWGHSLVLTSDGDIFTWGF---------TQDSQTGHGF- 240
Query: 151 KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNP 210
SE P P ++ N
Sbjct: 241 --------------------------------------SEEPIH-------IPKMIKTN- 254
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
K + G L +++ G+V WG G GQLG G K V P LI ++
Sbjct: 255 -YKFKNIFTGSDFNLAITNDGRVCSWGSGEFGQLGHGDT-KNVEAPKLIQSIQ------- 305
Query: 271 RPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
PL V +N++ R Y K +ACG H+ ++ + G LLT GW GQ
Sbjct: 306 -PL-VHTNLINTN----RIYEYKMVACGFSHALIIDNDGKLLTLGWNGNGQ 350
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 24/119 (20%)
Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
F ++ P LVT KI +VA G RHTL+L++ +V+ +G G E QLG+GS
Sbjct: 136 NFKSIIPSLVTPLKDFKIKQVAGGRRHTLVLTEDFRVFSFGVGSEYQLGVGST------- 188
Query: 257 HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGW 315
+++PL V S++ G + ++ CG HS V+T G + T+G+
Sbjct: 189 ------------ENQPLPVEIESLSKLGN-----IIKLECGWGHSLVLTSDGDIFTWGF 230
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 37/77 (48%), Gaps = 11/77 (14%)
Query: 60 CGF--ALATSESGKLITWGSADDEGQSYLTSGKHGE-----TPEPFPLPTEASVVKAAAG 112
CGF AL GKL+T G G L SG G+ T F E VVK +AG
Sbjct: 326 CGFSHALIIDNDGKLLTLGW---NGNGQLGSGVKGDNHLVPTKLEFDFDGEK-VVKVSAG 381
Query: 113 WAHCVSVTEAGEVYTWG 129
H +TE+G++Y WG
Sbjct: 382 RNHSACITESGKLYIWG 398
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 108/300 (36%), Gaps = 95/300 (31%)
Query: 22 VYMWGYLP----GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGS 77
++ WG+ G + PI IP + +K++ G F LA + G++ +WGS
Sbjct: 225 IFTWGFTQDSQTGHGFSEEPI--HIPKMIKTNYKFKNIFTGS-DFNLAITNDGRVCSWGS 281
Query: 78 ADDEGQSYLTSGKHGETPEPF----PLPTEASVVK---------AAAGWAHCVSVTEAGE 124
+ GQ K+ E P+ PL +++ A G++H + + G+
Sbjct: 282 GE-FGQLGHGDTKNVEAPKLIQSIQPL-VHTNLINTNRIYEYKMVACGFSHALIIDNDGK 339
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+ T GW G GS K G +PT+ D
Sbjct: 340 LLTLGWNGN----------GQLGSGVK---GDNHLVPTKLEFDFD--------------- 371
Query: 185 AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
G K+ KV+AG H+ +++ G+++ WG G +G+L
Sbjct: 372 --------------------------GEKVVKVSAGRNHSACITESGKLYIWGNGNKGKL 405
Query: 245 GLGSRIKMVPTP-HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
G G + TP LI E+ ++ +L I+CG H+ +
Sbjct: 406 GNGKSVGDQLTPLELIDIDENNTDPSNQKVL------------------NISCGFDHTII 447
>gi|226311363|ref|YP_002771257.1| hypothetical protein BBR47_17760 [Brevibacillus brevis NBRC 100599]
gi|226094311|dbj|BAH42753.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 323
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVPTPH 257
P LV GV TK+AAG H+L L G VWGWG+ G+GQLG + K V
Sbjct: 73 PVLVKGLTGV--TKIAAGSSHSLALKSDGTVWGWGWNGKGQLGNNTTTSSNISKPVQAVG 130
Query: 258 LIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGR----SYVKEIACGGRHSAVVTDAG 308
L ++ AA L + G+V NS+ R + V+ IA G H+ V G
Sbjct: 131 LTDVIDIAAGDAHGLALKKDGTVWIWGSNSTNLPTRVESLTDVRAIAAAGAHNLTVKKDG 190
Query: 309 ALLTFGWGLYGQ 320
+ ++GW YGQ
Sbjct: 191 TVWSWGWNGYGQ 202
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 47/108 (43%), Gaps = 27/108 (25%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+ AAGG H+LIL G VW WG G GQLG G+ E ++ P
Sbjct: 31 NVISSAAGGSHSLILRSDGTVWAWGNNGNGQLGDGT-------------FEQ----RNEP 73
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+LV+ G + V +IA G HS + G + +GW GQ
Sbjct: 74 VLVK----------GLTGVTKIAAGSSHSLALKSDGTVWGWGWNGKGQ 111
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 89/266 (33%), Gaps = 55/266 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +L G + WG + G L G + EP + V K AAG +H ++
Sbjct: 38 GGSHSLILRSDGTVWAWG---NNGNGQLGDGTFEQRNEPVLVKGLTGVTKIAAGSSHSLA 94
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+ G V+ WGW K G + + + P +V+
Sbjct: 95 LKSDGTVWGWGWN------------------GKGQLGNNTTTSSNISKPVQAVGLTDVID 136
Query: 179 RRKTSS----AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+ +++ G L + +L + +AA G H L + G VW
Sbjct: 137 IAAGDAHGLALKKDGTVWIWGSNSTNLPTRVESL---TDVRAIAAAGAHNLTVKKDGTVW 193
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
WG+ G GQLG+ + KD P V S + +
Sbjct: 194 SWGWNGYGQLGINN-----------------TGSKDVPTKVSN----------LSNIVSV 226
Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQ 320
A G HS + G + +G YGQ
Sbjct: 227 AAGFHHSLALDVEGKVYAWGGNTYGQ 252
>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
Length = 4777
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 25/112 (22%)
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
N VK V +GGRH + L+ G+V+ WG G +G+LG SR+
Sbjct: 3006 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNC---------------- 3049
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
D+P L+ + K R +++IACG HSA +T +G L ++G G YG+
Sbjct: 3050 -DKPRLIE------ALKTKR--IRDIACGSSHSAAITSSGELYSWGLGEYGR 3092
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 60/123 (48%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P L+ KI K+AA G+H L LS G+V+ WG G G+LG G
Sbjct: 432 TLAPMLIHGLSSRKIVKLAAHPDGQHFLALSTSGEVYSWGCGDGGRLGHGD--------- 482
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
A+ + P L+ S +GK V +IACG +SA VT G L T+G G
Sbjct: 483 --------ATYLEEPALITTFSGKQTGKQ----VVQIACGSTYSAAVTADGELYTWGRGN 530
Query: 318 YGQ 320
YG+
Sbjct: 531 YGR 533
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 3970 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4020
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V +IA GG HSA +T +G L T+G G Y
Sbjct: 4021 PC--------DRPRVI---------ESLRGVEVVDIAAGGAHSACITASGELFTWGKGRY 4063
Query: 319 GQ 320
G+
Sbjct: 4064 GR 4065
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
D+ CG F++A ++ G++ TWG D++ + T +H P+ VV A
Sbjct: 609 DIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD-EHVRYPKLLDSLQGKKVVDIAV 667
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++T+ GEV++WG
Sbjct: 668 GSTHCLALTDEGEVHSWG 685
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 105/279 (37%), Gaps = 68/279 (24%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
A+A + GK+ +WG DD G+ S + + P + A G +H ++T +
Sbjct: 3021 AMALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS 3079
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEEVVKRRK 181
GE+Y+WG E +G G D+T T+ P K G V++
Sbjct: 3080 GELYSWGLGE----------YGRLG--HGDNT-------TQLRPKLVKVLLGHRVIQ--- 3117
Query: 182 TSSAREESENPASGDEFFTLS-------------------PCLVTLNPGVKITKVAAGGR 222
+ +++ A DE S P + G + ++ G +
Sbjct: 3118 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQ 3177
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
+L L+ G VW WG G +LG G+ + V P ++
Sbjct: 3178 FSLALTKSGVVWTWGKGDYFRLGHGTDVH-VRKPQIV----------------------- 3213
Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQR 321
G G+ V +A G H VTD+G + +G +GQ+
Sbjct: 3214 EGLRGKKIV-HVAVGALHCLAVTDSGQVYAWGDNDHGQQ 3251
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3169 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGTDVHVRKPQIVEGLRGKKIVH 3223
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 3224 VAVGALHCLAVTDSGQVYAWG 3244
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4148 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4206
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4207 CTEDGEVYTWG 4217
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 102/272 (37%), Gaps = 45/272 (16%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWA 114
GG A + GK+ G A + S + P + V K A +G
Sbjct: 2960 AGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGR 3019
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H +++T G+V++WG D G G F + + K + + A
Sbjct: 3020 HAMALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACG 3069
Query: 175 EVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLI 226
TSS E GD L P LV + G ++ +VA G R TL
Sbjct: 3070 SSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLA 3129
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
L+D G V+ WG G G+LG G + G + P + + +N G
Sbjct: 3130 LTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG-- 3168
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
V +I CG + S +T +G + T+G G Y
Sbjct: 3169 ----VCQIECGAQFSLALTKSGVVWTWGKGDY 3196
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 38 ILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG---- 92
+ +P+ G DV CG G LA +E+G++ +WG D Y G+ G
Sbjct: 542 VTTPMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGC 596
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+TP+ + +VK G V++T+ G+VYTWG
Sbjct: 597 KTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWG 633
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 27/117 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P LVT G K+ VA +G TL +++ GQVW WG G G+LG G
Sbjct: 544 TPMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG------------ 591
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
+ G P LV K + ++ CG + S +T G + T+G G
Sbjct: 592 -----GSDGCKTPKLVE--------KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKG 635
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3202 GTDVHVRKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3255
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 31/138 (22%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-HAA--- 266
GV++ +AAGG H+ ++ G+++ WG G G+LG G + P L+ L+ H
Sbjct: 4033 GVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQL-KPKLVDALQGHRVIDV 4091
Query: 267 ---SGKDRPLLVRQGSV------NSSGKAGRS-----------------YVKEIACGGRH 300
SG + L + + GK GR V ++ CG +
Sbjct: 4092 ACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQF 4151
Query: 301 SAVVTDAGALLTFGWGLY 318
S +T +GA+ T+G G Y
Sbjct: 4152 SVALTKSGAVYTWGKGDY 4169
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 15/84 (17%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----S 105
K G LA S G++ +WG A+D GK G +P P E+
Sbjct: 3984 KVAVNSGGKHCLALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGVE 4035
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
VV AAG AH +T +GE++TWG
Sbjct: 4036 VVDIAAGGAHSACITASGELFTWG 4059
>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
Length = 3645
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 25/112 (22%)
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
N VK V +GGRH + L+ G+V+ WG G +G+LG SR+
Sbjct: 1853 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNC---------------- 1896
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
D+P L+ + K R +++IACG HSA +T +G L ++G G YG+
Sbjct: 1897 -DKPRLIE------ALKTKR--IRDIACGSSHSAAITSSGELYSWGLGEYGR 1939
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+++ WG +G+LG G+R
Sbjct: 2838 TPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDGKLGHGNR---------S 2888
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V +IA GG HSA +T +G L T+G G Y
Sbjct: 2889 PC--------DRPRVI---------ESLRGVEVVDIAAGGAHSACITASGELYTWGKGRY 2931
Query: 319 GQ 320
G+
Sbjct: 2932 GR 2933
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ ++ K G A+A + GK+ +WG DD G+ S + + P
Sbjct: 1843 PIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 1901
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+Y+WG E +G G D+T
Sbjct: 1902 IEALKTKRIRDIACGSSHSAAITSSGELYSWGLGE----------YGRLG--HGDNT--- 1946
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G VV + + +++ A DE S
Sbjct: 1947 ----TQLRPKLVKVLLGHRVV---QVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGS 1999
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG G+ + V P
Sbjct: 2000 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH-VRKPQ 2058
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VT+ G + +G
Sbjct: 2059 MV-----------------------EGLRGKKIV-HVAVGALHCLAVTETGQVFAWGDND 2094
Query: 318 YGQR 321
+GQ+
Sbjct: 2095 HGQQ 2098
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 3016 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3074
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 3075 CTEDGEVYTWG 3085
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 108/280 (38%), Gaps = 61/280 (21%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
GG A + GK+ G A T+G+ G + P+P + S VVK
Sbjct: 1807 AGGSKSLFAVTAEGKVYACGEA--------TNGRLGLGLSSGTIPIPRQISALSNYVVKK 1858
Query: 110 AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
A G H +++T G+V++WG D G G F + + K + +
Sbjct: 1859 VAVHSGGRHAMALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 1908
Query: 167 PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
A TSS E GD L P LV + G ++ +VA G
Sbjct: 1909 RIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACG 1968
Query: 221 GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
R TL L+D G V+ WG G G+LG G + G + P + +
Sbjct: 1969 SRDAQTLALTDEGMVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 2010
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+N G V +I CG + S +T +G + T+G G Y
Sbjct: 2011 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDY 2043
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 15/84 (17%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----S 105
K G LA S G+L +WG A+D GK G +P P E+
Sbjct: 2852 KVAVNSGGKHCLALSSEGELYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGVE 2903
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
VV AAG AH +T +GE+YTWG
Sbjct: 2904 VVDIAAGGAHSACITASGELYTWG 2927
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 31/138 (22%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-HAA--- 266
GV++ +AAGG H+ ++ G+++ WG G G+LG G + P L+ L+ H
Sbjct: 2901 GVEVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGDSEDQL-KPKLVEALQGHRVIDV 2959
Query: 267 ---SGKDRPLLVRQGSV------NSSGKAGRS-----------------YVKEIACGGRH 300
SG + L + + GK GR V ++ CG +
Sbjct: 2960 ACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQF 3019
Query: 301 SAVVTDAGALLTFGWGLY 318
S +T +GA+ T+G G Y
Sbjct: 3020 SVALTKSGAVYTWGKGDY 3037
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L +++ GQV+ WG GQ G G+
Sbjct: 2049 GTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGT 2102
>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC2-like [Xenopus (Silurana) tropicalis]
Length = 4845
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 25/112 (22%)
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
N VK V +GGRH L+ G+V+ WG G +G+LG SR+
Sbjct: 3048 NYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC---------------- 3091
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
D+P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3092 -DKPRLIE------ALKTKR--IRDIACGSSHSAAITSSGELYTWGLGEYGR 3134
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 60/121 (49%), Gaps = 27/121 (22%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4040 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4090
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
PC DRP ++ + V +IA GG HSA +T AG L T+G G YG
Sbjct: 4091 PC--------DRPRVIE--------SLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYG 4134
Query: 320 Q 320
+
Sbjct: 4135 R 4135
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 55/123 (44%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL P LV I K+AA G+H L LS +++ WG G G+LG G + + P
Sbjct: 481 TLGPQLVQGLASRNIVKIAAHPDGQHYLALSATSELFSWGCGDGGRLGHGDTVSL-EEPK 539
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
L+ L SGK V IACG +SA +T G L T+G G
Sbjct: 540 LVSAL--------------------SGKQTGKQVIHIACGSTYSAAITADGELYTWGRGN 579
Query: 318 YGQ 320
YG+
Sbjct: 580 YGR 582
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
D+ CG F++A ++ G++ +WG D++ + T +H P+ VV A
Sbjct: 658 DIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTE-EHVRYPKIMNGLQGKKVVDVAV 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE+GEVY+WG
Sbjct: 717 GSTHCLALTESGEVYSWG 734
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 95/236 (40%), Gaps = 38/236 (16%)
Query: 46 LCGGDSWKDVCGGGCG--FALATSESGKLITWG----------SADDEGQSYLTSGKHGE 93
L G + K V CG ++ A + G+L TWG S++D+ L +G G
Sbjct: 544 LSGKQTGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLVTGLKG- 602
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
+ V +G A +SVTE G+V++WG D+G G D
Sbjct: 603 --------LKVVDVSCGSGDAQTLSVTENGQVWSWG----------DGDYGKLGRGGSDG 644
Query: 154 TGKQSALPTEQAPPSDK-RAGEE----VVKRRKTSS-AREESENPASGDEFFTLSPCLVT 207
+ Q K R G + + K + S + +++ G E P ++
Sbjct: 645 CKTPKLIEKLQDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMN 704
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G K+ VA G H L L++ G+V+ WG + Q RI P P ++P L+
Sbjct: 705 GLQGKKVVDVAVGSTHCLALTESGEVYSWGSNDQCQHFDTLRIAK-PVPSVLPGLD 759
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4218 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4276
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4277 CTEDGEVYTWG 4287
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 15/84 (17%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----S 105
K G LA S G++ +WG A+D GK G +P P E+
Sbjct: 4054 KVAVNSGGKHCLALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGTE 4105
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
VV AAG AH +T AGE+YTWG
Sbjct: 4106 VVDIAAGGAHSACITAAGELYTWG 4129
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 81/209 (38%), Gaps = 36/209 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
GG A + GK+ G A T+G+ G + P+P + + VVK
Sbjct: 3002 AGGSKSLFAVTAEGKVYACGEA--------TNGRLGLGISSGTVPIPRQITALSNYVVKK 3053
Query: 110 AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
A G H ++T G+V++WG D G G F + + K + +
Sbjct: 3054 VAVHSGGRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3103
Query: 167 PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
A TSS E GD L P +V + G ++ +VA G
Sbjct: 3104 RIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3163
Query: 221 GR--HTLILSDMGQVWGWGYGGEGQLGLG 247
R TL L+D G V+ WG G G+LG G
Sbjct: 3164 SRDAQTLALTDEGLVFSWGDGDFGKLGRG 3192
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ ++ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3038 PIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3096
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3097 IEALKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3131
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 60/148 (40%), Gaps = 33/148 (22%)
Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
P LVT G+K+ V+ +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 594 PMLVTGLKGLKVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 652
Query: 261 CLEHAASGKDR------PLLVRQGSVNSSGKAGRSY----------------------VK 292
L+ K R + + G V S GK V
Sbjct: 653 KLQDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVV 712
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQ 320
++A G H +T++G + + WG Q
Sbjct: 713 DVAVGSTHCLALTESGEV--YSWGSNDQ 738
>gi|397480406|ref|XP_003811475.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2 [Pan
paniscus]
gi|426375451|ref|XP_004054552.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 3
[Gorilla gorilla gorilla]
gi|194376922|dbj|BAG63022.1| unnamed protein product [Homo sapiens]
Length = 556
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 106/284 (37%), Gaps = 90/284 (31%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL + K C G G LAT+E G++ TWG S L +G P
Sbjct: 94 PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 149
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG+ +++G+
Sbjct: 150 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY---------------------NNSGQ 188
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
+ T P + RR T + + +
Sbjct: 189 VGSGSTVNQP----------IPRRVTGCLQNKV------------------------VVT 214
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
+A G + + D G+V+ WGY G GQLGLG+ PT PC A G +R
Sbjct: 215 IACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ-PT----PCRVAALQG------IR 263
Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 264 --------------VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 293
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
+PC V G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 252 TPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 307
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 236
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 237 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 86 GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 140
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 141 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 180
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 181 WGYNNSGQ 188
>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu rubripes]
Length = 4822
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 25/112 (22%)
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
N VK V +GGRH + L+ G+V+ WG G +G+LG SR+ C
Sbjct: 3030 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN---------C------- 3073
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
D+P L+ + K R +++IACG HSA +T +G L ++G G YG+
Sbjct: 3074 -DKPRLIE------ALKTKR--IRDIACGSSHSAAITSSGELYSWGLGEYGR 3116
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 60/123 (48%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P L+ KI K+AA G+H L LS G+V+ WG G G+LG G
Sbjct: 467 TLAPMLIHSLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGD--------- 517
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
A+ + P ++ +GK +V IACG +SAV+T G L T+G G
Sbjct: 518 --------ATYLEEPTMI----AAFNGKQAGKHVVHIACGSTYSAVITIDGELYTWGRGN 565
Query: 318 YGQ 320
YG+
Sbjct: 566 YGR 568
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4015 TPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4065
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V +IA GG HSA +T +G L T+G G Y
Sbjct: 4066 PC--------DRPRVI---------ESLRGVEVVDIAAGGAHSACITASGELFTWGKGRY 4108
Query: 319 GQ 320
G+
Sbjct: 4109 GR 4110
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
D+ CG F++A ++ G++ TWG D++ + T +H P+ VV A
Sbjct: 644 DIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD-EHVRFPKLLDTLQGKKVVDVAV 702
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++T+ GEV++WG
Sbjct: 703 GSTHCLALTDDGEVHSWG 720
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 110/304 (36%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ ++ K G A+A + GK+ +WG DD G+ S + + P
Sbjct: 3020 PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3078
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+Y+WG E +G G
Sbjct: 3079 IEALKTKRIRDIACGSSHSAAITSSGELYSWGLGE----------YGRLGHGDN------ 3122
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3123 ---ATQLRPKLVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3176
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG G+ + V P
Sbjct: 3177 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH-VRKPQ 3235
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD G + +G
Sbjct: 3236 MV-----------------------EGLRGKKIV-HVAVGALHCLAVTDTGQVYAWGDND 3271
Query: 318 YGQR 321
+GQ+
Sbjct: 3272 HGQQ 3275
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4193 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4251
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4252 CTEDGEVYTWG 4262
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 112/280 (40%), Gaps = 67/280 (23%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAA--GWAHCVSV 119
+ SE G LI S Q+Y ++ T P + + +S +VK AA H +++
Sbjct: 442 IVCSEKGFLILSSSGAVYTQNYKST-----TLAPMLIHSLSSRKIVKLAAHPDGQHYLAL 496
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSF-QKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+ GEV++WG C G G D+T + PT A + K+AG+ VV
Sbjct: 497 SSNGEVFSWG---C----------GDGGRLGHGDATYLEE--PTMIAAFNGKQAGKHVVH 541
Query: 179 RR--KTSSA------------REESENPASGDEFFTLSPCLVTLNPGVKITKVA--AGGR 222
T SA R G +P LVT G+K+ VA +G
Sbjct: 542 IACGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDA 601
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
TL +++ GQVW WG G G+LG G + G P LV
Sbjct: 602 QTLAVTENGQVWSWGDGDYGKLGRG-----------------GSDGCKTPKLVE------ 638
Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQRM 322
K + ++ CG + S +T G + T+G G QR+
Sbjct: 639 --KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKG-DNQRL 675
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 108/280 (38%), Gaps = 61/280 (21%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
GG A + GK+ G A T+G+ G + P+P + + VVK
Sbjct: 2984 AGGSKSLFAVTVEGKIYACGEA--------TNGRLGLGLSSGTIPIPRQITALSNYVVKK 3035
Query: 110 AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
A G H +++T G+V++WG D G G F + + K + +
Sbjct: 3036 VAVHSGGRHAMALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3085
Query: 167 PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
A TSS E GD L P LV + G ++ +VA G
Sbjct: 3086 RIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNATQLRPKLVKVLLGHRVIQVACG 3145
Query: 221 GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
R TL L+D G V+ WG G G+LG G + G + P + +
Sbjct: 3146 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 3187
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+N G V +I CG + S +T +G + T+G G Y
Sbjct: 3188 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDY 3220
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAA 111
CG G LA +E+G++ +WG D Y G+ G +TP+ + +VK
Sbjct: 596 CGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKTPKLVEKLQDLDIVKVCC 650
Query: 112 GWAHCVSVTEAGEVYTWG 129
G V++T+ G+VYTWG
Sbjct: 651 GSQFSVALTKDGQVYTWG 668
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3226 GTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT 3279
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 31/138 (22%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-HAA--- 266
GV++ +AAGG H+ ++ G+++ WG G G+LG G + P L+ L+ H
Sbjct: 4078 GVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQL-KPKLVDALQGHRVIDV 4136
Query: 267 ---SGKDRPLLVRQGSV------NSSGKAGRS-----------------YVKEIACGGRH 300
SG + L + + GK GR V ++ CG +
Sbjct: 4137 ACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVTKVECGSQF 4196
Query: 301 SAVVTDAGALLTFGWGLY 318
S +T +GA+ T+G G Y
Sbjct: 4197 SVALTKSGAVYTWGKGDY 4214
Score = 37.7 bits (86), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 15/84 (17%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----S 105
K G LA S G++ +WG A+D GK G +P P E+
Sbjct: 4029 KVAVNSGGKHCLALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGVE 4080
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
VV AAG AH +T +GE++TWG
Sbjct: 4081 VVDIAAGGAHSACITASGELFTWG 4104
>gi|26351011|dbj|BAC39142.1| unnamed protein product [Mus musculus]
Length = 163
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
+ KVAAGG H++ LS+ G ++ WG+ GQL L +R E G L
Sbjct: 1 MAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEEL 60
Query: 274 LVRQGSVNSSGKAGRSYVKEI-----------ACGGRHSAVVTDAGALLTFGWGLYGQ 320
V + A + + + +CG RH+AVVT G L T+GWG YGQ
Sbjct: 61 AVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQ 118
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 28/144 (19%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
+ K AAG H V ++E G++Y WGW E Q ALPT
Sbjct: 1 MAKVAAGGWHSVCLSETGDIYIWGWNE----------------------SGQLALPTRSG 38
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGD--EFFTLSP--CLVTLNPGVKITKVAAGG 221
++ +A E +EE +G F + P L+ L G + G
Sbjct: 39 --TENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGS 96
Query: 222 RHTLILSDMGQVWGWGYGGEGQLG 245
RHT +++ G+++ WG+G GQLG
Sbjct: 97 RHTAVVTRTGELYTWGWGKYGQLG 120
>gi|431920246|gb|ELK18281.1| RCC1 domain-containing protein 1 [Pteropus alecto]
Length = 181
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 62/142 (43%), Gaps = 29/142 (20%)
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AA GW H V V+E G++Y WGW E Q ALPT
Sbjct: 5 AAGGW-HSVCVSETGDIYIWGWNE----------------------SGQLALPTRSLVED 41
Query: 169 DKRAGEEVVKRRKTSSARE---ESENPASGDEFFTLSP--CLVTLNPGVKITKVAAGGRH 223
K + ++ K S E+E+ A F ++ P L+ L G K + G RH
Sbjct: 42 KKAVAGQAIRLNKDGSEENRIVEAEDGAPA-AFISVQPFPALLDLPLGSDAVKASCGSRH 100
Query: 224 TLILSDMGQVWGWGYGGEGQLG 245
T +++ G+++ WG+G GQLG
Sbjct: 101 TAVVTRTGELYTWGWGKYGQLG 122
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 17/119 (14%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP----CLEHAASGKDRP 272
VAAGG H++ +S+ G ++ WG+ GQL L +R +V + L S ++R
Sbjct: 4 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-SLVEDKKAVAGQAIRLNKDGSEENRI 62
Query: 273 LLVRQGSVNSSGKA-----------GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ G+ + G VK +CG RH+AVVT G L T+GWG YGQ
Sbjct: 63 VEAEDGAPAAFISVQPFPALLDLPLGSDAVKA-SCGSRHTAVVTRTGELYTWGWGKYGQ 120
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP + VKA+ G H VT GE+YTWGW
Sbjct: 77 QPFPALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGW 115
>gi|354465912|ref|XP_003495420.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Cricetulus griseus]
Length = 1136
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 25/108 (23%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
K+ +VA GG HT++L+D V+ +G G GQLGLG+ + P +I + KD+
Sbjct: 282 KVIQVACGGGHTVVLTD-KVVYAFGLGQFGQLGLGTFLFETSEPKVIERI------KDQK 334
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ SY I+CG H+A++TD G + TFG G +G+
Sbjct: 335 I---------------SY---ISCGENHTALMTDIGLMYTFGDGRHGK 364
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 53/138 (38%), Gaps = 29/138 (21%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL- 262
C+ L P K+ A G HTL+ +D G V+ G EGQLGLG T H I
Sbjct: 118 CIKALKPE-KVKLAACGRNHTLVSTDKGSVYAAGGNNEGQLGLGDTDDR-DTFHQIGFFT 175
Query: 263 ------EHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IAC 296
+ +A L G + NS G+ G I+C
Sbjct: 176 PKDNIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISWISC 235
Query: 297 GGRHSAVVTDAGALLTFG 314
G HSA VT G L TFG
Sbjct: 236 GYYHSAFVTVDGELYTFG 253
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 30/133 (22%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASGKDR 271
++ G HT I++ +++ +G GQLGLGS+ + P I L + AA G++
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSK-SAISKPTCIKALKPEKVKLAACGRNH 136
Query: 272 PLL-VRQGSV-----NSSGKAG------------------RSYVKEIACGGRHSAVVTDA 307
L+ +GSV N+ G+ G + +K+++ G SA +T+
Sbjct: 137 TLVSTDKGSVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPKDNIKQLSAGANTSAALTED 196
Query: 308 GALLTFGWGLYGQ 320
G L +G GQ
Sbjct: 197 GKLFMWGDNSEGQ 209
>gi|332241905|ref|XP_003270125.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Nomascus leucogenys]
Length = 556
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 106/284 (37%), Gaps = 90/284 (31%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL + K C G G LAT+E G++ TWG S L +G P
Sbjct: 94 PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 149
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG+ +++G+
Sbjct: 150 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY---------------------NNSGQ 188
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
+ T P + RR T + + +
Sbjct: 189 VGSGSTVNQP----------IPRRVTGCLQNKV------------------------VVT 214
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
+A G + + D G+V+ WGY G GQLGLG+ PT PC A G +R
Sbjct: 215 IACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ-PT----PCRVAALQG------IR 263
Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 264 --------------VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 293
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
+PC V G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 252 TPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 307
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 236
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 237 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 86 GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 140
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 141 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 180
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 181 WGYNNSGQ 188
>gi|221127499|ref|XP_002163753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Hydra
magnipapillata]
Length = 350
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 20/129 (15%)
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI--PCLE 263
V L +K+ +AAGG H L++SD G ++GWG+ GQ+G+ ++ P L
Sbjct: 212 VDLLEPLKVKDIAAGGWHCLVISDSGDLYGWGWNESGQIGVIKEDSDESEEEILSFPKLL 271
Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQRMA 323
+ S D P + Q ++ S G RHS+ V+ G L ++GW YGQ M
Sbjct: 272 FSPSLVDTP--IEQTFISVSA------------GSRHSSAVSSNGLLFSWGWNGYGQLM- 316
Query: 324 KCLAGDGIN 332
GD +N
Sbjct: 317 ---HGDFLN 322
>gi|146185478|ref|XP_001031903.2| Kinesin motor domain containing protein [Tetrahymena thermophila]
gi|146143053|gb|EAR84240.2| Kinesin motor domain containing protein [Tetrahymena thermophila
SB210]
Length = 1349
Score = 57.8 bits (138), Expect = 7e-06, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 23/112 (20%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L + + I +V G +H++ LS GQV+ WG G EGQLG + ++ + TP +I
Sbjct: 1007 PILANIPQTIPIVQVVCGWQHSMALSSSGQVYSWGLGEEGQLG-HNDMETLNTPKMIEYF 1065
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
A +K I+CG HSA +++ G L T+G
Sbjct: 1066 SQQA----------------------KQIKYISCGHSHSAAISEEGDLYTWG 1095
Score = 46.6 bits (109), Expect = 0.018, Method: Composition-based stats.
Identities = 55/280 (19%), Positives = 107/280 (38%), Gaps = 57/280 (20%)
Query: 68 ESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYT 127
++G+L WG + GQ +S + P +P +V+ GW H ++++ +G+VY+
Sbjct: 981 QTGELYLWGKGN-SGQLGNSSFNSSKVPILANIPQTIPIVQVVCGWQHSMALSSSGQVYS 1039
Query: 128 WGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE 187
WG G G + + T P + ++ + + S
Sbjct: 1040 WG-------------LGEEGQLGHND------METLNTPKMIEYFSQQAKQIKYISCGHS 1080
Query: 188 ESENPASGDEFFT-----------------LSPCLVTLN--------PGVKITK------ 216
S + + +T P L L+ G I++
Sbjct: 1081 HSAAISEEGDLYTWGCNYDYRLMINENKNQYKPVLTQLHYLKEIYQKSGQDISQKFNVQL 1140
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLIPCLEHAASGKDRPLL 274
V+ G HT +++ G V+ G G G+LG L + I C +++ + ++R
Sbjct: 1141 VSLGVNHTAVITVDGSVYTAGLGNHGELGIILNESVPNTDIIRDIVCQQNSNNVEERCCY 1200
Query: 275 VRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
+ + V + G+ ++ +IACG + V+ G + FG
Sbjct: 1201 LHK--VQTFGEENKAI--DIACGYEFTIVLNAEGTVYQFG 1236
Score = 40.8 bits (94), Expect = 0.81, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 19/119 (15%)
Query: 22 VYMWGYLPGTSPE---------KSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKL 72
+Y+WG G S + K PIL+ IP + + VCG ++A S SG++
Sbjct: 985 LYLWG--KGNSGQLGNSSFNSSKVPILANIPQTI---PIVQVVCG--WQHSMALSSSGQV 1037
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFP-LPTEASVVK-AAAGWAHCVSVTEAGEVYTWG 129
+WG + EGQ + TP+ +A +K + G +H +++E G++YTWG
Sbjct: 1038 YSWGLGE-EGQLGHNDMETLNTPKMIEYFSQQAKQIKYISCGHSHSAAISEEGDLYTWG 1095
>gi|89243623|gb|AAI13827.1| RCCD1 protein [Homo sapiens]
Length = 244
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 61/137 (44%), Gaps = 19/137 (13%)
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AA GW H V V+E G++Y WGW E A TR+ G E
Sbjct: 84 AAGGW-HSVCVSETGDIYIWGWNESGQLALPTRNLAEDG---------------ETVARE 127
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
E+ + ++T A + + P + F P L+ L G K + G RHT +++
Sbjct: 128 ATELNEDGSQVKRTGGAEDGAPAPFIAVQPF---PALLDLPMGSDAVKASCGSRHTAVVT 184
Query: 229 DMGQVWGWGYGGEGQLG 245
G+++ WG+G GQLG
Sbjct: 185 RTGELYTWGWGKYGQLG 201
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 29/141 (20%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L PT +L
Sbjct: 67 LEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL-------PTRNLAE 119
Query: 261 CLEHAAS-----GKDRPLLVRQGSVNSSGKA----------------GRSYVKEIACGGR 299
E A +D + R G A G VK +CG R
Sbjct: 120 DGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVK-ASCGSR 178
Query: 300 HSAVVTDAGALLTFGWGLYGQ 320
H+AVVT G L T+GWG YGQ
Sbjct: 179 HTAVVTRTGELYTWGWGKYGQ 199
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP + VKA+ G H VT GE+YTWGW
Sbjct: 156 QPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGW 194
>gi|4557445|ref|NP_001259.1| RCC1 and BTB domain-containing protein 2 [Homo sapiens]
gi|197099869|ref|NP_001125174.1| RCC1 and BTB domain-containing protein 2 isoform 1 [Pongo abelii]
gi|332241903|ref|XP_003270124.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Nomascus leucogenys]
gi|397480404|ref|XP_003811474.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Pan
paniscus]
gi|426375447|ref|XP_004054550.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 1
[Gorilla gorilla gorilla]
gi|74739686|sp|O95199.1|RCBT2_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; Short=CHC1-L;
AltName: Full=RCC1-like G exchanging factor; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|75042250|sp|Q5RCZ7.1|RCBT2_PONAB RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|3789799|gb|AAC79987.1| RCC1-like G exchanging factor RLG [Homo sapiens]
gi|20810515|gb|AAH29052.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Homo sapiens]
gi|32891797|gb|AAP88928.1| chromosome condensation 1-like [Homo sapiens]
gi|55727208|emb|CAH90360.1| hypothetical protein [Pongo abelii]
gi|119629204|gb|EAX08799.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Homo sapiens]
gi|123979830|gb|ABM81744.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|124000595|gb|ABM87806.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|189055081|dbj|BAG38065.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 106/284 (37%), Gaps = 90/284 (31%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL + K C G G LAT+E G++ TWG S L +G P
Sbjct: 89 PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 144
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG+ +++G+
Sbjct: 145 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY---------------------NNSGQ 183
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
+ T P + RR T + + +
Sbjct: 184 VGSGSTVNQP----------IPRRVTGCLQNKV------------------------VVT 209
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
+A G + + D G+V+ WGY G GQLGLG+ PT PC A G +R
Sbjct: 210 IACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ-PT----PCRVAALQG------IR 258
Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 259 --------------VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 288
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
+PC V G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 247 TPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 176 WGYNNSGQ 183
>gi|224118018|ref|XP_002331537.1| predicted protein [Populus trichocarpa]
gi|222873761|gb|EEF10892.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 99/264 (37%), Gaps = 53/264 (20%)
Query: 93 ETPEPFPL--PTEASVVKAAAGWAHCVSVTEAGEVYTWGW------------RECVPSAK 138
E P P P SV A G H ++T G ++TWG+ RE P +
Sbjct: 15 ENPAFLPTLNPFLDSVRSIALGGVHSAAITSLGHIFTWGYGGFGALGHSVYHRELFP--R 72
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
+ ++G +A TE +GE R+ R +E
Sbjct: 73 LVEGSWDGKIRCISTSGTHTAAVTE--------SGEVYTWGREEGDGRLGLGPGRGPNEG 124
Query: 199 FTLS-PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KM 252
LS PC V P V + V GG T++L++ GQ+W WG +LG G ++ K
Sbjct: 125 GGLSIPCKVKTLP-VPVATVYCGGFFTMVLTEEGQIWNWGANSNYELGRGDKVGGWRPKP 183
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR----------------------SY 290
+P+ ++ A G L +G V S G G +
Sbjct: 184 IPSLEDARIIQIAGGGYHCLALTDEGKVLSWGFGGHGQLGHSSIQSQKIPAVIDALADQH 243
Query: 291 VKEIACGGRHSAVVTDAGALLTFG 314
V IACGG SA +TD G L +G
Sbjct: 244 VIYIACGGSSSAAITDKGKLYMWG 267
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
CGG F + +E G++ WG A+ + G P+P P +A +++ A G H
Sbjct: 145 CGGF--FTMVLTEEGQIWNWG-ANSNYELGRGDKVGGWRPKPIPSLEDARIIQIAGGGYH 201
Query: 116 CVSVTEAGEVYTWGW 130
C+++T+ G+V +WG+
Sbjct: 202 CLALTDEGKVLSWGF 216
>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
carolinensis]
Length = 4839
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 25/112 (22%)
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
N VK V +GGRH + L+ G+V+ WG G +G+LG SR+
Sbjct: 3048 NYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNC---------------- 3091
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
D+P L+ + K R +++IACG HSA +T +G L ++G G YG+
Sbjct: 3092 -DKPRLIE------ALKTKR--IRDIACGSSHSAAITSSGELYSWGLGEYGR 3134
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4032 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4082
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V +IA GG HSA +T AG L T+G G Y
Sbjct: 4083 PC--------DRPRVI---------ESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRY 4125
Query: 319 GQ 320
G+
Sbjct: 4126 GR 4127
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 55/122 (45%), Gaps = 23/122 (18%)
Query: 201 LSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
L P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P +
Sbjct: 483 LGPQLVQSLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPL-EEPKM 541
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
I L SGK +V IACG +SA +T G L T+G G Y
Sbjct: 542 ISAL--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNY 581
Query: 319 GQ 320
G+
Sbjct: 582 GR 583
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ ++ K G A+A + GK+ +WG DD G+ S + + P
Sbjct: 3038 PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3096
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+Y+WG E +G G D+T
Sbjct: 3097 IEALKTKRIRDIACGSSHSAAITSSGELYSWGLGE----------YGRLG--HGDNT--- 3141
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3142 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3194
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG G+ + V P
Sbjct: 3195 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH-VRKPQ 3253
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ + +A G H VTD G + +G
Sbjct: 3254 VV-----------------------EGLRGKKII-HVAVGALHCLAVTDTGQVYAWGDND 3289
Query: 318 YGQR 321
+GQ+
Sbjct: 3290 HGQQ 3293
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
D+ CG F++A ++ G++ +WG D++ + T +H P+ V+ A
Sbjct: 659 DIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGEKVIDVVA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EVY+WG
Sbjct: 718 GSTHCLALTEDSEVYSWG 735
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4210 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4268
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4269 CTEDGEVYTWG 4279
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 108/280 (38%), Gaps = 61/280 (21%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
GG A + GK+ G A T+G+ G + P+P + + VVK
Sbjct: 3002 AGGSKSLFAVTVEGKVYACGEA--------TNGRLGLGLSSGTVPIPRQITALSNYVVKK 3053
Query: 110 AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
A G H +++T G+V++WG D G G F + + K + +
Sbjct: 3054 VAVHSGGRHAMALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3103
Query: 167 PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
A TSS E GD L P +V + G ++ +VA G
Sbjct: 3104 RIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3163
Query: 221 GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
R TL L+D G V+ WG G G+LG G + G + P + +
Sbjct: 3164 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 3205
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+N G V +I CG + S +T +G + T+G G Y
Sbjct: 3206 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDY 3238
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 92/230 (40%), Gaps = 26/230 (11%)
Query: 46 LCGGDSWKDVCGGGCG--FALATSESGKLITWG----------SADDEGQSYLTSGKHGE 93
L G + K V CG ++ A + G+L TWG S++D+ L +G G
Sbjct: 545 LSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKG- 603
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
+ V +G A ++VTE G+V++WG + K+ R GS G
Sbjct: 604 --------LKVIDVSCGSGDAQTLAVTENGQVWSWGDGD---YGKLGRG-GSDGCKTPKL 651
Query: 154 TGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK 213
K L + + + + S + +++ G E P L+ G K
Sbjct: 652 IEKLQDLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEK 711
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
+ V AG H L L++ +V+ WG + Q RI P P +P L+
Sbjct: 712 VIDVVAGSTHCLALTEDSEVYSWGSNDQCQHFDTLRITK-PDPTALPGLD 760
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 28/122 (22%)
Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
P LVT G+K+ V+ +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 595 PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 653
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
L+ + +++CG + S +T G + ++G G Q
Sbjct: 654 KLQDLD------------------------IVKVSCGSQFSVALTKDGQVYSWGKG-DNQ 688
Query: 321 RM 322
R+
Sbjct: 689 RL 690
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3244 GTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT 3297
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 15/84 (17%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----S 105
K G LA S G++ +WG A+D GK G +P P E+
Sbjct: 4046 KVAVNSGGKHCLALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIE 4097
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
VV AAG AH +T AG++YTWG
Sbjct: 4098 VVDIAAGGAHSACITAAGDLYTWG 4121
>gi|198435272|ref|XP_002131982.1| PREDICTED: similar to Wu:fc44f06 protein [Ciona intestinalis]
Length = 373
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L+ GV I +V AGG H+ L+D ++ WG+ GQ G + + + L
Sbjct: 197 PQLIDALGGVCIKRVGAGGWHSAALADTDDLYVWGWNQSGQTGFQAPVGICTNS--TEAL 254
Query: 263 EHAASGKDR---------PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
+ S KD LL + +S+ + +++CG RH+A VT G L+T+
Sbjct: 255 KMENSTKDSNAIGVVLNPTLLELEMCADSNSFVS---IIDVSCGVRHTAAVTSCGTLITW 311
Query: 314 GWGLYGQRMAKCLAGD 329
GW YGQ C D
Sbjct: 312 GWARYGQICHSCCKPD 327
>gi|410907970|ref|XP_003967464.1| PREDICTED: RCC1 domain-containing protein 1-like [Takifugu
rubripes]
Length = 308
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 45/207 (21%)
Query: 63 ALATSESGKLITWG--SADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAGWAH 115
+ S +G + TWG S G LTS E P EA V A GW H
Sbjct: 107 VMLLSATGAVYTWGLGSHGQLGHGVLTS-------EEKPRAVEALWGMPMVCVATGGW-H 158
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V +++ G++Y WGW E +G S + LP + +P +AG
Sbjct: 159 SVCISDGGDLYVWGWNE-------------SGQLGLPSRSLRKTLPQQSSP----KAG-- 199
Query: 176 VVKRRKTSSAREESENPASGDEFFT---LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
SS+ EE++ +E F P L+ ++P +I V+ G RHT ++ G
Sbjct: 200 -------SSSTEETQEGDKHEEVFISIQAFPALLDVSPSCEIMAVSCGSRHTAAVTTTGD 252
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLI 259
++ G+G GQLG +K P L+
Sbjct: 253 LYTCGWGDYGQLG-HPTLKSTDEPQLV 278
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G+ + VA GG H++ +SD G ++ WG+ GQLGL SR P ++S ++
Sbjct: 146 GMPMVCVATGGWHSVCISDGGDLYVWGWNESGQLGLPSRSLRKTLPQQSSPKAGSSSTEE 205
Query: 271 RPLLVRQGSVNSSGKAGRSY--------VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ V S +A + + ++CG RH+A VT G L T GWG YGQ
Sbjct: 206 TQEGDKHEEVFISIQAFPALLDVSPSCEIMAVSCGSRHTAAVTTTGDLYTCGWGDYGQ 263
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 62/154 (40%), Gaps = 26/154 (16%)
Query: 168 SDKRAGEEVVKRRKTSSAREESENPA-SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
SD+ ++ K KT + P G T +P +L+P +K VA H ++
Sbjct: 50 SDRLESWDLQKVEKTPTWNSPLNLPLLPGGYIATKAPLYRSLSPHLKAKSVAVSAEHVML 109
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
LS G V+ WG G GQLG G + +++P V
Sbjct: 110 LSATGAVYTWGLGSHGQLGHG-----------------VLTSEEKPRAVE-------ALW 145
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G V +A GG HS ++D G L +GW GQ
Sbjct: 146 GMPMVC-VATGGWHSVCISDGGDLYVWGWNESGQ 178
>gi|219847606|ref|YP_002462039.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541865|gb|ACL23603.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 784
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 125/329 (37%), Gaps = 42/329 (12%)
Query: 22 VYMWGY-LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
V+ WGY G + S P + G S G A + SG ++ WG +
Sbjct: 81 VWCWGYNWSGQLGDGSYTDRSTPVAVSGLPSGVTAIAAGGAHTCALTSSGGVMCWG-GNY 139
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKA-AAGWAHCVSVTEAGEVYTWGWRECVPSAKV 139
GQ L G + + P + S V A AAG AH ++ +G V+ WG+ +
Sbjct: 140 FGQ--LGDGSYTDRSTPVAVSGLPSGVTAIAAGGAHTCALMSSGGVWCWGY-------NL 190
Query: 140 TRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF 199
+ G + + S LP+E + A + ++ GD F
Sbjct: 191 SGQLGDGSTIYHITPVAVSGLPSEVTAIAAGYAHTCALTGSGGVWCWGDNGFGQLGDGSF 250
Query: 200 TLS--PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
T S P V P +T +AAGGR+T L+ G VW WG GQLG GS TP
Sbjct: 251 TDSSTPAAVGGLP-SGVTAIAAGGRYTCALTSSGGVWCWGRNDSGQLGDGSFTNR-STPG 308
Query: 258 LIPCLEH-----AASGKDRPLLVRQGSV-----NSSGKAGR----------------SYV 291
+ L AA G L G V N SG+ G S V
Sbjct: 309 AVGGLPSGVTAIAAGGAHTCALTSSGGVWCWGGNDSGQLGDGSYTDRSTPGAVSGLPSGV 368
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
IA GG H+ T +G + +G YGQ
Sbjct: 369 TAIAAGGAHTCARTSSGGVWCWGGNFYGQ 397
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 58/140 (41%), Gaps = 27/140 (19%)
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH-- 264
+ +P +T +AAG HT L+ G+VW WGY GQLG GS TP + L
Sbjct: 55 SFSPLQGVTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDR-STPVAVSGLPSGV 113
Query: 265 ---AASGKDRPLLVRQGSV-----NSSGKAGR----------------SYVKEIACGGRH 300
AA G L G V N G+ G S V IA GG H
Sbjct: 114 TAIAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPVAVSGLPSGVTAIAAGGAH 173
Query: 301 SAVVTDAGALLTFGWGLYGQ 320
+ + +G + +G+ L GQ
Sbjct: 174 TCALMSSGGVWCWGYNLSGQ 193
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 76/198 (38%), Gaps = 30/198 (15%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA-AAGWAHCVSVTEAG 123
A + SG + WG +D GQ L G + + P + S V A AAG AH + T +G
Sbjct: 329 ALTSSGGVWCWG-GNDSGQ--LGDGSYTDRSTPGAVSGLPSGVTAIAAGGAHTCARTSSG 385
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
V+ WG G + + + G S LP+ + +
Sbjct: 386 GVWCWG-------GNFYGQLGDGTTTDRSTPGAVSGLPSGV---------TAIAAGNYHT 429
Query: 184 SAREESENP-ASGDEFFTLSPCLVTLN---PGV------KITKVAAGGRHTLILSDMGQV 233
A S+ GD F+ T N PG +T +AAG HT L+ G V
Sbjct: 430 CALTGSDGVWCWGDNFYGQLGDGTTTNRSTPGAVSGLPSGVTAIAAGNYHTCALTSSGGV 489
Query: 234 WGWGYGGEGQLGLGSRIK 251
W WG GQLG G+
Sbjct: 490 WCWGRNDSGQLGDGTTTN 507
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 43/107 (40%), Gaps = 26/107 (24%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
+T +AAG HT L+ G VW WGY GQLG G+ TP + L
Sbjct: 623 VTAIAAGNYHTCALTSSGGVWCWGYNLSGQLGDGTTTNR-STPGAVSGLP---------- 671
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
S V IA G H+ +T +G + +G YGQ
Sbjct: 672 ---------------SGVTAIAAGDEHTCALTGSGGVWCWGDNYYGQ 703
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 87/246 (35%), Gaps = 43/246 (17%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
V AAG H ++T + V+ WG G + + + G S LP+
Sbjct: 419 VTAIAAGNYHTCALTGSDGVWCWG-------DNFYGQLGDGTTTNRSTPGAVSGLPSGV- 470
Query: 166 PPSDKRAGEEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
+ AG +S R +S G +P V P +T +AAG
Sbjct: 471 --TAIAAGNYHTCALTSSGGVWCWGRNDSGQLGDGTTTNRSTPGAVGGLP-SGVTAIAAG 527
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI---PCLEHAASGKDRPLLVRQ 277
HT L G VW WG GQLG GS TP + P A + +
Sbjct: 528 DYHTCALMSSGGVWCWGLNNRGQLGDGSYTDS-STPVAVGGLPSGVMAIAAGNYHTCALT 586
Query: 278 GS-------VNSSGKAGR----------------SYVKEIACGGRHSAVVTDAGALLTFG 314
GS NS G+ G S V IA G H+ +T +G + +G
Sbjct: 587 GSDGVWCWGTNSDGQLGDGTTTNRSTPVAVSGLPSGVTAIAAGNYHTCALTSSGGVWCWG 646
Query: 315 WGLYGQ 320
+ L GQ
Sbjct: 647 YNLSGQ 652
>gi|449481389|ref|XP_004156168.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Cucumis sativus]
Length = 485
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 93/239 (38%), Gaps = 43/239 (17%)
Query: 95 PEPFPLPTEASV--VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
P+ F P E + + A G H +V G ++TWG DFG G D
Sbjct: 49 PDLFGCPGEINSRWLDIACGREHTAAVASDGSLFTWG----------ANDFGQLG----D 94
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS---------GDEFFTLSP 203
T ++S LP + + T++ E EN + G + P
Sbjct: 95 GTEEKSKLPKKVNQLQGEFVKSVSCGAHCTAAIAEPRENDGTLSTRRLWIWGQNQGSNFP 154
Query: 204 CLV--TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
L P I +V+ G H + LSD GQ+ WGY GQLG G + + +I
Sbjct: 155 RLFWGAFTPQTIIRQVSCGAVHVVALSDDGQLQAWGYNEYGQLGRGVTSEGLQGARIINA 214
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
A + P LV + +++CG HSA +++ G + T+G G GQ
Sbjct: 215 F--AKFLDEAPELVT--------------ITKVSCGEYHSAAISENGEVYTWGLGSMGQ 257
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 134/352 (38%), Gaps = 91/352 (25%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALA-------TSESGKLITWG 76
+G L + EKS + P G+ K V CG C A+A T + +L WG
Sbjct: 89 FGQLGDGTEEKSKL--PKKVNQLQGEFVKSVSCGAHCTAAIAEPRENDGTLSTRRLWIWG 146
Query: 77 SADDEGQSYLTSGKHGETPEPF--PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
++G ++ P F + + + + G H V++++ G++ WG+ E
Sbjct: 147 Q--NQGSNF---------PRLFWGAFTPQTIIRQVSCGAVHVVALSDDGQLQAWGYNE-- 193
Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS 194
++ R S G Q A ++AP E+V K S S +
Sbjct: 194 -YGQLGRGVTSEG-LQGARIINAFAKFLDEAP--------ELVTITKVSCGEYHSAAISE 243
Query: 195 GDEFFT--------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
E +T L P V G+ + +A GG HT ++ G ++
Sbjct: 244 NGEVYTWGLGSMGQLGHCSLQSADKELIPRRVVALDGICVKDIACGGVHTCAITQNGSLY 303
Query: 235 GWGYGGEG------QLGLGSRI--------KMVPTPHLIPCLEHAASGKDRPLL-VRQGS 279
WG G G Q G S I + +P + ++H A G L+ + G
Sbjct: 304 AWGGGQVGQLGVGPQTGFFSCIAGDSETFLRNLPVVVVSDGVQHVACGHSHTLVSTKDGR 363
Query: 280 V-----NSSGKAGR---SY-------------VKEIACGGRHSAVVTDAGAL 310
+ NS G+A +Y V+++A GG HSAV+TDA +L
Sbjct: 364 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTDACSL 415
>gi|395521023|ref|XP_003764621.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Sarcophilus
harrisii]
Length = 552
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 96/241 (39%), Gaps = 43/241 (17%)
Query: 38 ILSPIPAR----LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG--KH 91
IL I R LCG G G +AT E G++ TWG + L +G H
Sbjct: 84 ILHSIEPRRVDHLCGKKIACLSYGSGPHVVIATDE-GEVYTWGH---NAYNQLGNGTTNH 139
Query: 92 GETPEPFPLPT-EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
G P V++ A G H + +T GEV+ WG+ ++G
Sbjct: 140 GLVPTHISTNLGNRKVIEVACGSHHSLVLTSDGEVFAWGYN-------------NSGQVG 186
Query: 151 KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--------------ASGD 196
ST Q +P + + + + S A ES +SG+
Sbjct: 187 SGSTANQ-PIPRKVTGCLQNKIATTIACGQMCSMAVVESGEVYVWGYNGNGQLGLGSSGN 245
Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPT 255
+ +PC + G+++ K+ G HTL+L+D G ++ WG GQLG G++ PT
Sbjct: 246 Q---PTPCRIAALQGIRVHKIVCGYAHTLVLTDEGHLYAWGANSYGQLGTGNKSNQSYPT 302
Query: 256 P 256
P
Sbjct: 303 P 303
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 69/150 (46%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGV-KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L P ++ N G K+ +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 141 LVPTHISTNLGNRKVIEVACGSHHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRKV 199
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 200 TGCLQNKIATTIACGQMCSMAVVESGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 259
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V +I CG H+ V+TD G L +G YGQ
Sbjct: 260 VHKIVCGYAHTLVLTDEGHLYAWGANSYGQ 289
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 57/129 (44%), Gaps = 27/129 (20%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD ++ P V G KI ++ G G H +I +D G+V+ WG+ QLG G+
Sbjct: 81 TGDILHSIEPRRVDHLCGKKIACLSYGSGPHVVIATDEGEVYTWGHNAYNQLGNGT---- 136
Query: 253 VPTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
T H L+P + S G V E+ACG HS V+T G +
Sbjct: 137 --TNHGLVP-------------------THISTNLGNRKVIEVACGSHHSLVLTSDGEVF 175
Query: 312 TFGWGLYGQ 320
+G+ GQ
Sbjct: 176 AWGYNNSGQ 184
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 69/175 (39%), Gaps = 26/175 (14%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP ++ G K CG ++A ESG++ WG
Sbjct: 174 VFAWGYNNSGQVGSGSTANQPIPRKVTGCLQNKIATTIACGQMCSMAVVESGEVYVWGY- 232
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
G L G G P P + V K G+AH + +T+ G +Y WG
Sbjct: 233 --NGNGQLGLGSSGNQPTPCRIAALQGIRVHKIVCGYAHTLVLTDEGHLYAWG------- 283
Query: 137 AKVTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
A S+ + TG +S + PT + D+ TS+A+ +S
Sbjct: 284 ---------ANSYGQLGTGNKSNQSYPTPVSVEKDRVIEIAACHSAHTSAAKTQS 329
>gi|193785714|dbj|BAG51149.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 106/284 (37%), Gaps = 90/284 (31%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL + K C G G LAT+E G++ TWG S L +G P
Sbjct: 89 PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 144
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG+ +++G+
Sbjct: 145 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY---------------------NNSGQ 183
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
+ T P + RR T + + +
Sbjct: 184 VGSGSTVNQP----------IPRRVTGCLQNKV------------------------VVT 209
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
+A G + + D G+V+ WGY G GQLGLG+ PT PC A G +R
Sbjct: 210 IACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ-PT----PCRVAALQG------IR 258
Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG H+ V+TD G + +G YGQ
Sbjct: 259 --------------VQRVACGYAHTLVLTDEGQVYAWGANSYGQ 288
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
+PC V G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 247 TPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 27/128 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
T H L+PC S N S K V E+ACG HS V+T G +
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLTSDGEVFA 175
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 176 WGYNNSGQ 183
>gi|5823976|emb|CAB54002.1| RPGR protein [Homo sapiens]
gi|119579848|gb|EAW59444.1| retinitis pigmentosa GTPase regulator, isoform CRA_d [Homo sapiens]
Length = 646
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 26/119 (21%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P LV+ P K+ +VA GG HT++L++ V+ +G G GQLGLG+ + P +I
Sbjct: 234 TPQLVSEIPE-KVIQVACGGEHTVVLTE-NAVYTFGLGQFGQLGLGTFLFETSEPKVIEN 291
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +D+ + SY I+CG H+A++TD G + TFG G +G+
Sbjct: 292 I------RDQTI---------------SY---ISCGENHTALITDIGLMYTFGDGRHGK 326
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 54/139 (38%), Gaps = 31/139 (22%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
C+ L P K+ A G HTL+ ++ G V+ G EGQLGLG I +
Sbjct: 80 CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
H I L +A L G + NS G+ G V I+
Sbjct: 139 EHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWIS 196
Query: 296 CGGRHSAVVTDAGALLTFG 314
CG HSA VT G L FG
Sbjct: 197 CGYYHSAFVTTDGELYVFG 215
>gi|307214559|gb|EFN89544.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
Length = 346
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 57/119 (47%), Gaps = 25/119 (21%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P LV + VK +A+G HT++L++ G V+ G G GQLG + ++ P LI
Sbjct: 151 APVLVEVPKRVKFVDIASGFDHTILLAENGDVYSMGMGTRGQLG-HNDLEDCDNPRLIEA 209
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
L AG V +I+ GG HSAVVTD G L T+GW G+
Sbjct: 210 L-----------------------AGLRIV-QISAGGWHSAVVTDQGDLYTWGWNTSGE 244
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 17/119 (14%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P L+ G++I +++AGG H+ +++D G ++ WG+ G+LG S+ V H +P
Sbjct: 203 NPRLIEALAGLRIVQISAGGWHSAVVTDQGDLYTWGWNTSGELGTESKDTKV---HAVPT 259
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
L S + G+ VK + CG + ++D G+ G YGQ
Sbjct: 260 LIDLKSNE--------------GEDTEVNVKSVECGNSFTICLSDDGSFWGCGNNKYGQ 304
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 78/211 (36%), Gaps = 54/211 (25%)
Query: 35 KSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET 94
+P+L +P R+ D G + +E+G + + G GQ + +
Sbjct: 150 NAPVLVEVPKRVKFVD-----IASGFDHTILLAENGDVYSMGMGT-RGQLGHNDLEDCDN 203
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST 154
P +V+ +AG H VT+ G++YTWGW G G+ KD+
Sbjct: 204 PRLIEALAGLRIVQISAGGWHSAVVTDQGDLYTWGWNTS----------GELGTESKDT- 252
Query: 155 GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
K A+PT ++ + S+ E++E V +
Sbjct: 253 -KVHAVPT-------------LIDLK--SNEGEDTE---------------------VNV 275
Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
V G T+ LSD G WG G GQLG
Sbjct: 276 KSVECGNSFTICLSDDGSFWGCGNNKYGQLG 306
>gi|421871589|ref|ZP_16303210.1| regulator of chromosome condensation family protein [Brevibacillus
laterosporus GI-9]
gi|372459473|emb|CCF12759.1| regulator of chromosome condensation family protein [Brevibacillus
laterosporus GI-9]
Length = 392
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 14/221 (6%)
Query: 36 SPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
+ + SP+ + ++ + + G +I +G+ D +S G+T
Sbjct: 16 ASLFSPVASHAQDSFNYDHLLSADNNRTFMVKKDGSVI-YGTGSDANGGLGSSSVKGKTT 74
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
P P+ + V+ G +H V++ + G V+TWGW +G G+ + ST
Sbjct: 75 SPVPVDDLSDVLMVDTGTSHTVALQKDGTVWTWGWSA----------YGELGNEKAKSTE 124
Query: 156 KQSALPTEQAPPSDKRAGEEV---VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
K + RAGE +K T A ++ + GD V ++
Sbjct: 125 KTPHHVKWLSDVKQVRAGENFTLALKEDGTVWAFGKNRSGQLGDGTTETRVKPVQVSGLT 184
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
I + AG +L LS+ G VW WG GQLG G+R K +
Sbjct: 185 DIVAIDAGEEFSLALSEDGTVWAWGNNSVGQLGNGTREKAL 225
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 35/208 (16%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
F+LA SE G + WG+ + GQ L +G + +P + V+ + G +VT
Sbjct: 195 FSLALSEDGTVWAWGN-NSVGQ--LGNGTREKALQPVQVSELTDVIAISTGEKQGYAVTS 251
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
G+VY WG+ + G G D T K S P D A + ++
Sbjct: 252 NGDVYGWGYNQ-----------GKLG----DGTKKSSNSPVLIDGIYDVIAVDS--GKQH 294
Query: 182 TSSAREESENPASGDEF-----------FTLSPCLVTLN---PGVKITKVAAGGRHTLIL 227
T + +E+ A G ++++P V L P +I + AGG H+ +
Sbjct: 295 TLALKEDGTVWAWGTNTHGQLGYGTPVNYSMTPNQVFLESTEPLNQIVAIDAGGFHSHAI 354
Query: 228 SDMGQVWGWGYGGEGQLGLG-SRIKMVP 254
G VW WG+ G+LGLG S+ +M P
Sbjct: 355 KKDGTVWSWGFNSNGELGLGHSKKQMYP 382
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 99/263 (37%), Gaps = 35/263 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F LA E G + +G + GQ L G +P + +V AG ++
Sbjct: 142 GENFTLALKEDGTVWAFGK-NRSGQ--LGDGTTETRVKPVQVSGLTDIVAIDAGEEFSLA 198
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
++E G V+ WG TR+ + + S L A + ++ G V
Sbjct: 199 LSEDGTVWAWGNNSVGQLGNGTRE-------KALQPVQVSELTDVIAISTGEKQGYAVTS 251
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGV-KITKVAAGGRHTLILSDMGQVWGWG 237
G + + SP L+ G+ + V +G +HTL L + G VW WG
Sbjct: 252 NGDVYGWGYNQGKLGDGTKKSSNSPVLI---DGIYDVIAVDSGKQHTLALKEDGTVWAWG 308
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
GQLG G+ + TP+ + LE PL + + I G
Sbjct: 309 TNTHGQLGYGTPVNYSMTPNQV-FLEST-----EPL---------------NQIVAIDAG 347
Query: 298 GRHSAVVTDAGALLTFGWGLYGQ 320
G HS + G + ++G+ G+
Sbjct: 348 GFHSHAIKKDGTVWSWGFNSNGE 370
