Query 019445
Match_columns 341
No_of_seqs 267 out of 1889
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 16:11:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019445.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019445hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pym_A GAPDH 3, glyceraldehyde 100.0 2E-108 6E-113 774.7 34.0 331 6-338 1-331 (332)
2 3v1y_O PP38, glyceraldehyde-3- 100.0 3E-108 9E-113 775.2 32.4 335 5-340 2-337 (337)
3 3h9e_O Glyceraldehyde-3-phosph 100.0 5E-107 2E-111 768.7 33.7 334 5-341 6-340 (346)
4 4dib_A GAPDH, glyceraldehyde 3 100.0 3E-107 9E-112 768.5 30.7 331 6-340 4-336 (345)
5 3doc_A Glyceraldehyde 3-phosph 100.0 1E-106 4E-111 763.7 32.4 329 6-338 2-333 (335)
6 3ids_C GAPDH, glyceraldehyde-3 100.0 5E-107 2E-111 770.5 28.4 333 6-340 2-354 (359)
7 3lvf_P GAPDH 1, glyceraldehyde 100.0 9E-106 3E-110 757.1 30.6 331 4-341 2-338 (338)
8 3hja_A GAPDH, glyceraldehyde-3 100.0 2E-104 7E-109 751.6 25.5 329 5-338 20-356 (356)
9 2b4r_O Glyceraldehyde-3-phosph 100.0 5E-103 2E-107 744.1 30.2 334 3-338 8-344 (345)
10 1obf_O Glyceraldehyde 3-phosph 100.0 3E-102 1E-106 737.6 32.6 329 6-339 1-334 (335)
11 2ep7_A GAPDH, glyceraldehyde-3 100.0 3E-102 1E-106 738.2 27.0 329 6-339 2-340 (342)
12 1rm4_O Glyceraldehyde 3-phosph 100.0 3E-100 1E-104 727.4 32.7 331 6-340 1-335 (337)
13 2d2i_A Glyceraldehyde 3-phosph 100.0 6E-100 2E-104 733.4 32.5 330 6-339 2-336 (380)
14 1gad_O D-glyceraldehyde-3-phos 100.0 8E-100 3E-104 724.8 30.8 329 6-338 1-330 (330)
15 3cps_A Glyceraldehyde 3-phosph 100.0 5E-99 2E-103 722.9 30.8 333 5-339 16-352 (354)
16 3cmc_O GAPDH, glyceraldehyde-3 100.0 8.7E-99 3E-103 718.3 32.1 330 6-339 1-332 (334)
17 3b1j_A Glyceraldehyde 3-phosph 100.0 2.4E-98 8E-103 716.6 34.2 331 6-340 2-337 (339)
18 3e5r_O PP38, glyceraldehyde-3- 100.0 3.8E-98 1E-102 715.6 33.5 334 5-339 2-336 (337)
19 2g82_O GAPDH, glyceraldehyde-3 100.0 1.5E-98 5E-103 714.8 30.4 327 7-339 1-329 (331)
20 1u8f_O GAPDH, glyceraldehyde-3 100.0 2.2E-98 8E-103 717.8 31.1 334 5-340 2-335 (335)
21 1hdg_O Holo-D-glyceraldehyde-3 100.0 3.8E-98 1E-102 713.3 31.8 328 7-338 1-331 (332)
22 2x5j_O E4PDH, D-erythrose-4-ph 100.0 1.9E-96 6E-101 704.0 28.5 330 6-339 2-336 (339)
23 2yyy_A Glyceraldehyde-3-phosph 100.0 4.8E-53 1.6E-57 405.0 15.0 238 6-272 2-252 (343)
24 2r00_A Aspartate-semialdehyde 100.0 1.1E-47 3.7E-52 367.6 25.3 298 6-338 3-333 (336)
25 2yv3_A Aspartate-semialdehyde 100.0 2.1E-48 7.2E-53 371.7 20.3 293 7-338 1-329 (331)
26 2hjs_A USG-1 protein homolog; 100.0 1E-47 3.5E-52 368.3 24.7 298 5-338 5-335 (340)
27 1xyg_A Putative N-acetyl-gamma 100.0 6E-48 2.1E-52 372.4 16.9 294 5-339 15-346 (359)
28 1cf2_P Protein (glyceraldehyde 100.0 1.8E-48 6.3E-53 373.0 8.2 240 6-280 1-250 (337)
29 2ozp_A N-acetyl-gamma-glutamyl 100.0 1.2E-44 4E-49 347.8 18.5 289 6-338 4-331 (345)
30 2ep5_A 350AA long hypothetical 100.0 5.9E-45 2E-49 350.6 12.8 302 5-337 3-345 (350)
31 3dr3_A N-acetyl-gamma-glutamyl 100.0 3.2E-44 1.1E-48 342.7 17.7 289 6-338 4-329 (337)
32 4dpk_A Malonyl-COA/succinyl-CO 100.0 1.1E-43 3.7E-48 342.1 19.9 309 1-338 1-353 (359)
33 4dpl_A Malonyl-COA/succinyl-CO 100.0 1.1E-43 3.7E-48 342.1 18.1 309 1-338 1-353 (359)
34 1b7g_O Protein (glyceraldehyde 100.0 1.2E-43 4.1E-48 340.0 13.3 239 6-272 1-245 (340)
35 1ys4_A Aspartate-semialdehyde 100.0 1.3E-43 4.4E-48 341.9 11.8 300 5-336 7-349 (354)
36 3hsk_A Aspartate-semialdehyde 100.0 2.6E-42 9E-47 334.1 14.3 307 3-337 16-376 (381)
37 2czc_A Glyceraldehyde-3-phosph 100.0 4.5E-42 1.5E-46 328.7 11.9 236 6-275 2-246 (334)
38 2nqt_A N-acetyl-gamma-glutamyl 100.0 1.8E-41 6.1E-46 325.9 14.8 290 5-338 8-338 (352)
39 1t4b_A Aspartate-semialdehyde 100.0 5.1E-42 1.8E-46 331.5 10.2 242 7-280 2-306 (367)
40 3pwk_A Aspartate-semialdehyde 100.0 1.4E-40 4.9E-45 320.4 18.4 297 6-338 2-343 (366)
41 3tz6_A Aspartate-semialdehyde 100.0 3.2E-39 1.1E-43 308.7 20.1 293 7-337 2-341 (344)
42 1vkn_A N-acetyl-gamma-glutamyl 100.0 1.1E-38 3.9E-43 305.1 15.1 287 5-338 12-337 (351)
43 3pzr_A Aspartate-semialdehyde 100.0 1.5E-39 5E-44 313.5 8.3 295 7-338 1-368 (370)
44 3uw3_A Aspartate-semialdehyde 100.0 9.2E-39 3.2E-43 308.6 10.8 295 6-337 4-375 (377)
45 1nvm_B Acetaldehyde dehydrogen 99.2 8.8E-12 3E-16 117.6 7.7 213 5-270 3-230 (312)
46 1dih_A Dihydrodipicolinate red 98.7 1.1E-07 3.8E-12 87.8 11.5 102 1-127 1-103 (273)
47 3bio_A Oxidoreductase, GFO/IDH 98.6 4.1E-08 1.4E-12 92.0 7.8 91 1-125 4-94 (304)
48 3ijp_A DHPR, dihydrodipicolina 98.6 3.3E-08 1.1E-12 91.8 5.4 99 2-127 17-119 (288)
49 4f3y_A DHPR, dihydrodipicolina 98.6 2.7E-08 9.1E-13 91.9 4.3 99 4-127 5-104 (272)
50 4fb5_A Probable oxidoreductase 98.4 3.4E-07 1.2E-11 87.5 7.9 99 1-129 20-126 (393)
51 1f06_A MESO-diaminopimelate D- 98.4 6.7E-07 2.3E-11 84.3 8.6 89 5-129 2-90 (320)
52 4had_A Probable oxidoreductase 98.4 4.1E-07 1.4E-11 86.3 7.0 95 5-129 22-118 (350)
53 3e9m_A Oxidoreductase, GFO/IDH 98.3 6.4E-07 2.2E-11 84.5 7.4 98 1-129 1-99 (330)
54 3e82_A Putative oxidoreductase 98.3 1.1E-06 3.7E-11 84.2 8.2 97 1-129 1-99 (364)
55 3e18_A Oxidoreductase; dehydro 98.3 1.1E-06 3.8E-11 83.9 7.9 97 1-129 1-97 (359)
56 3gdo_A Uncharacterized oxidore 98.3 1.4E-06 4.8E-11 83.1 8.6 96 1-129 1-97 (358)
57 3qy9_A DHPR, dihydrodipicolina 98.3 7.2E-07 2.5E-11 80.9 6.1 82 5-127 2-83 (243)
58 3evn_A Oxidoreductase, GFO/IDH 98.3 8.3E-07 2.9E-11 83.6 6.8 98 1-129 1-99 (329)
59 3ec7_A Putative dehydrogenase; 98.3 1.6E-06 5.3E-11 82.8 8.5 98 3-129 20-119 (357)
60 3ezy_A Dehydrogenase; structur 98.3 9.6E-07 3.3E-11 83.6 6.6 95 6-129 2-96 (344)
61 3m2t_A Probable dehydrogenase; 98.3 9.9E-07 3.4E-11 84.2 6.6 99 1-129 1-100 (359)
62 3kux_A Putative oxidoreductase 98.3 2.3E-06 7.7E-11 81.4 9.0 93 5-129 6-99 (352)
63 3uuw_A Putative oxidoreductase 98.2 1.4E-06 4.6E-11 81.3 7.0 94 4-129 4-98 (308)
64 3fhl_A Putative oxidoreductase 98.2 1.6E-06 5.4E-11 82.9 7.5 96 1-129 1-97 (362)
65 3db2_A Putative NADPH-dependen 98.2 1.8E-06 6.3E-11 82.0 7.9 95 4-129 3-98 (354)
66 1tlt_A Putative oxidoreductase 98.2 2.1E-06 7.2E-11 80.4 8.0 95 1-129 1-97 (319)
67 4hkt_A Inositol 2-dehydrogenas 98.2 1.5E-06 5.2E-11 81.8 6.9 94 5-129 2-95 (331)
68 3euw_A MYO-inositol dehydrogen 98.2 2E-06 6.9E-11 81.3 7.8 94 6-129 4-97 (344)
69 3i23_A Oxidoreductase, GFO/IDH 98.2 1.6E-06 5.5E-11 82.4 6.9 95 6-129 2-97 (349)
70 4ew6_A D-galactose-1-dehydroge 98.2 1.2E-06 4.2E-11 82.7 6.0 90 3-129 22-113 (330)
71 4h3v_A Oxidoreductase domain p 98.2 5.9E-07 2E-11 85.8 3.8 96 4-129 4-107 (390)
72 3ohs_X Trans-1,2-dihydrobenzen 98.2 2E-06 6.9E-11 81.1 7.1 94 6-129 2-98 (334)
73 1ydw_A AX110P-like protein; st 98.2 1.7E-06 5.8E-11 82.5 6.4 100 3-129 3-103 (362)
74 3q2i_A Dehydrogenase; rossmann 98.2 1.9E-06 6.5E-11 81.9 6.5 95 5-129 12-107 (354)
75 3rc1_A Sugar 3-ketoreductase; 98.2 1.6E-06 5.4E-11 82.5 6.0 98 2-129 23-121 (350)
76 4gqa_A NAD binding oxidoreduct 98.2 1.2E-06 4E-11 85.1 5.0 95 5-129 25-128 (412)
77 3mz0_A Inositol 2-dehydrogenas 98.2 3E-06 1E-10 80.2 7.4 96 6-129 2-98 (344)
78 3f4l_A Putative oxidoreductase 98.1 3.8E-06 1.3E-10 79.6 7.8 94 6-129 2-97 (345)
79 1zh8_A Oxidoreductase; TM0312, 98.1 2.9E-06 9.9E-11 80.3 6.8 100 1-129 13-114 (340)
80 1h6d_A Precursor form of gluco 98.1 4.9E-06 1.7E-10 81.5 8.3 100 3-127 80-180 (433)
81 3ing_A Homoserine dehydrogenas 98.1 4.9E-06 1.7E-10 78.6 7.5 98 4-123 2-113 (325)
82 2ho3_A Oxidoreductase, GFO/IDH 98.1 5.7E-06 2E-10 77.6 7.6 94 6-129 1-94 (325)
83 3cea_A MYO-inositol 2-dehydrog 98.1 4.9E-06 1.7E-10 78.5 7.1 94 5-127 7-101 (346)
84 3mtj_A Homoserine dehydrogenas 98.1 7.2E-06 2.5E-10 80.5 8.4 95 3-129 7-111 (444)
85 2ixa_A Alpha-N-acetylgalactosa 98.1 7.6E-06 2.6E-10 80.3 8.4 101 4-127 18-121 (444)
86 3ic5_A Putative saccharopine d 98.0 4.7E-06 1.6E-10 65.4 5.3 99 5-129 4-102 (118)
87 2ejw_A HDH, homoserine dehydro 98.0 1.6E-05 5.6E-10 75.2 9.9 85 5-124 2-95 (332)
88 1lc0_A Biliverdin reductase A; 98.0 6.9E-06 2.4E-10 76.3 7.1 90 4-129 5-97 (294)
89 3c1a_A Putative oxidoreductase 98.0 5.7E-06 1.9E-10 77.3 5.3 93 5-129 9-101 (315)
90 1p9l_A Dihydrodipicolinate red 97.9 2.9E-05 9.9E-10 70.4 9.3 75 7-127 1-76 (245)
91 3do5_A HOM, homoserine dehydro 97.9 1.6E-05 5.3E-10 75.2 7.7 94 6-122 2-110 (327)
92 2nvw_A Galactose/lactose metab 97.9 6.1E-06 2.1E-10 82.0 4.9 101 2-129 35-146 (479)
93 2dc1_A L-aspartate dehydrogena 97.9 1.1E-05 3.9E-10 72.2 5.3 135 7-186 1-136 (236)
94 1xea_A Oxidoreductase, GFO/IDH 97.9 3.3E-05 1.1E-09 72.4 8.6 89 6-124 2-91 (323)
95 2p2s_A Putative oxidoreductase 97.9 2.1E-05 7.2E-10 74.0 7.3 95 4-129 2-98 (336)
96 3c8m_A Homoserine dehydrogenas 97.9 1.4E-05 5E-10 75.5 6.1 100 5-122 5-116 (331)
97 3btv_A Galactose/lactose metab 97.8 5.3E-06 1.8E-10 81.4 2.7 97 6-129 20-127 (438)
98 3u3x_A Oxidoreductase; structu 97.8 8.6E-06 3E-10 77.8 4.1 95 5-129 25-120 (361)
99 3v5n_A Oxidoreductase; structu 97.8 2E-05 6.7E-10 76.8 6.7 96 4-129 35-142 (417)
100 3o9z_A Lipopolysaccaride biosy 97.8 3.1E-05 1.1E-09 72.4 7.4 94 6-129 3-104 (312)
101 3upl_A Oxidoreductase; rossman 97.8 2.8E-05 9.6E-10 76.2 7.1 109 5-124 22-136 (446)
102 3moi_A Probable dehydrogenase; 97.8 1.6E-05 5.5E-10 76.5 5.2 94 6-129 2-96 (387)
103 3dty_A Oxidoreductase, GFO/IDH 97.8 2.2E-05 7.4E-10 75.9 5.6 99 4-127 10-115 (398)
104 3oa2_A WBPB; oxidoreductase, s 97.7 4.7E-05 1.6E-09 71.4 7.4 94 6-129 3-105 (318)
105 3ip3_A Oxidoreductase, putativ 97.7 1.8E-05 6.2E-10 74.6 3.5 96 6-129 2-99 (337)
106 3abi_A Putative uncharacterize 97.6 1.3E-05 4.6E-10 76.5 1.5 95 6-129 16-110 (365)
107 2glx_A 1,5-anhydro-D-fructose 97.6 8.9E-05 3E-09 69.4 6.6 91 7-127 1-92 (332)
108 4gmf_A Yersiniabactin biosynth 97.5 0.00024 8.2E-09 68.2 8.4 91 5-129 6-102 (372)
109 3oqb_A Oxidoreductase; structu 97.4 9.3E-05 3.2E-09 70.8 4.7 92 5-126 5-112 (383)
110 2dt5_A AT-rich DNA-binding pro 97.4 0.00017 5.8E-09 63.9 5.9 94 6-130 80-174 (211)
111 1j5p_A Aspartate dehydrogenase 97.4 0.00021 7.2E-09 64.9 6.5 80 6-127 12-91 (253)
112 1vm6_A DHPR, dihydrodipicolina 97.3 0.00099 3.4E-08 59.3 9.9 71 7-127 13-84 (228)
113 2vt3_A REX, redox-sensing tran 97.3 0.00029 9.9E-09 62.5 6.3 95 6-131 85-180 (215)
114 4ina_A Saccharopine dehydrogen 97.3 8.9E-05 3E-09 71.9 3.2 146 7-171 2-156 (405)
115 1ebf_A Homoserine dehydrogenas 97.1 0.00098 3.4E-08 63.6 7.8 35 5-39 3-40 (358)
116 1r0k_A 1-deoxy-D-xylulose 5-ph 97.0 0.00027 9.2E-09 68.0 3.1 35 1-37 1-37 (388)
117 3keo_A Redox-sensing transcrip 97.0 0.00049 1.7E-08 60.8 4.2 97 6-130 84-182 (212)
118 1y81_A Conserved hypothetical 96.9 0.0033 1.1E-07 51.6 8.3 84 6-128 14-101 (138)
119 2nu8_A Succinyl-COA ligase [AD 96.8 0.0016 5.4E-08 60.2 6.4 88 6-127 7-96 (288)
120 3ggo_A Prephenate dehydrogenas 96.8 0.004 1.4E-07 58.2 9.0 35 4-39 31-66 (314)
121 2d59_A Hypothetical protein PH 96.7 0.0046 1.6E-07 51.0 7.4 84 6-128 22-109 (144)
122 2i76_A Hypothetical protein; N 96.6 0.00073 2.5E-08 61.8 2.6 32 6-39 2-33 (276)
123 3dhn_A NAD-dependent epimerase 96.6 0.0035 1.2E-07 54.5 6.5 35 1-38 1-36 (227)
124 3ff4_A Uncharacterized protein 96.5 0.0041 1.4E-07 50.0 5.7 84 6-129 4-91 (122)
125 2duw_A Putative COA-binding pr 96.4 0.0076 2.6E-07 49.7 7.3 86 6-128 13-102 (145)
126 4huj_A Uncharacterized protein 96.4 0.0014 4.7E-08 57.9 2.9 34 5-39 22-55 (220)
127 3d1l_A Putative NADP oxidoredu 96.3 0.0069 2.4E-07 54.5 6.9 33 6-39 10-42 (266)
128 3c24_A Putative oxidoreductase 96.2 0.0065 2.2E-07 55.5 6.5 36 1-39 7-43 (286)
129 3b1f_A Putative prephenate deh 96.2 0.0071 2.4E-07 55.2 6.7 35 4-39 4-39 (290)
130 3ius_A Uncharacterized conserv 96.2 0.029 1E-06 50.4 10.4 33 5-38 4-36 (286)
131 3a06_A 1-deoxy-D-xylulose 5-ph 96.1 0.012 4.1E-07 55.9 7.8 110 6-127 3-115 (376)
132 3qvo_A NMRA family protein; st 96.1 0.012 4.1E-07 51.8 7.4 34 4-37 21-55 (236)
133 1iuk_A Hypothetical protein TT 96.0 0.0072 2.5E-07 49.6 5.1 88 6-130 13-104 (140)
134 2r6j_A Eugenol synthase 1; phe 96.0 0.0067 2.3E-07 55.7 5.2 37 1-38 5-43 (318)
135 1oi7_A Succinyl-COA synthetase 96.0 0.0075 2.6E-07 55.7 5.4 88 6-127 7-96 (288)
136 1qyd_A Pinoresinol-lariciresin 96.0 0.01 3.5E-07 54.1 6.3 35 1-38 1-36 (313)
137 2hmt_A YUAA protein; RCK, KTN, 95.9 0.0071 2.4E-07 48.4 4.7 36 1-37 1-36 (144)
138 2g1u_A Hypothetical protein TM 95.8 0.018 6.1E-07 47.5 6.7 30 7-37 20-49 (155)
139 3d0o_A L-LDH 1, L-lactate dehy 95.8 0.015 5E-07 54.3 6.6 39 1-39 1-39 (317)
140 3nkl_A UDP-D-quinovosamine 4-d 95.6 0.027 9.3E-07 45.4 7.1 92 5-125 3-97 (141)
141 3dqp_A Oxidoreductase YLBE; al 95.6 0.05 1.7E-06 46.9 9.1 30 8-38 2-32 (219)
142 3e48_A Putative nucleoside-dip 95.6 0.015 5.1E-07 52.5 5.8 31 8-38 2-33 (289)
143 2z2v_A Hypothetical protein PH 95.5 0.0075 2.6E-07 57.5 3.7 94 6-128 16-109 (365)
144 1qyc_A Phenylcoumaran benzylic 95.5 0.014 4.8E-07 53.1 5.3 34 1-37 1-35 (308)
145 3g0o_A 3-hydroxyisobutyrate de 95.4 0.02 6.8E-07 52.7 6.0 32 6-39 7-38 (303)
146 2axq_A Saccharopine dehydrogen 95.3 0.0099 3.4E-07 58.6 3.8 97 6-127 23-119 (467)
147 1bg6_A N-(1-D-carboxylethyl)-L 95.2 0.016 5.5E-07 54.2 4.9 32 4-36 2-33 (359)
148 1hdo_A Biliverdin IX beta redu 95.2 0.032 1.1E-06 47.2 6.3 31 7-38 4-35 (206)
149 2yv2_A Succinyl-COA synthetase 95.1 0.03 1E-06 51.8 6.3 89 6-128 13-104 (297)
150 2yv1_A Succinyl-COA ligase [AD 95.1 0.022 7.5E-07 52.7 5.3 89 6-128 13-103 (294)
151 3qsg_A NAD-binding phosphogluc 95.1 0.015 5E-07 54.0 4.2 33 5-39 23-56 (312)
152 3oj0_A Glutr, glutamyl-tRNA re 95.1 0.0035 1.2E-07 51.2 -0.2 31 7-39 22-52 (144)
153 3ew7_A LMO0794 protein; Q8Y8U8 95.1 0.055 1.9E-06 46.3 7.5 30 8-38 2-32 (221)
154 3r6d_A NAD-dependent epimerase 95.1 0.019 6.5E-07 49.8 4.5 32 5-37 4-37 (221)
155 3gpi_A NAD-dependent epimerase 94.9 0.022 7.6E-07 51.3 4.7 32 6-38 3-34 (286)
156 2g5c_A Prephenate dehydrogenas 94.9 0.048 1.7E-06 49.3 6.9 32 7-39 2-34 (281)
157 3i6i_A Putative leucoanthocyan 94.8 0.023 7.8E-07 52.9 4.6 33 6-39 10-43 (346)
158 4dll_A 2-hydroxy-3-oxopropiona 94.8 0.018 6.1E-07 53.6 3.8 32 6-39 31-62 (320)
159 2wm3_A NMRA-like family domain 94.7 0.027 9.3E-07 51.1 4.8 33 6-38 5-38 (299)
160 2hjr_A Malate dehydrogenase; m 94.7 0.089 3E-06 49.2 8.4 34 5-39 13-46 (328)
161 1yb4_A Tartronic semialdehyde 94.7 0.02 6.8E-07 52.1 3.7 31 6-37 3-33 (295)
162 3tri_A Pyrroline-5-carboxylate 94.5 0.04 1.4E-06 50.3 5.5 34 5-39 2-37 (280)
163 1i36_A Conserved hypothetical 94.5 0.066 2.2E-06 47.9 6.7 30 8-39 2-31 (264)
164 3k96_A Glycerol-3-phosphate de 94.3 0.044 1.5E-06 52.0 5.4 24 6-29 29-52 (356)
165 3e8x_A Putative NAD-dependent 94.3 0.34 1.2E-05 42.1 10.7 33 5-38 20-53 (236)
166 3llv_A Exopolyphosphatase-rela 94.2 0.033 1.1E-06 44.8 3.7 36 1-37 1-36 (141)
167 1ldn_A L-lactate dehydrogenase 94.1 0.06 2.1E-06 50.1 5.7 38 1-39 1-39 (316)
168 3pef_A 6-phosphogluconate dehy 94.1 0.04 1.4E-06 50.2 4.3 31 7-39 2-32 (287)
169 3i83_A 2-dehydropantoate 2-red 94.1 0.081 2.8E-06 49.0 6.5 31 6-37 2-32 (320)
170 1y6j_A L-lactate dehydrogenase 94.0 0.19 6.5E-06 46.7 9.1 33 6-39 7-40 (318)
171 2ph5_A Homospermidine synthase 94.0 0.056 1.9E-06 53.2 5.5 100 6-128 13-115 (480)
172 2x4g_A Nucleoside-diphosphate- 94.0 0.087 3E-06 48.4 6.6 31 7-38 14-45 (342)
173 3c1o_A Eugenol synthase; pheny 94.0 0.037 1.3E-06 50.7 4.0 32 6-38 4-36 (321)
174 3slg_A PBGP3 protein; structur 94.0 0.038 1.3E-06 51.7 4.1 38 1-38 19-57 (372)
175 1xgk_A Nitrogen metabolite rep 93.9 0.058 2E-06 50.7 5.3 32 6-38 5-37 (352)
176 3evt_A Phosphoglycerate dehydr 93.9 0.06 2E-06 50.4 5.3 30 7-37 138-167 (324)
177 4gbj_A 6-phosphogluconate dehy 93.8 0.14 4.8E-06 47.1 7.6 32 6-39 5-36 (297)
178 2bma_A Glutamate dehydrogenase 93.8 0.23 8E-06 48.6 9.4 103 7-125 253-365 (470)
179 1t2d_A LDH-P, L-lactate dehydr 93.8 0.092 3.1E-06 49.0 6.4 36 1-39 1-36 (322)
180 3g79_A NDP-N-acetyl-D-galactos 93.8 0.17 5.7E-06 50.0 8.4 32 6-37 18-50 (478)
181 2b69_A UDP-glucuronate decarbo 93.8 0.44 1.5E-05 43.8 11.0 34 4-38 25-59 (343)
182 2pv7_A T-protein [includes: ch 93.7 0.051 1.8E-06 49.9 4.4 30 6-36 21-51 (298)
183 2gas_A Isoflavone reductase; N 93.7 0.033 1.1E-06 50.6 3.0 30 7-37 3-33 (307)
184 3ruf_A WBGU; rossmann fold, UD 93.7 0.098 3.4E-06 48.4 6.3 32 6-38 25-57 (351)
185 1ff9_A Saccharopine reductase; 93.6 0.042 1.4E-06 53.8 3.9 96 6-126 3-98 (450)
186 2raf_A Putative dinucleotide-b 93.6 0.2 7E-06 43.3 7.8 28 6-34 19-46 (209)
187 3d4o_A Dipicolinate synthase s 93.5 0.077 2.6E-06 48.6 5.3 30 7-37 156-185 (293)
188 2x0j_A Malate dehydrogenase; o 93.4 0.18 6.2E-06 46.5 7.5 33 7-39 1-33 (294)
189 3l4b_C TRKA K+ channel protien 93.3 0.04 1.4E-06 48.0 2.7 30 7-37 1-30 (218)
190 2f1k_A Prephenate dehydrogenas 93.2 0.1 3.4E-06 47.0 5.4 30 8-39 2-31 (279)
191 1x0v_A GPD-C, GPDH-C, glycerol 93.0 0.091 3.1E-06 49.1 5.0 25 4-28 6-30 (354)
192 3nep_X Malate dehydrogenase; h 93.0 0.28 9.6E-06 45.6 8.3 32 7-39 1-33 (314)
193 1ez4_A Lactate dehydrogenase; 93.0 0.36 1.2E-05 44.9 8.9 34 6-39 5-38 (318)
194 1ks9_A KPA reductase;, 2-dehyd 92.9 0.33 1.1E-05 43.5 8.4 29 8-37 2-30 (291)
195 2bka_A CC3, TAT-interacting pr 92.9 0.35 1.2E-05 41.9 8.4 31 7-37 19-51 (242)
196 3ldh_A Lactate dehydrogenase; 92.7 0.38 1.3E-05 45.1 8.7 33 6-39 21-54 (330)
197 3ego_A Probable 2-dehydropanto 92.7 0.32 1.1E-05 44.7 8.2 30 6-37 2-31 (307)
198 2v6b_A L-LDH, L-lactate dehydr 92.7 0.5 1.7E-05 43.5 9.5 32 7-39 1-33 (304)
199 1np3_A Ketol-acid reductoisome 92.7 0.046 1.6E-06 51.3 2.3 31 7-39 17-47 (338)
200 1hyh_A L-hicdh, L-2-hydroxyiso 92.6 0.32 1.1E-05 44.7 8.0 32 7-39 2-34 (309)
201 3hg7_A D-isomer specific 2-hyd 92.4 0.12 4.2E-06 48.3 5.0 30 7-37 141-170 (324)
202 2rir_A Dipicolinate synthase, 92.4 0.099 3.4E-06 48.0 4.2 30 7-37 158-187 (300)
203 1lld_A L-lactate dehydrogenase 92.3 0.47 1.6E-05 43.5 8.8 31 6-36 7-38 (319)
204 2c5a_A GDP-mannose-3', 5'-epim 92.2 0.29 9.8E-06 46.0 7.3 32 6-38 29-61 (379)
205 3hwr_A 2-dehydropantoate 2-red 92.1 0.19 6.5E-06 46.5 5.8 31 5-36 18-48 (318)
206 2zcu_A Uncharacterized oxidore 92.0 0.17 5.7E-06 45.2 5.2 31 8-38 1-33 (286)
207 1lss_A TRK system potassium up 92.0 0.16 5.5E-06 40.0 4.6 31 6-37 4-34 (140)
208 1yqg_A Pyrroline-5-carboxylate 92.0 0.096 3.3E-06 46.7 3.5 31 8-39 2-32 (263)
209 4fcc_A Glutamate dehydrogenase 91.9 0.49 1.7E-05 46.1 8.6 102 7-125 236-347 (450)
210 4h7p_A Malate dehydrogenase; s 91.9 0.34 1.2E-05 45.7 7.3 25 5-29 23-48 (345)
211 1yj8_A Glycerol-3-phosphate de 91.9 0.13 4.5E-06 48.6 4.5 23 6-28 21-43 (375)
212 2fp4_A Succinyl-COA ligase [GD 91.7 0.23 7.9E-06 46.0 5.8 87 6-126 13-101 (305)
213 3fwz_A Inner membrane protein 91.4 0.19 6.4E-06 40.5 4.4 33 5-38 6-38 (140)
214 3nzo_A UDP-N-acetylglucosamine 91.4 0.23 7.9E-06 47.4 5.7 32 6-37 35-67 (399)
215 2zqz_A L-LDH, L-lactate dehydr 91.4 0.48 1.6E-05 44.2 7.7 34 6-39 9-42 (326)
216 2csu_A 457AA long hypothetical 91.4 0.58 2E-05 45.7 8.7 86 6-129 8-98 (457)
217 3hn2_A 2-dehydropantoate 2-red 91.3 0.11 3.8E-06 47.9 3.3 31 6-37 2-32 (312)
218 2jl1_A Triphenylmethane reduct 91.3 0.22 7.5E-06 44.5 5.2 31 8-38 2-34 (287)
219 1guz_A Malate dehydrogenase; o 91.3 0.72 2.5E-05 42.5 8.8 30 7-36 1-31 (310)
220 3r3j_A Glutamate dehydrogenase 91.3 0.42 1.5E-05 46.6 7.4 103 7-125 240-352 (456)
221 1a5z_A L-lactate dehydrogenase 91.2 0.68 2.3E-05 42.8 8.6 32 7-39 1-33 (319)
222 1y1p_A ARII, aldehyde reductas 91.2 1.1 3.8E-05 40.7 9.9 32 6-38 11-43 (342)
223 2dpo_A L-gulonate 3-dehydrogen 91.1 0.16 5.3E-06 47.4 4.1 37 1-39 1-37 (319)
224 2yfq_A Padgh, NAD-GDH, NAD-spe 91.1 0.2 6.7E-06 48.6 4.9 33 7-40 213-245 (421)
225 2ew2_A 2-dehydropantoate 2-red 91.1 0.18 6.2E-06 45.8 4.4 31 5-36 2-32 (316)
226 3dfz_A SIRC, precorrin-2 dehyd 91.0 0.24 8.2E-06 43.8 5.0 29 7-36 32-60 (223)
227 1z7e_A Protein aRNA; rossmann 91.0 0.36 1.2E-05 49.1 7.1 34 5-38 314-348 (660)
228 3phh_A Shikimate dehydrogenase 91.0 1.2 4E-05 40.5 9.6 30 7-37 119-148 (269)
229 4f6c_A AUSA reductase domain p 91.0 1.1 3.6E-05 42.8 9.9 33 5-38 68-101 (427)
230 1bgv_A Glutamate dehydrogenase 90.8 0.54 1.8E-05 45.9 7.7 102 7-125 231-343 (449)
231 1id1_A Putative potassium chan 90.5 0.22 7.4E-06 40.6 4.0 33 5-38 2-34 (153)
232 3g17_A Similar to 2-dehydropan 90.5 0.34 1.2E-05 44.1 5.7 23 6-28 2-24 (294)
233 2gn4_A FLAA1 protein, UDP-GLCN 90.5 0.35 1.2E-05 45.0 5.9 32 6-37 21-54 (344)
234 3pqe_A L-LDH, L-lactate dehydr 90.4 0.25 8.6E-06 46.2 4.8 33 6-39 5-38 (326)
235 3p7m_A Malate dehydrogenase; p 90.3 0.38 1.3E-05 44.8 5.9 34 5-39 4-37 (321)
236 4fgw_A Glycerol-3-phosphate de 90.3 0.19 6.6E-06 48.2 3.9 22 6-27 34-55 (391)
237 1vpd_A Tartronate semialdehyde 90.2 0.21 7.1E-06 45.3 4.0 32 6-39 5-36 (299)
238 3two_A Mannitol dehydrogenase; 90.1 0.42 1.4E-05 44.5 6.1 86 7-125 178-263 (348)
239 2ahr_A Putative pyrroline carb 90.1 0.27 9.1E-06 43.7 4.6 32 6-39 3-34 (259)
240 2a35_A Hypothetical protein PA 90.0 0.24 8.2E-06 42.1 4.0 36 1-37 1-38 (215)