>gi|339010099|ref|ZP_08642670.1| copper amine oxidase domain protein [Brevibacillus laterosporus LMG
15441]
gi|338773369|gb|EGP32901.1| copper amine oxidase domain protein [Brevibacillus laterosporus LMG
15441]
Length = 392
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 14/221 (6%)
Query: 36 SPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
+ + SP+ + ++ + + G +I +G+ D +S G+T
Sbjct: 16 ASLFSPVASHAQDSFNYDHLLSADNNRTFMVKKDGSVI-YGTGSDANGVLGSSSVKGKTT 74
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
P P+ + V+ G +H V++ + G V+TWGW +G G+ + ST
Sbjct: 75 SPVPVDDLSDVLMVDTGTSHTVALQKDGTVWTWGWSA----------YGELGNEKAKSTE 124
Query: 156 KQSALPTEQAPPSDKRAGEEV---VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
K + RAGE +K T A ++ + GD V ++
Sbjct: 125 KTPHHVKWLSDVKQVRAGENFTLALKEDGTVWAFGKNRSGQLGDGTTETRVKPVQVSGLT 184
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
I + AG +L LS+ G VW WG GQLG G+R K +
Sbjct: 185 DIVAIDAGEEFSLALSEDGTVWAWGNNSVGQLGNGTREKAL 225
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 35/208 (16%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
F+LA SE G + WG+ + GQ L +G + +P + V+ + G +VT
Sbjct: 195 FSLALSEDGTVWAWGN-NSVGQ--LGNGTREKALQPVQVSELTDVIAISTGEKQGYAVTS 251
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
G+VY WG+ + G G D T K P D A + ++
Sbjct: 252 NGDVYGWGYNQ-----------GKLG----DGTNKSRNSPVLIDGIYDVIAVDS--GKQH 294
Query: 182 TSSAREESENPASGDEF-----------FTLSPCLVTLN---PGVKITKVAAGGRHTLIL 227
T + +E+ A G ++++P V L P +I + AGG H+ +
Sbjct: 295 TLALKEDGTVWAWGTNTHGQLGYGTPVNYSMTPNQVFLESTEPLNQIVAIDAGGFHSHAI 354
Query: 228 SDMGQVWGWGYGGEGQLGLG-SRIKMVP 254
G VW WG+ G+LGLG S+ +M P
Sbjct: 355 KKDGTVWSWGFNSNGELGLGHSKKQMYP 382
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 97/263 (36%), Gaps = 35/263 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F LA E G + +G + GQ L G +P + +V AG ++
Sbjct: 142 GENFTLALKEDGTVWAFGK-NRSGQ--LGDGTTETRVKPVQVSGLTDIVAIDAGEEFSLA 198
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
++E G V+ WG TR+ + + S L A + ++ G V
Sbjct: 199 LSEDGTVWAWGNNSVGQLGNGTRE-------KALQPVQVSELTDVIAISTGEKQGYAVTS 251
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGV-KITKVAAGGRHTLILSDMGQVWGWG 237
G SP L+ G+ + V +G +HTL L + G VW WG
Sbjct: 252 NGDVYGWGYNQGKLGDGTNKSRNSPVLI---DGIYDVIAVDSGKQHTLALKEDGTVWAWG 308
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
GQLG G+ + TP+ + LE PL + + I G
Sbjct: 309 TNTHGQLGYGTPVNYSMTPNQV-FLEST-----EPL---------------NQIVAIDAG 347
Query: 298 GRHSAVVTDAGALLTFGWGLYGQ 320
G HS + G + ++G+ G+
Sbjct: 348 GFHSHAIKKDGTVWSWGFNSNGE 370
>gi|428176135|gb|EKX45021.1| hypothetical protein GUITHDRAFT_71654 [Guillardia theta CCMP2712]
Length = 364
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 101/260 (38%), Gaps = 49/260 (18%)
Query: 68 ESGKLITW--GSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEV 125
+G+ TW G+ D + + T H E E PL + A G AH V TE G+V
Sbjct: 42 RAGETRTWICGNLDHKSSRFSTCVSH-ELRELLPLRG-VRINSLACGRAHAVLTTEEGDV 99
Query: 126 YTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRA--GEEVVKRRKT 182
+++GW +G G Q D T L + + P A G+ V
Sbjct: 100 WSFGWNM----------YGQLGLGLQYDHTRTPQLLESLRGPKLQDVACGGQHAVVMLSD 149
Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGV------KITKVAAGGRHTLILSDMGQVWGW 236
S N +L P L+ ++ ++A G HT L+ G+V+
Sbjct: 150 GSLFAWGRNEEGQLAIGSLEPKLIPSRVETPWRGEERVVQLACGFSHTAFLTSSGRVFCS 209
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G G GQLG+GS+ + P L+ +E R++V + C
Sbjct: 210 GQGDSGQLGIGSKSNSL-VPALVLGIE------------------------RAHVGSLVC 244
Query: 297 GGRHSAVVTDAGALLTFGWG 316
G H+ VV DA A + F WG
Sbjct: 245 GHSHTMVV-DANAQMAFSWG 263
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 30/140 (21%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL------EH 264
GV+I +A G H ++ ++ G VW +G+ GQLGLG + TP L+ L +
Sbjct: 77 GVRINSLACGRAHAVLTTEEGDVWSFGWNMYGQLGLGLQYDHTRTPQLLESLRGPKLQDV 136
Query: 265 AASGKDRPLLVRQGSVNSSGKA------------------------GRSYVKEIACGGRH 300
A G+ +++ GS+ + G+ G V ++ACG H
Sbjct: 137 ACGGQHAVVMLSDGSLFAWGRNEEGQLAIGSLEPKLIPSRVETPWRGEERVVQLACGFSH 196
Query: 301 SAVVTDAGALLTFGWGLYGQ 320
+A +T +G + G G GQ
Sbjct: 197 TAFLTSSGRVFCSGQGDSGQ 216
>gi|224496032|ref|NP_001139103.1| probable E3 ubiquitin-protein ligase HERC4-like [Danio rerio]
Length = 992
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 28/136 (20%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP-HL-----IPCLEHAA 266
++ ++A G +H++ LS+ GQ++ WG GQLGL +P HL IP + +A
Sbjct: 116 QVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQISA 175
Query: 267 SGKDRPLLVRQGSV-----NSSGKAGRSYVKE-----------------IACGGRHSAVV 304
G +L G V NS+G+ G K+ I+CGG H+A +
Sbjct: 176 GGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGEHTATL 235
Query: 305 TDAGALLTFGWGLYGQ 320
+ G + TFG G +GQ
Sbjct: 236 SKGGTVFTFGSGGFGQ 251
>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis niloticus]
Length = 4833
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 25/112 (22%)
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
N +K V +GGRH + L+ G+V+ WG G +G+LG SR+
Sbjct: 3041 NYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNC---------------- 3084
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
D+P L+ + K R +++IACG HSA +T +G L ++G G YG+
Sbjct: 3085 -DKPRLIE------ALKTKR--IRDIACGSSHSAAITSSGELYSWGLGEYGR 3127
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 60/123 (48%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P L+ + KI K+AA G+H L LS G+V+ WG G G+LG G + P
Sbjct: 472 TLAPMLIHVLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGD-TTYLEEPK 530
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I G+ N GK +V +ACG +SA +T G L T+G G
Sbjct: 531 MI------------------GTFN--GKQAGKHVVHVACGSTYSAAITADGELYTWGRGN 570
Query: 318 YGQ 320
YG+
Sbjct: 571 YGR 573
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4026 TPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4076
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V +IA GG HSA +T +G L T+G G Y
Sbjct: 4077 PC--------DRPRVI---------ESLRGVEVVDIAAGGAHSACITASGELFTWGKGRY 4119
Query: 319 GQ 320
G+
Sbjct: 4120 GR 4121
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 114/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ ++ K G A+A + GK+ +WG DD G+ S + + P
Sbjct: 3031 PIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3089
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+Y+WG E +G G D+T
Sbjct: 3090 IEALKTKRIRDIACGSSHSAAITSSGELYSWGLGE----------YGRLG--HGDNT--- 3134
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE F S
Sbjct: 3135 ----TQLRPKLVKVLLGHRVI---QVACGSRDAQTLALTDEGFVFSWGDGDFGKLGRGGS 3187
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG G+ + V P
Sbjct: 3188 EGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH-VRKPQ 3246
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD G + +G
Sbjct: 3247 MV-----------------------EGLRGKKIV-HVAVGALHCLAVTDTGQVYAWGDND 3282
Query: 318 YGQR 321
+GQ+
Sbjct: 3283 HGQQ 3286
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
D+ CG F++A ++ G++ TWG D++ + T +H P+ VV A
Sbjct: 649 DIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD-EHVRYPKLLDSLQGKKVVDVAV 707
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++T+ GEV +WG
Sbjct: 708 GSTHCLALTDDGEVLSWG 725
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4204 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4262
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4263 CTEDGEVYTWG 4273
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 108/280 (38%), Gaps = 61/280 (21%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
GG A + GK+ G A T+G+ G + P+P + + V+K
Sbjct: 2995 AGGSKSLFAVTVEGKIYACGEA--------TNGRLGLGLSSGTIPIPRQITALSNYVIKK 3046
Query: 110 AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
A G H +++T G+V++WG D G G F + + K + +
Sbjct: 3047 VAVHSGGRHAMALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3096
Query: 167 PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
A TSS E GD L P LV + G ++ +VA G
Sbjct: 3097 RIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACG 3156
Query: 221 GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
R TL L+D G V+ WG G G+LG G + G + P + +
Sbjct: 3157 SRDAQTLALTDEGFVFSWGDGDFGKLGRG-----------------GSEGCNVPQNIER- 3198
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+N G V +I CG + S +T +G + T+G G Y
Sbjct: 3199 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDY 3231
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAA 111
CG G LA +E+G++ +WG D Y G+ G +TP+ + +VK
Sbjct: 601 CGSGDAQTLAVTENGQVWSWGDGD-----YGKLGRGGSDGCKTPKLVEKLQDLDIVKVCC 655
Query: 112 GWAHCVSVTEAGEVYTWG 129
G V++T+ G+VYTWG
Sbjct: 656 GSQFSVALTKDGQVYTWG 673
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 28/123 (22%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P +VT G+K+ VA +G TL +++ GQVW WG G G+LG G
Sbjct: 584 TPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG------------ 631
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
+ G P LV K + ++ CG + S +T G + T+G G
Sbjct: 632 -----GSDGCKTPKLVE--------KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKG-DN 677
Query: 320 QRM 322
QR+
Sbjct: 678 QRL 680
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3237 GTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT 3290
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 31/138 (22%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-HAA--- 266
GV++ +AAGG H+ ++ G+++ WG G G+LG G + P L+ L+ H
Sbjct: 4089 GVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQL-KPKLVDALQGHRVIDV 4147
Query: 267 ---SGKDRPLLVRQGSV------NSSGKAGRS-----------------YVKEIACGGRH 300
SG + L + + GK GR V ++ CG +
Sbjct: 4148 ACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVVKVECGSQF 4207
Query: 301 SAVVTDAGALLTFGWGLY 318
S +T +GA+ T+G G Y
Sbjct: 4208 SVALTKSGAVYTWGKGDY 4225
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 15/84 (17%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----S 105
K G LA S G++ +WG A+D GK G +P P E+
Sbjct: 4040 KVAVNSGGKHCLALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGVE 4091
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
VV AAG AH +T +GE++TWG
Sbjct: 4092 VVDIAAGGAHSACITASGELFTWG 4115
>gi|301768835|ref|XP_002919849.1| PREDICTED: RCC1 domain-containing protein 1-like [Ailuropoda
melanoleuca]
Length = 296
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 24/155 (15%)
Query: 96 EPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQ 150
EP P EA + + AAG H V V+EAG++Y WGW E A TR G +
Sbjct: 118 EPEPRLLEALQGLPMAEVAAGGWHSVCVSEAGDIYIWGWNESGQLALPTRSLAEDGKTVA 177
Query: 151 KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNP 210
K+++G E + R+T+ A + + P + F P L+ L
Sbjct: 178 KEASG----------------LNEGGSEGRRTARAEDGAPAPFIALQPF---PALLDLPQ 218
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
+ + G RHT +++ G+++ WG+G GQLG
Sbjct: 219 DADAVQASCGSRHTAVVTRTGELYTWGWGKYGQLG 253
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 64/147 (43%), Gaps = 45/147 (30%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L +R
Sbjct: 121 PRLLEALQGLPMAEVAAGGWHSVCVSEAGDIYIWGWNESGQLALPTR------------- 167
Query: 263 EHAASGKDRPLLVRQGS-VNSSGKAGRSYVK----------------------------E 293
+ +D + ++ S +N G GR + +
Sbjct: 168 ---SLAEDGKTVAKEASGLNEGGSEGRRTARAEDGAPAPFIALQPFPALLDLPQDADAVQ 224
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQ 320
+CG RH+AVVT G L T+GWG YGQ
Sbjct: 225 ASCGSRHTAVVTRTGELYTWGWGKYGQ 251
>gi|281205292|gb|EFA79484.1| ankyrin repeat-containing protein [Polysphondylium pallidum PN500]
Length = 903
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 25/118 (21%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P +++ +IT++A G H+L L ++G V+ WG G G+LGLG+ ++V P +IP
Sbjct: 251 PSMISAFKNKQITQIACGKDHSLALDEIGVVYAWGNGSGGRLGLGNS-EVVSIPKIIPHF 309
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
E + IACG S ++D+G + ++G GL+G
Sbjct: 310 EDEK------------------------ITSIACGQEFSLALSDSGKVFSWGKGLHGN 343
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 14/81 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADD--------EGQSYLTSGKHGETPEPFPLPTEASVVK 108
G G F SES + TWGS + ++Y + +T P+P+ T
Sbjct: 418 GAGANFNAVLSESNAIYTWGSNIHCQLGVLLPDHRNYTGEPQVVKTLLPYPIST------ 471
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
G+ H V +T+ GEV+T+G
Sbjct: 472 IEVGYEHVVVLTDTGEVFTFG 492
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAAAGWAH 115
CG F+LA S+SGK+ +WG Y S + TP+ P+ AS + + W H
Sbjct: 318 ACGQEFSLALSDSGKVFSWGKGLHGNLGYDVSTMLSQSTPKVIPMLPPASQI-SCGNW-H 375
Query: 116 CVSVTEAGEVYTWG 129
+ ++++G+VYT+G
Sbjct: 376 SMVLSKSGDVYTFG 389
>gi|119626424|gb|EAX06019.1| hect domain and RLD 6, isoform CRA_b [Homo sapiens]
Length = 1028
Score = 57.4 bits (137), Expect = 9e-06, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 66/147 (44%), Gaps = 32/147 (21%)
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------ 258
++TLN +KI +V+ G H+L LS QV+ WG GQLGLG +P
Sbjct: 122 IMTLN-DIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEG 180
Query: 259 IPCLEHAASGKDRPLLVRQGS-----VNSSGK---AGRSY-----------------VKE 293
IP + AA G L G+ NS+G+ +GR+ V
Sbjct: 181 IPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVY 240
Query: 294 IACGGRHSAVVTDAGALLTFGWGLYGQ 320
I+CG H+AV+T G + TFG GQ
Sbjct: 241 ISCGDAHTAVLTQDGKVFTFGDNRSGQ 267
Score = 45.4 bits (106), Expect = 0.036, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 56/129 (43%), Gaps = 31/129 (24%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR 271
V+ G H+L + G+V+ WG G EGQLG+G ++ TP I L + G
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYH 139
Query: 272 PLLVRQGSV------NSSGKAG--------------RSY----VKEIACGGRHSAVVTDA 307
L + + S NS G+ G RS + ++A GG HS ++
Sbjct: 140 SLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLC 199
Query: 308 GALLTFGWG 316
G +FGWG
Sbjct: 200 GT--SFGWG 206
>gi|301120392|ref|XP_002907923.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262102954|gb|EEY61006.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 255
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 88/257 (34%), Gaps = 84/257 (32%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LAT+E G + +WGS E P+ +++ GW H V + G
Sbjct: 42 LATAE-GDVYSWGSGRHGQLGLGAEALKSEAPKRIETLKGTAIINVFCGWEHSVFRSSDG 100
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
++YT G+ + G+ +ALP + PS+
Sbjct: 101 DIYT------------------CGNNRHGQLGQVNALPIQVVDPSNS------------- 129
Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
N ++ +V+ G L L+D G++ WG G GQ
Sbjct: 130 -------------------------NISLRTAQVSCGWHFVLCLTDTGKLVTWGKGSHGQ 164
Query: 244 LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
LGLG P ++P H A + +ACG HS V
Sbjct: 165 LGLGG-FDNAYEPQVVP-FPHTA-------------------------RHVACGSEHSMV 197
Query: 304 VTDAGALLTFGWGLYGQ 320
VT +G L T GWG +G
Sbjct: 198 VTTSGDLYTCGWGEHGN 214
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 32/146 (21%)
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE- 263
+V L P +++ +A G +H+L+ + G V+ WG G GQLGLG+ P I L+
Sbjct: 21 IVHLPPRLQVASIACGWKHSLLATAEGDVYSWGSGRHGQLGLGAEALKSEAPKRIETLKG 80
Query: 264 -----------------------------HAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
H G+ L ++ ++S + R+ ++
Sbjct: 81 TAIINVFCGWEHSVFRSSDGDIYTCGNNRHGQLGQVNALPIQVVDPSNSNISLRT--AQV 138
Query: 295 ACGGRHSAVVTDAGALLTFGWGLYGQ 320
+CG +TD G L+T+G G +GQ
Sbjct: 139 SCGWHFVLCLTDTGKLVTWGKGSHGQ 164
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG F L +++GKL+TWG GQ L + P+ P P A V A G H +
Sbjct: 140 CGWHFVLCLTDTGKLVTWGKGS-HGQLGLGGFDNAYEPQVVPFPHTARHV--ACGSEHSM 196
Query: 118 SVTEAGEVYTWGWRE 132
VT +G++YT GW E
Sbjct: 197 VVTTSGDLYTCGWGE 211
>gi|349605413|gb|AEQ00660.1| putative E3 ubiquitin-protein ligase HERC4-like protein, partial
[Equus caballus]
Length = 911
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 60/134 (44%), Gaps = 28/134 (20%)
Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASG 268
+VA G H+L LS +V+ WG GQLGLG K +P L IP ++ AA G
Sbjct: 1 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGG 60
Query: 269 KDRPLLVRQGSV-----NSSGKAG------RSY-----------VKEIACGGRHSAVVTD 306
+L G++ N G+ G R + + I CG H+A +T
Sbjct: 61 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTK 120
Query: 307 AGALLTFGWGLYGQ 320
G + TFG G YGQ
Sbjct: 121 EGGVFTFGAGGYGQ 134
>gi|47214261|emb|CAG01938.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1055
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 120/323 (37%), Gaps = 53/323 (16%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKD-VCGGGCGFALATSESGKLITWGSADDEGQSYLTS 88
G E++ + P + G K+ VCGG L G + T GS G L
Sbjct: 13 GIEVERNSMFEPRNCNVFSGRGLKEAVCGGQHSVFLL--HDGSVYTCGS---NGCGQLGH 67
Query: 89 GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS 148
K G +PE + + G AH ++V E G+V+ WG G G
Sbjct: 68 NKPGTSPELVGALDTQRITLVSCGQAHSMAVNEQGQVFAWGA-------------GDGGQ 114
Query: 149 FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-----NPASGD------E 197
+T +P D R + + + + ++ + SG E
Sbjct: 115 LGLGTTEAAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGE 174
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
L P + G+ + K+ AGG H+ LS G V+GWG GQLGL I+ P
Sbjct: 175 PSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLND-IQDRAVPC 233
Query: 258 LIPCLE-----HAASGKDRPLLVRQGSVNSSGKAGRS---------YVKEIACGGRHSAV 303
I L H + G + + + + S+ + R+ + + I C HS
Sbjct: 234 HIKFLRSQKVVHISCGDEHTAALTKVRIRSASQCFRTSGGRCSNPFFCQRIGCS--HSTR 291
Query: 304 VT------DAGALLTFGWGLYGQ 320
VT G L TFG G +GQ
Sbjct: 292 VTILLWLFQDGGLFTFGDGSWGQ 314
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 13/103 (12%)
Query: 29 PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYL 86
PGTSPE L G + + CG A +A +E G++ WG+ D
Sbjct: 70 PGTSPE-----------LVGALDTQRITLVSCGQAHSMAVNEQGQVFAWGAGDGGQLGLG 118
Query: 87 TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
T+ P + + + G HC+++++ G+++TWG
Sbjct: 119 TTEAAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWG 161
>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
trifallax]
Length = 685
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 100/246 (40%), Gaps = 27/246 (10%)
Query: 18 KETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITW 75
++T VY G + I ++ + + V CG ++ + G++ +
Sbjct: 203 QQTTVYSVGRNDNGQLGQEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEVFSC 262
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR---- 131
G +D GQ K P +V+AA G+ H + + GE+Y +G
Sbjct: 263 G-FNDNGQLGHNDTKSRNQPVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQ 321
Query: 132 -------ECVPSAKVTRDFGSAGSFQKDSTGKQSALPT--EQAPPSDKRAGEEVVKRRKT 182
+ + K ++F + + Q S G Q+ L + E PS + GE
Sbjct: 322 LGIETNGQALIQPKQIQEFLTVSNIQH-SGGNQNQLHSGQEHNQPSSQSLGE-------- 372
Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
S A + A + P + L+ V I+K+A G H++ L + GQ++ +G G G
Sbjct: 373 SGAIMQG--LAESNNLNNQQPQVQYLSKKVNISKIACGCYHSIALCESGQLFTFGRGNHG 430
Query: 243 QLGLGS 248
QLG G+
Sbjct: 431 QLGQGN 436
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 23/118 (19%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P V + +T++AAG H +L+ G V G+ G GQLG G+ K + TP I L
Sbjct: 63 PSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGFNGSGQLGHGNN-KSISTPKKIESL 121
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
++ +R ++S A G + A+++ G L T G+ YGQ
Sbjct: 122 KN----------IRITHISS------------ANGCENLAIISQDGKLYTCGYNNYGQ 157
>gi|296196030|ref|XP_002745681.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Callithrix
jacchus]
Length = 1006
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 67/152 (44%), Gaps = 31/152 (20%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL- 258
+P +T G+KI +V+ G H+L LS QV+ WG GQLGLG + +P
Sbjct: 116 NFTPKKITTLTGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKELSSQASPQRV 175
Query: 259 -----IPCLEHAASGKDRPLLVRQGS-----VNSSGK---AGRSY--------------- 290
IP + AA G L G+ NS+G+ +GR+
Sbjct: 176 RSLEGIPVAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKN 235
Query: 291 --VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V I+CG H+AV++ G + TFG GQ
Sbjct: 236 LGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQ 267
>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
Length = 1049
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 61/264 (23%), Positives = 99/264 (37%), Gaps = 84/264 (31%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG + +A ++ GK+ + G+ +D GQ L K + + P K A G H
Sbjct: 40 ACGENYTVAITKEGKVYSCGN-NDYGQ--LGHEKARKRLQLIPGLDAFVFRKIACGNCHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
++V E G++++WG C + ++ G S TE+ P K G V
Sbjct: 97 LAVNEWGQLFSWG---CNMNGQL---------------GLNSVDCTERVPRMIKVLGTNV 138
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
I ++A G H++ L++ G+++ W
Sbjct: 139 -------------------------------------IVQIACGTEHSIALTNDGELYAW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G EGQLGLGS P I L + IAC
Sbjct: 162 GSNREGQLGLGSYTTTEIKPKRISTLAAVP------------------------IAFIAC 197
Query: 297 GGRHSAVVTDAGALLTFGWGLYGQ 320
GG H+ V++ +GA+ ++G +GQ
Sbjct: 198 GGYHTIVISKSGAVFSWGRNTFGQ 221
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 67/270 (24%), Positives = 96/270 (35%), Gaps = 83/270 (30%)
Query: 52 WKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAA 110
++ + G C LA +E G+L +WG + GQ L S E P + +V+ A
Sbjct: 86 FRKIACGNC-HTLAVNEWGQLFSWG-CNMNGQLGLNSVDCTERVPRMIKVLGTNVIVQIA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G H +++T GE+Y WG S ++ G S TE P
Sbjct: 144 CGTEHSIALTNDGELYAWG------------------SNREGQLGLGSYTTTEIKP---- 181
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
KR T +A V I +A GG HT+++S
Sbjct: 182 -------KRISTLAA--------------------------VPIAFIACGGYHTIVISKS 208
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
G V+ WG GQLGL ++ P + L +A
Sbjct: 209 GAVFSWGRNTFGQLGLND-VQQRNLPCQLRTLRNAK------------------------ 243
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V CG S +T G + T G G+YGQ
Sbjct: 244 VCYATCGEEFSVFLTMDGGVFTCGAGMYGQ 273
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 29/200 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G ++A + G+L WGS + EGQ L S E +P + T A+V A A G H
Sbjct: 145 GTEHSIALTNDGELYAWGS-NREGQLGLGSYTTTEI-KPKRISTLAAVPIAFIACGGYHT 202
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE-----QAPPSDKR 171
+ ++++G V++WG FG G + +Q LP + A
Sbjct: 203 IVISKSGAVFSWG----------RNTFGQLGL----NDVQQRNLPCQLRTLRNAKVCYAT 248
Query: 172 AGEE-----VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
GEE + + G+ + P V G +T+++ G RHTL
Sbjct: 249 CGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTNEILPRQVMELMGSTVTQISCGKRHTLA 308
Query: 227 L-SDMGQVWGWGYGGEGQLG 245
L G+V+ WG GG GQLG
Sbjct: 309 LVPSRGRVYAWGLGGAGQLG 328
>gi|405972531|gb|EKC37295.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
Length = 663
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 97/268 (36%), Gaps = 86/268 (32%)
Query: 49 GDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK 108
GD K V G AL T ESG+L T+G +D GQ + K P V
Sbjct: 35 GDKAKSVACGDEHTALVT-ESGRLFTFG-VNDWGQLGIDEVKVSTRPCCVKKLKPEKVKV 92
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
A G H + TE+G +YT FG+ G Q L E P S
Sbjct: 93 VACGRIHTIVATESGCLYT---------------FGANGDGQ---------LGVEDIPSS 128
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ P V P + +AAG H++ L+
Sbjct: 129 N--------------------------------CPVKVECEPR-QYKALAAGADHSVALT 155
Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
D G+++ WG G EGQLGLG I TP L+ +
Sbjct: 156 DDGELYVWGGGSEGQLGLGD-IDDKSTPTLL--------------------------STD 188
Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWG 316
+ V +ACG H+A VTD G + TFG G
Sbjct: 189 NKVISVACGYYHTAFVTDVGEVFTFGEG 216
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 102/255 (40%), Gaps = 50/255 (19%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G ++A ++ G+L WG EGQ L G + P L T+ V+ A G+ H
Sbjct: 147 GADHSVALTDDGELYVWGGGS-EGQ--LGLGDIDDKSTPTLLSTDNKVISVACGYYHTAF 203
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA----GE 174
VT+ GEV+T+G G G + + ++ P + P ++ G
Sbjct: 204 VTDVGEVFTFGE-------------GDGGKLGQGTDYGKAVAPKKVNIPEKAKSVACGGS 250
Query: 175 EVVKRRKTSSAREESE--NPASGDE---FFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
V + E N G + F+ +P V LN K+T++AAG HT ++++
Sbjct: 251 HTVVLTECGKVYTFGEGGNGQLGHKNKYFYCETP--VWLNFKHKVTQIAAGENHTALVTE 308
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
GQ++ +G G +LGL D Q S + +
Sbjct: 309 KGQLYTFGDGRHAKLGL-----------------------DHECYSNQYFPQRSKRFSKF 345
Query: 290 YVKEIACGGRHSAVV 304
V +++CGG H V+
Sbjct: 346 IVTQVSCGGCHMIVL 360
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 26/108 (24%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
K VA GG HT++L++ G+V+ +G GG GQLG ++ TP + +H
Sbjct: 241 KAKSVACGGSHTVVLTECGKVYTFGEGGNGQLGHKNKYFYCETPVWL-NFKHK------- 292
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V +IA G H+A+VT+ G L TFG G + +
Sbjct: 293 ------------------VTQIAAGENHTALVTEKGQLYTFGDGRHAK 322
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 25/110 (22%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G K VA G HT ++++ G+++ +G GQLG+ +K+
Sbjct: 35 GDKAKSVACGDEHTALVTESGRLFTFGVNDWGQLGI-DEVKV----------------ST 77
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
RP V+ K VK +ACG H+ V T++G L TFG GQ
Sbjct: 78 RPCCVK--------KLKPEKVKVVACGRIHTIVATESGCLYTFGANGDGQ 119
>gi|328874090|gb|EGG22456.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 464
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 127/328 (38%), Gaps = 57/328 (17%)
Query: 18 KETVVYMWGY-------LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESG 70
++ ++MWG LPG + P S + G D + G F L ++ G
Sbjct: 121 NDSKIFMWGTNNHGQMGLPGNQVYRYPTESEM---FKGLDIERVALGRS--FLLILTKQG 175
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
K+++ GS ++ GQ ++S + + + VV AG+ H +VT++G + WG+
Sbjct: 176 KVLSIGS-NEFGQLGISSQEQRGSQTLQVVQNLKDVVSMHAGFDHSFAVTKSGHAFGWGY 234
Query: 131 RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA-----GEEVVKRRKTS-- 183
+ ++ + ++ L P ++ G E +K K
Sbjct: 235 NVEGQLGQKIVEYERVEATGEEKQQDMHDLHKTMHPDAEYNTPTLVPGMEAIKVAKVFCG 294
Query: 184 -------SAR--------EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
SAR E+ G++ + KI ++ G H++ LS
Sbjct: 295 YDCTFLLSARGNVYAMGNNETGTLGLGEDAIGRIAKATKVQLPEKIKSISCGATHSMFLS 354
Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
+ +V+ G+G EG+LGLG+ P LIP R
Sbjct: 355 ESNKVYVCGWGAEGRLGLGNNTINRYVPTLIPFFAE----------------------NR 392
Query: 289 SYVKEIACGGRHSAVVTDAGALLTFGWG 316
V +++CGG HS ++T G + ++G G
Sbjct: 393 IKVDQVSCGGAHSLLLTTDGRVYSWGCG 420
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+K+ +V+ GG H+L+L+ G+V+ WG G +G+LG G ++ P LI E+ +
Sbjct: 393 IKVDQVSCGGAHSLLLTTDGRVYSWGCGEDGKLGHGDE-ELSNDPKLIQFFENK-----K 446
Query: 272 PLLVRQG 278
P+ + G
Sbjct: 447 PIFISAG 453
>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
Length = 4285
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 60/121 (49%), Gaps = 27/121 (22%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 3706 APTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 3756
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
PC DRP +V + V +IA GG HSA VT AG L T+G G YG
Sbjct: 3757 PC--------DRPRVVE--------SLRGTEVVDIAAGGAHSACVTSAGDLYTWGKGRYG 3800
Query: 320 Q 320
+
Sbjct: 3801 R 3801
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 2751 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 2793
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 2794 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 2834
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 540
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I SGK +V IACG +SA +T G L T+G G
Sbjct: 541 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 580
Query: 318 YGQ 320
YG+
Sbjct: 581 YGR 583
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 2738 PIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 2796
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 2797 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 2841
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 2842 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2894
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 2895 EGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 2953
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTDAG + +G
Sbjct: 2954 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDAGQVYAWGDND 2989
Query: 318 YGQR 321
+GQ+
Sbjct: 2990 HGQQ 2993
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEALQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 104/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 573
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VT+
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQPLAVTDN 624
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALT 674
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q + + P P L+P L+
Sbjct: 735 GNNDQCQ-HFDTLHQTKPEPSLLPGLD 760
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 107/280 (38%), Gaps = 61/280 (21%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG--ETPEPFPLPTEAS-----VVKA 109
GG A + GK+ G A T+G+ G + P+P + + VVK
Sbjct: 2702 AGGSKSLFAVTVEGKVYACGEA--------TNGRLGLGMSSGTVPIPRQVTALSSYVVKK 2753
Query: 110 AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
A G H ++T G+V++WG D G G F + + K + +
Sbjct: 2754 VAVHSGGRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 2803
Query: 167 PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
A TSS E GD L P +V + G ++ +VA G
Sbjct: 2804 RIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 2863
Query: 221 GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
R TL L+D G V+ WG G G+LG G + G + P + +
Sbjct: 2864 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNVPQNIER- 2905
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+N G V +I CG + S +T +G + T+G G Y
Sbjct: 2906 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDY 2938
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 2944 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT 2997
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 3731 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVVESLRGTEVVDIAAGGAHS 3782
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 3783 ACVTSAGDLYTWG 3795
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 85/212 (40%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
++VK AA H +++ GEVY+WG G G G +P
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 536
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 594
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G L ++D GQVW WG G G+LG G TP LI
Sbjct: 595 -PMLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 652
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 653 EKLQDLDVVKVRCGSQFSVALTKDGQVYSWGK 684
>gi|401411681|ref|XP_003885288.1| putative regulator of chromosome condensation domain-containing
protein [Neospora caninum Liverpool]
gi|325119707|emb|CBZ55260.1| putative regulator of chromosome condensation domain-containing
protein [Neospora caninum Liverpool]
Length = 699
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 57/130 (43%), Gaps = 31/130 (23%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P +V+ V+I V G +H L L+D G V+ +G G GQLGLG ++V P +
Sbjct: 129 LQPVVVSSLAYVRIVDVCVGEQHALFLADSGDVYAYGEGVYGQLGLGYERQIVNHPQKV- 187
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + V++IACG HS +T G L F WG
Sbjct: 188 ----------------------EGSLSQLAVQQIACGDYHSVALTTEG--LVFAWG---- 219
Query: 321 RMAKCLAGDG 330
A C+ GDG
Sbjct: 220 -AADCV-GDG 227
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 96/259 (37%), Gaps = 63/259 (24%)
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
++ +V + A G H V++T G V+ WG +CV D +G P
Sbjct: 192 SQLAVQQIACGDYHSVALTTEGLVFAWGAADCV----------------GDGSGLCRFSP 235
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPAS--------GDEFFT---LSPCLVTLNP 210
P G V + +AR + + GD FF +P ++ L P
Sbjct: 236 VRIRLPLPLGCGHFPVDACRVIAARFQQTMAVTEAGHLLVWGDTFFANFHATPEVLCLFP 295
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH-----------LI 259
+ + ++A G L L+D GQV+GWG G G+L + + P L
Sbjct: 296 -IPVVQIAIGKHFGLALTDDGQVYGWGDGTYGELTAACPMAPMTLPEPLNLKDSTGQSLP 354
Query: 260 PCLEHAASGKDRPLLVRQGSV-----NSSGKAG-------------------RSYVKEIA 295
P + A + LL + N +G+ G RS +IA
Sbjct: 355 PVVAIATGTRHAILLTHDMRLWALGDNLAGQCGVPGHQTRLSVPKMVKLGELRSRASKIA 414
Query: 296 CGGRHSAVVTDAGALLTFG 314
CG RHSA +T L +G
Sbjct: 415 CGYRHSACITPNNQLYLWG 433
>gi|363728661|ref|XP_416780.3| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC418578
[Gallus gallus]
Length = 1212
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 27/109 (24%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
K+ KVA GG HT++L++ G V+ +G G GQLG G+
Sbjct: 248 KVNKVACGGEHTVVLTETG-VYTFGLGQYGQLGHGT------------------------ 282
Query: 273 LLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
L+ + SV S K RS+ + + CG H+AV+ + G + TFG G +G+
Sbjct: 283 -LLFKTSVPKSVKHLRSHKIHNVTCGESHTAVIAENGLMFTFGDGRHGK 330
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 59/138 (42%), Gaps = 29/138 (21%)
Query: 204 CLVTLNPGVKITKVAAGGR-HTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVP 254
C+ L P + TK+A GR HTL+ ++ G V+ G EGQLGLG I
Sbjct: 84 CVKALKP--EKTKLAVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFT 141
Query: 255 TPHLIPCL-----EHAASGKDRPLLV----RQGSVNSSGKAGRSY---------VKEIAC 296
H I L AA +D L V +G + + K S V I+C
Sbjct: 142 NQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDVGKPVSSISC 201
Query: 297 GGRHSAVVTDAGALLTFG 314
G HSA +T G L TFG
Sbjct: 202 GYYHSAFITGDGELYTFG 219
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 30/133 (22%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASGKDR 271
++ G HT +++ G+++ +G GQLGLGS+ V P + L + A G++
Sbjct: 44 ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSK-NTVRKPTCVKALKPEKTKLAVCGRNH 102
Query: 272 PLL-VRQGSV-----NSSGKAG------------------RSYVKEIACGGRHSAVVTDA 307
L+ +G+V NS G+ G + +K++A G SA VT+
Sbjct: 103 TLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTED 162
Query: 308 GALLTFGWGLYGQ 320
G L +G GQ
Sbjct: 163 GQLFVWGDNSEGQ 175
>gi|428185814|gb|EKX54666.1| hypothetical protein GUITHDRAFT_40316, partial [Guillardia theta
CCMP2712]
Length = 272
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 113/283 (39%), Gaps = 46/283 (16%)
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
KL+ WG +D GQ ++ + + V A G AH V +++ G+V+TWG
Sbjct: 1 KLVAWGD-NDFGQLGVSEQMMNHSLTDVQQTFDLRVEDMACGSAHSVILSD-GKVFTWGQ 58
Query: 131 RECVPSAKVTRDF-GSAG-SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
+ D+ GS G + + D Q A + R GE V
Sbjct: 59 NKHGQLGHGPSDYLGSLGPTAKTDGKCVQVAAGYNFSMALTDR-GEIFVFGEGRHGV--- 114
Query: 189 SENPASGDEFFTLSPCLV-TLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
A GDE SP ++ +L+ PG + K+ G RH + GQ WG G +GQLG
Sbjct: 115 ---LAQGDELSKSSPQVIDSLSVPGYVVDKIFCGERHCACIVRYGQALTWGCGSDGQLGH 171
Query: 247 GSRIKMVPTPHLIPCLEHAAS---------GKDRPLLVRQGSVNS--SGKAG-------R 288
SR H +EH A+ K L S+ + +GK G R
Sbjct: 172 SSR----DDEHFPRKVEHLANVSVRTISCGSKHTCFLTSDNSLYTCGNGKDGKLGHGDER 227
Query: 289 SY-----------VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
SY VKE++CG H+A + + TFG G GQ
Sbjct: 228 SYLYPKKVETLQAVKEVSCGDYHTACIDGKSIIYTFGSGTRGQ 270
>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
Length = 1058
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 53/211 (25%), Positives = 82/211 (38%), Gaps = 46/211 (21%)
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+T E+Y WG S G + L Q P + A ++V
Sbjct: 1 MTAGTELYCWG-------------NTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVAC 47
Query: 179 RRK-----TSSAR----EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
+ TSS R +++ G + T P L+ + ++A G RH++ LS+
Sbjct: 48 GHRHTLFLTSSGRVYACGSNDHSQLGHDLPTKRPLLIPELLDYVVVQIACGSRHSMALSE 107
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
GQV WG GQLG + +V P ++ R L+ +
Sbjct: 108 WGQVLSWGDNDCGQLGQATDQDIVQLPKIV-----------RQLVSKT------------ 144
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V +IACG HS +T G L ++G +YGQ
Sbjct: 145 -VVQIACGNNHSLALTSCGELYSWGSNIYGQ 174
Score = 50.8 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 78/340 (22%), Positives = 124/340 (36%), Gaps = 102/340 (30%)
Query: 20 TVVYMWGY-------LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESG 70
T +Y WG L G E+ IL+P + K V CG L + SG
Sbjct: 5 TELYCWGNTSHGQLGLGGIEDEQ--ILTPSQVPWTPDSAIKQV---ACGHRHTLFLTSSG 59
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
++ GS D S L + P P + VV+ A G H ++++E G+V +WG
Sbjct: 60 RVYACGSND---HSQLGHDLPTKRPLLIPELLDYVVVQIACGSRHSMALSEWGQVLSWG- 115
Query: 131 RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE 190
D G G QA D ++V++ + +
Sbjct: 116 ---------DNDCGQLG----------------QATDQDIVQLPKIVRQLVSKT------ 144
Query: 191 NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
+ ++A G H+L L+ G+++ WG GQLG+ +
Sbjct: 145 -----------------------VVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNTPK 181
Query: 251 KM--------VPTPHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAG------RSY- 290
++ + T IP A G ++ + +V N+ G+ G RSY
Sbjct: 182 EVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAVFGWGRNNCGQLGLNDETSRSYP 241
Query: 291 ----------VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +ACG S +T+ G + T G G YGQ
Sbjct: 242 TQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281
Score = 46.6 bits (109), Expect = 0.018, Method: Composition-based stats.
Identities = 65/240 (27%), Positives = 91/240 (37%), Gaps = 66/240 (27%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVV 107
K V CG +LA + G+L +WGS + GQ + + K H P V
Sbjct: 143 KTVVQIACGNNHSLALTSCGELYSWGS-NIYGQLGVNTPKEVTHSNQPVRLTTLLGIPVA 201
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
A G H ++++ V+ WG C G G D T + + PT+
Sbjct: 202 AIACGGNHSFIISKSSAVFGWGRNNC----------GQLG--LNDETSR--SYPTQ---- 243
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEF----------FT----------------- 200
+K +T R A GDEF FT
Sbjct: 244 ---------LKTLRTLGVR----FVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFGANE 290
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLIL-SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ P +V G IT+VA G RHTL L G+V+G+G G GQLG S K + P ++
Sbjct: 291 MLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGTRS-TKSLTLPQVV 349
>gi|115373014|ref|ZP_01460317.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310821893|ref|YP_003954251.1| regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
gi|115369926|gb|EAU68858.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309394965|gb|ADO72424.1| Regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
Length = 864
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 98/237 (41%), Gaps = 39/237 (16%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQ---SYLTSGKHGE----- 93
+P + G S K + GG ++LA GK+ WG A++ GQ YL +GK G
Sbjct: 105 LPVNVLGLPSIKAISAGG-SYSLAVGADGKVWAWG-ANNSGQLGTGYLGNGKSGSEYADF 162
Query: 94 --TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
TP +P A+ V + G H +++ + G+++ WG +G G
Sbjct: 163 QVTPVSIVIPGGAAAV--SGGLNHSLALAKDGKLWAWG----------ANTYGQLG---- 206
Query: 152 DSTGKQSALPTEQAPPSDKRA------GEEVVKR--RKTSSAREESENPASGDEFFTLSP 203
D T P P A + R R + R S +G L+P
Sbjct: 207 DGTTANRLAPVSVNIPGGAIAIAAGWYHSLAIARDGRVWAWGRNNSGQVGNGGTANQLTP 266
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
+V PG I VA GG H+L++ G VW WG GQLG GS V +P +P
Sbjct: 267 VVVAF-PGSAIA-VAGGGSHSLVVLSNGTVWSWGANNAGQLGDGSNATRV-SPIQVP 320
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 93/227 (40%), Gaps = 22/227 (9%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +LA ++ GKL WG A+ GQ L G P + + AAGW H +
Sbjct: 180 GGLNHSLALAKDGKLWAWG-ANTYGQ--LGDGTTANRLAPVSVNIPGGAIAIAAGWYHSL 236
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++ G V+ WG + G+ G+ + T A P + + VV
Sbjct: 237 AIARDGRVWAWGRNN-------SGQVGNGGTANQ-LTPVVVAFPGSAIAVAGGGSHSLVV 288
Query: 178 KRRKT--SSAREESENPASGDEFFTLSPCLVTLNPGVKI-TKVAAGGRHTLILSDMGQVW 234
T S + G +SP V PG+ + TKVAAGG +L ++ G VW
Sbjct: 289 LSNGTVWSWGANNAGQLGDGSNATRVSPIQV---PGIGVATKVAAGGYFSLAITSDG-VW 344
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVRQG 278
WG GQLG GS + P I +A + G L++R G
Sbjct: 345 SWGQNTRGQLGNGS-LANSSVPVFITATSNALALSGGYHHSLILRPG 390
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 66/155 (42%), Gaps = 27/155 (17%)
Query: 191 NPASGDEF--FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
N SG E+ F ++P + + PG V+ G H+L L+ G++W WG GQLG G+
Sbjct: 152 NGKSGSEYADFQVTPVSIVI-PG-GAAAVSGGLNHSLALAKDGKLWAWGANTYGQLGDGT 209
Query: 249 RI-KMVPTPHLIP--CLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE------- 293
++ P IP + AA + R G V N+SG+ G
Sbjct: 210 TANRLAPVSVNIPGGAIAIAAGWYHSLAIARDGRVWAWGRNNSGQVGNGGTANQLTPVVV 269
Query: 294 --------IACGGRHSAVVTDAGALLTFGWGLYGQ 320
+A GG HS VV G + ++G GQ
Sbjct: 270 AFPGSAIAVAGGGSHSLVVLSNGTVWSWGANNAGQ 304
Score = 37.7 bits (86), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHL-IPCLEHAASGKDRPLL 274
V+AG H+L+L G V WG GQLG GS + + +P L +P ++ ++G L
Sbjct: 68 VSAGSYHSLLLRSTGAVLAWGQNNSGQLGDGSTQNRTLPVNVLGLPSIKAISAGGSYSLA 127
Query: 275 V-RQGSV-----NSSGKAGRSYV 291
V G V N+SG+ G Y+
Sbjct: 128 VGADGKVWAWGANNSGQLGTGYL 150
>gi|326670703|ref|XP_003199276.1| PREDICTED: hypothetical protein LOC571327 [Danio rerio]
Length = 1698
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 25/107 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
+ +VA GG+HTL L++ +++ +G G GQLGLG+ + + D P+
Sbjct: 243 VLQVACGGKHTLALTE-DELYCFGGGEFGQLGLGTLVFVA----------------DSPV 285
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V G + V + CG +HSA++TD+G L TFG G +G+
Sbjct: 286 AV--------GHFRKGRVTHVTCGEQHSALITDSGLLYTFGDGRHGK 324
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 26/144 (18%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P V + G + VA G HTL+ + G++ G +GQLGLG + L P
Sbjct: 77 PVCVKVLKGERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFC 136
Query: 263 EHA------ASGKDRPLLVRQGSV-----NSSGKAG---RSYV---KE---------IAC 296
++A A L G + NS+G+ G S+ KE ++C
Sbjct: 137 DYAPIKLLSAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLPKELNMGQSIHWVSC 196
Query: 297 GGRHSAVVTDAGALLTFGWGLYGQ 320
G RHSA+VTD+G + +FG G+
Sbjct: 197 GYRHSALVTDSGDVYSFGESADGR 220
>gi|301106665|ref|XP_002902415.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262098289|gb|EEY56341.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 808
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 131/322 (40%), Gaps = 68/322 (21%)
Query: 63 ALATSESGKLITWGSADDEGQSYL--TSGKHGETPEPFPLPTEAS---VVKAAAGWAHCV 117
+LA +E G++ WG EGQ L +G +P + + V K + G +H +
Sbjct: 47 SLALNEFGQVFAWGRGR-EGQLGLGNVAGVASAVSQPRRIGGALAGQLVTKISCGESHSL 105
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA-LPTEQAPPSDK------ 170
++T +G+V+ WG +P AKV D + D + A L +E+ + +
Sbjct: 106 ALTVSGDVFMWG---LLPVAKVLYDENGEATDASDRAAVELAGLSSEEMREAQRARSRGD 162
Query: 171 --RAGEEVVKRRKTSSAREESENP--ASGDEF---FTLSPCLV-TLNPG----VKITKVA 218
R ++ + R + + E+ +G+ +PC+ L G + +T +A
Sbjct: 163 LRRHMDDTIMARLVRDSMQVYEDAGVVNGENVKVQTVRAPCMTPRLATGPLARLVVTNIA 222
Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC----LEHAASGKDRPLL 274
AG H+L ++ G V+ GY GQLGLGSR + +EH A G+ L
Sbjct: 223 AGFAHSLATTNEGAVYSCGYNDNGQLGLGSRRNSAEFQRIRALESYFIEHIACGQQHSLA 282
Query: 275 V-----------------RQGSVNS-----SGKAG----RSYVKE----------IACGG 298
R G S G+ G +S++ E +A G
Sbjct: 283 CSRVIDPGENSHDDDPKSRSGVCFSWGLGVLGQLGTGINKSWLPEEVKLARPAVSVAAGS 342
Query: 299 RHSAVVTDAGALLTFGWGLYGQ 320
HS VTD G + T+G YGQ
Sbjct: 343 HHSVAVTDDGKVYTWGHSEYGQ 364
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 50/104 (48%), Gaps = 22/104 (21%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
I +AG RH+L L++ GQV+ WG G EGQLGLG+ + AS +P
Sbjct: 37 IVGFSAGERHSLALNEFGQVFAWGRGREGQLGLGN-------------VAGVASAVSQPR 83
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+ G V +I+CG HS +T +G + F WGL
Sbjct: 84 RI-------GGALAGQLVTKISCGESHSLALTVSGDV--FMWGL 118
>gi|326913438|ref|XP_003203045.1| PREDICTED: hypothetical protein LOC100541592 [Meleagris gallopavo]
Length = 1302
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 25/108 (23%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
K+ KVA GG HT++L++ G V+ +G G GQLG G+ + P + L
Sbjct: 261 KVNKVACGGEHTVVLTETG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLR--------- 310
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ ++ I CG H+AV+ + G + TFG G +G+
Sbjct: 311 ---------------KCKIRNITCGESHTAVIAENGLMFTFGDGRHGK 343
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 60/138 (43%), Gaps = 29/138 (21%)
Query: 204 CLVTLNPGVKITKVAAGGR-HTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVP 254
C+ L P + TK+A GR HTL+ ++ G ++ G GEGQLGLG I
Sbjct: 97 CVKALKP--EKTKLAVCGRNHTLVYTENGNMYAAGGNGEGQLGLGDTEERTTFHLISFFT 154
Query: 255 TPHLIPCL-----EHAASGKDRPLLV-RQGSVNSSGKAGRSYV------------KEIAC 296
H I L AA +D L V S G A ++YV I+C
Sbjct: 155 NQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTYVSVPCQVDVGKPISSISC 214
Query: 297 GGRHSAVVTDAGALLTFG 314
G HSA +T G L TFG
Sbjct: 215 GYYHSAFITGDGELYTFG 232
>gi|354485549|ref|XP_003504946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
[Cricetulus griseus]
Length = 887
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 67/156 (42%), Gaps = 37/156 (23%)
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
L P + G+KI +V+ G H+L LS+ GQV+ WG +GQLGLG + +P
Sbjct: 113 INLMPMRIKTLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQK 172
Query: 259 IPCLE---------------------------------HAASGKDRPLLVRQ-GSVNSSG 284
+ LE A SG++ + + + S+++
Sbjct: 173 VTSLEGIPLAQVAAGGSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSIDALK 232
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G Y I+CG H+AV+T G + TFG GQ
Sbjct: 233 NLGVIY---ISCGYEHTAVLTKDGQVFTFGDNSSGQ 265
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 26/109 (23%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+ I V+ G H++ + G+V+ WG G EGQLG+G ++ P I L
Sbjct: 73 LDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEINLMPMRIKTL--------- 123
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + +++CG HS +++ G + F WG Q
Sbjct: 124 ---------------GGIKIIQVSCGHYHSLALSEDGQV--FSWGKNSQ 155
>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
boliviensis]
Length = 4472
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
SP L+ V I KVA +GG+H L LS G+V+ WG +G+LG GSR
Sbjct: 3665 SPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSR---------S 3715
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 3716 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 3758
Query: 319 GQ 320
G+
Sbjct: 3759 GR 3760
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 2685 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 2727
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 2728 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 2768
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 55/123 (44%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G +
Sbjct: 170 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV------- 222
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
PL + SGK +V IACG +SA +T G L T+G G
Sbjct: 223 --------------PLEEPKAISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 268
Query: 318 YGQ 320
YG+
Sbjct: 269 YGR 271
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 2672 PIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 2730
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 2731 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 2775
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 2776 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2828
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 2829 EGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 2887
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD+G + +G
Sbjct: 2888 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDSGQVYAWGDND 2923
Query: 318 YGQR 321
+GQ+
Sbjct: 2924 HGQQ 2927
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 347 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 405
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 406 GSTHCLALTEDSEVHSWG 423
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 3843 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3901
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 3902 CTEDGEVYTWG 3912
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 92/234 (39%), Gaps = 38/234 (16%)
Query: 48 GGDSWKDVCGGGCG--FALATSESGKLITWG----------SADDEGQSYLTSGKHGETP 95
G + K V CG ++ A + G+L TWG S++DE L +G G
Sbjct: 235 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--- 291
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
+ V +G A ++VTE G+V++WG D+G G D
Sbjct: 292 ------LKVIDVACGSGDAQTLAVTENGQVWSWG----------DGDYGKLGRGGSDGCK 335
Query: 156 KQSALPTEQAPPSDK-RAGEE----VVKRRKTSS-AREESENPASGDEFFTLSPCLVTLN 209
+ Q K R G + + K + S + +++ G E P L+
Sbjct: 336 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL 395
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G K+ VAAG H L L++ +V WG + Q R+ P P +P L+
Sbjct: 396 QGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTK-PEPAALPGLD 448
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 3690 LALSSEGEVYSWGEAED--------GKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHS 3741
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 3742 ACVTAAGDLYTWG 3754
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 2878 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 2931
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 86/212 (40%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
++VK AA H +++ GEVY+WG G G G +P
Sbjct: 183 NIVKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 224
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 225 EEPKAISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 282
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 283 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 340
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 341 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 372
>gi|449468281|ref|XP_004151850.1| PREDICTED: uncharacterized protein LOC101206334 [Cucumis sativus]
Length = 1085
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 104/283 (36%), Gaps = 92/283 (32%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT 102
P L G + V G C A +L +WGS G +Y G E + P
Sbjct: 133 PIDLLSGPVLQVVGGEPCSVA------TELFSWGS----GTNYQL-GTGNEHIQKLPCKI 181
Query: 103 EA----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS 158
++ S+ +A H V+V+ G+VYTWG FG G
Sbjct: 182 DSLHGSSIKLVSASKFHSVAVSACGQVYTWG-------------FGRGGRLGH------- 221
Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK-ITKV 217
P D +G+ V ++P V G + + +
Sbjct: 222 -------PDFDIHSGQAAV-----------------------ITPRQVIFGLGSRRVRAI 251
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
AA HT+I ++ G+V+ WG EGQLG S + PTP + L
Sbjct: 252 AAAKHHTVIATEGGEVFTWGSNREGQLGYTS-VDTQPTPRRVSSL--------------- 295
Query: 278 GSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
RS + ++A +H+AVV+++G + T+G GQ
Sbjct: 296 ----------RSKIVDVAAANKHTAVVSESGEIFTWGCNREGQ 328
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQ-SYLTSGKHGE-TPEPF 98
P P R+ S SESG++ TWG + EGQ Y TS TP
Sbjct: 287 PTPRRVSSLRSKIVDVAAANKHTAVVSESGEIFTWG-CNREGQLGYGTSNSASNYTPRVV 345
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP-SAKVTRDFGSAGS 148
+ AA H + + GEVYTWG R P + R+ +G+
Sbjct: 346 EYLKGKVFARVAAAKFHTICLGVDGEVYTWGHRLVTPRRVVIARNLKKSGN 396
>gi|410910330|ref|XP_003968643.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Takifugu
rubripes]
Length = 527
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 93/225 (41%), Gaps = 33/225 (14%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK--HGETPEPFPLPTE 103
LCG G G A+AT++ G++ +WG G S L +G HG TP
Sbjct: 71 LCGKKIVSLSYGTGPHVAIATAD-GEVFSWGH---NGYSQLGNGTSTHGLTPALVSTNLL 126
Query: 104 AS-VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
V++ A G H +++T GEV+ WG+ ++G ST Q P
Sbjct: 127 GKRVIEVACGSHHTIALTTDGEVFAWGYN-------------NSGQVGSGSTANQPT-PR 172
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESE-----------NPASGDEFFTLSPCLVTLNPG 211
+ + + + S A +S G+ +PC + G
Sbjct: 173 RVSSCLQNKVVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQG 232
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPT 255
V + +VA G HT+ L+D G V+ WG GQLG G++ + VPT
Sbjct: 233 VNVIQVACGYAHTIALTDEGFVYSWGANSYGQLGTGNKCNQAVPT 277
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNP-GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L+P LV+ N G ++ +VA G HT+ L+ G+V+ WGY GQ+G GS PTP +
Sbjct: 116 LTPALVSTNLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQ-PTPRRV 174
Query: 260 -PCLE-----HAASGKDRPLLVRQG------SVNSSGKAGR-----------------SY 290
CL+ + A G+ + V N +G+ G
Sbjct: 175 SSCLQNKVVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQGVN 234
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V ++ACG H+ +TD G + ++G YGQ
Sbjct: 235 VIQVACGYAHTIALTDEGFVYSWGANSYGQ 264
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 18/171 (10%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P R+ K V CG ++A +SG++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDSGEIYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ L + + +TP +V++ A G+AH +++T+ G VY+WG
Sbjct: 208 NCNGQLGLGNNGNQQTPCRIAALQGVNVIQVACGYAHTIALTDEGFVYSWG--------- 258
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
+G G+ K + + + TE+ S+ A TS+A+ +S
Sbjct: 259 -ANSYGQLGTGNKCNQAVPTLINTEKERMSEVAA----CHTSHTSAAKTQS 304
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 56/127 (44%), Gaps = 25/127 (19%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + + G KI ++ G G H I + G+V+ WG+ G QLG G+ +
Sbjct: 57 GDLQSTIEPRRIDVLCGKKIVSLSYGTGPHVAIATADGEVFSWGHNGYSQLGNGTSTHGL 116
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
TP L+ S N GK V E+ACG H+ +T G + +
Sbjct: 117 -TPALV-------------------STNLLGKR----VIEVACGSHHTIALTTDGEVFAW 152
Query: 314 GWGLYGQ 320
G+ GQ
Sbjct: 153 GYNNSGQ 159
>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 277
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 97/260 (37%), Gaps = 89/260 (34%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVT 120
A + +G L TWG G Y G E+ P EA S+V A G H VT
Sbjct: 47 AVASNGDLYTWG-----GGMYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSRHTAVVT 101
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
G +YTWG ++ G AG D+ G Q
Sbjct: 102 SKGCLYTWG----------DKENGVAG--HGDTEGHQ----------------------- 126
Query: 181 KTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
+P L+ G K+ +++A G HT L+D + + WG G
Sbjct: 127 --------------------YTPKLLERLNGKKVVQLSACGFHTACLTDDHETFAWGEGK 166
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
G+LG G+ + +P LI L GK Y ++ACGG H
Sbjct: 167 FGRLGNGTE-RNCHSPRLIESL--------------------IGK----YPCQVACGGFH 201
Query: 301 SAVVTDAGALLTFGWGLYGQ 320
SAV+T G + TFG G +GQ
Sbjct: 202 SAVITRDGKMYTFGGGEHGQ 221
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 52/130 (40%), Gaps = 26/130 (20%)
Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKI-TKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
R E GD P V GV I T V G HT ++ G ++ WG G G+L
Sbjct: 6 RGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGGMYGKL 65
Query: 245 GLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
G G+ SG P V G S V +IACG RH+AVV
Sbjct: 66 GHGNE-----------------SGHSTPRRVE-------ALVGLSIV-DIACGSRHTAVV 100
Query: 305 TDAGALLTFG 314
T G L T+G
Sbjct: 101 TSKGCLYTWG 110
>gi|218782845|ref|YP_002434163.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218764229|gb|ACL06695.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 437
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 108/286 (37%), Gaps = 81/286 (28%)
Query: 40 SPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
SP+ R + +++ G CG +LA + G + WGS D GQ + K+ + P
Sbjct: 152 SPVKVRHIRTNPLENIVGAACGGKHSLAVASDGTVWAWGSNSD-GQIGDGTLKNRQNPRQ 210
Query: 98 ---FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST 154
F P A V AAG+AH ++++ G V+ WG E FG G D +
Sbjct: 211 VMRFGKPL-AGVKAVAAGFAHSLALSVDGTVWAWGDNE----------FGQLG----DCS 255
Query: 155 GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
P + D+ P +
Sbjct: 256 DYDRKAPVQVMHSVDR---------------------------------------PLDNV 276
Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLL 274
+AAG +L L+ G+VW WG G GQLG+G V P +P AA+G PL
Sbjct: 277 VAIAAGRAFSLALTRDGEVWAWGNNGVGQLGMGPHNGFVRDP--LPV--RAANGV--PL- 329
Query: 275 VRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ I GRHS + + G++L +G G GQ
Sbjct: 330 --------------KGVRAITANGRHSLALMNDGSVLAWGAGDRGQ 361
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 52/124 (41%), Gaps = 25/124 (20%)
Query: 200 TLSPCLVTLNPGVKIT---KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
+LSP V G + KVAAG RH+L L+ G+VW WG +GQLG G +
Sbjct: 95 SLSPVRVMHKSGAPLNGVLKVAAGERHSLALTAKGEVWTWGDNSKGQLGDGFFYE----- 149
Query: 257 HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
+ P+ VR N + ACGG+HS V G + +G
Sbjct: 150 ------------RRSPVKVRHIRTNP-----LENIVGAACGGKHSLAVASDGTVWAWGSN 192
Query: 317 LYGQ 320
GQ
Sbjct: 193 SDGQ 196
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDV--CGGGCGFALATSESGKLITWGSADDEGQSYLT 87
G P + P+P R G K V +LA G ++ WG A D GQ
Sbjct: 307 GMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLALMNDGSVLAWG-AGDRGQLGQG 365
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ H + P L + SV+ AAG H ++V E G V WG
Sbjct: 366 AQNHEDHPT---LASLHSVICLAAGRYHSLAVAENGAVLAWG 404
>gi|348534545|ref|XP_003454762.1| PREDICTED: hypothetical protein LOC100691941 [Oreochromis
niloticus]
Length = 1536
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 103/268 (38%), Gaps = 87/268 (32%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA 114
+ G + A + SGKL WG + EGQ L GK + P + + + G+
Sbjct: 145 MLAAGSNTSAALTVSGKLFMWGD-NTEGQIGL--GKESQVSSPQEVSVGQPISWVSCGYY 201
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H VT G +YT+G RD G G L T Q P G
Sbjct: 202 HSALVTVDGALYTFGE----------RDSGKLG------------LGTHQLP------GH 233
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK--ITKVAAGGRHTLILSDMGQ 232
V P LV +K + +VA GG HT+ L++ G
Sbjct: 234 RV--------------------------PQLVK---SIKEPVRQVACGGGHTVALAE-GN 263
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
V+ +G G GQLG G+ I P L+ EH K GR+
Sbjct: 264 VYTFGLGQFGQLGHGTFIFESRVPRLV---EHF-------------------KKGRAC-- 299
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQ 320
++ CG H+AV+T+ G L TFG G +G+
Sbjct: 300 QVVCGENHTAVITEDGLLYTFGDGRHGK 327
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 55/130 (42%), Gaps = 30/130 (23%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--------RIKMVPTPHLIPCLEH 264
K+ VA G HTLI + G+V+ G EGQLGLG R+ + I L
Sbjct: 89 KVQLVACGRNHTLICTAKGKVYASGGNSEGQLGLGDCEERTSFKRLDFFDSQGPIKML-- 146
Query: 265 AASGKDRPLLVRQGSV-----NSSGKAG---RSYVKE------------IACGGRHSAVV 304
AA L G + N+ G+ G S V ++CG HSA+V
Sbjct: 147 AAGSNTSAALTVSGKLFMWGDNTEGQIGLGKESQVSSPQEVSVGQPISWVSCGYYHSALV 206
Query: 305 TDAGALLTFG 314
T GAL TFG
Sbjct: 207 TVDGALYTFG 216
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 30/134 (22%)
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH-----AASGKD 270
++A G HT ++++ G+++ +G GQLGLGS++ V P + L+ A G++
Sbjct: 40 RIACGDEHTALITENGKLFMFGSNNWGQLGLGSKV-TVNKPTCVKALKSEKVQLVACGRN 98
Query: 271 RPLL-VRQGSV-----NSSGKAG------------------RSYVKEIACGGRHSAVVTD 306
L+ +G V NS G+ G + +K +A G SA +T
Sbjct: 99 HTLICTAKGKVYASGGNSEGQLGLGDCEERTSFKRLDFFDSQGPIKMLAAGSNTSAALTV 158
Query: 307 AGALLTFGWGLYGQ 320
+G L +G GQ
Sbjct: 159 SGKLFMWGDNTEGQ 172
>gi|282722854|gb|ADA84473.1| retinitis pigmentosa GTPase regulator protein 2 1-17 isoform [Danio
rerio]
Length = 708
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 25/108 (23%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
++ +VA GG HT+ L++ +V+ +G G GQLG G+ I P ++ EH G+
Sbjct: 245 RVVQVACGGGHTVALTE-NEVYSFGLGQFGQLGHGTFIFESRLPRVV---EHFRKGR--- 297
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
VK ACG H+A++TD G L TFG G +G+
Sbjct: 298 ------------------VKHAACGENHTALITDNGLLYTFGDGRHGK 327
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 60/146 (41%), Gaps = 36/146 (24%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI-------PCLEH 264
VK+T A G HTL+ + G ++ G EGQLGLG + HL+ P
Sbjct: 90 VKLT--ACGRTHTLVFTSRGNLYACGGNNEGQLGLGD-CNDRTSFHLVEFFNKQGPIKML 146
Query: 265 AASGKDRPLLVRQGSV-----NSSGKAGR---------------SYVKEIACGGRHSAVV 304
AA L + G + NS G+ G V ++CG HSA V
Sbjct: 147 AAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSVGKRVFWVSCGYYHSAFV 206
Query: 305 TDAGALLTFG------WGLYGQRMAK 324
T GAL TFG GL +++A
Sbjct: 207 TVDGALYTFGEKDSGKLGLSTEKLAN 232
>gi|192361760|ref|YP_001982981.1| IPT/TIG domain-containing protein [Cellvibrio japonicus Ueda107]
gi|190687925|gb|ACE85603.1| IPT/TIG domain protein [Cellvibrio japonicus Ueda107]
Length = 12743
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 71/274 (25%), Positives = 117/274 (42%), Gaps = 42/274 (15%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP---EPFPLPTEASVVKAAAGWA 114
G G +LA G++ WGS + GQ + + P + PL V A +
Sbjct: 12315 AGYGHSLALDSLGRVWAWGS-NSSGQLGTNNTQRSLVPILVDLSPLAGAKVVAAKATDYF 12373
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTR-DFGSAGSFQKDSTGK-QSALPTEQAPPSDKRA 172
+ +++ E+G+++ WG + R GS+GS+ T QSAL + + D A
Sbjct: 12374 N-MALDESGQLWAWG------DNRYGRLGNGSSGSYLYLPTATDQSALSSNKVVDFDIGA 12426
Query: 173 GEEVVKRRKTSSAREESENP----ASGDEFFTLSPCLVTLNP--GVKITKVAAGGRHTLI 226
V+ N +G +L P V L+ GV + V G R++++
Sbjct: 12427 -YHVLALDDAGQVWAWGNNSYGQLGNGSTANSLVPVKVNLSALEGVGVQSVEVGNRYSML 12485
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
L +G++W WGY G LG G+R + TP LI D+ G+V S A
Sbjct: 12486 LDKLGRIWTWGYNDYGSLGTGNRQSLY-TPTLI----------DQSAF--NGAVIHSIDA 12532
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G S+ H+ + ++ + T+G+G YG+
Sbjct: 12533 GNSF---------HNLAMDESNNVWTWGYGGYGE 12557
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 55/221 (24%), Positives = 89/221 (40%), Gaps = 40/221 (18%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVKAAAGWAH 115
F +A ESG+L WG D L +G G P T+ S VV G H
Sbjct: 12373 FNMALDESGQLWAWG---DNRYGRLGNGSSGSYLY-LPTATDQSALSSNKVVDFDIGAYH 12428
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
+++ +AG+V+ WG +G G + + S +P + + + G +
Sbjct: 12429 VLALDDAGQVWAWG----------NNSYGQLG----NGSTANSLVPVKVNLSALEGVGVQ 12474
Query: 176 VVK------------RRKTSSAREESENPASGDEFFTLSPCLVTLNP--GVKITKVAAGG 221
V+ R + + + +G+ +P L+ + G I + AG
Sbjct: 12475 SVEVGNRYSMLLDKLGRIWTWGYNDYGSLGTGNRQSLYTPTLIDQSAFNGAVIHSIDAGN 12534
Query: 222 R-HTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLIP 260
H L + + VW WGYGG G++G GS ++P P IP
Sbjct: 12535 SFHNLAMDESNNVWTWGYGGYGEMGNGSYSNSLLPIPVRIP 12575
Score = 43.5 bits (101), Expect = 0.14, Method: Composition-based stats.
Identities = 54/204 (26%), Positives = 85/204 (41%), Gaps = 30/204 (14%)
Query: 61 GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--------VVKAAAG 112
GF+LA + G+L WG +D GQ + S + T P+P + S ++AA
Sbjct: 11787 GFSLALDDKGQLWAWG-INDRGQLGVASTIYRST---IPVPADMSALGGTRIKTLQAAGD 11842
Query: 113 WAHCVSVTEAGEVYTWGWR--------ECVPSAKVTRDFG--SAGSFQKDSTGKQSALPT 162
+ + E G ++ WG R A V D S G + S G L
Sbjct: 11843 QGYLLD--ELGRLWAWGARVGDWTGMDSESAYAPVQVDLAEVSGGKALQMSAGNNYLLML 11900
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
++ +++ SS+ + EN + D F L +L I+ ++AG
Sbjct: 11901 DE---NNQVWVLGNANNYSASSSSADGEN--NSDNPFLNRVDLSSLGDKSAIS-ISAGSH 11954
Query: 223 HTLILSDMGQVWGWGYGGEGQLGL 246
H L+L D G +W WGY G+LG+
Sbjct: 11955 HDLLLDDEGGIWSWGYNYNGELGV 11978
Score = 42.4 bits (98), Expect = 0.31, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G I +AAG +L L D G++W WG GQLG+GS
Sbjct: 10987 GASINALAAGDAFSLALDDRGRLWSWGLNNYGQLGIGS 11024
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
V + VA G + ++ + ++G VW WG+ G+LG G VP P
Sbjct: 11398 VGLASVAVGEQFSIAIDNLGDVWSWGFNNSGELGQGHSDWAVPIP 11442
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
L+ ++ GVKI + H L L G+VW WG GQLG G+ TP ++ ++
Sbjct: 11716 LLPIDEGVKIESFVSSNDHYLALDHKGRVWAWGENYGGQLGNGT----YDTPQVLQPIDP 11771
Query: 265 AA 266
AA
Sbjct: 11772 AA 11773
Score = 39.3 bits (90), Expect = 3.0, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
L ++ I ++AG H+L L +G+VW WG GQLG
Sbjct: 12301 LRSMEDSADIIAISAGYGHSLALDSLGRVWAWGSNSSGQLG 12341
Score = 38.5 bits (88), Expect = 5.0, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
GV +++VA H L + G++W WG GQLG GS
Sbjct: 11343 GVALSRVATNTAHNLAIDGQGKLWSWGKNTYGQLGNGS 11380
>gi|408500692|ref|YP_006864611.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465516|gb|AFU71045.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1279
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 130/330 (39%), Gaps = 71/330 (21%)
Query: 21 VVYMWGYLP------GTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLI 73
+VY WG GT+ ++ +P P + GG +K V G + A ++
Sbjct: 870 IVYSWGRNDHGQLGDGTTTDR---YNPQPVKDTGGQPFKAVQVSAGVADSAAIDSENRVY 926
Query: 74 TWGS-ADDEGQS--YLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVY 126
TWGS + +GQ+ Y T+ K+ P P P V+ + W+ +++ G VY
Sbjct: 927 TWGSESTGKGQTPAYSTTRKN---PTPAADPDNPGQTLHAVQVSLNWSFVMALDADGNVY 983
Query: 127 TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA---LPTEQAPPSDKRAGEEVVKRRKTS 183
TWG+ G G+ DST S LP++ S AG T
Sbjct: 984 TWGYNTN----------GQLGNGTSDSTSYASNPARLPSQSFQASQISAGSWHALAIDTD 1033
Query: 184 --------SAREESENPASGDEFFTLSPCLVTLNP-----GVKITKVAAGGRHTLILSDM 230
+ + + ++ D++ P V NP +K T+++AG H+L++
Sbjct: 1034 GNTWTWGYNGYGQLGDGSTSDKY---KPQTVQ-NPTDTSQSLKATQISAGVDHSLVVDRD 1089
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
G +W WG+ GQLG+G+ + +P ++ + + KA
Sbjct: 1090 GSLWAWGWNSNGQLGIGNTVNQT-----------------KPATIK----DPANKAQTFK 1128
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ G HS + G L +G YGQ
Sbjct: 1129 AVRSSAGQLHSLAIRQDGNLWAWGDNQYGQ 1158
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 113/314 (35%), Gaps = 61/314 (19%)
Query: 32 SPEKSPIL-----SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYL 86
+P+K +L + P + G + V GG F++ + G WG+ + GQ
Sbjct: 769 NPDKGNVLGGQHVTITPPTINRGIRFDQVSAGGS-FSIGVASDGNAYAWGN-NKYGQLAQ 826
Query: 87 TSGK--HGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
+TP PLP A + + AAG +H +++ G VY+WG + T
Sbjct: 827 KPADVSMQKTPVRIPLPDGADSSFTYTQVAAGDSHVLAIGSNGIVYSWGRNDHGQLGDGT 886
Query: 141 RDFGSAGSFQKDSTGK-------QSALPTEQAPPSDKRA---GEEVVKRRKTSSAREESE 190
KD+ G+ + + A S+ R G E + +T + +
Sbjct: 887 TTDRYNPQPVKDTGGQPFKAVQVSAGVADSAAIDSENRVYTWGSESTGKGQTPAYSTTRK 946
Query: 191 NPASGDEFFTLSPCLVTLNPG--VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
NP +P NPG + +V+ + L G V+ WGY GQLG G+
Sbjct: 947 NP---------TPAADPDNPGQTLHAVQVSLNWSFVMALDADGNVYTWGYNTNGQLGNGT 997
Query: 249 --RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P +P AS +I+ G H+ +
Sbjct: 998 SDSTSYASNPARLPSQSFQAS-------------------------QISAGSWHALAIDT 1032
Query: 307 AGALLTFGWGLYGQ 320
G T+G+ YGQ
Sbjct: 1033 DGNTWTWGYNGYGQ 1046
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 82/221 (37%), Gaps = 33/221 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASV------VKAAAG 112
G G LA + G L +WGS +D GQ L G E EP P+ V V+A+AG
Sbjct: 242 GRGHILAVASDGNLYSWGS-NDHGQ--LGDGTTAERHEPVPVKKPQGVSQDFTWVQASAG 298
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ V + G++Y+WG +G G+ + + Q PS
Sbjct: 299 YLFSVGLGSDGKLYSWG----------DNTYGQLGNNTTTAHYTPEPVNLPQNAPSGFTW 348
Query: 173 GEEVVKRRKT----------SSAREESENPASGDEFFTLSPCLVTLNPGVKI----TKVA 218
+E V S + G +P V + GV +++
Sbjct: 349 KQEAVGSLHALGLGSDGNLYSWGDNDHNQLGDGTTTERHAPIQVKMPSGVPSGFAWKQMS 408
Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
G H+L L ++GWG G++G GS TP I
Sbjct: 409 GWGWHSLALGSDNWIYGWGANTRGEVGTGSITDNKITPVRI 449
>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Loxodonta africana]
Length = 4838
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3049 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3091
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3092 PRLIE------ALKTKR--IRDIACGSSHSAAITSSGELYTWGLGEYGR 3132
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4031 TPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4081
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP +V ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 4082 PC--------DRPRVV---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4124
Query: 319 GQ 320
G+
Sbjct: 4125 GR 4126
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 55/122 (45%), Gaps = 23/122 (18%)
Query: 201 LSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
L+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P +
Sbjct: 483 LAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPKV 541
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
I SGK +V IACG +SA +T G L T+G G Y
Sbjct: 542 ISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNY 581
Query: 319 GQ 320
G+
Sbjct: 582 GR 583
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3036 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3094
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3095 IEALKTKRIRDIACGSSHSAAITSSGELYTWGLGE----------YGRLG--HGDNT--- 3139
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3140 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3192
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3193 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3251
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTDAG + +G
Sbjct: 3252 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDAGQVYAWGDND 3287
Query: 318 YGQR 321
+GQ+
Sbjct: 3288 HGQQ 3291
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4209 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4267
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4268 CTEDGEVYTWG 4278
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 93/239 (38%), Gaps = 47/239 (19%)
Query: 92 GETPEPFPLPTEAS-VVKAAA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
G P P + +S VVK A G H ++T G+V++WG D G G
Sbjct: 3033 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG----------EGDDGKLG 3082
Query: 148 SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTL 201
F + + K + + A TSS E GD L
Sbjct: 3083 HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQL 3142
Query: 202 SPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P +V + G ++ +VA G R TL L+D G V+ WG G G+LG G
Sbjct: 3143 KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG------------ 3190
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ G + P + + +N G V +I CG + S +T +G + T+G G Y
Sbjct: 3191 -----GSEGCNIPQNIER--LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDY 3236
Score = 40.8 bits (94), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 573
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 574 YTWGRGNYGRLGHGSSEDEVIPVLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 674
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 735 GSNDQCQHFDTLRVTK-PEPSALPGLD 760
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4046 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGA 4105
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4106 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4149
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A +G TL L+D VW WG G G+LG G + G P
Sbjct: 4150 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4192
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4193 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4230
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4056 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHS 4107
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4108 ACVTAAGDLYTWG 4120
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 87/212 (41%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
+++K AA H +++ GEVY+WG C G G G +P
Sbjct: 495 NIIKIAAHSDGHHYLALAATGEVYSWG---C----------GDGGRL-----GHGDTVPL 536
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVI-- 594
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 595 -PVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 652
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 653 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 684
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3242 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT 3295
>gi|390338528|ref|XP_782246.3| PREDICTED: RCC1 and BTB domain-containing protein 1
[Strongylocentrotus purpuratus]
Length = 536
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 90/217 (41%), Gaps = 49/217 (22%)
Query: 115 HCVSVTEAGEVYTWGWR-----------ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
H V+ TE GE+Y+WG + + ++T + GS Q S + T+
Sbjct: 90 HVVAATENGEIYSWGHNGYCQLGNGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVLTD 149
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+ EV + + S A+ + +V++ G ++ +A G
Sbjct: 150 RG---------EVFAWGYNNCGQVGSGATAN----ISTPRKVVSVLGGKRVVSIACGQTS 196
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
+L + D G+V+GWGY G GQLGLG+ + P+P + L L++ Q
Sbjct: 197 SLAVVDSGEVYGWGYNGNGQLGLGNNVNQ-PSPCKVSSL--------NGLIISQA----- 242
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
ACG HS ++D G + T+G YGQ
Sbjct: 243 -----------ACGYAHSMALSDEGNIYTWGANSYGQ 268
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 103/262 (39%), Gaps = 40/262 (15%)
Query: 11 NEKMEECKETVVYMWGYLPGTSPEKSPILSPIPAR----LCGGDSWKDVCGGGCGFALAT 66
NE + K+ V+ +G ++S + R LC + G G +A
Sbjct: 36 NEAIYVTKDDEVFAFGNNHNACLGLGDVMSSLTPRKIEGLCKKGMFALAFGSG-PHVVAA 94
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE---ASVVKAAAGWAHCVSVTEAG 123
+E+G++ +WG G L +G + P + + + A G H + +T+ G
Sbjct: 95 TENGEIYSWGH---NGYCQLGNGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVLTDRG 151
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS---DKRAGEEVVKRR 180
EV+ WG+ C G GS G + + T + S KR +
Sbjct: 152 EVFAWGYNNC----------GQVGS------GATANISTPRKVVSVLGGKRVVSIACGQT 195
Query: 181 KTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
+ + + E G+ SPC V+ G+ I++ A G H++ LSD
Sbjct: 196 SSLAVVDSGEVYGWGYNGNGQLGLGNNVNQPSPCKVSSLNGLIISQAACGYAHSMALSDE 255
Query: 231 GQVWGWGYGGEGQLGLGSRIKM 252
G ++ WG GQLG G++ +
Sbjct: 256 GNIYTWGANSYGQLGTGNKANL 277
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 24/100 (24%)
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
G H + ++ G+++ WG+ G QLG G+ + + PH I
Sbjct: 88 GPHVVAATENGEIYSWGHNGYCQLGNGTTNQGL-LPHRI--------------------- 125
Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+G G + +IACG HS V+TD G + +G+ GQ
Sbjct: 126 --TGNLGSCKISQIACGSHHSLVLTDRGEVFAWGYNNCGQ 163
>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Callithrix jacchus]
Length = 4774
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
SP L+ V I KVA +GG+H L LS G+V+ WG +G+LG GSR
Sbjct: 3967 SPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSR---------S 4017
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 4018 PC--------DRPRVI---------ESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4060
Query: 319 GQ 320
G+
Sbjct: 4061 GR 4062
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 2987 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3029
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3030 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3070
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 54/121 (44%), Gaps = 23/121 (19%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 412 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 470
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I SGK +V IACG +SA +T G L T+G G
Sbjct: 471 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 510
Query: 318 Y 318
Y
Sbjct: 511 Y 511
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 2974 PIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3032
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3033 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3077
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3078 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3130
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3131 EGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3189
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD+G + +G
Sbjct: 3190 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDSGQVYAWGDND 3225
Query: 318 YGQR 321
+GQ+
Sbjct: 3226 HGQQ 3229
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 589 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 647
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 648 GSTHCLALTEDSEVHSWG 665
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4145 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4203
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4204 CTEDGEVYTWG 4214
Score = 40.8 bits (94), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 3982 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGA 4041
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4042 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4085
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A +G TL L+D VW WG G G+LG G + G P
Sbjct: 4086 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4128
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4129 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4166
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LA S G++ +WG A+D G+ S + P VV AAG AH VT AG
Sbjct: 3992 LALSSEGEVYSWGEAED-GKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVTAAG 4050
Query: 124 EVYTWG 129
++YTWG
Sbjct: 4051 DLYTWG 4056
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3180 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3233
>gi|336467535|gb|EGO55699.1| hypothetical protein NEUTE1DRAFT_67580 [Neurospora tetrasperma FGSC
2508]
gi|350287815|gb|EGZ69051.1| RCC1/BLIP-II [Neurospora tetrasperma FGSC 2509]
Length = 609
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 123/327 (37%), Gaps = 77/327 (23%)
Query: 22 VYMWGYLPG--TSPEKSPILSPIPARLCGGDS--WKDVCGGGCGFALATSESGKLITWGS 77
VY WG G +P+ + ++ P R+ D +D+ F A E G L+ WG
Sbjct: 119 VYAWGSNVGKVVAPDSNELVIKTPRRIAYFDDQVLRDL-KLDSNFGAAIDEKGNLVQWGV 177
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
D+ T G+ +VK + + GEVY+ +P A
Sbjct: 178 GFDKDHYKPTVTLKGK-----------DLVKLDVSRDRIIGLASNGEVYS------IPVA 220
Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAP-------PSDKRAGEEVVKRRK--------T 182
+ G QK++T S+L + QAP P + R GE++V R T
Sbjct: 221 AADQRAG-----QKETTASPSSLWSSQAPVNYRPLTPKNLRWGEKIVDVRSGLEHCLMLT 275
Query: 183 SSAREESENPASGDEFFTL-------------------SPCLVTLNPGVKITKVAAGGRH 223
S+ R S AS ++F + P VT G KI ++AAG H
Sbjct: 276 SNGRVFSA-AASSEDFPSKGQLGVPGLTWTNRPAGPYDQPHEVTGLSGSKIKEIAAGDYH 334
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
+L L G+V+ +G GQLG + EH RP+ + +
Sbjct: 335 SLALDTEGRVYAFGDNSFGQLGFENDT------------EHPYVDSPRPVPINKL---YH 379
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGAL 310
G R V IA GG +S DA A
Sbjct: 380 GTNLRPKVTYIAAGGPNSFFTVDARAF 406
>gi|281203960|gb|EFA78156.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 614
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G+ I ++ G RH+ +S ++ WG GQLGL + + P + ++ D
Sbjct: 322 GIAIKSISCGMRHSTAVSSELDLFVWGCNKFGQLGLDANQDQIDIPTKLKIIQFTQQDSD 381
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
LL Q + + +G + ++ACG +H+ V++ L +FG +GQ
Sbjct: 382 STLLEAQAT-KQTRSSGICSIAKVACGAKHTLVMSSDNQLYSFGSNKFGQ 430
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 44/108 (40%), Gaps = 23/108 (21%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
I KVA G +HTL++S Q++ +G GQLGLG + +P
Sbjct: 401 IAKVACGAKHTLVMSSDNQLYSFGSNKFGQLGLGD-----------------TQDRFKPT 443
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDA-GALLTFGWGLYGQ 320
L VNS+ I CG +S + G L G G YGQ
Sbjct: 444 L-----VNSNNNILIDKEFNIQCGWSNSCLFNKVDGILYLCGRGDYGQ 486
>gi|255569912|ref|XP_002525919.1| Protein pim1, putative [Ricinus communis]
gi|223534748|gb|EEF36439.1| Protein pim1, putative [Ricinus communis]
Length = 478
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 120/318 (37%), Gaps = 84/318 (26%)
Query: 56 CGGGCGFALA-------TSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK 108
CG C A+A T + +L WG L SG F L T + +
Sbjct: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNYPRLFSG-------AFALNT--IICQ 171
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
+ G H V+++E G + WG+ E ++ R G Q A ++AP
Sbjct: 172 VSCGAVHVVALSEDGLLQAWGYNE---YGQLGRGITCEG-LQGPRVINAYAKFLDEAP-- 225
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFT--------------------LSPCLVTL 208
E+VK + S + + E +T L P V
Sbjct: 226 ------ELVKITRVSCGEYHTAAISEKGEVYTWGLGSTGQLGHTSLQSGNKELLPRRVVA 279
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG--------------SRIKMVP 254
G+ IT VA GG HT ++ G ++ WG GQLGLG S ++ +P
Sbjct: 280 LDGILITDVACGGVHTCAVTQKGALYAWGGSQFGQLGLGPQTGSFSFIPSDTESFLRNIP 339
Query: 255 TPHLIPCLEHAASGKDRPLL-VRQGSV-----NSSGKAGR---SY-------------VK 292
++ A G L+ +R G + NS G+A +Y V+
Sbjct: 340 ALVFPTGVQLVACGHSHTLICLRDGRIHGWGYNSYGQAANEKTTYAWYPSPVDWCVGEVR 399
Query: 293 EIACGGRHSAVVTDAGAL 310
++A GG HSAV+TDA +L
Sbjct: 400 KLAAGGGHSAVLTDACSL 417
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 96/247 (38%), Gaps = 57/247 (23%)
Query: 94 TPEPFPLPTEASV--VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
+PE F P A+ + A G H +V G ++TWG E FG G +
Sbjct: 50 SPELFGCPAGANARWLDIACGREHTAAVASDGSLFTWGANE----------FGQLGDGTE 99
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRK-----TSSAREESENPAS------------ 194
+ ++ P K+ E VK T++ E EN +
Sbjct: 100 EG---------KKYPKKVKQLETEFVKSVSCGAHCTAAIAEPRENDGTISTSRLWVWGQN 150
Query: 195 -GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
G + L LN I +V+ G H + LS+ G + WGY GQLG G + +
Sbjct: 151 QGSNYPRLFSGAFALN--TIICQVSCGAVHVVALSEDGLLQAWGYNEYGQLGRGITCEGL 208
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
P +I +A + P LV+ + ++CG H+A +++ G + T+
Sbjct: 209 QGPRVINA--YAKFLDEAPELVK--------------ITRVSCGEYHTAAISEKGEVYTW 252
Query: 314 GWGLYGQ 320
G G GQ
Sbjct: 253 GLGSTGQ 259
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 22/109 (20%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VKIT+V+ G HT +S+ G+V+ WG G GQLG S L+P R
Sbjct: 228 VKITRVSCGEYHTAAISEKGEVYTWGLGSTGQLGHTSL--QSGNKELLP----------R 275
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
++ G + + ++ACGG H+ VT GAL +G +GQ
Sbjct: 276 RVVALDGIL----------ITDVACGGVHTCAVTQKGALYAWGGSQFGQ 314
>gi|282722850|gb|ADA84471.1| retinitis pigmentosa GTPase regulator protein 1 [Danio rerio]
Length = 1697
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 25/107 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
+ +VA GG+HTL L++ +++ +G G GQLGLG + + D P+
Sbjct: 243 VLQVACGGKHTLALTE-DELYCFGGGEFGQLGLGMLVFVA----------------DSPV 285
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V G + V + CG +HSA++TD+G L TFG G +G+
Sbjct: 286 AV--------GHFRKDRVTHVTCGEQHSALITDSGLLYTFGDGRHGK 324
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 61/144 (42%), Gaps = 26/144 (18%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P V + G + VA G HTL+ + G++ G +GQLGLG + L P
Sbjct: 77 PVCVKVLKGERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFC 136
Query: 263 EHA------ASGKDRPLLVRQGSV-----NSSGKAGR---------------SYVKEIAC 296
++A A L G + NS+G+ G + ++C
Sbjct: 137 DYAPIKLLSAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLPQELNMGQSIHWVSC 196
Query: 297 GGRHSAVVTDAGALLTFGWGLYGQ 320
G RHSA+VTD+G + TFG G+
Sbjct: 197 GYRHSALVTDSGDVYTFGESADGR 220
>gi|403218147|emb|CCK72638.1| hypothetical protein KNAG_0L00150 [Kazachstania naganishii CBS
8797]
Length = 522
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 18/112 (16%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYG----GEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
K+ +AAGG H ++L+D + + G +GQ GL + I V P I L G
Sbjct: 256 KVVDLAAGGSHLILLTDAARAYTCSTGPTDESQGQFGLLNEIPPVNLPQPIELLNQFIDG 315
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + +K+IACG H+ + D G +LTFG YGQ
Sbjct: 316 --------------GGVVQQRRIKQIACGNVHTVALDDQGRVLTFGANTYGQ 353
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 15/108 (13%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+I ++A G HT+ L D G+V +G GQ+G+ + H++ E A+ K +P
Sbjct: 323 RIKQIACGNVHTVALDDQGRVLTFGANTYGQVGVPFTYSNL---HVVYPRELPAT-KLKP 378
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ VK IA G S +V G+L++FG G GQ
Sbjct: 379 F-----------TGEETAVKAIAAGKETSYLVLSNGSLVSFGNGAIGQ 415
>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
Length = 4833
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3050 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3092
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + +A R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3093 PRLIE------ALRAKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3133
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG GSR
Sbjct: 4031 APTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSR---------S 4081
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP +V ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 4082 PC--------DRPRVV---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4124
Query: 319 GQ 320
G+
Sbjct: 4125 GR 4126
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 57/123 (46%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPL-EEPK 540
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I SGK G +V IACG +SA +T G L T+G G
Sbjct: 541 VISAF--------------------SGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGN 580
Query: 318 YGQ 320
YG+
Sbjct: 581 YGR 583
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3037 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3095
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3096 IEALRAKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3140
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3141 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3193
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3194 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3252
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD+G + +G
Sbjct: 3253 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDSGQVYAWGDND 3288
Query: 318 YGQR 321
+GQ+
Sbjct: 3289 HGQQ 3292
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4209 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4267
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4268 CTEDGEVYTWG 4278
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++ G++ +WG D++ + T +H P V+ AAG HC++
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPRLLEGLHGKKVIDVAAGSTHCLA 724
Query: 119 VTEAGEVYTWG 129
+TE EV++WG
Sbjct: 725 LTEDSEVHSWG 735
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 94/239 (39%), Gaps = 47/239 (19%)
Query: 92 GETPEPFPLPTEAS-VVKAAA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
G P P + +S VVK A G H ++T G+V++WG D G G
Sbjct: 3034 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG----------EGDDGKLG 3083
Query: 148 SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTL 201
F + + K + +A A TSS E GD L
Sbjct: 3084 HFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3143
Query: 202 SPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P +V + G ++ +VA G R TL L+D G V+ WG G G+LG G
Sbjct: 3144 KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG------------ 3191
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ G + P + + +N G V +I CG + S +T +G + T+G G Y
Sbjct: 3192 -----GSEGCNIPQNIER--LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDY 3237
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 87/231 (37%), Gaps = 65/231 (28%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
V +G HC++++ GEVY+WG E G S P ++
Sbjct: 4046 VAVNSGGKHCLALSSEGEVYSWGEAE------------------DGKLGHGSRSPCDRPR 4087
Query: 167 PSDKRAGEEVVKRRKTSSAREESENPASGDEFFT-----------------LSPCLVTLN 209
+ G EVV ++ S + + +T L P LV +
Sbjct: 4088 VVESLRGIEVVD---VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVL 4144
Query: 210 PGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
G ++ VA +G TL L+D VW WG G G+LG G +
Sbjct: 4145 QGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSD 4187
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
G P+ + S+ G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4188 GCKVPMKIE--SLTGLG------VVKVECGSQFSVALTKSGAVYTWGKGDY 4230
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 89/237 (37%), Gaps = 54/237 (22%)
Query: 53 KDVCGGGCG--FALATSESGKLITWG----------SADDEGQSYLTSGKHGETPEPFPL 100
K V CG ++ A + G+L TWG S++DE L +G G
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG-------- 603
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
+ V +G A ++VTE G+V++WG D+G G D +
Sbjct: 604 -LKVIDVACGSGDAQTLAVTENGQVWSWG----------DGDYGKLGRGGSDGCKTPKLI 652
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSS--------------AREESENPASGDEFFTLSPCLV 206
+K EVVK R S + +++ G E P L+
Sbjct: 653 --------EKLQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLL 704
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G K+ VAAG H L L++ +V WG + Q R+ P P +P L+
Sbjct: 705 EGLHGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTK-PEPAALPGLD 760
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4056 LALSSEGEVYSWGEAED--------GKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHS 4107
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4108 ACVTAAGDLYTWG 4120
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3243 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3296
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 595 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 653
Query: 261 CLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 654 KLQDLEVVKVRCGSQFSVALTKDGQVYSWGK 684
>gi|148226064|ref|NP_001089405.1| protein RCC2 homolog [Xenopus laevis]
gi|71152035|sp|Q52KW8.1|RCC2_XENLA RecName: Full=Protein RCC2 homolog
gi|62739346|gb|AAH94159.1| MGC115292 protein [Xenopus laevis]
Length = 513
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 31/140 (22%)
Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE----- 263
GV++ VA+G H+L+++ G++W WG +GQLG G IK + P LI L+
Sbjct: 138 GVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGD-IKRIDVPKLIESLKGEVFV 196
Query: 264 HAASGKDRPL-LVRQGSV-----NSSGKAGRSY-----------------VKEIACGGRH 300
HAA G++ L L GSV N G+ G + ++ACG
Sbjct: 197 HAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDAVPSPAQILYNGQPITKVACGAEF 256
Query: 301 SAVVTDAGALLTFGWGLYGQ 320
S ++ G L +FG YGQ
Sbjct: 257 SMIMDCKGNLYSFGCPEYGQ 276
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 100/276 (36%), Gaps = 73/276 (26%)
Query: 53 KDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
+ V G C +L + GKL +WG +D+GQ K + P+ V AA
Sbjct: 142 RSVASGSCAAHSLLITVEGKLWSWGR-NDKGQLGHGDIKRIDVPKLIESLKGEVFVHAAC 200
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G H +++TE G VY FG Q K A+P
Sbjct: 201 GRNHTLALTENGSVYA---------------FGENKMGQLGLGNKTDAVP---------- 235
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
SP + N G ITKVA G ++I+ G
Sbjct: 236 ------------------------------SPAQILYN-GQPITKVACGAEFSMIMDCKG 264
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN-SSGKAGR-- 288
++ +G GQLG S K + I D L+ R+ ++ K G+
Sbjct: 265 NLYSFGCPEYGQLGHNSDGKYIARAQRIEY--------DCELIARRIAIFIEKTKDGQIL 316
Query: 289 ----SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V++IACG HS ++ + ++G+G YG+
Sbjct: 317 PVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGR 352
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVP 254
P V + +A G H+LIL +V+ WG+GG G+LG R +MVP
Sbjct: 319 PNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVP 364
>gi|304318007|ref|YP_003853152.1| S-layer domain-containing protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779509|gb|ADL70068.1| S-layer domain protein [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 479
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 91/225 (40%), Gaps = 54/225 (24%)
Query: 107 VKA-AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
VKA AAG H V++ G V+ WGW +C G G D T +P +
Sbjct: 228 VKAIAAGAYHTVALKNDGTVWAWGWNDC----------GQLG----DGTTTNRTIPVQVK 273
Query: 166 PPSDKRA------GEEVVKRRKTSSAREESENPASGDEF----FTLSPCLVTLNPGVKIT 215
SD A +K T A ++E+ G+E + +P V VK
Sbjct: 274 GISDVVAIAAGMYHTVALKNDGTVWAWGDNEHDQLGNETTKEEYHSTPVQVKGISDVK-- 331
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
+AAG +T++L + G VW WG G+LG G+ + P+ V
Sbjct: 332 AIAAGASYTVVLKNDGTVWAWGVNEYGKLGDGT-----------------TNNSFTPVQV 374
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G S VK IA G H+ V+ + G + T+G+ YG+
Sbjct: 375 N----------GISNVKAIAAGAYHTVVLKNDGTVWTWGYNHYGE 409
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 101/277 (36%), Gaps = 60/277 (21%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
G +A G + WG +D GQ L G P + + VV AAG H
Sbjct: 231 IAAGAYHTVALKNDGTVWAWG-WNDCGQ--LGDGTTTNRTIPVQVKGISDVVAIAAGMYH 287
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS------ALPTEQAPPSD 169
V++ G V+ WG E D G ++ + P + SD
Sbjct: 288 TVALKNDGTVWAWGDNE------------------HDQLGNETTKEEYHSTPVQVKGISD 329
Query: 170 KRAGEE------VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A V+K T A +E GD S V +N + +AAG H
Sbjct: 330 VKAIAAGASYTVVLKNDGTVWAWGVNEYGKLGDGTTNNSFTPVQVNGISNVKAIAAGAYH 389
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
T++L + G VW WGY G+LG G+ + P+ V+
Sbjct: 390 TVVLKNDGTVWTWGYNHYGELGNGTTVD-----------------SSTPVQVK------- 425
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G S VK IA G H+ + + G + +G YG+
Sbjct: 426 ---GISDVKAIAAGACHTVALKNDGTVWAWGCNYYGE 459
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 56/136 (41%), Gaps = 27/136 (19%)
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS---RIKMVPTPHLIPCLEHAA 266
P VK +AAG HT+ L + G VW WG+ GQLG G+ R V + + AA
Sbjct: 226 PTVK--AIAAGAYHTVALKNDGTVWAWGWNDCGQLGDGTTTNRTIPVQVKGISDVVAIAA 283
Query: 267 SGKDRPLLVRQGSV------------NSSGK----------AGRSYVKEIACGGRHSAVV 304
L G+V N + K G S VK IA G ++ V+
Sbjct: 284 GMYHTVALKNDGTVWAWGDNEHDQLGNETTKEEYHSTPVQVKGISDVKAIAAGASYTVVL 343
Query: 305 TDAGALLTFGWGLYGQ 320
+ G + +G YG+
Sbjct: 344 KNDGTVWAWGVNEYGK 359
>gi|212275634|ref|NP_001130888.1| uncharacterized protein LOC100191992 [Zea mays]
gi|194690372|gb|ACF79270.1| unknown [Zea mays]
gi|219884485|gb|ACL52617.1| unknown [Zea mays]
gi|219885259|gb|ACL53004.1| unknown [Zea mays]
gi|219885461|gb|ACL53105.1| unknown [Zea mays]
gi|238010394|gb|ACR36232.1| unknown [Zea mays]
gi|414880676|tpg|DAA57807.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 556
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 56/109 (51%), Gaps = 21/109 (19%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAASGKDR 271
K+ VAAG HTL L+ GQV+ WG G G+LG G K+VPT + P + +ASG R
Sbjct: 4 KVVAVAAGEAHTLALTGDGQVYSWGRGPFGRLGNGREDDKLVPTA-VAPAV--SASGTPR 60
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P V +A G HS + D G+L ++G+ LYGQ
Sbjct: 61 PRFV-----------------AVAAGAYHSLALDDEGSLWSWGYNLYGQ 92
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 76/209 (36%), Gaps = 57/209 (27%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
VV AAG AH +++T G+VY+WG FG G+ ++D +PT A
Sbjct: 5 VVAVAAGEAHTLALTGDGQVYSWG----------RGPFGRLGNGRED----DKLVPTAVA 50
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
P ASG P + VAAG H+L
Sbjct: 51 PAVS-----------------------ASG-------------TPRPRFVAVAAGAYHSL 74
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
L D G +W WGY GQLG G + L PC P + N+ G+
Sbjct: 75 ALDDEGSLWSWGYNLYGQLGYGDQ------NSLFPCFVEQFQDLGSPETLNDEDQNTRGR 128
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFG 314
+ + GG S + G+L +G
Sbjct: 129 TCLK-LSSVTAGGMMSLAIDSLGSLWMWG 156
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 107/279 (38%), Gaps = 48/279 (17%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT----EASVVKAAAGWAHCV 117
+LA G L WGS + + G+ + PLP +VVK A G H V
Sbjct: 142 MSLAIDSLGSLWMWGSCPQQTDA----GEFCISSSSIPLPVWDFHGHTVVKVACGNEHVV 197
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL----------------- 160
+ AGE YT G + V A + G G K+S + +
Sbjct: 198 AAVSAGETYTGG--DLVCYAWGNNNHGQLGLGDKESRSRPVLISAFSEGSSWEVYEIACG 255
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVT-LNPGVKITKVAA 219
+ A ++K++ +++ R T ++ + G SP V L G + +
Sbjct: 256 ASHTAVLANKKSTDQIESRCWTFGLGDKGQ-LGHGTTATICSPQPVDGLPTGSFLISLDC 314
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
G HT ++S G+VW WG E LGL C + + SG D +
Sbjct: 315 GLFHTTVVSSDGEVWCWGM--ERGLGL--------------CPDASFSGVDEGDALYPIR 358
Query: 280 VNSSGKAGRSYV--KEIACGGRHSAVVTDAGALLTFGWG 316
V S G ++ +IACG H+ +V G + + WG
Sbjct: 359 VQSPETNGFKFLGPVQIACGAAHTVLVAGDGYRM-WAWG 396
>gi|384248236|gb|EIE21721.1| hypothetical protein COCSUDRAFT_83510, partial [Coccomyxa
subellipsoidea C-169]
Length = 184
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 25/126 (19%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDM---GQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P VT G+++T VAAG HT++ +D G V+ WG+ +GQLG G
Sbjct: 43 PMPVTSLDGLRVTHVAAGLSHTIVCTDAACAGAVYTWGWNKDGQLGHG------------ 90
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
+ G RP LV S ++V ++ G RH A +T+ G + T+GW +G
Sbjct: 91 ----YNEPGCSRPRLVE------SPMLADAHVAKVCSGSRHCAALTEGGDVYTWGWNAFG 140
Query: 320 QRMAKC 325
Q + C
Sbjct: 141 QLGSGC 146
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 56/142 (39%), Gaps = 19/142 (13%)
Query: 22 VYMWGY----LPGTSPEKSPIL-SPIPARLCGGDSWKDVCGGGCGFALATSES--GKLIT 74
+YMWG G S I+ P+P G V G + T + G + T
Sbjct: 19 LYMWGCNLHDQCGVSSNAGTIVPRPMPVTSLDGLRVTHVAAGLSHTIVCTDAACAGAVYT 78
Query: 75 WGSADD--EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
WG D G Y G P+ +A V K +G HC ++TE G+VYTWGW
Sbjct: 79 WGWNKDGQLGHGYNEPGCSRPRLVESPMLADAHVAKVCSGSRHCAALTEGGDVYTWGWNA 138
Query: 133 CVPSAKVTRDFGSAGSFQKDST 154
FG GS K S+
Sbjct: 139 ----------FGQLGSGCKTSS 150
>gi|339234781|ref|XP_003378945.1| putative HECT-domain protein [Trichinella spiralis]
gi|316978479|gb|EFV61464.1| putative HECT-domain protein [Trichinella spiralis]
Length = 994
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 84/224 (37%), Gaps = 44/224 (19%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK--------- 156
V+ A G AHCV++T G +++WG + +G G + + K
Sbjct: 114 VISVACGDAHCVALTNDGHLFSWG----------SNVYGQLGVERMNVVAKARYPRIQEI 163
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
A + A S+ E + + G + P V G+ I +
Sbjct: 164 NLANIVQIACGSNHSLALESTDGVLHAWGLNDHGQLGIGTRESFIGPTTVNKLMGIPICQ 223
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
+AAG H+L+L+ G V+GWG GQ+G + + + P L+ L
Sbjct: 224 LAAGASHSLVLTPSGTVFGWGKNMFGQIGQNEQ-RDILYPSLVKLLRTQK---------- 272
Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V +ACG S VT G L TFG G YGQ
Sbjct: 273 --------------VIRLACGEDFSVAVTATGGLFTFGAGTYGQ 302
>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
Length = 1054
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 24/126 (19%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G T P L+ + +A G RH++ L++ GQV WG GQLG + ++
Sbjct: 69 GHNLPTKRPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWGDNDCGQLGQSTDQSIIE 128
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
P +I R L+ + +V +IACG HS +T G L ++G
Sbjct: 129 LPKII-----------RSLVSK-------------HVVQIACGNNHSLALTSCGELYSWG 164
Query: 315 WGLYGQ 320
+YGQ
Sbjct: 165 SNIYGQ 170
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 75/303 (24%), Positives = 114/303 (37%), Gaps = 60/303 (19%)
Query: 33 PEKSPILSP------IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSAD--DEGQS 84
P K P+L P + A CG ++A +E G++++WG D GQS
Sbjct: 73 PTKRPLLIPELQNYVVVAIACGSRH-----------SMALTEWGQVLSWGDNDCGQLGQS 121
Query: 85 YLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
T E P+ VV+ A G H +++T GE+Y+WG + + G
Sbjct: 122 --TDQSIIELPKIIRSLVSKHVVQIACGNNHSLALTSCGELYSWG-------SNIYGQLG 172
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRA--GEEVVKRRKTSS----AREESENPASGDEF 198
+ L T P A G K+S+ R DE
Sbjct: 173 VKPPQELSHCNYPLRLTTLLGIPLATIACGGNHSFLISKSSAVFGFGRNNCGQLGLNDES 232
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
P + + + VA G ++ L++ G V+ G G GQLG GS T +
Sbjct: 233 NRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQLGHGSN-----TNEM 287
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGL 317
+P R ++ GS + ++ACG RH+ A+V G + FG G
Sbjct: 288 LP----------RMVMELMGST----------ITQVACGNRHTLALVPSRGRVYGFGLGS 327
Query: 318 YGQ 320
GQ
Sbjct: 328 SGQ 330
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 48/105 (45%), Gaps = 12/105 (11%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLIL-SDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLIP 260
P +V G IT+VA G RHTL L G+V+G+G G GQLG S + +P L P
Sbjct: 289 PRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGNRSTNSVTLPQEVLGP 348
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+ S D LL S+ + +I GG S V T
Sbjct: 349 WV----SPSDSALL------QSNDAKASVVIHQIFSGGDQSIVTT 383
>gi|449484006|ref|XP_004156756.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101206334
[Cucumis sativus]
Length = 1084
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 104/283 (36%), Gaps = 92/283 (32%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT 102
P L G + V G C A +L +WGS G +Y G E + P
Sbjct: 133 PIDLLSGPVLQVVGGEPCSVA------TELFSWGS----GTNYQL-GTGNEHIQKLPCKI 181
Query: 103 EA----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS 158
++ S+ +A H V+V+ G+VYTWG FG G
Sbjct: 182 DSLHGSSIKLVSASKFHSVAVSACGQVYTWG-------------FGRGGRLGH------- 221
Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK-ITKV 217
P D +G+ V ++P V G + + +
Sbjct: 222 -------PDFDIHSGQAAV-----------------------ITPRQVIFGLGSRRVRAI 251
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
AA HT+I ++ G+V+ WG EGQLG S + PTP + L
Sbjct: 252 AAAKHHTVIATEGGEVFTWGSNREGQLGYTS-VDTQPTPRRVSSL--------------- 295
Query: 278 GSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
RS + ++A +H+AVV+++G + T+G GQ
Sbjct: 296 ----------RSKIVDVAAANKHTAVVSESGEIFTWGCNREGQ 328
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQ-SYLTSGKHGE-TPEPF 98
P P R+ S SESG++ TWG + EGQ Y TS TP
Sbjct: 287 PTPRRVSSLRSKIVDVAAANKHTAVVSESGEIFTWG-CNREGQLGYGTSNSASNYTPRVV 345
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP-SAKVTRDFGSAGS 148
+ AA H + + GEVYTWG R P + R+ +G+
Sbjct: 346 EYLKGKVFARVAAAKFHTICLGVDGEVYTWGHRLVTPRRVVIARNLKKSGN 396
>gi|330797026|ref|XP_003286564.1| hypothetical protein DICPUDRAFT_77429 [Dictyostelium purpureum]
gi|325083469|gb|EGC36921.1| hypothetical protein DICPUDRAFT_77429 [Dictyostelium purpureum]
Length = 1440
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 68/274 (24%), Positives = 105/274 (38%), Gaps = 72/274 (26%)
Query: 52 WKD-VCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVV 107
WK V CGF L TSE K+ + G + GQ + + P P + +V+
Sbjct: 72 WKRRVVSVSCGFNHTLLLTSEY-KIFSMG-FNQVGQLGIENVVDSAVPLPVDTLQKCNVI 129
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
K AG ++T+ G++Y WG T FG G+ + + Q +PT P
Sbjct: 130 KIKAGNNISAAITDKGDLYIWG----------TSSFGQLGNGKMNPKSNQ-FIPTTILEP 178
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
+ +E +NP + ++ + V G +HT+ +
Sbjct: 179 F---------------ISEQEKDNP---------------IYQNIQYSNVCFGAQHTIAV 208
Query: 228 SDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
S G ++ WG GQLGLG K+VP P VR +
Sbjct: 209 STTGTIFSWGSNQYGQLGLGHCNTKLVPVP------------------VR------FNRH 244
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V +IA G HS+++T G + +G YGQ
Sbjct: 245 STRIVVDIASGNFHSSLLTLEGDVYLWGSNQYGQ 278
>gi|115378347|ref|ZP_01465512.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310825395|ref|YP_003957753.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|115364660|gb|EAU63730.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309398467|gb|ADO75926.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 382
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 91/220 (41%), Gaps = 34/220 (15%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA G + WG++ G P P+P + +V AAG AH ++
Sbjct: 40 GDSHSLAVHADGSVWAWGAS---ASGLREEGALSRRFAPVPVPGLSDIVSVAAGGAHSLA 96
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA-----G 173
V G ++TWG +G G D T ALP + A S RA G
Sbjct: 97 VRADGTLWTWG----------GNPYGQLG----DGTTTARALPVQVAGLSGVRAVATGLG 142
Query: 174 EEVVKRRK-TSSAREESENPASGD----EFFTLSPCLVTLNPGVK-ITKVAAGGRHTLIL 227
+ R T A ++ GD ++ T P PG+ + VAAGG H+L++
Sbjct: 143 HSLALRADGTVWAWGLNQFGQLGDGTTSQWLTPRPI-----PGLSGVRSVAAGGFHSLVV 197
Query: 228 SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
D VW WG G+LG GS + P IP L + AS
Sbjct: 198 RDDDTVWAWGSNDYGELGDGSTSRRA-VPRAIPGLRNVAS 236
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 101/249 (40%), Gaps = 35/249 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G G +LA G + WG + GQ L G + P P+P + V AAG H +
Sbjct: 140 GLGHSLALRADGTVWAWG-LNQFGQ--LGDGTTSQWLTPRPIPGLSGVRSVAAGGFHSLV 196
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV-- 176
V + V+ WG + D+G G D + + A+P +A P +
Sbjct: 197 VRDDDTVWAWG----------SNDYGELG----DGSTSRRAVP--RAIPGLRNVASVAGG 240
Query: 177 ------VKRRKTSSAREESENPASGDEFFT--LSPCLVTLNPGVKITKVAAGGRHTLILS 228
V T SA + GD F+ +P V GV+ VA H+L L
Sbjct: 241 CYHSLAVHADGTLSAWGLNSYGQLGDGTFSNRATPRPVPGLSGVRC--VATSFFHSLALR 298
Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE---HAASGKDRPLLVR-QGSVNSSG 284
G VW WG G G+ G G+ + PTP +P L A+G L V G+V++ G
Sbjct: 299 AEGTVWAWGLNGYGEQGDGTASRQSPTPRPVPGLSGVLSVATGTFHSLAVNTNGTVSAWG 358
Query: 285 KAGRSYVKE 293
G+ + +
Sbjct: 359 HNGQGQLGD 367
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 24/135 (17%)
Query: 210 PGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHL-IPCLEHAA 266
PG+ I VAAGG H+L + G +W WG GQLG G+ + +P + + A
Sbjct: 79 PGLSDIVSVAAGGAHSLAVRADGTLWTWGGNPYGQLGDGTTTARALPVQVAGLSGVRAVA 138
Query: 267 SGKDRPLLVR-QGSV-----NSSGKAGR---------------SYVKEIACGGRHSAVVT 305
+G L +R G+V N G+ G S V+ +A GG HS VV
Sbjct: 139 TGLGHSLALRADGTVWAWGLNQFGQLGDGTTSQWLTPRPIPGLSGVRSVAAGGFHSLVVR 198
Query: 306 DAGALLTFGWGLYGQ 320
D + +G YG+
Sbjct: 199 DDDTVWAWGSNDYGE 213
>gi|443732025|gb|ELU16917.1| hypothetical protein CAPTEDRAFT_195148, partial [Capitella teleta]
Length = 3237
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 43/168 (25%)
Query: 169 DKRAGEEVVKRRKTS---------SAREESENPASGD------EFFTLSPCLVTLNPGVK 213
D RA +RR S +A + ++N AS + + +L+P + G +
Sbjct: 798 DMRANSIAARRRVQSHLRAMGAKAAAHQTAQNGASAESDPDRAKISSLAPMRLEFGRGAR 857
Query: 214 -ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+ +VA G +H++IL+ G+V+ +G GQLGLG +PC H
Sbjct: 858 LVAQVACGLQHSVILTQNGEVFTFGSNQHGQLGLGD-----ANTRGVPCRIHI------- 905
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+S+V +IA G H+A++T +G +LTFG GQ
Sbjct: 906 ---------------KSHVAQIAAGSNHTALMTPSGQILTFGSHQKGQ 938
>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 967
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 115/300 (38%), Gaps = 57/300 (19%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKH 91
++ +L P R C K+V GCG + + G + T G +D GQ L K
Sbjct: 18 DEEVVLEP---RRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCG-CNDLGQ--LGHDKS 71
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
PE +V + G AH +++ + G+V++WG G
Sbjct: 72 RRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWG-------------HAVYGQIGL 118
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF-----------T 200
+ + +P SD + + + + ++S+ + G +
Sbjct: 119 STAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKE 178
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
+P + G+ +AAGG H+ L+ G ++GWG GQLGL
Sbjct: 179 CAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDE----------- 227
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ ++ P L++ S+ S + I CG H+A +T G + TFG G YGQ
Sbjct: 228 ------TDRNVPALLK--SLRSQK------IIHICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 67/196 (34%), Gaps = 60/196 (30%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GGG FAL S G + WG + GQ LT P ++ G H
Sbjct: 198 GGGHSFALTIS--GAIFGWGR-NKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHT 254
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
++T+ G V+T+G G G +ST +
Sbjct: 255 AALTKEGGVFTFGA-------------GGYGQLGHNSTNHEV------------------ 283
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL-ILSDMGQVWG 235
NP E G +T++A G +HTL + G+++
Sbjct: 284 --------------NPRKVFELM-----------GSIVTQIACGRQHTLAFVPSSGRIYS 318
Query: 236 WGYGGEGQLGLGSRIK 251
+G GG GQLG GS I
Sbjct: 319 FGLGGNGQLGTGSTIN 334
>gi|340725486|ref|XP_003401100.1| PREDICTED: RCC1 domain-containing protein 1-like isoform 1 [Bombus
terrestris]
gi|340725488|ref|XP_003401101.1| PREDICTED: RCC1 domain-containing protein 1-like isoform 2 [Bombus
terrestris]
Length = 347
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 19/120 (15%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIP 260
+P +V G+++T+++A G HT +++D G ++ WG+ G+LGL + K+V TP LI
Sbjct: 205 NPRIVDALAGIRVTQISAAGWHTAVVTDQGDLYMWGWNTNGELGLTKQESKVVATPTLI- 263
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +D + V VK++ CG + +TD G L G YGQ
Sbjct: 264 ---DFTNDQDENIEVS--------------VKKVQCGNTFTICMTDDGTLWGCGCNKYGQ 306
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 25/118 (21%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L+ + V+ +A G HT++L++ G V+ G G GQLG + ++ P ++ L
Sbjct: 154 PILIDIPKRVRFIDIAGGFDHTILLAENGDVYSMGMGTRGQLG-HNDLEDCDNPRIVDAL 212
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
AG V +I+ G H+AVVTD G L +GW G+
Sbjct: 213 -----------------------AGIR-VTQISAAGWHTAVVTDQGDLYMWGWNTNGE 246
>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
sp. JC66]
Length = 851
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 96/236 (40%), Gaps = 45/236 (19%)
Query: 91 HGETPE---PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
HG+T P + + + AAG H +++T++G+VY++G+ FG G
Sbjct: 62 HGDTANQLAPKKIEGLSDIQAIAAGTNHSLALTKSGDVYSFGFGL----------FGRLG 111
Query: 148 SFQKDST---GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPC 204
DS K L QA + + K S + G+ +P
Sbjct: 112 HGNTDSQLEPKKIEGLSDIQAIAAGDFHSLALTKSGDVYSFGNGTSGLGHGNTEDQSTPK 171
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
+ V+ +AAGG H+L L+ G V+ +G+G G+LG G + P I L
Sbjct: 172 KIESLSDVQ--AIAAGGNHSLALTKSGDVYSFGFGLFGRLGHGDTDSQLE-PKKIEDL-- 226
Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
S ++ IA GG HS +T +G + +FGWGL+GQ
Sbjct: 227 ------------------------SDIQAIAAGGNHSLALTKSGDVYSFGWGLHGQ 258
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 119/299 (39%), Gaps = 59/299 (19%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGK--HGETP---EPFPLPTEASVVKAA 110
G +LA ++SG + ++G + G+ HG T EP + + + A
Sbjct: 83 IAAGTNHSLALTKSGDVYSFG--------FGLFGRLGHGNTDSQLEPKKIEGLSDIQAIA 134
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
AG H +++T++G+VY++G T G + + + K +L QA +
Sbjct: 135 AGDFHSLALTKSGDVYSFG--------NGTSGLGHGNTEDQSTPKKIESLSDVQAIAAGG 186
Query: 171 RAGEEVVKRRKTSS------AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
+ K S R GD L P + I +AAGG H+
Sbjct: 187 NHSLALTKSGDVYSFGFGLFGR-----LGHGDTDSQLEPK--KIEDLSDIQAIAAGGNHS 239
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL---EHAASGKDRPL-LVRQGSV 280
L L+ G V+ +G+G GQLG G + TP I L + A+G + L L + G V
Sbjct: 240 LALTKSGDVYSFGWGLHGQLGHGDTENQL-TPKKIEDLSDIQAVAAGANHSLALTKSGEV 298
Query: 281 NSSGKA--------------------GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
S G+ G ++ IA G HS +T +G + +FG G G
Sbjct: 299 YSFGRGNTGQLGHGDTDDQLTPKKIEGLKDIQAIAAGDFHSLALTKSGDVYSFGNGTSG 357
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 37/224 (16%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
++P+K LS + A GG+ +LA ++SG + ++G + G+
Sbjct: 168 STPKKIESLSDVQAIAAGGN-----------HSLALTKSGDVYSFG--------FGLFGR 208
Query: 91 --HGETP---EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS 145
HG+T EP + + + AAG H +++T++G+VY++GW + G
Sbjct: 209 LGHGDTDSQLEPKKIEDLSDIQAIAAGGNHSLALTKSGDVYSFGW-------GLHGQLGH 261
Query: 146 AGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS-AREESENPASGDEFFTLSPC 204
+ + + K L QA + + K + S R + GD L+P
Sbjct: 262 GDTENQLTPKKIEDLSDIQAVAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDDQLTPK 321
Query: 205 LVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
+ G+K I +AAG H+L L+ G V+ +G G G LG G
Sbjct: 322 KI---EGLKDIQAIAAGDFHSLALTKSGDVYSFGNGTSG-LGHG 361
>gi|311260691|ref|XP_001927570.2| PREDICTED: RCC1 domain-containing protein 1 [Sus scrofa]
Length = 385
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 80/197 (40%), Gaps = 39/197 (19%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL +G++ +WG G+HG+ E P EA + +
Sbjct: 172 GAEHALLLDAAGQVFSWGG-----------GRHGQLGHGTLEAEREPRVLEALQGLPMAE 220
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V V+E G++Y WGW E A R G K TG L
Sbjct: 221 VAAGGWHSVCVSETGDIYIWGWNESGQLALPARSLAEDG---KTITGDAPGL-------- 269
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
E+ + ++ + + P + F P L+ L G K + G RHT +++
Sbjct: 270 ----NEDGSEAKRATEGEDGGPTPFIAVQPF---PALLDLPLGSDAVKASCGSRHTAVVT 322
Query: 229 DMGQVWGWGYGGEGQLG 245
G+++ WG+G GQLG
Sbjct: 323 RTGELYTWGWGKYGQLG 339
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 13/131 (9%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI--- 259
P ++ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L +R +
Sbjct: 207 PRVLEALQGLPMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPARSLAEDGKTITGDA 266
Query: 260 PCL-------EHAASGKD---RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA 309
P L + A G+D P + Q S + +CG RH+AVVT G
Sbjct: 267 PGLNEDGSEAKRATEGEDGGPTPFIAVQPFPALLDLPLGSDAVKASCGSRHTAVVTRTGE 326
Query: 310 LLTFGWGLYGQ 320
L T+GWG YGQ
Sbjct: 327 LYTWGWGKYGQ 337
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 103/266 (38%), Gaps = 50/266 (18%)
Query: 89 GKHGETPEPFPLP-TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
G+ +PEP +P V + +A W++ +VT G + SA RD ++
Sbjct: 26 GRQVYSPEPLEVPGASLDVCRVSASWSYTATVTRGGRLELS--GSVSGSAGGCRDAWASE 83
Query: 148 SFQ---KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF----FT 200
+ + TG S + P GE + +T E ++ GDE
Sbjct: 84 ALLVVLRAGTGSDSGAELQAWAPGSSLRGEPLWA--QTVVLEVERKDGPGGDETQAGPLP 141
Query: 201 LSPCLVT-----------LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
L PC L P ++ ++ G H L+L GQV+ WG G GQLG G+
Sbjct: 142 LLPCASAYVSPQPPFYRPLAPTLRARRLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT- 200
Query: 250 IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA 309
++ P ++ L+ + E+A GG HS V++ G
Sbjct: 201 LEAEREPRVLEALQGLP------------------------MAEVAAGGWHSVCVSETGD 236
Query: 310 LLTFGWGLYGQRM--AKCLAGDGINM 333
+ +GW GQ A+ LA DG +
Sbjct: 237 IYIWGWNESGQLALPARSLAEDGKTI 262
>gi|147919953|ref|YP_686293.1| regulator of chromosome condensation [Methanocella arvoryzae MRE50]
gi|110621689|emb|CAJ36967.1| predicted regulator of chromosome condensation [Methanocella
arvoryzae MRE50]
Length = 439
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 87/214 (40%), Gaps = 38/214 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG G+ + G + T G+ +D GQ L + +P ++V + AG H +
Sbjct: 95 GGYGYTVILRNDGTVWTSGN-NDAGQ--LGQRNRADNAVFTQIPNMSNVARIDAGEGHVL 151
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++ G V++WG FG G+ K TG+ + + Q S G
Sbjct: 152 ALKVDGTVWSWG----------DNSFGQLGNGSKALTGEPARVMGVQGIRSIAAGGRH-- 199
Query: 178 KRRKTSSAREESENPASGDEFF----------TLSPCLVTLNPGVKITKVAAGGRHTLIL 227
S A E A GD F + +P V +N ++T VAAG H+L L
Sbjct: 200 -----SIATYGMEAYAWGDNLFGQLGDGTYNSSNTPVKVRIN---EVTDVAAGEYHSLAL 251
Query: 228 SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+ G VW WG GQLG G +P L+P
Sbjct: 252 LEDGTVWAWGGNDYGQLGDG-----IPNNSLVPV 280
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 72/193 (37%), Gaps = 19/193 (9%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G G LA G + +WG D L +G T EP + + AAG H ++
Sbjct: 146 GEGHVLALKVDGTVWSWG---DNSFGQLGNGSKALTGEPARVMGVQGIRSIAAGGRHSIA 202
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE--- 175
T E Y WG FG G +S+ + + +D AGE
Sbjct: 203 -TYGMEAYAWG----------DNLFGQLGDGTYNSSNTPVKVRINEV--TDVAAGEYHSL 249
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ T A ++ GD S V + +AA R++L L G VW
Sbjct: 250 ALLEDGTVWAWGGNDYGQLGDGIPNNSLVPVKCGNLRNVKTIAASDRYSLALKYDGTVWA 309
Query: 236 WGYGGEGQLGLGS 248
WGY G G LG GS
Sbjct: 310 WGYNGNGVLGTGS 322
>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
scrofa]
Length = 4060
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 2272 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 2314
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 2315 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 2355
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 3254 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 3304
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 3305 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 3347
Query: 319 GQ 320
G+
Sbjct: 3348 GR 3349
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 2259 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 2317
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 2318 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 2362
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 2363 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2415
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 2416 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 2474
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTDAG + +G
Sbjct: 2475 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDAGQVYAWGDND 2510
Query: 318 YGQR 321
+GQ+
Sbjct: 2511 HGQQ 2514
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 3269 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 3328
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 3329 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVDALQGHRV 3372
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
VA +G TL L+D VW WG G G+LG G + G P
Sbjct: 3373 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 3415
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 3416 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 3453
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 3279 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 3330
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 3331 ACVTAAGDLYTWG 3343
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 2465 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT 2518
Score = 37.7 bits (86), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 3432 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3490
Query: 119 VTEAGEVYTWG 129
TE G YTWG
Sbjct: 3491 CTEDGS-YTWG 3500
>gi|221063272|gb|ACL98472.1| telophase disc 60 kDa protein [Xenopus laevis]
Length = 497
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 31/140 (22%)
Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE----- 263
GV++ VA+G H+L+++ G++W WG +GQLG G IK + P LI L+
Sbjct: 138 GVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGD-IKRIDVPKLIESLKGEVFV 196
Query: 264 HAASGKDRPL-LVRQGSV-----NSSGKAGRSY-----------------VKEIACGGRH 300
HAA G++ L L GSV N G+ G + ++ACG
Sbjct: 197 HAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDAVPSPAQILYNGQPITKVACGAEF 256
Query: 301 SAVVTDAGALLTFGWGLYGQ 320
S ++ G L +FG YGQ
Sbjct: 257 SMIMDCKGNLYSFGCPEYGQ 276
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 100/276 (36%), Gaps = 73/276 (26%)
Query: 53 KDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
+ V G C +L + GKL +WG +D+GQ K + P+ V AA
Sbjct: 142 RSVASGSCAAHSLLITVEGKLWSWGR-NDKGQLGHGDIKRIDVPKLIESLKGEVFVHAAC 200
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G H +++TE G VY FG Q K A+P
Sbjct: 201 GRNHTLALTENGSVYA---------------FGENKMGQLGLGNKTDAVP---------- 235
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
SP + N G ITKVA G ++I+ G
Sbjct: 236 ------------------------------SPAQILYN-GQPITKVACGAEFSMIMDCKG 264
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN-SSGKAGR-- 288
++ +G GQLG S K + I D L+ R+ ++ K G+
Sbjct: 265 NLYSFGCPEYGQLGHNSDGKYIARAQRIEY--------DCELIARRIAIFIEKTKDGQIL 316
Query: 289 ----SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V++IACG HS ++ + ++G+G YG+
Sbjct: 317 PVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGR 352
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVP 254
P V + +A G H+LIL +V+ WG+GG G+LG R +MVP
Sbjct: 319 PNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVP 364
>gi|41053397|ref|NP_956285.1| RCC1 and BTB domain-containing protein 1 [Danio rerio]
gi|28278439|gb|AAH45877.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Danio rerio]
gi|182890896|gb|AAI65711.1| Rcbtb1 protein [Danio rerio]
Length = 531
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 101/257 (39%), Gaps = 36/257 (14%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + + VY+ G GT +S I +P G + G L
Sbjct: 32 NEAIYITHDDEVYVLGLNCSNCLGTGDSQSTI-APKKLDCLSGKKLISLSYGSGPHVLLV 90
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGWAHCVSVTEAG 123
+E G+L WG G S L +G + P + T V + + G H +++T G
Sbjct: 91 TEDGELYAWGH---NGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALTHEG 147
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
EV+ WG+ C G GS ST Q P + + + + + +S
Sbjct: 148 EVFAWGYNNC----------GQVGS---GSTANQPT-PRKVSNCLQNKVIVNIACGQTSS 193
Query: 184 SAREESE-----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
A ++ G+ L+PC + G + ++A+G H+L L+D G
Sbjct: 194 MAVTDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLIALQGFCVLQIASGYAHSLALTDEGL 253
Query: 233 VWGWGYGGEGQLGLGSR 249
++ WG GQLG G++
Sbjct: 254 LYAWGANTYGQLGTGNK 270
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 70/150 (46%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+SP LV+ N G ++T+V+ G H+L L+ G+V+ WGY GQ+G GS PTP +
Sbjct: 116 VSPILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQ-PTPRKV 174
Query: 260 P-CLE-----HAASGKDRPLLVR-QGSV-----NSSGKAGRSY----------------- 290
CL+ + A G+ + V G V N +G+ G
Sbjct: 175 SNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLIALQGFC 234
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V +IA G HS +TD G L +G YGQ
Sbjct: 235 VLQIASGYAHSLALTDEGLLYAWGANTYGQ 264
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 25/128 (19%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T++P + G K+ ++ G G H L++++ G+++ WG+ G QLG G+ +
Sbjct: 56 TGDSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYAWGHNGYSQLGNGTTNQG 115
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
V P+LV S N GK V E++CG HS +T G +
Sbjct: 116 VS-----------------PILV---STNLQGKR----VTEVSCGSHHSLALTHEGEVFA 151
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 152 WGYNNCGQ 159
>gi|363733282|ref|XP_420476.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Gallus gallus]
Length = 560
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 28/135 (20%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAAS 267
I ++A G H++ LS G ++ WG GQLG+GS+ ++ P L IP + AA
Sbjct: 85 IVQIACGDHHSMALSRGGSLFTWGQNTHGQLGVGSQDLLISKPQLVKGLKGIPLAQIAAG 144
Query: 268 GKDRPLLVRQGSVNSSGKAGR--------------SYVKE--------IACGGRHSAVVT 305
G ++ G+V S GK SYV+ I+CG H+AV++
Sbjct: 145 GAHSVVVSLSGAVYSWGKNDFGQLGLGHTEDRDCPSYVEALEHWKAVFISCGEDHTAVLS 204
Query: 306 DAGALLTFGWGLYGQ 320
G + TFG G GQ
Sbjct: 205 KNGLVFTFGAGGAGQ 219
>gi|392343043|ref|XP_003754780.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
norvegicus]
Length = 1035
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 25/108 (23%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
K+ +VA GG HT++L++ V+ +G G GQLGLG+ + P +I + KD+
Sbjct: 282 KVIQVACGGGHTVVLTE-KVVYAFGLGQFGQLGLGTFLFETSEPKIIDRI------KDQK 334
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ I+CG H+A++TD G + TFG G +G+
Sbjct: 335 ------------------ISHISCGENHTALMTDIGLMYTFGDGRHGK 364
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 54/139 (38%), Gaps = 31/139 (22%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--------RIKMVPT 255
C+ L P K+ A G HTL+ +D G V+ G EGQLGLG +I
Sbjct: 118 CIKALKPE-KVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTP 176
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
+I L +A L G + NS G+ G I+
Sbjct: 177 SDIIKQL--SAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISWIS 234
Query: 296 CGGRHSAVVTDAGALLTFG 314
CG HSA VT G L TFG
Sbjct: 235 CGYYHSAFVTTDGELYTFG 253
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
F T P ++ KI+ ++ G HT +++D+G ++ +G G G+LGLG
Sbjct: 319 FETSEPKIIDRIKDQKISHISCGENHTALMTDIGLMYTFGDGRHGKLGLG 368
>gi|391347040|ref|XP_003747773.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Metaseiulus occidentalis]
Length = 523
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 89/229 (38%), Gaps = 56/229 (24%)
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL--PT 162
+V+ A G H V +T +G +++G + D+G G G AL P
Sbjct: 43 AVISVACGDQHSVFITASGRTFSFG----------SNDYGQLGH------GHTKALVNPR 86
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASG-----------DEFFTLSPCLVTLNPG 211
DKRA R T A ++ + A G + P LV G
Sbjct: 87 CVKALKDKRAILVACGRSHTLVATDDKKVYAFGINSEHQLGVKSSAAYHADPQLVATLNG 146
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
V++ + AG H+L LS G V+ WG GQLGLG + K R
Sbjct: 147 VQVKALTAGADHSLALSAKGIVYLWGSSEHGQLGLGRK-------------------KQR 187
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
L V+ + + GKA I+ G HSA V G L TFG +G+
Sbjct: 188 KLPVQ---LKTEGKA-----IAISAGAYHSAYVNTDGVLYTFGETEHGK 228
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 99/259 (38%), Gaps = 79/259 (30%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA S G + WGS++ GQ L G+ + P L TE + +AG H
Sbjct: 155 GADHSLALSAKGIVYLWGSSE-HGQ--LGLGRKKQRKLPVQLKTEGKAIAISAGAYHSAY 211
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
V G +YT F + GK L T AP K
Sbjct: 212 VNTDGVLYT---------------------FGETEHGK---LGTNLAPK----------K 237
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK--ITKVAAGGRHTLILSDMGQVWGW 236
RK S P ++ +T VA GG HT+ L+ G+ + +
Sbjct: 238 CRKPSKV------------------------PDIQGLVTSVACGGSHTVALTCDGRAYSF 273
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE--- 293
G G +GQLGLG R+ PHLI P V+ V S+G++ +++ E
Sbjct: 274 GDGSQGQLGLGQRVTHAGRPHLIQM----------PTGVKMARV-SAGQSHTAFLSEGRQ 322
Query: 294 -IACG-GRHSAVVTDAGAL 310
CG GRH + + G +
Sbjct: 323 MYTCGEGRHGKLALEDGEM 341
>gi|255539128|ref|XP_002510629.1| guanine nucleotide exchange factor P532, putative [Ricinus
communis]
gi|223551330|gb|EEF52816.1| guanine nucleotide exchange factor P532, putative [Ricinus
communis]
Length = 450
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 105/285 (36%), Gaps = 35/285 (12%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
+P P L+P D K V GG ++A + G++ TWG + +
Sbjct: 144 NPVFVPTLNP------NLDPAKCVALGGV-HSVALTSLGQVFTWGYGGFGALGHCVYHRE 196
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE--CVPSAKVTRDFGSAGSF 149
P + + A H ++TE GEVYTWG E R G
Sbjct: 197 -LLPRLVQGISNEKIRHIATSGTHTAAITETGEVYTWGRDEGDGRLGLGPGRGPNEGGGL 255
Query: 150 QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLN 209
S K +P + + + + G++ P +
Sbjct: 256 SIPSKVKALTVPVAAVFCGGFFTAVLTEEGQIWNWGANSNYELGRGNKTGGWQPKPIPNL 315
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
GV++ ++A+GG H+L L+D G+V WG+GG GQLG S I+ P +I L
Sbjct: 316 EGVRVIQIASGGYHSLALTDEGKVLSWGFGGHGQLGHPS-IQNQKIPMVIDAL------- 367
Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
V IACGG SA +TD G L +G
Sbjct: 368 -----------------ADQRVVYIACGGSTSAAITDEGKLYMWG 395
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 112/303 (36%), Gaps = 60/303 (19%)
Query: 39 LSPIPARLCGGDSWKDV-------CGGGCG-FALATSESGKLITWGSADDEGQSYLTSGK 90
LSP P +L + + G CG F A G + WG D L G
Sbjct: 86 LSPTPGQLLIKNQNSTITKQEAIEVGISCGLFHSALLVDGNIWIWGKGDG---GRLGFGH 142
Query: 91 HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW------------RECVPSAK 138
P P A G H V++T G+V+TWG+ RE +P +
Sbjct: 143 ENPVFVPTLNPNLDPAKCVALGGVHSVALTSLGQVFTWGYGGFGALGHCVYHRELLP--R 200
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
+ + + ++G +A TE GE R R +E
Sbjct: 201 LVQGISNEKIRHIATSGTHTAAITE--------TGEVYTWGRDEGDGRLGLGPGRGPNEG 252
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-MVPTPH 257
LS V + V GG T +L++ GQ+W WG +LG G++ P P
Sbjct: 253 GGLSIPSKVKALTVPVAAVFCGGFFTAVLTEEGQIWNWGANSNYELGRGNKTGGWQPKP- 311
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
IP LE VR V +IA GG HS +TD G +L++G+G
Sbjct: 312 -IPNLEG----------VR--------------VIQIASGGYHSLALTDEGKVLSWGFGG 346
Query: 318 YGQ 320
+GQ
Sbjct: 347 HGQ 349
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 55/131 (41%), Gaps = 38/131 (29%)
Query: 199 FTLSPC---LVTLNPGVKITK-------VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
F+LSP L+ N ITK ++ G H+ +L D G +W WG G G+LG G
Sbjct: 84 FSLSPTPGQLLIKNQNSTITKQEAIEVGISCGLFHSALLVD-GNIWIWGKGDGGRLGFGH 142
Query: 249 RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAG 308
V P L P L+ A K +A GG HS +T G
Sbjct: 143 E-NPVFVPTLNPNLDPA--------------------------KCVALGGVHSVALTSLG 175
Query: 309 ALLTFGWGLYG 319
+ T+G+G +G
Sbjct: 176 QVFTWGYGGFG 186
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 91/251 (36%), Gaps = 74/251 (29%)
Query: 33 PEKSPILS-PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDE--GQSYLTSG 89
P K L+ P+ A CGG F +E G++ WG+ + G+ T G
Sbjct: 258 PSKVKALTVPVAAVFCGGF-----------FTAVLTEEGQIWNWGANSNYELGRGNKTGG 306
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
P+P P V++ A+G H +++T+ G+V +WG FG G
Sbjct: 307 WQ---PKPIPNLEGVRVIQIASGGYHSLALTDEGKVLSWG-------------FGGHGQL 350
Query: 150 QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLN 209
S Q +P +D+R
Sbjct: 351 GHPSIQNQK-IPMVIDALADQR-------------------------------------- 371
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP-HLIPCLEHAASG 268
+ +A GG + ++D G+++ WG + QLG+ ++ P P ++ +E G
Sbjct: 372 ----VVYIACGGSTSAAITDEGKLYMWGNAKDSQLGVPGLPEVQPCPVEVVFLMEDDGLG 427
Query: 269 KDRPLLVRQGS 279
+ L V G+
Sbjct: 428 PHKVLSVAVGA 438
>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pan troglodytes]
Length = 4776
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3040 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3082
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3083 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3123
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 3969 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4019
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 4020 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4062
Query: 319 GQ 320
G+
Sbjct: 4063 GR 4064
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 539
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I SGK +V IACG +SA +T G L T+G G
Sbjct: 540 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 579