241 3ce6_A Adenosylhomocysteinase; 90.0 0.19 6.6E-06 49.7 3.8 29 7-36 275-303 (494)
242 3gvi_A Malate dehydrogenase; N 89.9 0.35 1.2E-05 45.1 5.3 34 5-39 6-39 (324)
243 1oc2_A DTDP-glucose 4,6-dehydr 89.7 0.27 9.3E-06 45.2 4.4 36 1-38 1-38 (348)
244 2q3e_A UDP-glucose 6-dehydroge 89.6 0.22 7.4E-06 48.8 3.8 31 6-36 5-36 (467)
245 3vps_A TUNA, NAD-dependent epi 89.6 0.26 8.7E-06 44.6 4.1 33 5-38 6-39 (321)
246 2rcy_A Pyrroline carboxylate r 89.6 0.21 7.2E-06 44.4 3.4 26 4-29 2-27 (262)
247 3qha_A Putative oxidoreductase 89.5 0.22 7.4E-06 45.6 3.5 32 6-39 15-46 (296)
248 1zej_A HBD-9, 3-hydroxyacyl-CO 89.4 0.81 2.8E-05 42.0 7.3 29 7-37 13-41 (293)
249 4egb_A DTDP-glucose 4,6-dehydr 89.4 0.27 9.2E-06 45.2 4.1 34 5-38 23-58 (346)
250 3cky_A 2-hydroxymethyl glutara 89.4 0.29 9.9E-06 44.4 4.3 35 1-39 1-35 (301)
251 3sc6_A DTDP-4-dehydrorhamnose 89.4 0.26 8.8E-06 44.1 3.8 33 5-38 4-37 (287)
252 2xxj_A L-LDH, L-lactate dehydr 89.3 1.5 5E-05 40.5 9.1 33 7-39 1-33 (310)
253 3doj_A AT3G25530, dehydrogenas 88.9 0.39 1.3E-05 44.1 4.8 33 5-39 20-52 (310)
254 4e12_A Diketoreductase; oxidor 88.7 0.42 1.4E-05 43.3 4.8 32 6-39 4-35 (283)
255 1ur5_A Malate dehydrogenase; o 88.7 0.4 1.4E-05 44.3 4.8 33 6-39 2-34 (309)
256 2wtb_A MFP2, fatty acid multif 88.6 0.49 1.7E-05 49.1 5.7 30 6-36 312-341 (725)
257 3m2p_A UDP-N-acetylglucosamine 88.6 0.4 1.4E-05 43.5 4.6 32 6-38 2-34 (311)
258 4ezb_A Uncharacterized conserv 88.5 0.5 1.7E-05 43.7 5.2 31 6-36 24-54 (317)
259 4e21_A 6-phosphogluconate dehy 88.3 0.39 1.3E-05 45.4 4.4 32 6-39 22-53 (358)
260 2y1e_A 1-deoxy-D-xylulose 5-ph 88.3 0.47 1.6E-05 45.1 4.9 112 6-127 21-135 (398)
261 3l6d_A Putative oxidoreductase 88.1 0.38 1.3E-05 44.1 4.2 32 6-39 9-40 (306)
262 4aj2_A L-lactate dehydrogenase 88.1 0.76 2.6E-05 43.0 6.2 33 6-39 19-52 (331)
263 1q0q_A 1-deoxy-D-xylulose 5-ph 88.1 0.49 1.7E-05 45.2 4.9 113 6-127 9-131 (406)
264 3eag_A UDP-N-acetylmuramate:L- 88.0 1.7 5.8E-05 40.2 8.6 89 6-123 4-93 (326)
265 2o3j_A UDP-glucose 6-dehydroge 87.9 0.36 1.2E-05 47.4 4.1 33 5-37 8-41 (481)
266 3mwd_B ATP-citrate synthase; A 87.7 1.1 3.8E-05 41.9 7.1 97 6-128 10-113 (334)
267 4g2n_A D-isomer specific 2-hyd 87.5 0.53 1.8E-05 44.3 4.8 30 7-37 174-203 (345)
268 2vns_A Metalloreductase steap3 87.5 0.43 1.5E-05 41.4 3.9 30 6-36 28-57 (215)
269 3pp8_A Glyoxylate/hydroxypyruv 87.4 0.46 1.6E-05 44.1 4.3 30 7-37 140-169 (315)
270 1oju_A MDH, malate dehydrogena 87.4 0.49 1.7E-05 43.5 4.4 32 7-39 1-33 (294)
271 1xq6_A Unknown protein; struct 87.2 0.66 2.3E-05 40.1 5.0 34 5-38 3-38 (253)
272 1pzg_A LDH, lactate dehydrogen 87.2 0.5 1.7E-05 44.1 4.4 32 7-39 10-41 (331)
273 3gt0_A Pyrroline-5-carboxylate 87.1 0.43 1.5E-05 42.2 3.7 24 6-29 2-25 (247)
274 4b4o_A Epimerase family protei 87.0 0.56 1.9E-05 42.2 4.5 30 7-37 1-31 (298)
275 1evy_A Glycerol-3-phosphate de 86.9 0.55 1.9E-05 44.0 4.6 29 7-36 16-44 (366)
276 2qyt_A 2-dehydropantoate 2-red 86.8 0.5 1.7E-05 43.0 4.1 27 1-28 4-30 (317)
277 3gg2_A Sugar dehydrogenase, UD 86.8 0.52 1.8E-05 45.9 4.4 29 7-36 3-31 (450)
278 2pi1_A D-lactate dehydrogenase 86.7 0.54 1.8E-05 44.0 4.3 30 7-37 142-171 (334)
279 3h2s_A Putative NADH-flavin re 86.6 0.65 2.2E-05 39.6 4.5 30 8-38 2-32 (224)
280 1gpj_A Glutamyl-tRNA reductase 86.6 0.47 1.6E-05 45.5 4.0 30 7-37 168-198 (404)
281 2uyy_A N-PAC protein; long-cha 86.4 0.59 2E-05 42.8 4.4 32 6-39 30-61 (316)
282 1y7t_A Malate dehydrogenase; N 86.2 0.65 2.2E-05 43.0 4.6 31 6-36 4-41 (327)
283 4dgs_A Dehydrogenase; structur 86.2 0.69 2.4E-05 43.4 4.8 29 7-36 172-200 (340)
284 1f0y_A HCDH, L-3-hydroxyacyl-C 86.2 0.74 2.5E-05 41.9 4.9 32 6-39 15-46 (302)
285 2h78_A Hibadh, 3-hydroxyisobut 86.2 0.55 1.9E-05 42.7 4.0 32 6-39 3-34 (302)
286 2izz_A Pyrroline-5-carboxylate 86.1 0.51 1.7E-05 43.6 3.8 26 4-29 20-45 (322)
287 3aoe_E Glutamate dehydrogenase 86.0 1.7 5.8E-05 42.0 7.5 32 7-39 219-250 (419)
288 3gg9_A D-3-phosphoglycerate de 85.9 0.64 2.2E-05 43.8 4.4 30 7-37 161-190 (352)
289 1xdw_A NAD+-dependent (R)-2-hy 85.8 0.64 2.2E-05 43.4 4.3 30 7-37 147-176 (331)
290 1qp8_A Formate dehydrogenase; 85.8 0.62 2.1E-05 42.9 4.2 30 7-37 125-154 (303)
291 3hdj_A Probable ornithine cycl 85.8 0.19 6.4E-06 46.8 0.6 34 6-40 121-155 (313)
292 1gdh_A D-glycerate dehydrogena 85.7 0.76 2.6E-05 42.7 4.8 30 7-37 147-176 (320)
293 1t2a_A GDP-mannose 4,6 dehydra 85.5 0.72 2.4E-05 42.9 4.6 33 5-38 23-56 (375)
294 4e5n_A Thermostable phosphite 85.5 0.61 2.1E-05 43.5 4.0 30 7-37 146-175 (330)
295 3jtm_A Formate dehydrogenase, 85.4 0.69 2.3E-05 43.7 4.4 30 7-37 165-194 (351)
296 4b8w_A GDP-L-fucose synthase; 85.4 0.63 2.2E-05 41.6 4.0 26 5-30 5-31 (319)
297 2g76_A 3-PGDH, D-3-phosphoglyc 85.4 0.79 2.7E-05 42.9 4.8 30 7-37 166-195 (335)
298 2yq5_A D-isomer specific 2-hyd 85.4 0.69 2.4E-05 43.5 4.3 30 7-37 149-178 (343)
299 1dxy_A D-2-hydroxyisocaproate 85.4 0.69 2.4E-05 43.2 4.3 30 7-37 146-175 (333)
300 1mx3_A CTBP1, C-terminal bindi 85.4 0.79 2.7E-05 43.1 4.8 30 7-37 169-198 (347)
301 1e6u_A GDP-fucose synthetase; 85.4 0.77 2.6E-05 41.5 4.6 32 5-37 2-34 (321)
302 3dtt_A NADP oxidoreductase; st 85.3 0.82 2.8E-05 40.4 4.6 31 5-36 18-48 (245)
303 2w2k_A D-mandelate dehydrogena 85.2 0.82 2.8E-05 42.9 4.8 30 7-37 164-194 (348)
304 2cvz_A Dehydrogenase, 3-hydrox 85.2 0.57 1.9E-05 42.0 3.6 30 7-39 2-31 (289)
305 3gvx_A Glycerate dehydrogenase 85.2 0.59 2E-05 42.9 3.7 30 7-37 123-152 (290)
306 3kb6_A D-lactate dehydrogenase 85.1 0.73 2.5E-05 43.1 4.3 29 7-36 142-170 (334)
307 2gcg_A Glyoxylate reductase/hy 85.0 0.69 2.4E-05 43.1 4.1 30 7-37 156-185 (330)
308 3pid_A UDP-glucose 6-dehydroge 85.0 0.82 2.8E-05 44.4 4.8 29 6-36 36-64 (432)
309 4hy3_A Phosphoglycerate oxidor 85.0 0.78 2.7E-05 43.5 4.5 30 7-37 177-206 (365)
310 3lk7_A UDP-N-acetylmuramoylala 84.9 3.6 0.00012 39.8 9.4 87 6-122 9-98 (451)
311 3sxp_A ADP-L-glycero-D-mannohe 84.8 1 3.5E-05 41.7 5.2 33 6-38 10-44 (362)
312 2cuk_A Glycerate dehydrogenase 84.8 0.79 2.7E-05 42.4 4.4 30 7-37 145-174 (311)
313 1gtm_A Glutamate dehydrogenase 84.7 0.88 3E-05 44.0 4.8 32 7-39 213-245 (419)
314 3ghy_A Ketopantoate reductase 84.6 0.7 2.4E-05 42.8 4.0 30 6-36 3-32 (335)
315 3c7a_A Octopine dehydrogenase; 84.5 0.91 3.1E-05 43.1 4.8 32 6-37 2-33 (404)
316 2dbq_A Glyoxylate reductase; D 84.5 0.82 2.8E-05 42.7 4.4 30 7-37 151-180 (334)
317 2d4a_B Malate dehydrogenase; a 84.5 1.6 5.5E-05 40.2 6.4 22 8-29 1-22 (308)
318 3tl2_A Malate dehydrogenase; c 84.3 1 3.5E-05 41.8 4.9 32 6-39 8-40 (315)
319 3ba1_A HPPR, hydroxyphenylpyru 84.3 0.77 2.6E-05 42.9 4.1 29 7-36 165-193 (333)
320 1wwk_A Phosphoglycerate dehydr 84.3 0.86 2.9E-05 42.0 4.4 30 7-37 143-172 (307)
321 2ewd_A Lactate dehydrogenase,; 84.3 0.88 3E-05 41.9 4.5 36 1-39 1-36 (317)
322 2d0i_A Dehydrogenase; structur 84.2 0.83 2.9E-05 42.6 4.3 29 7-36 147-175 (333)
323 2xdo_A TETX2 protein; tetracyc 84.2 1.1 3.6E-05 42.3 5.2 36 1-37 21-56 (398)
324 2ekl_A D-3-phosphoglycerate de 84.2 0.87 3E-05 42.1 4.4 30 7-37 143-172 (313)
325 2hun_A 336AA long hypothetical 84.1 0.77 2.6E-05 41.8 4.0 31 7-37 4-36 (336)
326 1j4a_A D-LDH, D-lactate dehydr 84.1 0.86 2.9E-05 42.5 4.3 30 7-37 147-176 (333)
327 3oet_A Erythronate-4-phosphate 84.0 0.88 3E-05 43.4 4.4 29 7-36 120-148 (381)
328 2x6t_A ADP-L-glycero-D-manno-h 83.9 0.8 2.7E-05 42.3 4.1 33 6-38 46-79 (357)
329 3dfu_A Uncharacterized protein 83.9 0.38 1.3E-05 42.8 1.7 32 6-38 6-37 (232)
330 2gv8_A Monooxygenase; FMO, FAD 83.6 1.1 3.9E-05 42.9 5.2 37 1-37 1-38 (447)
331 1b8p_A Protein (malate dehydro 83.6 1 3.6E-05 41.8 4.7 34 5-39 4-44 (329)
332 4ej6_A Putative zinc-binding d 83.6 1.6 5.5E-05 40.9 6.1 30 7-37 184-214 (370)
333 3ip1_A Alcohol dehydrogenase, 83.6 2.7 9.4E-05 39.8 7.8 31 7-37 215-245 (404)
334 3kkj_A Amine oxidase, flavin-c 83.5 0.86 2.9E-05 38.4 3.8 31 6-37 2-32 (336)
335 1jay_A Coenzyme F420H2:NADP+ o 83.5 1.3 4.3E-05 37.8 4.9 29 8-37 2-31 (212)
336 1yqd_A Sinapyl alcohol dehydro 83.2 1.1 3.6E-05 42.1 4.6 31 7-38 189-219 (366)
337 3jv7_A ADH-A; dehydrogenase, n 83.2 0.71 2.4E-05 42.8 3.4 32 7-38 173-204 (345)
338 2o4c_A Erythronate-4-phosphate 83.1 0.99 3.4E-05 43.0 4.4 29 7-36 117-145 (380)
339 3au8_A 1-deoxy-D-xylulose 5-ph 82.9 0.95 3.3E-05 43.9 4.1 35 5-39 76-115 (488)
340 3enk_A UDP-glucose 4-epimerase 82.9 1.2 4.1E-05 40.6 4.8 31 6-37 5-36 (341)
341 3c85_A Putative glutathione-re 82.9 0.86 2.9E-05 38.0 3.5 30 7-37 40-70 (183)
342 2iz1_A 6-phosphogluconate dehy 82.7 0.89 3E-05 44.5 4.0 32 6-39 5-36 (474)
343 3pdu_A 3-hydroxyisobutyrate de 82.7 0.62 2.1E-05 42.1 2.7 31 7-39 2-32 (287)
344 2zyd_A 6-phosphogluconate dehy 82.3 0.97 3.3E-05 44.4 4.1 32 4-36 13-44 (480)
345 1sc6_A PGDH, D-3-phosphoglycer 82.3 1.1 3.8E-05 43.1 4.4 29 7-36 146-174 (404)
346 2nac_A NAD-dependent formate d 82.3 1.1 3.7E-05 43.0 4.3 30 7-37 192-221 (393)
347 1pjc_A Protein (L-alanine dehy 82.3 0.85 2.9E-05 42.9 3.5 30 7-37 168-197 (361)
348 4gwg_A 6-phosphogluconate dehy 82.0 0.94 3.2E-05 44.6 3.9 33 5-39 3-35 (484)
349 2ydy_A Methionine adenosyltran 82.0 1.4 4.7E-05 39.7 4.8 30 7-37 3-33 (315)
350 3st7_A Capsular polysaccharide 81.6 0.95 3.2E-05 42.1 3.6 31 7-37 1-32 (369)
351 1n7h_A GDP-D-mannose-4,6-dehyd 81.5 1.3 4.5E-05 41.2 4.6 31 7-38 29-60 (381)
352 1pjq_A CYSG, siroheme synthase 81.4 2.1 7.3E-05 41.6 6.2 93 7-129 13-106 (457)
353 2b5w_A Glucose dehydrogenase; 81.3 2.3 7.7E-05 39.6 6.1 32 7-39 174-208 (357)
354 2c20_A UDP-glucose 4-epimerase 81.3 1.4 4.7E-05 40.0 4.5 31 7-38 2-33 (330)
355 4f6l_B AUSA reductase domain p 81.2 3.4 0.00011 40.3 7.6 32 6-38 150-182 (508)
356 4g65_A TRK system potassium up 81.2 1.2 3.9E-05 43.6 4.2 32 5-37 2-33 (461)
357 4id9_A Short-chain dehydrogena 81.0 1.1 3.9E-05 40.9 3.9 33 5-38 18-51 (347)
358 2bll_A Protein YFBG; decarboxy 80.8 1.5 5.2E-05 39.9 4.7 31 8-38 2-33 (345)
359 1sb8_A WBPP; epimerase, 4-epim 80.4 1.4 4.7E-05 40.5 4.3 32 6-38 27-59 (352)
360 2dq4_A L-threonine 3-dehydroge 80.3 1.3 4.3E-05 41.1 3.9 29 8-37 167-196 (343)
361 4dvj_A Putative zinc-dependent 80.2 1.7 5.7E-05 40.7 4.8 96 7-126 173-269 (363)
362 3k5p_A D-3-phosphoglycerate de 80.2 1.5 5E-05 42.4 4.4 29 7-36 157-185 (416)
363 2j6i_A Formate dehydrogenase; 80.1 1.2 4.3E-05 42.0 3.9 30 7-37 165-195 (364)
364 2q1w_A Putative nucleotide sug 80.0 1.6 5.6E-05 39.8 4.6 33 5-38 20-53 (333)
365 2c29_D Dihydroflavonol 4-reduc 79.9 1.2 4.1E-05 40.6 3.7 35 1-37 1-36 (337)
366 3fpc_A NADP-dependent alcohol 79.9 1.3 4.3E-05 41.2 3.8 30 7-37 168-198 (352)
367 2yy7_A L-threonine dehydrogena 79.8 1 3.5E-05 40.4 3.1 31 7-37 3-35 (312)
368 3ehe_A UDP-glucose 4-epimerase 79.6 1.5 5E-05 39.6 4.1 31 7-39 2-33 (313)
369 2q1s_A Putative nucleotide sug 79.4 1.7 5.7E-05 40.6 4.5 32 6-37 32-64 (377)
370 1orr_A CDP-tyvelose-2-epimeras 79.3 1.6 5.6E-05 39.6 4.4 30 7-37 2-32 (347)
371 3ay3_A NAD-dependent epimerase 79.2 0.91 3.1E-05 40.1 2.5 31 6-37 2-33 (267)
372 3ktd_A Prephenate dehydrogenas 79.1 1.5 5E-05 41.2 4.0 30 6-36 8-37 (341)
373 2gf2_A Hibadh, 3-hydroxyisobut 79.1 1.2 4.1E-05 40.1 3.3 30 8-39 2-31 (296)
374 2d8a_A PH0655, probable L-thre 78.7 1.6 5.5E-05 40.4 4.1 29 8-37 170-199 (348)
375 3uog_A Alcohol dehydrogenase; 78.7 2.3 7.7E-05 39.7 5.2 31 7-38 191-221 (363)
376 4a2c_A Galactitol-1-phosphate 78.6 3 0.0001 38.3 6.0 32 95-126 228-259 (346)
377 3uko_A Alcohol dehydrogenase c 78.5 2.3 7.8E-05 39.9 5.2 31 7-37 195-225 (378)
378 1mv8_A GMD, GDP-mannose 6-dehy 78.5 1.5 5.1E-05 42.3 4.0 28 8-36 2-29 (436)
379 3mw9_A GDH 1, glutamate dehydr 78.5 18 0.00061 35.6 11.5 33 6-39 244-276 (501)
380 3m6i_A L-arabinitol 4-dehydrog 78.5 1.2 4E-05 41.6 3.1 30 7-37 181-211 (363)
381 1uuf_A YAHK, zinc-type alcohol 78.4 1.2 4.2E-05 41.8 3.2 30 7-37 196-225 (369)
382 3ado_A Lambda-crystallin; L-gu 78.3 1.7 5.7E-05 40.4 4.1 37 1-39 1-37 (319)
383 3f8d_A Thioredoxin reductase ( 78.2 2.3 7.8E-05 38.0 4.9 36 2-38 11-46 (323)
384 3mog_A Probable 3-hydroxybutyr 78.1 1.5 5.2E-05 43.0 3.9 32 6-39 5-36 (483)
385 1ek6_A UDP-galactose 4-epimera 77.8 1.8 6.1E-05 39.5 4.1 30 7-37 3-33 (348)
386 1e3j_A NADP(H)-dependent ketos 77.4 4.2 0.00014 37.6 6.6 30 7-37 170-199 (352)
387 2z1m_A GDP-D-mannose dehydrata 76.9 2.2 7.4E-05 38.7 4.4 30 7-37 4-34 (345)
388 3k92_A NAD-GDH, NAD-specific g 76.8 6.9 0.00024 37.7 8.0 34 6-40 221-254 (424)
389 3vtf_A UDP-glucose 6-dehydroge 76.8 2 6.7E-05 41.8 4.2 31 5-36 20-50 (444)
390 3d7l_A LIN1944 protein; APC893 76.3 3 0.0001 34.8 4.9 30 6-37 3-33 (202)
391 2cf5_A Atccad5, CAD, cinnamyl 76.3 1.7 5.7E-05 40.6 3.5 31 7-38 182-212 (357)
392 3oh8_A Nucleoside-diphosphate 76.3 2.2 7.7E-05 41.8 4.6 32 6-38 147-179 (516)
393 3ko8_A NAD-dependent epimerase 76.2 2.3 8E-05 38.0 4.4 29 8-37 2-31 (312)
394 3l9w_A Glutathione-regulated p 76.1 1.8 6.1E-05 41.7 3.7 31 6-37 4-34 (413)
395 3h5n_A MCCB protein; ubiquitin 76.1 6.7 0.00023 36.7 7.6 23 7-29 119-141 (353)
396 1ygy_A PGDH, D-3-phosphoglycer 76.1 2.4 8.3E-05 42.1 4.8 31 7-39 143-173 (529)
397 1kew_A RMLB;, DTDP-D-glucose 4 75.9 2.1 7E-05 39.3 4.0 31 8-38 2-33 (361)
398 1rjw_A ADH-HT, alcohol dehydro 75.9 2.5 8.6E-05 38.9 4.6 30 7-37 166-195 (339)
399 1z82_A Glycerol-3-phosphate de 75.8 2.4 8.2E-05 39.0 4.4 31 5-36 13-43 (335)
400 1dlj_A UDP-glucose dehydrogena 75.6 2.4 8.1E-05 40.5 4.4 27 8-36 2-28 (402)
401 3gqv_A Enoyl reductase; medium 75.5 4.9 0.00017 37.6 6.5 31 7-38 166-197 (371)
402 2y0c_A BCEC, UDP-glucose dehyd 75.3 2.4 8.2E-05 41.5 4.4 30 6-36 8-37 (478)
403 1e3i_A Alcohol dehydrogenase, 75.3 3.7 0.00013 38.4 5.6 30 7-37 197-227 (376)
404 3s2e_A Zinc-containing alcohol 75.1 2 6.7E-05 39.6 3.6 31 7-38 168-198 (340)
405 1rpn_A GDP-mannose 4,6-dehydra 75.1 2.7 9.3E-05 38.0 4.5 32 6-38 14-46 (335)
406 2vou_A 2,6-dihydroxypyridine h 75.0 2.8 9.7E-05 39.2 4.8 35 1-37 1-35 (397)
407 1kyq_A Met8P, siroheme biosynt 74.9 2.2 7.6E-05 38.7 3.8 30 7-37 14-43 (274)
408 3fr7_A Putative ketol-acid red 74.8 1.4 4.6E-05 43.6 2.5 22 7-28 55-76 (525)
409 1p0f_A NADP-dependent alcohol 74.7 3.4 0.00012 38.6 5.2 30 7-37 193-223 (373)
410 1txg_A Glycerol-3-phosphate de 74.7 2.2 7.4E-05 39.0 3.8 29 8-37 2-30 (335)
411 2hrz_A AGR_C_4963P, nucleoside 74.5 2.3 8E-05 38.7 3.9 33 5-37 13-52 (342)
412 2pgd_A 6-phosphogluconate dehy 74.3 2.1 7.2E-05 41.9 3.8 31 7-39 3-33 (482)
413 1rkx_A CDP-glucose-4,6-dehydra 74.2 2.6 8.9E-05 38.7 4.2 31 7-38 10-41 (357)
414 1pl8_A Human sorbitol dehydrog 74.2 2.6 8.8E-05 39.2 4.2 30 7-37 173-203 (356)
415 2ehd_A Oxidoreductase, oxidore 74.1 2.8 9.7E-05 36.0 4.2 35 1-37 1-36 (234)
416 4hb9_A Similarities with proba 74.0 2.8 9.6E-05 38.8 4.4 29 7-36 2-30 (412)
417 3d64_A Adenosylhomocysteinase; 73.9 3.1 0.0001 41.1 4.8 29 7-36 278-306 (494)
418 1i24_A Sulfolipid biosynthesis 73.8 2.8 9.6E-05 39.1 4.4 32 5-37 10-42 (404)
419 3hhp_A Malate dehydrogenase; M 73.8 2.8 9.5E-05 38.7 4.2 30 7-36 1-33 (312)
420 1smk_A Malate dehydrogenase, g 73.6 2.9 0.0001 38.7 4.4 32 5-36 7-40 (326)
421 1vl0_A DTDP-4-dehydrorhamnose 73.5 3.3 0.00011 36.7 4.6 30 7-37 13-43 (292)
422 2jhf_A Alcohol dehydrogenase E 73.4 5.7 0.00019 37.0 6.4 30 7-37 193-223 (374)
423 3rft_A Uronate dehydrogenase; 73.4 2.6 8.9E-05 37.2 3.9 31 5-36 2-33 (267)
424 3obb_A Probable 3-hydroxyisobu 73.3 2.7 9.2E-05 38.5 4.0 32 6-39 3-34 (300)
425 2pzm_A Putative nucleotide sug 73.3 3.6 0.00012 37.4 4.9 31 7-38 21-52 (330)
426 2yjz_A Metalloreductase steap4 75.5 0.71 2.4E-05 39.8 0.0 29 6-35 19-47 (201)
427 1zcj_A Peroxisomal bifunctiona 73.0 3.6 0.00012 40.0 5.0 32 6-39 37-68 (463)
428 3zwc_A Peroxisomal bifunctiona 73.0 4.6 0.00016 41.9 6.0 31 7-39 317-347 (742)
429 2rh8_A Anthocyanidin reductase 72.9 3.2 0.00011 37.7 4.4 30 7-37 10-40 (338)
430 3k5i_A Phosphoribosyl-aminoimi 72.6 2.8 9.7E-05 39.8 4.1 36 1-37 18-54 (403)
431 2gdz_A NAD+-dependent 15-hydro 72.4 4.3 0.00015 35.7 5.1 36 1-37 1-38 (267)
432 2ywl_A Thioredoxin reductase r 72.4 3.6 0.00012 33.7 4.3 30 7-37 2-31 (180)
433 3h8v_A Ubiquitin-like modifier 72.2 2.9 0.0001 38.3 3.9 23 7-29 37-59 (292)
434 2fzw_A Alcohol dehydrogenase c 72.1 4.1 0.00014 37.9 5.1 30 7-37 192-222 (373)
435 1pgj_A 6PGDH, 6-PGDH, 6-phosph 72.1 2.5 8.7E-05 41.3 3.7 31 7-39 2-32 (478)
436 3i6d_A Protoporphyrinogen oxid 72.1 2.9 9.9E-05 39.7 4.1 37 1-38 1-42 (470)
437 1f8f_A Benzyl alcohol dehydrog 71.9 2 6.9E-05 40.1 2.9 30 7-37 192-222 (371)
438 3vku_A L-LDH, L-lactate dehydr 71.7 3.1 0.00011 38.7 4.1 33 6-39 9-42 (326)
439 1eq2_A ADP-L-glycero-D-mannohe 71.5 3.6 0.00012 36.6 4.4 31 8-38 1-32 (310)
440 1cdo_A Alcohol dehydrogenase; 71.5 6.8 0.00023 36.5 6.5 30 7-37 194-224 (374)
441 4hv4_A UDP-N-acetylmuramate--L 71.3 9.6 0.00033 37.2 7.7 84 7-122 23-107 (494)
442 4ea9_A Perosamine N-acetyltran 71.3 4.1 0.00014 35.0 4.5 34 5-39 11-44 (220)
443 1c1d_A L-phenylalanine dehydro 71.3 3.8 0.00013 38.6 4.6 31 7-39 176-206 (355)
444 1z45_A GAL10 bifunctional prot 71.2 3.4 0.00012 42.1 4.6 32 6-38 11-43 (699)
445 2p5y_A UDP-glucose 4-epimerase 71.2 4.2 0.00014 36.4 4.7 29 8-37 2-31 (311)
446 3fbs_A Oxidoreductase; structu 71.0 3.8 0.00013 36.0 4.4 31 6-37 2-32 (297)
447 1piw_A Hypothetical zinc-type 70.9 2.2 7.6E-05 39.7 2.9 30 7-37 181-210 (360)
448 1db3_A GDP-mannose 4,6-dehydra 70.9 3.7 0.00013 37.8 4.4 30 7-37 2-32 (372)
449 2v6g_A Progesterone 5-beta-red 70.8 3.8 0.00013 37.5 4.5 32 7-38 2-38 (364)
450 2pk3_A GDP-6-deoxy-D-LYXO-4-he 70.8 4 0.00014 36.6 4.5 32 6-38 12-44 (321)
451 3aog_A Glutamate dehydrogenase 70.7 4.2 0.00014 39.5 4.8 33 6-39 235-267 (440)
452 2i99_A MU-crystallin homolog; 70.3 3.3 0.00011 38.0 3.9 34 6-39 135-168 (312)
453 2dkn_A 3-alpha-hydroxysteroid 70.3 4.4 0.00015 34.9 4.5 30 7-37 2-32 (255)
454 2dph_A Formaldehyde dismutase; 70.2 4.4 0.00015 38.2 4.9 30 7-37 187-217 (398)
455 3qwb_A Probable quinone oxidor 70.1 3.2 0.00011 38.1 3.7 31 7-38 150-181 (334)
456 3h9u_A Adenosylhomocysteinase; 70.0 3.9 0.00013 39.6 4.4 31 7-39 212-242 (436)
457 2c2x_A Methylenetetrahydrofola 70.0 10 0.00036 34.4 7.0 30 7-36 159-190 (281)
458 1xa0_A Putative NADPH dependen 70.0 6 0.00021 36.0 5.6 31 8-39 152-183 (328)
459 3q2o_A Phosphoribosylaminoimid 69.8 5.1 0.00017 37.6 5.2 31 7-38 15-45 (389)
460 2p4q_A 6-phosphogluconate dehy 69.6 3.2 0.00011 40.9 3.8 33 5-39 9-41 (497)
461 3n58_A Adenosylhomocysteinase; 69.6 4 0.00014 39.7 4.4 29 7-36 248-276 (464)
462 2cdc_A Glucose dehydrogenase g 69.4 2.5 8.5E-05 39.4 2.9 31 7-38 182-212 (366)
463 1v8b_A Adenosylhomocysteinase; 69.2 3.2 0.00011 40.8 3.6 29 7-36 258-286 (479)
464 1vj0_A Alcohol dehydrogenase, 69.2 2.5 8.5E-05 39.8 2.8 31 7-37 197-227 (380)
465 1mld_A Malate dehydrogenase; o 69.1 3.9 0.00013 37.6 4.1 23 7-29 1-24 (314)
466 3krt_A Crotonyl COA reductase; 68.8 4.2 0.00014 39.2 4.4 31 7-38 230-261 (456)
467 4a9w_A Monooxygenase; baeyer-v 68.7 3.9 0.00013 36.9 4.0 32 5-37 2-33 (357)
468 2d5c_A AROE, shikimate 5-dehyd 68.5 3.9 0.00013 36.3 3.9 30 8-39 118-147 (263)
469 1n2s_A DTDP-4-, DTDP-glucose o 68.5 3.9 0.00013 36.3 3.9 28 8-37 2-30 (299)
470 2vn8_A Reticulon-4-interacting 68.5 4.5 0.00015 37.8 4.5 30 7-37 185-215 (375)
471 2tmg_A Protein (glutamate dehy 68.4 5.1 0.00017 38.6 4.8 34 6-39 209-242 (415)
472 3lzw_A Ferredoxin--NADP reduct 68.4 2.6 9E-05 37.8 2.7 32 6-38 7-38 (332)
473 1leh_A Leucine dehydrogenase; 68.4 4.7 0.00016 38.0 4.6 31 7-39 174-204 (364)
474 1o6z_A MDH, malate dehydrogena 68.0 4.8 0.00016 36.8 4.4 30 7-36 1-32 (303)
475 3goh_A Alcohol dehydrogenase, 67.9 3.3 0.00011 37.6 3.3 30 7-37 144-173 (315)
476 3nx4_A Putative oxidoreductase 67.8 4.5 0.00015 36.8 4.2 30 8-38 149-179 (324)
477 3fi9_A Malate dehydrogenase; s 67.5 4.4 0.00015 37.9 4.1 25 5-29 7-32 (343)
478 3d1c_A Flavin-containing putat 67.4 4.9 0.00017 36.7 4.5 33 4-37 2-35 (369)
479 3fbg_A Putative arginate lyase 67.3 3.4 0.00012 38.2 3.3 31 7-38 152-183 (346)
480 3rp8_A Flavoprotein monooxygen 67.1 4.9 0.00017 37.6 4.4 32 5-37 22-53 (407)
481 2zbw_A Thioredoxin reductase; 66.7 5.3 0.00018 36.0 4.5 33 5-38 4-36 (335)
482 1omo_A Alanine dehydrogenase; 66.5 4.4 0.00015 37.4 3.9 34 6-39 125-158 (322)
483 2d1y_A Hypothetical protein TT 66.5 6.9 0.00024 34.2 5.1 36 1-37 1-37 (256)
484 1udb_A Epimerase, UDP-galactos 66.2 5.3 0.00018 36.2 4.4 29 8-37 2-31 (338)
485 3o8q_A Shikimate 5-dehydrogena 66.0 16 0.00053 33.0 7.4 31 7-37 127-157 (281)
486 1r6d_A TDP-glucose-4,6-dehydra 65.9 5.9 0.0002 35.8 4.7 31 8-38 2-38 (337)
487 2eih_A Alcohol dehydrogenase; 65.8 6.2 0.00021 36.3 4.8 31 7-38 168-199 (343)
488 3i3l_A Alkylhalidase CMLS; fla 65.6 5.7 0.00019 39.9 4.8 36 2-38 19-54 (591)
489 3gms_A Putative NADPH:quinone 65.6 3 0.0001 38.4 2.6 31 7-38 146-177 (340)
490 1yvv_A Amine oxidase, flavin-c 65.6 4.6 0.00016 36.4 3.8 31 6-37 2-32 (336)
491 2aef_A Calcium-gated potassium 65.4 3.4 0.00012 35.7 2.8 29 6-36 9-37 (234)
492 1spx_A Short-chain reductase f 65.3 5.8 0.0002 35.0 4.4 36 1-37 1-37 (278)
493 3k6j_A Protein F01G10.3, confi 65.2 5.9 0.0002 38.6 4.7 30 6-36 54-83 (460)
494 4eez_A Alcohol dehydrogenase 1 65.1 5.1 0.00018 36.7 4.1 32 7-38 165-196 (348)
495 3hyw_A Sulfide-quinone reducta 65.0 6.4 0.00022 37.5 4.9 33 7-39 3-36 (430)
496 1rp0_A ARA6, thiazole biosynth 64.9 3.4 0.00012 37.0 2.7 33 6-38 39-71 (284)
497 3gvp_A Adenosylhomocysteinase 64.7 5.8 0.0002 38.4 4.4 31 7-39 221-251 (435)
498 3ihm_A Styrene monooxygenase A 64.7 4.5 0.00015 38.5 3.7 32 6-38 22-53 (430)
499 1yo6_A Putative carbonyl reduc 64.6 6.8 0.00023 33.5 4.6 32 6-37 3-36 (250)
500 2dzd_A Pyruvate carboxylase; b 64.5 3.9 0.00013 39.4 3.2 37 1-38 1-37 (461)
No 1
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=100.00 E-value=1.9e-108 Score=774.69 Aligned_cols=331 Identities=68% Similarity=1.103 Sum_probs=323.8
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEecC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 85 (341)
|+||||||||||||.++|++++++++|+|+|||++.+.++++|||+|||+||+|+ ++|+.+++ +|.+||+.+++++++
T Consensus 1 ~~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~e~ 78 (332)
T 3pym_A 1 MVRVAINGFGRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYA-GEVSHDDK-HIIVDGKKIATYQER 78 (332)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHSTTCEEEEEECTTCCHHHHHHHHHCCTTTCSCS-SCEEECSS-EEEETTEEEEEECCS
T ss_pred CeEEEEECCCcHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhcccCCCCCCC-CcEEEcCC-EEEECCEEEEEEeec
Confidence 3799999999999999999999999999999998889999999999999999999 99999887 999999999999999
Q ss_pred CCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCCCCCeeeeccCccccCCCCcEEeCCCCccceecch
Q 019445 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPELDIVSNASCTTNCLAPL 165 (341)
Q Consensus 86 ~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~d~~~~V~Gvn~~~~~~~~~iIsnp~C~tt~Lapl 165 (341)
+|++++|++.++|+||||||.|+++++++.|+++|+|+|+||+|++|.|++|||+|+++|+++.+||||||||||||+|+
T Consensus 79 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p~vV~gVN~~~~~~~~~IISnasCTTn~Lap~ 158 (332)
T 3pym_A 79 DPANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSSTAPMFVMGVNEEKYTSDLKIVSNASCTTNCLAPL 158 (332)
T ss_dssp SGGGSCTTTTTCSEEEECSSSSCSHHHHHHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHHHH
T ss_pred ccccCCccccCccEEEEecccccCHHHHHHHHHcCCCEEEECCCCCCCCeEeeccchhhcCccccEEecCcchhhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999987789999999999999999
Q ss_pred hHHHhhhcceeEEEEEEEeeccCcceeeeCCCCCCcccccccccccccccCChhHHHHHHhhhhcCceeEEEEEeeeeeE
Q 019445 166 AKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDV 245 (341)
Q Consensus 166 lk~L~~~fgi~~~~ittv~a~s~~~~~~d~~s~~~~~~gr~~~~niiP~~~g~~~~~~~~lpel~~~l~~~~~rVP~~~g 245 (341)
+|+||++|||++++|||+||+|++|+++|++++++||++|++++|+||+++|+++++.+++|||++|++++|+|||+++|
T Consensus 159 lkvL~d~fGI~~g~mTTvha~T~~Q~~vDg~~~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~~~ 238 (332)
T 3pym_A 159 AKVINDAFGIEEGLMTTVHSLTATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTVDV 238 (332)
T ss_dssp HHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCTGGGSCGGGCCEEEECSHHHHHHHHSGGGTTSEEEEEEEESCSSC
T ss_pred HHHHHHhcCeEEEEEEEEeeccccchhccCCCcccCccccchhhcccCCCCChHHHHHHhhhhhcCCEEEEEEEcCCCCc
Confidence 99999999999999999999999999999998889999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEeCCCCCHHHHHHHHHHhhcCcccccccCCCcceeecccCCCcceeEEeCCCcceecCCeEEEEEEeCCCcch
Q 019445 246 SVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGY 325 (341)
Q Consensus 246 ~~~~l~v~l~~~~~~~ei~~~~~~a~~~~~~~il~~~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~gy 325 (341)
|++++++++++++++|||++++++++++||||||+|+|+|+||+||+|++||||||+.+|++++++|+|+++||||||||
T Consensus 239 s~~dlt~~lek~~t~eei~~~lk~a~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~~~~~~~~~vk~~~WYDNE~gy 318 (332)
T 3pym_A 239 SVVDLTVKLNKETTYDEIKKVVKAAAEGKLKGVLGYTEDAVVSSDFLGDSHSSIFDASAGIQLSPKFVKLVSWYDNEYGY 318 (332)
T ss_dssp EEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEEETTEEEEEEEECTTHHH
T ss_pred EeeEEEEEECCcCCHHHHHHHHHHhccCccCceeEEEcCCeEeeccCCCCcceEEccccccccCCCEEEEEEEECCccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHhh
Q 019445 326 SSRVIDLIVHMAK 338 (341)
Q Consensus 326 ~~r~~d~~~~~~~ 338 (341)
||||+||+.||++
T Consensus 319 s~r~~dl~~~~~~ 331 (332)
T 3pym_A 319 STRVVDLVEHVAK 331 (332)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999975
No 2
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=100.00 E-value=2.5e-108 Score=775.23 Aligned_cols=335 Identities=87% Similarity=1.327 Sum_probs=325.4
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCc-eeeecCCcceEECCEEEEEEe
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHN-ELKVKDEKTLLFGEKPVAVFG 83 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~-~v~~~~~~~l~i~g~~i~v~~ 83 (341)
.++||||||||||||.++|++++++++|+|+|||++.+.++++|||+|||+||+|+ + +|+.+++++|.+||+.+++++
T Consensus 2 ~~~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~-~~~v~~~~~~~l~i~Gk~I~v~~ 80 (337)
T 3v1y_O 2 GKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWK-HSDIKIKDSKTLLLGEKPVTVFG 80 (337)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTSCHHHHHHHHHCCTTTCCCC-SSCEEEEETTEEEETTEEEEEEC
T ss_pred CceEEEEECCChHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhhhccCCCccc-CceEEEcCCcEEEECCEEEEEEE
Confidence 35899999999999999999999999999999999889999999999999999999 8 998876547999999999999
Q ss_pred cCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCCCCCeeeeccCccccCCCCcEEeCCCCccceec
Q 019445 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPELDIVSNASCTTNCLA 163 (341)
Q Consensus 84 ~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~d~~~~V~Gvn~~~~~~~~~iIsnp~C~tt~La 163 (341)
+++|++++|++.++|+||||||.|+++++++.|+++|+|+|+||+|++|+|++|||+|+++|+++.+||||||||||||+
T Consensus 81 e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p~vV~gVN~~~~~~~~~IISnasCTTn~La 160 (337)
T 3v1y_O 81 IRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLA 160 (337)
T ss_dssp CSSGGGCCHHHHTCCEEEECSSSCCSHHHHTHHHHTTCCEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHH
T ss_pred ecCcccCCccccCCcEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCeECCCCCHHHcCCCCcEEecCchhhhhHH
Confidence 99999999998899999999999999999999999999999999999999999999999999877899999999999999
Q ss_pred chhHHHhhhcceeEEEEEEEeeccCcceeeeCCCCCCcccccccccccccccCChhHHHHHHhhhhcCceeEEEEEeeee
Q 019445 164 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTV 243 (341)
Q Consensus 164 pllk~L~~~fgi~~~~ittv~a~s~~~~~~d~~s~~~~~~gr~~~~niiP~~~g~~~~~~~~lpel~~~l~~~~~rVP~~ 243 (341)
|++|+||++|||++++|||+||+|++|+++|++++++||++|++++|+||+++|+++++.|++|||++|++++|+|||++
T Consensus 161 p~lkvL~d~fGI~~g~mTTvha~T~~q~~~Dg~~~kd~r~~r~~a~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~ 240 (337)
T 3v1y_O 161 PLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTV 240 (337)
T ss_dssp HHHHHHHHHHCEEEEEEEEEECCCTTSBSSSCCCTTCGGGGSBGGGCCEEEECCHHHHHHHHSGGGTTSEEEEEEECSCS
T ss_pred HHHHHHHHhcCeEEEEEeeeeeccchhhhccCCccccccccccccceeecCCCChHHHHHHhccccCCcEEEEEEEcCCC
Confidence 99999999999999999999999999999999988899999999999999999999999999999999999999999999
Q ss_pred eEeeEEEEEEeCCCCCHHHHHHHHHHhhcCcccccccCCCcceeecccCCCcceeEEeCCCcceecCCeEEEEEEeCCCc
Q 019445 244 DVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEW 323 (341)
Q Consensus 244 ~g~~~~l~v~l~~~~~~~ei~~~~~~a~~~~~~~il~~~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~ 323 (341)
+||++++++++++++++|||++++++++++||+|||+|+|+|+||+||+|++||||||+.+|++++++|+||++||||||
T Consensus 241 ~~s~~dlt~~lek~~t~eei~~~lk~a~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~~~~~~~~~vk~~~WYDNE~ 320 (337)
T 3v1y_O 241 DVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKLVAWYDNEW 320 (337)
T ss_dssp SCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTBTTEEEECSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEEECTTH
T ss_pred CcEEEEEEEEECCCCcHHHHHHHHHHhccCccCCeeEEEcCCEEeeccCCCCcceEEecccCeEECCCEEEEEEEECCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhHHHHHHHHhhcc
Q 019445 324 GYSSRVIDLIVHMAKTQ 340 (341)
Q Consensus 324 gy~~r~~d~~~~~~~~~ 340 (341)
||||||+||+.||++++
T Consensus 321 gys~r~~dl~~~~~~~~ 337 (337)
T 3v1y_O 321 GYSNRVIDLIRHMAKTQ 337 (337)
T ss_dssp HHHHHHHHHHHHHHHCC
T ss_pred chHHHHHHHHHHHhccC
Confidence 99999999999999864
No 3
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=100.00 E-value=5.2e-107 Score=768.70 Aligned_cols=334 Identities=63% Similarity=1.065 Sum_probs=325.4
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEec
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 84 (341)
.|+||||||||||||.++|++.+++ +|+++|||++.+.++++|||+|||+||+|+ ++|+.+++ +|.+||+.+.++++
T Consensus 6 ~~~kvgInGFGRIGrlv~R~~~~~~-veivainDp~~d~~~~a~l~~yDS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~e 82 (346)
T 3h9e_O 6 RELTVGINGFGRIGRLVLRACMEKG-VKVVAVNDPFIDPEYMVYMFKYDSTHGRYK-GSVEFRNG-QLVVDNHEISVYQC 82 (346)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEEECTTCCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEECC
T ss_pred CeeEEEEECCChHHHHHHHHHHhCC-CEEEEEeCCCCChhHhcccccccCCCCCCC-CcEEEcCC-EEEECCEEEEEEec
Confidence 3689999999999999999999987 999999998889999999999999999999 99999888 99999999999999
Q ss_pred CCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCCCCCeeeeccCccccCC-CCcEEeCCCCccceec
Q 019445 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKP-ELDIVSNASCTTNCLA 163 (341)
Q Consensus 85 ~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~d~~~~V~Gvn~~~~~~-~~~iIsnp~C~tt~La 163 (341)
++|++++|++.++|+||||||.|+++++++.|+++|||+|+||+|++|+|++|||+|+++|++ +.+|||||||||+||+
T Consensus 83 ~dp~~i~W~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsaps~d~plvV~gVN~~~~~~~~~~IISNasCTTn~La 162 (346)
T 3h9e_O 83 KEPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSPDAPMFVMGVNENDYNPGSMNIVSNASCTTNCLA 162 (346)
T ss_dssp SSGGGCCGGGGTSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTTCSEEECCCHHHHHHH
T ss_pred CChhhCCcccccccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCeeCcccCHHHcCcccCCEEECCcchhhhHH
Confidence 999999999899999999999999999999999999999999999999999999999999986 6899999999999999
Q ss_pred chhHHHhhhcceeEEEEEEEeeccCcceeeeCCCCCCcccccccccccccccCChhHHHHHHhhhhcCceeEEEEEeeee
Q 019445 164 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTV 243 (341)
Q Consensus 164 pllk~L~~~fgi~~~~ittv~a~s~~~~~~d~~s~~~~~~gr~~~~niiP~~~g~~~~~~~~lpel~~~l~~~~~rVP~~ 243 (341)
|++|+||++|||++++|||+||+|++|+++||+++++||++|++++|+||+++|++++++|++|||++|++++|+|||++
T Consensus 163 p~lkvL~d~fGI~~g~mTTvhA~T~tQ~~~Dg~~~kd~r~~r~aa~NiIP~~tGaakavgkViPeL~gkltg~avRVPv~ 242 (346)
T 3h9e_O 163 PLAKVIHERFGIVEGLMTTVHSYTATQKTVDGPSRKAWRDGRGAHQNIIPASTGAAKAVTKVIPELKGKLTGMAFRVPTP 242 (346)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTSGGGGSBTTTCCEEECCHHHHHHHHHSGGGTTTEEEEEEEESCS
T ss_pred HHHHHHHHHhCeeEEEEeeeeeccCccccccCCCCCCccccccceeeeecccCchHHhhheechhhcCcEEEEEEEcccc
Confidence 99999999999999999999999999999999988899999999999999999999999999999999999999999999
Q ss_pred eEeeEEEEEEeCCCCCHHHHHHHHHHhhcCcccccccCCCcceeecccCCCcceeEEeCCCcceecCCeEEEEEEeCCCc
Q 019445 244 DVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEW 323 (341)
Q Consensus 244 ~g~~~~l~v~l~~~~~~~ei~~~~~~a~~~~~~~il~~~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~ 323 (341)
+||++++++++++++++|||++++++++++||+|||+|+|+|+||+||+|++||||||+.+|++++|+|+|+++||||||
T Consensus 243 ~~s~~dlt~~lek~~t~eei~~~lk~A~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~~~~~~~~~vk~~~WYDNE~ 322 (346)
T 3h9e_O 243 DVSVVDLTCRLAQPAPYSAIKEAVKAAAKGPMAGILAYTEDEVVSTDFLGDTHSSIFDAKAGIALNDNFVKLISWYDNEY 322 (346)
T ss_dssp SCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEEECTTH
T ss_pred cceeEEEEEEECCcCCHHHHHHHHHHhccCccCCceeEEcCCeEeeccCCCCCceeEcccccEEecCCEEEEEEEECCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhHHHHHHHHhhccC
Q 019445 324 GYSSRVIDLIVHMAKTQA 341 (341)
Q Consensus 324 gy~~r~~d~~~~~~~~~~ 341 (341)
||||||+||+.||+++++
T Consensus 323 gys~r~~dl~~~~~~~~~ 340 (346)
T 3h9e_O 323 GYSHRVVDLLRYMFSRDA 340 (346)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred chHHHHHHHHHHHHhhhc
Confidence 999999999999998753
No 4
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=100.00 E-value=2.6e-107 Score=768.54 Aligned_cols=331 Identities=46% Similarity=0.815 Sum_probs=310.2
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEecC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 85 (341)
|+||||||||||||.++|++++++++|+|+|||+ .+.++++|||+|||+||+|+ ++|+.+++ +|.++|+.+++++++
T Consensus 4 ~~kv~INGfGrIGr~v~Ra~~~~~~~~ivaINd~-~d~~~~a~llkyDS~hG~f~-~~v~~~~~-~l~inGk~I~v~~e~ 80 (345)
T 4dib_A 4 MTRVAINGFGRIGRMVFRQAIKESAFEIVAINAS-YPSETLAHLIKYDTVHGKFD-GTVEAFED-HLLVDGKMIRLLNNR 80 (345)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTCSSSEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEECSS-EEEETTEEEEEECCS
T ss_pred cEEEEEECCCcHHHHHHHHHHhCCCceEEEEcCC-CCHHHHHHHhcccCCCCCCC-CcEEEcCC-EEEECCEEEEEeecC
Confidence 5899999999999999999999999999999998 89999999999999999999 99999887 999999999999999
Q ss_pred CCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCC-CCCeeeeccCccccCC-CCcEEeCCCCccceec
Q 019445 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-DAPMFVVGVNEKEYKP-ELDIVSNASCTTNCLA 163 (341)
Q Consensus 86 ~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~-d~~~~V~Gvn~~~~~~-~~~iIsnp~C~tt~La 163 (341)
+|++++|++.++|+||||||.|+++++++.|+++|+|+|+||+|++ |+|++|||+|+++|++ ..+||||||||||||+
T Consensus 81 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~~IISNaSCTTn~La 160 (345)
T 4dib_A 81 DPKELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAPGKNEDVTIVVGVNEDQLDITKHTVISNASCTTNCLA 160 (345)
T ss_dssp CGGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCSEEECCCHHHHHHH
T ss_pred ChhhCCccccCccEEEEeccCcCCHHHHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHcCcccCeEEECCchhhhhhH
Confidence 9999999999999999999999999999999999999999999998 4899999999999986 5799999999999999
Q ss_pred chhHHHhhhcceeEEEEEEEeeccCcceeeeCCCCCCcccccccccccccccCChhHHHHHHhhhhcCceeEEEEEeeee
Q 019445 164 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTV 243 (341)
Q Consensus 164 pllk~L~~~fgi~~~~ittv~a~s~~~~~~d~~s~~~~~~gr~~~~niiP~~~g~~~~~~~~lpel~~~l~~~~~rVP~~ 243 (341)
|++|+||++|||++++|||+||+|++|+++|+++ ++||++|++++|+||+++|+++++++++|||+||++++|+|||++
T Consensus 161 p~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~-kd~r~~r~aa~NIIP~~tGaakav~kVlPeL~gkltg~avRVPv~ 239 (345)
T 4dib_A 161 PVVKVLDEQFGIENGLMTTVHAYTNDQKNIDNPH-KDLRRARACGQSIIPTTTGAAKALAKVLPHLNGKLHGMALRVPTP 239 (345)
T ss_dssp HHHHHHHHHHCEEEEEEEEEECC--------------CCTTSCTTTCCEEECCTHHHHHHHHCGGGTTTEEEEEEECCCS
T ss_pred HHHHHHHHhcCeEEEEEEeeeeccCCceeccccc-cccccchhhhhceecCCCchHHHHhhhccccCCcEEEEEEEccCc
Confidence 9999999999999999999999999999999987 799999999999999999999999999999999999999999999
Q ss_pred eEeeEEEEEEeCCCCCHHHHHHHHHHhhcCcccccccCCCcceeecccCCCcceeEEeCCCcceecCCeEEEEEEeCCCc
Q 019445 244 DVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEW 323 (341)
Q Consensus 244 ~g~~~~l~v~l~~~~~~~ei~~~~~~a~~~~~~~il~~~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~ 323 (341)
+||++++++++++++++|||+++|++++++||+|||+|+|+|+||+||+|++||||||+.+|++++++|+|+++||||||
T Consensus 240 ~~s~~dlt~~lek~~t~eei~~~lk~As~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~vk~~~WYDNE~ 319 (345)
T 4dib_A 240 NVSLVDLVVDVKRDVTVEAINDAFKTVANGALKGIVEFSEEPLVSIDFNTNTHSAIIDGLSTMVMGDRKVKVLAWYDNEW 319 (345)
T ss_dssp SEEEEEEEEEESSCCCHHHHHHHHHHHHTTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEETTTEEEEEEEEETTH
T ss_pred ccEEEEEEEEECCCCCHHHHHHHHHHhhcCcccceeeeEcCcEeeeecCCCCcchhhhhhccEEECCCEEEEEEEECCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhHHHHHHHHhhcc
Q 019445 324 GYSSRVIDLIVHMAKTQ 340 (341)
Q Consensus 324 gy~~r~~d~~~~~~~~~ 340 (341)
||||||+||+.||++++
T Consensus 320 Gys~r~~dl~~~~~~~~ 336 (345)
T 4dib_A 320 GYSRRVVDLVTLVVDEL 336 (345)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhhc
Confidence 99999999999998764
No 5
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=100.00 E-value=1e-106 Score=763.67 Aligned_cols=329 Identities=48% Similarity=0.822 Sum_probs=320.7
Q ss_pred ceeEEEEccCHHHHHHHHHHHcC--CCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEe
Q 019445 6 KIKIGINGFGRIGRLVARVALQR--DDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG 83 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~--p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 83 (341)
++||||||||||||.++|+++++ +++|+|+|||+ .+.++++|||+|||+||+|+ ++|+.+++ +|.+||+.+++++
T Consensus 2 ~~kv~INGfGrIGr~v~Ra~~~~~~~~~~ivaiNd~-~d~~~~a~l~kyDS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~ 78 (335)
T 3doc_A 2 AVRVAINGFGRIGRNILRAIVESGRTDIQVVAINDL-GPVETNAHLLRYDSVHGRFP-KEVEVAGD-TIDVGYGPIKVHA 78 (335)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCSEEEEEEECS-SCHHHHHHHHHEETTTEECS-SCCEECSS-EEESSSSEEEEEC
T ss_pred CEEEEEECCCcHHHHHHHHHHhccCCCeEEEEEeCC-CCHHHHHHHhcccCCCCCCC-CeEEEecC-EEEECCEEEEEEe
Confidence 58999999999999999999987 78999999999 89999999999999999999 99999887 9999999999999
Q ss_pred cCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCCC-CCeeeeccCccccCCCCcEEeCCCCcccee
Q 019445 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKD-APMFVVGVNEKEYKPELDIVSNASCTTNCL 162 (341)
Q Consensus 84 ~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~d-~~~~V~Gvn~~~~~~~~~iIsnp~C~tt~L 162 (341)
+++|++++|++.++|+||||||.|+++++++.|+++|+|+|+||+|+.| +|++|||+|+++|+++.+||||||||||||
T Consensus 79 e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~~p~vV~gVN~~~~~~~~~IISNasCTTn~L 158 (335)
T 3doc_A 79 VRNPAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRVIVSAPADGADLTVVYGVNNDKLTKDHLVISNASCTTNCL 158 (335)
T ss_dssp CSSTTSSCTTTTTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCTTCSEECCTTTTGGGCCTTCCEEECCCHHHHHH
T ss_pred ecccccccccccCCCEEEEccCccCCHHHHHHHHHcCCCEEEECCCCCCCCCEEecccCHHHhCccCCeEecCchhhhhh
Confidence 9999999999999999999999999999999999999999999999987 799999999999987789999999999999
Q ss_pred cchhHHHhhhcceeEEEEEEEeeccCcceeeeCCCCCCcccccccccccccccCChhHHHHHHhhhhcCceeEEEEEeee
Q 019445 163 APLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPT 242 (341)
Q Consensus 163 apllk~L~~~fgi~~~~ittv~a~s~~~~~~d~~s~~~~~~gr~~~~niiP~~~g~~~~~~~~lpel~~~l~~~~~rVP~ 242 (341)
+|++|+||++|||++++|||+||+|++|+++|+++ ++||++|++++|+||+++|+++++.+++|||++|++++|+|||+
T Consensus 159 ap~lk~L~d~fGI~~g~mTTvha~T~~q~~~D~p~-kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv 237 (335)
T 3doc_A 159 APVAQVLNDTIGIEKGFMTTIHSYTGDQPTLDTMH-KDLYRARAAALSMIPTSTGAAKAVGLVLPELKGKLDGVAIRVPT 237 (335)
T ss_dssp HHHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCCC-SSTTTTSCTTSSCEEEECCHHHHHHHHSGGGTTCEEEEEEEESC
T ss_pred HHhHHHHHHHcCEEEEEEEeeeeccchhhhhcCcc-ccccccccCcceEecCCCchHHHHHHhccccCCCEEEEEEEecc
Confidence 99999999999999999999999999999999986 79999999999999999999999999999999999999999999
Q ss_pred eeEeeEEEEEEeCCCCCHHHHHHHHHHhhcCcccccccCCCcceeecccCCCcceeEEeCCCcceecCCeEEEEEEeCCC
Q 019445 243 VDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNE 322 (341)
Q Consensus 243 ~~g~~~~l~v~l~~~~~~~ei~~~~~~a~~~~~~~il~~~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne 322 (341)
++||+.++++++++++++|||++++++++++||||||+|+|+|+||+||+|++||||||+.+|++++++|+|+++|||||
T Consensus 238 ~~~s~~dlt~~lek~~t~eei~~~lk~A~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~vk~~~WYDNE 317 (335)
T 3doc_A 238 PNVSVVDLTFIAKRETTVEEVNNAIREAANGRLKGILGYTDEKLVSHDFNHDSHSSVFHTDQTKVMDGTMVRILSWYDNE 317 (335)
T ss_dssp SSCEEEEEEEEESSCCCHHHHHHHHHHHHTTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEETTTEEEEEEEECTT
T ss_pred ccccceEEEEEECCCCCHHHHHHHHHHhhcCCcCCeeEEEcCCeEeeeeCCCCCccccCchhhEEEcCCEEEEEEEEcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhHHHHHHHHhh
Q 019445 323 WGYSSRVIDLIVHMAK 338 (341)
Q Consensus 323 ~gy~~r~~d~~~~~~~ 338 (341)
|||||||+||+.||++
T Consensus 318 ~gys~r~~dl~~~~~~ 333 (335)
T 3doc_A 318 WGFSSRMSDTAVALGK 333 (335)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHh
Confidence 9999999999999986
No 6
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=100.00 E-value=4.6e-107 Score=770.52 Aligned_cols=333 Identities=58% Similarity=0.977 Sum_probs=322.8
Q ss_pred ceeEEEEccCHHHHHHHHH----HHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeee--------cCCcceE
Q 019445 6 KIKIGINGFGRIGRLVARV----ALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKV--------KDEKTLL 73 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~----l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~--------~~~~~l~ 73 (341)
++||||||||||||.++|+ +++++++|+|+|||+..+.++++|||+|||+||+|+ ++|+. +++ +|.