Query: 318 YGQ 320
YG+
Sbjct: 580 YGR 582
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3027 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3085
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3086 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3130
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3131 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3183
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3184 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3242
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD+G + +G
Sbjct: 3243 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDSGQVYAWGDND 3278
Query: 318 YGQR 321
+GQ+
Sbjct: 3279 HGQQ 3282
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4147 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4205
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4206 CTEDGEVYTWG 4216
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 104/274 (37%), Gaps = 49/274 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
GG A + GK+ G A + S G P P + +S VVK A G
Sbjct: 2991 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3048
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++T G+V++WG D G G F + + K + + A
Sbjct: 3049 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3098
Query: 173 GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
TSS E GD L P +V + G ++ +VA G R T
Sbjct: 3099 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3158
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L L+D G V+ WG G G+LG G + G + P + + +N G
Sbjct: 3159 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3199
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
V +I CG + S +T +G + T+G G Y
Sbjct: 3200 ------VCQIECGAQFSLALTKSGVVWTWGKGDY 3227
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 516 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 572
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 623
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 624 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 734 GSNDQCQHFDTLRVTK-PEPAALPGLD 759
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 3984 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4043
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4044 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4087
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A +G TL L+D VW WG G G+LG G + G P
Sbjct: 4088 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4130
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4131 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4168
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 3994 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4045
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4046 ACVTAAGDLYTWG 4058
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3233 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3286
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 87/212 (41%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
++VK AA H +++ GEVY+WG C G G G +P
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWG---C----------GDGGRL-----GHGDTVPL 535
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 593
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 594 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 651
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 683
>gi|408681154|ref|YP_006880981.1| RCC1 repeat domain protein [Streptomyces venezuelae ATCC 10712]
gi|328885483|emb|CCA58722.1| RCC1 repeat domain protein [Streptomyces venezuelae ATCC 10712]
Length = 394
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 86/227 (37%), Gaps = 42/227 (18%)
Query: 36 SPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
+P +PIP + D KDV G GC F++A + G + TWG D+ L +G +
Sbjct: 164 TPYKAPIPVQSL--DKVKDV-GAGCDFSVALRQDGTVWTWGKGDN---GRLGTGNNTTRE 217
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
P +P A V A G H +++T G V WG G+ G DST
Sbjct: 218 TPQKVPDLADVESVAVGCEHVLALTADGVVKAWG-------------KGAEGQLGNDSTA 264
Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSA--------------REESENPASGDEFFTL 201
S P D + V TS++ + G
Sbjct: 265 DSS-------RPVDVAHLDAVATVFATSASGFAVLDDGSVAGWGKNAERQLGDGTNANRT 317
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
+P ++ GV+ +A G TL D G V GWG QLG GS
Sbjct: 318 TPVVLDHLKGVQ--SIAGGADFTLAALDDGSVIGWGANAAAQLGDGS 362
>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Ailuropoda melanoleuca]
Length = 4837
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3090
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3091 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4030 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4080
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 4081 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4123
Query: 319 GQ 320
G+
Sbjct: 4124 GR 4125
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 482 TLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 540
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I SGK +V IACG +SA +T G L T+G G
Sbjct: 541 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 580
Query: 318 YGQ 320
YG+
Sbjct: 581 YGR 583
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3035 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3093
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3094 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3138
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3139 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3192 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3250
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTDAG + +G
Sbjct: 3251 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDAGQVYAWGDND 3286
Query: 318 YGQR 321
+GQ+
Sbjct: 3287 HGQQ 3290
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4208 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4266
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4267 CTEDGEVYTWG 4277
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 104/274 (37%), Gaps = 49/274 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
GG A + GK+ G A + S G P P + +S VVK A G
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3056
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++T G+V++WG D G G F + + K + + A
Sbjct: 3057 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3106
Query: 173 GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
TSS E GD L P +V + G ++ +VA G R T
Sbjct: 3107 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3166
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L L+D G V+ WG G G+LG G + G + P + + +N G
Sbjct: 3167 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3207
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
V +I CG + S +T +G + T+G G Y
Sbjct: 3208 ------VCQIECGAQFSLALTKSGVVWTWGKGDY 3235
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 573
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 674
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 735 GSNDQCQHFDTLRVTK-PEPAALPGLD 760
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4104
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4105 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4148
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
VA +G TL L+D VW WG G G+LG G + G P
Sbjct: 4149 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4191
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4192 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4229
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4055 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4106
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4107 ACVTAAGDLYTWG 4119
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3241 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT 3294
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 595 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 653
Query: 261 CLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 654 KLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 684
>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
catus]
Length = 4837
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3090
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3091 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4030 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4080
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 4081 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4123
Query: 319 GQ 320
G+
Sbjct: 4124 GR 4125
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 540
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I SGK +V IACG +SA +T G L T+G G
Sbjct: 541 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 580
Query: 318 YGQ 320
YG+
Sbjct: 581 YGR 583
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3035 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3093
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3094 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3138
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3139 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3192 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3250
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTDAG + +G
Sbjct: 3251 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDAGQVYAWGDND 3286
Query: 318 YGQR 321
+GQ+
Sbjct: 3287 HGQQ 3290
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4208 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4266
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4267 CTEDGEVYTWG 4277
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 104/274 (37%), Gaps = 49/274 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
GG A + GK+ G A + S G P P + +S VVK A G
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3056
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++T G+V++WG D G G F + + K + + A
Sbjct: 3057 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3106
Query: 173 GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
TSS E GD L P +V + G ++ +VA G R T
Sbjct: 3107 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3166
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L L+D G V+ WG G G+LG G + G + P + + +N G
Sbjct: 3167 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3207
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
V +I CG + S +T +G + T+G G Y
Sbjct: 3208 ------VCQIECGAQFSLALTKSGVVWTWGKGDY 3235
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 573
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPVLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 674
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 735 GSNDQCQHFDTLRVTK-PEPAALPGLD 760
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 84/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4104
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G +
Sbjct: 4105 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHHV 4148
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
VA +G TL L+D VW WG G G+LG G + G P
Sbjct: 4149 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4191
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4192 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4229
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4055 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4106
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4107 ACVTAAGDLYTWG 4119
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3241 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT 3294
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 86/212 (40%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
++VK AA H +++ GEVY+WG G G G +P
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 536
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 594
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 595 -PVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 652
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 653 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 684
>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
Length = 826
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 108/268 (40%), Gaps = 41/268 (15%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG--ETPEPFPLPTEASVVK-AAAGWA 114
G G +LA + +G++ +WG D L G H + P+ P VVK +AG+
Sbjct: 489 GSDGHSLALTTTGEVYSWGDGD---YGKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYR 545
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H +VTE GE+YTWG E ++ D+ S+ +F K ++ +
Sbjct: 546 HSAAVTEDGELYTWGDGEF---GRLGHDYTSSKNFPT----KVQSIESVGLVACGGSHTL 598
Query: 175 EVVKRRKT--SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
V + KT S E+ GD L P ++ G+ I KVA G + +L ++ GQ
Sbjct: 599 AVSQDGKTIWSFGGGENGKLGHGDTNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQ 658
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
++ WG G LG GS P L+ L+ +
Sbjct: 659 LYAWGCG--AILGCGSAEYTALRPRLVEDLQ------------------------SKRMV 692
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+IACG H +T + +G GQ
Sbjct: 693 DIACGDSHVIALTHESEVYAWGNNAMGQ 720
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 24/108 (22%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
KI+ H+L L+ G+V+ WG G G+LG G+ S + P
Sbjct: 483 KISSSKGSDGHSLALTTTGEVYSWGDGDYGKLGHGTH-----------------STQKIP 525
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
LV+ V GK VK ++ G RHSA VT+ G L T+G G +G+
Sbjct: 526 KLVKGPLV---GKV----VKCVSAGYRHSAAVTEDGELYTWGDGEFGR 566
>gi|350415154|ref|XP_003490550.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus
impatiens]
Length = 347
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 19/120 (15%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIP 260
+P +V G+K+T+++A G HT +++D G ++ WG+ G+LGL + K+V TP L+
Sbjct: 205 NPRIVDALAGIKVTQISAAGWHTAVVTDQGDLYMWGWNTHGELGLTKQESKVVATPTLV- 263
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +D + V VK++ CG + +TD G L G YGQ
Sbjct: 264 ---DFTNDQDENIEVS--------------VKKVQCGNTFTICMTDDGTLWGCGCNKYGQ 306
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 25/118 (21%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L+ + V+ +A G HT++L++ G ++ G G GQLG + ++ P ++ L
Sbjct: 154 PILIDIPKRVRFIDIAGGFDHTILLAENGDIYSMGMGTRGQLG-HNDLEDCDNPRIVDAL 212
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
AG V +I+ G H+AVVTD G L +GW +G+
Sbjct: 213 -----------------------AGIK-VTQISAAGWHTAVVTDQGDLYMWGWNTHGE 246
>gi|299117183|emb|CBN75147.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1991
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 99/263 (37%), Gaps = 55/263 (20%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEP----FPLPTEASVVKAAAGW 113
CG +LA S++G+L +G +D + G P P E VV AA G
Sbjct: 1709 CGREHSLAVSDAGRLYAFGPSDGGRLGFKAVVGTGGVSAPRIVRAPCLAEERVVAAAGGQ 1768
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H V +G+V+TWG STG E P +G
Sbjct: 1769 MHSSCVCASGKVFTWG---------------------HGSTGALGHGVAEDEPTPRMVSG 1807
Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
+ R E ++P + + T VA G HTL+L+ G+V
Sbjct: 1808 FGRDEARSAPQGAGEQDDP----------------DADILATSVACGAWHTLVLTKAGKV 1851
Query: 234 WGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
+G G GQLGL R + L P R + + + + G G YV E
Sbjct: 1852 HAFGDGFTGQLGLEDRGGEKESRALSP----------RVVRIERNAGGGGGSPGDVYVTE 1901
Query: 294 IACGGRHSAVVTDAGALLTFGWG 316
+ACG SAVV+ G L + WG
Sbjct: 1902 VACGSFSSAVVSSEGNL--YHWG 1922
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 133/338 (39%), Gaps = 68/338 (20%)
Query: 22 VYMWGYLPGTSPEKSP-------------ILSPIPARLCGGDSWKDVCGGGCGF---ALA 65
+Y+ G + G SPE L +P R+ W+ V CGF AL
Sbjct: 1553 LYVDGQVTGLSPEDEAKKRTQDQESDADGALKLLPLRIP--TEWQ-VVQVACGFRHSALV 1609
Query: 66 TSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVKAAAGWAHCVSVTE 121
T+ SG ++T G + L G + EP + T+ +VV A G H +
Sbjct: 1610 TA-SGLVLTLGHGE---TGRLGHGDEEDALEPKVVRALADTKQAVVWAGCGREHTLVALA 1665
Query: 122 AGEVYTWGWR----------ECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAP---- 166
+G VY+WGW + V S + +F + G + S G++ +L A
Sbjct: 1666 SGSVYSWGWGEGGRLGLGEVDAVLSPRRVEEFDNLGVRITRVSCGREHSLAVSDAGRLYA 1725
Query: 167 --PSD--KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
PSD + + VV S+ R +PCL ++ A G
Sbjct: 1726 FGPSDGGRLGFKAVVGTGGVSAPR------------IVRAPCLAE----ERVVAAAGGQM 1769
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
H+ + G+V+ WG+G G LG G + PTP ++ + G+D QG+
Sbjct: 1770 HSSCVCASGKVFTWGHGSTGALGHGV-AEDEPTPRMV-----SGFGRDEARSAPQGAGEQ 1823
Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ACG H+ V+T AG + FG G GQ
Sbjct: 1824 DDPDADILATSVACGAWHTLVLTKAGKVHAFGDGFTGQ 1861
>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
Length = 1046
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 112/302 (37%), Gaps = 53/302 (17%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
G ++ + P + G K+V G +L G + T GS + GQ L
Sbjct: 14 GIGASEASVFEPRSCCVFDGRGLKEVACGN-QHSLFLLHDGSVYTCGS-NSCGQ--LGHD 69
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
K G PE + + G AH ++V E G+V+ WG G G
Sbjct: 70 KGGSRPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGA-------------GDGGQL 116
Query: 150 QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD-----------EF 198
+ + +P + R + + + ++ + G+ E
Sbjct: 117 GLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEP 176
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
TLSP + G+ +T+++AGG H+ LS G V+GWG GQLGL
Sbjct: 177 STLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDE-----QDRA 231
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+PC H + + V I+CG H+A +T G L TFG G
Sbjct: 232 VPC--HIKFLRSQK------------------VVYISCGEEHTAALTKEGGLFTFGNGSK 271
Query: 319 GQ 320
GQ
Sbjct: 272 GQ 273
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 100/278 (35%), Gaps = 31/278 (11%)
Query: 46 LCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE 103
L G + + G CG A LA +E G++ WG+ D T+ + P E
Sbjct: 77 LVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCE 136
Query: 104 ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
+ + G HC+++++ G+++ WG S ++ G + +P
Sbjct: 137 HRISQVMCGNHHCIALSKDGQLFVWGENS---SGQLGLGKGEPSTLSPQPLKSLCGIPLT 193
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
Q + + + DE PC + K+ ++ G H
Sbjct: 194 QISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEH 253
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
T L+ G ++ +G G +GQLG S ++ PL R + +
Sbjct: 254 TAALTKEGGLFTFGNGSKGQLG-------------------HDSTRNEPLPRRVMELMGT 294
Query: 284 GKAGRSYVKEIACGGRHS-AVVTDAGALLTFGWGLYGQ 320
V +IACG H+ A V G + FG GQ
Sbjct: 295 E------VSQIACGRNHTLAFVPSTGLIYAFGCNTQGQ 326
>gi|357508731|ref|XP_003624654.1| Ankyrin repeat domain-containing protein [Medicago truncatula]
gi|124359292|gb|ABD28429.2| Regulator of chromosome condensation/beta-lactamase-inhibitor
protein II [Medicago truncatula]
gi|355499669|gb|AES80872.1| Ankyrin repeat domain-containing protein [Medicago truncatula]
Length = 1099
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 121/313 (38%), Gaps = 87/313 (27%)
Query: 61 GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVK-AAAGWAHC 116
G +L +E L +WGS G +Y G + P ++ S++K +A H
Sbjct: 162 GLSLVATE---LFSWGS----GANYQL-GTGNAHIQKLPCKVDSLNGSIIKLISAAKFHS 213
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF---QKDSTGKQSALPTEQAPPSDKRAG 173
V++T+ GEVYTWG FG G D Q+A+ T P +G
Sbjct: 214 VALTDRGEVYTWG-------------FGRGGRLGHPDFDIHSGQAAVIT----PRQVISG 256
Query: 174 EEVVKRRKTSSAREESENPASGDEFFT--------LSPCLVTLNPG--------VKITKV 217
+ ++A+ + G E FT L V P +I V
Sbjct: 257 LGSRRVMAIAAAKHHTVVATQGGEVFTWGSNREGQLGYTSVDTQPTPRRVSTLRSRIVAV 316
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLE------------- 263
AA +HT ++SD+G+V+ WG EGQLG G S TPH++ L+
Sbjct: 317 AAANKHTAVISDLGEVFTWGCNREGQLGYGTSNSASNYTPHVVESLKGKILTRVSAAKYH 376
Query: 264 --------------HAASGKDRPLLVRQGSVNSSG-------KAGRSYVKEIACGGRHSA 302
H R ++ R ++ SG + R +V IA G HS
Sbjct: 377 TIVLGSDGEVFTWGHRLVTPKRVVITR--NLKKSGSIPLKFHRKERLHVVSIAAGMAHSM 434
Query: 303 VVTDAGALLTFGW 315
+T+ GAL F W
Sbjct: 435 ALTEDGAL--FYW 445
>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
familiaris]
Length = 4837
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3090
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3091 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4030 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4080
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 4081 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4123
Query: 319 GQ 320
G+
Sbjct: 4124 GR 4125
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 540
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I SGK +V IACG +SA +T G L T+G G
Sbjct: 541 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 580
Query: 318 YGQ 320
YG+
Sbjct: 581 YGR 583
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3035 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3093
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3094 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3138
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3139 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3192 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3250
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTDAG + +G
Sbjct: 3251 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDAGQVYAWGDND 3286
Query: 318 YGQR 321
+GQ+
Sbjct: 3287 HGQQ 3290
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4208 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4266
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4267 CTEDGEVYTWG 4277
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 93/239 (38%), Gaps = 47/239 (19%)
Query: 92 GETPEPFPLPTEAS-VVKAAA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
G P P + +S VVK A G H ++T G+V++WG D G G
Sbjct: 3032 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG----------EGDDGKLG 3081
Query: 148 SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTL 201
F + + K + + A TSS E GD L
Sbjct: 3082 HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3141
Query: 202 SPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P +V + G ++ +VA G R TL L+D G V+ WG G G+LG G
Sbjct: 3142 KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG------------ 3189
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ G + P + + +N G V +I CG + S +T +G + T+G G Y
Sbjct: 3190 -----GSEGCNIPQNIER--LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDY 3235
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 573
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 674
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 735 GSNDQCQHFDTLRVTK-PEPAALPGLD 760
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4104
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4105 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4148
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
VA +G TL L+D VW WG G G+LG G + G P
Sbjct: 4149 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4191
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4192 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4229
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4055 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4106
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4107 ACVTAAGDLYTWG 4119
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3241 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT 3294
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 86/212 (40%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
++VK AA H +++ GEVY+WG G G G +P
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 536
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 594
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 595 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 652
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 653 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 684
>gi|323445024|gb|EGB01858.1| hypothetical protein AURANDRAFT_69426 [Aureococcus anophagefferens]
Length = 317
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 54/119 (45%), Gaps = 26/119 (21%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+ V AG H+L L G V+ WG G +G LG G R + + P + K RP
Sbjct: 38 SVVAVGAGRTHSLALDADGAVYSWGCGDDGALGHGDRRRQL-APRAVEFF------KTRP 90
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQRMAKCLAGDGI 331
++CG RH+AVVT GAL+T+GW YGQ A GDG+
Sbjct: 91 ------------------AAAVSCGSRHNAVVTADGALVTWGWAAYGQCGAS-AGGDGL 130
>gi|224043366|ref|XP_002198142.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Taeniopygia
guttata]
Length = 537
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 97/237 (40%), Gaps = 38/237 (16%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT +S I+ LCG G G L T E G++ WG G S L +G
Sbjct: 61 GTGDNQSTIVPKKLEALCGKKISSLSYGSGPHVVLCT-EDGEVYAWG---HNGYSQLGNG 116
Query: 90 KHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
+ P + T VV+ A G H ++++ G++Y WG+ C G
Sbjct: 117 TTNQGITPVQVCTNLLIKKVVEVACGSHHSMALSMDGDLYAWGYNNC----------GQV 166
Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR--KTSSAREESENPASG--------- 195
GS ST Q PT + S+ G+ VV +TSS + G
Sbjct: 167 GS---GSTANQ---PTPR-RVSNCLQGKIVVGIACGQTSSMAVVNNGEVYGWGYNGNGQL 219
Query: 196 ---DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
+ L+PC V V + ++A G HTL L+D G ++ WG GQLG G++
Sbjct: 220 GLGNNGNQLTPCRVAALHSVCVLQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNK 276
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 67/150 (44%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
++P V N +K + +VA G H++ LS G ++ WGY GQ+G GS PTP +
Sbjct: 122 ITPVQVCTNLLIKKVVEVACGSHHSMALSMDGDLYAWGYNNCGQVGSGSTANQ-PTPRRV 180
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAG-----------------RSY 290
CL+ A G+ + +V G V N +G+ G
Sbjct: 181 SNCLQGKIVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHSVC 240
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V +IACG H+ +TD G L +G YGQ
Sbjct: 241 VLQIACGYAHTLALTDEGLLYAWGANTYGQ 270
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 72/181 (39%), Gaps = 23/181 (12%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
+Y WGY G S P P R+ K V G CG ++A +G++ WG
Sbjct: 155 LYAWGYNNCGQVGSGSTANQPTPRRVSNCLQGKIVVGIACGQTSSMAVVNNGEVYGWGY- 213
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ L + + TP V++ A G+AH +++T+ G +Y WG
Sbjct: 214 NGNGQLGLGNNGNQLTPCRVAALHSVCVLQIACGYAHTLALTDEGLLYAWG--------- 264
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
A ++ + TG +S + +P E VV+ SA + SG +
Sbjct: 265 -------ANTYGQLGTGNKS---NQLSPVQIMMEKERVVEIAACHSAHTSAAKTQSGQVY 314
Query: 199 F 199
Sbjct: 315 M 315
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 38/149 (25%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T+ P + G KI+ ++ G G H ++ ++ G+V+ WG+ G QLG G+ +
Sbjct: 62 TGDNQSTIVPKKLEALCGKKISSLSYGSGPHVVLCTEDGEVYAWGHNGYSQLGNGTTNQG 121
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
+ TP + LL+++ V E+ACG HS ++ G L
Sbjct: 122 I-TPVQVC----------TNLLIKK-------------VVEVACGSHHSMALSMDGDLYA 157
Query: 313 FGWGLYGQ-------------RMAKCLAG 328
+G+ GQ R++ CL G
Sbjct: 158 WGYNNCGQVGSGSTANQPTPRRVSNCLQG 186
>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
Length = 4725
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3090
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3091 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 57/123 (46%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTLPL-EEPK 540
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I SGK G +V IACG +SA +T G L T+G G
Sbjct: 541 VISAF--------------------SGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGN 580
Query: 318 YGQ 320
YG+
Sbjct: 581 YGR 583
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 3918 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 3968
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 3969 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4011
Query: 319 GQ 320
G+
Sbjct: 4012 GR 4013
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4096 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4154
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4155 CTEDGEVYTWG 4165
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 86/226 (38%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 3933 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 3992
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV + G ++
Sbjct: 3993 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEVLQGHRV 4036
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A +G TL L+D VW WG G G+LG G + G P
Sbjct: 4037 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4079
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4080 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4117
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 102/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G K V CG ++ A + G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTLPLEEP---KVISAFSGKQGGKHVVHIACGSTYSAAITAEGEL 573
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 674
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 735 GSNDQCQHFDTLRVTK-PEPTALPGLD 760
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 67/168 (39%), Gaps = 22/168 (13%)
Query: 92 GETPEPFPLPTEAS-VVKAAA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
G P P + +S VVK A G H ++T G+V++WG D G G
Sbjct: 3032 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG----------EGDDGKLG 3081
Query: 148 SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTL 201
F + + K + + A TSS E GD L
Sbjct: 3082 HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 3141
Query: 202 SPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGYGGEGQLGLG 247
P +V + G ++ +VA G R TL L+D G V+ WG G G+LG G
Sbjct: 3142 KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3035 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3093
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3094 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 3943 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 3994
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 3995 ACVTAAGDLYTWG 4007
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 595 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 653
Query: 261 CLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 654 KLQDLDVIKVRCGSQFSIALTKDGQVYSWGK 684
>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
Length = 4814
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3025 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3067
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3068 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3108
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4007 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4057
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 4058 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4100
Query: 319 GQ 320
G+
Sbjct: 4101 GR 4102
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 459 TLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 517
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I SGK +V IACG +SA +T G L T+G G
Sbjct: 518 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 557
Query: 318 YGQ 320
YG+
Sbjct: 558 YGR 560
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3012 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3070
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3071 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3115
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3116 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3168
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3169 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3227
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTDAG + +G
Sbjct: 3228 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDAGQVYAWGDND 3263
Query: 318 YGQR 321
+GQ+
Sbjct: 3264 HGQQ 3267
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 636 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 694
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 695 GSTHCLALTEDSEVHSWG 712
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4185 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4243
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4244 CTEDGEVYTWG 4254
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 104/274 (37%), Gaps = 49/274 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
GG A + GK+ G A + S G P P + +S VVK A G
Sbjct: 2976 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3033
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++T G+V++WG D G G F + + K + + A
Sbjct: 3034 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3083
Query: 173 GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
TSS E GD L P +V + G ++ +VA G R T
Sbjct: 3084 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3143
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L L+D G V+ WG G G+LG G + G + P + + +N G
Sbjct: 3144 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3184
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
V +I CG + S +T +G + T+G G Y
Sbjct: 3185 ------VCQIECGAQFSLALTKSGVVWTWGKGDY 3212
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 494 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 550
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 551 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 601
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 602 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 651
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 652 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 711
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 712 GSNDQCQHFDTLRVTK-PEPAALPGLD 737
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4022 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4081
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4082 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4125
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
VA +G TL L+D VW WG G G+LG G + G P
Sbjct: 4126 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4168
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4169 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4206
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4032 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4083
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4084 ACVTAAGDLYTWG 4096
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3218 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT 3271
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 572 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 630
Query: 261 CLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 631 KLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 661
>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Nomascus leucogenys]
Length = 4530
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 2743 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 2785
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 2786 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 2826
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 3723 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 3773
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 3774 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 3816
Query: 319 GQ 320
G+
Sbjct: 3817 GR 3818
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 436 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 494
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I SGK +V IACG +SA +T G L T+G G
Sbjct: 495 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 534
Query: 318 YGQ 320
YG+
Sbjct: 535 YGR 537
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 2730 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 2788
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 2789 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 2833
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 2834 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2886
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 2887 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 2945
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD+G + +G
Sbjct: 2946 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDSGQVYAWGDND 2981
Query: 318 YGQR 321
+GQ+
Sbjct: 2982 HGQQ 2985
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 3901 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3959
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 3960 CTEDGEVYTWG 3970
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 104/274 (37%), Gaps = 49/274 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
GG A + GK+ G A + S G P P + +S VVK A G
Sbjct: 2694 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 2751
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++T G+V++WG D G G F + + K + + A
Sbjct: 2752 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 2801
Query: 173 GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
TSS E GD L P +V + G ++ +VA G R T
Sbjct: 2802 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 2861
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L L+D G V+ WG G G+LG G + G + P + + +N G
Sbjct: 2862 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 2902
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
V +I CG + S +T +G + T+G G Y
Sbjct: 2903 ------VCQIECGAQFSLALTKSGVVWTWGKGDY 2930
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 3738 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 3797
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 3798 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 3841
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A +G TL L+D VW WG G G+LG G + G P
Sbjct: 3842 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 3884
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 3885 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 3922
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 3748 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 3799
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 3800 ACVTAAGDLYTWG 3812
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 2936 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 2989
>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
mulatta]
Length = 4840
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3089
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3090 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4058 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4108
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 4109 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4151
Query: 319 GQ 320
G+
Sbjct: 4152 GR 4153
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 539
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I SGK +V IACG +SA +T G L T+G G
Sbjct: 540 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 579
Query: 318 YGQ 320
YG+
Sbjct: 580 YGR 582
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3034 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3092
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3093 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3137
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3138 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3191 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3249
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD+G + +G
Sbjct: 3250 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDSGQVYAWGDND 3285
Query: 318 YGQR 321
+GQ+
Sbjct: 3286 HGQQ 3289
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4236 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4294
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4295 CTEDGEVYTWG 4305
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 104/274 (37%), Gaps = 49/274 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
GG A + GK+ G A + S G P P + +S VVK A G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3055
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++T G+V++WG D G G F + + K + + A
Sbjct: 3056 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3105
Query: 173 GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
TSS E GD L P +V + G ++ +VA G R T
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3165
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L L+D G V+ WG G G+LG G + G + P + + +N G
Sbjct: 3166 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3206
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
V +I CG + S +T +G + T+G G Y
Sbjct: 3207 ------VCQIECGAQFSLALTKSGVVWTWGKGDY 3234
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 516 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 572
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 623
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 624 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 734 GSNDQCQHFDTLRVTK-PEPAALPGLD 759
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4073 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4132
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4133 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4176
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A +G TL L+D VW WG G G+LG G + G P
Sbjct: 4177 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4219
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4220 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4257
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4083 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4134
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4135 ACVTAAGDLYTWG 4147
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3240 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3293
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 86/212 (40%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
++VK AA H +++ GEVY+WG G G G +P
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 535
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 593
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 594 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 651
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 683
>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3089
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3090 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4077
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 4078 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4120
Query: 319 GQ 320
G+
Sbjct: 4121 GR 4122
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 539
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I SGK +V IACG +SA +T G L T+G G
Sbjct: 540 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 579
Query: 318 YGQ 320
YG+
Sbjct: 580 YGR 582
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3034 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3092
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3093 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3137
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3138 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3191 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3249
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD+G + +G
Sbjct: 3250 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDSGQVYAWGDND 3285
Query: 318 YGQR 321
+GQ+
Sbjct: 3286 HGQQ 3289
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4264 CTEDGEVYTWG 4274
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 104/274 (37%), Gaps = 49/274 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
GG A + GK+ G A + S G P P + +S VVK A G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3055
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++T G+V++WG D G G F + + K + + A
Sbjct: 3056 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3105
Query: 173 GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
TSS E GD L P +V + G ++ +VA G R T
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3165
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L L+D G V+ WG G G+LG G + G + P + + +N G
Sbjct: 3166 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3206
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
V +I CG + S +T +G + T+G G Y
Sbjct: 3207 ------VCQIECGAQFSLALTKSGVVWTWGKGDY 3234
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 516 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 572
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 623
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 624 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 734 GSNDQCQHFDTLRVTK-PEPAALPGLD 759
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4101
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4102 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4145
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A +G TL L+D VW WG G G+LG G + G P
Sbjct: 4146 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4188
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4189 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4226
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4052 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4104 ACVTAAGDLYTWG 4116
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3240 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3293
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 86/212 (40%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
++VK AA H +++ GEVY+WG G G G +P
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 535
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 593
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 594 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 651
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 683
>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3089
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3090 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4077
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 4078 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4120
Query: 319 GQ 320
G+
Sbjct: 4121 GR 4122
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 539
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I SGK +V IACG +SA +T G L T+G G
Sbjct: 540 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 579
Query: 318 YGQ 320
YG+
Sbjct: 580 YGR 582
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3034 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3092
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3093 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3137
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3138 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3191 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3249
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD+G + +G
Sbjct: 3250 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDSGQVYAWGDND 3285
Query: 318 YGQR 321
+GQ+
Sbjct: 3286 HGQQ 3289
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4264 CTEDGEVYTWG 4274
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 104/274 (37%), Gaps = 49/274 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
GG A + GK+ G A + S G P P + +S VVK A G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3055
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++T G+V++WG D G G F + + K + + A
Sbjct: 3056 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3105
Query: 173 GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
TSS E GD L P +V + G ++ +VA G R T
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3165
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L L+D G V+ WG G G+LG G + G + P + + +N G
Sbjct: 3166 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3206
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
V +I CG + S +T +G + T+G G Y
Sbjct: 3207 ------VCQIECGAQFSLALTKSGVVWTWGKGDY 3234
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 516 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 572
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 623
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 624 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 734 GSNDQCQHFDTLRVTK-PEPAALPGLD 759
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4101
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4102 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4145
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A +G TL L+D VW WG G G+LG G + G P
Sbjct: 4146 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4188
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4189 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4226
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4052 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4104 ACVTAAGDLYTWG 4116
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3240 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3293
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 86/212 (40%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
++VK AA H +++ GEVY+WG G G G +P
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 535
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 593
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 594 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 651
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 683
>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Papio anubis]
Length = 4123
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 2336 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 2378
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 2379 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 2419
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 3316 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 3366
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 3367 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 3409
Query: 319 GQ 320
G+
Sbjct: 3410 GR 3411
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 2323 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 2381
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 2382 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 2426
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 2427 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2479
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 2480 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 2538
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD+G + +G
Sbjct: 2539 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDSGQVYAWGDND 2574
Query: 318 YGQR 321
+GQ+
Sbjct: 2575 HGQQ 2578
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 3494 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3552
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 3553 CTEDGEVYTWG 3563
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 3331 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 3390
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 3391 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 3434
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A +G TL L+D VW WG G G+LG G + G P
Sbjct: 3435 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 3477
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 3478 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 3515
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 3341 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 3392
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 3393 ACVTAAGDLYTWG 3405
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 2529 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 2582
>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4829
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3042 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3084
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3085 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3125
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4022 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4072
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 4073 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4115
Query: 319 GQ 320
G+
Sbjct: 4116 GR 4117
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 539
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I SGK +V IACG +SA +T G L T+G G
Sbjct: 540 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 579
Query: 318 YGQ 320
YG+
Sbjct: 580 YGR 582
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3029 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3087
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3088 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3132
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3133 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3185
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3186 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3244
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD+G + +G
Sbjct: 3245 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDSGQVYAWGDND 3280
Query: 318 YGQR 321
+GQ+
Sbjct: 3281 HGQQ 3284
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4200 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4258
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4259 CTEDGEVYTWG 4269
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 104/274 (37%), Gaps = 49/274 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
GG A + GK+ G A + S G P P + +S VVK A G
Sbjct: 2993 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3050
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++T G+V++WG D G G F + + K + + A
Sbjct: 3051 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3100
Query: 173 GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
TSS E GD L P +V + G ++ +VA G R T
Sbjct: 3101 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3160
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L L+D G V+ WG G G+LG G + G + P + + +N G
Sbjct: 3161 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3201
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
V +I CG + S +T +G + T+G G Y
Sbjct: 3202 ------VCQIECGAQFSLALTKSGVVWTWGKGDY 3229
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 516 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 572
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 623
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 624 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 734 GSNDQCQHFDTLRVTK-PEPAALPGLD 759
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4037 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4096
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4097 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4140
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A +G TL L+D VW WG G G+LG G + G P
Sbjct: 4141 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4183
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4184 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4221
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4047 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4098
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4099 ACVTAAGDLYTWG 4111
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3235 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3288
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 86/212 (40%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
++VK AA H +++ GEVY+WG G G G +P
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 535
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 593
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 594 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 651
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 683
>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
musculus]
Length = 4902
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3114 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3156
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3157 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3197
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4095 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4145
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 4146 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4188
Query: 319 GQ 320
G+
Sbjct: 4189 GR 4190
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 55/122 (45%), Gaps = 23/122 (18%)
Query: 201 LSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
L+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P +
Sbjct: 551 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPKV 609
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
I SGK +V IACG +SA +T G L T+G G Y
Sbjct: 610 ISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNY 649
Query: 319 GQ 320
G+
Sbjct: 650 GR 651
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3101 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3159
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3160 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3204
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3205 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3257
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3258 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3316
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD+G + +G
Sbjct: 3317 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDSGQVYAWGDND 3352
Query: 318 YGQR 321
+GQ+
Sbjct: 3353 HGQQ 3356
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 727 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 785
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 786 GSTHCLALTEDSEVHSWG 803
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4273 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4331
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4332 CTEDGEVYTWG 4342
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 108/280 (38%), Gaps = 61/280 (21%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG--ETPEPFPLPTEAS-----VVKA 109
GG A + GK+ + G A T+G+ G + P+P + + VVK
Sbjct: 3065 AGGSKSLFAVTVEGKVYSCGEA--------TNGRLGLGMSSGTVPIPRQITALSSYVVKK 3116
Query: 110 AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
A G H ++T G+V++WG D G G F + + K + +
Sbjct: 3117 VAVHSGGRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3166
Query: 167 PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
A TSS E GD L P +V + G ++ +VA G
Sbjct: 3167 RIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3226
Query: 221 GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
R TL L+D G V+ WG G G+LG G + G + P + +
Sbjct: 3227 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 3268
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+N G V +I CG + S +T +G + T+G G Y
Sbjct: 3269 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDY 3301
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 585 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 641
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 642 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 692
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 693 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 742
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 743 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 802
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 803 GSNDQCQHFDTLRVTK-PEPTALPGLD 828
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4110 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4169
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4170 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4213
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A +G TL L+D VW WG G G+LG G + G P
Sbjct: 4214 IDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4256
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4257 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4294
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4120 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4171
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4172 ACVTAAGDLYTWG 4184
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3307 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3360
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 86/212 (40%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
++VK AA H +++ GEVY+WG G G G +P
Sbjct: 563 NIVKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 604
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 605 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 662
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 663 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 720
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 721 EKLQDLDVIKVRCGSQFSIALTKDGQVYSWGK 752
>gi|428177727|gb|EKX46605.1| hypothetical protein GUITHDRAFT_48927, partial [Guillardia theta
CCMP2712]
Length = 316
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 70/163 (42%), Gaps = 40/163 (24%)
Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
+E++E+P F GV V+ GG HT+++S+ G+V+ WG G GQLG
Sbjct: 66 QEQTEHPTFVGSLF-----------GVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLG 114
Query: 246 LGSRIKMVPTPHLIPCLE-----HAASGKDRPLLVRQGSV------NSSGKAGRSY---- 290
GSR + TP ++ + G ++V G N +G+ G
Sbjct: 115 HGSRDNL-TTPSVVQAMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKNGQCGVGSTSDL 173
Query: 291 -------------VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V+ +CG H+AVVT G + TFG G GQ
Sbjct: 174 LSPQCVESLRGEGVQHASCGAGHTAVVTGGGEVFTFGSGSCGQ 216
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 89/227 (39%), Gaps = 8/227 (3%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDE 81
VY WG E+ +P + G +DV G A+ SG+++ WG +
Sbjct: 1 VYFWGQAGSAVGEQVSSSTPRMLKKAMGRQVRDVACGLVHSAMVMG-SGEVLCWGE-NKY 58
Query: 82 GQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTR 141
GQ + + E P + + + G AH V V+E G V++WG +R
Sbjct: 59 GQCGTGTQEQTEHPTFVGSLFGVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHGSR 118
Query: 142 DFGSAGSFQKDSTGKQS-ALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
D + S + G+ A+ AG E+ + ++ G
Sbjct: 119 DNLTTPSVVQAMRGRDVLAVTCGVGHTVIVLAGGELY-----TCGWNKNGQCGVGSTSDL 173
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
LSP V G + + G HT +++ G+V+ +G G GQLG G
Sbjct: 174 LSPQCVESLRGEGVQHASCGAGHTAVVTGGGEVFTFGSGSCGQLGHG 220
>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3089
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3090 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4077
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 4078 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4120
Query: 319 GQ 320
G+
Sbjct: 4121 GR 4122
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 539
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I SGK +V IACG +SA +T G L T+G G
Sbjct: 540 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 579
Query: 318 YGQ 320
YG+
Sbjct: 580 YGR 582
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3034 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3092
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3093 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3137
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3138 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3191 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3249
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD+G + +G
Sbjct: 3250 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDSGQVYAWGDND 3285
Query: 318 YGQR 321
+GQ+
Sbjct: 3286 HGQQ 3289
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4264 CTEDGEVYTWG 4274
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 104/274 (37%), Gaps = 49/274 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
GG A + GK+ G A + S G P P + +S VVK A G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3055
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++T G+V++WG D G G F + + K + + A
Sbjct: 3056 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3105
Query: 173 GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
TSS E GD L P +V + G ++ +VA G R T
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3165
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L L+D G V+ WG G G+LG G + G + P + + +N G
Sbjct: 3166 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3206
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
V +I CG + S +T +G + T+G G Y
Sbjct: 3207 ------VCQIECGAQFSLALTKSGVVWTWGKGDY 3234
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 516 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 572
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 623
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 624 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 734 GSNDQCQHFDTLRVTK-PEPAALPGLD 759
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4101
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4102 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4145
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A +G TL L+D VW WG G G+LG G + G P
Sbjct: 4146 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4188
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4189 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4226
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4052 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4104 ACVTAAGDLYTWG 4116
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3240 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3293
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 86/212 (40%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
++VK AA H +++ GEVY+WG G G G +P
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 535
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 593
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 594 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 651
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 683
>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3089
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3090 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4077
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 4078 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4120
Query: 319 GQ 320
G+
Sbjct: 4121 GR 4122
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 539
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I SGK +V IACG +SA +T G L T+G G
Sbjct: 540 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 579
Query: 318 YGQ 320
YG+
Sbjct: 580 YGR 582
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3034 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3092
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3093 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3137
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3138 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3191 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3249
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD+G + +G
Sbjct: 3250 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDSGQVYAWGDND 3285
Query: 318 YGQR 321
+GQ+
Sbjct: 3286 HGQQ 3289
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4264 CTEDGEVYTWG 4274
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 104/274 (37%), Gaps = 49/274 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
GG A + GK+ G A + S G P P + +S VVK A G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3055
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++T G+V++WG D G G F + + K + + A
Sbjct: 3056 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3105
Query: 173 GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
TSS E GD L P +V + G ++ +VA G R T
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3165
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L L+D G V+ WG G G+LG G + G + P + + +N G
Sbjct: 3166 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3206
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
V +I CG + S +T +G + T+G G Y
Sbjct: 3207 ------VCQIECGAQFSLALTKSGVVWTWGKGDY 3234
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 516 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 572
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 623
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 624 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 734 GSNDQCQHFDTLRVTK-PEPAALPGLD 759
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4101
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4102 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4145
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A +G TL L+D VW WG G G+LG G + G P
Sbjct: 4146 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4188
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4189 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4226
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4052 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4104 ACVTAAGDLYTWG 4116
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3240 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3293
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 86/212 (40%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
++VK AA H +++ GEVY+WG G G G +P
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 535
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 593
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 594 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 651
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 683
>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4834
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3089
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3090 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4077
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 4078 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4120
Query: 319 GQ 320
G+
Sbjct: 4121 GR 4122
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 539
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I SGK +V IACG +SA +T G L T+G G
Sbjct: 540 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 579
Query: 318 YGQ 320
YG+
Sbjct: 580 YGR 582
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3034 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3092
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3093 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3137
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3138 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3191 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3249
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD+G + +G
Sbjct: 3250 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDSGQVYAWGDND 3285
Query: 318 YGQR 321
+GQ+
Sbjct: 3286 HGQQ 3289
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4264 CTEDGEVYTWG 4274
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 104/274 (37%), Gaps = 49/274 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
GG A + GK+ G A + S G P P + +S VVK A G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3055
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++T G+V++WG D G G F + + K + + A
Sbjct: 3056 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3105
Query: 173 GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
TSS E GD L P +V + G ++ +VA G R T
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3165
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L L+D G V+ WG G G+LG G + G + P + + +N G
Sbjct: 3166 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3206
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
V +I CG + S +T +G + T+G G Y
Sbjct: 3207 ------VCQIECGAQFSLALTKSGVVWTWGKGDY 3234
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 516 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 572
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 623
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 624 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 734 GSNDQCQHFDTLRVTK-PEPAALPGLD 759
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4101
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4102 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4145
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A +G TL L+D VW WG G G+LG G + G P
Sbjct: 4146 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4188
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4189 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4226
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4052 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4104 ACVTAAGDLYTWG 4116
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3240 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3293
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 86/212 (40%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
++VK AA H +++ GEVY+WG G G G +P
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 535
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 593
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 594 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 651
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 683
>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3089
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3090 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4077
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 4078 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4120
Query: 319 GQ 320
G+
Sbjct: 4121 GR 4122
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 539
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I SGK +V IACG +SA +T G L T+G G
Sbjct: 540 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 579
Query: 318 YGQ 320
YG+
Sbjct: 580 YGR 582
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3034 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3092
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3093 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3137
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3138 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3191 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3249
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD+G + +G
Sbjct: 3250 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDSGQVYAWGDND 3285
Query: 318 YGQR 321
+GQ+
Sbjct: 3286 HGQQ 3289
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4264 CTEDGEVYTWG 4274
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 104/274 (37%), Gaps = 49/274 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
GG A + GK+ G A + S G P P + +S VVK A G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3055
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++T G+V++WG D G G F + + K + + A
Sbjct: 3056 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3105
Query: 173 GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
TSS E GD L P +V + G ++ +VA G R T
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3165
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L L+D G V+ WG G G+LG G + G + P + + +N G
Sbjct: 3166 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3206
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
V +I CG + S +T +G + T+G G Y
Sbjct: 3207 ------VCQIECGAQFSLALTKSGVVWTWGKGDY 3234
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 516 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 572
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 623
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 624 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 734 GSNDQCQHFDTLRVTK-PEPAALPGLD 759
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4101
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4102 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4145
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A +G TL L+D VW WG G G+LG G + G P
Sbjct: 4146 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4188
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4189 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4226
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4052 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4104 ACVTAAGDLYTWG 4116
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3240 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3293
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 86/212 (40%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
++VK AA H +++ GEVY+WG G G G +P
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 535
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 593
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 594 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 651
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 683
>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
Length = 4836
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3090
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3091 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 60/121 (49%), Gaps = 27/121 (22%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4029 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4079
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
PC DRP ++ + V ++A GG HSA VT AG L T+G G YG
Sbjct: 4080 PC--------DRPRVIE--------SLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123
Query: 320 Q 320
+
Sbjct: 4124 R 4124
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 540
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I SGK +V IACG +SA +T G L T+G G
Sbjct: 541 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 580
Query: 318 YGQ 320
YG+
Sbjct: 581 YGR 583
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3035 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3093
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3094 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3138
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3139 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3192 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3250
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTDAG + +G
Sbjct: 3251 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDAGQVYAWGDND 3286
Query: 318 YGQR 321
+GQ+
Sbjct: 3287 HGQQ 3290
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4207 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265
Query: 119 VTEAGEVYTWG 129
+E GEVYTWG
Sbjct: 4266 CSEDGEVYTWG 4276
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 104/274 (37%), Gaps = 49/274 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
GG A + GK+ G A + S G P P + +S VVK A G
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3056
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++T G+V++WG D G G F + + K + + A
Sbjct: 3057 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3106
Query: 173 GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
TSS E GD L P +V + G ++ +VA G R T
Sbjct: 3107 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3166
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L L+D G V+ WG G G+LG G + G + P + + +N G
Sbjct: 3167 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3207
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
V +I CG + S +T +G + T+G G Y
Sbjct: 3208 ------VCQIECGAQFSLALTKSGVVWTWGKGDY 3235
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 573
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 674
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 735 GSNDQCQHFDTLRVTK-PEPSALPGLD 760
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGA 4103
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4104 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4147
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
VA +G TL L+D VW WG G G+LG G + G P
Sbjct: 4148 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4190
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4191 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4228
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4054 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHS 4105
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4106 ACVTAAGDLYTWG 4118
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3241 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT 3294
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 86/212 (40%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
++VK AA H +++ GEVY+WG G G G +P
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 536
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 594
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 595 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 652
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 653 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 684
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G K+ +A G H + S+ G+V+ WG EGQLG G+ + P L+ L+
Sbjct: 4250 GKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGT-TNAIQRPRLVAALQ 4301
>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
[Equus caballus]
Length = 4840
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3051 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3093
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3094 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3134
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 60/121 (49%), Gaps = 27/121 (22%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4033 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4083
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
PC DRP ++ G V ++A GG HSA VT AG L T+G G YG
Sbjct: 4084 PC--------DRPRVIE-------SLRGIELV-DVAAGGAHSACVTAAGDLYTWGKGRYG 4127
Query: 320 Q 320
+
Sbjct: 4128 R 4128
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 540
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I SGK +V IACG +SA +T G L T+G G
Sbjct: 541 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 580
Query: 318 YGQ 320
YG+
Sbjct: 581 YGR 583
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3038 PIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3096
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3097 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3141
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3142 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3194
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3195 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3253
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTDAG + +G
Sbjct: 3254 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDAGQVYAWGDND 3289
Query: 318 YGQR 321
+GQ+
Sbjct: 3290 HGQQ 3293
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4211 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4269
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4270 CTEDGEVYTWG 4280
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 107/280 (38%), Gaps = 61/280 (21%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
GG A + GK+ G A T+G+ G + P+P + + VVK
Sbjct: 3002 AGGSKSLFAVTVEGKVYACGEA--------TNGRLGLGISSGTVPIPRQVTALSSYVVKK 3053
Query: 110 AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
A G H ++T G+V++WG D G G F + + K + +
Sbjct: 3054 VAVHSGGRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3103
Query: 167 PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
A TSS E GD L P +V + G ++ +VA G
Sbjct: 3104 RIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3163
Query: 221 GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
R TL L+D G V+ WG G G+LG G + G + P + +
Sbjct: 3164 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 3205
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+N G V +I CG + S +T +G + T+G G Y
Sbjct: 3206 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDY 3238
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 573
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAVPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 674
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 735 GSNDQCQHFDTLRVTK-PEPSALPGLD 760
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4048 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIELVDVAAGGA 4107
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4108 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4151
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
VA +G TL L+D VW WG G G+LG G + G P
Sbjct: 4152 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4194
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4195 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4232
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G K+ +A G H + ++ G+V+ WG EGQLG G+ + P L+P L+
Sbjct: 4254 GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT-TNAIQRPRLVPALQ 4305
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3244 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT 3297
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 595 PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 653
Query: 261 CLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 654 KLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 684
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ +V AAG AH
Sbjct: 4058 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHS 4109
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4110 ACVTAAGDLYTWG 4122
>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
catus]
Length = 4844
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3055 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3097
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3098 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3138
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4037 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4087
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 4088 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4130
Query: 319 GQ 320
G+
Sbjct: 4131 GR 4132
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 540
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I SGK +V IACG +SA +T G L T+G G
Sbjct: 541 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 580
Query: 318 YGQ 320
YG+
Sbjct: 581 YGR 583
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3042 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3100
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3101 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3145
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3146 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3198
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3199 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3257
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTDAG + +G
Sbjct: 3258 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDAGQVYAWGDND 3293
Query: 318 YGQR 321
+GQ+
Sbjct: 3294 HGQQ 3297
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4215 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4273
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4274 CTEDGEVYTWG 4284
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 104/274 (37%), Gaps = 49/274 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
GG A + GK+ G A + S G P P + +S VVK A G
Sbjct: 3006 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3063
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++T G+V++WG D G G F + + K + + A
Sbjct: 3064 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3113
Query: 173 GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
TSS E GD L P +V + G ++ +VA G R T
Sbjct: 3114 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3173
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L L+D G V+ WG G G+LG G + G + P + + +N G
Sbjct: 3174 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3214
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
V +I CG + S +T +G + T+G G Y
Sbjct: 3215 ------VCQIECGAQFSLALTKSGVVWTWGKGDY 3242
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 573
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPVLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 674
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 735 GSNDQCQHFDTLRVTK-PEPAALPGLD 760
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 84/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4052 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4111
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G +
Sbjct: 4112 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHHV 4155
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
VA +G TL L+D VW WG G G+LG G + G P
Sbjct: 4156 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4198
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4199 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4236
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4062 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4113
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4114 ACVTAAGDLYTWG 4126
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3248 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT 3301
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 86/212 (40%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
++VK AA H +++ GEVY+WG G G G +P
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 536
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 594
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 595 -PVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 652
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 653 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 684
>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4834
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3089
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3090 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4077
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 4078 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4120
Query: 319 GQ 320
G+
Sbjct: 4121 GR 4122
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 539
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I SGK +V IACG +SA +T G L T+G G
Sbjct: 540 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 579
Query: 318 YGQ 320
YG+
Sbjct: 580 YGR 582
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3034 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3092
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3093 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3137
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3138 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3191 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3249
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD+G + +G
Sbjct: 3250 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDSGQVYAWGDND 3285
Query: 318 YGQR 321
+GQ+
Sbjct: 3286 HGQQ 3289
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4264 CTEDGEVYTWG 4274
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 104/274 (37%), Gaps = 49/274 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
GG A + GK+ G A + S G P P + +S VVK A G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3055
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++T G+V++WG D G G F + + K + + A
Sbjct: 3056 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3105
Query: 173 GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
TSS E GD L P +V + G ++ +VA G R T
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3165
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L L+D G V+ WG G G+LG G + G + P + + +N G
Sbjct: 3166 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3206
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
V +I CG + S +T +G + T+G G Y
Sbjct: 3207 ------VCQIECGAQFSLALTKSGVVWTWGKGDY 3234
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 516 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 572
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 623
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 624 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 734 GSNDQCQHFDTLRVTK-PEPAALPGLD 759
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4101
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4102 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4145
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A +G TL L+D VW WG G G+LG G + G P
Sbjct: 4146 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4188
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4189 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4226
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4052 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4104 ACVTAAGDLYTWG 4116
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3240 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3293
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 87/212 (41%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
++VK AA H +++ GEVY+WG C G G G +P
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWG---C----------GDGGRL-----GHGDTVPL 535
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 593
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 594 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 651
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 683
>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
Length = 4834
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3089
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3090 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4077
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 4078 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4120
Query: 319 GQ 320
G+
Sbjct: 4121 GR 4122
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 539
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I SGK +V IACG +SA +T G L T+G G
Sbjct: 540 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 579
Query: 318 YGQ 320
YG+
Sbjct: 580 YGR 582
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3034 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3092
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3093 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3137
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3138 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3191 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3249
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD+G + +G
Sbjct: 3250 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDSGQVYAWGDND 3285
Query: 318 YGQR 321
+GQ+
Sbjct: 3286 HGQQ 3289
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4264 CTEDGEVYTWG 4274
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 104/274 (37%), Gaps = 49/274 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
GG A + GK+ G A + S G P P + +S VVK A G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3055
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++T G+V++WG D G G F + + K + + A
Sbjct: 3056 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3105
Query: 173 GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
TSS E GD L P +V + G ++ +VA G R T
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3165
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L L+D G V+ WG G G+LG G + G + P + + +N G
Sbjct: 3166 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3206
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
V +I CG + S +T +G + T+G G Y
Sbjct: 3207 ------VCQIECGAQFSLALTKSGVVWTWGKGDY 3234
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 516 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 572
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 623
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 624 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 734 GSNDQCQHFDTLRVTK-PEPAALPGLD 759
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4101
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4102 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4145
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A +G TL L+D VW WG G G+LG G + G P
Sbjct: 4146 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4188
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4189 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4226
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4052 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4104 ACVTAAGDLYTWG 4116
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3240 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3293
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 87/212 (41%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
++VK AA H +++ GEVY+WG C G G G +P
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWG---C----------GDGGRL-----GHGDTVPL 535
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 593
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 594 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 651
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 683
>gi|405976795|gb|EKC41279.1| Regulator of chromosome condensation [Crassostrea gigas]
Length = 443
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 19/220 (8%)
Query: 67 SESGKLITWGSADD-EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEV 125
++ GK+ WG+ D G+ LTS E P LP E +V+K A+G H + +TE GE+
Sbjct: 160 TDEGKVFAWGNFRDANGKIGLTSDGIQEKPIEM-LPGE-TVIKIASGGDHLLCLTEKGEI 217
Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQ-KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
Y+ G E +V F G + D K + + + + ++V + S
Sbjct: 218 YSCGCAEQGQLGRVAECFSVRGGRKGLDYILKPAIIRCLRHKSKKRVVFDDVYAGQYMSY 277
Query: 185 AREESENPASG---DEFFTLS---------PCLV-TLNPGVKITKVAAGGRHTLILSDMG 231
ARE+ + ++ L P V ++ VK+T V AG H + L G
Sbjct: 278 AREKDTGSIYAWGLNNYYQLGTNDLENKFVPVYVKAMSEDVKVTMVDAGQHHAICLDTAG 337
Query: 232 QVWGWGYGGEGQLGLG--SRIKMVPTPHLIPCLEHAASGK 269
+V+ G G G+LG G + K VP +P + A+G+
Sbjct: 338 KVYTVGRGEYGRLGHGDSNEEKRVPAILDLPPCKQVAAGQ 377
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 30/154 (19%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT-PHLIPC 261
P LV ++ KI AGG HT+ L++ G+V+ +G EG LG + + T P +
Sbjct: 84 PALVNIDDQ-KIVSAVAGGMHTVCLTNKGEVYTFGCNDEGALGRNTSEEGSETLPSKVDL 142
Query: 262 L----EHAASGKDRPLLVRQGSV-------NSSGKAGRS---------------YVKEIA 295
L + +A +L +G V +++GK G + V +IA
Sbjct: 143 LGRGIQLSAGDSHTAVLTDEGKVFAWGNFRDANGKIGLTSDGIQEKPIEMLPGETVIKIA 202
Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQ--RMAKCLA 327
GG H +T+ G + + G GQ R+A+C +
Sbjct: 203 SGGDHLLCLTEKGEIYSCGCAEQGQLGRVAECFS 236
>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
norvegicus]
Length = 4779
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 2991 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3033
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3034 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3074
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 3972 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4022
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 4023 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4065
Query: 319 GQ 320
G+
Sbjct: 4066 GR 4067
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 55/122 (45%), Gaps = 23/122 (18%)
Query: 201 LSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
L+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P +
Sbjct: 428 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPKV 486
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
I SGK +V IACG +SA +T G L T+G G Y
Sbjct: 487 ISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNY 526
Query: 319 GQ 320
G+
Sbjct: 527 GR 528
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 2978 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3036
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3037 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3081
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3082 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3134
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3135 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3193
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD+G + +G
Sbjct: 3194 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDSGQVYAWGDND 3229
Query: 318 YGQR 321
+GQ+
Sbjct: 3230 HGQQ 3233
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 604 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 662
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 663 GSTHCLALTEDSEVHSWG 680
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4150 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4208
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4209 CTEDGEVYTWG 4219
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 108/280 (38%), Gaps = 61/280 (21%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG--ETPEPFPLPTEAS-----VVKA 109
GG A + GK+ + G A T+G+ G + P+P + + VVK
Sbjct: 2942 AGGSKSLFAVTVEGKVYSCGEA--------TNGRLGLGMSSGTVPIPRQITALSSYVVKK 2993
Query: 110 AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
A G H ++T G+V++WG D G G F + + K + +
Sbjct: 2994 VAVHSGGRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3043
Query: 167 PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
A TSS E GD L P +V + G ++ +VA G
Sbjct: 3044 RIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3103
Query: 221 GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
R TL L+D G V+ WG G G+LG G + G + P + +
Sbjct: 3104 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 3145
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+N G V +I CG + S +T +G + T+G G Y
Sbjct: 3146 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDY 3178
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 462 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 518
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 519 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 569
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 570 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 619
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 620 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 679
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 680 GSNDQCQHFDTLRVTK-PEPTALPGLD 705
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 3987 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4046
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4047 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4090
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A +G TL L+D VW WG G G+LG G + G P
Sbjct: 4091 IDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4133
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4134 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4171
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 3997 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4048
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4049 ACVTAAGDLYTWG 4061
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3184 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3237
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 86/212 (40%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
++VK AA H +++ GEVY+WG G G G +P
Sbjct: 440 NIVKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 481
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 482 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 539
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 540 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 597
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 598 EKLQDLDVIKVRCGSQFSIALTKDGQVYSWGK 629
>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Pan paniscus]
Length = 4839
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3052 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3094
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3095 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3135
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4032 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4082
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 4083 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4125
Query: 319 GQ 320
G+
Sbjct: 4126 GR 4127
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 427 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 485
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I SGK +V IACG +SA +T G L T+G G
Sbjct: 486 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 525
Query: 318 YGQ 320
YG+
Sbjct: 526 YGR 528
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3039 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3097
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3098 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3142
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3143 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3195
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3196 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3254
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD+G + +G
Sbjct: 3255 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDSGQVYAWGDND 3290
Query: 318 YGQR 321
+GQ+
Sbjct: 3291 HGQQ 3294
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 604 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 662
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 663 GSTHCLALTEDSEVHSWG 680
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4210 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4268
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4269 CTEDGEVYTWG 4279
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 104/274 (37%), Gaps = 49/274 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
GG A + GK+ G A + S G P P + +S VVK A G
Sbjct: 3003 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3060
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++T G+V++WG D G G F + + K + + A
Sbjct: 3061 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3110
Query: 173 GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
TSS E GD L P +V + G ++ +VA G R T
Sbjct: 3111 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3170
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L L+D G V+ WG G G+LG G + G + P + + +N G
Sbjct: 3171 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3211
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
V +I CG + S +T +G + T+G G Y
Sbjct: 3212 ------VCQIECGAQFSLALTKSGVVWTWGKGDY 3239
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 462 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 518
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 519 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 569
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 570 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 619
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 620 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 679
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 680 GSNDQCQHFDTLRVTK-PEPAALPGLD 705
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4047 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4106
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4107 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4150
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A +G TL L+D VW WG G G+LG G + G P
Sbjct: 4151 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4193
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4194 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4231
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4057 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4108
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4109 ACVTAAGDLYTWG 4121
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3245 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3298
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 86/212 (40%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
++VK AA H +++ GEVY+WG G G G +P
Sbjct: 440 NIVKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 481
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 482 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 539
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 540 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 597
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 598 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 629
>gi|85094575|ref|XP_959911.1| hypothetical protein NCU02267 [Neurospora crassa OR74A]
gi|28921368|gb|EAA30675.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|40804620|emb|CAF05880.1| conserved hypothetical protein [Neurospora crassa]
Length = 606
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 123/327 (37%), Gaps = 77/327 (23%)
Query: 22 VYMWGYLPG--TSPEKSPILSPIPARLCGGDS--WKDVCGGGCGFALATSESGKLITWGS 77
VY WG G +P+ + ++ P R+ D +D+ F A E G L+ WG
Sbjct: 119 VYAWGSNVGKVVAPDSNELVIKTPRRIAYFDDQVLRDL-KLDSNFGAAIDEKGNLVQWGV 177
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
D+ T G+ +VK + + GEVY+ +P A
Sbjct: 178 GFDKDHYKPTVTLKGK-----------DLVKLDLSRDRIIGLASNGEVYS------IPVA 220
Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAP-------PSDKRAGEEVVKRRK--------T 182
+ G QK++T S+L + QAP P + R GE++V R T
Sbjct: 221 AADQRAG-----QKETTASPSSLWSSQAPVNYRPLTPKNLRWGEKIVDVRSGLEHCLMLT 275
Query: 183 SSAREESENPASGDEFFTL-------------------SPCLVTLNPGVKITKVAAGGRH 223
S+ R S AS ++F + P VT G KI ++AAG H
Sbjct: 276 SNGRVFSA-AASSEDFPSKGQLGVPGLTWTNRPAGPYDQPHEVTGLSGSKIKEIAAGDYH 334
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
+L L G+V+ +G GQLG + EH RP+ + +
Sbjct: 335 SLALDTEGRVYAFGDNSFGQLGFENDT------------EHPYVDSPRPVPINKL---YH 379
Query: 284 GKAGRSYVKEIACGGRHSAVVTDAGAL 310
G R V IA GG +S DA A
Sbjct: 380 GTNLRPKVTYIAAGGPNSFFTVDARAF 406
>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
Length = 4835
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3046 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3088
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3089 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3129
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 60/121 (49%), Gaps = 27/121 (22%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4028 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4078
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
PC DRP ++ + V ++A GG HSA VT AG L T+G G YG
Sbjct: 4079 PC--------DRPRVIE--------SLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4122
Query: 320 Q 320
+
Sbjct: 4123 R 4123
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 540
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I SGK +V IACG +SA +T G L T+G G
Sbjct: 541 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 580
Query: 318 YGQ 320
YG+
Sbjct: 581 YGR 583
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3033 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3091
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3092 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3136
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3137 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3189
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3190 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3248
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTDAG + +G
Sbjct: 3249 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDAGQVYAWGDND 3284
Query: 318 YGQR 321
+GQ+
Sbjct: 3285 HGQQ 3288
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4206 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4264
Query: 119 VTEAGEVYTWG 129
+E GEVYTWG
Sbjct: 4265 CSEDGEVYTWG 4275
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 104/274 (37%), Gaps = 49/274 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
GG A + GK+ G A + S G P P + +S VVK A G
Sbjct: 2997 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3054
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++T G+V++WG D G G F + + K + + A
Sbjct: 3055 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3104
Query: 173 GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
TSS E GD L P +V + G ++ +VA G R T
Sbjct: 3105 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3164
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L L+D G V+ WG G G+LG G + G + P + + +N G
Sbjct: 3165 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3205
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
V +I CG + S +T +G + T+G G Y
Sbjct: 3206 ------VCQIECGAQFSLALTKSGVVWTWGKGDY 3233
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 573
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALT 674
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 735 GSNDQCQHFDTLRVTK-PEPSALPGLD 760
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4043 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGA 4102
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4103 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4146
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
VA +G TL L+D VW WG G G+LG G + G P
Sbjct: 4147 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4189
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4190 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4227
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4053 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHS 4104
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4105 ACVTAAGDLYTWG 4117
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3239 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT 3292
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 86/212 (40%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
++VK AA H +++ GEVY+WG G G G +P
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 536
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 594
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 595 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 652
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 653 EKLQDLDVVKVRCGSQFSVALTKDGQVYSWGK 684
Score = 37.4 bits (85), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G K+ +A G H + S+ G+V+ WG EGQLG G+ + P L+ L+
Sbjct: 4249 GKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGT-TNAIQRPRLVAALQ 4300
>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
Length = 4837
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3090
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3091 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 60/121 (49%), Gaps = 27/121 (22%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4030 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4080
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
PC DRP ++ + V ++A GG HSA VT AG L T+G G YG
Sbjct: 4081 PC--------DRPRVIE--------SLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4124
Query: 320 Q 320
+
Sbjct: 4125 R 4125
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 540
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I SGK +V IACG +SA +T G L T+G G
Sbjct: 541 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 580
Query: 318 YGQ 320
YG+
Sbjct: 581 YGR 583
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3035 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3093
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3094 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3138
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3139 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3192 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3250
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTDAG + +G
Sbjct: 3251 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDAGQVYAWGDND 3286
Query: 318 YGQR 321
+GQ+
Sbjct: 3287 HGQQ 3290
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4208 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4266
Query: 119 VTEAGEVYTWG 129
+E GEVYTWG
Sbjct: 4267 CSEDGEVYTWG 4277
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 104/274 (37%), Gaps = 49/274 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
GG A + GK+ G A + S G P P + +S VVK A G
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3056
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++T G+V++WG D G G F + + K + + A
Sbjct: 3057 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3106
Query: 173 GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
TSS E GD L P +V + G ++ +VA G R T
Sbjct: 3107 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3166
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L L+D G V+ WG G G+LG G + G + P + + +N G
Sbjct: 3167 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 3207
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
V +I CG + S +T +G + T+G G Y
Sbjct: 3208 ------VCQIECGAQFSLALTKSGVVWTWGKGDY 3235
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 573
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALT 674
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 735 GSNDQCQHFDTLRVTK-PEPSALPGLD 760
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGA 4104
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4105 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4148
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
VA +G TL L+D VW WG G G+LG G + G P
Sbjct: 4149 VDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4191
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4192 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4229
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4055 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHS 4106
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4107 ACVTAAGDLYTWG 4119
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3241 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT 3294
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 86/212 (40%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
++VK AA H +++ GEVY+WG G G G +P
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 536
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 594
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 595 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 652
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 653 EKLQDLDVVKVRCGSQFSVALTKDGQVYSWGK 684
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G K+ +A G H + S+ G+V+ WG EGQLG G+ + P L+ L+
Sbjct: 4251 GKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGT-TNAIQRPRLVAALQ 4302
>gi|442319627|ref|YP_007359648.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441487269|gb|AGC43964.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1096
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 97/236 (41%), Gaps = 39/236 (16%)
Query: 40 SPIPARLCGGDSWK----DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
+P+PAR+ W+ G G +LA G + +WG A+ GQ L G
Sbjct: 87 NPMPARV-----WRLFSITAIGAGELHSLALKSDGTVWSWG-ANTNGQ--LGDGTLISRS 138
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
P P+P +VV AAG++H + + G V+ WG +AG D T
Sbjct: 139 VPAPVPGLTNVVAIAAGFSHSMVLKADGTVWAWG-------------LNAAGQL-GDGTP 184
Query: 156 KQSALPTEQAPPSDKR--AGEEVVKRRKTSSAR------EESENPASGDEFFTLSPCLVT 207
+ P + + + A V T+ R +GD + +
Sbjct: 185 TRRLTPVQVLGLTGVKDIAAGNVHSLALTADGRLWTWGGNVDGQLGTGDLVGRSTAAAL- 243
Query: 208 LNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
PG+ + ++ GG H+LIL G VW WG GQLGLGS + PTP +P L
Sbjct: 244 --PGMTGVVALSGGGSHSLILKMDGSVWSWGKNDAGQLGLGSVVS-TPTPTQVPGL 296
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 79/210 (37%), Gaps = 11/210 (5%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +L G + +WG +D GQ L G TP P +P +V G H V
Sbjct: 254 GGGSHSLILKMDGSVWSWGK-NDAGQ--LGLGSVVSTPTPTQVPGLTEMVAVTGGGQHSV 310
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++ G V+ WG + G Q+ S + + L + + V
Sbjct: 311 ALRVDGTVWAWG-------SNARAQLGDGTQTQRLSPCQVTGLTQVKGVAAGGGLHSVAV 363
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
K A + GD + + T V+ V+AGG HTL L G WGWG
Sbjct: 364 KGNGEVWAWGSNSEGQVGDGTYLMKLVPTTARVLVERADVSAGGGHTLALKPDGTAWGWG 423
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
+ QLG G+ P P + L A+
Sbjct: 424 LNAQSQLGDGTTTAR-PLPVQVLNLTRVAA 452
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 59/139 (42%), Gaps = 23/139 (16%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM---VPTPHLIPCLEHAASGK 269
IT + AG H+L L G VW WG GQLG G+ I P P L + AA
Sbjct: 98 SITAIGAGELHSLALKSDGTVWSWGANTNGQLGDGTLISRSVPAPVPGLTNVVAIAAGFS 157
Query: 270 DRPLLVRQGSV-----NSSGKAGR---------------SYVKEIACGGRHSAVVTDAGA 309
+L G+V N++G+ G + VK+IA G HS +T G
Sbjct: 158 HSMVLKADGTVWAWGLNAAGQLGDGTPTRRLTPVQVLGLTGVKDIAAGNVHSLALTADGR 217
Query: 310 LLTFGWGLYGQRMAKCLAG 328
L T+G + GQ L G
Sbjct: 218 LWTWGGNVDGQLGTGDLVG 236
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 90/224 (40%), Gaps = 27/224 (12%)
Query: 36 SPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
S + +P P ++ G V GGG ++A G + WGS ++ L G +
Sbjct: 283 SVVSTPTPTQVPGLTEMVAVTGGGQ-HSVALRVDGTVWAWGS---NARAQLGDGTQTQRL 338
Query: 96 EPFPLPTEASVVK--AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
P + T + VK AA G H V+V GEV+ WG + G G D
Sbjct: 339 SPCQV-TGLTQVKGVAAGGGLHSVAVKGNGEVWAWG----------SNSEGQVG----DG 383
Query: 154 TGKQSALPT------EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVT 207
T +PT E+A S +K T+ + GD T P V
Sbjct: 384 TYLMKLVPTTARVLVERADVSAGGGHTLALKPDGTAWGWGLNAQSQLGDGTTTARPLPVQ 443
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
+ ++ V+AG H+L L + G VWGWG G +G G+ +
Sbjct: 444 VLNLTRVAAVSAGTYHSLALKEDGTVWGWGANYWGAIGDGTALN 487
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 94/240 (39%), Gaps = 23/240 (9%)
Query: 22 VYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
V WG + G + + + +P R+ G + G GF+LA G + WG
Sbjct: 869 VQAWGSNIQGQLGDGTTVSRVLPVRVQGLTGVAAIAAG-DGFSLALKHDGTVWAWG---- 923
Query: 81 EGQSYLTSGKHGETPEPFPLPTEA--SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
G + G + P+ T+A V AAG H +++ G ++ WG +
Sbjct: 924 -GNTLGQLGDNTTLRSLVPVRTQALTGVTAVAAGRNHSLALKGDGTLWAWG-------SN 975
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS-AREESENPASG-D 196
+ G +K + + ++L A + V K R + G
Sbjct: 976 TYGELGDGTQARKLAPVQVTSLTGVSALDAGDHHSLAVTSGGKVWGWGRNQFGQVGKGVK 1035
Query: 197 EFFTLSPCLVTLNPGV-KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVP 254
+ L P V PG+ VA GG H+L L VW WG+G GQLG G S +++ P
Sbjct: 1036 SNWQLLPAQV---PGLTSAVAVAGGGEHSLALLSDRSVWAWGHGDMGQLGTGMSNLRLSP 1092
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 89/239 (37%), Gaps = 28/239 (11%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPE-PFPLPTEASVVKAAAGWAHCVSVT 120
+LA S G + WG D L G T PF +P VV AAG H +++
Sbjct: 509 HSLALSVDGSVWAWG---DNSLGQLGDGTVTPTRNAPFRVPNLEGVVSLAAGGEHSLALK 565
Query: 121 EAGEVYTWGWRE-CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
G V+ WG ++ C V R +Q T+ R V++
Sbjct: 566 ADGTVWVWGRQDTCADPENVGRVL---------RVPEQVQGLTDAVAVRAGRCHSVVLRA 616
Query: 180 RKTSSAREESENPASGDEFFT--LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
T A + D FT ++P V GV + G TL L G W WG
Sbjct: 617 DGTLWAWGRNAEGQLADGTFTDRMTPARVDGLTGV--ISFSVGSEQTLALKADGTAWAWG 674
Query: 238 YGGEGQLGLG-----SRIKMVPTPHLIPCLE----HAASGKDRPLLVRQGSVNSSGKAG 287
+GQLG G +R VPT + + HA KD L GS N+ G+ G
Sbjct: 675 PNAQGQLGGGLSVPRTRPTQVPTLTDVRTVAMGAVHALVLKDDLTLWAWGS-NAEGQVG 732
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 68/170 (40%), Gaps = 23/170 (13%)
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
P + V AAG H +++T G ++TWG V G+ G ST
Sbjct: 190 PVQVLGLTGVKDIAAGNVHSLALTADGRLWTWG-------GNVDGQLGT-GDLVGRST-- 239
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS----GDEFFTLSPCLVTLNPGV 212
+ALP + G + + S +N A G T +P V PG+
Sbjct: 240 AAALPGMTGVVALSGGGSHSLILKMDGSVWSWGKNDAGQLGLGSVVSTPTPTQV---PGL 296
Query: 213 -KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
++ V GG+H++ L G VW WG QLG G++ T L PC
Sbjct: 297 TEMVAVTGGGQHSVALRVDGTVWAWGSNARAQLGDGTQ-----TQRLSPC 341
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G + L+P VT GV + + AG H+L ++ G+VWGWG GQ+G G +
Sbjct: 983 GTQARKLAPVQVTSLTGV--SALDAGDHHSLAVTSGGKVWGWGRNQFGQVGKGVKSNWQL 1040
Query: 255 TPHLIPCLEHAAS 267
P +P L A +
Sbjct: 1041 LPAQVPGLTSAVA 1053
>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
musculus]
Length = 4841
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3053 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3095
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3096 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3136
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4034 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4084
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 4085 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4127
Query: 319 GQ 320
G+
Sbjct: 4128 GR 4129
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 55/122 (45%), Gaps = 23/122 (18%)
Query: 201 LSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
L+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P +
Sbjct: 488 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPKV 546
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
I SGK +V IACG +SA +T G L T+G G Y
Sbjct: 547 ISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNY 586
Query: 319 GQ 320
G+
Sbjct: 587 GR 588
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3040 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3098
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3099 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3143
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3144 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3196
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3197 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3255
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD+G + +G
Sbjct: 3256 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDSGQVYAWGDND 3291
Query: 318 YGQR 321
+GQ+
Sbjct: 3292 HGQQ 3295
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 664 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 722
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 723 GSTHCLALTEDSEVHSWG 740
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4212 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4270
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4271 CTEDGEVYTWG 4281
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 108/280 (38%), Gaps = 61/280 (21%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG--ETPEPFPLPTEAS-----VVKA 109
GG A + GK+ + G A T+G+ G + P+P + + VVK
Sbjct: 3004 AGGSKSLFAVTVEGKVYSCGEA--------TNGRLGLGMSSGTVPIPRQITALSSYVVKK 3055
Query: 110 AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
A G H ++T G+V++WG D G G F + + K + +
Sbjct: 3056 VAVHSGGRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3105
Query: 167 PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
A TSS E GD L P +V + G ++ +VA G
Sbjct: 3106 RIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3165
Query: 221 GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
R TL L+D G V+ WG G G+LG G + G + P + +
Sbjct: 3166 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 3207
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+N G V +I CG + S +T +G + T+G G Y
Sbjct: 3208 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDY 3240
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 522 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 578
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 579 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 629
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 630 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 679
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 680 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 739
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 740 GSNDQCQHFDTLRVTK-PEPTALPGLD 765
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4049 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4108
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4109 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4152
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A +G TL L+D VW WG G G+LG G + G P
Sbjct: 4153 IDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4195
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4196 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4233
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4059 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4110
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4111 ACVTAAGDLYTWG 4123
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3246 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3299
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 86/212 (40%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
++VK AA H +++ GEVY+WG G G G +P
Sbjct: 500 NIVKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 541
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 542 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 599
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 600 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 657
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 658 EKLQDLDVIKVRCGSQFSIALTKDGQVYSWGK 689
>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4836
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3090
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3091 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4029 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4079
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 4080 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4122
Query: 319 GQ 320
G+
Sbjct: 4123 GR 4124
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 55/122 (45%), Gaps = 23/122 (18%)
Query: 201 LSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
L+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P +
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPKV 541
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
I SGK +V IACG +SA +T G L T+G G Y
Sbjct: 542 ISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNY 581
Query: 319 GQ 320
G+
Sbjct: 582 GR 583
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3035 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3093
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3094 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3138
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3139 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3192 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3250
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD+G + +G
Sbjct: 3251 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDSGQVYAWGDND 3286
Query: 318 YGQR 321
+GQ+
Sbjct: 3287 HGQQ 3290
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4207 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4266 CTEDGEVYTWG 4276
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 108/280 (38%), Gaps = 61/280 (21%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG--ETPEPFPLPTEAS-----VVKA 109
GG A + GK+ + G A T+G+ G + P+P + + VVK
Sbjct: 2999 AGGSKSLFAVTVEGKVYSCGEA--------TNGRLGLGMSSGTVPIPRQITALSSYVVKK 3050
Query: 110 AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
A G H ++T G+V++WG D G G F + + K + +
Sbjct: 3051 VAVHSGGRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3100
Query: 167 PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
A TSS E GD L P +V + G ++ +VA G
Sbjct: 3101 RIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3160
Query: 221 GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
R TL L+D G V+ WG G G+LG G + G + P + +
Sbjct: 3161 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 3202
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+N G V +I CG + S +T +G + T+G G Y
Sbjct: 3203 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDY 3235
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 573
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 674
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 735 GSNDQCQHFDTLRVTK-PEPTALPGLD 760
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4103
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4104 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4147
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A +G TL L+D VW WG G G+LG G + G P
Sbjct: 4148 IDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4190
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4191 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4228
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4054 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4105
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4106 ACVTAAGDLYTWG 4118
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3241 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3294
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 86/212 (40%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
++VK AA H +++ GEVY+WG G G G +P
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 536
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 594
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 595 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 652
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 653 EKLQDLDVIKVRCGSQFSIALTKDGQVYSWGK 684
>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
Length = 4836
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3090
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3091 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4029 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4079
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 4080 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4122
Query: 319 GQ 320
G+
Sbjct: 4123 GR 4124
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 55/122 (45%), Gaps = 23/122 (18%)
Query: 201 LSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
L+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P +
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPKV 541
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
I SGK +V IACG +SA +T G L T+G G Y
Sbjct: 542 ISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNY 581
Query: 319 GQ 320
G+
Sbjct: 582 GR 583
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3035 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3093
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3094 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3138
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3139 ----TQLKPKMVKVLLGHRVI---QVACGTRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3192 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3250
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD+G + +G
Sbjct: 3251 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDSGQVYAWGDND 3286
Query: 318 YGQR 321
+GQ+