T Consensus 2 ~~kv~INGFGrIGr~v~Ra~~~~~~~~~~~~vvaINd~~~d~~~~a~llkyDS~hG~f~-~~v~~~~~~~~~~~~~-~l~ 79 (359)
T 3ids_C 2 PIKVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFK-YEVTTTKSSPSVAKDD-TLV 79 (359)
T ss_dssp CEEEEEECTTHHHHHHHHHHHHTTCBTTTEEEEEEECSSCCHHHHHHHHHEETTTEECS-SCEEEECSCTTSSSCC-EEE
T ss_pred ceEEEEECCChHHHHHHHHhHHHHhcCCCcEEEEEecCCCCHHHHHHHhcccCCCCCEe-eEEEecccccccCCCC-EEE
Confidence 5899999999999999999 778889999999997789999999999999999999 99998 665 899
Q ss_pred ECCEEEEEEe-cCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCC-CCCeeeeccCccccCC-CCc
Q 019445 74 FGEKPVAVFG-FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-DAPMFVVGVNEKEYKP-ELD 150 (341)
Q Consensus 74 i~g~~i~v~~-~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~-d~~~~V~Gvn~~~~~~-~~~ 150 (341)
++|+.+++++ +++|++++|++.++|+||||||.|+++++++.|+++|+|+|+||+|++ |+|++|||+|+++|++ ..+
T Consensus 80 inGk~I~v~~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~A~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~~ 159 (359)
T 3ids_C 80 VNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPASGGAKTLVMGVNHHEYNPSEHH 159 (359)
T ss_dssp ETTEEEEECCCCSSTTTSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCCEEEESSCCBSSCEECCTTTTGGGCCTTTCS
T ss_pred ECCEEEEEEEccCCcccCCccccCccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCCeEEeccCHHHcCCCCCC
Confidence 9999999998 899999999988999999999999999999999999999999999998 6999999999999986 689
Q ss_pred EEeCCCCccceecchhHHH-hhhcceeEEEEEEEeeccCcceeeeCCCCCCcccccccccccccccCChhHHHHHHhhhh
Q 019445 151 IVSNASCTTNCLAPLAKVI-HDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPAL 229 (341)
Q Consensus 151 iIsnp~C~tt~Lapllk~L-~~~fgi~~~~ittv~a~s~~~~~~d~~s~~~~~~gr~~~~niiP~~~g~~~~~~~~lpel 229 (341)
||||||||||||+|++|+| |++|||++++|||+||+|++|+++|++++++||++|++++|+||+++|+++++.+++|||
T Consensus 160 IISNaSCTTn~Lap~lkvL~~d~fGI~~g~mTTvha~T~tQ~~vD~~~~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL 239 (359)
T 3ids_C 160 VVSNASCTTNCLAPIVHVLVKEGFGVQTGLMTTIHSYTATQKTVDGVSVKDWRGGRAAAVNIIPSTTGAAKAVGMVIPST 239 (359)
T ss_dssp EEECCCHHHHHHHHHHHHHHHTTCCCSEEEEEEEEECCTTSBSSSCCCTTCTGGGSBGGGCCEEEECSHHHHHHHHSGGG
T ss_pred EEECCchHhhhHHHhhhhhhhccCCeEEEEEeeeeeccchhhhhcCCccccccccccCcceeEccCCchHHHHhhhchhh
Confidence 9999999999999999999 999999999999999999999999999878999999999999999999999999999999
Q ss_pred cCceeEEEEEeeeeeEeeEEEEEEeCCCCCHHHHHHHHHHhhcCcccccccCCCcceeecccCCCcceeEEeCCCcceec
Q 019445 230 NGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALS 309 (341)
Q Consensus 230 ~~~l~~~~~rVP~~~g~~~~l~v~l~~~~~~~ei~~~~~~a~~~~~~~il~~~~~~~vs~d~~~~~~s~~~d~~~~~~~~ 309 (341)
+||++++|+|||+++||++++++++++++++|||++++++++++||+|||+|+|+|+||+||+|++||||||+.+|++++
T Consensus 240 ~gkltg~avRVPv~~vs~~dlt~~lek~~t~eei~~~lk~A~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~t~~~~ 319 (359)
T 3ids_C 240 QGKLTGMSFRVPTPDVSVVDLTFTAARDTSIQEIDAALKRASKTYMKGILGYTDEELVSADFINDNRSSIYDSKATLQNN 319 (359)
T ss_dssp TTSEEEEEEEESCSSCEEEEEEEECSSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCSSEEEEHHHHHHSS
T ss_pred cCceEEEEEEcCCCCcEEEEEEEEECCCCCHHHHHHHHHHhccCccCCceeEecCCEEeeecCCCCcceeEecccceeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ----CCeEEEEEEeCCCcchhhhHHHHHHHHhhcc
Q 019445 310 ----KNFVKLVSWYDNEWGYSSRVIDLIVHMAKTQ 340 (341)
Q Consensus 310 ----~~~~k~~~wydne~gy~~r~~d~~~~~~~~~ 340 (341)
++|+|+++||||||||||||+||+.||++++
T Consensus 320 ~~~~~~~vk~~~WYDNE~Gys~r~vdl~~~~~~~~ 354 (359)
T 3ids_C 320 LPKERRFFKIVSWYDNEWGYSHRVVDLVRHMASKD 354 (359)
T ss_dssp CTTCSSEEEEEEEECTTHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEeEEECCCcchHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999865
No 7
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=100.00 E-value=9.3e-106 Score=757.08 Aligned_cols=331 Identities=45% Similarity=0.733 Sum_probs=320.5
Q ss_pred CCceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEe
Q 019445 4 DKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG 83 (341)
Q Consensus 4 ~~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 83 (341)
.|++||||||||||||.++|++++++++|+|+|||. .+.++++|||+|||+||+|+ ++|+.+++ +|.+||+.+++++
T Consensus 2 ~m~~kv~INGfGrIGr~v~R~~~~~~~~~ivaind~-~d~~~~a~l~kyDS~hG~f~-~~v~~~~~-~l~inGk~I~v~~ 78 (338)
T 3lvf_P 2 SMAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDL-TDDDMLAHLLKYDTMQGRFT-GEVEVVDG-GFRVNGKEVKSFS 78 (338)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECS-SCHHHHHHHHHCCTTTCCCS-SCEEEETT-EEEETTEEEEEEC
T ss_pred CccEEEEEECCCcHHHHHHHHHHHCCCceEEEEecC-CCHHHHHHHhccCCCCCCcC-CeEEEcCC-EEEECCEEEEEEE
Confidence 356899999999999999999999999999999995 89999999999999999999 99999888 9999999999999
Q ss_pred cCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCC-CCCeeeeccCccccCCCCcEEeCCCCcccee
Q 019445 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-DAPMFVVGVNEKEYKPELDIVSNASCTTNCL 162 (341)
Q Consensus 84 ~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~-d~~~~V~Gvn~~~~~~~~~iIsnp~C~tt~L 162 (341)
+++|++++|++.++|+||||||.|+++++++.|+++|||+|+||+|++ |+|++|||+|+++|++..+||||||||||||
T Consensus 79 e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~IISNasCTTn~L 158 (338)
T 3lvf_P 79 EPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSL 158 (338)
T ss_dssp CSCGGGSCTTTTTCSEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCEECCTTTTGGGCCSCCSEEECCCHHHHHH
T ss_pred ecccccCCccccCCCEEEEccCCcCCHHHHHHHHHcCCCEEEECCCCCCCCCEEeccCCHHHcCccCCeEecCchhhhhh
Confidence 999999999999999999999999999999999999999999999998 5999999999999987789999999999999
Q ss_pred cchhHHHhhhcceeEEEEEEEeeccCcceeeeCCCCC-CcccccccccccccccCChhHHHHHHhhhhcCceeEEEEEee
Q 019445 163 APLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMK-DWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVP 241 (341)
Q Consensus 163 apllk~L~~~fgi~~~~ittv~a~s~~~~~~d~~s~~-~~~~gr~~~~niiP~~~g~~~~~~~~lpel~~~l~~~~~rVP 241 (341)
+|++|+||++|||++++|||+||+|++|+++|+++++ +||++|++++|+||+++|+++++.+++|||+||++++|+|||
T Consensus 159 ap~lkvL~d~fGI~~g~mTTvha~T~~q~~~D~~~~k~d~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVP 238 (338)
T 3lvf_P 159 APVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVP 238 (338)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCCTTTTSCGGGCCEEEECSTTTTGGGTCGGGTTSEEEEEEEES
T ss_pred HHHHHHHHHhcCEEEEEEeeeccccchhhhhcCCccccccccchhhhceEEeCCCchHHHHhhhchhhcCcEEEEEEEcC
Confidence 9999999999999999999999999999999999876 999999999999999999999999999999999999999999
Q ss_pred eeeEeeEEEEEEeCC-CCCHHHHHHHHHHhhcCcccccccCCCcceeecccCCCcceeEEeCCCcceec---CCeEEEEE
Q 019445 242 TVDVSVVDLTVRLEK-EATYEEIKNAIKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALS---KNFVKLVS 317 (341)
Q Consensus 242 ~~~g~~~~l~v~l~~-~~~~~ei~~~~~~a~~~~~~~il~~~~~~~vs~d~~~~~~s~~~d~~~~~~~~---~~~~k~~~ 317 (341)
+++||++++++++++ ++++|||+++|++++++| |+|+|+|+||+||+|++||||||+.+|++++ ++|+|+++
T Consensus 239 v~~~s~~dlt~~lek~~~t~eei~~~lk~As~g~----l~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~~~~vk~~~ 314 (338)
T 3lvf_P 239 VATGSLTELTVVLEKQDVTVEQVNEAMKNASNES----FGYTEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAA 314 (338)
T ss_dssp CSSCEEEEEEEEESSSSCCHHHHHHHHHHTCCSS----EEEECSCCCGGGGTTCCCSEEEEGGGCEEEEETTEEEEEEEE
T ss_pred CCceEEEEEEEEEccCCCCHHHHHHHHHHhhcCC----cccccCCEEeEeeCCCCcceEEecccceEecCCCCCEEEEEE
Confidence 999999999999999 999999999999999887 8999999999999999999999999999999 99999999
Q ss_pred EeCCCcchhhhHHHHHHHHhhccC
Q 019445 318 WYDNEWGYSSRVIDLIVHMAKTQA 341 (341)
Q Consensus 318 wydne~gy~~r~~d~~~~~~~~~~ 341 (341)
||||||||||||+||+.||+++-|
T Consensus 315 WYDNE~gys~r~~dl~~~~~~~~~ 338 (338)
T 3lvf_P 315 WYDNEMSYTAQLVRTLAYLAELSK 338 (338)
T ss_dssp EECTTHHHHHHHHHHHHHHHHHTC
T ss_pred EECCccchHHHHHHHHHHHHhhcC
Confidence 999999999999999999998754
No 8
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=100.00 E-value=2.1e-104 Score=751.60 Aligned_cols=329 Identities=49% Similarity=0.843 Sum_probs=318.0
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEec
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 84 (341)
|++||||||||+|||+++|+|+++ ++++|+||+. .+.++++|||+|||+||+|+ ++++.+++ +|.+||+.++++++
T Consensus 20 ~~~kVaInGfGrIGr~vlr~l~e~-~~~ivaIndl-~d~~~~a~llkydS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~~ 95 (356)
T 3hja_A 20 GSMKLAINGFGRIGRNVFKIAFER-GIDIVAINDL-TDPKTLAHLLKYDSTFGVYN-KKVESRDG-AIVVDGREIKIIAE 95 (356)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT-TCEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEEETT-EEEETTEEEEEECC
T ss_pred CCeEEEEECCCHHHHHHHHHHHHC-CCCEEEEeCC-CCHHHhhhhhccccCCCCCC-CCEEEcCC-EEEECCEEEEEEEc
Confidence 358999999999999999999998 7999999998 79999999999999999999 99998887 99999999999999
Q ss_pred CCCCCCCccCCCccEEEecCCCccC----HHHHHHHHh-CCCcEEEecCCCCC-CCeeeeccCccccCCCCcEEeCCCCc
Q 019445 85 RNPEEIPWAKTGAEYVVESTGVFTD----KDKAAAHLK-GGAKKVVISAPSKD-APMFVVGVNEKEYKPELDIVSNASCT 158 (341)
Q Consensus 85 ~~~~~~~w~~~~~DvV~~at~~~~s----~~~~~~~l~-~G~k~V~lSa~~~d-~~~~V~Gvn~~~~~~~~~iIsnp~C~ 158 (341)
++|++++|++.++|+||||||.|++ +++++.|++ +|+|+|+||+|+.| +|++|||+|+++|++..+||||||||
T Consensus 96 ~dp~~i~w~~~gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsaps~d~vp~vV~gVN~~~~~~~~~IISNaSCT 175 (356)
T 3hja_A 96 RDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCT 175 (356)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSCCSSCCEECCTTTSGGGCCTTCCEEECCCHH
T ss_pred CChhhCCccccCCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCCCCCCCCEEeccCCHHHcCcCccEEECCccc
Confidence 9999999998999999999999999 999999999 99999999999986 79999999999998777999999999
Q ss_pred cceecchhHHHhhhcceeEEEEEEEeeccCcceeeeCCCCCCcccccccccccccccCChhHHHHHHhhhhcCceeEEEE
Q 019445 159 TNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSF 238 (341)
Q Consensus 159 tt~Lapllk~L~~~fgi~~~~ittv~a~s~~~~~~d~~s~~~~~~gr~~~~niiP~~~g~~~~~~~~lpel~~~l~~~~~ 238 (341)
||||+|++|+||++|||++++|||+||+|++|+++|+++ ++||++|++++|+||+++|+++++.+++|||++|++++|+
T Consensus 176 Tn~Lap~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~-kd~r~~r~aa~NIIP~~tGaakav~kVlPeL~gkltg~av 254 (356)
T 3hja_A 176 TNCLAPLAKVLHESFGIEQGLMTTVHAYTNDQRILDLPH-SDLRRARAAALSIIPTSTGAAKAVGLVLPELKGKLNGTSM 254 (356)
T ss_dssp HHHHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBTTTSCEEEECCTTTTHHHHCGGGTTTEEEEEE
T ss_pred hhhhhHhHHHHHHhcCeEEEEEEEEEecccccccccCcc-cccccccccccEEEcCCCchHHHHHHhccccCCcEEEEEE
Confidence 999999999999999999999999999999999999987 7999999999999999999999999999999999999999
Q ss_pred EeeeeeEeeEEEEEEe-CCCCCHHHHHHHHHHhhcCc-ccccccCCCcceeecccCCCcceeEEeCCCcceecCCeEEEE
Q 019445 239 RVPTVDVSVVDLTVRL-EKEATYEEIKNAIKEESEGK-LKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLV 316 (341)
Q Consensus 239 rVP~~~g~~~~l~v~l-~~~~~~~ei~~~~~~a~~~~-~~~il~~~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~ 316 (341)
|||+++||++++++++ ++++++|||+++|++++++| |||||+|+|+|+||+||+|++||||||+.+|++++++|+||+
T Consensus 255 RVPv~~~s~~dlt~~l~ek~~t~eeI~~~lk~Aa~g~~lkgil~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~vk~~ 334 (356)
T 3hja_A 255 RVPVPTGSIVDLTVQLKKKDVTKEEINSVLRKASETPELKGILGYTEDPIVSSDIKGNSHSSIVDGLETMVLENGFAKIL 334 (356)
T ss_dssp EESCSSCEEEEEEEEESCTTCCHHHHHHHHHHHHHSTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEECSTTEEEEE
T ss_pred EcCCCccEeEEEEEEEccCCCCHHHHHHHHHHHhcCchhccccceecCCeEeeeccCCCCceEEcCcCCEEEcCCEEEEE
Confidence 9999999999999999 99999999999999999988 999999999999999999999999999999999999999999
Q ss_pred EEeCCCcchhhhHHHHHHHHhh
Q 019445 317 SWYDNEWGYSSRVIDLIVHMAK 338 (341)
Q Consensus 317 ~wydne~gy~~r~~d~~~~~~~ 338 (341)
+||||||||||||+||+.||++
T Consensus 335 ~WYDNE~Gys~r~vdl~~~~~~ 356 (356)
T 3hja_A 335 SWYDNEFGYSTRVVDLAQKLVK 356 (356)
T ss_dssp EEECTTHHHHHHHHHHHHHHC-
T ss_pred EEECCccchHHHHHHHHHHHhC
Confidence 9999999999999999999964
No 9
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=100.00 E-value=4.6e-103 Score=744.09 Aligned_cols=334 Identities=65% Similarity=1.037 Sum_probs=320.3
Q ss_pred CCCceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEE
Q 019445 3 GDKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (341)
Q Consensus 3 ~~~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 82 (341)
+|.++||||||||||||.++|++++||++|||+|||+..+.++++|||+|||+||+|+ ++++.+++ .|.++|+.+.++
T Consensus 8 ~~~~~kv~INGfGrIGr~v~ra~~~~~~~evvaInd~~~~~~~~a~l~~yDS~hg~~~-~~v~~~~~-~l~v~Gk~i~v~ 85 (345)
T 2b4r_O 8 HMAATKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFP-CEVTHADG-FLLIGEKKVSVF 85 (345)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEESSCEEEEE
T ss_pred chhheEEEEeCCchHHHHHHHHHhhCCCcEEEEEcCCCCChHHHHHHhccCCCCCcCC-CCEEEcCC-EEEECCEEEEEE
Confidence 3557899999999999999999999999999999996689999999999999999999 99998877 899999999999
Q ss_pred ecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCCC-CCeeeeccCccccCCCCcEEeCCCCccce
Q 019445 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKD-APMFVVGVNEKEYKPELDIVSNASCTTNC 161 (341)
Q Consensus 83 ~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~d-~~~~V~Gvn~~~~~~~~~iIsnp~C~tt~ 161 (341)
++++|++++|++.++|+||||||.|.++++++.|+++|+|+|+||+|+++ +|++|||+|++.|++..+|||||||||||
T Consensus 86 ~~~dp~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVVIsaps~~dvplvV~gVN~~~~~~~~~IISNasCTTn~ 165 (345)
T 2b4r_O 86 AEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNC 165 (345)
T ss_dssp CCSSGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCCTTCCEEECCCHHHHH
T ss_pred EcCCcccCcccccCCCEEEECcCccccHhhHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHhCCCCCEEECCchHHHH
Confidence 98899999998889999999999999999999999999999999999986 79999999999998667899999999999
Q ss_pred ecchhHHHhhhcceeEEEEEEEeeccCcceeeeCCC--CCCcccccccccccccccCChhHHHHHHhhhhcCceeEEEEE
Q 019445 162 LAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPS--MKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFR 239 (341)
Q Consensus 162 Lapllk~L~~~fgi~~~~ittv~a~s~~~~~~d~~s--~~~~~~gr~~~~niiP~~~g~~~~~~~~lpel~~~l~~~~~r 239 (341)
|+|++|+||++|||++++|||+||+|++|+++|+++ +++||++|++++|+||+++|+++++++++|||+||++++|+|
T Consensus 166 Lap~lk~L~d~fGI~~~~mTTvhA~T~~q~~~d~~~~~~~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avR 245 (345)
T 2b4r_O 166 LAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFR 245 (345)
T ss_dssp HHHHHHHHHHHHCEEEEEEEEEECCCTTSCSSSCCCGGGCCGGGGSCTTTCCEEEECCHHHHHHHHSGGGTTTEEEEEEE
T ss_pred HHHHHHHHHHhcCeeEEEEEEeehhhchhhhhcccccccCCCccccchhhccCcCCCchHHHHHHhhhhcCCcEEEEEEE
Confidence 999999999999999999999999999999999997 479999999999999999999999999999999999999999
Q ss_pred eeeeeEeeEEEEEEeCCCCCHHHHHHHHHHhhcCcccccccCCCcceeecccCCCcceeEEeCCCcceecCCeEEEEEEe
Q 019445 240 VPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWY 319 (341)
Q Consensus 240 VP~~~g~~~~l~v~l~~~~~~~ei~~~~~~a~~~~~~~il~~~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wy 319 (341)
||+++||+.++++++++++++|||+++|++++++||||||+|+|+|+||+||+|++||||||+.+|++++++|+|+++||
T Consensus 246 VPv~~gs~~dltv~lek~~t~eei~~~lk~a~~~~lkgil~y~~~~~VS~d~~~~~~ssi~d~~~~~~~~~~~vk~~~Wy 325 (345)
T 2b4r_O 246 VPIGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWY 325 (345)
T ss_dssp CSCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEEEEEEEEETTEEEEEEEE
T ss_pred ecccceEEEEEEEEECCCCCHHHHHHHHHHhhhcccCCcccccCCCceEEeeCCCCcccccccccCeEecCCEEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcchhhhHHHHHHHHhh
Q 019445 320 DNEWGYSSRVIDLIVHMAK 338 (341)
Q Consensus 320 dne~gy~~r~~d~~~~~~~ 338 (341)
||||||||||+||+.||++
T Consensus 326 DNE~gys~r~~dl~~~~~~ 344 (345)
T 2b4r_O 326 DNEWGYSNRVLDLAVHITT 344 (345)
T ss_dssp CTTHHHHHHHHHHHHHHHC
T ss_pred CCCcchHhHHHHHHHHHhc
Confidence 9999999999999999964
No 10
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=100.00 E-value=2.9e-102 Score=737.58 Aligned_cols=329 Identities=45% Similarity=0.753 Sum_probs=318.3
Q ss_pred ceeEEEEccCHHHHHHHHHHHcC---CCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEE
Q 019445 6 KIKIGINGFGRIGRLVARVALQR---DDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~---p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 82 (341)
|+||||||||+|||.++|+|+++ |++|+|+||+. .+.++++|||+|||+||+|+ ++++.+++ .|.++|+.+.++
T Consensus 1 ~ikVaInGfGrIGr~v~r~l~~~~~~~~~evvaInd~-~~~~~~a~ll~ydS~hg~f~-~~v~~~~~-~l~v~g~~i~v~ 77 (335)
T 1obf_O 1 TIRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDL-GDPKTNAHLTRYDTAHGKFP-GTVSVNGS-YMVVNGDKIRVD 77 (335)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEEETT-EEEETTEEEEEE
T ss_pred CcEEEEECCCHHHHHHHHHHHhcCCCCCcEEEEEeCC-CCHHHHHHHhccCCcCCCCC-CCEEEeCC-EEEECCEEEEEE
Confidence 37999999999999999999998 89999999997 89999999999999999999 99998877 899999999999
Q ss_pred ecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCC-CCC-eeeeccCccccCCCCcEEeCCCCccc
Q 019445 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-DAP-MFVVGVNEKEYKPELDIVSNASCTTN 160 (341)
Q Consensus 83 ~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~-d~~-~~V~Gvn~~~~~~~~~iIsnp~C~tt 160 (341)
++++|++++|++.++|+||||||.|+++++++.|+++|+|+|+||+|+. |+| ++|||+|+++|++..+||||||||||
T Consensus 78 ~~~dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~aGakkVviSaps~~dvp~~vV~gVN~~~~~~~~~IISNasCTTn 157 (335)
T 1obf_O 78 ANRNPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGGADVDATVVYGVNHGTLKSTDTVISNASCTTN 157 (335)
T ss_dssp CCSCGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHHH
T ss_pred EcCCcccCCccccCCCEEEEccCccccHHHHHHHHHcCCCEEEECCcccCCCCceEEccCCHHHhCcCccEEeCCcHHHH
Confidence 9999999999888999999999999999999999999999999999997 688 99999999999866789999999999
Q ss_pred eecchhHHHhhhcceeEEEEEEEeeccCcceeeeCCCCCCcccccccccccccccCChhHHHHHHhhhhcCceeEEEEEe
Q 019445 161 CLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRV 240 (341)
Q Consensus 161 ~Lapllk~L~~~fgi~~~~ittv~a~s~~~~~~d~~s~~~~~~gr~~~~niiP~~~g~~~~~~~~lpel~~~l~~~~~rV 240 (341)
||+|++|+||++|||++++|||+||+|++|+++|+++ ++||++|++++|+||+++|+++++++++|||++|++++|+||
T Consensus 158 ~Lap~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~~~-~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRV 236 (335)
T 1obf_O 158 CLAPLVKPLNDKLGLQDGLMTTVHAYTNNQVLTDVYH-EDLRRARSATMSMIPTKTGAAAAVGDVLPELDGKLNGYAIRV 236 (335)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCCC-SSTTTTSCTTTCCEEEECCHHHHHHHHCGGGTTSEEEEEEEE
T ss_pred HHHHHHHHHHHhcCeeEEEEEEEchhhhhhhhhcccc-cccccccchhhccccCCCcchHhHhhhccccCCceEEEEEEe
Confidence 9999999999999999999999999999999999985 699999999999999999999999999999999999999999
Q ss_pred eeeeEeeEEEEEEeCCCCCHHHHHHHHHHhhcCcccccccCCCcceeecccCCCcceeEEeCCCcceecCCeEEEEEEeC
Q 019445 241 PTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYD 320 (341)
Q Consensus 241 P~~~g~~~~l~v~l~~~~~~~ei~~~~~~a~~~~~~~il~~~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wyd 320 (341)
|+++||+.++++++++++++|||+++|++++++||||||+|+|+|+||+||+|++||||||+.+|++ +++|+|+++|||
T Consensus 237 Pv~~~s~~dl~v~lek~~t~eei~~~lk~a~~~~lkgil~y~~~~~vS~d~~~~~~ssi~d~~~~~~-~~~~vk~~~WyD 315 (335)
T 1obf_O 237 PTINVSIVDLSFVAKRNTTVEEVNGILKAASEGELKGILDYNTEPLVSVDYNHDPASSTVDASLTKV-SGRLVKVSSWYD 315 (335)
T ss_dssp SCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEE-ETTEEEEEEEEC
T ss_pred eccceEEEEEEEEECCCCCHHHHHHHHHHhhhcccCCeecccCCceEeeeeCCCCccceeccccccc-cCCEEEEEEEeC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred CCcchhhhHHHHHHHHhhc
Q 019445 321 NEWGYSSRVIDLIVHMAKT 339 (341)
Q Consensus 321 ne~gy~~r~~d~~~~~~~~ 339 (341)
|||||||||+||+.||+++
T Consensus 316 NE~gys~r~~dl~~~~~~~ 334 (335)
T 1obf_O 316 NEWGFSNRMLDTTVALMSA 334 (335)
T ss_dssp TTHHHHHHHHHHHHHHHHC
T ss_pred CCcchHhHHHHHHHHHhcc
Confidence 9999999999999999764
No 11
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=100.00 E-value=3.4e-102 Score=738.16 Aligned_cols=329 Identities=48% Similarity=0.870 Sum_probs=318.1
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEecC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 85 (341)
++||||||||+|||.++|+|+++|++|+|+||+. .+.++++|||+|||+||+|+ ++++.+++ .|.++|+.+.+++++
T Consensus 2 ~ikV~InGfGrIGr~v~r~l~~~~~~evvaInd~-~~~~~~a~ll~yDs~hG~~~-~~v~~~~~-~l~v~Gk~i~v~~~~ 78 (342)
T 2ep7_A 2 AIKVGINGFGRIGRSFFRASWGREEIEIVAINDL-TDAKHLAHLLKYDSVHGIFK-GSVEAKDD-SIVVDGKEIKVFAQK 78 (342)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTCTTCEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEECSS-EEEETTEEEEEECCS
T ss_pred ceEEEEECCCHHHHHHHHHHHhCCCceEEEEecC-CChHHHhhhhhcccccccCC-CcEEEcCC-EEEECCEEEEEEEcC
Confidence 4799999999999999999999999999999996 79999999999999999999 99998877 899999999999989
Q ss_pred CCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCCCCC-eeeeccCccccCC-CCcEEeCCCCccceec
Q 019445 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAP-MFVVGVNEKEYKP-ELDIVSNASCTTNCLA 163 (341)
Q Consensus 86 ~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~d~~-~~V~Gvn~~~~~~-~~~iIsnp~C~tt~La 163 (341)
+|++++|++.++|+||||||.|+++++++.|+++|+|+|+||+|++|.| ++|||+|++.|++ ..+||||||||||||+
T Consensus 79 dp~~~~w~~~gvDiV~estG~~~s~e~a~~hl~aGakkVvisaps~dvp~~vV~gVN~~~~~~~~~~IISNasCTTn~La 158 (342)
T 2ep7_A 79 DPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAKNPDITVVLGVNEEKYNPKEHNIISNASCTTNCLA 158 (342)
T ss_dssp SGGGCCHHHHTCSEEEECSSSCCBHHHHTTTGGGTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHH
T ss_pred ChhhCCccccCCCEEEECCCchhhhhhhHHHHhcCCCEEEecCCCCCCCceEEcCcCHHHhcccCCeEEECCChHHHHHH
Confidence 9999999888999999999999999999999999999999999999999 9999999999986 5789999999999999
Q ss_pred chhHHHhhhcceeEEEEEEEeeccCcceeeeCCCCCCcccccccccccccccCChhHHHHHHhhhhcCceeEEEEEeeee
Q 019445 164 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTV 243 (341)
Q Consensus 164 pllk~L~~~fgi~~~~ittv~a~s~~~~~~d~~s~~~~~~gr~~~~niiP~~~g~~~~~~~~lpel~~~l~~~~~rVP~~ 243 (341)
|++|+||++|||++++|||+||+|++|+++|+++ ++||++|++++|+||+++|+++++++++|||++|++++|+|||++
T Consensus 159 p~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~p~-~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVPv~ 237 (342)
T 2ep7_A 159 PCVKVLNEAFGVEKGYMVTVHAYTNDQRLLDLPH-KDFRRARAAAINIVPTTTGAAKAIGEVIPELKGKLDGTARRVPVP 237 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBGGGCCEEECCCTTGGGGGTSGGGTTTEEEEEEEESCS
T ss_pred HHHHHHHHHcCeeEEEEEEEeecccchhhhcCCc-chhhhhhhHhhCccCCCCChHHHHHHhhhccCCCEEEEEEEeccc
Confidence 9999999999999999999999999999999985 799999999999999999999999999999999999999999999
Q ss_pred eEeeEEEEEEeCC-CCCHHHHHHHHHHhhcC-------cccccccCCCcceeecccCCCcceeEEeCCCcceecCCeEEE
Q 019445 244 DVSVVDLTVRLEK-EATYEEIKNAIKEESEG-------KLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKL 315 (341)
Q Consensus 244 ~g~~~~l~v~l~~-~~~~~ei~~~~~~a~~~-------~~~~il~~~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~ 315 (341)
+||+.++++++++ ++++|||+++|++++++ ||||||+|+|+|+||+||+|++||||||+.+|+++ ++|+|+
T Consensus 238 ~~s~~dltv~lek~~~t~eei~~~lk~a~~~~~~~~~~~lkgil~y~~~~~vS~d~~~~~~ssi~d~~~~~~~-~~~vk~ 316 (342)
T 2ep7_A 238 DGSLIDLTVVVNKAPSSVEEVNEKFREAAQKYRESGKVYLKEILQYCEDPIVSTDIVGNPHSAIFDAPLTQVI-DNLVHI 316 (342)
T ss_dssp SCEEEEEEEEESSCCSCHHHHHHHHHHHHHHHHTSCCGGGTTSEEEECSCCCGGGGTTCCCSEEEEGGGCEEE-TTEEEE
T ss_pred ceEEEEEEEEEcCCCCCHHHHHHHHHHHhcCCcccccccccccccccCCCeEeeeECCCCccceecccccccc-CCEEEE
Confidence 9999999999999 99999999999999998 99999999999999999999999999999999999 999999
Q ss_pred EEEeCCCcchhhhHHHHHHHHhhc
Q 019445 316 VSWYDNEWGYSSRVIDLIVHMAKT 339 (341)
Q Consensus 316 ~~wydne~gy~~r~~d~~~~~~~~ 339 (341)
++||||||||||||+||+.||+++
T Consensus 317 ~~wyDNE~gys~r~~dl~~~~~~~ 340 (342)
T 2ep7_A 317 AAWYDNEWGYSCRLRDLVIYLAER 340 (342)
T ss_dssp EEEECTTHHHHHHHHHHHHHHHHC
T ss_pred EEEECCCccchhHHHHHHHHHHhc
Confidence 999999999999999999999875
No 12
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=100.00 E-value=3.2e-100 Score=727.36 Aligned_cols=331 Identities=47% Similarity=0.787 Sum_probs=317.8
Q ss_pred ceeEEEEccCHHHHHHHHHHHcC--CCcEEEEeeCCCCChhhhhhhcccccccCcccCceee-ecCCcceEECCEEEEEE
Q 019445 6 KIKIGINGFGRIGRLVARVALQR--DDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELK-VKDEKTLLFGEKPVAVF 82 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~--p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~-~~~~~~l~i~g~~i~v~ 82 (341)
|+||||||||||||+++|+|.+| |++||++|||. .+.++++|||+|||.||+|. +++. .+++ .|.++|+.+.++
T Consensus 1 ~ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~-~~~~~~a~ll~sds~~G~~~-~~v~~~~~~-~l~v~g~~i~v~ 77 (337)
T 1rm4_O 1 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDT-GGVKQASHLLKYDSILGTFD-ADVKTAGDS-AISVDGKVIKVV 77 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECT-TCHHHHHHHHHCCTTTCSCS-SCEEECTTS-EEEETTEEEEEE
T ss_pred CeEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcC-CCHHHHHHHhcccccCCCcc-ceeEEecCC-eEEECCeEEEEE
Confidence 47999999999999999999999 99999999996 89999999999999999999 8887 5555 788999999999
Q ss_pred ecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCCC-CCeeeeccCccccCCCCcEEeCCCCccce
Q 019445 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKD-APMFVVGVNEKEYKPELDIVSNASCTTNC 161 (341)
Q Consensus 83 ~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~d-~~~~V~Gvn~~~~~~~~~iIsnp~C~tt~ 161 (341)
++.+|++++|++.++|+||+|||+|.+++.+++|+++|+|+|++|+|++| .|++|||+|+++|+++++|||||||||||
T Consensus 78 ~~~dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iSap~r~d~p~~V~GVN~~~~~~~~~IIsNasCtTn~ 157 (337)
T 1rm4_O 78 SDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNC 157 (337)
T ss_dssp CCSCGGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCCBCCTTTTGGGCCTTCSEEECCCHHHHH
T ss_pred ecCChhhCcccccCCCEEEECCCchhhHHHHHHHHHcCCEEEEECCcccCCCCeEeecCCHHHhCCCCeEEECCChHHHH
Confidence 99899999997678999999999999999999999999999999999986 79999999999998558999999999999
Q ss_pred ecchhHHHhhhcceeEEEEEEEeeccCcceeeeCCCCCCcccccccccccccccCChhHHHHHHhhhhcCceeEEEEEee
Q 019445 162 LAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVP 241 (341)
Q Consensus 162 Lapllk~L~~~fgi~~~~ittv~a~s~~~~~~d~~s~~~~~~gr~~~~niiP~~~g~~~~~~~~lpel~~~l~~~~~rVP 241 (341)
|+|++|+|+++|||++++|||+||+||+|+++|+++ ++||++|++++|++|+++|+++++.||+|||+|+++++|+|||
T Consensus 158 lap~lk~L~~~fgI~~~~mtTvha~Tgaq~l~d~~~-~~~r~~r~~a~NiiP~~tgaakav~kvlPel~gkl~~~a~RVP 236 (337)
T 1rm4_O 158 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASH-RDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVP 236 (337)
T ss_dssp HHHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCC-SSTTTTSCTTTCCEEECCCHHHHHHHHCGGGTTTEEEEEEEES
T ss_pred HHHHHHHHHHhcCeeEEEEEEEEecCCccchhhcch-hhhccchhhhcCcccccchhhHHHHhhhhhhcCcEEEEEEEec
Confidence 999999999999999999999999999999999986 6999999999999999999999999999999999999999999
Q ss_pred eeeEeeEEEEEEeCCCCCHHHHHHHHHHhhcCcccccccCCCcceeecccCCCcceeEEeCCCcceecCCeEEEEEEeCC
Q 019445 242 TVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDN 321 (341)
Q Consensus 242 ~~~g~~~~l~v~l~~~~~~~ei~~~~~~a~~~~~~~il~~~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydn 321 (341)
++|||++++++++++++++|||+++|++++++||||||+|+|+|+||+||+|++||||||+.+|++++++|+|+++||||
T Consensus 237 ~~~gs~~dl~~~l~k~~t~eei~~~lk~a~~~~lkgil~y~~~~~vs~d~~~~~~s~i~d~~~~~~~~~~~~k~~~wydn 316 (337)
T 1rm4_O 237 TPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDN 316 (337)
T ss_dssp CSSCEEEEEEEEESSCCCHHHHHHHHHHHHTTTTTTTEEEECSCCCGGGGTTCCSSEEEEGGGCEEETTTEEEEEEEECT
T ss_pred CCCEEEEEEEEEECCCCCHHHHHHHHHHHhhCCcCceecCcCCCeeecccCCCCcccccchhccceecCCEEEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchhhhHHHHHHHHhhcc
Q 019445 322 EWGYSSRVIDLIVHMAKTQ 340 (341)
Q Consensus 322 e~gy~~r~~d~~~~~~~~~ 340 (341)
||||||||+|++.||+++.
T Consensus 317 e~gys~r~~d~~~~~~~~~ 335 (337)
T 1rm4_O 317 EWGYSQRVVDLADIVANKW 335 (337)
T ss_dssp THHHHHHHHHHHHHHHHTC
T ss_pred CccchhhHHHHHHHHhhhc
Confidence 9999999999999998763
No 13
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=100.00 E-value=6.1e-100 Score=733.37 Aligned_cols=330 Identities=45% Similarity=0.801 Sum_probs=318.2
Q ss_pred ceeEEEEccCHHHHHHHHHHHcC--CCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEe
Q 019445 6 KIKIGINGFGRIGRLVARVALQR--DDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG 83 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~--p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 83 (341)
|+||||||||||||+++|+|.+| |++||++|++. .+.++++|||+|||+||+|. +++..+++ .|.++|+.+.+++
T Consensus 2 ~ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~-~d~~~~a~ll~yds~~G~~~-~~v~~~~~-~l~v~g~~i~v~~ 78 (380)
T 2d2i_A 2 TIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT-SDARTAAHLLEYDSVLGRFN-ADISYDEN-SITVNGKTMKIVC 78 (380)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECS-SCHHHHHHHHHCCTTTCCCC-SCEEEETT-EEEETTEEEEEEC
T ss_pred CcEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecC-CCHHHHHHhhcccccCCCCC-CcEEEeCC-eEEECCeEEEEEe
Confidence 48999999999999999999999 99999999997 79999999999999999999 99988777 8999999999998
Q ss_pred cCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCCC-CC-eeeeccCccccCC-CCcEEeCCCCccc
Q 019445 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKD-AP-MFVVGVNEKEYKP-ELDIVSNASCTTN 160 (341)
Q Consensus 84 ~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~d-~~-~~V~Gvn~~~~~~-~~~iIsnp~C~tt 160 (341)
+.||++++|++.++|+||+|||+|.+++.+++|+++|+|+|+||+|+.| .| ++|||+|+++|++ .++||||||||||
T Consensus 79 ~~dp~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aGakkVVIs~ps~d~~p~~~V~GVN~e~~~~~~~~IVSNasCtTn 158 (380)
T 2d2i_A 79 DRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKAEGVGTYVIGVNDSEYRHEDFAVISNASCTTN 158 (380)
T ss_dssp CSCGGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHHH
T ss_pred cCChHHCCcccCCCCEEEECCCccccHHHHHHHHHcCCcEEEEcCCCCCCCCceEEcccCHHHhcccCCcEEECCchHHH
Confidence 8899999997679999999999999999999999999999999999886 68 9999999999986 3689999999999
Q ss_pred eecchhHHHhhhcceeEEEEEEEeeccCcceeeeCCCCCCcccccccccccccccCChhHHHHHHhhhhcCceeEEEEEe
Q 019445 161 CLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRV 240 (341)
Q Consensus 161 ~Lapllk~L~~~fgi~~~~ittv~a~s~~~~~~d~~s~~~~~~gr~~~~niiP~~~g~~~~~~~~lpel~~~l~~~~~rV 240 (341)
||+|++|+||++|||++++|||+|++|++|+++|+++ ++||+||++++|++|+++|+++++++++|||+++++++++||
T Consensus 159 ~lap~lk~L~d~fgI~~g~mTTvha~Tg~q~~vD~~~-~d~r~gR~aa~NiIP~~Tgaakav~kvlPeL~gkl~g~avRV 237 (380)
T 2d2i_A 159 CLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASH-RDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRV 237 (380)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCC-SSTTTTSCGGGCCEEEECCHHHHHHHHCGGGTTTEEEEEEEE
T ss_pred HHHHHHHHHHHhcCeeEEEEEEEeeccccchhhccch-hhhhhcchHhhCeEeccCchHHHHHhhhHhhhCcEEEEEEEe
Confidence 9999999999999999999999999999999999997 699999999999999999999999999999999999999999
Q ss_pred eeeeEeeEEEEEEeCCCCCHHHHHHHHHHhhcCcccccccCCCcceeecccCCCcceeEEeCCCcceecCCeEEEEEEeC
Q 019445 241 PTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYD 320 (341)
Q Consensus 241 P~~~g~~~~l~v~l~~~~~~~ei~~~~~~a~~~~~~~il~~~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wyd 320 (341)
|+++||++++++++++++++|||+++|++++++||||||+|+|+|+||+||+|++||||||+.+|++++++|+|+++|||
T Consensus 238 Pt~~gs~~dlt~~l~k~~t~eeI~~~lk~a~~~~lkgil~y~~~~~vS~d~~~~~~ssi~d~~~~~~~~~~~vk~~~wyD 317 (380)
T 2d2i_A 238 PTPNVSVVDLVVQVEKPTITEQVNEVLQKASQTTMKGIIKYSDLPLVSSDFRGTDESSIVDSSLTLVMDGDLVKVIAWYD 317 (380)
T ss_dssp SCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEETTTEEEEEEEEC
T ss_pred ccCCEEEEEEEEEECCcCCHHHHHHHHHHHhhCCCCCccCCcCCCeeeeeeCCCCcceEEecccCceecCCEEEEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchhhhHHHHHHHHhhc
Q 019445 321 NEWGYSSRVIDLIVHMAKT 339 (341)
Q Consensus 321 ne~gy~~r~~d~~~~~~~~ 339 (341)
|||||||||+||+.||+++
T Consensus 318 Ne~gys~r~~d~~~~~~~~ 336 (380)
T 2d2i_A 318 NEWGYSQRVVDLAELAARK 336 (380)
T ss_dssp TTHHHHHHHHHHHHHHHTT
T ss_pred CCcchHhHHHHHHHHHHhh
Confidence 9999999999999999876
No 14
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=100.00 E-value=7.9e-100 Score=724.85 Aligned_cols=329 Identities=66% Similarity=1.060 Sum_probs=317.3
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEecC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 85 (341)
|+||||||||||||+++|+|.+||++||++|++. .+.++++||++|||+||+|. +.++.+++ .|.++|+.+.++++.
T Consensus 1 ~ikVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~-~~~~~~a~l~~~ds~~g~~~-~~v~~~~~-~l~v~g~~i~v~~~~ 77 (330)
T 1gad_O 1 TIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDL-LDADYMAYMLKYDSTHGRFD-GTVEVKDG-HLIVNGKKIRVTAER 77 (330)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECS-SCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEECCS
T ss_pred CeEEEEECcCHHHHHHHHHHHcCCCeEEEEEcCC-CChhHHhHhhcccccCCCCC-CeEEEcCC-EEEECCEEEEEEEcC
Confidence 4799999999999999999999999999999996 78899999999999999999 88887776 899999999999888
Q ss_pred CCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCCC-CCeeeeccCccccCCCCcEEeCCCCccceecc
Q 019445 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKD-APMFVVGVNEKEYKPELDIVSNASCTTNCLAP 164 (341)
Q Consensus 86 ~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~d-~~~~V~Gvn~~~~~~~~~iIsnp~C~tt~Lap 164 (341)
||++++|++.++|+||+|||++.+++.+++|+++|+|+||+|+|+++ .|++|||+|+++|+ +++||||||||||||+|
T Consensus 78 dp~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa~~~~~~p~~V~GvN~~~~~-~~~iIsNpsCtt~~lap 156 (330)
T 1gad_O 78 DPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYA-GQDIVSNASCTTNCLAP 156 (330)
T ss_dssp SGGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCC-SCSEEECCCHHHHHHHH
T ss_pred ChhhCccccccCCEEEECCCccccHHHHHHHHHCCCEEEEECCCCCCCCCeEeecCCHHHhC-CCCEEEcCChHHHHHHH
Confidence 99999997779999999999999999999999999999999999964 79999999999998 78999999999999999
Q ss_pred hhHHHhhhcceeEEEEEEEeeccCcceeeeCCCCCCcccccccccccccccCChhHHHHHHhhhhcCceeEEEEEeeeee
Q 019445 165 LAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVD 244 (341)
Q Consensus 165 llk~L~~~fgi~~~~ittv~a~s~~~~~~d~~s~~~~~~gr~~~~niiP~~~g~~~~~~~~lpel~~~l~~~~~rVP~~~ 244 (341)
++|+|+++|||+++.|||+||+|++|..+|+++++++|++|.+++|++|+++|+++++.|++||++|+++++|+|||++|
T Consensus 157 ~lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~~ 236 (330)
T 1gad_O 157 LAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPN 236 (330)
T ss_dssp HHHHHHHHHCEEEEEEEEEECCCTTSBSSSCCCSSCGGGGSBTTTCCEEEECCTTTTHHHHSGGGTTSEEEEEEECSCSS
T ss_pred HHHHHHHhcCeeEEEEEEEEecccccccccccccCCCccccchhhCeEEcCCCcchhHHHHHHHhcCcEEEEEEEecccc
Confidence 99999999999999999999999999999999777999999999999999999999999999999999999999999999
Q ss_pred EeeEEEEEEeCCCCCHHHHHHHHHHhhcCcccccccCCCcceeecccCCCcceeEEeCCCcceecCCeEEEEEEeCCCcc
Q 019445 245 VSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWG 324 (341)
Q Consensus 245 g~~~~l~v~l~~~~~~~ei~~~~~~a~~~~~~~il~~~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~g 324 (341)
||+++++++++++++.|||+++|+++|++||||||+|+|+|+||+||+|++||||||+.+|++++++|+|+++|||||||
T Consensus 237 g~~~~l~~~l~k~~t~eei~~~~k~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~g 316 (330)
T 1gad_O 237 VSVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETG 316 (330)
T ss_dssp CEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCSSEEEETTTCEEEETTEEEEEEEECTTHH
T ss_pred EEEEEEEEEECCCCCHHHHHHHHHHHhcCCCCCEEeeECCceeeeeECCCCcceEEecccCeEecCCEEEEEEEECCCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHhh
Q 019445 325 YSSRVIDLIVHMAK 338 (341)
Q Consensus 325 y~~r~~d~~~~~~~ 338 (341)
|||||+|++.||++
T Consensus 317 ys~r~~d~~~~~~~ 330 (330)
T 1gad_O 317 YSNKVLDLIAHISK 330 (330)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred hhhHHHHHHHHhcC
Confidence 99999999999863
No 15
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=100.00 E-value=5e-99 Score=722.92 Aligned_cols=333 Identities=64% Similarity=1.044 Sum_probs=315.7
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEec
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 84 (341)
+|+||||||||||||+++|+|.+||++||++|+|+..+.++++|||+||++||+|. ++++.+++ .|.++|+.+.++++
T Consensus 16 ~~ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~-~~v~~~~~-~l~v~g~~i~v~~~ 93 (354)
T 3cps_A 16 FQGTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFN-GTVEVSGK-DLCINGKVVKVFQA 93 (354)
T ss_dssp --CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCS-SCEEECC--CEEETTEEEEEECC
T ss_pred cceEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCC-CcEEEeCC-EEEECCeEEEEEec
Confidence 46899999999999999999999999999999995478899999999999999999 88887776 89999999999988
Q ss_pred CCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCCC-CCeeeeccCccccCCC-CcEEeCCCCcccee
Q 019445 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKD-APMFVVGVNEKEYKPE-LDIVSNASCTTNCL 162 (341)
Q Consensus 85 ~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~d-~~~~V~Gvn~~~~~~~-~~iIsnp~C~tt~L 162 (341)
++|++++|++.++|+||+|||+|.+++.+++|+++|+|+|+||+|+.| .|++|||+|+++|++. ++||||||||||||
T Consensus 94 ~dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~~GakkvVId~padd~~p~~V~GVN~~~~~~~~~~IISNpsCtTn~l 173 (354)
T 3cps_A 94 KDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAPPKDNVPMYVMGVNNTEYDPSKFNVISNASCTTNCL 173 (354)
T ss_dssp SCGGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCSSCCCBCCTTTTGGGCCTTTCSEEECCCHHHHHH
T ss_pred CChHHCCcccCCCCEEEECCCchhhHHHHHHHHHcCCcEEEEeCCCCCCCCEEEeccCHHHhCcCCCcEEECCCcHHHHH
Confidence 899999997679999999999999999999999999999999999886 7999999999999853 79999999999999
Q ss_pred cchhHHHhhhcceeEEEEEEEeeccCcceeeeCCCC--CCcccccccccccccccCChhHHHHHHhhhhcCceeEEEEEe
Q 019445 163 APLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSM--KDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRV 240 (341)
Q Consensus 163 apllk~L~~~fgi~~~~ittv~a~s~~~~~~d~~s~--~~~~~gr~~~~niiP~~~g~~~~~~~~lpel~~~l~~~~~rV 240 (341)
+|++|+|+++|||++++|||+||+|++|+.+|+++. ++||++|.+++|++|+++|+++++.|++|||+++++++++||
T Consensus 174 ap~lkpL~~~~gI~~g~mtTvha~Tg~q~~vd~~~~~~k~~r~~r~aa~NiiP~~tG~akei~kvlp~l~gkl~~~a~rV 253 (354)
T 3cps_A 174 APLAKIINDKFGIVEGLMTTVHSLTANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAAKAVGKVIPALNGKLTGMAIRV 253 (354)
T ss_dssp HHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCCCCC--CCGGGSCTTSCCEEEECCHHHHHHHHSGGGTTTEEEEEEEE
T ss_pred HHHHHHHHHhCCeeEEEEEEEecccccchhhhccchhccccccccchhccEEecCcCHHHHHHHHHHhcCCcEEEEEEEe
Confidence 999999999999999999999999999999999852 689999999999999999999999999999999999999999
Q ss_pred eeeeEeeEEEEEEeCCCCCHHHHHHHHHHhhcCcccccccCCCcceeecccCCCcceeEEeCCCcceecCCeEEEEEEeC
Q 019445 241 PTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYD 320 (341)
Q Consensus 241 P~~~g~~~~l~v~l~~~~~~~ei~~~~~~a~~~~~~~il~~~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wyd 320 (341)
|++|||++++++++++++++|||+++|+++|++||+|||+|+|+|+||+||+|++||||||+.+|++++++|+|+++|||
T Consensus 254 P~~~gs~~dl~~~l~k~~t~eeI~~~~k~a~~~~lkgil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wyd 333 (354)
T 3cps_A 254 PTPDVSVVDLTCKLAKPASIEEIYQAVKEASNGPMKGIMGYTSDDVVSTDFIGCKYSSIFDKNACIALNDSFVKLISWYD 333 (354)
T ss_dssp SCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEEETTEEEEEEEEC
T ss_pred ccCCEEEEEEEEEECCCCCHHHHHHHHHHHhhCCCCCccCccCCCeeeEEEcCCCcceEEecccCeEecCCEEEEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchhhhHHHHHHHHhhc
Q 019445 321 NEWGYSSRVIDLIVHMAKT 339 (341)
Q Consensus 321 ne~gy~~r~~d~~~~~~~~ 339 (341)
|||||||||+||+.||+++
T Consensus 334 ne~gys~r~~d~~~~~~~~ 352 (354)
T 3cps_A 334 NESGYSNRLVDLAVYVASR 352 (354)
T ss_dssp TTHHHHHHHHHHHHHHHHT
T ss_pred CCcchHhHHHHHHHHHHhc
Confidence 9999999999999999764
No 16
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=100.00 E-value=8.7e-99 Score=718.29 Aligned_cols=330 Identities=54% Similarity=0.856 Sum_probs=317.6
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEecC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 85 (341)
|+||||||||||||+++|+|.+||++||++|++. .+.++++|||+||++||+|. ++++.+++ .|.++|+.+.+++++
T Consensus 1 mikVgI~G~G~iGr~l~R~l~~~~~veivain~~-~~~~~~~~ll~~ds~~G~~~-~~v~~~~~-~l~v~g~~i~v~~~~ 77 (334)
T 3cmc_O 1 AVKVGINGFGRIGRNVFRAALKNPDIEVVAVNDL-TDANTLAHLLKYDSVHGRLD-AEVSVNGN-NLVVNGKEIIVKAER 77 (334)
T ss_dssp CEEEEEESCSHHHHHHHHHHTTCTTEEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEEETT-EEEETTEEEEEECCS
T ss_pred CeEEEEECCCHHHHHHHHHHhCCCCeEEEEEeCC-CCHHHHHHHhccCCcCCCcC-ceEEEccC-cEEECCEEEEEEecC
Confidence 4799999999999999999999999999999996 78999999999999999999 89988777 899999999998888
Q ss_pred CCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCCC-CCeeeeccCccccCC-CCcEEeCCCCccceec
Q 019445 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKD-APMFVVGVNEKEYKP-ELDIVSNASCTTNCLA 163 (341)
Q Consensus 86 ~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~d-~~~~V~Gvn~~~~~~-~~~iIsnp~C~tt~La 163 (341)
+|++++|++.++|+||+|||+|.+++.+++|+++|+|+++||+|+.| .|++|||+|+++|++ .++||||||||||||+
T Consensus 78 dp~~i~w~~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVId~pa~d~~p~~V~eVN~~~i~~~~~~IIsNpsCttn~la 157 (334)
T 3cmc_O 78 DPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLA 157 (334)
T ss_dssp SGGGCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHH
T ss_pred ChhhcCcccCccCEEEECCCchhhHHHHHHHHHCCCCEEEEeCCCccCCCEeccccCHHHhCccCCeEEECCChHHHHHH
Confidence 99999998789999999999999999999999999999999999886 799999999999985 3789999999999999
Q ss_pred chhHHHhhhcceeEEEEEEEeeccCcceeeeCCCCCCcccccccccccccccCChhHHHHHHhhhhcCceeEEEEEeeee
Q 019445 164 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTV 243 (341)
Q Consensus 164 pllk~L~~~fgi~~~~ittv~a~s~~~~~~d~~s~~~~~~gr~~~~niiP~~~g~~~~~~~~lpel~~~l~~~~~rVP~~ 243 (341)
|++|+|+++|||++++|||+||+||+|+++|+++ +++|++|.+++|++|+++|+++|+.|++|+|+++++++|+|||++
T Consensus 158 p~lkpL~~~~gI~~~~mtTvha~Sg~q~~~d~~~-~~~r~~r~~a~NiiP~~tg~a~ei~kvlp~l~gkl~~~a~rVP~~ 236 (334)
T 3cmc_O 158 PFAKVLHEQFGIVRGMMTTVHSYTNDQRILDLPH-KDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTP 236 (334)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBTTTCCEEEECSHHHHHHHHCGGGTTTEEEEEEEESCS
T ss_pred HHHHHHHHhcCceeeeEEEEEeccchhhhccccc-cccccchhhhhCEEeeccCcccchhhhChhhcCcEEEEEEEECCC
Confidence 9999999999999999999999999999999986 699999999999999999999999999999999999999999999
Q ss_pred eEeeEEEEEEeCCCCCHHHHHHHHHHhhcCcccccccCCCcceeecccCCCcceeEEeCCCcceecCCeEEEEEEeCCCc
Q 019445 244 DVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEW 323 (341)
Q Consensus 244 ~g~~~~l~v~l~~~~~~~ei~~~~~~a~~~~~~~il~~~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~ 323 (341)
|||++++|+++++++++|||+++|+++|++||+|||+|+|+|+||+||+|++||||||+.+|++++++|+|+++||||||
T Consensus 237 ~gs~~~l~~~l~k~~t~eei~~~lk~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~ 316 (334)
T 3cmc_O 237 NVSVVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYSEEPLVSRDYNGSTVSSTIDALSTMVIDGKMVKVVSWYDNET 316 (334)
T ss_dssp SCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCSSEEEEGGGCEEETTTEEEEEEEECTTH
T ss_pred CEEEEEEEEEECCCCCHHHHHHHHHHHhhCccCCcccCCCCCEeeeeeCCCCccceeccccCeEecCCEEEEEEEeCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhHHHHHHHHhhc
Q 019445 324 GYSSRVIDLIVHMAKT 339 (341)
Q Consensus 324 gy~~r~~d~~~~~~~~ 339 (341)
||||||+|++.||+++
T Consensus 317 gys~r~~d~~~~~~~~ 332 (334)
T 3cmc_O 317 GYSHRVVDLAAYIASK 332 (334)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred hhhhHHHHHHHHHHhc
Confidence 9999999999999875
No 17
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=100.00 E-value=2.4e-98 Score=716.57 Aligned_cols=331 Identities=44% Similarity=0.797 Sum_probs=318.6
Q ss_pred ceeEEEEccCHHHHHHHHHHHcC--CCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEe
Q 019445 6 KIKIGINGFGRIGRLVARVALQR--DDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG 83 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~--p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 83 (341)
|+||||||||||||+++|+|.+| |++|+++|++. .+.++++|||+|||+||+|. +++..+++ .|.++|+.+.+++
T Consensus 2 ~ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~-~~~~~~~~l~~~ds~~G~~~-~~v~~~~~-~l~v~g~~i~v~~ 78 (339)
T 3b1j_A 2 TIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT-SDARTAAHLLEYDSVLGRFN-ADISYDEN-SITVNGKTMKIVC 78 (339)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECS-SCHHHHHHHHHCCTTTCCCC-SCEEEETT-EEEETTEEEEEEC
T ss_pred ceEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecC-CCHHHHHHHhccccccCCCC-CcEEEcCC-eeeecCceEEEEe
Confidence 48999999999999999999999 99999999997 79999999999999999999 99988777 8999999999998
Q ss_pred cCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCCC-CC-eeeeccCccccCC-CCcEEeCCCCccc
Q 019445 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKD-AP-MFVVGVNEKEYKP-ELDIVSNASCTTN 160 (341)
Q Consensus 84 ~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~d-~~-~~V~Gvn~~~~~~-~~~iIsnp~C~tt 160 (341)
+.||++++|++.++|+||+|||++.+++.+++|+++|+|+|+||+|+.+ .| ++|||+|+++|++ .++||||||||||
T Consensus 79 ~~dp~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~~~~~~p~~~V~gVN~~~~~~~~~~IISnasCtTn 158 (339)
T 3b1j_A 79 DRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKGEGVGTYVIGVNDSEYRHEDFAVISNASCTTN 158 (339)
T ss_dssp CSCGGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHHH
T ss_pred cCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCcEEEEeCCCCCCCCeeEEcccCHHHhCcCCCeEEECCcchhh
Confidence 8899999998779999999999999999999999999999999999886 68 9999999999986 3789999999999
Q ss_pred eecchhHHHhhhcceeEEEEEEEeeccCcceeeeCCCCCCcccccccccccccccCChhHHHHHHhhhhcCceeEEEEEe
Q 019445 161 CLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRV 240 (341)
Q Consensus 161 ~Lapllk~L~~~fgi~~~~ittv~a~s~~~~~~d~~s~~~~~~gr~~~~niiP~~~g~~~~~~~~lpel~~~l~~~~~rV 240 (341)
||+|++|+||++|||++++|||+|++|++|+++|+++ ++||+||++++|++|+++|+++++++++|||+++++++++||
T Consensus 159 ~lap~lk~L~~~fgI~~~~~tTvha~Tg~q~~vd~~~-~d~r~~r~a~~NiiP~~tgaakav~kVlpeL~gkl~g~a~rV 237 (339)
T 3b1j_A 159 CLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASH-RDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRV 237 (339)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCCC-SSTTTTSCTTSCCEEEECSHHHHHHHHCGGGTTTEEEEEEEE
T ss_pred HHHHHHHHHHHhCCeeEEEEEEEEeecCCchhcccch-hhhhccccHHHceEcccCchHHHHHHHhHhhcCcEEEEEEEe
Confidence 9999999999999999999999999999999999987 599999999999999999999999999999999999999999
Q ss_pred eeeeEeeEEEEEEeCCCCCHHHHHHHHHHhhcCcccccccCCCcceeecccCCCcceeEEeCCCcceecCCeEEEEEEeC
Q 019445 241 PTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYD 320 (341)
Q Consensus 241 P~~~g~~~~l~v~l~~~~~~~ei~~~~~~a~~~~~~~il~~~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wyd 320 (341)
|+++||++++++++++++++|||+++|++++++||+||++|+|+|+||+||+|++|||+||+.+|++++++|+|+++|||
T Consensus 238 P~~~g~~~dl~v~l~k~~t~eeI~~~lk~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wyd 317 (339)
T 3b1j_A 238 PTPNVSVVDLVVQVEKPTITEQVNEVLQKASQTTMKGIIKYSDLPLVSSDFRGTDESSIVDSSLTLVMDGDLVKVIAWYD 317 (339)
T ss_dssp SCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHSTTBTTEEEECSCCCGGGGTTCCSSEEEEGGGCEEETTTEEEEEEEEC
T ss_pred ccCCEEEEEEEEEEcCcCCHHHHHHHHHHhhcCCCCCccCccCCceeehhcCCCCCceEEecccCceecCCEEEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchhhhHHHHHHHHhhcc
Q 019445 321 NEWGYSSRVIDLIVHMAKTQ 340 (341)
Q Consensus 321 ne~gy~~r~~d~~~~~~~~~ 340 (341)
|||||||||+||+.||+++.