Sbjct: 3287 HGQQ 3290
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4207 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4266 CTEDGEVYTWG 4276
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + L + +H P+ V+ AA
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQ-RLGLGTEEHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4103
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4104 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4147
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A +G TL L+D VW WG G G+LG G + G P
Sbjct: 4148 IDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGSKVP 4190
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4191 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4228
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 573
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 674
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 675 KDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 735 GSNDQCQHFDTLRVTK-PEPTALPGLD 760
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4054 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4105
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4106 ACVTAAGDLYTWG 4118
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3241 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3294
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 86/212 (40%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
++VK AA H +++ GEVY+WG G G G +P
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 536
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 594
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 595 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 652
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 653 EKLQDLDVIKVRCGSQFSIALTKDGQVYSWGK 684
>gi|8131932|gb|AAF73142.1|AF148799_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 416
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 27/113 (23%)
Query: 210 PGV--KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
PG+ K+ +VA GG HT++L++ V+ +G G GQLGLG+ + P I EH
Sbjct: 239 PGIPGKVVQVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAI---EHIKD 294
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
K + IACG H+A++TD G + TFG G +G+
Sbjct: 295 QK---------------------ISFIACGENHTALITDMGLMYTFGDGRHGK 326
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 57/138 (41%), Gaps = 29/138 (21%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL- 262
C+ L P K+ A G HTL+ ++ G+V+ G EGQLGLG + T HLI
Sbjct: 80 CVKALKPE-KVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGD-TEERSTFHLISFFT 137
Query: 263 ------EHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IAC 296
+ +A L G + NS G+ G V I+C
Sbjct: 138 SQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWISC 197
Query: 297 GGRHSAVVTDAGALLTFG 314
G HSA VT G L TFG
Sbjct: 198 GYYHSAFVTTEGQLYTFG 215
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 93/251 (37%), Gaps = 51/251 (20%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK----AAAGWAHCVSVT 120
A +E G+L WG + EGQ L E +P + +V K + G+ H VT
Sbjct: 154 ALTEDGELFMWGD-NSEGQIGL------ENVTNVCVPQQVTVGKPISWISCGYYHSAFVT 206
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA----GEEV 176
G++YT+G EC G G + + P P + G V
Sbjct: 207 TEGQLYTFGEPEC----------GKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGGHTV 256
Query: 177 VKRRK---TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
V K T + + F T P + KI+ +A G HT +++DMG +
Sbjct: 257 VLTEKAVYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLM 316
Query: 234 WGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
+ +G G G+LGLG T IP L R V+
Sbjct: 317 YTFGDGRHGKLGLGLENS---TNQFIPTL--------------------CSNFLRFIVQL 353
Query: 294 IACGGRHSAVV 304
++CGG H+ V
Sbjct: 354 VSCGGCHTLVF 364
>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
Length = 5093
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3308 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3350
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3351 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3391
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4286 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4336
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 4337 PC--------DRPRVI---------ESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRY 4379
Query: 319 GQ 320
G+
Sbjct: 4380 GR 4381
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 742 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 800
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I SGK +V IACG +SA +T G L T+G G
Sbjct: 801 VISTF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 840
Query: 318 YGQ 320
YG+
Sbjct: 841 YGR 843
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3295 PIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3353
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3354 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3398
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3399 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3451
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3452 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3510
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD+G + +G
Sbjct: 3511 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDSGQVYAWGDND 3546
Query: 318 YGQR 321
+GQ+
Sbjct: 3547 HGQQ 3550
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 919 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 977
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 978 GSTHCLALTEDSEVHSWG 995
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4464 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4522
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4523 CTEDGEVYTWG 4533
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 777 VYSWGCGDGGRLGHGDTVPLEEP---KVISTFSGKQAGKHVVHIACGSTYSAAITAEGEL 833
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 834 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 884
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 885 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 934
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 935 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 994
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 995 GSNDQCQHFDTLRVTK-PEPTALPGLD 1020
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 41/108 (37%), Gaps = 25/108 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3501 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT-----T 3555
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
T + P L H G+ + +ACG HS
Sbjct: 3556 TVNRKPTLVHGLEGQK--------------------ITRVACGSSHSV 3583
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4301 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVADVAAGGA 4360
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4361 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4404
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A +G TL L+D VW WG G G+LG G + G P
Sbjct: 4405 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4447
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4448 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4485
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 87/212 (41%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
++VK AA H +++ GEVY+WG C G G G +P
Sbjct: 755 NIVKIAAHSDGHHYLALAATGEVYSWG---C----------GDGGRL-----GHGDTVPL 796
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 797 EEPKVISTFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 854
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 855 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 912
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 913 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 944
Score = 37.7 bits (86), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 38/84 (45%), Gaps = 15/84 (17%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----S 105
K G LA S G++ +WG A+D GK G +P P E+
Sbjct: 4300 KVAVNSGGKHCLALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIE 4351
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
V AAG AH VT AG++YTWG
Sbjct: 4352 VADVAAGGAHSACVTAAGDLYTWG 4375
>gi|327289459|ref|XP_003229442.1| PREDICTED: regulator of chromosome condensation-like [Anolis
carolinensis]
Length = 420
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 111/296 (37%), Gaps = 67/296 (22%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQS 84
G P K P L +P ++ ++ GG + +E+GK+ T+G +DEG
Sbjct: 43 LGLGPNVMARKRPALVQLPEKIIQAEA------GGV-HTVCLTETGKIYTFG-CNDEGAL 94
Query: 85 YLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
+ + G P + + VV+ +AG +H ++TE G V+ WG
Sbjct: 95 GRDTSEEGSESTPGLVDLKEKVVQVSAGDSHTAALTEDGRVFIWG--------------- 139
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPC 204
+F +D G L AP + GEE V SP
Sbjct: 140 ---AF-RDENGVIGLL----AP----QKGEENVG-----------------------SPL 164
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
V L V + K+A+G H ++S G ++ G G GQLG VP
Sbjct: 165 PVELQLDVPVVKIASGSHHLALVSMAGNLYTCGCGDNGQLG------RVPQVFTARGGRR 218
Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P + SV G + ++++ CG + +T G ++ FG Y Q
Sbjct: 219 GLKLLLLPQTI---SVKQRGCKTKGRIRDVFCGSYSTLAITQEGHVIGFGLSNYYQ 271
>gi|389742932|gb|EIM84118.1| RCC1/BLIP-II [Stereum hirsutum FP-91666 SS1]
Length = 471
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 81/210 (38%), Gaps = 54/210 (25%)
Query: 62 FALATSESGKLITWGSAD-DEGQSYLTSGKHG-ETPEPFPLPTEA-----SVVKAAAGWA 114
ALA G+L WG +EG T+G G ++ P+P PT A + A G
Sbjct: 131 LALALDAEGQLRQWGMFKMNEG----TTGFDGIKSSAPYPTPTPAFPKKTEISNVACGSN 186
Query: 115 HCVSVTEAGEVYTWGW------------------RECVPSAKVTRDFGSAG-----SFQK 151
H +++T +G VYTWG R VP A R+ + G SF
Sbjct: 187 HVLALTTSGHVYTWGSNREFQLGRKVLSRNRKVDRAYVPEALHLRNIVAVGASSCTSFAV 246
Query: 152 DSTGKQ---SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTL 208
D G A Q SD+R GEE V T SE
Sbjct: 247 DHQGVVFAWGANNLRQTGISDQRGGEESVISTPTIVDALASER----------------- 289
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
+ G K+ ++ G HTL L D GQVWG G
Sbjct: 290 HGGSKVIQIEGGSDHTLFLFDNGQVWGCGL 319
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
T P L+P VKITK+A+ GR L + G ++ WG G QLGLG
Sbjct: 379 LTFPPVSDELHP-VKITKIASSGRCNLAVDVHGHLYAWGEGNSCQLGLGD 427
>gi|363737854|ref|XP_001233548.2| PREDICTED: uncharacterized protein LOC770213 [Gallus gallus]
Length = 187
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 14/117 (11%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
+ VAAGG H+ +SD G ++ WG+ GQLGL SR E +G + PL
Sbjct: 1 MRAVAAGGWHSACVSDGGDLYVWGWNESGQLGLPSRAVAEEQAED----EDMGAGPEDPL 56
Query: 274 LVRQ--GSVNSSGKAGRSY--------VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
L + G+ S +A + V ++CG RH+A +T G L T+GWG YGQ
Sbjct: 57 LPGEPPGAAFISIQAFPALLDLPLEPAVAAVSCGSRHTAALTRGGELYTWGWGKYGQ 113
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 57/141 (40%), Gaps = 26/141 (18%)
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AA GW H V++ G++Y WGW E +R A+ EQA
Sbjct: 5 AAGGW-HSACVSDGGDLYVWGWNESGQLGLPSR-----------------AVAEEQAEDE 46
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
D AG E E P + P L+ L + V+ G RHT L+
Sbjct: 47 DMGAGPE--------DPLLPGEPPGAAFISIQAFPALLDLPLEPAVAAVSCGSRHTAALT 98
Query: 229 DMGQVWGWGYGGEGQLGLGSR 249
G+++ WG+G GQLG G R
Sbjct: 99 RGGELYTWGWGKYGQLGHGDR 119
>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Cricetulus griseus]
Length = 4836
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 3090
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 3091 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4029 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4079
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 4080 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 4122
Query: 319 GQ 320
G+
Sbjct: 4123 GR 4124
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 55/122 (45%), Gaps = 23/122 (18%)
Query: 201 LSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
L+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P +
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPKV 541
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
I SGK +V IACG +SA +T G L T+G G Y
Sbjct: 542 ISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNY 581
Query: 319 GQ 320
G+
Sbjct: 582 GR 583
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3035 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3093
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3094 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3138
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3139 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3192 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3250
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD+G + +G
Sbjct: 3251 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDSGQVYAWGDND 3286
Query: 318 YGQR 321
+GQ+
Sbjct: 3287 HGQQ 3290
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4207 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4266 CTEDGEVYTWG 4276
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 108/280 (38%), Gaps = 61/280 (21%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG--ETPEPFPLPTEAS-----VVKA 109
GG A + GK+ + G A T+G+ G + P+P + + VVK
Sbjct: 2999 AGGSKSLFAVTVEGKVYSCGEA--------TNGRLGLGMSSGTVPIPRQITALSSYVVKK 3050
Query: 110 AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
A G H ++T G+V++WG D G G F + + K + +
Sbjct: 3051 VAVHSGGRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3100
Query: 167 PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
A TSS E GD L P +V + G ++ +VA G
Sbjct: 3101 RIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3160
Query: 221 GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
R TL L+D G V+ WG G G+LG G + G + P + +
Sbjct: 3161 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 3202
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+N G V +I CG + S +T +G + T+G G Y
Sbjct: 3203 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDY 3235
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 573
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 674
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 735 GSNDQCQHFDTLRVTK-PEPTALPGLD 760
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4103
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4104 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4147
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A +G TL L+D VW WG G G+LG G + G P
Sbjct: 4148 IDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 4190
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 4191 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 4228
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4054 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4105
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4106 ACVTAAGDLYTWG 4118
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3241 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3294
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 86/212 (40%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
++VK AA H +++ GEVY+WG G G G +P
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 536
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 594
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 595 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 652
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 653 EKLQDLDVIKVRCGSQFSIALTKDGQVYSWGK 684
>gi|392595634|gb|EIW84957.1| RCC1 BLIP-II [Coniophora puteana RWD-64-598 SS2]
Length = 582
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 95/224 (42%), Gaps = 37/224 (16%)
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD------ 152
PL V +AG H +++T +G +++ S K G G + D
Sbjct: 231 PLSWGEKFVSISAGQDHVLALTSSGRTFSYA------STKKANSHGQLGYRKFDLPASVT 284
Query: 153 STGKQSALPTEQAP--PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNP 210
T + +P E P D + R SS+ + E A D S L +
Sbjct: 285 QTKSTTRIPVELLPKLAKDPYSRASPFIRELASSSADPLE--AIDDRHIRFSDTLFEIQS 342
Query: 211 --GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM----VPTPHLI----- 259
G+K+++VAAG R + +L+D G+ G+G GQ+GLGS + + VPT ++
Sbjct: 343 LQGIKVSQVAAGSRSSFVLTDSGRALGFGANEYGQMGLGSNVTLDSIAVPTEIVLSRNVP 402
Query: 260 -----PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
CLE AA G + V + + S+GK +V + CG
Sbjct: 403 PSTSTKCLEIAAGG-NLTCFVAERTGLSTGK----FVDVLVCGN 441
>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
Length = 1187
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 60/121 (49%), Gaps = 27/121 (22%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
SP L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 377 SPTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNR---------- 426
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
+ DRP ++ + GK V +IA GG HSA +T G L T+G G YG
Sbjct: 427 -------NSCDRPRVIE----SLRGKE----VVDIAAGGAHSACITSTGELFTWGKGRYG 471
Query: 320 Q 320
+
Sbjct: 472 R 472
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P +V+ A G HCV+
Sbjct: 555 GSQFSVALTKSGCVYTWGKGDYHRLGH-GSDDHVRRPRKVAALQGKNVISIATGSLHCVA 613
Query: 119 VTEAGEVYTWG 129
T+ GEV+TWG
Sbjct: 614 CTDQGEVFTWG 624
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 76/212 (35%), Gaps = 66/212 (31%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G P EA VVK
Sbjct: 500 CGSGDAQTLCITDDDSVWSWGDGD-----YGKLGRGGSDGCKIPQKVEALIGQGVVKVEC 554
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G V++T++G VYTWG G + + G
Sbjct: 555 GSQFSVALTKSGCVYTWG----------------KGDYHRLGHG---------------- 582
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ + V + RK ++ + G + +A G H + +D G
Sbjct: 583 SDDHVRRPRKVAALQ------------------------GKNVISIATGSLHCVACTDQG 618
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
+V+ WG EGQLG GS +P P L+ L+
Sbjct: 619 EVFTWGDNDEGQLGDGS-TSAIPRPRLVAALQ 649
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTE 121
LA S G++ +WG A+D L G P + + VV AAG AH +T
Sbjct: 402 LALSSEGEVFSWGEAED---GKLGHGNRNSCDRPRVIESLRGKEVVDIAAGGAHSACITS 458
Query: 122 AGEVYTWG 129
GE++TWG
Sbjct: 459 TGELFTWG 466
>gi|428173156|gb|EKX42060.1| hypothetical protein GUITHDRAFT_95823 [Guillardia theta CCMP2712]
Length = 546
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 111/260 (42%), Gaps = 39/260 (15%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA-AAGWAHCV 117
G G A +++G + TWG GQ L G + P P+P VK+ +AG+ H V
Sbjct: 281 GAGHCAAVTDTGLVYTWGQGR-YGQ--LGHGDDVDKIIPQPVPRIKGEVKSVSAGFYHTV 337
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA-------PPSDK 170
+VT G ++TWG G G + Q +PT A P +
Sbjct: 338 AVTHHGALFTWGD-------------GKEGKLGHNDNA-QRLIPTLVAAFIEWGMPVAAA 383
Query: 171 RAG---EEVVKRRKT--SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
+AG V+ RR S +S G++ SP ++ + +AAG H++
Sbjct: 384 QAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSV 443
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH-------AASGKDRPLLVR-Q 277
L+D GQ++ WG G G+LG GS V P + + H A+G+ + R +
Sbjct: 444 ALTDQGQIYTWGCGKLGRLGHGSDSDEV-LPRKLALISHDTIKAIAVAAGEAHTCIFRSE 502
Query: 278 GSVNSSGKAGRSYVKEIACG 297
GS+ + G+ + E +C
Sbjct: 503 GSLITLGRVSHGRMAEGSCA 522
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 108/300 (36%), Gaps = 76/300 (25%)
Query: 39 LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
++ IP L S + + GG T E+GK + + S+ + KH T
Sbjct: 220 ITLIPHHLTITKSCQVLVGG------LTLEAGKTVL------QSASFNSIKKHRVTRAGL 267
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW----------------RECVPSAKVTRD 142
L + G HC +VT+ G VYTWG + VP K
Sbjct: 268 SLLRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIKGEVK 327
Query: 143 FGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS 202
SAG + + AL T K + +R L
Sbjct: 328 SVSAGFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQR---------------------LI 366
Query: 203 PCLVT--LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
P LV + G+ + AGG HTL+L+ GQV+ +G G G+LG G+ +P +
Sbjct: 367 PTLVAAFIEWGMPVAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQW-SPTFLS 425
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
LE +R + IA G HS +TD G + T+G G G+
Sbjct: 426 ALE-----SERCV-------------------SIAAGFAHSVALTDQGQIYTWGCGKLGR 461
>gi|312792299|ref|YP_004025222.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179439|gb|ADQ39609.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 754
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 132/326 (40%), Gaps = 54/326 (16%)
Query: 18 KETVVYMWGYLPGTSPEK---SPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
K+ V+MW Y + + SP+P ++ G KDV G +LA + G +
Sbjct: 212 KDGTVWMWEYKYNYYEQLRRGADEYSPVPVQVEG---LKDVVAIAAGRYHSLALKKDGTV 268
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
WG+ + GQ L +GK ++ +P + VV AAG H +++ + G ++ WG
Sbjct: 269 WAWGN-NYYGQ--LGNGKSEDSYDPVQVKNLKDVVAIAAGENHSLALKKDGTIWAWG--- 322
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG----EEVVKRRKTSSAREE 188
++G G +S ++ +P + D A E + +K +
Sbjct: 323 -------DNEWGQLG----NSISEKLCVPVQFKSLKDVVAIAAGCEHSLALKKDGTVWSW 371
Query: 189 SENP----ASGDEFFTLSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
N +G+ + P V G+K + +A G H+L L G VW WG GQ
Sbjct: 372 GNNYYGQLGNGNSIDSYVPVQVR---GLKDVVAIATGNAHSLALKKDGTVWAWGNNEFGQ 428
Query: 244 LGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVRQ-GSV------------NSSGKAG 287
LG G+ K P + L+ A+G D L ++ G+V N SG G
Sbjct: 429 LGNGTN-KSSFVPVQVKGLKDVVAIAAGSDHSLAFKKDGTVWAWGNNEFGQLGNGSGGYG 487
Query: 288 RSYVKEIACGGRHSAVVTDAGALLTF 313
+ Y + G V AG++ +
Sbjct: 488 QYYAVPVQVKGLKDVVAVAAGSVHSL 513
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 134/351 (38%), Gaps = 65/351 (18%)
Query: 10 ENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLC---GGDSWKDVCG--GGCGFAL 64
EN + K+ ++ WG E + + I +LC S KDV GC +L
Sbjct: 306 ENHSLALKKDGTIWAWG-----DNEWGQLGNSISEKLCVPVQFKSLKDVVAIAAGCEHSL 360
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A + G + +WG+ + GQ L +G ++ P + VV A G AH +++ + G
Sbjct: 361 ALKKDGTVWSWGN-NYYGQ--LGNGNSIDSYVPVQVRGLKDVVAIATGNAHSLALKKDGT 417
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK---RAGEE---VVK 178
V+ WG +FG G + T K S +P + D AG + K
Sbjct: 418 VWAWG----------NNEFGQLG----NGTNKSSFVPVQVKGLKDVVAIAAGSDHSLAFK 463
Query: 179 RRKTSSAREESE-----NPASGDEFFTLSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQ 232
+ T A +E N + G + P V G+K + VAAG H+L L G
Sbjct: 464 KDGTVWAWGNNEFGQLGNGSGGYGQYYAVPVQV---KGLKDVVAVAAGSVHSLALKKDGT 520
Query: 233 VWGWGYGGEGQLGLGSRIKMVP--TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA---- 286
+W WG G LG VP L + AA +L + G+V + G+
Sbjct: 521 IWAWGSNYHGLLGNDIERSFVPVQVKGLKDVVAIAAGSNHSLVLKKDGTVWAWGEVWFDL 580
Query: 287 -----------------GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G V IA G HS + G + +G +GQ
Sbjct: 581 LNENSRLVYSSVPVQIKGLKDVVAIAAGEHHSLGLKKDGTVWAWGDNFFGQ 631
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 110/309 (35%), Gaps = 42/309 (13%)
Query: 40 SPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
S IP ++ G KDV G +L + G + WGS D +G++ + P
Sbjct: 84 SIIPVKVKG---LKDVVAIAAGRYHSLTLKKDGTVWAWGSNKDGQLGNRDAGEY--SIVP 138
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK-VTRDFGSAGSFQ--KDST 154
+ VV AAG + + + + G V+ WG E + +DF + KD
Sbjct: 139 VQVKGLKDVVAIAAGDGYSLGLKKDGTVWCWGLNESIQVIDGSNKDFSVPFQIKGLKDVV 198
Query: 155 GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
+ A D K R DE+ SP V + +
Sbjct: 199 AIAAGKDYSLALKKDGTVWMWEYKYNYYEQLRR------GADEY---SPVPVQVEGLKDV 249
Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG---SRIKMVPTPHLIPCLEHAASGKDR 271
+AAG H+L L G VW WG GQLG G V +L + AA
Sbjct: 250 VAIAAGRYHSLALKKDGTVWAWGNNYYGQLGNGKSEDSYDPVQVKNLKDVVAIAAGENHS 309
Query: 272 PLLVRQGSV-----NSSGKAGRSY---------------VKEIACGGRHSAVVTDAGALL 311
L + G++ N G+ G S V IA G HS + G +
Sbjct: 310 LALKKDGTIWAWGDNEWGQLGNSISEKLCVPVQFKSLKDVVAIAAGCEHSLALKKDGTVW 369
Query: 312 TFGWGLYGQ 320
++G YGQ
Sbjct: 370 SWGNNYYGQ 378
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 100/252 (39%), Gaps = 51/252 (20%)
Query: 18 KETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCG--GGCGFALATSESGK 71
K+ ++ WG L G E+S + P ++ G KDV G +L + G
Sbjct: 517 KDGTIWAWGSNYHGLLGNDIERSFV----PVQVKG---LKDVVAIAAGSNHSLVLKKDGT 569
Query: 72 LITWGSA----DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYT 127
+ WG +E + S P + VV AAG H + + + G V+
Sbjct: 570 VWAWGEVWFDLLNENSRLVYS------SVPVQIKGLKDVVAIAAGEHHSLGLKKDGTVWA 623
Query: 128 WGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA---GE---EVVKRRK 181
WG FG G+ ++ K S +P + D A GE +K+
Sbjct: 624 WG----------DNFFGQLGNSPRE---KYSLVPVQVKGLKDILAIATGEWHSLAIKKDG 670
Query: 182 TSSAREESE-----NPASGDEFFTLSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWG 235
T A E+ N SG + ++ P V G+K + ++AG H+L L G VWG
Sbjct: 671 TVWAWGENSTGQLGNETSGKDKYSYVPVQV---KGIKDVLAISAGSYHSLALKKDGTVWG 727
Query: 236 WGYGGEGQLGLG 247
WG GQLG G
Sbjct: 728 WGANARGQLGNG 739
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 135/340 (39%), Gaps = 65/340 (19%)
Query: 18 KETVVYMWGYLP----GTSPEKSPILSPIPARLCGGDSWKDVCG--GGCGFALATSESGK 71
K+ V+ WG G KS S +P ++ G KDV G +LA + G
Sbjct: 414 KDGTVWAWGNNEFGQLGNGTNKS---SFVPVQVKG---LKDVVAIAAGSDHSLAFKKDGT 467
Query: 72 LITWGSADDEGQSYLTSGKHGET-PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ WG+ ++ GQ SG +G+ P + VV AAG H +++ + G ++ WG
Sbjct: 468 VWAWGN-NEFGQLGNGSGGYGQYYAVPVQVKGLKDVVAVAAGSVHSLALKKDGTIWAWG- 525
Query: 131 RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA------GEEVVKRRKTSS 184
+ G G+ ++S +P + D A V+K+ T
Sbjct: 526 ---------SNYHGLLGN-----DIERSFVPVQVKGLKDVVAIAAGSNHSLVLKKDGTVW 571
Query: 185 AREES-ENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
A E + + + S V + + +AAG H+L L G VW WG GQ
Sbjct: 572 AWGEVWFDLLNENSRLVYSSVPVQIKGLKDVVAIAAGEHHSLGLKKDGTVWAWGDNFFGQ 631
Query: 244 LGLGSRIKMVPTPHLIPCLEH---AASGKDRPLLVRQ-GSV-----NSSGKAGR------ 288
LG R K P + L+ A+G+ L +++ G+V NS+G+ G
Sbjct: 632 LGNSPREKYSLVPVQVKGLKDILAIATGEWHSLAIKKDGTVWAWGENSTGQLGNETSGKD 691
Query: 289 --SY----------VKEIACGGRHSAVVTDAGALLTFGWG 316
SY V I+ G HS + G + +GWG
Sbjct: 692 KYSYVPVQVKGIKDVLAISAGSYHSLALKKDGTV--WGWG 729
>gi|61563742|ref|NP_060382.3| probable E3 ubiquitin-protein ligase HERC6 isoform 1 [Homo sapiens]
gi|74750679|sp|Q8IVU3.2|HERC6_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC6; AltName:
Full=HECT domain and RCC1-like domain-containing protein
6
gi|48686728|gb|AAQ14893.1|AF336798_1 HERC6 [Homo sapiens]
gi|66840150|gb|AAH42047.2| Hect domain and RLD 6 [Homo sapiens]
gi|194381386|dbj|BAG58647.1| unnamed protein product [Homo sapiens]
Length = 1022
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 61/149 (40%), Gaps = 36/149 (24%)
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE- 263
++TLN +KI +V+ G H+L LS QV+ WG GQLGLG +P + LE
Sbjct: 122 IMTLN-DIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEG 180
Query: 264 --------------------------------HAASGKDRPLLVRQGSVNSSGKAGRSYV 291
A SG++ P V+ S G V
Sbjct: 181 IPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVP--VQSNKPLSVGALKNLGV 238
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
I+CG H+AV+T G + TFG GQ
Sbjct: 239 VYISCGDAHTAVLTQDGKVFTFGDNRSGQ 267
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 56/129 (43%), Gaps = 31/129 (24%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR 271
V+ G H+L + G+V+ WG G EGQLG+G ++ TP I L + G
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYH 139
Query: 272 PLLVRQGSV------NSSGKAG--------------RSY----VKEIACGGRHSAVVTDA 307
L + + S NS G+ G RS + ++A GG HS ++
Sbjct: 140 SLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLC 199
Query: 308 GALLTFGWG 316
G +FGWG
Sbjct: 200 GT--SFGWG 206
>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
Length = 423
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 93/224 (41%), Gaps = 29/224 (12%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
+V + G H +++T +G VY+WGW D S QK + +Q L +
Sbjct: 55 IVAVSCGSRHTMALTASGAVYSWGWGSMGQLGH--GDLKSINVPQKIAFFEQEGLKVDYV 112
Query: 166 PPSDKRAGEEVVKRRKTSSAREES---------ENPASGDEFFTLSPCLVTLNPGVKITK 216
S V T E+ E A+ + F P L + + K
Sbjct: 113 --SCGGCHSAAVTNDGTLYMWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVAD-ESVVK 169
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
V+ GG HT L+++G+V+ WG G GQLG+GS L ++ G RP LV
Sbjct: 170 VSCGGTHTAALTNLGRVYVWGRGDSGQLGIGS-------AWLKDTDDNGLLGVSRPHLVE 222
Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G G V ++ACG HSA VT+ G + +G YG
Sbjct: 223 -------GFNGEKVV-QVACGAFHSAAVTEQGHVYIWGKEDYGM 258
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 105/270 (38%), Gaps = 53/270 (19%)
Query: 58 GGCGFALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFPL---PTEASVVKAAAG 112
GGC A T++ G L WG G H P PL + SVVK + G
Sbjct: 115 GGCHSAAVTND-GTLYMWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCG 173
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++T G VY WG + + G ++ KD T L + +
Sbjct: 174 GTHTAALTNLGRVYVWGRGD-------SGQLGIGSAWLKD-TDDNGLLGVSRPHLVEGFN 225
Query: 173 GEEVVK----RRKTSSAREESENPASGDEFFTL----------SPCLVTLNPGVKITKVA 218
GE+VV+ +++ E+ G E + + +P V + +V+
Sbjct: 226 GEKVVQVACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDIPALRVS 285
Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
GG HT++++ G + +G G G+LGLG K PHL+ L+
Sbjct: 286 CGGWHTMVVAKSGDCYAFGRGEYGRLGLGD-TKSRTRPHLVKALK--------------- 329
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAG 308
G++ + + ACGG H+ VT G
Sbjct: 330 --------GQTVI-QAACGGSHTLFVTSDG 350
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 49/110 (44%), Gaps = 23/110 (20%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G +I V+ G RHT+ L+ G V+ WG+G GQLG G +K + P I E D
Sbjct: 52 GEEIVAVSCGSRHTMALTASGAVYSWGWGSMGQLGHGD-LKSINVPQKIAFFEQEGLKVD 110
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
++CGG HSA VT+ G L +G +GQ
Sbjct: 111 Y----------------------VSCGGCHSAAVTNDGTLYMWGETHWGQ 138
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 25/118 (21%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P LV G K+ +VA G H+ +++ G V+ WG G LG+G TP +
Sbjct: 218 PHLVEGFNGEKVVQVACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQTSDQ-QTPKRVEFF 276
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ D P L ++CGG H+ VV +G FG G YG+
Sbjct: 277 D------DIPAL------------------RVSCGGWHTMVVAKSGDCYAFGRGEYGR 310
>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
Length = 3151
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 1352 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 1394
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 1395 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 1435
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG GSR
Sbjct: 2335 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSR---------S 2385
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 2386 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 2428
Query: 319 GQ 320
G+
Sbjct: 2429 GR 2430
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
P+P ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 1339 PLPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 1397
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 1398 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDTT--- 1442
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G VV+ + +++ A DE S
Sbjct: 1443 ----TQLKPKMVKVLLGHRVVQ---VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 1495
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 1496 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 1554
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD+G + +G
Sbjct: 1555 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDSGQVYAWGDND 1590
Query: 318 YGQR 321
+GQ+
Sbjct: 1591 HGQQ 1594
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A +++G + TWG D + S H P + A G HCV
Sbjct: 2513 GSQFSVALTKAGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKAIAIATGSLHCVC 2571
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 2572 CTEDGEVYTWG 2582
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 121/321 (37%), Gaps = 62/321 (19%)
Query: 16 ECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
+CK + + G + + + I P + + V GG T E GK+
Sbjct: 1263 DCKIHGLILLGRIRAEEEDLAAIKVPSFSETLSALNVVQVAGGSKSLFAVTVE-GKVYAC 1321
Query: 76 GSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKAAA---GWAHCVSVTEAGEV 125
G A T+G+ G + PLP + + VVK A G H ++T G+V
Sbjct: 1322 GEA--------TNGRLGLGLSSGTVPLPRQVTALSSYVVKKVAVHSGGRHATALTVDGKV 1373
Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA 185
++WG D G G F + + K + + A TSS
Sbjct: 1374 FSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSG 1423
Query: 186 RE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWG 237
E GD L P +V + G ++ +VA G R TL L+D G V+ WG
Sbjct: 1424 ELYTWGLGEYGRLGHGDTTTQLKPKMVKVLLGHRVVQVACGSRDAQTLALTDEGLVFSWG 1483
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
G G+LG G + G + P + + +N G V +I CG
Sbjct: 1484 DGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG------VCQIECG 1518
Query: 298 GRHSAVVTDAGALLTFGWGLY 318
+ S +T +G + T+G G Y
Sbjct: 1519 AQFSLALTKSGVVWTWGKGDY 1539
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 2360 LALSSEGEVYSWGEAED--------GKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHS 2411
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 2412 ACVTAAGDLYTWG 2424
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 1545 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 1598
>gi|260795414|ref|XP_002592700.1| hypothetical protein BRAFLDRAFT_118398 [Branchiostoma floridae]
gi|229277923|gb|EEN48711.1| hypothetical protein BRAFLDRAFT_118398 [Branchiostoma floridae]
Length = 392
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 18/216 (8%)
Query: 57 GGGCGFALATSESGKLITWGS-ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
G G +A + G++ WG+ D+ GQ LTS + P P +P A V+K ++G +H
Sbjct: 143 GAGDSHTIALTTDGRVWCWGTFRDNNGQFGLTSDGKVQ-PRPVEIPLPARVLKISSGVSH 201
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP----PSDKR 171
+TE G++YT+G E ++ F G + S AL + S +
Sbjct: 202 VACLTEDGDLYTFGCGEQGQLGRIAECFTVRGGRKGLSLLVDPALVRMKGKRGSGKSHMK 261
Query: 172 AGEEVVKRRKTSSAREESENPASG--DEFFTLS---------PCLVTLNPGVKITKVAAG 220
+ T + ++ E+ + + ++ + P V G + T++ AG
Sbjct: 262 FADVFCGSHNTFAISDDQEDVYAFGLNNYYQMGLEGDTARYVPEHVESLSGKRWTQIEAG 321
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPT 255
HT+ LS+ G+ + WG G QLGL + VPT
Sbjct: 322 QHHTVALSEDGEAYSWGMGTNLQLGLSDDDDVWVPT 357
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 89/253 (35%), Gaps = 86/253 (33%)
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
E +P + + V+ AG H V++T GEV++WG C + RD
Sbjct: 74 ERKKPGLVAIQDKVIDVCAGGMHTVALTVKGEVWSWG---CNDEGALGRD---------- 120
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
S + TE P + G
Sbjct: 121 ----TSEIGTETVPGK---------------------------------------VELGA 137
Query: 213 KITKVAAGGRHTLILSDMGQVWGWG--YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
KI ++ AG HT+ L+ G+VW WG GQ GL S K+ P P IP
Sbjct: 138 KIAQLGAGDSHTIALTTDGRVWCWGTFRDNNGQFGLTSDGKVQPRPVEIPL--------- 188
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ--RMAKCLAG 328
+ V +I+ G H A +T+ G L TFG G GQ R+A+C
Sbjct: 189 -----------------PARVLKISSGVSHVACLTEDGDLYTFGCGEQGQLGRIAECFTV 231
Query: 329 DGINMGSWVWVTP 341
G G + V P
Sbjct: 232 RGGRKGLSLLVDP 244
>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Gorilla gorilla gorilla]
Length = 4586
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 2799 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 2841
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 2842 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 2882
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 3779 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 3829
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 3830 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 3872
Query: 319 GQ 320
G+
Sbjct: 3873 GR 3874
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 2786 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 2844
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 2845 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 2889
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 2890 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2942
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 2943 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3001
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD+G + +G
Sbjct: 3002 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDSGQVYAWGDND 3037
Query: 318 YGQR 321
+GQ+
Sbjct: 3038 HGQQ 3041
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 54/123 (43%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL P LV + K+AA G H L L+ G+V+ WG G +LG G + + P
Sbjct: 458 TLVPQLVQGLASRNVVKIAAHSDGHHYLALAATGEVYSWGCGDGRRLGHGDTVPL-EEPK 516
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I SGK +V IACG +SA +T G L T+G G
Sbjct: 517 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 556
Query: 318 YGQ 320
YG+
Sbjct: 557 YGR 559
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 635 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 693
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 694 GSTHCLALTEDSEVHSWG 711
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 3957 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4015
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4016 CTEDGEVYTWG 4026
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 104/274 (37%), Gaps = 49/274 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
GG A + GK+ G A + S G P P + +S VVK A G
Sbjct: 2750 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 2807
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++T G+V++WG D G G F + + K + + A
Sbjct: 2808 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 2857
Query: 173 GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
TSS E GD L P +V + G ++ +VA G R T
Sbjct: 2858 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 2917
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L L+D G V+ WG G G+LG G + G + P + + +N G
Sbjct: 2918 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 2958
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
V +I CG + S +T +G + T+G G Y
Sbjct: 2959 ------VCQIECGAQFSLALTKSGVVWTWGKGDY 2986
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 493 VYSWGCGDGRRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 549
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 550 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 600
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 601 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 650
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 651 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 710
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 711 GSNDQCQHFDTLRVTK-PEPAALPGLD 736
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 3794 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 3853
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 3854 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 3897
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A +G TL L+D VW WG G G+LG G + G P
Sbjct: 3898 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 3940
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 3941 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 3978
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 3804 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 3855
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 3856 ACVTAAGDLYTWG 3868
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 85/208 (40%), Gaps = 45/208 (21%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
+VVK AA H +++ GEVY+WG + R G + + SA
Sbjct: 471 NVVKIAAHSDGHHYLALAATGEVYSWGCGD-------GRRLGHGDTVPLEEPKVISAF-- 521
Query: 163 EQAPPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTLSPCL 205
S K+AG+ VV T SA +E + +S DE P L
Sbjct: 522 -----SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI---PML 573
Query: 206 VTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
V G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI L+
Sbjct: 574 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIEKLQ 632
Query: 264 HAASGKDR------PLLVRQGSVNSSGK 285
K R L + G V S GK
Sbjct: 633 DLDVVKVRCGSQFSIALTKDGQVYSWGK 660
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 2992 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 3045
>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
Length = 2427
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 640 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 682
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 683 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 723
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 1620 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 1670
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 1671 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 1713
Query: 319 GQ 320
G+
Sbjct: 1714 GR 1715
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 627 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 685
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 686 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 730
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 731 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 783
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 784 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 842
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD+G + +G
Sbjct: 843 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDSGQVYAWGDND 878
Query: 318 YGQR 321
+GQ+
Sbjct: 879 HGQQ 882
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 1798 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 1856
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 1857 CTEDGEVYTWG 1867
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 104/274 (37%), Gaps = 49/274 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
GG A + GK+ G A + S G P P + +S VVK A G
Sbjct: 591 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 648
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++T G+V++WG D G G F + + K + + A
Sbjct: 649 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 698
Query: 173 GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
TSS E GD L P +V + G ++ +VA G R T
Sbjct: 699 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 758
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L L+D G V+ WG G G+LG G + G + P + + +N G
Sbjct: 759 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER--LNGQG 799
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
V +I CG + S +T +G + T+G G Y
Sbjct: 800 ------VCQIECGAQFSLALTKSGVVWTWGKGDY 827
Score = 40.8 bits (94), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 1635 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 1694
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 1695 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 1738
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A +G TL L+D VW WG G G+LG G + G P
Sbjct: 1739 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 1781
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 1782 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 1819
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 1645 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 1696
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 1697 ACVTAAGDLYTWG 1709
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 833 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 886
>gi|259089405|ref|NP_001158608.1| probable E3 ubiquitin-protein ligase HERC6 isoform 2 [Homo sapiens]
gi|55832764|gb|AAV66895.1| HERC6 splice variant [Homo sapiens]
Length = 986
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 61/149 (40%), Gaps = 36/149 (24%)
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE- 263
++TLN +KI +V+ G H+L LS QV+ WG GQLGLG +P + LE
Sbjct: 122 IMTLN-DIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEG 180
Query: 264 --------------------------------HAASGKDRPLLVRQGSVNSSGKAGRSYV 291
A SG++ P V+ S G V
Sbjct: 181 IPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVP--VQSNKPLSVGALKNLGV 238
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
I+CG H+AV+T G + TFG GQ
Sbjct: 239 VYISCGDAHTAVLTQDGKVFTFGDNRSGQ 267
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 31/132 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASG 268
+ V+ G H+L + G+V+ WG G EGQLG+G ++ TP I L + G
Sbjct: 77 VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCG 136
Query: 269 KDRPLLVRQGSV------NSSGKAG--------------RSY----VKEIACGGRHSAVV 304
L + + S NS G+ G RS + ++A GG HS +
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 196
Query: 305 TDAGALLTFGWG 316
+ G +FGWG
Sbjct: 197 SLCGT--SFGWG 206
>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase, partial [Rhipicephalus pulchellus]
Length = 1181
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 107/276 (38%), Gaps = 89/276 (32%)
Query: 51 SWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGET---PEPFPLPTEAS 105
S ++ CG A LA S++G++ +WG + GQ L G E+ P+
Sbjct: 139 SAHEIRAVACGEAHSLALSDAGQVFSWG-CNRNGQ--LGCGTEEESRLRPKVIKKLATLH 195
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
+V+ A G HC+++ GE+++WG G G +DSTG + LP
Sbjct: 196 IVQIACGAVHCLALANNGELFSWGGNAS----------GQLG-LGRDSTGNER-LP---- 239
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
+R V GV + VA G H++
Sbjct: 240 ----RRVSHLV----------------------------------GVPLALVACGAMHSV 261
Query: 226 ILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L+ G V+ WG GQLGL R ++ PT +PL
Sbjct: 262 GLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVL-------------KPL----------- 297
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
++ R +K + CG H+A +T G + TFG G YGQ
Sbjct: 298 RSQR--IKHVCCGENHTAALTADGGVFTFGAGTYGQ 331
>gi|219128407|ref|XP_002184405.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404206|gb|EEC44154.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 643
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 131/316 (41%), Gaps = 27/316 (8%)
Query: 22 VYMWGYLPGTSPEK-SPILSPIPARLCGGDSWKDVCGGGC--GFALATSESGKLITWGSA 78
VY G L G + P+ PIP + + + C G G A+ + +G G
Sbjct: 86 VYQTGTLHGVVYKTPVPVTIPIPRKCVEIAAGRHFCLGRMEGGLAVVSWGAGHFGQLGLG 145
Query: 79 DDEGQSYLTSGKHGETPEP------FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
EG S +T TP P P + V++ A G H ++++ +G V+ WG
Sbjct: 146 HAEGNSQITF-----TPYPIVMQRLLPRVIGSPVLQVACGSWHGLALSASGRVWAWGSNR 200
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTE--QAPPSDKRAGEEVVKRRKT----SSAR 186
+ + +AGS + +P E + R+ + R + S+A
Sbjct: 201 TQQCGR--KPTLTAGSNHAPTVLVPLPVPLEVMATQIAAGRSHSVAIARDQVYCWGSTAH 258
Query: 187 EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
+ N S +P LV + + VAA G HTL L++ G+V+ WG EGQLG
Sbjct: 259 GQCGN--SARRGGVTAPRLVEGLANLTVEHVAANGNHTLALTNGGRVFAWGSNAEGQLGT 316
Query: 247 GSRIKMVPTPHLIPCLEHAA--SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
G P P + ++ A +GK+ + V++S + + + G +SA V
Sbjct: 317 GPACAAQPKPRHVGDVDFVAIEAGKEWK-ANKFAEVSASALSSVPRIASVYAGASYSAAV 375
Query: 305 TDAGALLTFGWGLYGQ 320
+ +G + T+G GQ
Sbjct: 376 STSGHVYTWGSNDVGQ 391
>gi|383861352|ref|XP_003706150.1| PREDICTED: uncharacterized protein LOC100881287 [Megachile rotundata]
Length = 1884
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 57/210 (27%), Positives = 79/210 (37%), Gaps = 61/210 (29%)
Query: 54 DVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
+V CG LA + +G + WGS+ GQ L TPE + ++ A A
Sbjct: 874 EVLSVSCGHCHTLAVTNNG-VYAWGSSR-FGQLGLGKILQCSTPELITYLAQEVIIDAVA 931
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G H V++T G V+TWGW G G +T K+
Sbjct: 932 GQYHSVALTADGRVFTWGW-------------GVHGQLGHGNTDKK-------------- 964
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ P L+T G I ++AG HTL LS G
Sbjct: 965 -----------------------------IVPTLITSLLGTVIRYISAGHAHTLALSTEG 995
Query: 232 QVWGWGYGGEGQLGLGSRIK-MVPTPHLIP 260
V+ +G GQLG+GS +K VP L+P
Sbjct: 996 IVYAFGCNIFGQLGVGSNVKSSVPIKVLLP 1025
Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 26/109 (23%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
V++ V+ G HTL +++ G V+ WG GQLGLG +I TP LI L
Sbjct: 873 VEVLSVSCGHCHTLAVTNNG-VYAWGSSRFGQLGLG-KILQCSTPELITYL--------- 921
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ + + G HS +T G + T+GWG++GQ
Sbjct: 922 ---------------AQEVIIDAVAGQYHSVALTADGRVFTWGWGVHGQ 955
Score = 43.5 bits (101), Expect = 0.15, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 25/119 (21%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P L+T I AG H++ L+ G+V+ WG+G GQLG G+ K + P LI
Sbjct: 914 TPELITYLAQEVIIDAVAGQYHSVALTADGRVFTWGWGVHGQLGHGNTDKKI-VPTLITS 972
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
L G+V ++ I+ G H+ ++ G + FG ++GQ
Sbjct: 973 L--------------LGTV----------IRYISAGHAHTLALSTEGIVYAFGCNIFGQ 1007
>gi|145528624|ref|XP_001450106.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417706|emb|CAK82709.1| unnamed protein product [Paramecium tetraurelia]
Length = 387
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 102/250 (40%), Gaps = 65/250 (26%)
Query: 93 ETPEPFPLPTEAS-----VVKAAAGWAHCVSVTEAGE---VYTWGWRECVPSAKVTRDFG 144
TP F + +EAS + K A G H V++ E E ++ WG
Sbjct: 95 NTPTLFDIFSEASQYGWQLQKIAVGLDHSVALIEVEEENKIFVWG--------------- 139
Query: 145 SAGSFQK---DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF-- 199
+ ++Q+ D++ + A+P + + R + + T + EE + G F
Sbjct: 140 -SNTYQQLGFDASEQFVAIPHQLDSDNLPRIVDIYAQHNYTMAIDEEGRIFSWGSNEFGR 198
Query: 200 ----TLSPCLVTLNP-----GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
+ C+ +P KI K+A G H L + G ++ WG G +GQLG G+
Sbjct: 199 LGQNAFAKCMKLPSPITSLGNAKIAKLALGTFHVLAIDTQGNLYSWGRGLQGQLGHGN-- 256
Query: 251 KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGAL 310
++ ++P + SS +A ++E+ CG HS + + G++
Sbjct: 257 ---------------SNDCNKPTQI------SSLQA----IREVTCGEAHSMALQNNGSV 291
Query: 311 LTFGWGLYGQ 320
FG G +GQ
Sbjct: 292 YVFGSGQFGQ 301
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 31/69 (44%)
Query: 61 GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
+ +A E G++ +WGS + K + P P A + K A G H +++
Sbjct: 177 NYTMAIDEEGRIFSWGSNEFGRLGQNAFAKCMKLPSPITSLGNAKIAKLALGTFHVLAID 236
Query: 121 EAGEVYTWG 129
G +Y+WG
Sbjct: 237 TQGNLYSWG 245
>gi|115374127|ref|ZP_01461415.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115368903|gb|EAU67850.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 479
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 87/218 (39%), Gaps = 36/218 (16%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +LA G + WG +D GQ L +G +P P P+P + VV AAG H +
Sbjct: 227 GGYMHSLALCADGTVWAWGF-NDYGQ--LGNGTTVHSPTPVPVPGLSQVVSVAAGGFHSL 283
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++ G V+ WG FG G A+ T++ P EVV
Sbjct: 284 ALCADGTVWAWG----------NNGFGQLGE----------AVSTQRTKPGRVEGLREVV 323
Query: 178 KR----------RKTSSAREESENPAS--GDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
R S N + G+ F+ S + +T VAAGG H++
Sbjct: 324 AVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARPAPVQGLGAVTSVAAGGMHSV 383
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
+ G VW WG EGQLG R TP +P L+
Sbjct: 384 AVQADGTVWAWGRNEEGQLGH-ERAPERATPVRVPGLQ 420
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 106/284 (37%), Gaps = 42/284 (14%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG ++LA G + GS + GQ L +G P P+P + V AAG +H +
Sbjct: 127 GGYQYSLALHADGTVWACGS-NSAGQ--LGNGTTAARSAPRPVPGLSRAVAVAAGGSHAL 183
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ--APPSDKRAGEE 175
++ G V+ WG +G G+ +P Q +
Sbjct: 184 ALCADGTVWAWG----------NNGYGQLGNGSTAHRATPVQVPGLQGVVAVAGGYMHSL 233
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV-KITKVAAGGRHTLILSDMGQVW 234
+ T A ++ G+ SP V + PG+ ++ VAAGG H+L L G VW
Sbjct: 234 ALCADGTVWAWGFNDYGQLGNGTTVHSPTPVPV-PGLSQVVSVAAGGFHSLALCADGTVW 292
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEH---AASGKDRPLLVR--------------- 276
WG G GQLG + P + L A G L VR
Sbjct: 293 AWGNNGFGQLGEAVSTQRT-KPGRVEGLREVVAVAGGFYHSLAVRAGGSLWSWGNNYSGQ 351
Query: 277 --QGSVNSSGK----AGRSYVKEIACGGRHSAVVTDAGALLTFG 314
GS +SS + G V +A GG HS V G + +G
Sbjct: 352 LGNGSFSSSARPAPVQGLGAVTSVAAGGMHSVAVQADGTVWAWG 395
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 57/136 (41%), Gaps = 26/136 (19%)
Query: 210 PGV-KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE---HA 265
PG+ + VAAGG H L L G VW WG G GQLG GS TP +P L+
Sbjct: 167 PGLSRAVAVAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRA-TPVQVPGLQGVVAV 225
Query: 266 ASGKDRPL-LVRQGSV-----NSSGKAGR---------------SYVKEIACGGRHSAVV 304
A G L L G+V N G+ G S V +A GG HS +
Sbjct: 226 AGGYMHSLALCADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLSQVVSVAAGGFHSLAL 285
Query: 305 TDAGALLTFGWGLYGQ 320
G + +G +GQ
Sbjct: 286 CADGTVWAWGNNGFGQ 301
>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase [Rhipicephalus pulchellus]
Length = 1175
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 107/276 (38%), Gaps = 89/276 (32%)
Query: 51 SWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGET---PEPFPLPTEAS 105
S ++ CG A LA S++G++ +WG + GQ L G E+ P+
Sbjct: 133 SAHEIRAVACGEAHSLALSDAGQVFSWG-CNRNGQ--LGCGTEEESRLRPKVIKKLATLH 189
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
+V+ A G HC+++ GE+++WG G G +DSTG + LP
Sbjct: 190 IVQIACGAVHCLALANNGELFSWGGNAS----------GQLG-LGRDSTGNER-LP---- 233
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
+R V GV + VA G H++
Sbjct: 234 ----RRVSHLV----------------------------------GVPLALVACGAMHSV 255
Query: 226 ILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L+ G V+ WG GQLGL R ++ PT +PL
Sbjct: 256 GLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVL-------------KPL----------- 291
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
++ R +K + CG H+A +T G + TFG G YGQ
Sbjct: 292 RSQR--IKHVCCGENHTAALTADGGVFTFGAGTYGQ 325
>gi|320163137|gb|EFW40036.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 2579
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 53/108 (49%), Gaps = 25/108 (23%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+I +VA G HTL L+D G+VW G+G +GQLG+GS L+P
Sbjct: 1587 RIIQVACGYFHTLFLTDKGEVWACGWGAQGQLGVGSTSNA-----LLP------------ 1629
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V +++ G G +A G HS V+T++G L FG YGQ
Sbjct: 1630 --VHVKILDNKGIVG------LAAGFCHSVVLTESGTLYAFGGNSYGQ 1669
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 20/108 (18%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+I ++ G HT+ +++ G V+ WG G GQLGLG K P ++ LE P
Sbjct: 1530 RIASISCGAEHTVAITNEGMVYAWGANGYGQLGLGDTDKRT-KPTMLSRLE--------P 1580
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+++ + S + ++ACG H+ +TD G + GWG GQ
Sbjct: 1581 VVMHE-----------SRIIQVACGYFHTLFLTDKGEVWACGWGAQGQ 1617
>gi|159036732|ref|YP_001535985.1| cell wall anchor domain-containing protein [Salinispora arenicola
CNS-205]
gi|157915567|gb|ABV96994.1| LPXTG-motif cell wall anchor domain [Salinispora arenicola CNS-205]
Length = 566
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 104/289 (35%), Gaps = 54/289 (18%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
GG G +LA + +G ++ WG D GQ + TP LPT V AAG H
Sbjct: 94 IAGGDGHSLALTSTGSVLAWGDNSD-GQLGDGTTTDTTTPVAVDLPTGTEVTAIAAGNDH 152
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA-----LPTEQAPPSDK 170
+++T G V WG S G +T S LPT +
Sbjct: 153 SLALTSTGSVLAWGDN-------------SDGQLGDGTTTDTSTPVTVDLPTTTTATAIS 199
Query: 171 RAGEEVVKRRKTSSARE--ESENPASGDE--FFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
+ + T A ++ GDE T +P V L PG + VA G H+L
Sbjct: 200 AGADYSLSLSSTGGAFAWGNNDQGQLGDETTLSTSTPVNVALQPGTTLLAVAGGSGHSLA 259
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
++ WG +GQLG G+ T L P A G +
Sbjct: 260 ITSDNAAIAWGDNSQGQLGDGTT-----TDALAPVNVALAPGTE---------------- 298
Query: 287 GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQRMAKCLAGDGINMGS 335
+ +A G HS +T AG T+G GQ G+G N S
Sbjct: 299 ----ITAVAAGRLHSVALTSAGTAFTWGNNASGQL------GNGTNTTS 337
>gi|145593730|ref|YP_001158027.1| cell wall anchor domain-containing protein [Salinispora tropica
CNB-440]
gi|145303067|gb|ABP53649.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
Length = 558
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 114/293 (38%), Gaps = 58/293 (19%)
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFP--LPTEASVVKAAAGWAHCVSVTEAGEVY 126
S ++ WG +D GQ L G ++ EP LPT +V AAG H V++T AG V
Sbjct: 53 SDAILAWG-GNDGGQ--LGDGTTTDSSEPIAVRLPTGTTVAAVAAGDRHSVALTSAGTVL 109
Query: 127 TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR------AGEEVVKRR 180
WG G G+ S+G+ P + PS R + +
Sbjct: 110 AWGRNT----------EGQLGNGTTTSSGE----PVAVSLPSGIRIVAVAVGADHSLALT 155
Query: 181 KTSSAREESENPAS--GDEFFTLS--PCLVTLNPGVKITKVAAGGRHTLILSDMG--QVW 234
T S N GD T S P V L P + +AAG H L+L+ G +
Sbjct: 156 STGSLLAWGSNDTGQLGDGSVTSSSTPVAVRLPPNTTVAAIAAGRDHNLVLTATGPAALL 215
Query: 235 GWGYGGEGQLGLGSRI-KMVPTPHLIP---CLEHAASGKDRPL-LVRQGSV-----NSSG 284
WG EGQLG G+ + + P P +P + A G+D L L +V NS G
Sbjct: 216 AWGANREGQLGDGTVVDRSRPVPVNLPTGLTVTAIAGGRDHSLALTSDDTVLAWGGNSHG 275
Query: 285 KAGR-----------------SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ G + IA G HS +T G L +G +GQ
Sbjct: 276 QLGDGTTTGSLLPVTVVLPVGAEATAIAAGRLHSLALTSDGTALAWGGNHWGQ 328
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 76/207 (36%), Gaps = 37/207 (17%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA + +G L+ WGS +D GQ S TP LP +V AAG H +
Sbjct: 147 GADHSLALTSTGSLLAWGS-NDTGQLGDGSVTSSSTPVAVRLPPNTTVAAIAAGRDHNLV 205
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+T G W G+ ++ G + + + P + G V
Sbjct: 206 LTATGPAALLAW----------------GANREGQLGDGTVVDRSRPVPVNLPTGLTVTA 249
Query: 179 RRKTSSAREESENPASGDEFF-----------------TLSPCLVTLNPGVKITKVAAGG 221
+ R+ S S D +L P V L G + T +AAG
Sbjct: 250 ---IAGGRDHSLALTSDDTVLAWGGNSHGQLGDGTTTGSLLPVTVVLPVGAEATAIAAGR 306
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGS 248
H+L L+ G WG GQLG GS
Sbjct: 307 LHSLALTSDGTALAWGGNHWGQLGNGS 333
>gi|350408000|ref|XP_003488267.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
impatiens]
Length = 534
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 104/274 (37%), Gaps = 65/274 (23%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + ++ +VY G GT + + LCG D K G LA
Sbjct: 34 NEALIITRDKIVYALGSNTSGCLGTGDDCNTFYPKKVEALCGKD-IKTFAYGKGPHVLAL 92
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFP---LP-------TEASVVKAAAGWAHC 116
+E GK+ +WG HGE F +P ++ +V A G H
Sbjct: 93 TEEGKVYSWGH-----------NSHGELGNCFANNMIPMLVTRNLSDEFIVDIACGSHHS 141
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK--QSALPTEQAP--PSDKRA 172
+++T G+VY WG ++++G+ +S E P + A
Sbjct: 142 LALTNEGKVYAWG---------------------ENTSGQVGKSVNINENTPMKVNSSLA 180
Query: 173 GEEVVKRRKTSSAREESENPAS--------------GDEFFTLSPCLVTLNPGVKITKVA 218
G+ V+ S+ + G+ + PC VT+ GV I K+
Sbjct: 181 GKTVICISCGQSSSMTVTDTGKVYGWGCNDVGQLGIGNYVNQVDPCKVTMLAGVVIEKIV 240
Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
G H L LS+ G ++ WG GQLGLG ++ +
Sbjct: 241 CGYAHVLALSNKGALYVWGGNNYGQLGLGMKMNI 274
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 66/152 (43%), Gaps = 31/152 (20%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLG---LGSR 249
+GD+ T P V G I A G G H L L++ G+V+ WG+ G+LG +
Sbjct: 58 TGDDCNTFYPKKVEALCGKDIKTFAYGKGPHVLALTEEGKVYSWGHNSHGELGNCFANNM 117
Query: 250 IKMVPTPHLIP-CLEHAASGKDRPL-LVRQGSV-----NSSGKAGRSY------------ 290
I M+ T +L + A G L L +G V N+SG+ G+S
Sbjct: 118 IPMLVTRNLSDEFIVDIACGSHHSLALTNEGKVYAWGENTSGQVGKSVNINENTPMKVNS 177
Query: 291 ------VKEIACGGRHSAVVTDAGALLTFGWG 316
V I+CG S VTD G + +GWG
Sbjct: 178 SLAGKTVICISCGQSSSMTVTDTGKV--YGWG 207
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 25/110 (22%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G + ++ G ++ ++D G+V+GWG GQLG+G+ + V PC
Sbjct: 181 GKTVICISCGQSSSMTVTDTGKVYGWGCNDVGQLGIGNYVNQVD-----PC--------- 226
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ + G V +++I CG H +++ GAL +G YGQ
Sbjct: 227 -KVTMLAGVV----------IEKIVCGYAHVLALSNKGALYVWGGNNYGQ 265
>gi|157821577|ref|NP_001101850.1| RCC1 and BTB domain-containing protein 1 [Rattus norvegicus]
gi|149064107|gb|EDM14377.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Rattus norvegicus]
Length = 531
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 102/253 (40%), Gaps = 49/253 (19%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT +S ++ LCG K + G L ++E G + WG G S L +G
Sbjct: 55 GTGDNQSTLVPKKLEALCG-KRIKSLSYGSGPHVLLSTEDGVVYAWGH---NGYSQLGNG 110
Query: 90 KHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
+ P + T VV+ A G H +++ GE++ WG+ C G
Sbjct: 111 TTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNC----------GQV 160
Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD--EFF----- 199
GS ST Q P+ ++ + ++ + A ++ + A D E +
Sbjct: 161 GS---GSTANQ---------PTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYN 208
Query: 200 ------------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
L+P V GV + ++ G HTL L+D G ++ WG GQLG G
Sbjct: 209 GNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268
Query: 248 SRIKMV-PTPHLI 259
S+ ++ PT ++
Sbjct: 269 SKNNLLSPTQIMV 281
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 66/150 (44%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
++P V N VK + +VA G H++ L+ G+++ WGY GQ+G GS PTP +
Sbjct: 116 IAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ-PTPRKV 174
Query: 260 P-CLE-----HAASGKDRPLLVRQ-GSV-----NSSGKAGRSY----------------- 290
CL + A G+ + V G V N +G+ G
Sbjct: 175 TNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGVC 234
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V +I CG H+ +TD G L +G YGQ
Sbjct: 235 VNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 25/128 (19%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD TL P + G +I ++ G G H L+ ++ G V+ WG+ G QLG G+ +
Sbjct: 56 TGDNQSTLVPKKLEALCGKRIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQG 115
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
+ + LLV+Q V E+ACG HS + G L
Sbjct: 116 IAPIQVCT-----------NLLVKQ-------------VVEVACGSHHSMALAADGELFA 151
Query: 313 FGWGLYGQ 320
+G+ GQ
Sbjct: 152 WGYNNCGQ 159
>gi|383319169|ref|YP_005380010.1| chromosome condensation regulator RCC1 [Methanocella conradii
HZ254]
gi|379320539|gb|AFC99491.1| regulator of chromosome condensation RCC1 [Methanocella conradii
HZ254]
Length = 438
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 111/288 (38%), Gaps = 53/288 (18%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G G ++A ++G + TWG + G Y S + P+ P+ SV +A +
Sbjct: 49 GHGLSVALLDNGTVWTWGHSWHGGLGY-ESVQDQYVPKRVPIYNVTSVDSC---FASVAA 104
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+ + G V+TWGW E +G G D T P + RA +
Sbjct: 105 LKDDGTVWTWGWNE----------YGQLG----DGTTMDHNTPGMVGGLGNVRAVAVGIS 150
Query: 179 RRKT--------SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
+ + G +++P V+ P +I ++AG H L + D
Sbjct: 151 HMLALGNDGTVWAWGKNNCGQLGDGTNVDSMTPVRVSGLP--RIVAISAGYNHNLAIDDA 208
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH---AASGKDRPLLVR-QGSV-----N 281
G VW WG GQLG G+ I P P + L + A G L ++ G++ N
Sbjct: 209 GNVWTWGLNDCGQLGDGTNISS-PNPKKVKGLANVTAVAGGSSFSLALKDDGTIWAWGSN 267
Query: 282 SSGKAGRSYVKE---------------IACGGRHSAVVTDAGALLTFG 314
G+ G K+ IA GG SA +T+ G+L +G
Sbjct: 268 VQGELGVGTTKDCPLPVKVQGLTNVIRIAAGGETSAAITNDGSLWVWG 315
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
V+ WG G + + I SP P ++ G + V GG F+LA + G + WGS
Sbjct: 211 VWTWGLNDCGQLGDGTNISSPNPKKVKGLANVTAVAGGSS-FSLALKDDGTIWAWGS--- 266
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
Q L G + P P + +V++ AAG ++T G ++ WG E
Sbjct: 267 NVQGELGVGTTKDCPLPVKVQGLTNVIRIAAGGETSAAITNDGSLWVWGHNE 318
>gi|310825568|ref|YP_003957926.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|309398640|gb|ADO76099.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 482
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 87/218 (39%), Gaps = 36/218 (16%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +LA G + WG +D GQ L +G +P P P+P + VV AAG H +
Sbjct: 230 GGYMHSLALCADGTVWAWGF-NDYGQ--LGNGTTVHSPTPVPVPGLSQVVSVAAGGFHSL 286
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++ G V+ WG FG G A+ T++ P EVV
Sbjct: 287 ALCADGTVWAWG----------NNGFGQLGE----------AVSTQRTKPGRVEGLREVV 326
Query: 178 KR----------RKTSSAREESENPAS--GDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
R S N + G+ F+ S + +T VAAGG H++
Sbjct: 327 AVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARPAPVQGLGAVTSVAAGGMHSV 386
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
+ G VW WG EGQLG R TP +P L+
Sbjct: 387 AVQADGTVWAWGRNEEGQLGH-ERAPERATPVRVPGLQ 423
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 106/284 (37%), Gaps = 42/284 (14%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG ++LA G + GS + GQ L +G P P+P + V AAG +H +
Sbjct: 130 GGYQYSLALHADGTVWACGS-NSAGQ--LGNGTTAARSAPRPVPGLSRAVAVAAGGSHAL 186
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ--APPSDKRAGEE 175
++ G V+ WG +G G+ +P Q +
Sbjct: 187 ALCADGTVWAWG----------NNGYGQLGNGSTAHRATPVQVPGLQGVVAVAGGYMHSL 236
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV-KITKVAAGGRHTLILSDMGQVW 234
+ T A ++ G+ SP V + PG+ ++ VAAGG H+L L G VW
Sbjct: 237 ALCADGTVWAWGFNDYGQLGNGTTVHSPTPVPV-PGLSQVVSVAAGGFHSLALCADGTVW 295
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEH---AASGKDRPLLVR--------------- 276
WG G GQLG + P + L A G L VR
Sbjct: 296 AWGNNGFGQLGEAVSTQRT-KPGRVEGLREVVAVAGGFYHSLAVRAGGSLWSWGNNYSGQ 354
Query: 277 --QGSVNSSGK----AGRSYVKEIACGGRHSAVVTDAGALLTFG 314
GS +SS + G V +A GG HS V G + +G
Sbjct: 355 LGNGSFSSSARPAPVQGLGAVTSVAAGGMHSVAVQADGTVWAWG 398
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 57/136 (41%), Gaps = 26/136 (19%)
Query: 210 PGV-KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE---HA 265
PG+ + VAAGG H L L G VW WG G GQLG GS TP +P L+
Sbjct: 170 PGLSRAVAVAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRA-TPVQVPGLQGVVAV 228
Query: 266 ASGKDRPL-LVRQGSV-----NSSGKAGR---------------SYVKEIACGGRHSAVV 304
A G L L G+V N G+ G S V +A GG HS +
Sbjct: 229 AGGYMHSLALCADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLSQVVSVAAGGFHSLAL 288
Query: 305 TDAGALLTFGWGLYGQ 320
G + +G +GQ
Sbjct: 289 CADGTVWAWGNNGFGQ 304
>gi|260791114|ref|XP_002590585.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
gi|229275780|gb|EEN46596.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
Length = 710
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 46/104 (44%), Gaps = 26/104 (25%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
VA G HTLI + G+V+ WG G EGQLGLG P L+ A S
Sbjct: 92 VACGRSHTLIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLLDFDSKAIS--------- 142
Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
++CG H+AVVT+ G L TFG YG+
Sbjct: 143 -----------------VSCGYYHTAVVTEDGNLYTFGETEYGK 169
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 24/108 (22%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
K+ V GG HT +++ G V+ +G G GQLG G+ + PTPH + A
Sbjct: 192 KVKFVVCGGGHTTAIAESGAVYTFGNGASGQLGHGNSLLESPTPHRVERFRDAD------ 245
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
K +CG +AV+T G L TFG G +G+
Sbjct: 246 ------------------CKHASCGENFTAVITGKGHLYTFGDGRHGK 275
>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
Length = 4253
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 76/283 (26%), Positives = 112/283 (39%), Gaps = 73/283 (25%)
Query: 13 KMEECKETVVYMWG----YLPGTS-PEKS--PILSPIPA--------RLCGGDS------ 51
+ + KE+ VY+WG Y G S PEK P L+P A RL GDS