T Consensus 318 ne~gys~r~~d~~~~~~~~~ 337 (339)
T 3b1j_A 318 NEWGYSQRVVDLAELAARKW 337 (339)
T ss_dssp TTHHHHHHHHHHHHHHHHTC
T ss_pred CCcchHhHHHHHHHHHhhhc
Confidence 99999999999999998763
No 18
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=100.00 E-value=3.8e-98 Score=715.59 Aligned_cols=334 Identities=86% Similarity=1.325 Sum_probs=316.2
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeee-cCCcceEECCEEEEEEe
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKV-KDEKTLLFGEKPVAVFG 83 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~-~~~~~l~i~g~~i~v~~ 83 (341)
||+||||||||||||+++|+|.+||++||++|+|+..+.++++|+|+|||+||+|.++.++. +++ .|.++|+.+.+++
T Consensus 2 m~ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~-~l~~~g~~i~v~~ 80 (337)
T 3e5r_O 2 GKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSK-TLLLGEKPVTVFG 80 (337)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSS-EEEETTEEEEEEC
T ss_pred CceEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCC-eeEECCeEEEEEe
Confidence 45899999999999999999999999999999995478899999999999999985124444 455 7889999998888
Q ss_pred cCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCCCCCeeeeccCccccCCCCcEEeCCCCccceec
Q 019445 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPELDIVSNASCTTNCLA 163 (341)
Q Consensus 84 ~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~d~~~~V~Gvn~~~~~~~~~iIsnp~C~tt~La 163 (341)
++||++++|++.++|+||+|||++.+++.+++|+++|+|+|+||+|++|.|++|||+|+++|++++++|||||||||||+
T Consensus 81 ~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~pa~d~p~~V~gvN~~~~~~~~~iIsnpsCtt~~la 160 (337)
T 3e5r_O 81 IRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLA 160 (337)
T ss_dssp CSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHH
T ss_pred cCChHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEEEEecCCCCCCEEEeccCHHHhCCCCcEEECCChHHHHHH
Confidence 88999999977799999999999999999999999999999999999889999999999999855899999999999999
Q ss_pred chhHHHhhhcceeEEEEEEEeeccCcceeeeCCCCCCcccccccccccccccCChhHHHHHHhhhhcCceeEEEEEeeee
Q 019445 164 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTV 243 (341)
Q Consensus 164 pllk~L~~~fgi~~~~ittv~a~s~~~~~~d~~s~~~~~~gr~~~~niiP~~~g~~~~~~~~lpel~~~l~~~~~rVP~~ 243 (341)
|++|+|+++|||++++|||+||+|++|.++|+++.++||++|.+++|++|+++|+++++.|++||++++++++++|||++
T Consensus 161 ~~lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~ 240 (337)
T 3e5r_O 161 PLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTV 240 (337)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCSGGGSBGGGSCEEEECCHHHHHHHHSGGGTTTEEEEEEEESCS
T ss_pred HHHHHHHHhcCccccceeEEEeeccccccccccccccccccccHhhCccccCCCchHHHHHHHHHhCCcEEEEEEEeccC
Confidence 99999999999999999999999999999999876799999999999999999999999999999999999999999999
Q ss_pred eEeeEEEEEEeCCCCCHHHHHHHHHHhhcCcccccccCCCcceeecccCCCcceeEEeCCCcceecCCeEEEEEEeCCCc
Q 019445 244 DVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEW 323 (341)
Q Consensus 244 ~g~~~~l~v~l~~~~~~~ei~~~~~~a~~~~~~~il~~~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~ 323 (341)
|||++++++++++++++|||+++|+++|++||+|||+|+|+|+||+||+|++||||||+.+|++++++|+|+++||||||
T Consensus 241 ~g~~~~l~~~l~k~~t~eei~~~~~~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~ 320 (337)
T 3e5r_O 241 DVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKLVAWYDNEW 320 (337)
T ss_dssp SCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEEECTTH
T ss_pred CeEEEEEEEEECCCccHHHHHHHHHHHhhCCCCCcccCCCCCeeeeeecCCCCceEEecccCcEecCCEEEEEEEeCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhHHHHHHHHhhc
Q 019445 324 GYSSRVIDLIVHMAKT 339 (341)
Q Consensus 324 gy~~r~~d~~~~~~~~ 339 (341)
||||||+|++.||+++
T Consensus 321 gys~r~~~~~~~~~~~ 336 (337)
T 3e5r_O 321 GYSNRVIDLIRHMAKT 336 (337)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred chHhHHHHHHHHHhcc
Confidence 9999999999999765
No 19
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=100.00 E-value=1.5e-98 Score=714.78 Aligned_cols=327 Identities=50% Similarity=0.820 Sum_probs=315.0
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEecCC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRN 86 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 86 (341)
+||||||||||||+++|+|++| ++|+++||+. .+.++++|||+|||+||+|. +++..+++ .|.++|+.+.++++++
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~-~~evvaind~-~~~~~~a~ll~~ds~~G~~~-~~v~~~~~-~l~v~g~~i~v~~~~d 76 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSR-GVEVALINDL-TDNKTLAHLLKYDSIYHRFP-GEVAYDDQ-YLYVDGKAIRATAVKD 76 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEECS-SCHHHHHHHHHCCTTTCSCS-SCEEECSS-EEEETTEEEEEECCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCEEEEEecC-CCHHHHhHhhhccccCCCCC-ceEEEcCC-EEEECCEEEEEEecCC
Confidence 4899999999999999999999 8999999996 89999999999999999999 99988776 8999999999998889
Q ss_pred CCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCCC-CCeeeeccCccccCC-CCcEEeCCCCccceecc
Q 019445 87 PEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKD-APMFVVGVNEKEYKP-ELDIVSNASCTTNCLAP 164 (341)
Q Consensus 87 ~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~d-~~~~V~Gvn~~~~~~-~~~iIsnp~C~tt~Lap 164 (341)
|++++|++.++|+||+|||+|.+++.+++|+++|+|+|+||+|+.| .|++|||+|+++|++ .++||||||||||||+|
T Consensus 77 p~~l~w~~~gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps~d~~p~vV~gVN~~~~~~~~~~IIsnasCtTn~lap 156 (331)
T 2g82_O 77 PKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKGEDITIVMGVNHEAYDPSRHHIISNASCTTNSLAP 156 (331)
T ss_dssp GGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCCEEECCCHHHHHHHH
T ss_pred hhhCcccccCCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCCcCCCCEEeeccCHHHhCcCCCCEEECCChHHHHHHH
Confidence 9999998789999999999999999999999999999999999987 799999999999985 37899999999999999
Q ss_pred hhHHHhhhcceeEEEEEEEeeccCcceeeeCCCCCCcccccccccccccccCChhHHHHHHhhhhcCceeEEEEEeeeee
Q 019445 165 LAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVD 244 (341)
Q Consensus 165 llk~L~~~fgi~~~~ittv~a~s~~~~~~d~~s~~~~~~gr~~~~niiP~~~g~~~~~~~~lpel~~~l~~~~~rVP~~~ 244 (341)
++|+||++|||++++|||+||+||+|+++|+++ ++||++|++++|++|+++|+++++.+++|||+++++++|+|||+++
T Consensus 157 ~lk~L~~~fgI~~~~mtTvha~Tg~q~~~d~~~-~d~r~~r~~a~NiIP~~tGaakav~kIlp~L~gkl~g~a~RVPv~~ 235 (331)
T 2g82_O 157 VMKVLEEAFGVEKALMTTVHSYTNDQRLLDLPH-KDLRRARAAAINIIPTTTGAAKATALVLPSLKGRFDGMALRVPTAT 235 (331)
T ss_dssp HHHHHHHHTCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBGGGCCEEECCCHHHHHTTTCGGGTTSEEEEEEEESCSS
T ss_pred HHHHHHHhcCccEEEEEEEeecccccchhcccc-ccccccchhhhCccccCCCchhhhhhhHHhcCCCEEEEEEEeCCCC
Confidence 999999999999999999999999999999886 6999999999999999999999999999999999999999999999
Q ss_pred EeeEEEEEEeCCCCCHHHHHHHHHHhhcCcccccccCCCcceeecccCCCcceeEEeCCCcceecCCeEEEEEEeCCCcc
Q 019445 245 VSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWG 324 (341)
Q Consensus 245 g~~~~l~v~l~~~~~~~ei~~~~~~a~~~~~~~il~~~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~g 324 (341)
||++++++++++++++|||+++|++++++||+||++|+|+|+||+||+|++||||||+.+|+++ ++|+|+++|||||||
T Consensus 236 gs~~dl~v~l~k~~t~eei~~~lk~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~-~~~~k~~~wydne~g 314 (331)
T 2g82_O 236 GSISDITALLKREVTAEEVNAALKAAAEGPLKGILAYTEDEIVLQDIVMDPHSSIVDAKLTKAL-GNMVKVFAWYDNEWG 314 (331)
T ss_dssp CEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEE-TTEEEEEEEECTTHH
T ss_pred EEEEEEEEEECCCCCHHHHHHHHHHhhcCccCCccCCCCCCeeeeeeCCCCccceecchhcccc-CCEEEEEEEECCCch
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred hhhhHHHHHHHHhhc
Q 019445 325 YSSRVIDLIVHMAKT 339 (341)
Q Consensus 325 y~~r~~d~~~~~~~~ 339 (341)
|||||+||+.||+++
T Consensus 315 ys~r~~d~~~~~~~~ 329 (331)
T 2g82_O 315 YANRVADLVELVLRK 329 (331)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhc
Confidence 999999999999864
No 20
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=100.00 E-value=2.2e-98 Score=717.81 Aligned_cols=334 Identities=67% Similarity=1.096 Sum_probs=319.5
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEec
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 84 (341)
||+||||||||||||+++|+|.+||++||++|+++..+.++++||++||++||+|. +.++.+++ .|.++|+.+.++++
T Consensus 2 M~ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~-~~~~~~~~-~l~v~g~~i~v~~~ 79 (335)
T 1u8f_O 2 GKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFH-GTVKAENG-KLVINGNPITIFQE 79 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEECC
T ss_pred CceEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCC-CceEEcCC-eEEECCeEEEEEec
Confidence 56899999999999999999999999999999995468899999999999999999 88887776 89999999999988
Q ss_pred CCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCCCCCeeeeccCccccCCCCcEEeCCCCccceecc
Q 019445 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPELDIVSNASCTTNCLAP 164 (341)
Q Consensus 85 ~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~d~~~~V~Gvn~~~~~~~~~iIsnp~C~tt~Lap 164 (341)
.||++++|++.++|+||+|||++.+++.+++|+++|+|+|++|+|+.|.|++|||+|+++|++++++|||||||||||+|
T Consensus 80 ~d~~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap~~~~p~~V~gvN~~~~~~~~~iIsnpsCtt~~l~~ 159 (335)
T 1u8f_O 80 RDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLAP 159 (335)
T ss_dssp SSGGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCSSSCBCCTTTTGGGCCTTCSEEECCCHHHHHHHH
T ss_pred CCHHHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEeccCCCCCCeEEeccCHHHhCCCCCEEECCChHHHHHHH
Confidence 89999999878999999999999999999999999999999999988889999999999998557999999999999999
Q ss_pred hhHHHhhhcceeEEEEEEEeeccCcceeeeCCCCCCcccccccccccccccCChhHHHHHHhhhhcCceeEEEEEeeeee
Q 019445 165 LAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVD 244 (341)
Q Consensus 165 llk~L~~~fgi~~~~ittv~a~s~~~~~~d~~s~~~~~~gr~~~~niiP~~~g~~~~~~~~lpel~~~l~~~~~rVP~~~ 244 (341)
++|+|+++|||++++|||+|++||+|+.+|++++++++++|.+++|++|+++|++++++|++||++++++++++|||++|
T Consensus 160 ~lkpL~~~~gI~~~~~tt~~a~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~~ 239 (335)
T 1u8f_O 160 LAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTAN 239 (335)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCGGGGSBTTTCCEEEECCTTTTHHHHSGGGTTSEEEEEEEESCSS
T ss_pred HHHHHHHhCCcceeEEEEEeccccCccccccccccccccchhhhcCceeccCChhHHHHHHHHHhCCcEEEEEEEeccCC
Confidence 99999999999999999999999999999998657999999999999999999999999999999999999999999999
Q ss_pred EeeEEEEEEeCCCCCHHHHHHHHHHhhcCcccccccCCCcceeecccCCCcceeEEeCCCcceecCCeEEEEEEeCCCcc
Q 019445 245 VSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWG 324 (341)
Q Consensus 245 g~~~~l~v~l~~~~~~~ei~~~~~~a~~~~~~~il~~~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~g 324 (341)
||+++++++++++++.|||+++|+++|++||++|++|+|+|+||+||+|++||||||+.+|++++++|+|+++|||||||
T Consensus 240 g~~~~l~~~l~~~~t~eei~~~~~~a~~~~~~~il~~~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~g 319 (335)
T 1u8f_O 240 VSVVDLTCRLEKPAKYDDIKKVVKQASEGPLKGILGYTEHQVVSSDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFG 319 (335)
T ss_dssp CEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEEECTTHH
T ss_pred EEEEEEEEEECCCCCHHHHHHHHHHHhhCccCcEEcccCCCcceeeecCCCCceEEeCCCCEEecCCEEEEEEEEcCcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHhhcc
Q 019445 325 YSSRVIDLIVHMAKTQ 340 (341)
Q Consensus 325 y~~r~~d~~~~~~~~~ 340 (341)
|||||+|++.||++++
T Consensus 320 y~~r~~~~~~~~~~~~ 335 (335)
T 1u8f_O 320 YSNRVVDLMAHMASKE 335 (335)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred hHhHHHHHHHHHhccC
Confidence 9999999999998764
No 21
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=3.8e-98 Score=713.33 Aligned_cols=328 Identities=50% Similarity=0.857 Sum_probs=316.2
Q ss_pred eeEEEEccCHHHHHHHHHHHcC--CCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEec
Q 019445 7 IKIGINGFGRIGRLVARVALQR--DDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~--p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 84 (341)
+||||||||||||+++|+|++| |++||++|++. .+.++++|||+|||+||+|. +++..+++ .|.++|+.+.++++
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~-~~~~~~~~ll~~ds~~g~~~-~~v~~~~~-~l~v~g~~i~v~~~ 77 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDL-TDTKTLAHLLKYDSVHKKFP-GKVEYTEN-SLIVDGKEIKVFAE 77 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECS-SCHHHHHHHHHCCTTTCCCS-SCEEECSS-EEEETTEEEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcC-CChHHhhhhccCcCcCCCcC-CcEEEcCC-EEEECCeEEEEEec
Confidence 5899999999999999999999 99999999996 79999999999999999999 89988777 89999999998888
Q ss_pred CCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCCCCC-eeeeccCccccCCCCcEEeCCCCccceec
Q 019445 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAP-MFVVGVNEKEYKPELDIVSNASCTTNCLA 163 (341)
Q Consensus 85 ~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~d~~-~~V~Gvn~~~~~~~~~iIsnp~C~tt~La 163 (341)
.+|++++|++.++|+||+|||+|.+++.+++|+++|+|+++||+|++|.| ++|||+|+++|+++++||||||||||||+
T Consensus 78 ~dp~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~aGakkvVId~~a~d~p~~~V~eVN~~~i~~~~~iIsNpsCttn~la 157 (332)
T 1hdg_O 78 PDPSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAKGEDITVVIGCNEDQLKPEHTIISCASCTTNSIA 157 (332)
T ss_dssp SSGGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTCCEEECCCHHHHHHH
T ss_pred CChHHCcccccCCCEEEECCccchhHHHHHHHHHcCCcEEEEeCCCCCCCceEEeccCHHHhCCCCcEEECCccHHHHHH
Confidence 89999999777899999999999999999999999999999999988888 99999999999855799999999999999
Q ss_pred chhHHHhhhcceeEEEEEEEeeccCcceeeeCCCCCCcccccccccccccccCChhHHHHHHhhhhcCceeEEEEEeeee
Q 019445 164 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTV 243 (341)
Q Consensus 164 pllk~L~~~fgi~~~~ittv~a~s~~~~~~d~~s~~~~~~gr~~~~niiP~~~g~~~~~~~~lpel~~~l~~~~~rVP~~ 243 (341)
|++|+|+++|||++++|||+||+||+|+++|+++ +++|++|.+++|++|+++|+++|+.|++|+++++++++|+|||++
T Consensus 158 p~lkpL~~~~gI~~~~~ttvha~Sg~q~~~d~~~-~~~~~~r~~a~NiiP~~tg~a~ei~kvLp~l~gkl~~~a~rVP~~ 236 (332)
T 1hdg_O 158 PIVKVLHEKFGIVSGMLTTVHSYTNDQRVLDLPH-KDLRRARAAAVNIIPTTTGAAKAVALVVPEVKGKLDGMAIRVPTP 236 (332)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBGGGCCEEECCTHHHHHHHHCGGGTTTEEEEEEEESCS
T ss_pred HHHHHHHHhcCeeEeEEEEEEeccchhhhhcCcc-cccccchhHhhCcccccCCcccchhhhCccccCCEEEEeEEcccc
Confidence 9999999999999999999999999999999986 689999999999999999999999999999999999999999999
Q ss_pred eEeeEEEEEEeCCCCCHHHHHHHHHHhhcCcccccccCCCcceeecccCCCcceeEEeCCCcceecCCeEEEEEEeCCCc
Q 019445 244 DVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEW 323 (341)
Q Consensus 244 ~g~~~~l~v~l~~~~~~~ei~~~~~~a~~~~~~~il~~~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~ 323 (341)
|||+++++++++++++.|||+++|+++|++||||||+|+|+|+||+||+|++||||||+.+|++++++|+|+++||||||
T Consensus 237 ~g~l~~l~~~l~k~~t~eei~~~lk~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~ 316 (332)
T 1hdg_O 237 DGSITDLTVLVEKETTVEEVNAVMKEATEGRLKGIIGYNDEPIVSSDIIGTTFSGIFDATITNVIGGKLVKVASWYDNEY 316 (332)
T ss_dssp SCEEEEEEEEESSCCCHHHHHHHHHHHHTTTTTTTEEEECSCCCGGGGTTCCCSEEEETTTCEEETTTEEEEEEEECTTH
T ss_pred CcEEEEEEEEECCCCCHHHHHHHHHHHhhcccCCcccccCCCeeeeeeCCCCccceeccccCeEecCCEEEEEEEeCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhHHHHHHHHhh
Q 019445 324 GYSSRVIDLIVHMAK 338 (341)
Q Consensus 324 gy~~r~~d~~~~~~~ 338 (341)
||||||+|++.||++
T Consensus 317 gys~r~~d~~~~~~~ 331 (332)
T 1hdg_O 317 GYSNRVVDTLELLLK 331 (332)
T ss_dssp HHHHHHHHHHHHGGG
T ss_pred cchhHHHHHHHHHhc
Confidence 999999999999975
No 22
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=100.00 E-value=1.9e-96 Score=703.98 Aligned_cols=330 Identities=36% Similarity=0.680 Sum_probs=306.3
Q ss_pred ceeEEEEccCHHHHHHHHHHHc---CCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEE
Q 019445 6 KIKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~---~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 82 (341)
++||||||||||||+++|+|.+ ||++||++|++. .+.++++|||+|||+||+|. ++++.+++ .|.++|+.+.++
T Consensus 2 ~ikVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~~-~~~~~~~~ll~~ds~~g~~~-~~v~~~~~-~l~v~g~~i~v~ 78 (339)
T 2x5j_O 2 TVRVAINGFGRIGRNVVRALYESGRRAEITVVAINEL-ADAAGMAHLLKYDTSHGRFA-WEVRQERD-QLFVGDDAIRVL 78 (339)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEECS-SCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEE
T ss_pred CeEEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeCC-CCHHHHHHHhcccccCCCCC-ceEEEcCC-eeEECCEEEEEE
Confidence 4899999999999999999999 999999999997 78999999999999999999 88888777 899999999888
Q ss_pred ecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCC-CCCC-eeeeccCccccCCCCcEEeCCCCccc
Q 019445 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS-KDAP-MFVVGVNEKEYKPELDIVSNASCTTN 160 (341)
Q Consensus 83 ~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~-~d~~-~~V~Gvn~~~~~~~~~iIsnp~C~tt 160 (341)
++.||++++|++.++|+||+|||++.+++.+++|+++|+|+|+||+|+ .|.| ++|||+|+++|+++.+||||||||||
T Consensus 79 ~~~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~ad~d~p~~~V~gvN~~~~~~~~~iIsnpsCttn 158 (339)
T 2x5j_O 79 HERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTN 158 (339)
T ss_dssp CCSSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHHH
T ss_pred ecCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCCEEEEeccccCCCCceeecccCHHHhcCCCCEEECCCcHHH
Confidence 888899999976689999999999999999999999999999999998 5778 99999999999854799999999999
Q ss_pred eecchhHHHhhhcceeEEEEEEEeeccCcceeeeCCCCCCcccccccccccccccCChhHHHHHHhhhhcCceeEEEEEe
Q 019445 161 CLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRV 240 (341)
Q Consensus 161 ~Lapllk~L~~~fgi~~~~ittv~a~s~~~~~~d~~s~~~~~~gr~~~~niiP~~~g~~~~~~~~lpel~~~l~~~~~rV 240 (341)
||+|++|+|+++|||++++|||+||+||+|+.+|+++ ++||++|++++|++|+++|+++++.+++|+|+++++++++||
T Consensus 159 ~lap~lkpL~~~~gI~~~~~ttvha~Tg~q~~~d~~~-~d~r~~r~a~~NiiP~~tg~a~ei~kvlp~l~gkl~~~a~rV 237 (339)
T 2x5j_O 159 CIIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYH-PDLRRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRV 237 (339)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEECCC------------CTTTTSCCCCCCEEECCCHHHHHHHHSGGGTTSEEEEEEEC
T ss_pred HHHHHHHHHHHccCcceeeEEEEEecccccccccccc-ccccchhhHHhCcccccCChHHHHHHHHHHhcCcEEEEEEEe
Confidence 9999999999999999999999999999999999987 689999999999999999999999999999999999999999
Q ss_pred eeeeEeeEEEEEEeCCCCCHHHHHHHHHHhhcCcccccccCCCcceeecccCCCcceeEEeCCCcceecCCeEEEEEEeC
Q 019445 241 PTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYD 320 (341)
Q Consensus 241 P~~~g~~~~l~v~l~~~~~~~ei~~~~~~a~~~~~~~il~~~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wyd 320 (341)
|++|||+++++++++++++.|||+++|+++|++||+||++|+|+|+||+||+|++|||+||+.+|++++++|+|+++|||
T Consensus 238 P~~~g~~~~l~v~l~k~~t~eei~~~lk~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wyd 317 (339)
T 2x5j_O 238 PTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCD 317 (339)
T ss_dssp SSCSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCSSEEEEEEEEEEETTTEEEEEEEEC
T ss_pred cccCcEEEEEEEEECCCCCHHHHHHHHHHHhhcCCCcEEcccCCcccccccCCCCCceEEEcccceeccCCEEEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchhhhHHHHHHHHhhc
Q 019445 321 NEWGYSSRVIDLIVHMAKT 339 (341)
Q Consensus 321 ne~gy~~r~~d~~~~~~~~ 339 (341)
|||||||||+|++.||+++
T Consensus 318 ne~gys~r~~d~~~~~~~~ 336 (339)
T 2x5j_O 318 NEWGFANRMLDTTLAMATV 336 (339)
T ss_dssp HHHHHHHHHHHHHHHHHCC
T ss_pred CCcccHhHHHHHHHHHhhh
Confidence 9999999999999999865
No 23
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=4.8e-53 Score=404.96 Aligned_cols=238 Identities=20% Similarity=0.245 Sum_probs=211.2
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccc--cccCcc--cCcee-eecCCcceEECCEEEE
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYD--SVHGQW--KHNEL-KVKDEKTLLFGEKPVA 80 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~d--s~~g~~--~~~~v-~~~~~~~l~i~g~~i~ 80 (341)
|+||||||||+||+.++|+|.+||++||++|++. +.++++||++|| ++||+| . +.+ ...++ .+.+++
T Consensus 2 mikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~--~~~~~~~l~~~dg~s~~g~~~~~-~~v~~~~~~-~l~v~~---- 73 (343)
T 2yyy_A 2 PAKVLINGYGSIGKRVADAVSMQDDMEVIGVTKT--KPDFEARLAVEKGYKLFVAIPDN-ERVKLFEDA-GIPVEG---- 73 (343)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEEES--SCSHHHHHHHHTTCCEEESSCCH-HHHHHHHHT-TCCCCC----
T ss_pred ceEEEEECCCHHHHHHHHHHHhCCCceEEEEecC--CHHHHHHHHHhcCCccccccCCC-ceeecccCC-eEEECC----
Confidence 4899999999999999999999999999999996 388899999999 999998 4 444 23333 444443
Q ss_pred EEecCCCCCCCccCCCccEEEecCCCccCHHHHH-HHHhCCCcEEEecCCCC-C-CC-eeeeccCccccCCCCcEEeCCC
Q 019445 81 VFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAA-AHLKGGAKKVVISAPSK-D-AP-MFVVGVNEKEYKPELDIVSNAS 156 (341)
Q Consensus 81 v~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~-~~l~~G~k~V~lSa~~~-d-~~-~~V~Gvn~~~~~~~~~iIsnp~ 156 (341)
+++++.| ++|+||+|||++.+.+.++ +|+++|++ |++|++.. | .| ++|||+|+++++ ..++|||||
T Consensus 74 -----~~~~~~~---~vDiV~eatg~~~s~~~a~~~~l~aG~~-VI~sap~~~d~vp~~vV~gvN~~~~~-~~~iIsn~s 143 (343)
T 2yyy_A 74 -----TILDIIE---DADIVVDGAPKKIGKQNLENIYKPHKVK-AILQGGEKAKDVEDNFNALWSYNRCY-GKDYVRVVS 143 (343)
T ss_dssp -----BGGGTGG---GCSEEEECCCTTHHHHHHHHTTTTTTCE-EEECTTSCGGGSSEEECTTTTHHHHT-TCSEEEECC
T ss_pred -----chHHhcc---CCCEEEECCCccccHHHHHHHHHHCCCE-EEECCCccccCCCceEEcccCHHHhc-cCCEEeccc
Confidence 2344445 8999999999999999996 99999955 77899876 5 78 999999999998 478999999
Q ss_pred CccceecchhHHHhhhcceeEEEEEEEeeccCcceeeeCCCCCCcccccccccccccc----cCChhHHHHHHhhhhcCc
Q 019445 157 CTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPS----STGAAKAVGKVLPALNGK 232 (341)
Q Consensus 157 C~tt~Lapllk~L~~~fgi~~~~ittv~a~s~~~~~~d~~s~~~~~~gr~~~~niiP~----~~g~~~~~~~~lpel~~~ 232 (341)
|+||||+|++|+||++|||++++|||+|++|+. + +.+|++++|++|+ .+|+++++.|++|++++|
T Consensus 144 CtT~~lap~lk~L~~~fgI~~~~vtT~~a~sg~--------~---~~~r~~~~NiiP~~i~~~tg~~k~~~kilp~l~gk 212 (343)
T 2yyy_A 144 CNTTGLCRILYAINSIADIKKARIVLVRRAADP--------N---DDKTGPVNAITPNPVTVPSHHGPDVVSVVPEFEGK 212 (343)
T ss_dssp HHHHHHHHHHHHHHTTSEEEEEEEEEEEESSCT--------T---CSSCCCSSCCEESSSSSSCTHHHHHHHHCGGGTTS
T ss_pred hhhHHHHHHHHHHHHHcCceEEEEEeeeeccCc--------C---cchhhHHhcccCCCCCCCCcchHHHHHhhhccccc
Confidence 999999999999999999999999999999982 1 4568899999999 999999999999999999
Q ss_pred eeEEEEEeeeeeEeeEEEEEEeCCCCCHHHHHHHHHHhhc
Q 019445 233 LTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESE 272 (341)
Q Consensus 233 l~~~~~rVP~~~g~~~~l~v~l~~~~~~~ei~~~~~~a~~ 272 (341)
++++|+|||+++||+.+++++++++++++||+++|++++.
T Consensus 213 l~~~avRVPv~~gh~~~l~v~l~~~~t~eei~~~l~~a~~ 252 (343)
T 2yyy_A 213 ILTSAVIVPTTLMHMHTLMVEVDGDVSRDDILEAIKKTPR 252 (343)
T ss_dssp EEEEEEEESCSSCEEEEEEEEEESCCCHHHHHHHHHHSTT
T ss_pred eeeEEEEecccceEEEEEEEEECCCCCHHHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999865
No 24
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=100.00 E-value=1.1e-47 Score=367.61 Aligned_cols=298 Identities=18% Similarity=0.187 Sum_probs=221.1
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcC--CCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEE
Q 019445 6 KIKIGINGF-GRIGRLVARVALQR--DDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~--p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 82 (341)
|+||||+|+ |++|++++|+|++| |++|++++++.+..++ .+.++++.+.+
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~--------------------------~~~~~~~~i~~- 55 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGK--------------------------TYRFNGKTVRV- 55 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTC--------------------------EEEETTEEEEE-
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCC--------------------------ceeecCceeEE-
Confidence 579999997 99999999999999 8999999997521111 22234444444
Q ss_pred ecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCC---CCCeeeeccCccccCC--CCcEEeCCCC
Q 019445 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK---DAPMFVVGVNEKEYKP--ELDIVSNASC 157 (341)
Q Consensus 83 ~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~---d~~~~V~Gvn~~~~~~--~~~iIsnp~C 157 (341)
.+.+++ +|. ++|+||+|||++.+++.++.|+++|+++|++|++++ +.|.+++++|+++|+. ++++||||||
T Consensus 56 ~~~~~~--~~~--~vDvVf~a~g~~~s~~~a~~~~~~G~~vId~s~~~R~~~~~~~~vpevN~~~i~~~~~~~iIanp~C 131 (336)
T 2r00_A 56 QNVEEF--DWS--QVHIALFSAGGELSAKWAPIAAEAGVVVIDNTSHFRYDYDIPLVVPEVNPEAIAEFRNRNIIANPNC 131 (336)
T ss_dssp EEGGGC--CGG--GCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGGGGGTTEEECCCH
T ss_pred ecCChH--Hhc--CCCEEEECCCchHHHHHHHHHHHcCCEEEEcCCccccCCCCCeEeccCCHHHhccccCCcEEECCCh
Confidence 333443 574 899999999999999999999999999999999986 4789999999999984 2779999999
Q ss_pred ccceecchhHHHhhhcceeEEEEEEEeeccCcce-eeeCCCC-----------CCcccccccccccccccC-----Ch--
Q 019445 158 TTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQK-TVDGPSM-----------KDWRGGRAASFNIIPSST-----GA-- 218 (341)
Q Consensus 158 ~tt~Lapllk~L~~~fgi~~~~ittv~a~s~~~~-~~d~~s~-----------~~~~~gr~~~~niiP~~~-----g~-- 218 (341)
||||++|++++|+++|||+++.|+|+|++||+|+ .+|+.+. .+++++|++++|++|+++ |.
T Consensus 132 ~tt~~~~~l~pL~~~~~i~~~~vtt~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~gh~~ 211 (336)
T 2r00_A 132 STIQMLVALKPIYDAVGIERINVTTYQSVSGAGKAGIDELAGQTAKLLNGYPAETNTFSQQIAFNCIPQIDQFMDNGYTK 211 (336)
T ss_dssp HHHHHHHHHHHHHHHHCEEEEEEEEEEESSSCCTTSCC-----------------------------CCBCTTTCSSCBH
T ss_pred HHHHHHHHHHHHHHhCCccEEEEEEEEecccCChhhhHHHHHHHHHhhcCCCCCccccchhhhcCcccccCCcccCCccH
Confidence 9999999999999999999999999999999974 7776542 267888999999999975 64
Q ss_pred -----hHHHHHHhhhhcCceeEEEEEeeeeeEeeEEEEEEeCCCCCHHHHHHHHHHhhcCcccccccCCCcceeecccCC
Q 019445 219 -----AKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDVVSTDFVG 293 (341)
Q Consensus 219 -----~~~~~~~lpel~~~l~~~~~rVP~~~g~~~~l~v~l~~~~~~~ei~~~~~~a~~~~~~~il~~~~~~~vs~d~~~ 293 (341)
.++..+++|+++.+++++|+|||++|||+++++++++++++.+||+++|++ .||++++...+-|..-.+..|
T Consensus 212 Ee~k~~~e~~kil~~~~~~v~~t~~rVP~~~g~~~~~~~~l~~~~t~~ei~~~~~~---~~~v~v~~~~~~p~~~~~v~g 288 (336)
T 2r00_A 212 EEMKMVWETQKIFNDPSIMVNPTCVRVPVFYGHAEAVHVETRAPIDAEQVMDMLEQ---TDGIELFRGADFPTQVRDAGG 288 (336)
T ss_dssp HHHHHHHHHHHHTTCTTCEEEEEEEEESSCBSEEEEEEEEESSCCCHHHHHHHHHH---STTEEECCCCSSGGGCCCCCS
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEeEEeccCcEEEEEEEEEeCCCCCHHHHHHHHHh---CCCeEEECCCCCCcCHHHhCC
Confidence 445677888888899999999999999999999999999999999999997 789988873332322214444
Q ss_pred CcceeEEeCCCcceecCCeEEEEEEeCCC-cchhhhHHHHHHHHhh
Q 019445 294 DSRSSIFDAKAGIALSKNFVKLVSWYDNE-WGYSSRVIDLIVHMAK 338 (341)
Q Consensus 294 ~~~s~~~d~~~~~~~~~~~~k~~~wydne-~gy~~r~~d~~~~~~~ 338 (341)
.-+-.|--..... ..++.+.++++.||- +|-|-+-+-.|+.|-+
T Consensus 289 ~~~~~vgr~~~d~-~~~~~l~~~~~~DNl~kGAAg~Avq~~nl~~~ 333 (336)
T 2r00_A 289 KDHVLVGRVRNDI-SHHSGINLWVVADNVRKGAATNAVQIAELLVR 333 (336)
T ss_dssp SSCEEEEEEEEET-TEEEEEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEEecC-CCCCEEEEEEEehhHHHhHHHHHHHHHHHHHh
Confidence 3333221111000 023568889999998 7888888877777754
No 25
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=100.00 E-value=2.1e-48 Score=371.75 Aligned_cols=293 Identities=21% Similarity=0.249 Sum_probs=235.7
Q ss_pred eeEEEEcc-CHHHHHHHHHHH--cCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEe
Q 019445 7 IKIGINGF-GRIGRLVARVAL--QRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG 83 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~--~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 83 (341)
+||||+|+ ||+|++++|+|. +||.++++.+.+.. + . +. .+.++|+.+.++.
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~-------------~-~-----------g~-~l~~~g~~i~v~~ 54 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPR-------------S-A-----------GV-RLAFRGEEIPVEP 54 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGG-------------G-S-----------SC-EEEETTEEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccc-------------c-C-----------CC-EEEEcCceEEEEe
Confidence 48999997 999999999999 78877776554320 0 0 11 5667777777665
Q ss_pred cCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCC---CCCeeeeccCccccCCCCcEEeCCCCccc
Q 019445 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK---DAPMFVVGVNEKEYKPELDIVSNASCTTN 160 (341)
Q Consensus 84 ~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~---d~~~~V~Gvn~~~~~~~~~iIsnp~C~tt 160 (341)
. +++ +| ++|+||+|||++.++++++.|+++|+++||+|++++ |.|++|||+|+++|+...++|||||||||
T Consensus 55 ~-~~~--~~---~~DvV~~a~g~~~s~~~a~~~~~~G~~vId~s~~~R~~~~~~~~vpevN~~~i~~~~~iIanp~C~tt 128 (331)
T 2yv3_A 55 L-PEG--PL---PVDLVLASAGGGISRAKALVWAEGGALVVDNSSAWRYEPWVPLVVPEVNREKIFQHRGIIANPNCTTA 128 (331)
T ss_dssp C-CSS--CC---CCSEEEECSHHHHHHHHHHHHHHTTCEEEECSSSSTTCTTSCBCCTTSCGGGGGGCSSEEECCCHHHH
T ss_pred C-Chh--hc---CCCEEEECCCccchHHHHHHHHHCCCEEEECCCccccCCCCCEEEcCcCHHHhcCCCCEEECCCHHHH
Confidence 4 444 57 899999999999999999999999999999999975 57999999999999843689999999999
Q ss_pred eecchhHHHhhhcceeEEEEEEEeeccCc------------ceeeeCCCCCCccccccccccccccc--------CChhH
Q 019445 161 CLAPLAKVIHDKFGIVEGLMTTVHSITAT------------QKTVDGPSMKDWRGGRAASFNIIPSS--------TGAAK 220 (341)
Q Consensus 161 ~Lapllk~L~~~fgi~~~~ittv~a~s~~------------~~~~d~~s~~~~~~gr~~~~niiP~~--------~g~~~ 220 (341)
|++|++++|+++|||+++.|+|+|++||+ |.++|+++.++++++|.+++|++|++ ++.++
T Consensus 129 ~~~~~l~pL~~~~~I~~~~vtt~~~~SgaG~~~~~~l~~q~~~~~~~~~~~~~~~~~~~a~niiP~~~~~~~~~ht~e~~ 208 (331)
T 2yv3_A 129 ILAMALWPLHRAFQAKRVIVATYQAASGAGAKAMEELLTETHRFLHGEAPKAEAFAHPLPFNVIPHIDAFQENGYTREEM 208 (331)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEBCGGGGCHHHHHHHHHHHHHHHTSSCCCCCSSSSCCTTCCBSCCSCBCTTSCBHHHH
T ss_pred HHHHHHHHHHHhCCceEEEEEEEeecccCCcchhHHHHHHHHhhhcCccccccccchhhhcCcccccCccccCCCcHHHH
Confidence 99999999999999999999999999998 77889887679999999999999998 66655
Q ss_pred HH----HHHh--hhhcCceeEEEEEeeeeeEeeEEEEEEeCCCCCHHHHHHHHHHhhcCcccccccCCCc---ceeeccc
Q 019445 221 AV----GKVL--PALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEE---DVVSTDF 291 (341)
Q Consensus 221 ~~----~~~l--pel~~~l~~~~~rVP~~~g~~~~l~v~l~~~~~~~ei~~~~~~a~~~~~~~il~~~~~---~~vs~d~ 291 (341)
++ .+++ |+++ ++++|+|||++|||+++++++++++++.+||+++|++ .||++++.-.++ |. ..+.
T Consensus 209 ~i~~e~~kil~~~~l~--v~~~~~rVP~~~g~~~~~~~~l~~~~t~eei~~~~~~---~~~v~v~~~~~~~~~p~-~~~~ 282 (331)
T 2yv3_A 209 KVVWETHKIFGDDTIR--ISATAVRVPTLRAHAEAVSVEFARPVTPEAAREVLKE---APGVEVVDEPEAKRYPM-PLTA 282 (331)
T ss_dssp HHHHHHHHHTTCTTCE--EEEECCBCSCSSEEEEEEEEEESSCCCHHHHHHHHTT---STTCCBCCBTTTTBCCC-HHHH
T ss_pred HHHHHHHHHhCCCCce--EEEEEEEeccCceEEEEEEEEECCCCCHHHHHHHHHc---CCCeEEEeCCCcCCCCC-hhhc
Confidence 56 7787 8875 9999999999999999999999999999999999886 678888753211 11 1144
Q ss_pred CCCcceeEEeCCCcceecCCeEEEEEEeCCC-cchhhhHHHHHHHHhh
Q 019445 292 VGDSRSSIFDAKAGIALSKNFVKLVSWYDNE-WGYSSRVIDLIVHMAK 338 (341)
Q Consensus 292 ~~~~~s~~~d~~~~~~~~~~~~k~~~wydne-~gy~~r~~d~~~~~~~ 338 (341)
.|.-+-.|--.... ...++.+.++++.||- +|.|-+-+-.|+.|.+
T Consensus 283 ~g~~~~~igr~~~d-~~~~~~l~~~~~~DNl~kGAAg~AVq~~nl~~~ 329 (331)
T 2yv3_A 283 SGKWDVEVGRIRKS-LAFENGLDFFVVGDQLLKGAALNAVQIAEEWLK 329 (331)
T ss_dssp TTCSSEEEEEEEEC-SSSTTEEEEEEEEETTHHHHTTHHHHHHHHHC-
T ss_pred cCCceEEEEEEEEC-CCCCCEEEEEEEechHHHHHHHHHHHHHHHHhh
Confidence 44443333211111 0134678999999999 8999998888888754
No 26
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1e-47 Score=368.35 Aligned_cols=298 Identities=15% Similarity=0.140 Sum_probs=233.1
Q ss_pred CceeEEEEcc-CHHHHHHHHHHH--cCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEE
Q 019445 5 KKIKIGINGF-GRIGRLVARVAL--QRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAV 81 (341)
Q Consensus 5 ~~irV~I~G~-G~iG~~llr~l~--~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v 81 (341)
|++||+|+|+ |++|++++|+|. +||.++++++++....++ .+.++|..+.+
T Consensus 5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~--------------------------~~~~~g~~i~~ 58 (340)
T 2hjs_A 5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQ--------------------------RMGFAESSLRV 58 (340)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTC--------------------------EEEETTEEEEC
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCC--------------------------ccccCCcceEE
Confidence 3579999998 999999999999 889999999987521111 12233443433
Q ss_pred EecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCCC--CCeeeeccCccccCCCC---cEEeCCC
Q 019445 82 FGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKD--APMFVVGVNEKEYKPEL---DIVSNAS 156 (341)
Q Consensus 82 ~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~d--~~~~V~Gvn~~~~~~~~---~iIsnp~ 156 (341)
. +.+++. |. ++|+||+|+|++.+++.++.++++|+|+|++|++++| .|.+++++|+++|+ .+ ++|||||
T Consensus 59 ~-~~~~~~--~~--~~DvV~~a~g~~~s~~~a~~~~~aG~kvId~Sa~~rd~~~~~~vpevN~~~i~-~~~~~~iIanp~ 132 (340)
T 2hjs_A 59 G-DVDSFD--FS--SVGLAFFAAAAEVSRAHAERARAAGCSVIDLSGALEPSVAPPVMVSVNAERLA-SQAAPFLLSSPC 132 (340)
T ss_dssp E-EGGGCC--GG--GCSEEEECSCHHHHHHHHHHHHHTTCEEEETTCTTTTTTSCBCCHHHHGGGGG-GSCSSCEEECCC
T ss_pred e-cCCHHH--hc--CCCEEEEcCCcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCeEEcCcCHHHHh-cCcCCCEEEcCC
Confidence 2 334433 64 8999999999999999999999999999999999874 57788889999998 34 7999999
Q ss_pred CccceecchhHHHhhhcceeEEEEEEEeeccCcce-eeeCCCC--CC---------cccccccccccccccC-----C--
Q 019445 157 CTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQK-TVDGPSM--KD---------WRGGRAASFNIIPSST-----G-- 217 (341)
Q Consensus 157 C~tt~Lapllk~L~~~fgi~~~~ittv~a~s~~~~-~~d~~s~--~~---------~~~gr~~~~niiP~~~-----g-- 217 (341)
|||||++|++++|+++|||+++.|+|+|++||+|+ .+|.... ++ ..++|.+++|++|+++ |
T Consensus 133 C~tt~~~~~l~pL~~~~~i~~~~v~t~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~gh~ 212 (340)
T 2hjs_A 133 AVAAELCEVLAPLLATLDCRQLNLTACLSVSSLGREGVKELARQTAELLNARPLEPRLFDRQIAFNLLAQVGAVDAEGHS 212 (340)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEEEEEEEECGGGGCHHHHHHHHHHHHHHHTTCCCCCSSSSSCCTTCCBSSSSCBCTTSCB
T ss_pred HHHHHHHHHHHHHHHhcCcceEEEEEecccCCCCccccHhHHHHHHHHhccCCccccccchhhccCeeccccCcccCCcc
Confidence 99999999999999999999999999999999985 3564210 12 3345778999999987 6
Q ss_pred -----hhHHHHHHhhhhcCceeEEEEEeeeeeEeeEEEEEEeCCCCCHHHHHHHHHHhhcCcccccccCCCcceeecccC
Q 019445 218 -----AAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEEDVVSTDFV 292 (341)
Q Consensus 218 -----~~~~~~~~lpel~~~l~~~~~rVP~~~g~~~~l~v~l~~~~~~~ei~~~~~~a~~~~~~~il~~~~~~~vs~d~~ 292 (341)
..++..+++|+++++++++|+|||++|||++++|++++++++.+||+++|++ +||++++...+-|-...+..
T Consensus 213 ~Ee~k~~~~~~kil~~~~~~v~~~~~rVP~~~g~~~~~~~~l~~~~t~eei~~~~~~---~~~V~v~~~~~~p~~~~~v~ 289 (340)
T 2hjs_A 213 AIERRIFAEVQALLGERIGPLNVTCIQAPVFFGDSLSVTLQCAEPVDLAAVTRVLDA---TKGIEWVGEGDYPTVVGDAL 289 (340)
T ss_dssp HHHHHHHHHHHHHTGGGBCCEEEEEEECSCSSCEEEEEEEEESSCCCHHHHHHHHHH---STTEEECCTTCCCCCCCCCT
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEeEEcCcCceEEEEEEEEECCCCCHHHHHHHHhc---CCCcEEeCCCCCCccHHHcC
Confidence 3445688889999999999999999999999999999999999999999985 68998887333332221445
Q ss_pred CCcceeEEeCCCcceecCCeEEEEEEeCC-CcchhhhHHHHHHHHhh
Q 019445 293 GDSRSSIFDAKAGIALSKNFVKLVSWYDN-EWGYSSRVIDLIVHMAK 338 (341)
Q Consensus 293 ~~~~s~~~d~~~~~~~~~~~~k~~~wydn-e~gy~~r~~d~~~~~~~ 338 (341)
|.-+-.|--..... ..++.+.+.+|.|| .+|.|-.-+-.++.|.+
T Consensus 290 g~~~~~vgr~r~~~-~~~~~l~~~~~~DNl~kGAA~~avq~~~l~~~ 335 (340)
T 2hjs_A 290 GQDETYVGRVRAGQ-ADPCQVNLWIVSDNVRKGAALNAVLLGELLIK 335 (340)
T ss_dssp TSSCEEEEEEEECS-SCTTEEEEEEEECCCCCCCHHHHHHHHHHHHH
T ss_pred CCCEEEEEEEEecC-CCCCEEEEEEEechHHHHHHHHHHHHHHHHHH
Confidence 54433332222111 13567899999999 99999999888888754
No 27
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=100.00 E-value=6e-48 Score=372.37 Aligned_cols=294 Identities=14% Similarity=0.135 Sum_probs=234.0
Q ss_pred CceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEe
Q 019445 5 KKIKIGINGF-GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG 83 (341)
Q Consensus 5 ~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 83 (341)
+++||||+|+ ||+|++++|+|.+||++|++++++....+ .+|++.||+|. +.+ . . .+. +.
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g------~~~~~~~~~~~-~~v-~--~-dl~--------~~ 75 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAG------QSMESVFPHLR-AQK-L--P-TLV--------SV 75 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTT------SCHHHHCGGGT-TSC-C--C-CCB--------CG
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcC------CCHHHhCchhc-Ccc-c--c-cce--------ec
Confidence 3589999997 99999999999999999999999863222 35788888887 321 0 0 111 11
Q ss_pred cCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCC-CC------------------Ceeeecc---C
Q 019445 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-DA------------------PMFVVGV---N 141 (341)
Q Consensus 84 ~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~-d~------------------~~~V~Gv---n 141 (341)
+ ++ .|+ ++|+||+|||++.+++.++.+ ++|+++||+|++++ +. ++++||+ |
T Consensus 76 --~-~~-~~~--~vDvVf~atp~~~s~~~a~~~-~aG~~VId~sa~~R~~~~~~y~~~y~~~~~~~~~l~~~vygvpE~n 148 (359)
T 1xyg_A 76 --K-DA-DFS--TVDAVFCCLPHGTTQEIIKEL-PTALKIVDLSADFRLRNIAEYEEWYGQPHKAVELQKEVVYGLTEIL 148 (359)
T ss_dssp --G-GC-CGG--GCSEEEECCCTTTHHHHHHTS-CTTCEEEECSSTTTCSCHHHHHHHHSSCCSCHHHHTTCEECCHHHH
T ss_pred --c-hh-Hhc--CCCEEEEcCCchhHHHHHHHH-hCCCEEEECCccccCCchhhhhhhhcCCcCChhhcCCceEECCccC
Confidence 1 22 464 899999999999999999999 99999999999886 22 5799999 8
Q ss_pred ccccCCCCcEEeCCCCccceecchhHHHhhhccee--EEEEEEEeeccCcce-eeeCCCCCCcccccccccccccccCCh
Q 019445 142 EKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITATQK-TVDGPSMKDWRGGRAASFNIIPSSTGA 218 (341)
Q Consensus 142 ~~~~~~~~~iIsnp~C~tt~Lapllk~L~~~fgi~--~~~ittv~a~s~~~~-~~d~~s~~~~~~gr~~~~niiP~~~g~ 218 (341)
+++|+ .+++||||||||||++|++++|+++|+|+ ++.|+|+|++||+|+ ..|+.+ ++ .+..|++||.++.
T Consensus 149 ~~~i~-~~~iIanpgC~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~~-~~-----~~~~ni~py~~~~ 221 (359)
T 1xyg_A 149 REDIK-KARLVANPGCYPTTIQLPLVPLLKANLIKHENIIIDAKSGVSGAGRGAKEANL-YS-----EIAEGISSYGVTR 221 (359)
T ss_dssp HHHHH-TCSEEECCCHHHHHHHHHHHHHHHTTCBCSSSCEEEEEEEGGGGCSCCCGGGB-HH-----HHTTCCEECSCSC
T ss_pred HHHhc-cCCEEECCCcHHHHHHHHHHHHHHcCCCCCCeEEEEEEEEccccCcccchhhh-hH-----HHhcCeecccccc
Confidence 99998 58999999999999999999999999999 999999999999887 355432 12 3467999999885
Q ss_pred hHHHHHHhhhhc---C-------ceeEEEEEeeeeeEeeEEEEEEeCCCCCHHHHHHHHHHhhc-CcccccccCCCccee
Q 019445 219 AKAVGKVLPALN---G-------KLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESE-GKLKGILGYTEEDVV 287 (341)
Q Consensus 219 ~~~~~~~lpel~---~-------~l~~~~~rVP~~~g~~~~l~v~l~~~~~~~ei~~~~~~a~~-~~~~~il~~~~~~~v 287 (341)
|+|+||++ + +++++|+|||++|||++++|++++++++.+||+++|+++|+ +||++++...+-|-.
T Consensus 222 ----h~h~pEi~~~l~~~~~~~~~v~~t~~rvP~~~G~~~~i~~~l~~~~t~eei~~~~~~~y~~~~~V~v~~~~~~p~~ 297 (359)
T 1xyg_A 222 ----HRHVPEIEQGLSDVAQSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVRTEDLHQQLKTSYEDEEFVKVLDEGVVPRT 297 (359)
T ss_dssp ----CTHHHHHHHHHHHHHTSCCCCEEECEEESSSSCEEEEEEEEBCTTCCHHHHHHHHHHHHTTCSSEEECCTTCCCBG
T ss_pred ----cccHHHHHHHHHHhcCCCCCEEEEEEEecccceEEEEEEEEeCCCCCHHHHHHHHHHhhCCCCCEEEcCCCCCCCH
Confidence 67888887 4 68999999999999999999999999999999999999998 699999864333432
Q ss_pred ecccCCCcceeEEeCCCcceecCCeEEEEEEeCCC-cchhhhHHHHHHHHhhc
Q 019445 288 STDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNE-WGYSSRVIDLIVHMAKT 339 (341)
Q Consensus 288 s~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne-~gy~~r~~d~~~~~~~~ 339 (341)
- +..|.-+-.|- ..... .++.+.++++.||- .|.|-+-+-.++.|-..
T Consensus 298 ~-~v~g~n~~~ig-~~~d~--~~~~l~~~~~~DNl~kGAAg~Avq~~nl~~g~ 346 (359)
T 1xyg_A 298 H-NVRGSNYCHMS-VFPDR--IPGRAIIISVIDNLVKGASGQALQNLNIMLGY 346 (359)
T ss_dssp G-GTTTSSCEEEE-EEECS--STTEEEEEEEECTTTTTTHHHHHHHHHHHTTS
T ss_pred H-HhcCCCeEEEE-EEEeC--CCCEEEEEEEehhhhHhHHHHHHHHHHHHhCC
Confidence 2 34444333331 11111 24678999999999 89999999888888654
No 28
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.8e-48 Score=372.99 Aligned_cols=240 Identities=21% Similarity=0.272 Sum_probs=198.4
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccc--cccCcccCcee-eecCCcceEECCEEEEEE
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYD--SVHGQWKHNEL-KVKDEKTLLFGEKPVAVF 82 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~d--s~~g~~~~~~v-~~~~~~~l~i~g~~i~v~ 82 (341)
|+||||+|+||+|++++|+|.+||++++++|++. +....+++++++ ++||.|. +.+ ..++. .+.+++
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~--~~~~~~~~~~~~g~~~~~~~~-~~v~~~~~~-~l~v~~------ 70 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQDDMKVIGVSKT--RPDFEARMALKKGYDLYVAIP-ERVKLFEKA-GIEVAG------ 70 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSSSEEEEEEEES--SCSHHHHHHHHTTCCEEESSG-GGHHHHHHT-TCCCCE------
T ss_pred CeEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcC--ChhHHHHhcCCcchhhccccc-cceeeecCC-ceEEcC------
Confidence 4799999999999999999999999999999986 345566777776 7888887 543 22222 233321
Q ss_pred ecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCC-CC--CeeeeccCccccCCCCcEEeCCCCcc
Q 019445 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-DA--PMFVVGVNEKEYKPELDIVSNASCTT 159 (341)
Q Consensus 83 ~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~-d~--~~~V~Gvn~~~~~~~~~iIsnp~C~t 159 (341)
+++++. .++|+||+|||++.+++.+++++++|+++++.+ +.. |. |++|||+|+++++ +.++||||||||
T Consensus 71 ---~~~~~~---~~vDvV~~atp~~~~~~~a~~~l~aG~~VId~s-p~~~d~~~~~~V~gvN~e~~~-~~~iIanp~C~t 142 (337)
T 1cf2_P 71 ---TVDDML---DEADIVIDCTPEGIGAKNLKMYKEKGIKAIFQG-GEKHEDIGLSFNSLSNYEESY-GKDYTRVVSCNT 142 (337)
T ss_dssp ---EHHHHH---HTCSEEEECCSTTHHHHHHHHHHHHTCCEEECT-TSCHHHHSCEECHHHHGGGGT-TCSEEEECCHHH
T ss_pred ---CHHHHh---cCCCEEEECCCchhhHHHHHHHHHcCCEEEEec-CCCCccCCCeEEeeeCHHHhc-CCCEEEcCCcHH
Confidence 122221 279999999999999999999999998755544 434 33 8999999999998 579999999999
Q ss_pred ceecchhHHHhhhcceeEEEEEEEeeccCcceeeeCCCCCCcccccccccccccc----cCChhHHHHHHhhhhcCceeE
Q 019445 160 NCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPS----STGAAKAVGKVLPALNGKLTG 235 (341)
Q Consensus 160 t~Lapllk~L~~~fgi~~~~ittv~a~s~~~~~~d~~s~~~~~~gr~~~~niiP~----~~g~~~~~~~~lpel~~~l~~ 235 (341)
||++|++++|+++|||+++.|+|+|++|+ + ++.+|.+++|++|+ .++.++++.|++ +++ +++
T Consensus 143 t~l~~~l~pL~~~~gI~~~~vtt~~a~s~-------p----~~~~~~~~~NiiP~~i~~~~~~~~ei~kil-~l~--v~~ 208 (337)
T 1cf2_P 143 TGLCRTLKPLHDSFGIKKVRAVIVRRGAD-------P----AQVSKGPINAIIPNPPKLPSHHGPDVKTVL-DIN--IDT 208 (337)
T ss_dssp HHHHHHHHHHHHHHCEEEEEEEEEEESSC-------T----TCTTCCCSSCCEESSSSSSCTHHHHHHTTS-CCC--EEE
T ss_pred HHHHHHHHHHHHhcCcceeEEEEEEEeec-------C----CccccchhcCEEeccCCCCCcchHHHHhhh-eeE--EEE
Confidence 99999999999999999999999999886 2 24557889999999 677889999999 885 999
Q ss_pred EEEEeeeeeEeeEEEEEEeCCCCCHHHHHHHHHHhhcCccccccc
Q 019445 236 MSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILG 280 (341)
Q Consensus 236 ~~~rVP~~~g~~~~l~v~l~~~~~~~ei~~~~~~a~~~~~~~il~ 280 (341)
+|+|||++|||+.++|++++++++.+|++++|+++ ||.+++.