Sbjct: 398 QTDHVKESHVYVWGSNSSYQLGISEPEKMLIPHLTPSFANSEQGNYGRLGLGDSSNQNRP 457
Query: 52 ----WKDVCG--------GGCGFALATSESGKLITWGSADDEGQSYLTSGKH--GETPEP 97
++ C G G LA + G++ +WG D L G H ++P+
Sbjct: 458 KLIRFEHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGD---YGKLGHGNHVTQKSPKL 514
Query: 98 FPLPTEASVVKA-AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG--------- 147
P + VV+ A G+ H ++T G +YTWG D+G G
Sbjct: 515 ILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWG----------DGDYGRLGHGDNHSRSI 564
Query: 148 -SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT---SSAREESENPASGDEFFTLSP 203
+ KD TG S S + V+ + T S ++ GD P
Sbjct: 565 PTLVKDITGVGSV--------SCGSSFTVVISQDATTVWSFGAGDNGKLGHGDTSRVYRP 616
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG---GEGQ 243
+++ G+ I KV + +L L+ +GQV+ WG G G GQ
Sbjct: 617 KVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSGPCLGYGQ 659
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 24/98 (24%)
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
HTL ++ G+++ WG G G+LG G+ + +P LI L QG V
Sbjct: 480 HTLAIASDGRIYSWGDGDYGKLGHGNHVTQ-KSPKLI-------------LGPMQGKV-- 523
Query: 283 SGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V++IA G RHSA +T G L T+G G YG+
Sbjct: 524 --------VRQIAVGYRHSAAITSEGLLYTWGDGDYGR 553
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 41/96 (42%), Gaps = 25/96 (26%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
I +AAG H L L+ G VW WG +GQLGLG + P PCL + GK
Sbjct: 3704 IEDIAAGYEHALALTKEGDVWSWGNDTDGQLGLGQTL-----PQREPCLISSLQGKG--- 3755
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGA 309
+++I+ G HSA T A A
Sbjct: 3756 -----------------IRQISAGHNHSAAWTVAPA 3774
Score = 48.1 bits (113), Expect = 0.006, Method: Composition-based stats.
Identities = 70/273 (25%), Positives = 102/273 (37%), Gaps = 52/273 (19%)
Query: 86 LTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WRECVPSAKVTRD 142
+TS K E P+ L + +++ ++ E YTWG + S ++
Sbjct: 3370 ITSTKENEILPPWKLAMDREIIEWVTDRPQDWKMSAKCEAYTWGGGRHGQLAESGRLVLQ 3429
Query: 143 FGSAGSFQKDST---GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF 199
SF K G S E V+ + S R N D+
Sbjct: 3430 PTLTSSFSKAKQIHCGHNSTFVIEH--------DGTVLACGEGSYGRLGQGN---SDDLP 3478
Query: 200 TLSPCLVTLNPGVKITKVAAGGR---HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
L P +T G +T++A H+L L++ G+V+ WG G G+LG G+ + P
Sbjct: 3479 RLRP--ITALQGFVVTELATSTGLEGHSLALTETGEVFSWGDGDYGKLGHGNSERQ-RRP 3535
Query: 257 HLIPCLE-----HAASGKDRPLLV---------------RQGSVNSSGKAGRSYVKE--- 293
I L H A G +V R G N+S K + V
Sbjct: 3536 RQIEALRGEDVLHVACGHKHSAIVTVDGKLFTFGASDLGRLGLGNTSNKKLPAQVTALQP 3595
Query: 294 -----IACGGRHSAVV-TDAGALLTFGWGLYGQ 320
IACG H+ VV TD ++ TFG G YGQ
Sbjct: 3596 IMVELIACGANHTVVVTTDRESVWTFGEGEYGQ 3628
Score = 43.9 bits (102), Expect = 0.12, Method: Composition-based stats.
Identities = 58/259 (22%), Positives = 88/259 (33%), Gaps = 91/259 (35%)
Query: 61 GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHC 116
G +LA +E+G++ +WG D Y G + P EA V+ A G H
Sbjct: 3502 GHSLALTETGEVFSWGDGD-----YGKLGHGNSERQRRPRQIEALRGEDVLHVACGHKHS 3556
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
VT G+++T+G D G G S+K+ +V
Sbjct: 3557 AIVTVDGKLFTFG----------ASDLGRLG----------------LGNTSNKKLPAQV 3590
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWG 235
L P +V L +A G HT++++ D VW
Sbjct: 3591 T----------------------ALQPIMVEL--------IACGANHTVVVTTDRESVWT 3620
Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
+G G GQLGLG R TP + + +K+I
Sbjct: 3621 FGEGEYGQLGLG-RTTAKMTPQYVDAFS------------------------KLNIKKIC 3655
Query: 296 CGGRHSAVVTDAGALLTFG 314
CG R + +T G + + G
Sbjct: 3656 CGARFTLALTKEGKVYSCG 3674
>gi|345323514|ref|XP_003430715.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Ornithorhynchus anatinus]
Length = 806
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 27/115 (23%)
Query: 208 LNPGV--KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
L PG+ K+ +VA GG HT+ L++ V+ +G G GQLGLG+ I P ++ EH
Sbjct: 323 LVPGISGKVNQVACGGGHTVALTEE-DVYTFGLGEFGQLGLGTCIFETSVPKVV---EHL 378
Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
K + +ACG H+A+++D G + TFG G +G+
Sbjct: 379 RKQK---------------------IHYVACGENHTALISDTGLMYTFGDGRHGK 412
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 58/139 (41%), Gaps = 31/139 (22%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--------RIKMVPT 255
C+ L P K+ A G HTL+ ++ G V+ G +GQLGLG +I +
Sbjct: 166 CVKALKPE-KVKFAACGRNHTLVCTEGGNVYAAGGNSDGQLGLGDTEERTTFHQISFFTS 224
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSY---------------VKEIA 295
+ I L +A L G + NS G+ G + V ++
Sbjct: 225 RYKIKQL--SAGSNTSAALTEDGELYMWGDNSEGQIGLASESNVCVPCRVVIGKPVSWVS 282
Query: 296 CGGRHSAVVTDAGALLTFG 314
CG HSA+VT G L TFG
Sbjct: 283 CGYYHSALVTTDGELYTFG 301
>gi|326674002|ref|XP_001334658.4| PREDICTED: RCC1 and BTB domain-containing protein 2 [Danio rerio]
Length = 527
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 31/150 (20%)
Query: 201 LSPCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L+P LV+ N G ++T+V+ G HT+ L+ G+V+ WGY GQ+G GS PTP +
Sbjct: 116 LTPALVSTNLIGKRVTEVSCGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQ-PTPRRV 174
Query: 260 -PCLE-----HAASGKDRPLLVRQG------SVNSSGKAGRS-----------------Y 290
CL+ + A G+ + V N +G+ G
Sbjct: 175 SSCLQNKVVVNIACGQLCSMAVLDNGETYGWGYNCNGQLGLGNNGNQQTPCRIAALQGIN 234
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ ++ACG H+ +TD G + ++G YGQ
Sbjct: 235 IIQVACGYAHTLALTDEGFVYSWGANSYGQ 264
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 89/224 (39%), Gaps = 31/224 (13%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG--KHGETPEPFPLPTE 103
LCG G G +AT++ G++ WG G S L +G HG TP
Sbjct: 71 LCGKKIISLSYGTGPHVVIATAD-GEVYAWGH---NGYSQLGNGTTNHGLTPALVSTNLI 126
Query: 104 AS-VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
V + + G H +++T GEVY WG + ++G ST Q
Sbjct: 127 GKRVTEVSCGSHHTIALTTDGEVYAWG-------------YNNSGQVGSGSTANQPTPRR 173
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGV 212
+ +K + + + + E G+ +PC + G+
Sbjct: 174 VSSCLQNKVVVNIACGQLCSMAVLDNGETYGWGYNCNGQLGLGNNGNQQTPCRIAALQGI 233
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPT 255
I +VA G HTL L+D G V+ WG GQLG G++ + VPT
Sbjct: 234 NIIQVACGYAHTLALTDEGFVYSWGANSYGQLGTGNKSNQAVPT 277
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 22/173 (12%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S P P R+ K V CG ++A ++G+ WG
Sbjct: 149 VYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGETYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ L + + +TP ++++ A G+AH +++T+ G VY+WG
Sbjct: 208 NCNGQLGLGNNGNQQTPCRIAALQGINIIQVACGYAHTLALTDEGFVYSWG--------- 258
Query: 139 VTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
A S+ + TG +S A+PT ++ TS+A+ +S
Sbjct: 259 -------ANSYGQLGTGNKSNQAVPTLINMDKERMVEVAACHTSHTSAAKTQS 304
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 25/127 (19%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + + G KI ++ G G H +I + G+V+ WG+ G QLG G+
Sbjct: 57 GDTQSTIEPRRIDILCGKKIISLSYGTGPHVVIATADGEVYAWGHNGYSQLGNGT----- 111
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
T H + P LV S N GK V E++CG H+ +T G + +
Sbjct: 112 -TNHGLT-----------PALV---STNLIGKR----VTEVSCGSHHTIALTTDGEVYAW 152
Query: 314 GWGLYGQ 320
G+ GQ
Sbjct: 153 GYNNSGQ 159
>gi|347972015|ref|XP_001237544.3| AGAP004495-PA [Anopheles gambiae str. PEST]
gi|333469132|gb|EAU76875.3| AGAP004495-PA [Anopheles gambiae str. PEST]
Length = 283
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 58/127 (45%), Gaps = 24/127 (18%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
S + + + TL V+I KV AG H L+L+ G V+ WG G GQLG G + +
Sbjct: 111 STNAIYNIPNLTTTLPKHVRIRKVVAGFEHCLMLTTNGDVYSWGGGLRGQLGNGEIVAV- 169
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTF 313
DRP +V +G AG + +IA G HSA V+ G L T+
Sbjct: 170 ---------------NDRPCVV-------NGLAGVKVI-DIAADGWHSAAVSAFGDLYTW 206
Query: 314 GWGLYGQ 320
GW GQ
Sbjct: 207 GWNNQGQ 213
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS---RIKMVPTPHLI 259
PC+V GVK+ +AA G H+ +S G ++ WG+ +GQLGL R ++V P L+
Sbjct: 173 PCVVNGLAGVKVIDIAADGWHSAAVSAFGDLYTWGWNNQGQLGLQDPQHRERVVSLPQLV 232
>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
[Rhipicephalus pulchellus]
Length = 1480
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+K V +GG+H L LS G+V+ WG G +G+LG G++ S +R
Sbjct: 668 IKKVVVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNK-----------------SSCER 710
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P ++ + GK V ++ACGG HSA +T +G L T+G G YG+
Sbjct: 711 PRVIE----SLRGKE----VVDVACGGAHSACITASGELYTWGKGRYGR 751
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + T H P+ V+ A G HCV+
Sbjct: 834 GSQFSVALTASGSVYTWGKGDYHRLGHGTD-DHVRRPKRVAALQGKKVICIAVGSLHCVA 892
Query: 119 VTEAGEVYTWG 129
T+ GEVYTWG
Sbjct: 893 CTDTGEVYTWG 903
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 76/212 (35%), Gaps = 66/212 (31%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE----ASVVKAAA 111
CG G L ++ + +WG D Y G+ G PL + V++
Sbjct: 779 CGSGDAQTLCVTDDDCVWSWGDGD-----YGKLGRGGSDGCKVPLRVDLLQGMGVIRVEC 833
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G V++T +G VYTWG G + + G
Sbjct: 834 GSQFSVALTASGSVYTWG----------------KGDYHRLGHGT--------------- 862
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
++ V+R K +A + G K+ +A G H + +D G
Sbjct: 863 --DDHVRRPKRVAALQ-----------------------GKKVICIAVGSLHCVACTDTG 897
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
+V+ WG EGQLG G+ + + P L+ L+
Sbjct: 898 EVYTWGDNDEGQLGDGT-VNAIHKPRLVAALQ 928
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
K V G LA S G++ +WG DD G+ + E P VV A G
Sbjct: 670 KVVVNSGGKHCLALSAEGEVYSWGEGDD-GKLGHGNKSSCERPRVIESLRGKEVVDVACG 728
Query: 113 WAHCVSVTEAGEVYTWG 129
AH +T +GE+YTWG
Sbjct: 729 GAHSACITASGELYTWG 745
>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
Length = 3806
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 27/110 (24%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R + D+
Sbjct: 2728 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL-----------------DK 2770
Query: 272 PLLVRQGSVNSSGKAGRS-YVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P LV +A R+ ++++ACG HSA ++ G L T+G G YG+
Sbjct: 2771 PRLV---------EALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 2811
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
G F+LA + +G++ TWG D Y G +H P+P V+ A G
Sbjct: 2894 GAQFSLALTRAGEVWTWGKGD-----YYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGAL 2948
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+AG+VY WG
Sbjct: 2949 HCLAVTDAGQVYAWG 2963
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 106/278 (38%), Gaps = 58/278 (20%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAA---G 112
GG S+ GK+ G + L G P P LP VVK A G
Sbjct: 2680 AGGSKSLFIVSQDGKVYACGEGTN---GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSG 2736
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H +++T G+V++WG E G G + + K + +A K+
Sbjct: 2737 GKHALALTLDGKVFSWGEGE----------DGKLGHGNRTTLDKPRLVEALRA----KKI 2782
Query: 173 GEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
+ +++ + E GD L P LVT G ++ +VA G R
Sbjct: 2783 RDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSR 2842
Query: 223 --HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
TL L++ G V+ WG G G+LG G + G D P + + +
Sbjct: 2843 DAQTLALTEDGAVFSWGDGDFGKLGRG-----------------GSEGSDTPHEIER--L 2883
Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ G V +I CG + S +T AG + T+G G Y
Sbjct: 2884 SGIG------VVQIECGAQFSLALTRAGEVWTWGKGDY 2915
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHC 116
G F++A S G+L TWG A G + G P +V A AHC
Sbjct: 433 AGSQFSVALSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHC 492
Query: 117 VSVTEAGEVYTWG 129
++++ +GEV+ WG
Sbjct: 493 LALSSSGEVFGWG 505
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 27/120 (22%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P LV KI VA G H+ +S G+++ WG G G+LG G T L P L
Sbjct: 2771 PRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN-----TTQLKPKL 2825
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR--HSAVVTDAGALLTFGWGLYGQ 320
A +G+ V ++ACG R + +T+ GA+ ++G G +G+
Sbjct: 2826 VTALAGR--------------------RVVQVACGSRDAQTLALTEDGAVFSWGDGDFGK 2865
>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
Length = 1871
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 83 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 125
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 126 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 166
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 1064 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKDGKLGHGNR---------S 1114
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 1115 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 1157
Query: 319 GQ 320
G+
Sbjct: 1158 GR 1159
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 70 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 128
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 129 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 173
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 174 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 226
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 227 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 285
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTD+G + +G
Sbjct: 286 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDSGQVYAWGDND 321
Query: 318 YGQR 321
+GQ+
Sbjct: 322 HGQQ 325
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 1242 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 1300
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 1301 CTEDGEVYTWG 1311
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 108/280 (38%), Gaps = 61/280 (21%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG--ETPEPFPLPTEAS-----VVKA 109
GG A + GK+ + G A T+G+ G + P+P + + VVK
Sbjct: 34 AGGSKSLFAVTVEGKVYSCGEA--------TNGRLGLGMSSGTVPIPRQITALSSYVVKK 85
Query: 110 AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
A G H ++T G+V++WG D G G F + + K + +
Sbjct: 86 VAVHSGGRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 135
Query: 167 PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
A TSS E GD L P +V + G ++ +VA G
Sbjct: 136 RIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 195
Query: 221 GR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
R TL L+D G V+ WG G G+LG G + G + P + +
Sbjct: 196 SRDAQTLALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNIPQNIER- 237
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+N G V +I CG + S +T +G + T+G G Y
Sbjct: 238 -LNGQG------VCQIECGAQFSLALTKSGVVWTWGKGDY 270
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 1079 VAVNSGGKHCLALSSEGEVYSWGEAKDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 1138
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 1139 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 1182
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A +G TL L+D VW WG G G+LG G + G P
Sbjct: 1183 IDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 1225
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 1226 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 1263
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 276 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT 329
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 36/73 (49%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A D GK G +P P E+ VV AAG AH
Sbjct: 1089 LALSSEGEVYSWGEAKD--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 1140
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 1141 ACVTAAGDLYTWG 1153
>gi|307167569|gb|EFN61119.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
Length = 1546
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 114/274 (41%), Gaps = 26/274 (9%)
Query: 18 KETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITW 75
+E VY W ++ KS + P R+ G S K + CG +LA + GK+ W
Sbjct: 139 EEGEVYYWKFIN----YKSGVEESRPTRV-AGLSEKRIVDIACGSSHSLALTSDGKVYAW 193
Query: 76 GSADDEGQ--SYLTSGKHGETPEPFPLPTEA-SVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
G ++ GQ + T+ +G P E +V+ A G + VT+ ++Y WG E
Sbjct: 194 GE-NNFGQVGNENTAIFNGSVPRQVKHELEKKNVIHIACGLTFNMVVTDENKLYGWGNNE 252
Query: 133 CVPSAKVTRDFGSAG--SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE 190
S +++ D S +F ST ++++ T S K S S
Sbjct: 253 ---SGQISSDNTSFSMTTFNGGSTDHRTSVFTHSLQNSPMFGSSSNSKNLFGCST--TSI 307
Query: 191 NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG----- 245
N + + + KI KVA G HTL L++ +V+ WG GQLG
Sbjct: 308 NNVQSQKHYVYPREITYDMISSKIVKVACGYEHTLALTNNREVFAWGKNHIGQLGGNYNM 367
Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
SR V TP + L+ AA G L V +GS
Sbjct: 368 QSSRPIKVNTPKMREVLDIAAHGN---LSVAEGS 398
Score = 38.5 bits (88), Expect = 4.7, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-----MVPTPHL 258
KI KV G HTL+L++ G V+ WG GQ+G+ K MV P +
Sbjct: 766 KIVKVVCGCMHTLVLTNKGNVYAWGNNCVGQVGVNKGRKPFGPIMVNVPQM 816
Score = 38.1 bits (87), Expect = 6.3, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-----VPTPHLIPCLEHAAS 267
+I K+ G +HTL+L+ G+++ WG GQ+G+ K+ V P + L+ AA
Sbjct: 1239 EIVKLVCGYQHTLVLTRNGKIYAWGNNNFGQVGVNKNRKLSSPTVVNVPEMGKVLDIAAY 1298
Query: 268 G 268
G
Sbjct: 1299 G 1299
>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia
stuttgartiensis]
Length = 1413
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 111/293 (37%), Gaps = 48/293 (16%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A G + WG+ ++ GQ L G + P + V+ A G+AH +
Sbjct: 200 GGAYHTIALKSDGTVWAWGN-NEGGQ--LGDGSTTDRSTPVQVSGLTDVIAIAGGYAHTI 256
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK------R 171
++ G V+ WG E G D + ++P + SD
Sbjct: 257 ALKSDGTVWAWGDNE--------------GGRLGDGSTTNRSIPVKVGGLSDVIAIAGGN 302
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
A +K T A ++E GD T V ++ + +A G HT++L G
Sbjct: 303 AHTIALKSDGTVWAWGDNEGGQLGDGSTTNRSTPVKVSGLADVIAIAGGYSHTIVLRSDG 362
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVRQG---------- 278
VW WG+ GQLG GS TP + L A G + V+
Sbjct: 363 TVWTWGHNEGGQLGDGSTTNR-STPVQVSGLADVIAIAGGVYHTIAVKSDGTMWAWGYNW 421
Query: 279 --------SVNSSGKA---GRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
++NSS G + V IA G H+ + GA+ T+G+ YGQ
Sbjct: 422 YGQLGDGTTINSSTPVQVNGLTDVIAIAGGYYHTIAMKSDGAVWTWGFNYYGQ 474
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 82/213 (38%), Gaps = 24/213 (11%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
IP ++ GG S GG +A G + WG D+EG L G P +
Sbjct: 285 IPVKV-GGLSDVIAIAGGNAHTIALKSDGTVWAWG--DNEGGQ-LGDGSTTNRSTPVKVS 340
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
A V+ A G++H + + G V+TWG E G ST +S P
Sbjct: 341 GLADVIAIAGGYSHTIVLRSDGTVWTWGHNE-------------GGQLGDGSTTNRST-P 386
Query: 162 TEQAPPSDKRA------GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
+ + +D A VK T A + GD S V +N +
Sbjct: 387 VQVSGLADVIAIAGGVYHTIAVKSDGTMWAWGYNWYGQLGDGTTINSSTPVQVNGLTDVI 446
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
+A G HT+ + G VW WG+ GQLG GS
Sbjct: 447 AIAGGYYHTIAMKSDGAVWTWGFNYYGQLGDGS 479
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 85/214 (39%), Gaps = 24/214 (11%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + WGS + GQ L G P P+ +++ A G+ H +
Sbjct: 1096 GGDYHTIALKSDNTVWAWGS-NSYGQ--LGDGTITNRSIPTPVTYLTNIIAIAGGYVHTI 1152
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD--KRAGEE 175
++ G V+ WG+ +G G D + + P + + +D AGE
Sbjct: 1153 ALKSDGTVWAWGYNG----------YGQLG----DGSTTNRSTPVQVSGLTDVIAIAGEY 1198
Query: 176 V----VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
V +K T A + GD T V ++ + +A G HT+ L G
Sbjct: 1199 VHTVALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIAIAGGYVHTIALKSDG 1258
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
VW WG+ GQLG G+ I + TP + L A
Sbjct: 1259 TVWTWGWNNSGQLGDGTTINRL-TPVQVSGLTDA 1291
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 70/198 (35%), Gaps = 31/198 (15%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG ++A G + WG G L G + P + ++ A G+ H +
Sbjct: 748 GGYVHSIALKSDGTVWAWGY---NGYGQLGDGSTTDHLTPVQVSGLTDIIAIAGGYIHTI 804
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++ G V+ WG E G D T S+ P + + +D A V
Sbjct: 805 ALKSDGTVWAWGHNE--------------GGQLGDGTTTNSSTPVQVSGLTDVIA----V 846
Query: 178 KRRKTSSAREESENPA----------SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
R + +S+ GD T V + + +A G HT+ L
Sbjct: 847 TARLYHTIALKSDGTVWTWGRNIYGQLGDGSTTERSLPVQVIGLTDVIAIAGGYYHTIAL 906
Query: 228 SDMGQVWGWGYGGEGQLG 245
G VW WGY G QLG
Sbjct: 907 KSDGAVWAWGYNGNNQLG 924
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 66/187 (35%), Gaps = 29/187 (15%)
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
S L G ++ P + + A G H +++ G V+TWGW
Sbjct: 620 NSQLGDGSTTDSSTPVQVSGLTDAIAIAGGVYHTIALKSDGTVWTWGWNNS--------- 670
Query: 143 FGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF--- 199
G G D T + P + +D A T + + + G ++
Sbjct: 671 -GQLG----DGTTINRSTPVQVIGLTDVIAIAG--GDYHTIALKSDGTVWTWGFNYYGQL 723
Query: 200 -----TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
T V + I +A G H++ L G VW WGY G GQLG GS
Sbjct: 724 GGGATTNRSTPVQVKGLADIIAIAGGYVHSIALKSDGTVWAWGYNGYGQLGDGS-----T 778
Query: 255 TPHLIPC 261
T HL P
Sbjct: 779 TDHLTPV 785
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 90/234 (38%), Gaps = 25/234 (10%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
V+ WG+ G + + I P ++ G + GG +A G + TWG +
Sbjct: 662 VWTWGWNNSGQLGDGTTINRSTPVQVIGLTDVIAIAGGDY-HTIALKSDGTVWTWG-FNY 719
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
GQ L G P + A ++ A G+ H +++ G V+ WG+
Sbjct: 720 YGQ--LGGGATTNRSTPVQVKGLADIIAIAGGYVHSIALKSDGTVWAWGYNG-------- 769
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSD--KRAGEEV----VKRRKTSSAREESENPAS 194
+G G D + P + + +D AG + +K T A +E
Sbjct: 770 --YGQLG----DGSTTDHLTPVQVSGLTDIIAIAGGYIHTIALKSDGTVWAWGHNEGGQL 823
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
GD T S V ++ + V A HT+ L G VW WG GQLG GS
Sbjct: 824 GDGTTTNSSTPVQVSGLTDVIAVTARLYHTIALKSDGTVWTWGRNIYGQLGDGS 877
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 51/131 (38%), Gaps = 23/131 (17%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS---RIKMVPTPHLIPCLEHAASGK 269
I +A G HT+ L G VW WGY G GQLG GS R V L + A
Sbjct: 1140 NIIAIAGGYVHTIALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIAIAGEYV 1199
Query: 270 DRPLLVRQGSV-----NSSGK---------------AGRSYVKEIACGGRHSAVVTDAGA 309
L G+V N G+ +G + V IA G H+ + G
Sbjct: 1200 HTVALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIAIAGGYVHTIALKSDGT 1259
Query: 310 LLTFGWGLYGQ 320
+ T+GW GQ
Sbjct: 1260 VWTWGWNNSGQ 1270
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 50/130 (38%), Gaps = 27/130 (20%)
Query: 191 NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
N GD T S V ++ +A G HT+ L G VW WG+ GQLG G+ I
Sbjct: 620 NSQLGDGSTTDSSTPVQVSGLTDAIAIAGGVYHTIALKSDGTVWTWGWNNSGQLGDGTTI 679
Query: 251 KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGAL 310
+ P+ V G + V IA G H+ + G +
Sbjct: 680 N-----------------RSTPVQV----------IGLTDVIAIAGGDYHTIALKSDGTV 712
Query: 311 LTFGWGLYGQ 320
T+G+ YGQ
Sbjct: 713 WTWGFNYYGQ 722
>gi|297797029|ref|XP_002866399.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297312234|gb|EFH42658.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 445
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 122/321 (38%), Gaps = 52/321 (16%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHG 92
++S L+ P R+ +S G CG F + G L WG D G+
Sbjct: 83 DQSFSLAQTPGRI-DAESSSFPIGISCGLFHSGLTIDGDLWIWGKGDG-GRLGFGQENSV 140
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW------------RECVPSAKVT 140
P PL E S+ A G H V++T G+V+TWG+ RE VP +
Sbjct: 141 FVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVP--RCV 198
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
++G +A TE +GE + R+ R +E
Sbjct: 199 DGSWDCKISAIATSGTHTAAITE--------SGELYMWGREEGDGRLGLGPGRGPNEGGG 250
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI---KMVPTPH 257
LS V + V+ GG T+ L+ GQ+W WG +LG G + + +P P
Sbjct: 251 LSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPLPVPS 310
Query: 258 L--IPCLEHAASGKDRPLLVRQGSVNS-----SGKAGRSYVKE----------------- 293
L + + A G L ++G V S G+ G S ++
Sbjct: 311 LDSVRITQIACGGYHSLALTKEGKVLSWGHGGHGQLGNSSLRNQKIPTEIEALADKKIVF 370
Query: 294 IACGGRHSAVVTDAGALLTFG 314
IACGG SA +TD G L +G
Sbjct: 371 IACGGSSSAAITDGGELWMWG 391
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 77/203 (37%), Gaps = 63/203 (31%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASV--VKAAAGW 113
CGG F +A ++ G+L WG+ + L G + EP P+P+ SV + A G
Sbjct: 269 CGGF--FTMALTKEGQLWNWGANSNY---ELGRGDNLGGWEPLPVPSLDSVRITQIACGG 323
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H +++T+ G+V +WG G G S Q +PTE +DK
Sbjct: 324 YHSLALTKEGKVLSWG-------------HGGHGQLGNSSLRNQK-IPTEIEALADK--- 366
Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
KI +A GG + ++D G++
Sbjct: 367 ---------------------------------------KIVFIACGGSSSAAITDGGEL 387
Query: 234 WGWGYGGEGQLGLGSRIKMVPTP 256
W WG + QLG+ ++ TP
Sbjct: 388 WMWGNAKDFQLGVPGLPEIQTTP 410
>gi|145593744|ref|YP_001158041.1| cell wall anchor domain-containing protein [Salinispora tropica
CNB-440]
gi|145303081|gb|ABP53663.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
Length = 577
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 91/259 (35%), Gaps = 50/259 (19%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
P+ L G D+ GGG +LA + +G L+ WG+ + GQ + TP L
Sbjct: 80 PVEVSLPAGTLLTDIAGGGK-HSLALTSTGSLLAWGN-NANGQLGDGTTTSSNTPVAVDL 137
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP---------SAKVTRDF-------- 143
P VV AAG H +++T G V WG S VT D
Sbjct: 138 PAGTEVVAIAAGNDHSLALTSTGAVLAWGDNSSGQLGDGTNDDRSTPVTVDLPTTSTTTA 197
Query: 144 ---GSAGSFQKDSTGKQSA--------LPTEQAPPSDK--------RAGEEVVKRRKTSS 184
GS S STG A L E ++K + S
Sbjct: 198 IAAGSVHSLSLTSTGSAFAWGNNDEGQLGDESTTSTNKPVNVALTTGTTLTAIAGGSAHS 257
Query: 185 AREESENPA------------SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
S+N A G L+P V L G +T +AAG H++ L G
Sbjct: 258 LGITSDNTAVAWGSNSQGQLGDGTNTNALAPVNVALTTGTTVTAIAAGLLHSVALLTNGT 317
Query: 233 VWGWGYGGEGQLGLGSRIK 251
WG GQLG G+ +
Sbjct: 318 AATWGNNATGQLGNGNNVT 336
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 53/130 (40%), Gaps = 31/130 (23%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P V+L G +T +A GG+H+L L+ G + WG GQLG G+
Sbjct: 80 PVEVSLPAGTLLTDIAGGGKHSLALTSTGSLLAWGNNANGQLGDGTTTS----------- 128
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQRM 322
+ P+ V AG V IA G HS +T GA+L +G GQ
Sbjct: 129 ------SNTPVAVDL-------PAGTEVVA-IAAGNDHSLALTSTGAVLAWGDNSSGQL- 173
Query: 323 AKCLAGDGIN 332
GDG N
Sbjct: 174 -----GDGTN 178
>gi|340501848|gb|EGR28585.1| regulator of chromosome condensation, putative [Ichthyophthirius
multifiliis]
Length = 612
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 90/221 (40%), Gaps = 28/221 (12%)
Query: 60 CGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP--LPTEASVVKAAAGWAH 115
CG+ ++A + +G ++ WG D S L G + +P +P +++ + G H
Sbjct: 181 CGYQHSVAITFNGNVLVWG---DNSSSQLGLGINSPNSIYYPVQIPNIQNIINVSCGSEH 237
Query: 116 CVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
+++ +VY+WG E S K+ F G S T
Sbjct: 238 TLALDNRNQVYSWGNGEGGLLGHSNEEIQASPKIIDKFQDLQVEFIICGGLHSLALT--- 294
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLN-PGVKITKVAAGGRHT 224
+ G R +++ + +F P + GV + ++AAG H+
Sbjct: 295 -----KKGHVYSWGRNEGGQLGLNQDVLKDNLYFCCLPEKICGQLEGVFVKQIAAGDAHS 349
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRI--KMVPTPHLIPCLE 263
L L+ GQV+GWGY GQLGLG + K V P I L+
Sbjct: 350 LALAQNGQVFGWGYNINGQLGLGQQQSDKQVSEPKQIKNLQ 390
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 102/265 (38%), Gaps = 41/265 (15%)
Query: 70 GKLITWGSADDEGQS------YLTSGKHGETPEPFP---LPTEASVV-KAAAGWAHCVSV 119
G L +WG + EGQ + KH + FP P + S++ + + G+ H V++
Sbjct: 131 GVLYSWGQ-NTEGQMGNVYDPKTNNPKHRKIKINFPKLVYPLKDSIIIQVSCGYQHSVAI 189
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV-- 177
T G V WG S+++ S +S +P Q + E +
Sbjct: 190 TFNGNVLVWGDNS---SSQLGLGINSP-----NSIYYPVQIPNIQNIINVSCGSEHTLAL 241
Query: 178 -KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
R + S E +E SP ++ +++ + GG H+L L+ G V+
Sbjct: 242 DNRNQVYSWGNGEGGLLGHSNEEIQASPKIIDKFQDLQVEFIICGGLHSLALTKKGHVYS 301
Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
WG GQLGL + + CL G+ + +VK+IA
Sbjct: 302 WGRNEGGQLGLNQDV--LKDNLYFCCLPEKICGQLEGV----------------FVKQIA 343
Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQ 320
G HS + G + +G+ + GQ
Sbjct: 344 AGDAHSLALAQNGQVFGWGYNINGQ 368
>gi|134025900|gb|AAI34575.1| RPGR protein [Bos taurus]
Length = 620
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 27/115 (23%)
Query: 208 LNPGV--KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
L PG+ K+ +VA GG HT++L++ V+ +G G GQLGLG+ P +I
Sbjct: 232 LVPGISEKVIQVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFTFETSEPKVI------ 284
Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
S KD+ + + CG H+A++T++G L TFG G +G+
Sbjct: 285 ESVKDKK------------------ISHVCCGENHTALITESGLLYTFGDGRHGK 321
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 65/148 (43%), Gaps = 35/148 (23%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
C+ L P K+ VA G HTLIL+ GQV+ G EGQLGLG I +
Sbjct: 125 CIKALKPE-KVKFVACGRNHTLILTGGGQVYATGGNNEGQLGLGDTDERSAFHLISFFTS 183
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNS-----SGKAG------------------RSYVK 292
H I L +A L +G + + SGK G V
Sbjct: 184 QHKIKQL--SAGSNTSAALTAEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISEKVI 241
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQ 320
++ACGG H+ V+T+ A+ TFG G +GQ
Sbjct: 242 QVACGGGHTVVLTEK-AVYTFGLGQFGQ 268
>gi|444917133|ref|ZP_21237237.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444711259|gb|ELW52206.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 1081
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 115/305 (37%), Gaps = 37/305 (12%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE-PFP 99
P PA++ G ++ G +LA G + TWG D L +G P P
Sbjct: 491 PSPAQVPGVAGATEIAAG-TYHSLALRSDGTVWTWG---DNSYGQLGAGATPRGPRAPAV 546
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
+P A + AAG H +++ +G+V+ WG V G + ++ G+ S
Sbjct: 547 VPGLAVITHVAAGLFHSLALDSSGQVWAWG-------DNVYGQLGDGSTTSRNVPGRVSG 599
Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
LP + + + E+ N GD T P ++ + ++
Sbjct: 600 LPAGIQAIVAGPSYSVALGADGSVWTWGENSNGQLGDGTTTARPVPARVSLPATLVALST 659
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVR 276
G HT+ L G +W WG GQLG G+ + TP +P ASG +R
Sbjct: 660 RGSHTVALDTTGMLWAWGRNVSGQLGNGTLVSE-STPRRVPSFARVQGFASGLRTTFALR 718
Query: 277 -QGSV-----NSSGKAGRSYVKE---------------IACGGRHSAVVTDAGALLTFGW 315
G+V NS G+ G +A G +H V+ G++ +FG
Sbjct: 719 ADGTVWAWGDNSLGQLGNGATSASPVPVQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGS 778
Query: 316 GLYGQ 320
GQ
Sbjct: 779 NSRGQ 783
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 111/288 (38%), Gaps = 53/288 (18%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F+LA S G + WG D G L G P +P A VV AAG H ++
Sbjct: 810 GALFSLALSCDGGVWAWG---DNGSGQLGDGAVTARTAPARVPGLAHVVAIAAGSDHALA 866
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ-KDSTGKQSALPTEQAPPSDKRA----- 172
V G V+ WG + GS Q D T A+P + D A
Sbjct: 867 VRADGTVWAWG---------------ANGSGQLGDGTTTSRAVPMQVKELVDVVAVAGGS 911
Query: 173 GEEVVKRRKTSS---AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
G + R + S G P V+ GV+ +A+G +H+L L++
Sbjct: 912 GHSLAVRADGTVWAWGANGSGQLGDGTTTSRTLPVFVSTLSGVQ--AIASGAQHSLALAE 969
Query: 230 MGQVWGWGYGGEGQLGLG---SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV-----N 281
G VW WG G GQLG G SR + V L ++ +G L + G V N
Sbjct: 970 GGVVWAWGANGSGQLGDGTTTSRTRPVQVSGL-SGVQGLVAGASFSLALTPGKVWSWGNN 1028
Query: 282 SSGKAGRSYVKE---------------IACGGRHSAVVTDAGALLTFG 314
S+G+ G + ++ G +H+ V+ + L++G
Sbjct: 1029 SAGQLGDGTLNSRSQPGAGPTLSSFVALSAGAQHTVVLRSDDSFLSWG 1076
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 123/341 (36%), Gaps = 53/341 (15%)
Query: 11 NEKMEECKETVVYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSES 69
N + V+ WG G E S + P ++ G V G ++A E
Sbjct: 58 NHSLYVTPAGTVWAWGANAQGQLGEGSTLQHSTPTQVVGLTGVTAVAAGNT-HSMALREE 116
Query: 70 GKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS----VVKAAAGWAHCVSVTEAGEV 125
G + TWG+ D G+ G+ +P + + V AAG H +++ G V
Sbjct: 117 GTVWTWGTNTD--------GQLGDGVSQRSVPAQVAGLTGVTAIAAGNLHSLALIN-GAV 167
Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA 185
+ WG T G S + + K + L TE + +KR T A
Sbjct: 168 WAWG-------NNTTGQLGDGSSTSRSTPAKVAGL-TEVVAIAAGDFHSLALKRDGTVWA 219
Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM---GQVWGWGYGGEG 242
+ + GD V ++ I +A GG H++ S G+VW WG G
Sbjct: 220 WGGNYSGQLGDGTLDSRSTPVRVSGLTGIVALAGGGSHSVAASSTTLGGKVWAWGDNTYG 279
Query: 243 QLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVR------------QGSVNSSGK-- 285
QLG G + + P +P L ASG L +R Q +G
Sbjct: 280 QLGNGGDVSSL-LPLEVPGLTQVVALASGTSHSLALRGDDSVWAWGDNAQAQTAQTGTSV 338
Query: 286 -------AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
+G S + +ACG S V G +T GWG G
Sbjct: 339 QRVPVRVSGVSDAQALACGNAFSLV--GRGDNVTLGWGANG 377
Score = 44.3 bits (103), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 84/229 (36%), Gaps = 63/229 (27%)
Query: 22 VYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
V+ WG G + + + P P RL + +LA G + WG +
Sbjct: 420 VWAWGDNTYGQLGDGTLVSRPAPVRLSSTLTSVRALSASSYHSLALRSDGTVWAWGD-NA 478
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
GQ TSG G P P +P A + AAG H +++ G V+TWG
Sbjct: 479 YGQLGDTSG--GRRPSPAQVPGVAGATEIAAGTYHSLALRSDGTVWTWG----------- 525
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
+S G+ A T + P RA
Sbjct: 526 ----------DNSYGQLGAGATPRGP----RA---------------------------- 543
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
P +V PG+ IT VAAG H+L L GQVW WG GQLG GS
Sbjct: 544 --PAVV---PGLAVITHVAAGLFHSLALDSSGQVWAWGDNVYGQLGDGS 587
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 21/128 (16%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL-IPCLEHAASGKDRP 272
+T VAAG H++ L + G VW WG +GQLG G + VP + + A+G
Sbjct: 100 VTAVAAGNTHSMALREEGTVWTWGTNTDGQLGDGVSQRSVPAQVAGLTGVTAIAAGNLHS 159
Query: 273 LLVRQGSV-----NSSGK---------------AGRSYVKEIACGGRHSAVVTDAGALLT 312
L + G+V N++G+ AG + V IA G HS + G +
Sbjct: 160 LALINGAVWAWGNNTTGQLGDGSSTSRSTPAKVAGLTEVVAIAAGDFHSLALKRDGTVWA 219
Query: 313 FGWGLYGQ 320
+G GQ
Sbjct: 220 WGGNYSGQ 227
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 128/349 (36%), Gaps = 76/349 (21%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSES--GKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
P R+ G + GGG A+S + GK+ WG D L +G + P +
Sbjct: 239 PVRVSGLTGIVALAGGGSHSVAASSTTLGGKVWAWG---DNTYGQLGNGGDVSSLLPLEV 295
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK---------------------- 138
P VV A+G +H +++ V+ WG +A+
Sbjct: 296 PGLTQVVALASGTSHSLALRGDDSVWAWGDNAQAQTAQTGTSVQRVPVRVSGVSDAQALA 355
Query: 139 -------------VTRDFGSAGSFQKDSTGKQSA------LPTEQAPPSDKRAGEEVVKR 179
VT +G+ GS Q + G S +P+ A S V R
Sbjct: 356 CGNAFSLVGRGDNVTLGWGANGSGQLGN-GSSSVRALPGRVPSLTAGASLAAGDHHVFLR 414
Query: 180 RKTSSAREESENPAS--GDEFFTLSPCLVTLNPGV-KITKVAAGGRHTLILSDMGQVWGW 236
+ S +N GD P V L+ + + ++A H+L L G VW W
Sbjct: 415 QADGSVWAWGDNTYGQLGDGTLVSRPAPVRLSSTLTSVRALSASSYHSLALRSDGTVWAW 474
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVR-QGSV-----NSSGKAG 287
G GQLG S + P+P +P + A A+G L +R G+V NS G+ G
Sbjct: 475 GDNAYGQLGDTSGGRR-PSPAQVPGVAGATEIAAGTYHSLALRSDGTVWTWGDNSYGQLG 533
Query: 288 R----------------SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ + +A G HS + +G + +G +YGQ
Sbjct: 534 AGATPRGPRAPAVVPGLAVITHVAAGLFHSLALDSSGQVWAWGDNVYGQ 582
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 125/325 (38%), Gaps = 51/325 (15%)
Query: 22 VYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
V+ WG + G + S +P R+ G + G +++A G + TWG +
Sbjct: 572 VWAWGDNVYGQLGDGSTTSRNVPGRVSGLPAGIQAIVAGPSYSVALGADGSVWTWGE-NS 630
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
GQ L G P P + A++V + +H V++ G ++ WG V+
Sbjct: 631 NGQ--LGDGTTTARPVPARVSLPATLVALSTRGSHTVALDTTGMLWAWG-------RNVS 681
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF- 199
G+ G+ +ST ++ PS R R T + R + A GD
Sbjct: 682 GQLGN-GTLVSESTPRRV--------PSFARVQGFASGLRTTFALRADGTVWAWGDNSLG 732
Query: 200 -------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL-GSRIK 251
+ SP V + +A+G +H L +S G V+ +G GQLG GS +
Sbjct: 733 QLGNGATSASPVPVQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSRGQLGYEGSATQ 792
Query: 252 MVPTPHLIP-CLEHAASGKDRPLLVR-QGSV-----NSSGKAGR---------------S 289
P P C+E A+G L + G V N SG+ G +
Sbjct: 793 TSPRWLTGPECIEAVAAGALFSLALSCDGGVWAWGDNGSGQLGDGAVTARTAPARVPGLA 852
Query: 290 YVKEIACGGRHSAVVTDAGALLTFG 314
+V IA G H+ V G + +G
Sbjct: 853 HVVAIAAGSDHALAVRADGTVWAWG 877
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 23/127 (18%)
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHL-IPCLEHAASGKDRPL 273
++AAG H+L ++ G VW WG +GQLG GS ++ PT + + + A+G +
Sbjct: 52 RLAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQHSTPTQVVGLTGVTAVAAGNTHSM 111
Query: 274 LVR-QGSV-----NSSGK--------------AGRSYVKEIACGGRHSAVVTDAGALLTF 313
+R +G+V N+ G+ AG + V IA G HS + + GA+ +
Sbjct: 112 ALREEGTVWTWGTNTDGQLGDGVSQRSVPAQVAGLTGVTAIAAGNLHSLALIN-GAVWAW 170
Query: 314 GWGLYGQ 320
G GQ
Sbjct: 171 GNNTTGQ 177
>gi|390479661|ref|XP_002762827.2| PREDICTED: LOW QUALITY PROTEIN: X-linked retinitis pigmentosa
GTPase regulator, partial [Callithrix jacchus]
Length = 817
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 25/108 (23%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
K+ +VA GG H+++L++ V+ +G G GQLGLG+ + P ++ +
Sbjct: 244 KVIQVACGGEHSVVLTE-DAVYTFGLGQFGQLGLGTLLFETSEPKVVENI---------- 292
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G + I+CG H+A++TD G + TFG G +G+
Sbjct: 293 --------------GNKTISYISCGENHAALLTDNGLMYTFGDGRHGK 326
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 57/145 (39%), Gaps = 31/145 (21%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--------RIKMVPT 255
C+ L P K+ A G HTL+ ++ G V+ G EGQLGLG R+ +
Sbjct: 80 CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTTFHRVSFFTS 138
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
H I L +A L G + NS G+ G + I+
Sbjct: 139 QHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLPNILNACVPHQVTIGKPVSWIS 196
Query: 296 CGGRHSAVVTDAGALLTFGWGLYGQ 320
CG HSA VT G L FG G+
Sbjct: 197 CGYYHSAFVTTDGELYIFGESENGK 221
>gi|384939244|gb|AFI33227.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
mulatta]
Length = 1020
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 105/270 (38%), Gaps = 83/270 (30%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEASVVKAA 110
D+ G +LA G++ WG A EGQ L G+ E TP+ +++ +
Sbjct: 78 DLVSCGKEHSLAVCHKGRVFAWG-AGSEGQ--LGIGEFKEISFTPKKITTLNGIKIIQVS 134
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G H +++++ +V++WG G G GK+ +P+ QA P
Sbjct: 135 CGHYHSLALSKDSQVFSWG----------KNSHGQLG------LGKE--VPS-QASPQRV 175
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
R+ E G+ + +VAAGG H+ LS
Sbjct: 176 RSLE------------------------------------GIPLAQVAAGGAHSFALSLC 199
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
G +GWG GQL L R VP ++PL + G++ + G
Sbjct: 200 GTSFGWGSNSAGQLALSGR--NVPV------------QSNKPLSI--GALKNLG------ 237
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V I+CG H+AV+ G + TFG GQ
Sbjct: 238 VIYISCGDEHTAVLIQDGKVFTFGDNSSGQ 267
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 61/141 (43%), Gaps = 35/141 (24%)
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE- 263
L TLN + V+ G H+L + G+V+ WG G EGQLG+G ++ TP I L
Sbjct: 72 LETLN----VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNG 127
Query: 264 ----HAASGKDRPLLVRQGSV------NSSGKAG--------------RSY----VKEIA 295
+ G L + + S NS G+ G RS + ++A
Sbjct: 128 IKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVA 187
Query: 296 CGGRHSAVVTDAGALLTFGWG 316
GG HS ++ G +FGWG
Sbjct: 188 AGGAHSFALSLCGT--SFGWG 206
>gi|449268693|gb|EMC79542.1| X-linked retinitis pigmentosa GTPase regulator, partial [Columba
livia]
Length = 719
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 27/113 (23%)
Query: 210 PGV--KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
PG+ K+ KVA GG HT++L++ V+ +G G GQLG G+ I P + L
Sbjct: 234 PGIMEKVNKVACGGEHTVVLTET-DVYTFGLGQYGQLGHGTFIFETSVPKSVKHLR---- 288
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
R + I CG H+AVV + G + TFG G +G+
Sbjct: 289 --------------------RHKICNITCGENHTAVVAENGLMFTFGDGRHGK 321
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 61/138 (44%), Gaps = 29/138 (21%)
Query: 204 CLVTLNPGVKITKVAAGGR-HTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVP 254
C+ L P + TK+A GR HTL+ ++ G V+ G EGQLGLG I
Sbjct: 75 CVKALKP--EKTKLAVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERSTFHLISFFT 132
Query: 255 TPHLIPCL-----EHAASGKDRPLLV----RQGSVNSSGKAGRSY---------VKEIAC 296
H I L AA +D L V +G + + +A S V I+C
Sbjct: 133 NQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADEACVSVPCQVDVGKPVSSISC 192
Query: 297 GGRHSAVVTDAGALLTFG 314
G HSA++T G L TFG
Sbjct: 193 GYYHSALITGDGELYTFG 210
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 30/133 (22%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASGKDR 271
++ G HT I++ G+++ +G GQLGLGS+ V P + L + A G++
Sbjct: 35 ISCGDEHTAIVTGNGKLYMFGSNNWGQLGLGSK-NTVSKPTCVKALKPEKTKLAVCGRNH 93
Query: 272 PLL-VRQGSV-----NSSGKAG------------------RSYVKEIACGGRHSAVVTDA 307
L+ +G+V NS G+ G + +K++A G SA VT+
Sbjct: 94 TLVYTEKGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTNQHKIKQLAAGSYTSAAVTED 153
Query: 308 GALLTFGWGLYGQ 320
G L +G GQ
Sbjct: 154 GQLFVWGDNSEGQ 166
>gi|355749434|gb|EHH53833.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca fascicularis]
Length = 1020
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 105/270 (38%), Gaps = 83/270 (30%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEASVVKAA 110
D+ G +LA G++ WG A EGQ L G+ E TP+ +++ +
Sbjct: 78 DLVSCGKEHSLAVCHKGRVFAWG-AGSEGQ--LGIGEFKEISFTPKKITTLNGIKIIQVS 134
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G H +++++ +V++WG G G GK+ +P+ QA P
Sbjct: 135 CGHYHSLALSKDSQVFSWG----------KNSHGQLG------LGKE--VPS-QASPQRV 175
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
R+ E G+ + +VAAGG H+ LS
Sbjct: 176 RSLE------------------------------------GIPLAQVAAGGAHSFALSLC 199
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
G +GWG GQL L R VP ++PL + G++ + G
Sbjct: 200 GTSFGWGSNSAGQLALSGR--NVPV------------QSNKPLSI--GALKNLG------ 237
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V I+CG H+AV+ G + TFG GQ
Sbjct: 238 VIYISCGDEHTAVLIQDGKVFTFGDNSSGQ 267
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 61/141 (43%), Gaps = 35/141 (24%)
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE- 263
L TLN + V+ G H+L + G+V+ WG G EGQLG+G ++ TP I L
Sbjct: 72 LETLN----VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNG 127
Query: 264 ----HAASGKDRPLLVRQGSV------NSSGKAG--------------RSY----VKEIA 295
+ G L + + S NS G+ G RS + ++A
Sbjct: 128 IKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVA 187
Query: 296 CGGRHSAVVTDAGALLTFGWG 316
GG HS ++ G +FGWG
Sbjct: 188 AGGAHSFALSLCGT--SFGWG 206
>gi|355569557|gb|EHH25458.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca mulatta]
Length = 1020
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 105/270 (38%), Gaps = 83/270 (30%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEASVVKAA 110
D+ G +LA G++ WG A EGQ L G+ E TP+ +++ +
Sbjct: 78 DLVSCGKEHSLAVCHKGRVFAWG-AGSEGQ--LGIGEFKEISFTPKKITTLNGIKIIQVS 134
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G H +++++ +V++WG G G GK+ +P+ QA P
Sbjct: 135 CGHYHSLALSKDSQVFSWG----------KNSHGQLG------LGKE--VPS-QASPQRV 175
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
R+ E G+ + +VAAGG H+ LS
Sbjct: 176 RSLE------------------------------------GIPLAQVAAGGAHSFALSLC 199
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
G +GWG GQL L R VP ++PL + G++ + G
Sbjct: 200 GTSFGWGSNSAGQLALSGR--NVPV------------QSNKPLSI--GALKNLG------ 237
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V I+CG H+AV+ G + TFG GQ
Sbjct: 238 VIYISCGDEHTAVLIQDGKVFTFGDNSSGQ 267
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 61/141 (43%), Gaps = 35/141 (24%)
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE- 263
L TLN + V+ G H+L + G+V+ WG G EGQLG+G ++ TP I L
Sbjct: 72 LETLN----VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNG 127
Query: 264 ----HAASGKDRPLLVRQGSV------NSSGKAG--------------RSY----VKEIA 295
+ G L + + S NS G+ G RS + ++A
Sbjct: 128 IKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVA 187
Query: 296 CGGRHSAVVTDAGALLTFGWG 316
GG HS ++ G +FGWG
Sbjct: 188 AGGAHSFALSLCGT--SFGWG 206
>gi|21619468|gb|AAH31624.1| RPGR protein [Homo sapiens]
gi|119579847|gb|EAW59443.1| retinitis pigmentosa GTPase regulator, isoform CRA_c [Homo sapiens]
gi|325464495|gb|ADZ16018.1| retinitis pigmentosa GTPase regulator [synthetic construct]
Length = 480
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 26/119 (21%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P LV+ P K+ +VA GG HT++L++ V+ +G G GQLGLG+ + P +I
Sbjct: 234 TPQLVSEIPE-KVIQVACGGEHTVVLTE-NAVYTFGLGQFGQLGLGTFLFETSEPKVIEN 291
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ +D+ + SY I+CG H+A++TD G + TFG G +G+
Sbjct: 292 I------RDQTI---------------SY---ISCGENHTALITDIGLMYTFGDGRHGK 326
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 54/139 (38%), Gaps = 31/139 (22%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
C+ L P K+ A G HTL+ ++ G V+ G EGQLGLG I +
Sbjct: 80 CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
H I L +A L G + NS G+ G V I+
Sbjct: 139 EHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWIS 196
Query: 296 CGGRHSAVVTDAGALLTFG 314
CG HSA VT G L FG
Sbjct: 197 CGYYHSAFVTTDGELYVFG 215
>gi|195999218|ref|XP_002109477.1| hypothetical protein TRIADDRAFT_21647 [Trichoplax adhaerens]
gi|190587601|gb|EDV27643.1| hypothetical protein TRIADDRAFT_21647, partial [Trichoplax
adhaerens]
Length = 330
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 94/247 (38%), Gaps = 47/247 (19%)
Query: 91 HGETPE-PFPLPTEASV---VKAAAGWAHCVSVTEA--GEVYTWGWRE--CVPSAKVTRD 142
HGE + P P EA + +K A H V A G+VY+WG + + +
Sbjct: 14 HGEDIDIPSPRVVEALLAYNIKRLACGLHTVFALNAEDGKVYSWGLGKYGILGQGNLRSR 73
Query: 143 FG--SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS----GD 196
F SF+ + S A V T S +N S GD
Sbjct: 74 FAPLKIASFKSSNVIDISCHELHAAA---------VTSVTNTGSVYSFGDNSNSQLGVGD 124
Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
P LVT+ I KVA G H+ LS G ++ WG G +GQLGLG+ + P
Sbjct: 125 TEPYAEPQLVTVLNDENIIKVACGKYHSAALSAKGNLFLWGLGDDGQLGLGNY-NLSTEP 183
Query: 257 HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
++ E A V ++ACG H+ ++T G + FG
Sbjct: 184 TILHIGEKKAK-----------------------VMDVACGDLHTCILTVGGLVYAFGSN 220
Query: 317 LYGQRMA 323
+YGQ A
Sbjct: 221 IYGQIAA 227
>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
Length = 2335
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 58/120 (48%), Gaps = 27/120 (22%)
Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
P L+ V IT+V+ AGG+H L LS+ G+V+ WG G +G+LG G+R
Sbjct: 1483 PTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNR----------- 1531
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
S D P ++ G VK +A GG HSA + G L T+G G YG+
Sbjct: 1532 ------SSLDHPRIIE-------SLRGDLIVK-VATGGSHSAAINATGGLYTWGKGRYGR 1577
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 45 RLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPL 100
RL G D K CG F+LA S G + TWG D Y G +H P+
Sbjct: 670 RLSGQDVVKIECGAQ--FSLALSRCGLVWTWGKGD-----YFRLGHGSDQHVRRPQVVEG 722
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
E VV A G HC++VTE G+V+ WG
Sbjct: 723 LREHKVVDVAVGALHCLAVTEGGQVFAWG 751
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 28/137 (20%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG------SRIKMVPTPHLIPCLEHA 265
+K+T+V G + ++ G+V+ G G+LGLG SR+ V P I L
Sbjct: 463 LKVTQVIGGSKSLFAVTMGGKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVH 522
Query: 266 ASGKDRPLLVRQGSVNS-----SGKAGR-----------------SYVKEIACGGRHSAV 303
+ G+ L G V S GK G +++I+CG HSA
Sbjct: 523 SGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAA 582
Query: 304 VTDAGALLTFGWGLYGQ 320
+ +G L T+G G+YG+
Sbjct: 583 IGSSGTLYTWGHGMYGR 599
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K + CG F+LA S++G + TWG D + S +H P+ VV+ +
Sbjct: 1656 KHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGH-GSDEHVRRPKLIESLRGMKVVEVS 1714
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G HC++ + G+VYTWG
Sbjct: 1715 VGSLHCIAAVDNGDVYTWG 1733
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L+ G+K+ +V+ G H + D G V+ WG EGQ+G G+ + P L+ L
Sbjct: 1699 PKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGT-TQATQIPRLVAAL 1757
Query: 263 E 263
+
Sbjct: 1758 Q 1758
>gi|118351057|ref|XP_001008807.1| Kinesin motor domain containing protein [Tetrahymena thermophila]
gi|89290574|gb|EAR88562.1| Kinesin motor domain containing protein [Tetrahymena thermophila
SB210]
Length = 1264
Score = 55.5 bits (132), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 54/124 (43%), Gaps = 25/124 (20%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P V + I V G +HTL LS+ G+V+ WG+G +GQLGLG + +P I
Sbjct: 931 LLPTPVNFFSKMSIVSVGCGWQHTLALSNDGRVFSWGFGEDGQLGLGD-YQSQNSPQFIN 989
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
LE +V +I G HS+V+T G + FG + +
Sbjct: 990 SLEG------------------------YFVTQINAGHSHSSVITSEGIFMMFGCNIDHR 1025
Query: 321 RMAK 324
M K
Sbjct: 1026 LMNK 1029
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 55/243 (22%), Positives = 97/243 (39%), Gaps = 35/243 (14%)
Query: 21 VVYMWGY-------LPGTSPEKSPILSP-IPARLCGGDSWKDVCGGGCGF--ALATSESG 70
++Y+WG + G P K P + P I A C G+ + S G
Sbjct: 861 IIYIWGNGKDGRLGIEGEKPFKFPQIIPNIQA-----------CQVSLGYHHSACISNQG 909
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+++TWG + GQ +S ++ P P ++ S+V GW H ++++ G V++WG+
Sbjct: 910 QILTWGRGN-RGQLGHSSFENCLLPTPVNFFSKMSIVSVGCGWQHTLALSNDGRVFSWGF 968
Query: 131 RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA-GEEVVKRRKTSSAREES 189
E D+ S S Q ++ + + A S E + +
Sbjct: 969 GE--DGQLGLGDYQSQNSPQFINSLEGYFVTQINAGHSHSSVITSEGIFMMFGCNIDHRL 1026
Query: 190 ENPASGDEFFTLSPCLVTLN-------PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
N + ++F PC+ L K + G H+ +++ G ++ G G EG
Sbjct: 1027 MNKTNQNQFL---PCITELEFLRQEYGSDYNAVKASLGVNHSAVITKNGNLYTSGLGNEG 1083
Query: 243 QLG 245
QLG
Sbjct: 1084 QLG 1086
Score = 45.1 bits (105), Expect = 0.049, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 27/112 (24%)
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-MVPTPHLIPCLEHAASG 268
P ++ +V+ G H+ +S+ GQ+ WG G GQLG S ++PTP
Sbjct: 888 PNIQACQVSLGYHHSACISNQGQILTWGRGNRGQLGHSSFENCLLPTP------------ 935
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
VN K + + CG +H+ +++ G + ++G+G GQ
Sbjct: 936 -----------VNFFSKMS---IVSVGCGWQHTLALSNDGRVFSWGFGEDGQ 973
Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
P L+ KIT V+ G RH + +++ G+V+ WG+ QLGLG K P
Sbjct: 1185 PKLIESLKNFKITSVSTGCRHAVAITNDGKVYTWGFNFYDQLGLGDSEKDYQQP 1238
>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 2334
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 58/120 (48%), Gaps = 27/120 (22%)
Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
P L+ V IT+V+ AGG+H L LS+ G+V+ WG G +G+LG G+R
Sbjct: 1482 PTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNR----------- 1530
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
S D P ++ G VK +A GG HSA + G L T+G G YG+
Sbjct: 1531 ------SSLDHPRIIE-------SLRGDLIVK-VATGGSHSAAINATGGLYTWGKGRYGR 1576
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 45 RLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPL 100
RL G D K CG F+LA S G + TWG D Y G +H P+
Sbjct: 669 RLSGQDVVKIECGAQ--FSLALSRCGLVWTWGKGD-----YFRLGHGSDQHVRRPQVVEG 721
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
E VV A G HC++VTE G+V+ WG
Sbjct: 722 LREHKVVDVAVGALHCLAVTEGGQVFAWG 750
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 28/137 (20%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG------SRIKMVPTPHLIPCLEHA 265
+K+T+V G + ++ G+V+ G G+LGLG SR+ V P I L
Sbjct: 462 LKVTQVIGGSKSLFAVTMGGKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVH 521
Query: 266 ASGKDRPLLVRQGSVNS-----SGKAGR-----------------SYVKEIACGGRHSAV 303
+ G+ L G V S GK G +++I+CG HSA
Sbjct: 522 SGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAA 581
Query: 304 VTDAGALLTFGWGLYGQ 320
+ +G L T+G G+YG+
Sbjct: 582 IGSSGTLYTWGHGMYGR 598
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K + CG F+LA S++G + TWG D + S +H P+ VV+ +
Sbjct: 1655 KHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGH-GSDEHVRRPKLIESLRGMKVVEVS 1713
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G HC++ + G+VYTWG
Sbjct: 1714 VGSLHCIAAVDNGDVYTWG 1732
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L+ G+K+ +V+ G H + D G V+ WG EGQ+G G+ + P L+ L
Sbjct: 1698 PKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGT-TQATQIPRLVAAL 1756
Query: 263 E 263
+
Sbjct: 1757 Q 1757
>gi|356497843|ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 388
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 98/257 (38%), Gaps = 32/257 (12%)
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
+WG A EGQ + P+ P+ +S+ A G AH +++T AG+V +WG
Sbjct: 22 SWG-AGTEGQLGTKILQDEHFPQLLHQPSLSSISSLACGGAHVIALTSAGKVLSWGRGN- 79
Query: 134 VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA 193
S ++ + S + +G +
Sbjct: 80 --SGQLGHGLVVSNSLYPKAVTSLDGYFITHVSAGWGHSGFVSDNGCVFTCGDGSFGQLG 137
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKM 252
GD SP V+ + +VA G RH+L+L QV+G+G G GQLG+ + R+K
Sbjct: 138 HGDHASHCSPVKVSCFVDQHVEQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDRVKS 197
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLT 312
V P ++ E + IA G HSA V+ G + T
Sbjct: 198 VNVPKVVSGFEGVE------------------------IAGIAANGDHSAAVSVDGHVYT 233
Query: 313 FGWGLYG---QRMAKCL 326
+G G G R+ +CL
Sbjct: 234 WGRGFKGFEDARVPQCL 250
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 144/376 (38%), Gaps = 88/376 (23%)
Query: 3 MNGSKREENEKMEECKETVVYMWGYLPGTSPE---------------KSPILSPIPARLC 47
M K+ ENE ++ E V+ WG GT + P LS I + C
Sbjct: 1 MEEPKKTENEDDKDESEQRVWSWG--AGTEGQLGTKILQDEHFPQLLHQPSLSSISSLAC 58
Query: 48 GGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVV 107
GG +A + +GK+++WG + + + P+ +
Sbjct: 59 GG-----------AHVIALTSAGKVLSWGRGNSGQLGHGLVVSNSLYPKAVTSLDGYFIT 107
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL--PTEQA 165
+AGW H V++ G V+T G GSF + G ++ P + +
Sbjct: 108 HVSAGWGHSGFVSDNGCVFTCG----------------DGSFGQLGHGDHASHCSPVKVS 151
Query: 166 PPSDKRAGEEVVKRRKT-----------SSAREESENPASGDEFFTLS-PCLVTLNPGVK 213
D+ + R + + + + S D +++ P +V+ GV+
Sbjct: 152 CFVDQHVEQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDRVKSVNVPKVVSGFEGVE 211
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEG-----------------QLGLG--------- 247
I +AA G H+ +S G V+ WG G +G ++ LG
Sbjct: 212 IAGIAANGDHSAAVSVDGHVYTWGRGFKGFEDARVPQCLNSSLNFTKVALGWNHALAMSG 271
Query: 248 -SRIKMVPTPHL--IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
+ M+ HL + L++ + K P L R+ ++ + + +IA G HS +V
Sbjct: 272 EGEVCMLGGNHLGVLSDLQNISPAKHLPHL-REVNLEKVPGLDGTKITDIATGAEHSVIV 330
Query: 305 TDAGALLTFGWGLYGQ 320
T+ G + T+GWG +GQ
Sbjct: 331 TEHGEIKTWGWGEHGQ 346
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 6/152 (3%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGW-RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ 164
+ AA H +V+ G VYTWG + A+V + S+ +F K + G AL
Sbjct: 212 IAGIAANGDHSAAVSVDGHVYTWGRGFKGFEDARVPQCLNSSLNFTKVALGWNHALAMSG 271
Query: 165 APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
G + + P + P L G KIT +A G H+
Sbjct: 272 EGEVCMLGGNHLGVLSDLQNISPAKHLPHLREVNLEKVPGL----DGTKITDIATGAEHS 327
Query: 225 LILSDMGQVWGWGYGGEGQLGLG-SRIKMVPT 255
+I+++ G++ WG+G GQLGLG +R ++ P
Sbjct: 328 VIVTEHGEIKTWGWGEHGQLGLGDTRDRISPV 359
>gi|67617767|ref|XP_667559.1| hect domain and RLD 2 [Cryptosporidium hominis TU502]
gi|54658712|gb|EAL37335.1| hect domain and RLD 2 [Cryptosporidium hominis]
Length = 1878
Score = 55.5 bits (132), Expect = 4e-05, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 30/171 (17%)
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
R T E +N + + ++T PC+V KI++++ G H+L LSD G V+ WG
Sbjct: 134 RGHTEFGNEHDKNDLN-ESWYTPIPCIVNFPFNAKISRISCGANHSLALSDSGLVFAWGI 192
Query: 239 GGEGQLGLG------SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAG 287
G G LG G S +K+ P L AA + G V NS+G+ G
Sbjct: 193 GQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGARHSLCCNEDGQVFAWGSNSNGRLG 252
Query: 288 ------------------RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ ++ +A G HS + G + T+G G G+
Sbjct: 253 TGGSYGMKTVPTQIKSLSQYHITLVAAGESHSGCIDSFGYIYTWGNGGSGK 303
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 47/195 (24%), Positives = 71/195 (36%), Gaps = 63/195 (32%)
Query: 59 GCGFALATSESGKLITWGSADDEGQ-SYLTSGKHGETPEPFPL---PTEASVVKAAAGWA 114
G +LA S+SG + WG GQ L +G+ + P + PT+ V+ AAG
Sbjct: 174 GANHSLALSDSGLVFAWGI----GQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGAR 229
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H + E G+V+ WG + G+ GS+ +PT+ S
Sbjct: 230 HSLCCNEDGQVFAWG-------SNSNGRLGTGGSY------GMKTVPTQIKSLSQ----- 271
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
IT VAAG H+ + G ++
Sbjct: 272 -------------------------------------YHITLVAAGESHSGCIDSFGYIY 294
Query: 235 GWGYGGEGQLGLGSR 249
WG GG G+LG G++
Sbjct: 295 TWGNGGSGKLGHGTQ 309
Score = 42.4 bits (98), Expect = 0.30, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-SVVKAAAGWAHCV 117
G LA + SG+LITWG A G+ S K P P + +V A G H +
Sbjct: 673 GSSHTLALTASGELITWG-AGYYGRLGTNSTKSHSNPIKIRFPIKGVQIVDIAVGSYHSM 731
Query: 118 SVTEAGEVYTWGWRECVPSAK 138
+V+ G+++ WG E V S K
Sbjct: 732 AVSSLGDLWVWGKAENVLSEK 752
Score = 39.7 bits (91), Expect = 1.9, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 45/111 (40%), Gaps = 16/111 (14%)
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
P + ++A G HTL+L G ++ WG GQLG+ +R + + K
Sbjct: 486 PSWSVRQIACGTSHTLLLVYGGTIFAWGDNKYGQLGIDTRRR-----------KSQDGDK 534
Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ L + S ++ +ACG HS G ++G G GQ
Sbjct: 535 NESFLNEPTEIKFS-----EPIRRVACGSWHSLCCDIKGNCFSWGRGDRGQ 580
Score = 39.7 bits (91), Expect = 2.2, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
LN G I KVA G HTL L+ G++ WG G G+LG S
Sbjct: 661 LNLGTPIIKVALGSSHTLALTASGELITWGAGYYGRLGTNS 701
>gi|387540886|gb|AFJ71070.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
mulatta]
Length = 1020
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 105/270 (38%), Gaps = 83/270 (30%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEASVVKAA 110
D+ G +LA G++ WG A EGQ L G+ E TP+ +++ +
Sbjct: 78 DLVSCGKEHSLAVCHKGRVFAWG-AGSEGQ--LGIGEFKEISFTPKKITTLNGIKIIQVS 134
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G H +++++ +V++WG G G GK+ +P+ QA P
Sbjct: 135 CGHYHSLALSKDSQVFSWG----------KNSHGQLG------LGKE--VPS-QASPQRV 175
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
R+ E G+ + +VAAGG H+ LS
Sbjct: 176 RSLE------------------------------------GIPLAQVAAGGAHSFALSLC 199
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
G +GWG GQL L R VP ++PL + G++ + G
Sbjct: 200 GTSFGWGSNSAGQLALSGR--NVPV------------QSNKPLSI--GALKNLG------ 237
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V I+CG H+AV+ G + TFG GQ
Sbjct: 238 VIYISCGDEHTAVLIQDGKVFTFGDNSSGQ 267
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 61/141 (43%), Gaps = 35/141 (24%)
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE- 263
L TLN + V+ G H+L + G+V+ WG G EGQLG+G ++ TP I L
Sbjct: 72 LETLN----VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNG 127
Query: 264 ----HAASGKDRPLLVRQGSV------NSSGKAG--------------RSY----VKEIA 295
+ G L + + S NS G+ G RS + ++A
Sbjct: 128 IKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVA 187
Query: 296 CGGRHSAVVTDAGALLTFGWG 316
GG HS ++ G +FGWG
Sbjct: 188 AGGAHSFALSLCGT--SFGWG 206
>gi|449453906|ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
sativus]
Length = 481
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 127/331 (38%), Gaps = 79/331 (23%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPF 98
SP+P + K + GG L +ESG++ G ++ GQ ++ K T P
Sbjct: 120 SPVPCSSFDREMLKGIACGGA-HTLFLTESGRVYATG-LNNFGQLGISDEKRFSTEPVEV 177
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS 158
+P EA + +AG+ H VT GE+Y WG S + GK+S
Sbjct: 178 RIPKEA--MHISAGYNHSCVVTADGELYMWG----------------VNSNGQLGLGKKS 219
Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT------------------ 200
A D G V+KR S + S A G E F+
Sbjct: 220 AKAVHLPTKVDSLDG-IVIKRAALGS--DHSIAVADGGEVFSWGDGRSGRLGHGHESTFL 276
Query: 201 --------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+P L+ G+K+ VAAG H+ + + G V+ +G ++ G K
Sbjct: 277 GFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIFGERATNRVSFGEANK- 335
Query: 253 VPTPHLIP----CLEHAASGKDRPLLVRQGSVNS-----------------------SGK 285
TP LI C E A G +L + G + S G
Sbjct: 336 ATTPSLISTLLDCEEVACGGYHTCVLTKGGDLYSWGSNENGCLGNGSTSVSHLPERVEGP 395
Query: 286 AGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
+S V +++CG +H+A ++ GA+ T+GWG
Sbjct: 396 FSKSPVSKVSCGWKHTAAIS-GGAIFTWGWG 425
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 54/132 (40%), Gaps = 28/132 (21%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--RIKMVPTPHLIPC-LEHAASGKDRPL 273
+A GG HTL L++ G+V+ G GQLG+ R P IP H ++G +
Sbjct: 135 IACGGAHTLFLTESGRVYATGLNNFGQLGISDEKRFSTEPVEVRIPKEAMHISAGYNHSC 194
Query: 274 LVRQG------SVNSSGKAGRS-------------------YVKEIACGGRHSAVVTDAG 308
+V VNS+G+ G +K A G HS V D G
Sbjct: 195 VVTADGELYMWGVNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVADGG 254
Query: 309 ALLTFGWGLYGQ 320
+ ++G G G+
Sbjct: 255 EVFSWGDGRSGR 266
>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 3660
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR D+
Sbjct: 1882 VKKVAVHSGGRHATALTADGKVFSWGEGDDGKLGHFSRXNC-----------------DK 1924
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K+ R +++IACG HSA +T +G L T+G G YG+
Sbjct: 1925 PRLIE------ALKSRR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 1965
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 2863 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 2913
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 2914 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRY 2956
Query: 319 GQ 320
G+
Sbjct: 2957 GR 2958
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 113/304 (37%), Gaps = 71/304 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
P+P ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 1869 PVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWGEGDD-GKLGHFSRXNCDKPRL 1927
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 1928 IEALKSRRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 1972
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G VV + + +++ A DE S
Sbjct: 1973 ----TQLKPKMVKVLVGHRVV---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2025
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 2026 EGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 2084
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
++ G G+ V +A G H VTDAG + +G
Sbjct: 2085 VV-----------------------EGLRGKKIV-HVAVGALHCLAVTDAGQVYAWGDND 2120
Query: 318 YGQR 321
+GQ+
Sbjct: 2121 HGQQ 2124
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 3041 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3099
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 3100 CTEDGEVYTWG 3110
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 105/274 (38%), Gaps = 49/274 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
GG A + GK+ G A + S G P P + +S VVK A G
Sbjct: 1833 AGGSKSLFAVTVEGKVYACGEATNGRLGLGVSS--GTVPVPRQVTALSSYVVKKVAVHSG 1890
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++T G+V++WG D G G F + + K + ++ A
Sbjct: 1891 GRHATALTADGKVFSWG----------EGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIA 1940
Query: 173 GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
TSS E GD L P +V + G ++ +VA G R T
Sbjct: 1941 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLVGHRVVQVACGSRDAQT 2000
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L L+D G V+ WG G G+LG G + G + P + + +N G
Sbjct: 2001 LALTDEGLVFSWGDGDFGKLGRG-----------------GSEGCNVPQNIER--LNGQG 2041
Query: 285 KAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
V +I CG + S +T +G + T+G G Y
Sbjct: 2042 ------VCQIECGAQFSLALTKSGVVWTWGKGDY 2069
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P +V G KI VA G H L ++D GQV+ WG GQ G G+
Sbjct: 2075 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGT 2128
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 36/73 (49%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 2888 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 2939
Query: 117 VSVTEAGEVYTWG 129
VT AG +YTWG
Sbjct: 2940 ACVTAAGGLYTWG 2952
>gi|388855483|emb|CCF50929.1| uncharacterized protein [Ustilago hordei]
Length = 546
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 82/189 (43%), Gaps = 41/189 (21%)
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR-------------------ECVPSAK 138
P ++ +V AA G +H + +T +G VY+ G E P K
Sbjct: 123 LPSGSKGQIVFAACGRSHTLLITSSGSVYSAGLNTSGQCAHPESQTVPIFTRIETAPFIK 182
Query: 139 -----VTRDFGSAGSFQKDSTGKQSAL-PTEQAPPSDKRAGEEVVKRRKTSSAREESENP 192
+ G S ++GK + +E+ + R GE TSS R
Sbjct: 183 ERDPIIAASCGLTFSMLLTASGKVYTMGSSEKGQLGNGRTGEHF-----TSSNRLA---- 233
Query: 193 ASGDEFFTLS-PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
F T S P LV KIT++A G +HT+ + + G V+ WG+GG G+LGLGS+
Sbjct: 234 -----FNTFSEPFLVKQLADKKITQIACGQQHTIAMDEDGYVYVWGFGGYGRLGLGSQQD 288
Query: 252 MVPTPHLIP 260
+ TP L+P
Sbjct: 289 QL-TPTLVP 296
>gi|307186651|gb|EFN72134.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
Length = 815
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 82/228 (35%), Gaps = 75/228 (32%)
Query: 22 VYMWGYLPGTSPEKSPILSP--IPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGS 77
VY WGY K L+ +PA++ G D+ +LA ++SGK+ WGS
Sbjct: 397 VYSWGYNDNCRLGKLDSLATTYLPAKMDSLRGKRIIDIASNNYN-SLALTDSGKIYVWGS 455
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
+ T + P + + + A G + +++T G++Y+WG
Sbjct: 456 VN-------------FTKKSLPDQCQVNPCQIACGMSFVMALTNDGKLYSWG-------- 494
Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
T +G G SEN
Sbjct: 495 --TNTYGQLGI---------------------------------------SSEND----- 508
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
L PCL+T V I K+ G H+L L+ G ++ WG EGQLG
Sbjct: 509 ---LYPCLITSLENVHIDKIVCGSEHSLALTSKGHIYSWGSNHEGQLG 553
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 10/110 (9%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSAD 79
+Y WG + +S + +P D+ CG FA+A ++ GKL +WG +
Sbjct: 61 IYTWGNIKYSSSYYDIVSTPYQVNF-------DIIHIACGSSFAMALNKDGKLYSWG-LN 112
Query: 80 DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ + S K P ++VK G H +++ G++Y+WG
Sbjct: 113 NYGQLGINSTKENYDPCLITSLIHVTIVKVVCGLEHSLALNSEGKIYSWG 162
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 78/221 (35%), Gaps = 66/221 (29%)
Query: 39 LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
++ + RL G C LA ++SGK+ TWG+ Y
Sbjct: 30 INSLSTRLTGEHITDIACNNY--ICLALTDSGKIYTWGNIKYSSSYYDIVST-------- 79
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS 158
P ++ A G + +++ + G++Y+WG ++G G
Sbjct: 80 PYQVNFDIIHIACGSSFAMALNKDGKLYSWG----------LNNYGQLG----------- 118
Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVA 218
+S +E + PCL+T V I KV
Sbjct: 119 -----------------------INSTKENYD------------PCLITSLIHVTIVKVV 143
Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
G H+L L+ G+++ WG +GQLG G + + P ++
Sbjct: 144 CGLEHSLALNSEGKIYSWGSNSKGQLGHGKKTEREIKPVML 184
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 26/105 (24%)
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
++A G + L++ G+++ WG GQLG+ S + P LI LE+
Sbjct: 473 QIACGMSFVMALTNDGKLYSWGTNTYGQLGISSENDLYPC--LITSLENV---------- 520
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
++ +I CG HS +T G + ++G GQ
Sbjct: 521 --------------HIDKIVCGSEHSLALTSKGHIYSWGSNHEGQ 551
>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
Length = 658
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 104/282 (36%), Gaps = 48/282 (17%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G LA SGK+ +WG + GQ S H TP V + A G A +
Sbjct: 117 GSDHVLALDASGKIRSWGRGE-SGQLGHASFSHSSTPSIIDELASQRVKEVACGVAFSAA 175
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA-GEEVV 177
+ E G++YTWG +G G + S+ LP+ A G +
Sbjct: 176 LMEGGQLYTWGCNR----------YGQLGQGDRTSSAIPRMLPSMNHRHVHLMACGAAHI 225
Query: 178 KRRKTSSAREESENPASGD------EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
TS N + G + L P V + G+ I ++ AG H+ +++ G
Sbjct: 226 VVLTTSRDVYTWGNNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSFG 285
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
++ WG G GQLG G KD P L+ S ++
Sbjct: 286 DIYTWGRGDFGQLGHGD-----------------MESKDIPTLL-------SPLDPKTQA 321
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQRMAKCLAGDGINM 333
I G +T +GA+ ++G +GQ G G++M
Sbjct: 322 SLIVSGADFIMAMTYSGAVYSWGRNCFGQ------LGHGVDM 357
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 94/263 (35%), Gaps = 23/263 (8%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F+ A E G+L TWG + GQ P P V A G AH V
Sbjct: 169 GVAFSAALMEGGQLYTWG-CNRYGQLGQGDRTSSAIPRMLPSMNHRHVHLMACGAAHIVV 227
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+T + +VYTWG ++ F Q S S L +Q + +
Sbjct: 228 LTTSRDVYTWGNNSY---GQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSF 284
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVT-LNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
+ R + GD P L++ L+P + + + +G + ++ G V+ WG
Sbjct: 285 GDIYTWGRGDFGQLGHGDMESKDIPTLLSPLDPKTQASLIVSGADFIMAMTYSGAVYSWG 344
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY----VKE 293
GQLG G + H + P V + S A + +
Sbjct: 345 RNCFGQLGHGVDM-------------HYSKSNRFPSDVISPKIISFFAASEEHDAISLSS 391
Query: 294 IACGGRHSAVVTDAGALLTFGWG 316
I+CG H +T+ L F WG
Sbjct: 392 ISCGSHHVLAITEKKDTL-FAWG 413
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 43/110 (39%), Gaps = 25/110 (22%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G+ I + G H L L G++ WG G GQLG S TP +I L
Sbjct: 108 GLSIKLITCGSDHVLALDASGKIRSWGRGESGQLGHAS-FSHSSTPSIIDEL-------- 158
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
VKE+ACG SA + + G L T+G YGQ
Sbjct: 159 ----------------ASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQ 192
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 98/266 (36%), Gaps = 52/266 (19%)
Query: 22 VYMWGYLP----GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGS 77
VY WG G K L P R+ G K + G + TS G + TWG
Sbjct: 234 VYTWGNNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTS-FGDIYTWGR 292
Query: 78 AD--DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP 135
D G + S P T+AS++ + A + +++T +G VY+WG R C
Sbjct: 293 GDFGQLGHGDMESKDIPTLLSPLDPKTQASLIVSGADF--IMAMTYSGAVYSWG-RNC-- 347
Query: 136 SAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP---SDKRAGEE----------------- 175
FG G K + P++ P S A EE
Sbjct: 348 -------FGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVL 400
Query: 176 -VVKRRKTSSAREESENPASG----DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
+ +++ T A E+ G D F P V G+ + A H+++++ M
Sbjct: 401 AITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMIVLAAACSENHSVVVATM 460
Query: 231 --------GQVWGWGYGGEGQLGLGS 248
+V+ WG G GQLG GS
Sbjct: 461 PGSGPKGDMKVFSWGRGSFGQLGYGS 486
>gi|195996959|ref|XP_002108348.1| hypothetical protein TRIADDRAFT_20215 [Trichoplax adhaerens]
gi|190589124|gb|EDV29146.1| hypothetical protein TRIADDRAFT_20215, partial [Trichoplax
adhaerens]
Length = 388
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 20/122 (16%)
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
+ LSP + L +KI+++ G H L L+D +V+ WG G G+LGLGS
Sbjct: 125 YVLSPTAIELFSNIKISQITCGESHVLALTDDKEVYSWGCGEFGRLGLGS---------- 174
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+D ++ +N AG+ +K + CG S ++T +G ++ FG +
Sbjct: 175 ----------EDDYFSPQKVKINQVCLAGKGLIKSVHCGSDFSFLLTISGRVIAFGNNEH 224
Query: 319 GQ 320
Q
Sbjct: 225 NQ 226
>gi|158253947|gb|AAI48319.1| HERC2 protein [Homo sapiens]
Length = 703
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 25/109 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH L+ G+V+ WG G +G+LG SR+ D+
Sbjct: 514 VKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC-----------------DK 556
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P L+ + K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 557 PRLIE------ALKTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 597
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 92/237 (38%), Gaps = 47/237 (19%)
Query: 92 GETPEPFPLPTEAS-VVKAAA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
G P P + +S VVK A G H ++T G+V++WG D G G
Sbjct: 498 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG----------EGDDGKLG 547
Query: 148 SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTL 201
F + + K + + A TSS E GD L
Sbjct: 548 HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL 607
Query: 202 SPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P +V + G ++ +VA G R TL L+D G V+ WG G G+LG G
Sbjct: 608 KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG------------ 655
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
+ G + P + + +N G V +I CG + S +T +G + T+G G
Sbjct: 656 -----GSEGCNIPQNIER--LNGQG------VCQIECGAQFSLALTKSGVVWTWGKG 699
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 83/222 (37%), Gaps = 46/222 (20%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 501 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 559
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 560 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 604
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 605 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 657
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
P + G + ++ G + +L L+ G VW WG G
Sbjct: 658 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 699
>gi|145597074|ref|YP_001161371.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
gi|145306411|gb|ABP56993.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
Length = 477
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 91/238 (38%), Gaps = 49/238 (20%)
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
TP LP ++ AAG H ++VT AG WG FG G D
Sbjct: 94 STPIAVDLPAGTTITAIAAGHDHSLAVTSAGTALAWGNNL----------FGQLG----D 139
Query: 153 STGKQSALPTEQAPPSDKR-----AGEE---VVKRRKTSSAREESENPASGDEFFTL--S 202
+ S+ P P+ AG++ V T+ A +++ GD T +
Sbjct: 140 GSTTDSSTPIAVDLPAGTTVTAIAAGDDHSLAVTSAGTALAWGDNDRGELGDGTTTRRDT 199
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P V L G +T +AAG H+L L+ G V WG +GQLG G+
Sbjct: 200 PVDVDLPAGTTVTAIAAGIGHSLALTSAGTVLTWGLNSDGQLGDGTTTD----------- 248
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
P+ V AG + V IA G HS VT AG +L +G GQ
Sbjct: 249 ------SSTPIAVDL-------PAG-TTVTAIAAGSLHSLAVTTAGTILAWGNNSDGQ 292
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 94/281 (33%), Gaps = 83/281 (29%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+PI L G + + G +LA + +G + WG +D G+ + +TP
Sbjct: 147 TPIAVDLPAGTTVTAIAAGD-DHSLAVTSAGTALAWGD-NDRGELGDGTTTRRDTPVDVD 204
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
LP +V AAG H +++T AG V TWG
Sbjct: 205 LPAGTTVTAIAAGIGHSLALTSAGTVLTWGLN---------------------------- 236
Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
SD + G+ T P V L G +T +AA
Sbjct: 237 --------SDGQLGDGTTTDSST--------------------PIAVDLPAGTTVTAIAA 268
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
G H+L ++ G + WG +GQLG G+ P+ V
Sbjct: 269 GSLHSLAVTTAGTILAWGNNSDGQLGDGTTTN-----------------SSTPIAVNL-- 309
Query: 280 VNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ + I G HS VT AG+ L +G GQ
Sbjct: 310 ------PASTTITAIDGGRDHSLAVTSAGSALAWGDNDDGQ 344
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 89/222 (40%), Gaps = 26/222 (11%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P+ L G + + G G +LA + +G ++TWG + +GQ + TP
Sbjct: 199 TPVDVDLPAGTTVTAIAAG-IGHSLALTSAGTVLTWG-LNSDGQLGDGTTTDSSTPIAVD 256
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
LP +V AAG H ++VT AG + WG S G D T S+
Sbjct: 257 LPAGTTVTAIAAGSLHSLAVTTAGTILAWGNN-------------SDGQL-GDGTTTNSS 302
Query: 160 LPTEQAPPSDK--------RAGEEVVKRRKTSSAREESENPASGDEFFTLS--PCLVTLN 209
P P+ R V ++ A ++++ GD T S P V L
Sbjct: 303 TPIAVNLPASTTITAIDGGRDHSLAVTSAGSALAWGDNDDGQLGDGTTTNSSTPIAVNLP 362
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
+T AG H+L ++ G + WG +G+LG G+
Sbjct: 363 ADTTVTATTAGSLHSLAVTTAGTILAWGNNSDGRLGDGTTTN 404
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
T+ +PI +PA + GG +LA + +G + WG DD GQ +
Sbjct: 298 TTNSSTPIAVNLPAS-----TTITAIDGGRDHSLAVTSAGSALAWGDNDD-GQLGDGTTT 351
Query: 91 HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ TP LP + +V AG H ++VT AG + WG
Sbjct: 352 NSSTPIAVNLPADTTVTATTAGSLHSLAVTTAGTILAWG 390
>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 778
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 113/291 (38%), Gaps = 52/291 (17%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-----VVKAAAGWAHCVSV 119
A + SG ++ WG +D GQ L G TP P S V AAG H ++
Sbjct: 67 ALTGSGGVMCWG-GNDFGQ--LGDG----TPTTRSTPGAVSGLPSGVTAIAAGNYHTCAL 119
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
T +G V WG A + G+ +F + + G S LP+ + G+
Sbjct: 120 TGSGGVRCWG-------ANYSGQLGNGLTFGRSTPGAVSGLPS--GVTAIAAGGDHTCAL 170
Query: 180 RKTSSAREESEN----PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ +N G +P V+ P +T +AAGG HT L+ G+VW
Sbjct: 171 MSSGGVMCWGDNYYGQLGDGTTTNRRTPVAVSGLP-SGVTAIAAGGLHTCALTGSGEVWC 229
Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEH-----AASGKDRPLLVRQGSV-----NSSGK 285
WGY GQLG G+ TP + L AA G L+ G V N SG+
Sbjct: 230 WGYNYYGQLGDGTTTYSRSTPAAVGGLPSGMTAIAAGGLHTCALMSSGGVWCWGRNDSGQ 289
Query: 286 AGR----------------SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
G S V IA G H+ +T +G + +G +GQ
Sbjct: 290 LGDGSDTDSSTPVAVSGLPSGVTAIAAGDYHTCALTGSGEVWCWGGNGFGQ 340
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 107/285 (37%), Gaps = 41/285 (14%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA-AAGWAHCVSVTEAG 123
A SG + WG +D GQ L G ++ P + S V A AAG H ++T +G
Sbjct: 272 ALMSSGGVWCWGR-NDSGQ--LGDGSDTDSSTPVAVSGLPSGVTAIAAGDYHTCALTGSG 328
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT--EQAPPSDKRAGEEVVKRRK 181
EV+ WG G + + + S LP+ E D +
Sbjct: 329 EVWCWG-------GNGFGQLGDGTTTARSTPAAVSGLPSGVETIAAGDYHTCALMSSGGV 381
Query: 182 TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
R S G +P V+ P +T +AAGG HT L G VW WG
Sbjct: 382 WCWGRNNSGQLGDGTTTARSTPAAVSGLP-SGVTAIAAGGLHTCALMSSGGVWCWGLNNS 440
Query: 242 GQLGLGSRIKMVPTPHLIPCLEH-----AASGKDRPLLVRQGSV-----NSSGKAGR--- 288
GQLG GS TP + L AA G L G V N+SG+ G
Sbjct: 441 GQLGDGSDTDS-STPVAVSGLASGVETIAAGGWHTCALTSSGGVWCWGRNNSGQLGDGST 499
Query: 289 -------------SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
S V IA G H+ +T +G + +G+ L GQ
Sbjct: 500 IYHITPVAVSGLPSGVTAIAAGDYHTCALTGSGGVWCWGYNLSGQ 544
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 109/266 (40%), Gaps = 32/266 (12%)
Query: 22 VYMWGY-LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
V+ WGY L G + + P + G S V G A + SG + WG A+
Sbjct: 534 VWCWGYNLSGQLGDGTTTDRSTPVAVSGLTSGVTVIAAGRFHTCALTSSGGVWCWG-ANF 592
Query: 81 EGQSYLTSGKHGETPEPFP-LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKV 139
+GQ + + TP LP+ + + AA GW H ++T +GEV+ WG
Sbjct: 593 DGQLGDGTTTNRTTPVAVSGLPSGVTAI-AAGGW-HTCALTSSGEVWCWG-------DNY 643
Query: 140 TRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF 199
G + + + G S LP+ + AG E T + E GD ++
Sbjct: 644 YGQLGDGTTTNRSTPGAVSGLPSGVTAIA---AGWE-----HTCALTSSGEVWCWGDNYY 695
Query: 200 TLSPCLVTLN---PGV------KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
T N PG +T +AAG HT L+ G V WG G+GQLG G R
Sbjct: 696 GQLGDGTTTNRSTPGAVSGLPSGVTAIAAGVYHTCALTGSGGVMCWGNNGDGQLGDG-RP 754
Query: 251 KMVPTPHLIPCLEHAASGKDRPLLVR 276
TP + + A+ G P+++R
Sbjct: 755 LYRTTP--VDVVTSASWGVYLPMIIR 778
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 65/160 (40%), Gaps = 26/160 (16%)
Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
R S G + ++P V+ P +T +AAG HT L+ G VW WGY GQLG
Sbjct: 488 RNNSGQLGDGSTIYHITPVAVSGLP-SGVTAIAAGDYHTCALTGSGGVWCWGYNLSGQLG 546
Query: 246 LGS---RIKMVPTPHLIPCLEHAASGKDRPL-LVRQGSV-----NSSGKAGR-------- 288
G+ R V L + A+G+ L G V N G+ G
Sbjct: 547 DGTTTDRSTPVAVSGLTSGVTVIAAGRFHTCALTSSGGVWCWGANFDGQLGDGTTTNRTT 606
Query: 289 --------SYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
S V IA GG H+ +T +G + +G YGQ
Sbjct: 607 PVAVSGLPSGVTAIAAGGWHTCALTSSGEVWCWGDNYYGQ 646
>gi|405354387|ref|ZP_11023754.1| RCC1 repeat domain protein [Chondromyces apiculatus DSM 436]
gi|397092349|gb|EJJ23118.1| RCC1 repeat domain protein [Myxococcus sp. (contaminant ex DSM
436)]
Length = 837
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 100/266 (37%), Gaps = 26/266 (9%)
Query: 40 SPIPARLCGGDSWKDVCGGG---CGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE 96
S +P ++ G V GG F +A E G + +WG+ +Y H P
Sbjct: 576 SSVPVQVLGITGATAVAAGGDTLLAFTVALREDGTVWSWGN------NYFGMLGHPAWPS 629
Query: 97 ----PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+P V AAG H V++ + G V++WG G + Q+D
Sbjct: 630 TTQGAVQVPGLMDVTAIAAGNLHAVALRKNGSVWSWGRNSA-------GQLGDGTNIQRD 682
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
S L +A + R + T A +++ GD F P +
Sbjct: 683 SPVPLRELANVKAITA-GRDFAVALHDDGTVWAWGANDSGQLGDGTFATRPLPQQVQGLT 741
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH----AASG 268
+ V AG HTL L + G VW WG GQLG G+R PTP + AA
Sbjct: 742 GVVAVDAGDDHTLALRNDGTVWAWGNNDLGQLGDGTRTTQ-PTPVQMQGFRKVSAVAAGF 800
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEI 294
+L+ G+V G G S V I
Sbjct: 801 ISSVVLLENGTVWGWGAYGTSGVDLI 826
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 87/209 (41%), Gaps = 31/209 (14%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
A+A ++G + +WG + GQ L G + + P PL A+V AG V++ +
Sbjct: 653 AVALRKNGSVWSWGR-NSAGQ--LGDGTNIQRDSPVPLRELANVKAITAGRDFAVALHDD 709
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK---RAGEE---V 176
G V+ WG D G G D T LP + + AG++
Sbjct: 710 GTVWAWG----------ANDSGQLG----DGTFATRPLPQQVQGLTGVVAVDAGDDHTLA 755
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
++ T A ++ GD T P V + K++ VAAG +++L + G VWGW
Sbjct: 756 LRNDGTVWAWGNNDLGQLGDGTRTTQPTPVQMQGFRKVSAVAAGFISSVVLLENGTVWGW 815
Query: 237 G-YGGEGQLGLGSRIKMVPTPHLIPCLEH 264
G YG G + ++P P + H
Sbjct: 816 GAYGTSG-------VDLIPRPRQVRVSSH 837
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 113/309 (36%), Gaps = 54/309 (17%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A E G + TWGS S TP P T A+ + A G +H V++ + G
Sbjct: 204 ALKEDGSIWTWGSNAASQLGADISAGSRVTPMQVPGLTGATAI--AVGDSHTVALLKDGS 261
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
V+TWG + G AG ++ Q +P + + G V R+ +
Sbjct: 262 VWTWG-------DNRSGQLGDAGRESQNHIPAQ--VPGLASVVAIAAGGSRTVAVRQDGT 312
Query: 185 AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG----YGG 240
++ +F +P V + + A H ++L G VWGWG GG
Sbjct: 313 VWTWGTKQSNRQDF---NPTPVQVPGLTDVIAADASDNHVVVLRTDGTVWGWGRANLLGG 369
Query: 241 EGQLGLGSRIKMVPTPHLIPCL------EHAAS----------GKDRPLLVRQGSVNSSG 284
Q L +++ P L C EH + G D + G V S
Sbjct: 370 STQDWLTMPVQV---PDLADCKALSAGDEHTVALRADGTVWVWGTDDFGQLGNGGVPSDA 426
Query: 285 K----AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ-------------RMAKCLA 327
K G VK +A G + + + G++ +G YGQ R+A
Sbjct: 427 KPVQAQGLMAVKAVAAGNDWTVAIGEDGSVWAWGSNYYGQLGDGSRRSRSTPVRLAGLTE 486
Query: 328 GDGINMGSW 336
G +++GSW
Sbjct: 487 GKTVSVGSW 495
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 116/312 (37%), Gaps = 69/312 (22%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
IPA++ G S + GG +A + G + TWG+ Q + P P +P
Sbjct: 284 IPAQVPGLASVVAIAAGGS-RTVAVRQDGTVWTWGTKQSNRQDF--------NPTPVQVP 334
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
V+ A A H V + G V+ WG + ST +P
Sbjct: 335 GLTDVIAADASDNHVVVLRTDGTVWGWG----------------RANLLGGSTQDWLTMP 378
Query: 162 TEQAPPSDKRA---GEEVVKRRKTSSAREESENPASG-DEFFTLSPCLVTLNPG------ 211
+ +D +A G+E T + R + G D+F L V +
Sbjct: 379 VQVPDLADCKALSAGDE-----HTVALRADGTVWVWGTDDFGQLGNGGVPSDAKPVQAQG 433
Query: 212 -VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS--- 267
+ + VAAG T+ + + G VW WG GQLG GSR + TP + L +
Sbjct: 434 LMAVKAVAAGNDWTVAIGEDGSVWAWGSNYYGQLGDGSR-RSRSTPVRLAGLTEGKTVSV 492
Query: 268 GKDRPLLVRQ-GSVNSSGKA-------GRSY--------------VKEIACGGRHSAVVT 305
G +L+RQ GS+ + G G +Y VK +A HS V
Sbjct: 493 GSWHAVLLRQDGSLRTWGSGYSDVLGDGTTYSKDAAPVQAPELSGVKAVAAAYEHSVAVR 552
Query: 306 DAGALLTFGWGL 317
G + + WGL
Sbjct: 553 GDGTV--WSWGL 562
>gi|400597595|gb|EJP65325.1| GDP/GTP exchange factor [Beauveria bassiana ARSEF 2860]
Length = 555
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 102/257 (39%), Gaps = 63/257 (24%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
V++ A G H ++T ++ TWG + + RD G KD G +S +
Sbjct: 162 VIQIACGGMHVAALTHDHKILTWGVND---QGALGRDTTWDGGL-KDMDGNESDSDDDDD 217
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
T ES A G+EFF PG K ++ A T
Sbjct: 218 ---------------DTGINPSESTPTAVGEEFFA---------PGTKFVQIVASDSATF 253
Query: 226 ILSDMGQVWGWG--YGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPL------- 273
+L+ G+V+GWG +G LG IK+ P L+P L++ A+G + L
Sbjct: 254 VLTQDGRVYGWGTFRSSDGVLGFTESIKIQLRPMLLPTLKNITSLAAGSNHILALDTKGN 313
Query: 274 ---------------LVRQGSVNSSGKAG----RSYVKEIACGGRHSAVVTDAGALLTFG 314
++ + ++S G R + +IACGG HS + G L +G
Sbjct: 314 VLAWGCGQQNQLGRRIIERNKMSSLTPQGMGLPRGKISKIACGGYHSFALDKNGKL--WG 371
Query: 315 WGL--YGQRMAKCLAGD 329
WGL +G+ + AG+
Sbjct: 372 WGLNNFGEIGVQSNAGE 388
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 83/218 (38%), Gaps = 73/218 (33%)
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
P LPT ++ AAG H +++ G V WG C G+
Sbjct: 286 PMLLPTLKNITSLAAGSNHILALDTKGNVLAWG---C---------------------GQ 321
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
Q+ L G +++R K SS L+P + L P KI+K
Sbjct: 322 QNQL------------GRRIIERNKMSS----------------LTPQGMGL-PRGKISK 352
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
+A GG H+ L G++WGWG G++G+ S +G+D ++++
Sbjct: 353 IACGGYHSFALDKNGKLWGWGLNNFGEIGVQSN-----------------AGEDDAVILK 395
Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
+ + ++ G HS +D G L T+G
Sbjct: 396 PAKLTD---LDDHVITDMDGGVHHSLACSDQGKLFTWG 430
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 18/89 (20%)
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
V+ +G G G+LGLGS+ +GK +P+ V++ +N + A V
Sbjct: 119 DVYVFGEGTSGELGLGSK---------------KVNGK-KPIDVKRPRLNDNLDAKSVGV 162
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+IACGG H A +T +LT WG+ Q
Sbjct: 163 IQIACGGMHVAALTHDHKILT--WGVNDQ 189
>gi|397627901|gb|EJK68660.1| hypothetical protein THAOC_10141, partial [Thalassiosira oceanica]
Length = 447
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 123/301 (40%), Gaps = 58/301 (19%)
Query: 40 SPIPARL-CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
SP R+ CG + G FA+ ++++G+L G D K P
Sbjct: 112 SPHITRIDCGASGSAFILSDGRSFAVGSNKNGQL---GVGSDT--------KETSKPVLL 160
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW-------RECV--------PSAKVTRDF 143
LP V KAA G +TE G++YT G+ C+ P+ +
Sbjct: 161 DLP---PVAKAALGNNFSALLTEGGDIYTCGFGGSRMNGMGCLGHGDDTARPAPTLVNSL 217
Query: 144 GSAGSFQKD-STGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
G + KD G+ S AL TE EV+ S R N + D+ +
Sbjct: 218 VEDGCYAKDVHVGEYSMTALTTEG----------EVLTCGSGSYGR--LGNLETVDQLY- 264
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P V L I+++A G +L LS G ++GWG EGQLG G + P L+
Sbjct: 265 LEP--VELIGNDNISQIAGGSAFSLALSQEGVIYGWGRNNEGQLGTGMGMSGECQPSLLV 322
Query: 261 ----CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWG 316
C ++ + L +G++ G++ VK I+ G HSA VT G L T+G
Sbjct: 323 PRVCCCSNSVYAMEALPLPVEGNLE-----GKTVVK-ISAGKAHSAAVTSEGELFTWGMN 376
Query: 317 L 317
L
Sbjct: 377 L 377
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 70/172 (40%), Gaps = 30/172 (17%)
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR-------------ECVPSAKVTRD 142
EP L ++ + A G A +++++ G +Y WG EC PS V R
Sbjct: 266 EPVELIGNDNISQIAGGSAFSLALSQEGVIYGWGRNNEGQLGTGMGMSGECQPSLLVPRV 325
Query: 143 FGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT-- 200
+ S ALP P G+ VV K S+ + S S E FT
Sbjct: 326 CCCSNSVY-----AMEALPL---PVEGNLEGKTVV---KISAGKAHSAAVTSEGELFTWG 374
Query: 201 ----LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
L P L + KI VA G +T++L + G+++ G G G LGL S
Sbjct: 375 MNLSLDPKLESSLLHTKIVDVACGEYYTMVLDEAGRLYSLGRGKTGVLGLAS 426
>gi|297673949|ref|XP_002815015.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Pongo
abelii]
Length = 886
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR 271
V+ G H+L + G+V+ WG G EGQLG+G ++ TP I L + G
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHCH 139
Query: 272 PLLVRQGSVN---SSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
L + + N S G V I+CG H+AV+T G + TFG GQ
Sbjct: 140 SLALSKVQSNKPLSIGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQ 191
>gi|66358878|ref|XP_626617.1| RCC1 domain containing protein [Cryptosporidium parvum Iowa II]
gi|46228329|gb|EAK89228.1| RCC1 domain containing protein [Cryptosporidium parvum Iowa II]
Length = 1878
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 30/171 (17%)
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
R T E +N + + ++T PC+V KI++++ G H+L LSD G V+ WG
Sbjct: 134 RGYTEFGNEHDKNDLN-ESWYTPVPCIVNFPFNAKISRISCGANHSLALSDSGLVFAWGI 192
Query: 239 GGEGQLGLG------SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAG 287
G G LG G S +K+ P L AA + G V NS+G+ G
Sbjct: 193 GQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGARHSLCCNEDGQVFAWGSNSNGRLG 252
Query: 288 ------------------RSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ ++ +A G HS + G + T+G G G+
Sbjct: 253 TGGSYGMKTVPTQIKSLSQYHITLVAAGESHSGCIDSFGYIYTWGNGGSGK 303
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 47/195 (24%), Positives = 71/195 (36%), Gaps = 63/195 (32%)
Query: 59 GCGFALATSESGKLITWGSADDEGQ-SYLTSGKHGETPEPFPL---PTEASVVKAAAGWA 114
G +LA S+SG + WG GQ L +G+ + P + PT+ V+ AAG
Sbjct: 174 GANHSLALSDSGLVFAWGI----GQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGAR 229
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H + E G+V+ WG + G+ GS+ +PT+ S
Sbjct: 230 HSLCCNEDGQVFAWG-------SNSNGRLGTGGSY------GMKTVPTQIKSLSQ----- 271
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
IT VAAG H+ + G ++
Sbjct: 272 -------------------------------------YHITLVAAGESHSGCIDSFGYIY 294
Query: 235 GWGYGGEGQLGLGSR 249
WG GG G+LG G++
Sbjct: 295 TWGNGGSGKLGHGTQ 309
Score = 41.2 bits (95), Expect = 0.70, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
LN G I KVA G HTL+L+ G++ WG G G+LG S
Sbjct: 661 LNLGTPIIKVALGSSHTLVLTASGELITWGAGYYGRLGTNS 701
Score = 40.8 bits (94), Expect = 1.0, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-SVVKAAAGWAHCV 117
G L + SG+LITWG A G+ S K P P + +V A G H +
Sbjct: 673 GSSHTLVLTASGELITWG-AGYYGRLGTNSTKSHSNPIKIRFPIKGVQIVDIAVGSYHSM 731
Query: 118 SVTEAGEVYTWGWRECVPSAK 138
+V+ G+++ WG E V S K
Sbjct: 732 AVSSLGDLWVWGKAENVLSEK 752
Score = 39.7 bits (91), Expect = 2.2, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 45/111 (40%), Gaps = 16/111 (14%)
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
P + ++A G HTL+L G ++ WG GQLG+ +R + + K
Sbjct: 486 PSWSVRQIACGTSHTLLLVYGGTIFAWGDNKYGQLGVDTRRR-----------KSQNGDK 534
Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ L + S ++ +ACG HS G ++G G GQ
Sbjct: 535 NESFLNEPTEIKFS-----EPIRRVACGSWHSLCCDIKGNCFSWGRGDRGQ 580
>gi|429850121|gb|ELA25421.1| ran exchange factor prp20 pim1 [Colletotrichum gloeosporioides Nara
gc5]
Length = 430
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 98/268 (36%), Gaps = 86/268 (32%)
Query: 60 CGFALATSESGKLITWGS-ADDEGQSYLTSGKHGETPEPFP--LPTEASVVKAAAGWAHC 116
GFAL + +GK+ WGS A +G K +T E P +P + + A G H
Sbjct: 158 AGFAL--TAAGKVYGWGSFAGGDGNFGFLREKPPKTTERLPVLIPGLTDIKELAGGSDHI 215
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++T G V+ WG +G+Q+ L G +
Sbjct: 216 LALTNDGNVFAWG------------------------SGEQNEL------------GRRI 239
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ RR+ F TL P V L P K K+ AG H+ + G+VW +
Sbjct: 240 LARRR----------------FETLVPQRVGL-PKNKTAKIFAGSHHSFAIDTTGKVWAF 282
Query: 237 GYGGEGQLGLGSR----IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
G GQ G+ +R V +P +I LE V+
Sbjct: 283 GLNNFGQCGISTREDTGFTTVISPTVIKSLEGYK------------------------VR 318
Query: 293 EIACGGRHSAVVTDAGALLTFGWGLYGQ 320
I CG H+ T+ G +L +G GQ
Sbjct: 319 HIGCGLHHTVACTEEGEVLVWGRADDGQ 346
>gi|428164909|gb|EKX33919.1| hypothetical protein GUITHDRAFT_166344 [Guillardia theta CCMP2712]
Length = 784
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 25/118 (21%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P V G+ KVAAG H+L+L+D GQV+ G GQLGLG
Sbjct: 260 PAKVVYMDGLNTVKVAAGSYHSLVLTDFGQVYSMGLNANGQLGLGDY------------- 306
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
S + P L++ + + + IACG S ++DAG + +G +GQ
Sbjct: 307 ----SSRKAPTLIKYLATKN--------ISSIACGDYASYAISDAGEVFAWGDNSFGQ 352
>gi|354584103|ref|ZP_09003000.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
lactis 154]
gi|353197365|gb|EHB62858.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
lactis 154]
Length = 1286
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 22/211 (10%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT 102
P ++ G + + GG F+LA G + WG G L G + P +
Sbjct: 177 PVQVAGLNDVTAIAAGGY-FSLALKSDGTVWAWGV---NGDGELGDGTTTDRYVPVQVAG 232
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
V+ AAG +H ++VT+ G V+ WG +G+ G + + + +
Sbjct: 233 LTDVMAIAAGGSHSLAVTQDGTVWAWG----------KNTYGTLGDGTRTNRTRPVQIKN 282
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPAS----GDEFFTLSPCLVTLNPGVK-ITKV 217
Q + G + +T + +N G +L P V+ G++ + ++
Sbjct: 283 LQHIVAVAGGGYHSLALDRTGNVWSWGDNSQRQLGVGSNASSLIPVPVS---GIEHVREI 339
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
AAGG H++ + G VWGWG+ G GQLG G+
Sbjct: 340 AAGGFHSVAMKKDGTVWGWGFNGGGQLGDGT 370
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 114/291 (39%), Gaps = 49/291 (16%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +A G + TWGS ++ GQ + + P + V G+ H ++
Sbjct: 91 GVRSTMALRSDGTVWTWGS-NENGQLGIGTVTDMNVPGQVSGLSGIKAVSGGLGY-HSMA 148
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE--- 175
++E G V+TWG + + G+ + Q+++ P + A +D A
Sbjct: 149 LSEDGSVWTWGKND-------NGELGNGTTLQQNT-------PVQVAGLNDVTAIAAGGY 194
Query: 176 ---VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
+K T A + + GD T V + + +AAGG H+L ++ G
Sbjct: 195 FSLALKSDGTVWAWGVNGDGELGDGTTTDRYVPVQVAGLTDVMAIAAGGSHSLAVTQDGT 254
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH----AASGKDRPLLVRQGSVNSSGK--- 285
VW WG G LG G+R P I L+H A G L R G+V S G
Sbjct: 255 VWAWGKNTYGTLGDGTRTNRT-RPVQIKNLQHIVAVAGGGYHSLALDRTGNVWSWGDNSQ 313
Query: 286 -----------------AGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
+G +V+EIA GG HS + G + +GWG G
Sbjct: 314 RQLGVGSNASSLIPVPVSGIEHVREIAAGGFHSVAMKKDGTV--WGWGFNG 362
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 96/247 (38%), Gaps = 54/247 (21%)
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
K AG+ H S+ +GEVY+WG+ D G G+ G SA T
Sbjct: 37 KLVAGYYHTASLVSSGEVYSWGYG----------DRGQLGN------GTWSARTTPVMAK 80
Query: 168 SDKRAGEEVVKRRKTSSAREE--------SENPASGDEFFT--LSPCLVTLNPGVKITKV 217
+ R T + R + +EN G T P V+ G+K V
Sbjct: 81 GLNHVIDVHTGVRSTMALRSDGTVWTWGSNENGQLGIGTVTDMNVPGQVSGLSGIK--AV 138
Query: 218 AAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH----AASGKDRP 272
+ G G H++ LS+ G VW WG G+LG G+ ++ TP + L AA G
Sbjct: 139 SGGLGYHSMALSEDGSVWTWGKNDNGELGNGTTLQQ-NTPVQVAGLNDVTAIAAGGYFSL 197
Query: 273 LLVRQGS-----VNSSGK---------------AGRSYVKEIACGGRHSAVVTDAGALLT 312
L G+ VN G+ AG + V IA GG HS VT G +
Sbjct: 198 ALKSDGTVWAWGVNGDGELGDGTTTDRYVPVQVAGLTDVMAIAAGGSHSLAVTQDGTVWA 257
Query: 313 FGWGLYG 319
+G YG
Sbjct: 258 WGKNTYG 264
>gi|71020563|ref|XP_760512.1| hypothetical protein UM04365.1 [Ustilago maydis 521]
gi|46100407|gb|EAK85640.1| hypothetical protein UM04365.1 [Ustilago maydis 521]
Length = 548
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 84/190 (44%), Gaps = 45/190 (23%)
Query: 100 LPTEAS--VVKAAAGWAHCVSVTEAGEVYTWGWR----------ECVP------------ 135
LPT A+ +V AA G +H + +T +G VY+ G + VP
Sbjct: 123 LPTGANGQIVYAACGRSHTLLLTASGSVYSAGLNTSGQCGHPESQTVPIFTRIETAPFIK 182
Query: 136 --SAKVTRDFGSAGSFQKDSTGKQSAL-PTEQAPPSDKRAGEEVVKRRKTSSAREESENP 192
A V G S +GK + +E+ + R GE TSS R
Sbjct: 183 ERDAIVAASCGLTFSMLLTQSGKVYTMGSSEKGQLGNGRTGEHF-----TSSNRLA---- 233
Query: 193 ASGDEFFTLS-PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI- 250
F T S P LV KI +A G +HT+ L D G V+ WG+GG G+LGLGS+
Sbjct: 234 -----FNTFSEPFLVKQLADKKIVHIACGQQHTIALDDQGFVYVWGFGGYGRLGLGSQQD 288
Query: 251 KMVPTPHLIP 260
++VPT L+P
Sbjct: 289 QLVPT--LVP 296
>gi|145334859|ref|NP_001078775.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|62320260|dbj|BAD94537.1| UVB-resistance protein UVR8 - like [Arabidopsis thaliana]
gi|332010007|gb|AED97390.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 276
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 79/203 (38%), Gaps = 29/203 (14%)
Query: 115 HCVSVTEAGEVYTWGWRE--CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++TE+GE+Y WG E R G S K +P
Sbjct: 46 HTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFT 105
Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
+ + + + GD P V GV+IT++A GG H+L L++ G+
Sbjct: 106 MALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGK 165
Query: 233 VWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
V WG+GG GQLG S R + VPT +E A K +
Sbjct: 166 VLSWGHGGHGQLGSSSLRNQKVPTE-----IEALADKK---------------------I 199
Query: 292 KEIACGGRHSAVVTDAGALLTFG 314
IA GG SA +TD G L +G
Sbjct: 200 VFIASGGSSSAAITDGGELWMWG 222
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 27/116 (23%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-MVPTPHLIPCLEHAASGKD 270
V + V+ GG T+ L+ GQ+W WG +LG G + P P +P LE
Sbjct: 93 VPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMP--VPSLEG------ 144
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQRMAKCL 326
VR + +IACGG HS +T+ G +L++G G +GQ + L
Sbjct: 145 ----VR--------------ITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSL 182
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 77/203 (37%), Gaps = 63/203 (31%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGW 113
CGG F +A ++ G+L WG+ + L G + EP P+P+ + + A G
Sbjct: 100 CGGF--FTMALTKEGQLWNWGANSN---YELGRGDNLGGWEPMPVPSLEGVRITQIACGG 154
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H +++TE G+V +WG G G S Q +PTE +DK
Sbjct: 155 YHSLALTEEGKVLSWG-------------HGGHGQLGSSSLRNQK-VPTEIEALADK--- 197
Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
KI +A+GG + ++D G++
Sbjct: 198 ---------------------------------------KIVFIASGGSSSAAITDGGEL 218
Query: 234 WGWGYGGEGQLGLGSRIKMVPTP 256
W WG + QLG+ ++ TP
Sbjct: 219 WMWGNAKDFQLGVPGLPEIQTTP 241
>gi|296424151|ref|XP_002841613.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637858|emb|CAZ85804.1| unnamed protein product [Tuber melanosporum]
Length = 465
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 105/253 (41%), Gaps = 65/253 (25%)
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
LP + +V A G H ++++ G+VY+WG + + + G++
Sbjct: 72 LPEKVGIVAVAIGGMHGLALSHEGKVYSWGVND------------------QYALGRE-- 111
Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNP-GVKITKVA 218
T+ PP +V + S EE NP P L+T P G IT +A
Sbjct: 112 --TKYTPPVG-----DVGSDEDSDSDDEEPLNPLES------MPMLITAFPEGTVITNIA 158
Query: 219 AGGRHTLILSDMGQVWGWGYG--GEGQLGLGSRIKMVPTPHLIPCLEH---AASGKDRPL 273
AG ++ ++D G+V+GWG +G LG + ++ P L+P L++ + G D L
Sbjct: 159 AGDSVSIAVTDTGKVYGWGTFRCSDGILGFNEKTRIQSVPVLLPTLKNIVQVSVGTDHVL 218
Query: 274 -LVRQGSVNSSGKAG-------------------------RSYVKEIACGGRHSAVVTDA 307
L R+G+V + G R V+ +A G HS +T+
Sbjct: 219 GLTREGNVFAWGNGQQFQLGRRVVERTRLNGLIPREFGLPRHQVRYVATGSYHSFAITED 278
Query: 308 GALLTFGWGLYGQ 320
G + +G +GQ
Sbjct: 279 GKVWAWGLNQFGQ 291
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 77/196 (39%), Gaps = 52/196 (26%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKH-GETPEPFPLP------TEASVVKAAA 111
G + A +E GK+ WG + GQ + KH GE P+P E +V+ +A
Sbjct: 268 GSYHSFAITEDGKVWAWG-LNQFGQCGIYDPKHAGEDNTVVPVPTVVQGLIEHKIVQISA 326
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G H +VTE GE+ WG + G Q L E P
Sbjct: 327 GEHHSAAVTEDGELLVWGRLD----------------------GGQLGLDPETLP----- 359
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
E+VV+ SG + +P V P +K + + G H + +S G
Sbjct: 360 -AEDVVRD-------------VSGKPRYLSTPRAV---PDIKFSFIGCGTHHNIAISREG 402
Query: 232 QVWGWGYGGEGQLGLG 247
Q + WG+GG Q GLG
Sbjct: 403 QAYSWGFGGSYQTGLG 418
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 94/260 (36%), Gaps = 79/260 (30%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G ++A +++GK+ WG+ + K P LPT ++V+ + G H +
Sbjct: 160 GDSVSIAVTDTGKVYGWGTFRCSDGILGFNEKTRIQSVPVLLPTLKNIVQVSVGTDHVLG 219
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+T G V+ WG G+Q L G VV+
Sbjct: 220 LTREGNVFAWG------------------------NGQQFQL------------GRRVVE 243
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
R + + L P L P ++ VA G H+ +++ G+VW WG
Sbjct: 244 RTRLNG----------------LIPREFGL-PRHQVRYVATGSYHSFAITEDGKVWAWGL 286
Query: 239 GGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR----PLLVRQGSVNSSGKAGRSYVKEI 294
GQ G+ + +G+D V QG + + +I
Sbjct: 287 NQFGQCGI---------------YDPKHAGEDNTVVPVPTVVQGLIEHK-------IVQI 324
Query: 295 ACGGRHSAVVTDAGALLTFG 314
+ G HSA VT+ G LL +G
Sbjct: 325 SAGEHHSAAVTEDGELLVWG 344
>gi|108761023|ref|YP_629150.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
gi|108464903|gb|ABF90088.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
Length = 1466
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 115/290 (39%), Gaps = 49/290 (16%)
Query: 29 PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTS 88
PG +PE+ P L+ + A G D F LA E G + WGS G L
Sbjct: 198 PGLTPEQVPGLNGVVALAAGFD-----------FTLAVLEDGTVRAWGS---NGSGQLGD 243
Query: 89 GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS 148
G + P + + + + AG H +++ + G V+TWG +A
Sbjct: 244 GTSTQRLSPVKVSELSGITEVRAGTYHALALGKDGGVWTWG--------------SNASG 289
Query: 149 FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE-----------SENPASGDE 197
D T A+P + P +R + V S A + S GD
Sbjct: 290 QLGDGTWNDRAVPMQV--PGLERV-KAVASMDSDSLALLDTGAVFAWGANGSGQLGDGDT 346
Query: 198 FFTLSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL-GSRIKMVPT 255
+P V PG+ + V G +H L+L G +W WG G GQLG GS +VP
Sbjct: 347 TDRATPGPV---PGLNAVASVVGGAQHALVLRKDGTLWAWGGGLSGQLGHGGSERHVVPA 403
Query: 256 PHL-IPCLEHAASGKDRPL-LVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
P + + + A+G L + GSV + G+ + + + RH+AV
Sbjct: 404 PVMRLAGVTSMATGSFHSLAALGDGSVWAWGRNTYGQLGDGSTAERHAAV 453
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 120/311 (38%), Gaps = 55/311 (17%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT 102
P RL ++ V G +LA G + TWG + GQ L G + P +
Sbjct: 102 PVRLAALENIVSVVSGDA-HSLALGADGSVWTWG-GNSSGQ--LGDGTTTDRATPMRVAG 157
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
SVV AAG H +++ E G V+ WG T G G Q L
Sbjct: 158 LDSVVAVAAGDFHSLALREDGTVWAWG----------TNFHGQLGRGHT-----QPGLTP 202
Query: 163 EQAPPSDK----RAGEEV---VKRRKTSSAREESENPASGDEFFT--LSPCLVTLNPGVK 213
EQ P + AG + V T A + + GD T LSP V+ G
Sbjct: 203 EQVPGLNGVVALAAGFDFTLAVLEDGTVRAWGSNGSGQLGDGTSTQRLSPVKVSELSG-- 260
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH----AASGK 269
IT+V AG H L L G VW WG GQLG G+ P +P LE A+
Sbjct: 261 ITEVRAGTYHALALGKDGGVWTWGSNASGQLGDGTWNDRA-VPMQVPGLERVKAVASMDS 319
Query: 270 DRPLLVRQGSV-----NSSGKAGR---------------SYVKEIACGGRHSAVVTDAGA 309
D L+ G+V N SG+ G + V + G +H+ V+ G
Sbjct: 320 DSLALLDTGAVFAWGANGSGQLGDGDTTDRATPGPVPGLNAVASVVGGAQHALVLRKDGT 379
Query: 310 LLTFGWGLYGQ 320
L +G GL GQ
Sbjct: 380 LWAWGGGLSGQ 390
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 99/271 (36%), Gaps = 54/271 (19%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA G + WG+ G L G P + VV +G H ++
Sbjct: 1173 GAWHSLALLSDGTVWAWGA---NGFGQLGDGTSTPRTRPVQVAGLGDVVAIGSGGYHALA 1229
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT--EQAPPSDKRAGEE- 175
V G V+TWG+ FG G D T + +LPT E AG +
Sbjct: 1230 VCSDGSVWTWGYNA----------FGQLG----DGTAESRSLPTRVEGLEGVVAVAGGDH 1275
Query: 176 ---VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
+ T SA + + GD T V + + V AG HT+ L G
Sbjct: 1276 YSLALHSDGTLSAWGNNASGQLGDGTGTTRYSRVAVKGVDGVVDVRAGATHTVALRGDGT 1335
Query: 233 VWGWGYGGEGQLG---LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
VW WG GQLG G+R+++VP P +P L S
Sbjct: 1336 VWTWGDNAFGQLGDGASGTRMRLVPRP--VPNL--------------------------S 1367
Query: 290 YVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
V + G RH+ V G + T+G +GQ
Sbjct: 1368 SVSAVGAGARHTFAVALKGTVWTWGRNSHGQ 1398
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 93/244 (38%), Gaps = 50/244 (20%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA ++G + WG+ G L G + P P+P +V G H + + +
Sbjct: 321 SLALLDTGAVFAWGA---NGSGQLGDGDTTDRATPGPVPGLNAVASVVGGAQHALVLRKD 377
Query: 123 GEVYTWGW------------RECVPSAKVTRDFG----SAGSFQKDST---------GKQ 157
G ++ WG R VP A V R G + GSF + G+
Sbjct: 378 GTLWAWGGGLSGQLGHGGSERHVVP-APVMRLAGVTSMATGSFHSLAALGDGSVWAWGRN 436
Query: 158 SALPTEQAPPSDKRAG---EEVVKRRKTSSAREES-------------ENPAS--GDEFF 199
+ +++ A E + R +SA S N A GD
Sbjct: 437 TYGQLGDGSTAERHAAVRVEGLGGVRSVASAAHHSLAVGMDGTVWAWGRNAAGQLGDGT- 495
Query: 200 TLSPCLVTLNPGV-KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
TL PG+ +T VAAGG H L L G VW WGY GQLG G+ + + TP
Sbjct: 496 TLDRARPVAVPGLTSVTAVAAGGSHVLALRSDGSVWAWGYNALGQLGDGTTVDRL-TPVR 554
Query: 259 IPCL 262
+ L
Sbjct: 555 VSGL 558
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 124/339 (36%), Gaps = 85/339 (25%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT+P +P+ R+ G + V G F++A + G WG+ + GQ L G
Sbjct: 945 GTAPSLTPV------RVKGLERVASVAAGRA-FSVAVRDDGTAWAWGT-NPSGQ--LGDG 994
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG-----------------WRE 132
+ P + + + +AG H V+++ G V+TWG W
Sbjct: 995 TNHARSVPNQVTSLKGIRAMSAGAHHVVALSADGTVWTWGDNTLGQLGDGSSSPTGMWPR 1054
Query: 133 CVPSAK-------------------VTRDFGSA--GSFQKDSTGKQSAL-------PTEQ 164
VP + R +GS G TG Q P +
Sbjct: 1055 QVPELRGVEAVAAGEQFTVAVLLDGTARAWGSNEYGQLGDGKTGPQLTPMAVKIEGPKIR 1114
Query: 165 APPSDKRA-GEEVVKRRKTSSAREESENPAS--GDEFFTLSPCLVTLNPGVKITKVAAGG 221
P RA G+ V + + + +N GD T +T+ + V++G
Sbjct: 1115 PPVRTVRAWGQHAVVQMSDGTVQTWGDNTFGQLGDGTTTRRAVPLTVYGLASVVAVSSGA 1174
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
H+L L G VW WG G GQLG G+ TP + RP+ V
Sbjct: 1175 WHSLALLSDGTVWAWGANGFGQLGDGT-----STP------------RTRPVQV------ 1211
Query: 282 SSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
AG V I GG H+ V G++ T+G+ +GQ
Sbjct: 1212 ----AGLGDVVAIGSGGYHALAVCSDGSVWTWGYNAFGQ 1246
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 77/169 (45%), Gaps = 27/169 (15%)
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK-ITKVAAGGRHTLILSD 229
RA +V+ T A E+ + GD T V++ PGV + VA+G +H+L L+
Sbjct: 768 RAHTLMVRADGTVMAWGENGSGQLGDGTSTHRTGPVSV-PGVPCVRSVASGIQHSLALAC 826
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVR-QGSV----- 280
G VW WG GQLG G+ V TP L+ L A+G D + +R GSV
Sbjct: 827 DGTVWAWGANARGQLGDGTTTPRV-TPGLVEGLRGVVALAAGGDASVALRADGSVWSWGG 885
Query: 281 NSSGKAGRSYVKE---------------IACGGRHSAVVTDAGALLTFG 314
N+SG+ G + + +A G H+ V + GAL +G
Sbjct: 886 NASGQLGDGTLTDRALPAHVEHLSNAVAVAVGETHALAVGEDGALWAWG 934
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 100/258 (38%), Gaps = 24/258 (9%)
Query: 11 NEKMEECKETVVYMWGY-LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSES 69
+ + + V+ WG G + + + P + G S V GG LA
Sbjct: 469 HHSLAVGMDGTVWAWGRNAAGQLGDGTTLDRARPVAVPGLTSVTAVAAGGS-HVLALRSD 527
Query: 70 GKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
G + WG + GQ L G + P + +VV AAG +++ G V+TWG
Sbjct: 528 GSVWAWGY-NALGQ--LGDGTTVDRLTPVRVSGLGAVVAVAAGSYFSMALQSDGTVWTWG 584
Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALP--TEQAPPSDKRAGEEVVKRRKTSSARE 187
G G Q+ S + L T A S A V+ T A
Sbjct: 585 -------EGFEGQLGDGGGVQRLSPVRVEGLANITRVAAGS---AHALAVRGDGTVWAWG 634
Query: 188 ESENPASGDEFFT--LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
++ GD + P V PG++ IT V+ G H++ L G V WGY G GQL
Sbjct: 635 DNGEGQLGDGSWADRFRPVQV---PGLQGITAVSGGRSHSMALQGDGTVRAWGYNGYGQL 691
Query: 245 GLGSRIKMVPTPHLIPCL 262
G G+ V P LIP L
Sbjct: 692 GDGTLTSRV-RPALIPGL 708
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 100/288 (34%), Gaps = 40/288 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G L G ++ WG + G L G P +P V A+G H ++
Sbjct: 767 GRAHTLMVRADGTVMAWG---ENGSGQLGDGTSTHRTGPVSVPGVPCVRSVASGIQHSLA 823
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+ G V+ WG A G + + + G L A + G+ V
Sbjct: 824 LACDGTVWAWG-------ANARGQLGDGTTTPRVTPGLVEGLRGVVALAA---GGDASVA 873
Query: 179 RRKTSSAREESENPAS--GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
R S N + GD T + VA G H L + + G +W W
Sbjct: 874 LRADGSVWSWGGNASGQLGDGTLTDRALPAHVEHLSNAVAVAVGETHALAVGEDGALWAW 933
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS---GKDRPLLVRQG------SVNSSGKAG 287
G G GQLG G + TP + LE AS G+ + VR N SG+ G
Sbjct: 934 GANGSGQLGDGGTAPSL-TPVRVKGLERVASVAAGRAFSVAVRDDGTAWAWGTNPSGQLG 992
Query: 288 ------RSY---------VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
RS ++ ++ G H ++ G + T+G GQ
Sbjct: 993 DGTNHARSVPNQVTSLKGIRAMSAGAHHVVALSADGTVWTWGDNTLGQ 1040
>gi|449456530|ref|XP_004146002.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
Length = 463
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 117/292 (40%), Gaps = 65/292 (22%)
Query: 49 GDSWKDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPE-PFPLPTEASV 106
GD G CG F + +GK+ WG D G+ G E P +PT S
Sbjct: 115 GDDGSFELGISCGLFHSSLLVNGKVWIWGKGD--------GGRLGFGHENPVFVPTLNSR 166
Query: 107 VKA----AAGWAHCVSVTEAGEVYTWGW------------RECVPSAKVTRDFGSAGSFQ 150
+++ A G H V++ G+V+TWG+ RE VP ++
Sbjct: 167 LESVRCIALGGLHSVALNALGQVFTWGYGGFGALGHSVYHRELVP--RLVEGSWRGRIKH 224
Query: 151 KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS-PCLVTLN 209
++G +A TE +GE R R +E LS PC V
Sbjct: 225 IATSGAHTAAITE--------SGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPCRVRAL 276
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-MVPTPHLIPCLEHAASG 268
P + V+ GG T+ L G++W WG +LG G+ I P P +P LE
Sbjct: 277 P-APVAAVSCGGFFTMALGVDGKLWNWGANTNFELGRGNNIGGWEPKP--VPSLE----- 328
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
D P++ +I CGG HS V+T G +L++G+G +GQ
Sbjct: 329 -DTPII------------------QIVCGGYHSLVLTGDGKVLSWGYGGHGQ 361
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 112/291 (38%), Gaps = 47/291 (16%)
Query: 34 EKSPILSP-IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
++P+ P + +RL +S + + GG ++A + G++ TWG + G
Sbjct: 154 HENPVFVPTLNSRL---ESVRCIALGGL-HSVALNALGQVFTWGYG-----GFGALGHSV 204
Query: 93 ETPEPFPLPTEAS----VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS 148
E P E S + A AH ++TE+GEVYTWG E + G
Sbjct: 205 YHRELVPRLVEGSWRGRIKHIATSGAHTAAITESGEVYTWGRDEGDGRLGLGPGRGPNEG 264
Query: 149 FQKDSTGKQSALPTEQAPPSDKRAGEEV-----VKRRKTSSAREESENPASGDEFFTLSP 203
+ ALP AP + G V + + + G+ P
Sbjct: 265 GGLSIPCRVRALP---APVAAVSCGGFFTMALGVDGKLWNWGANTNFELGRGNNIGGWEP 321
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
V I ++ GG H+L+L+ G+V WGYGG GQLG S I+ P +I L
Sbjct: 322 KPVPSLEDTPIIQIVCGGYHSLVLTGDGKVLSWGYGGHGQLG-HSSIQNEKVPRVIDAL- 379
Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
D+ ++ IAC G SA VT G L +G
Sbjct: 380 -----ADKRVIY------------------IACCGSSSAAVTAEGKLYMWG 407
>gi|326533910|dbj|BAJ93728.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 439
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 85/249 (34%), Gaps = 76/249 (30%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A + SG + TWG + + P P E +V A AH ++TE+GE
Sbjct: 156 ALTASGDVFTWGYGGFGALGHYVYHRE-LLPRKVNCPWEGKIVHIATSGAHTAAITESGE 214
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YTWG E + G + K SALP
Sbjct: 215 LYTWGRDEGDGRLGLGSGGGPGEAGSLSVPSKVSALP----------------------- 251
Query: 185 AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
V + VA GG TL L+ GQ+W WG +L
Sbjct: 252 ---------------------------VPVAAVACGGFFTLALTSDGQLWSWGANSNFEL 284
Query: 245 GLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
G GS P ++P L++ +V ++ACGG HS +
Sbjct: 285 GRGSNSSDW-RPQIVPSLKNV------------------------HVIQVACGGYHSLAL 319
Query: 305 TDAGALLTF 313
TD G +L++
Sbjct: 320 TDEGEVLSW 328
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 26/107 (24%)
Query: 209 NPGVKITKVAA-GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
NP + +V A GG H+ L+ G V+ WGYGG G LG H +
Sbjct: 138 NPNLAGLRVLALGGIHSAALTASGDVFTWGYGGFGALG-----------HYV-------- 178
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFG 314
R LL R+ + GK + IA G H+A +T++G L T+G
Sbjct: 179 -YHRELLPRKVNCPWEGK-----IVHIATSGAHTAAITESGELYTWG 219
>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
Length = 1983
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 58/129 (44%), Gaps = 28/129 (21%)
Query: 192 PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
P+ L + +LN I +AAG H+L L+D G+++ WG G G+LG+GS
Sbjct: 171 PSKQKSLDKLQAIIQSLN---NIVGIAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDAN 227
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALL 311
+P + L++ S V IACG H+A +T G +
Sbjct: 228 -AESPRFVASLQN------------------------SKVVHIACGAHHTAAITTVGDVW 262
Query: 312 TFGWGLYGQ 320
T+G GL GQ
Sbjct: 263 TWGKGLRGQ 271
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 115/293 (39%), Gaps = 27/293 (9%)
Query: 29 PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYL 86
P + P K L + A + S ++ G G+ +LA +++GK+ +WGS G+ +
Sbjct: 167 PVSEPSKQKSLDKLQAII---QSLNNIVGIAAGYYHSLALNDTGKIFSWGSGS-WGKLGI 222
Query: 87 TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG--WRECVPSAKVTRDFG 144
S + E+P + VV A G H ++T G+V+TWG R + V +F
Sbjct: 223 GSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVGDVWTWGKGLRGQLGHKSVKEEFS 282
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPC 204
+ G Q + R+G+ S GD + P
Sbjct: 283 PRLNASLRKCGAQKIRCGDDHTLVILRSGQ------LYSMGANTHGQLGLGDATDRIIPT 336
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLE 263
LVT K+ + A G ++ L++ G+V+ +G E L R + +P LI +
Sbjct: 337 LVTGFANEKVIDIDAKGCRSIALTNTGKVFAFGNETEPHLNRIPRFVAGLPKSDLIIAVA 396
Query: 264 HAA----SGKDRPLLVRQGSVNSSGKAGRSY--------VKEIACGGRHSAVV 304
A + D L R +S ++ R V + CG H AV+
Sbjct: 397 RTAHFDFAISDTGQLFRWRPFSSEEESSRMLESFHAIKGVVRMFCGHNHMAVI 449
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 32/140 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCL-------- 262
+ + +A G T L+D G+V+ WG +G+LGLGS + + P L+ L
Sbjct: 553 MSVVFIACGKDSTAALTDTGKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQI 612
Query: 263 ----EHAASGKDRPLLVRQGSVNSSGKAG----RSY--------------VKEIACGGRH 300
HAA D GS N+ G+ G SY ++ IACGG H
Sbjct: 613 SLGRNHAACSTDMHKFFVWGS-NTFGQLGIPHISSYMPDPYEITSLREANIRSIACGGWH 671
Query: 301 SAVVTDAGALLTFGWGLYGQ 320
+ + T+ G++++ G G +GQ
Sbjct: 672 TLISTNTGSVMSCGKGWHGQ 691
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 81/228 (35%), Gaps = 76/228 (33%)
Query: 94 TPEPF-PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
TP+ P+ +V+ A G H ++ + G VY WG D G GS +
Sbjct: 1202 TPQEITSFPSNTKIVEVACGCEHSLARSFDGGVYAWG----------AGDRGQLGSLENF 1251
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
K + Q + KR +F LS
Sbjct: 1252 DCVKINYAFNPQPVLNLKR--------------------------YFILS---------- 1275
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A G H + L+ QV WG G GQLGL + TP ++ L+
Sbjct: 1276 ----IACGRWHNMTLTSERQVLSWGAGEFGQLGLDHNLSK-GTPQMVKALD--------- 1321
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
GR+ K I CGG HSA + ++G +L +G +YGQ
Sbjct: 1322 --------------GRAPCK-ILCGGWHSAAILESGKILLWGKNVYGQ 1354
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 91/254 (35%), Gaps = 54/254 (21%)
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
G Y S + + P+ + SVV A G ++T+ G+VYTWG SA+
Sbjct: 530 HGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKVYTWG-----KSAQGK 584
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
GS GK A+ P + VV + S R + +FF
Sbjct: 585 LGLGS---------GKPLAIVV---PQLVQDLSSHVVC--QISLGRNHAACSTDMHKFFV 630
Query: 201 L------------------SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
P +T I +A GG HTLI ++ G V G G G
Sbjct: 631 WGSNTFGQLGIPHISSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGKGWHG 690
Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
QLG G + +P + G G S++ +++ G SA
Sbjct: 691 QLGHGDYESLTALSKTLPYFKKIVEG-----------------FGDSFIVKVSAGKESSA 733
Query: 303 VVTDAGALLTFGWG 316
+T+ G L T+G G
Sbjct: 734 AITNKGRLFTWGKG 747
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 50/111 (45%), Gaps = 25/111 (22%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGK 269
G I +VAAG +H+L LS G+VW WG GQLG + K+ PTP LE
Sbjct: 1429 GKNICQVAAGDQHSLALSVFGEVWSWGGSPFGQLGHETITDKLAPTP----LLERHKIPP 1484
Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
D VK IACG SA ++ G + T+G G G+
Sbjct: 1485 D--------------------VKSIACGYTFSAAMSAKGEVFTWGNGESGE 1515
Score = 44.3 bits (103), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 29/136 (21%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE----HAASGK 269
I V AGG H+ LS G ++ WG GQLGLG+ +P I L+ + G
Sbjct: 1749 IIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSAAEDSPTKISNLDGVVMDVSLGA 1808
Query: 270 DRPLLVRQGS--------VNSSGKAG------RSYVKEI-----------ACGGRHSAVV 304
+ ++ Q + +N++G+ G RS + + +CG H+A V
Sbjct: 1809 NHSAVLMQVTSPNLFTCGLNANGQLGLGDFVDRSTLTAVDALDDRQIVSASCGAAHTAAV 1868
Query: 305 TDAGALLTFGWGLYGQ 320
+ G L+T+G G GQ
Sbjct: 1869 SQYGDLITWGNGRNGQ 1884
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 76/192 (39%), Gaps = 22/192 (11%)
Query: 139 VTRDFGSAGSFQKDS---TGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE-----ESE 190
+T + G F++++ T ++ LP E++ D + ++ + E
Sbjct: 40 ITNLENTEGDFRREAALVTDYRTELPEEESEGYDYHMEKRYIRENIELQGSHVFMWGDGE 99
Query: 191 NPASGD--EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
N G+ E P +V V + A G +HTL LS G V G GQLG+G
Sbjct: 100 NGKLGNQSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVLSCGSNVYGQLGMGD 159
Query: 249 RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAG 308
+ TP P K + L Q + S + IA G HS + D G
Sbjct: 160 HMLSRSTPVSEP-------SKQKSLDKLQAIIQSLNN-----IVGIAAGYYHSLALNDTG 207
Query: 309 ALLTFGWGLYGQ 320
+ ++G G +G+
Sbjct: 208 KIFSWGSGSWGK 219
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVK 108
+ + CG A A S+ G LITWG+ + GQ L +G + P LP + +VK
Sbjct: 1853 RQIVSASCGAAHTAAVSQYGDLITWGNGRN-GQLGLKAGLSKDIENPVQLPAICNDPMVK 1911
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECV 134
G + V+E GE+Y G+ +
Sbjct: 1912 VVCGQEVTIVVSEKGELYMAGYESTI 1937
>gi|383858545|ref|XP_003704761.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Megachile rotundata]
Length = 343
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 19/120 (15%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTPHLIP 260
SP L+ G+K+T ++A G H+ ++++ G ++ WG+ G+LGL K+V P L+
Sbjct: 201 SPKLIEALAGIKVTHISAAGSHSAVVTEQGDLYTWGWNTNGELGLPNQESKVVAVPTLVD 260
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
+ K ++VK++ CG + + D G L G YGQ
Sbjct: 261 ------------------FTDDQNKNVETFVKKVECGNNFTICMMDDGTLWGSGCNKYGQ 302
>gi|343425648|emb|CBQ69182.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 544
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 84/190 (44%), Gaps = 45/190 (23%)
Query: 100 LPTEAS--VVKAAAGWAHCVSVTEAGEVYTWGWR---EC-VPSAKVTRDFG--SAGSFQK 151
LP AS +V AA G +H + +T AG VY+ G +C P ++ F G F K
Sbjct: 123 LPAGASGQIVSAACGRSHTLLITAAGSVYSAGLNTSGQCGHPESQTVPLFTRIETGPFIK 182
Query: 152 D------------------STGKQSAL-PTEQAPPSDKRAGEEVVKRRKTSSAREESENP 192
D +GK + +E+ + R GE + +
Sbjct: 183 DRDPVVAASCGLTFSMLLTQSGKVYTMGSSEKGQLGNGRTGEHFTTSNRLA--------- 233
Query: 193 ASGDEFFTLS-PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI- 250
F T S P LV I ++A G +HT+ L D G V+ WG+GG G+LGLGS+
Sbjct: 234 -----FNTFSDPFLVKQLADKTIVQIACGQQHTIALDDQGFVYVWGFGGYGRLGLGSQQD 288
Query: 251 KMVPTPHLIP 260
++VPT L+P
Sbjct: 289 QLVPT--LVP 296
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 16/106 (15%)
Query: 41 PIPARLCGGDSWKD---VCGGGCG--FALATSESGKLITWGSADD-------EGQSYLTS 88
P+ R+ G KD V CG F++ ++SGK+ T GS++ G+ + TS
Sbjct: 170 PLFTRIETGPFIKDRDPVVAASCGLTFSMLLTQSGKVYTMGSSEKGQLGNGRTGEHFTTS 229
Query: 89 GK--HGETPEPFPLPTEA--SVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ +PF + A ++V+ A G H +++ + G VY WG+
Sbjct: 230 NRLAFNTFSDPFLVKQLADKTIVQIACGQQHTIALDDQGFVYVWGF 275
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 13/107 (12%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
+ + G +++L+ G+V+ G +GQLG G + T + + A + P
Sbjct: 187 VVAASCGLTFSMLLTQSGKVYTMGSSEKGQLGNGRTGEHFTTSNRL-----AFNTFSDPF 241
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
LV+Q + +IACG +H+ + D G + +G+G YG+
Sbjct: 242 LVKQ--------LADKTIVQIACGQQHTIALDDQGFVYVWGFGGYGR 280
>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pongo abelii]
Length = 4581
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 29/122 (23%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 3774 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 3824
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVTDAGALLTFGWGLY 318
PC DRP ++ ++ R V ++A GG HSA VT AG L T+G G Y
Sbjct: 3825 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 3867
Query: 319 GQ 320
G+
Sbjct: 3868 GR 3869
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 23/123 (18%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 539
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGL 317
+I SGK +V IACG +SA +T G L T+G G
Sbjct: 540 VISAF--------------------SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN 579
Query: 318 YGQ 320
YG+
Sbjct: 580 YGR 582
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 3952 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4010
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4011 CTEDGEVYTWG 4021
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 49/109 (44%), Gaps = 29/109 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +G T G+V+ WG G +G+LG SR+ P LI L
Sbjct: 2800 VKKVAVHSGTSQTGFXPVDGKVFSWGEGDDGKLGHFSRM-----PRLIEAL--------- 2845
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
K R +++IACG HSA +T +G L T+G G YG+
Sbjct: 2846 -------------KTKR--IRDIACGSSHSAALTSSGELYTWGLGEYGR 2879
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 100/270 (37%), Gaps = 66/270 (24%)
Query: 70 GKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
GK+ +WG DD G P + A G +H ++T +GE+YTWG
Sbjct: 2819 GKVFSWGEGDDG-----KLGHFSRMPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 2873
Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEEVV------KRRKT 182
E +G G D+T T+ P K G V+ + +T
Sbjct: 2874 LGE----------YGRLG--HGDNT-------TQLKPKMVKVLLGHRVIQVACGSRDAQT 2914
Query: 183 SSAREESENPASGD-EFFTLSP------CLVTLN----PGVKITKVAAGGRHTLILSDMG 231
+ +E + GD + + + P C + N G + ++ G + +L L+ G
Sbjct: 2915 LALTDEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2974
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
VW WG G +LG GS + V P ++ G G+ V
Sbjct: 2975 VVWTWGKGDYFRLGHGSDVH-VRKPQVV-----------------------EGLRGKKIV 3010
Query: 292 KEIACGGRHSAVVTDAGALLTFGWGLYGQR 321
G H VTD+G + +G +GQ+
Sbjct: 3011 ACSCSGALHCLAVTDSGQVYAWGDNDHGQQ 3040
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 12/82 (14%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFP-LPTEASVV 107
VC CG F+LA ++SG + TWG D Y G H P+ L + V
Sbjct: 2957 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVA 3011
Query: 108 KAAAGWAHCVSVTEAGEVYTWG 129
+ +G HC++VT++G+VY WG
Sbjct: 3012 CSCSGALHCLAVTDSGQVYAWG 3033
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 516 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 572
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 623
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 624 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 734 GSNDQCQHFDTLRVTK-PEPAALPGLD 759
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 3789 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 3848
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 3849 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 3892
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+A +G TL L+D VW WG G G+LG G + G P
Sbjct: 3893 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG-----------------GSDGCKVP 3935
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLY 318
+ ++S G V ++ CG + S +T +GA+ T+G G Y
Sbjct: 3936 M-----KIDSLTGLG---VVKVECGSQFSVALTKSGAVYTWGKGDY 3973
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 3799 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 3850
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 3851 ACVTAAGDLYTWG 3863
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 86/212 (40%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
++VK AA H +++ GEVY+WG G G G +P
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWGC-------------GDGGRL-----GHGDTVPL 535
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 593
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 594 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 651
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 683
>gi|403369334|gb|EJY84511.1| hypothetical protein OXYTRI_17643 [Oxytricha trifallax]
Length = 1141
Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats.
Identities = 44/150 (29%), Positives = 65/150 (43%), Gaps = 36/150 (24%)
Query: 203 PCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
PCLV G++ I +VA G +HT+ L+ G+++ WG G G LGLG +M P +I
Sbjct: 94 PCLVE---GIQDIVQVACGSQHTMALNRKGEIYAWGGGFYGALGLGD-ARMCDKPQIIQA 149
Query: 262 LEH------AASGKDRPLLVRQGSVNSSG--KAGR-----------------------SY 290
L+H AA + L V G KAG+
Sbjct: 150 LQHERIVDIAAGNRHSLFLAENQRVYGCGESKAGQLGLGQGNQHDRILSPQSITALSGQG 209
Query: 291 VKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
VK++ CG HS +T + + + G +GQ
Sbjct: 210 VKKVCCGKFHSLFLTHSKEVFSTGGNSFGQ 239
Score = 38.9 bits (89), Expect = 3.4, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 28/118 (23%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSD-MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
P + + N + I +A G HT +++ +G V+ G +G+LG+G + +PC
Sbjct: 41 PKICSFN--IVINYIACGDEHTAFIAEQVGHVYCMGSNADGKLGIGEKTLKSSN---VPC 95
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
L G + ++ACG +H+ + G + +G G YG
Sbjct: 96 LVE----------------------GIQDIVQVACGSQHTMALNRKGEIYAWGGGFYG 131
>gi|294875448|ref|XP_002767326.1| regulator of chromosome condensation, putative [Perkinsus marinus
ATCC 50983]
gi|239868889|gb|EER00044.1| regulator of chromosome condensation, putative [Perkinsus marinus
ATCC 50983]
Length = 1266
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 15/115 (13%)
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
V+L G + T V G H + + G++W WG G GQLG I+ V + +
Sbjct: 966 VSLGGGCRATTVGCGSYHAVAIDGEGRLWAWGRGEGGQLG----IEKVEAHYDV----QN 1017
Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
S RP+++ G RS +ACG H+A VT G L +GWG +GQ
Sbjct: 1018 DSIVTRPMMLTSG-------VSRSRFASVACGEAHTAAVTIGGQLYCWGWGEFGQ 1065
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 90/254 (35%), Gaps = 43/254 (16%)
Query: 40 SPIPARLCGGDSWKDV-CGGGCG---------FALATSESGKLITWGSAD------DEGQ 83
SP +R+ G+ +V GGGC A+A G+L WG + ++ +
Sbjct: 951 SPTSSRVGRGEGVVEVSLGGGCRATTVGCGSYHAVAIDGEGRLWAWGRGEGGQLGIEKVE 1010
Query: 84 SYLTSGKHGETPEPFPLPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
++ P L + S A G AH +VT G++Y WGW E ++
Sbjct: 1011 AHYDVQNDSIVTRPMMLTSGVSRSRFASVACGEAHTAAVTIGGQLYCWGWGE---FGQLG 1067
Query: 141 RDFGSAGSFQKDSTGKQSALPT----EQAPPSDKRAGEEVVKRRKT-------------S 183
F SA +F G PT E D G T S
Sbjct: 1068 LGF-SAETFPPGEGGNSCRCPTPEVVEVGTEKDGVVGSVACGGAFTACLTTLGDVWAWGS 1126
Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
+ + P T + PG + ++ G H L + GQV+ WG GQ
Sbjct: 1127 NESGQLALPPGAPLELTCPRKVTNFPPGKRFKALSCGFAHALAIDSQGQVYSWGSDCYGQ 1186
Query: 244 LGLGSRIKMVPTPH 257
LG R+ PT H
Sbjct: 1187 LG---RLNPPPTVH 1197
>gi|302799471|ref|XP_002981494.1| hypothetical protein SELMODRAFT_114812 [Selaginella moellendorffii]
gi|300150660|gb|EFJ17309.1| hypothetical protein SELMODRAFT_114812 [Selaginella moellendorffii]
Length = 420
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 83/205 (40%), Gaps = 25/205 (12%)
Query: 43 PARLCGGDSWKDVCGGGCGF-ALATSESGKLITWGSADDEGQSYLTSG-KHGETPEPFPL 100
P R+ G +S + G G ++A E G L +WGS+ GQ L G P+
Sbjct: 99 PQRVRGMESTRVRAAAGSGVVSMAICEDGSLWSWGSSK-RGQLGLGLGVTRSLLPQKIHA 157
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
SV++ + GW H ++ T GE+++WG+ D G G L
Sbjct: 158 LAGKSVLQVSLGWGHALACTMDGELFSWGY----------HDSGRLGYL----------L 197
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
P +Q PS + + + R + P LV L KI +VA G
Sbjct: 198 PQDQ--PSMIQPSKNTLDRNDVGEKMLMEQLRKEDAPILQWEPKLVELPEPCKIIQVACG 255
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLG 245
H+L LS+ G ++ +G QLG
Sbjct: 256 LDHSLALSESGLLFSFGDNSTDQLG 280
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 86/234 (36%), Gaps = 87/234 (37%)
Query: 59 GCGFALATSESGKLITWG--SADDEGQSYLTSGKHGETPEPFPLPTEA-------SVVKA 109
G +LA SESG L ++G S D G+ E E P+ + VV
Sbjct: 255 GLDHSLALSESGLLFSFGDNSTDQLGR---------EITEDSPIISRVGGDLEGKQVVAI 305
Query: 110 AAGWAHCVSVTEAGEV-YTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AGW H ++V YTWGW S+G Q
Sbjct: 306 GAGWGHSLAVERCSRAAYTWGW----------------------SSGSQLG--------- 334
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
R+G V ++ EE ++P + VA G H+L L+
Sbjct: 335 --RSGPSSVPKKL-----EELDDP---------------------VVSVAGGRVHSLALT 366
Query: 229 DMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAAS------GKDRPLLV 275
QVW WG G G+LGLG SR + +P L+ LE A G D LL+
Sbjct: 367 SKHQVWTWGCGRNGRLGLGSSRDENLPV--LVDSLEEHAEVIDVCCGYDHSLLL 418
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
I +VA G H+L L+ G++W WG EGQLG G +
Sbjct: 54 IARVACGHYHSLALTQSGELWAWGRNNEGQLGRGEK 89
>gi|67541629|ref|XP_664582.1| hypothetical protein AN6978.2 [Aspergillus nidulans FGSC A4]
gi|40742434|gb|EAA61624.1| hypothetical protein AN6978.2 [Aspergillus nidulans FGSC A4]
gi|259483716|tpe|CBF79334.1| TPA: RCC1 Chromatin-associated guanine nucleotide exchange factor
for Ran (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 533
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 94/240 (39%), Gaps = 55/240 (22%)
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
P LP + VV+ A G HCV++T +V TWG G+ +D+T
Sbjct: 140 NPHLLPDDVGVVQVAVGGMHCVALTHDNKVLTWG-------------VNDQGALGRDTTW 186
Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNP-GVKI 214
+ + + + S + +NP T + + P G I
Sbjct: 187 EGGYKDMDN-------------RDSDSDSDSDSDDNPDLNPHECTPTAIPSSAFPHGTVI 233
Query: 215 TKVAAGGRHTLILSDMGQVWGWG--YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+VAAG + L+D GQV+GWG +G LG ++ K+ TP L+P L+
Sbjct: 234 VEVAAGDSSSFALTDEGQVYGWGTFRSNDGILGFDAKTKVQTTPKLLPDLKK-------- 285
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQRMAKCLAGDGIN 332
+K + CG H + D GA+L++G G Q + + + +N
Sbjct: 286 ------------------IKHLVCGDNHVLALNDKGAVLSWGSGQQNQLGRRIIERNKLN 327
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 99/246 (40%), Gaps = 51/246 (20%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDE--GQSYLTS 88
T+P+ P L I +CG + LA ++ G +++WGS G+ +
Sbjct: 275 TTPKLLPDLKKIKHLVCGDN-----------HVLALNDKGAVLSWGSGQQNQLGRRIIER 323
Query: 89 GK-HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
K +G P F LP +V AG H +V ++G+V+ WG FG G
Sbjct: 324 NKLNGLQPREFGLPK--GIVHIGAGAFHSFAVHQSGKVFAWGLNS----------FGETG 371
Query: 148 SFQKDSTGKQSAL--PTEQAPPSDKRAGEEVVKRRKTSSAREESE--------NPASGDE 197
++++ ++A+ PT S K + + +A ++ E +G +
Sbjct: 372 -IRENAGDSEAAIVHPTVVDSLSKKNVTQICGGAHHSIAATQDGECLVWGRLDGYQTGLK 430
Query: 198 FFTLSPCLV--------------TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
TL V T PG+K VAAG H++ + G+ W WG+ Q
Sbjct: 431 IDTLPDDAVIKDERDRPRILIEPTAVPGIKAKAVAAGSDHSIAIDTSGRPWSWGFSATYQ 490
Query: 244 LGLGSR 249
G G++
Sbjct: 491 TGQGTQ 496
>gi|213514362|ref|NP_001133817.1| Williams-Beuren syndrome chromosomal region 16 protein homolog
[Salmo salar]
gi|209155436|gb|ACI33950.1| Williams-Beuren syndrome chromosomal region 16 protein homolog
[Salmo salar]
Length = 450
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 86/228 (37%), Gaps = 43/228 (18%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQK 151
++ V + G H + +TE G+VY GW C V D Q+
Sbjct: 215 DSPVTQVVCGQDHSLFLTETGKVYACGWGADGQTGLGHHNMCARPVAVGGDLAGV-RVQQ 273
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
+T ++ Q E ++ + A + + SP L+
Sbjct: 274 VTTYGDCSMAVSQDGQLYGWGNSEYLQLSSVTEATQIN------------SPRLLPFERV 321
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
K+T+VA GG IL++ G+V+ WGY G LG G + TP L+P
Sbjct: 322 GKVTQVACGGTQVAILNERGEVFVWGY---GILGKGPNLSESQTPELVP----------- 367
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYG 319
P L + N + R I CG H A VTD G L +G + G
Sbjct: 368 PALFGRSEFNPAVTVSR-----IHCGLNHFAAVTDRGELFVWGKNVRG 410
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 129/359 (35%), Gaps = 84/359 (23%)
Query: 1 MEMNGSKREENEKMEECKETVVYMWGY------------LPGTSPEKSPILSPIPARLCG 48
+ G +R+ N K V++WG+ +P + +K P RL
Sbjct: 40 FQYVGKQRKPNHK--------VFVWGFSYTGALGIPSFVIPDSGRKKPRKYQLTPYRL-- 89
Query: 49 GDSWKDVCGGGCG--FALATSESGKLI-TWG-------------SADDEGQSYLTSGKHG 92
++ + + CG F L +S + L WG + D +SY +
Sbjct: 90 -ETEQQISSAACGYGFTLLSSSTKDLTKVWGMGLNRDSQLGFQRTQQDRHKSYDYVLEPS 148
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
P P P + VV+ A G AH + +T++ V++ G +G G +
Sbjct: 149 PVPLPLARPQQTRVVQVACGRAHSLVLTDSEGVFSLG----------NNAYGQCGRKMVE 198
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASG----------DEFFTLS 202
++ + D + V + + E + A G
Sbjct: 199 DEVYSASHIIHKMEGFDSPVTQVVCGQDHSLFLTETGKVYACGWGADGQTGLGHHNMCAR 258
Query: 203 PCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
P V + GV++ +V G ++ +S GQ++GWG QL + + +P L+P
Sbjct: 259 PVAVGGDLAGVRVQQVTTYGDCSMAVSQDGQLYGWGNSEYLQLSSVTEATQINSPRLLP- 317
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDAGALLTFGWGLYGQ 320
R G V ++ACGG A++ + G + +G+G+ G+
Sbjct: 318 ------------FERVGKVT-----------QVACGGTQVAILNERGEVFVWGYGILGK 353
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.132 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,176,189,912
Number of Sequences: 23463169
Number of extensions: 288037921
Number of successful extensions: 595017
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2820
Number of HSP's successfully gapped in prelim test: 1558
Number of HSP's that attempted gapping in prelim test: 544804
Number of HSP's gapped (non-prelim): 37024
length of query: 341
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 198
effective length of database: 9,003,962,200
effective search space: 1782784515600
effective search space used: 1782784515600
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 77 (34.3 bits)