T Consensus 209 t~~rVPv~~g~~~~~~v~l~~~~t~eei~~~~~~~---~~v~v~~ 250 (337)
T 1cf2_P 209 MAVIVPTTLMHQHNVMVEVEETPTVDDIIDVFEDT---PRVILIS 250 (337)
T ss_dssp EEEEESCCSCEEEEEEEEESSCCCHHHHHHHHHHS---TTEEEEC
T ss_pred EEEEcCccCeEEEEEEEEECCCCCHHHHHHHHHhC---CCcEEec
Confidence 99999999999999999999999999999999987 4555543
No 29
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=100.00 E-value=1.2e-44 Score=347.76 Aligned_cols=289 Identities=13% Similarity=0.056 Sum_probs=224.7
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEec
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 84 (341)
|+||||+|+ |++|++++|+|.+||++|++++++....+ .++++.||.|. +. . . +.+.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g------~~~~~~~~~~~-g~-----~-~-------~~~~-- 61 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAG------EPVHFVHPNLR-GR-----T-N-------LKFV-- 61 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTT------SBGGGTCGGGT-TT-----C-C-------CBCB--
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhC------chhHHhCchhc-Cc-----c-c-------cccc--
Confidence 589999997 99999999999999999999999863222 35678888776 21 0 1 1111
Q ss_pred CCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCC-CC-----------------Ceeeecc---Ccc
Q 019445 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-DA-----------------PMFVVGV---NEK 143 (341)
Q Consensus 85 ~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~-d~-----------------~~~V~Gv---n~~ 143 (341)
+.+ .| .++|+||+|+|++.+++.+++++++|+++|++|++++ +. ++++||+ |++
T Consensus 62 -~~~--~~--~~vDvV~~a~g~~~s~~~a~~~~~aG~~VId~Sa~~r~~~~~~y~~~y~~h~~~e~l~~~vygvpE~n~~ 136 (345)
T 2ozp_A 62 -PPE--KL--EPADILVLALPHGVFAREFDRYSALAPVLVDLSADFRLKDPELYRRYYGEHPRPDLLGRFVYAVPELYRE 136 (345)
T ss_dssp -CGG--GC--CCCSEEEECCCTTHHHHTHHHHHTTCSEEEECSSTTSCSCHHHHHHHHCCCSSGGGTTSSEECCHHHHHH
T ss_pred -chh--Hh--cCCCEEEEcCCcHHHHHHHHHHHHCCCEEEEcCccccCCChHHHHhhhccccchhhhccCcEeccccCHH
Confidence 222 36 3899999999999999999999999999999999876 22 4799999 889
Q ss_pred ccCCCCcEEeCCCCccceecchhHHHhhhccee--EEEEEEEeeccCccee-eeCCCCCCcccccccccccccccCChhH
Q 019445 144 EYKPELDIVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITATQKT-VDGPSMKDWRGGRAASFNIIPSSTGAAK 220 (341)
Q Consensus 144 ~~~~~~~iIsnp~C~tt~Lapllk~L~~~fgi~--~~~ittv~a~s~~~~~-~d~~s~~~~~~gr~~~~niiP~~~g~~~ 220 (341)
+++ .+++||||||||||++|++++|+++|+|+ ++.|+|+|++||+|+. +|..+ ++ .+..|++||.++.
T Consensus 137 ~i~-~~~iIanp~C~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~~-~~-----~~~~n~~py~~~~-- 207 (345)
T 2ozp_A 137 ALK-GADWIAGAGCNATATLLGLYPLLKAGVLKPTPIFVTLLISTSAGGAEASPASH-HP-----ERAGSIRVYKPTG-- 207 (345)
T ss_dssp HHH-TCSEEECCCHHHHHHHHHHHHHHHTTCBCSSCEEEEEEECSGGGCSSCCGGGC-HH-----HHTTCCEEEECSC--
T ss_pred Hhh-cCCEEeCCCcHHHHHHHHHHHHHHhcCCCCCeEEEEEEEEccccCcccccccc-ch-----hhccccccCCCCC--
Confidence 998 58999999999999999999999999999 9999999999999853 45432 12 3567999999884
Q ss_pred HHHHHhhhhc-----C-ceeEEEEEeeeeeEeeEEEEEEeCCCCCHHHHHHHHHHhhc-CcccccccC----CCcceeec
Q 019445 221 AVGKVLPALN-----G-KLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESE-GKLKGILGY----TEEDVVST 289 (341)
Q Consensus 221 ~~~~~lpel~-----~-~l~~~~~rVP~~~g~~~~l~v~l~~~~~~~ei~~~~~~a~~-~~~~~il~~----~~~~~vs~ 289 (341)
|+|+||++ + +++++|+|||++|||++++|++++++++.+||+++|+++|+ +||+++++- .+-|..-
T Consensus 208 --h~~~pei~~~l~~~~~v~~~~~rvP~~~g~~~~i~~~l~~~~t~eei~~~~~~~y~~~~~v~v~~~~~~~~~~p~~~- 284 (345)
T 2ozp_A 208 --HRHTAEVVENLPGRPEVHLTAIATDRVRGILMTAQCFVQDGWSERDVWQAYREAYAGEPFIRLVKQKKGVHRYPDPR- 284 (345)
T ss_dssp --CTHHHHHHHTSSSCCCEEEEEEECSCSSCEEEEEEEEBCTTCCHHHHHHHHHHHHTTCTTEEECCCSSSSCCSCCHH-
T ss_pred --ccChHhHHHHhCCCCCeEEEEEEeccccEEEEEEEEEeCCCCCHHHHHHHHHHHhCCCCCEEEEeCCCCcCCCCCHH-
Confidence 78999998 5 89999999999999999999999999999999999999998 699999832 1122211
Q ss_pred ccCCCcceeEEeCCCccee--cCCeEEEEEEeCCC-cchhhhHHHHHHHHhh
Q 019445 290 DFVGDSRSSIFDAKAGIAL--SKNFVKLVSWYDNE-WGYSSRVIDLIVHMAK 338 (341)
Q Consensus 290 d~~~~~~s~~~d~~~~~~~--~~~~~k~~~wydne-~gy~~r~~d~~~~~~~ 338 (341)
+..|.-+-.| + ... ..+.+.+++=-||= +|=|-+-+-.|+.|-.
T Consensus 285 ~~~g~~~~~i---g--~~~d~~~~~~~~~~~~DNl~kGAAg~Avq~~nl~~g 331 (345)
T 2ozp_A 285 FVQGTNYADI---G--FELEEDTGRLVVMTAIDNLVKGTAGHALQALNVRMG 331 (345)
T ss_dssp HHTTSCCEEE---E--EEEETTTTEEEEEEEECTTTTTTHHHHHHHHHHHTT
T ss_pred HhcCCceEEE---E--EEEeCCCCEEEEEEEeccHHHHHHHHHHHHHHHHhC
Confidence 2233222212 1 111 13556777778995 5766666666666654
No 30
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=100.00 E-value=5.9e-45 Score=350.63 Aligned_cols=302 Identities=20% Similarity=0.185 Sum_probs=222.1
Q ss_pred CceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC-CCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEE
Q 019445 5 KKIKIGINGF-GRIGRLVARVALQRDDVELVAVND-PFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (341)
Q Consensus 5 ~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~-~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 82 (341)
+|+||||+|+ ||+|++++|+|.+||++||+++++ .+..++ .+++.|+.+. . + .+.+++..+.+
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~------~~~~~~~~~~-~------~-~~~~~~~~~~~- 67 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGK------KYKDAVKWIE-Q------G-DIPEEVQDLPI- 67 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTS------BHHHHCCCCS-S------S-SCCHHHHTCBE-
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCC------CHHHhcCccc-c------c-ccccCCceeEE-
Confidence 4689999997 999999999999999999999983 322222 3567776552 0 0 11111112222
Q ss_pred ecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCC---CCCeeeeccCccccCC----------CC
Q 019445 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK---DAPMFVVGVNEKEYKP----------EL 149 (341)
Q Consensus 83 ~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~---d~~~~V~Gvn~~~~~~----------~~ 149 (341)
.+.+++. | .++|+||+|||++.+++.++.++++|+++|++|++++ +.|.+++|+|++.|.. ++
T Consensus 68 ~~~d~~~--~--~~vDvVf~atp~~~s~~~a~~~~~aG~~VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~~~ 143 (350)
T 2ep5_A 68 VSTNYED--H--KDVDVVLSALPNELAESIELELVKNGKIVVSNASPFRMDPDVPLINPEINWEHLELLKFQKERKGWKG 143 (350)
T ss_dssp ECSSGGG--G--TTCSEEEECCCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCHHHHGGGGGGHHHHHHHHTCSS
T ss_pred eeCCHHH--h--cCCCEEEECCChHHHHHHHHHHHHCCCEEEECCccccCCCCCCeeCCccCHHHhcChHhhhhhcccCc
Confidence 2233433 5 3899999999999999999999999999999988875 5789999999887752 35
Q ss_pred cEEeCCCCccceecchhHHHhhhcceeEEEEEEEeeccCcceeeeCCCCCCcccccccccccccccCCh-hH---HHHHH
Q 019445 150 DIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGA-AK---AVGKV 225 (341)
Q Consensus 150 ~iIsnp~C~tt~Lapllk~L~~~fgi~~~~ittv~a~s~~~~~~d~~s~~~~~~gr~~~~niiP~~~g~-~~---~~~~~ 225 (341)
++||||||||||++|++++|+++|||+++.++|+|++||+|+. +. ..+.+++|++||+++. ++ |+.|+
T Consensus 144 ~iIanpgC~tt~~~l~l~pL~~~~gi~~i~v~t~~~~SGaG~~--~~------~~~~~~~ni~py~~~~e~k~~~E~~~~ 215 (350)
T 2ep5_A 144 ILVKNPNCTAAIMSMPIKPLIEIATKSKIIITTLQAVSGAGYN--GI------SFMAIEGNIIPYIKGEEDKIAKELTKL 215 (350)
T ss_dssp EEEECCCHHHHHHHHHHGGGHHHHHTSEEEEEEEECGGGGCSS--SS------BHHHHTTCCBCCCTTHHHHHHHHHHHH
T ss_pred eEEEcCchHHHHHHHHHHHHHHhcCCcEEEEEEEEecCcCCCC--CC------CChHHhCCEEeccCCcchHHHHHHHHH
Confidence 7999999999999999999999999999999999999998874 22 2457789999999985 44 34677
Q ss_pred hhhhcC--------ceeEEEEEeeeeeEeeEEEEEEeCCCCCHHHHHHHHHHhhc-----------CcccccccCCCcce
Q 019445 226 LPALNG--------KLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESE-----------GKLKGILGYTEEDV 286 (341)
Q Consensus 226 lpel~~--------~l~~~~~rVP~~~g~~~~l~v~l~~~~~~~ei~~~~~~a~~-----------~~~~~il~~~~~~~ 286 (341)
+|+++| +++++|+|||++|||++++|++++++++.+||+++|+++|+ +||++++...+-|.
T Consensus 216 l~~~~g~~~~~~~~~v~~t~~rvP~~~g~~~~i~~~l~~~~t~eei~~~~~~~~~~~~~~~~~~~~~~fv~v~~~~~~P~ 295 (350)
T 2ep5_A 216 NGKLENNQIIPANLDSTVTSIRVPTRVGHMGVINIVTNERINIEEIKKTLKNFKSLPQQKNLPTAPKQPIIVRDEEDRPQ 295 (350)
T ss_dssp TCEECSSSEECCCCEEEEEEEECSCSSCEEEEEEEECCSCCCHHHHHHHHHTCCCHHHHTTCTTCCSCSEEECCSTTCCC
T ss_pred HhhccccccccccccEEEEeEEecccceEEEEEEEEECCCCCHHHHHHHHHHhhccccccccCCCCCCcEEECCCCCCCc
Confidence 887765 79999999999999999999999999999999999999995 48888875333332
Q ss_pred eec--ccCCCcceeEEeCCCcceecCCeEEEEEEeCCC-cchhhhHHHHHHHHh
Q 019445 287 VST--DFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNE-WGYSSRVIDLIVHMA 337 (341)
Q Consensus 287 vs~--d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne-~gy~~r~~d~~~~~~ 337 (341)
.-. +-++ ...+.+ + ....+.+.+.+++=-||= +|=|-+-+-.|+.|-
T Consensus 296 ~~~~~~~~~-~~~~~v--g-r~~~d~~~l~~~~~~DNl~kGAAg~Avqn~nl~~ 345 (350)
T 2ep5_A 296 PIIDVNAES-GMAVTV--G-RIRHENNVLRLVVLGDNLVRGAAGITILTVEVMK 345 (350)
T ss_dssp HHHHTTHHH-HTSEEE--E-EEEEETTEEEEEEEECTTTTTTHHHHHHHHHHHH
T ss_pred eEEecccCC-CceEEE--E-EEEecCCEEEEEEEeccHHHhHHHHHHHHHHHHH
Confidence 111 1111 001111 0 011122346666668995 465555555555554
No 31
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=100.00 E-value=3.2e-44 Score=342.72 Aligned_cols=289 Identities=15% Similarity=0.133 Sum_probs=225.2
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeCCC---CChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEE
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDDVELVAVNDPF---ISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAV 81 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~~~---~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v 81 (341)
|+||+|+|+ |++|++++|+|.+||++|++.+.+.+ ..++.+ ...|+.|. +.. . +.+
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~------~~~~p~~~-~~~------~-------~~v 63 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLI------SDLHPQLK-GIV------E-------LPL 63 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBH------HHHCGGGT-TTC------C-------CBE
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCch------HHhCcccc-Ccc------c-------eeE
Confidence 479999999 99999999999999999999998764 333322 23455554 210 1 111
Q ss_pred EecC-CCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCC--C--C---------------Ceeeecc-
Q 019445 82 FGFR-NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK--D--A---------------PMFVVGV- 140 (341)
Q Consensus 82 ~~~~-~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~--d--~---------------~~~V~Gv- 140 (341)
++. ++++ | ..++|+||+|+|++.+++.+++++++|+|+||+|++++ | . +++|||+
T Consensus 64 -~~~~~~~~--~-~~~~Dvvf~a~p~~~s~~~~~~~~~~g~~vIDlSa~fR~~d~~v~~~wy~~~~~~p~l~~~~vyglP 139 (337)
T 3dr3_A 64 -QPMSDISE--F-SPGVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLA 139 (337)
T ss_dssp -EEESSGGG--T-CTTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTSSSCHHHHHHHTSSCCSCHHHHHHCEECCT
T ss_pred -eccCCHHH--H-hcCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCccccCCcccchhhccccccChhhhcceEEEcc
Confidence 111 2222 2 14899999999999999999999999999999999986 2 2 1578999
Q ss_pred --CccccCCCCcEEeCCCCccceecchhHHHhh--hcceeEE-EEEEEeeccCcc-eeeeCCCCCCcccccccccccccc
Q 019445 141 --NEKEYKPELDIVSNASCTTNCLAPLAKVIHD--KFGIVEG-LMTTVHSITATQ-KTVDGPSMKDWRGGRAASFNIIPS 214 (341)
Q Consensus 141 --n~~~~~~~~~iIsnp~C~tt~Lapllk~L~~--~fgi~~~-~ittv~a~s~~~-~~~d~~s~~~~~~gr~~~~niiP~ 214 (341)
|+++++ ++++||||||||||++++|++|++ .|+++++ .++|+|++||++ ..+|+.+ .+++ |++||
T Consensus 140 Evn~~~i~-~~~iIanPgC~tt~~~l~L~PL~~~g~~~~~~i~~v~t~~g~SGaG~~~~~~~~-~~~~-------n~~py 210 (337)
T 3dr3_A 140 EWCGNKLK-EANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVINATSGVSGAGRKAAISNS-FCEV-------SLQPY 210 (337)
T ss_dssp TTCCHHHH-TCSEEECCCHHHHHHHHHHHHHHHTTCBCTTSCCEEEEEECGGGGCSCCCSTTS-GGGC-------SEEEC
T ss_pred ccCHHHhC-CCCEEecCChHHHHHHHHHHHHHHcCccCCCceEEEEEeeccccCCcccccccc-cccc-------ceEcc
Confidence 888887 589999999999999999999998 6999999 999999999986 4445433 2322 89999
Q ss_pred cCChhHHHHHHhhhhcC----ceeEEEEEeeeeeEeeEEEEEEeCCCCCHHHHHHHHHHhhc-CcccccccCCCcceeec
Q 019445 215 STGAAKAVGKVLPALNG----KLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESE-GKLKGILGYTEEDVVST 289 (341)
Q Consensus 215 ~~g~~~~~~~~lpel~~----~l~~~~~rVP~~~g~~~~l~v~l~~~~~~~ei~~~~~~a~~-~~~~~il~~~~~~~vs~ 289 (341)
..+. |||+||+++ +++++|+|||++|||+++++++++++++.+||+++|+++|+ +||++++...+ |.. .
T Consensus 211 ~~~~----h~h~Pei~~~l~~~v~ft~~rvPv~rG~~~ti~~~l~~~~t~eev~~~l~~~Y~~~p~V~v~~~~~-P~~-~ 284 (337)
T 3dr3_A 211 GVFT----HRHQPEIATHLGADVIFTPHLGNFPRGILETITCRLKSGVTQAQVAQALQQAYAHKPLVRLYDKGV-PAL-K 284 (337)
T ss_dssp STTT----CTHHHHHHHHHTSCCEEEEEEESSSSCEEEEEEEEBCTTCCHHHHHHHHHHHHTTCTTEEECSSSC-CCG-G
T ss_pred Cccc----ceechhHHhhhcCCEEEEEEEecccccEEEEEEEEECCCCCHHHHHHHHHHHhCCCCCEEECCCCC-CCH-H
Confidence 9885 789999998 89999999999999999999999999999999999999998 59999986433 432 2
Q ss_pred ccCCCcceeEEeCCCcceecCCeEEEEEEeCC-CcchhhhHHHHHHHHhh
Q 019445 290 DFVGDSRSSIFDAKAGIALSKNFVKLVSWYDN-EWGYSSRVIDLIVHMAK 338 (341)
Q Consensus 290 d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydn-e~gy~~r~~d~~~~~~~ 338 (341)
+..|.-+-.|- ...+++.+.+++..|| -+|=|-+-+-.|+.|-.
T Consensus 285 ~v~gtn~~~ig-----~~~~~~~l~~~~~~DNL~KGAAgqAVQ~~nlm~g 329 (337)
T 3dr3_A 285 NVVGLPFCDIG-----FAVQGEHLIIVATEDNLLKGAAAQAVQCANIRFG 329 (337)
T ss_dssp GTTTSSCEEEE-----EEEETTEEEEEEEECTTTTTTHHHHHHHHHHHHT
T ss_pred HhCCCCcEEEE-----EEEeCCEEEEEEEechHHHHHHHHHHHHHHHHhC
Confidence 44444432221 1122567888888999 67888888888887754
No 32
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=100.00 E-value=1.1e-43 Score=342.11 Aligned_cols=309 Identities=18% Similarity=0.192 Sum_probs=223.0
Q ss_pred CCCC-CceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEE
Q 019445 1 MAGD-KKIKIGINGF-GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKP 78 (341)
Q Consensus 1 ~~~~-~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~ 78 (341)
|..| +++||||+|+ ||+|++|+|+|.+||++||+.+.+.+..++.+...+.+. .++.++ ... . .+
T Consensus 1 ~~~M~~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~-~~~~~~-~~~----~-~~------ 67 (359)
T 4dpk_A 1 MILMRRTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQ-TVGQVP-KEI----A-DM------ 67 (359)
T ss_dssp -----CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCC-SSSCCC-HHH----H-TC------
T ss_pred CCcCCCCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccc-cccccc-ccc----c-cc------
Confidence 4444 4689999999 999999999999999999999988755555443221100 011111 000 0 11
Q ss_pred EEEEecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCC---CCCeeeeccCccccCC--C-----
Q 019445 79 VAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK---DAPMFVVGVNEKEYKP--E----- 148 (341)
Q Consensus 79 i~v~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~---d~~~~V~Gvn~~~~~~--~----- 148 (341)
.+ ++.+++. | .++|+||+|+|++.+++.+++++++|+++||+|++++ +.|..++++|+++++. .
T Consensus 68 -~v-~~~~~~~--~--~~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~ 141 (359)
T 4dpk_A 68 -EI-KPTDPKL--M--DDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRR 141 (359)
T ss_dssp -BC-EECCGGG--C--TTCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHH
T ss_pred -eE-EeCCHHH--h--cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhccccc
Confidence 11 1123332 3 3899999999999999999999999999999999987 4789999999998842 1
Q ss_pred ---CcEEeCCCCccceecchhHHHhhhcceeEEEEEEEeeccCcceeeeCCCCCCcccccccccccccccCCh-hH---H
Q 019445 149 ---LDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGA-AK---A 221 (341)
Q Consensus 149 ---~~iIsnp~C~tt~Lapllk~L~~~fgi~~~~ittv~a~s~~~~~~d~~s~~~~~~gr~~~~niiP~~~g~-~~---~ 221 (341)
.++||||||||||++|+|++|+++|||+++.++|+|++||+|+. +.+ .+.+++|++||.++. .+ |
T Consensus 142 ~~~~~iIanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~--~~~------~~~~~~N~ipy~~~~e~k~~~E 213 (359)
T 4dpk_A 142 EWKGFIVTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGYP--GIP------SLDVVDNILPLGDGYDAKTIKE 213 (359)
T ss_dssp TCSSEEEECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEECSGGGCSS--CSB------GGGTTTCCEECCHHHHHHHHHH
T ss_pred ccCccEEECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCCc--Ccc------ChHHhCCeEeecCcHHHHHHHH
Confidence 36999999999999999999999999999999999999998874 221 246788999999875 33 4
Q ss_pred HHHHhhhhcC----------ceeEEEEEeeeeeEeeEEEEEEeCCCCCHHHHHHHHHHhhc-----------Cccccccc
Q 019445 222 VGKVLPALNG----------KLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESE-----------GKLKGILG 280 (341)
Q Consensus 222 ~~~~lpel~~----------~l~~~~~rVP~~~g~~~~l~v~l~~~~~~~ei~~~~~~a~~-----------~~~~~il~ 280 (341)
+.++++++.+ +++++|+|||++|||+++++++++++++.+||+++|+++|+ +||++++.
T Consensus 214 i~kil~~l~g~~~~~~~~~~~v~~t~~rVPv~rG~~~tv~v~l~~~~t~eei~~~l~~~~~~~~~~~l~~~p~~fV~v~~ 293 (359)
T 4dpk_A 214 IFRILSEVKRNVDEPKLEDVSLAATTHRIATIHGHYEVLYVSFKEETAAEKVKETLENFRGEPQDLKLPTAPSKPIIVMN 293 (359)
T ss_dssp HHHHHHTSCCSCCCSCGGGCEEEEEEEECSCSSCEEEEEEEEESSCCCHHHHHHHHHTCCCHHHHTTCTTCCSCSEEECC
T ss_pred HHHHHhhcccccccccccCCceEEEEEEecccccEEEEEEEEECCCCCHHHHHHHHHHhhcccccccccCCCCccEEEcC
Confidence 6777776654 68999999999999999999999999999999999999987 57777765
Q ss_pred CCCcceeecc--cCCC-cceeEEeCCCcceecCCeEEEEEEeCCC-cchhhhHHHHHHHHhh
Q 019445 281 YTEEDVVSTD--FVGD-SRSSIFDAKAGIALSKNFVKLVSWYDNE-WGYSSRVIDLIVHMAK 338 (341)
Q Consensus 281 ~~~~~~vs~d--~~~~-~~s~~~d~~~~~~~~~~~~k~~~wydne-~gy~~r~~d~~~~~~~ 338 (341)
-.+.|..-.+ -++. ...+.+- ... ..+++.+.+++=-||= +|=|-.-+-.++.|.+
T Consensus 294 ~~~~P~~~~~~g~~~~~~~~~~Vg-r~r-~~~~~~l~~~~~~DNL~KGAAg~AVQn~nl~~~ 353 (359)
T 4dpk_A 294 EDTRPQVYFDRWAGDIPGMSVVVG-RLK-QVNKRMIRLVSLIHNTVRGAAGGGILAAELLVE 353 (359)
T ss_dssp STTCCCHHHHTTCTTTTTCSEEEE-EEE-EEETTEEEEEEEECTTTTTTHHHHHHHHHHHHH
T ss_pred CCCCCCHHHhhccCCCcCCeEEEE-EEE-EcCCCEEEEEEEEhhhhHhHHHHHHHHHHHHHH
Confidence 4333432212 1210 1112111 000 0235667888889994 5766666666666644
No 33
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=100.00 E-value=1.1e-43 Score=342.11 Aligned_cols=309 Identities=18% Similarity=0.192 Sum_probs=222.8
Q ss_pred CCCC-CceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEE
Q 019445 1 MAGD-KKIKIGINGF-GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKP 78 (341)
Q Consensus 1 ~~~~-~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~ 78 (341)
|..| +++||||+|+ ||+|++|+|+|.+||++||+.+.+.+..++.+...+.+. .++.++ ... . .+
T Consensus 1 ~~~M~~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~-~~~~~~-~~~----~-~~------ 67 (359)
T 4dpl_A 1 MILMRRTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQ-TVGQVP-KEI----A-DM------ 67 (359)
T ss_dssp -----CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCC-SSSCCC-HHH----H-TC------
T ss_pred CCcCCCCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccc-cccccc-ccc----c-cc------
Confidence 4444 4689999999 999999999999999999999988755555443221100 011111 000 0 11
Q ss_pred EEEEecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCC---CCCeeeeccCccccCC--C-----
Q 019445 79 VAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK---DAPMFVVGVNEKEYKP--E----- 148 (341)
Q Consensus 79 i~v~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~---d~~~~V~Gvn~~~~~~--~----- 148 (341)
.+ ++.+++. | .++|+||+|+|++.+++.+++++++|+++||+|++++ +.|..++++|+++++. .
T Consensus 68 -~v-~~~~~~~--~--~~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~ 141 (359)
T 4dpl_A 68 -EI-KPTDPKL--M--DDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRR 141 (359)
T ss_dssp -BC-EECCGGG--C--TTCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHH
T ss_pred -eE-EeCCHHH--h--cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhccccc
Confidence 11 1123332 3 3899999999999999999999999999999999987 4789999999998842 1
Q ss_pred ---CcEEeCCCCccceecchhHHHhhhcceeEEEEEEEeeccCcceeeeCCCCCCcccccccccccccccCCh-hH---H
Q 019445 149 ---LDIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGA-AK---A 221 (341)
Q Consensus 149 ---~~iIsnp~C~tt~Lapllk~L~~~fgi~~~~ittv~a~s~~~~~~d~~s~~~~~~gr~~~~niiP~~~g~-~~---~ 221 (341)
.++||||||||||++|+|++|+++|||+++.++|+|++||+|+. +.+ .+.+++|++||.++. .+ |
T Consensus 142 ~~~~~iIanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~--~~~------~~~~~~N~ipy~~~~e~k~~~E 213 (359)
T 4dpl_A 142 EWKGFIVTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGYP--GIP------SLDVVDNILPLGDGYDAKTIKE 213 (359)
T ss_dssp TCSSEEEECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEBCGGGGCSS--CSB------HHHHTTCCEECCHHHHHHHHHH
T ss_pred ccCccEEECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCCc--Ccc------ChHHhCCeEeecCcHHHHHHHH
Confidence 36999999999999999999999999999999999999998774 221 256789999999875 33 4
Q ss_pred HHHHhhhhcC----------ceeEEEEEeeeeeEeeEEEEEEeCCCCCHHHHHHHHHHhhc-----------Cccccccc
Q 019445 222 VGKVLPALNG----------KLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESE-----------GKLKGILG 280 (341)
Q Consensus 222 ~~~~lpel~~----------~l~~~~~rVP~~~g~~~~l~v~l~~~~~~~ei~~~~~~a~~-----------~~~~~il~ 280 (341)
+.++++++.+ +++++|+|||++|||+++++++++++++.+||+++|+++|+ +||++++.
T Consensus 214 i~kil~~l~g~~~~~~~~~~~v~~t~~rVPv~rG~~~tv~v~l~~~~t~eei~~~l~~~~~~~~~~~l~~~p~~fV~v~~ 293 (359)
T 4dpl_A 214 IFRILSEVKRNVDEPKLEDVSLAATTHRIATIHGHYEVLYVSFKEETAAEKVKETLENFRGEPQDLKLPTAPSKPIIVMN 293 (359)
T ss_dssp HHHHHTTSCCSSCCSCGGGCEEEEECEECSCSSCEEEEEEEEESSCCCHHHHHHHHHTCCCHHHHTTCTTCCSCSEEEEC
T ss_pred HHHHHhhcccccccccccCCceEEEEEEecccccEEEEEEEEECCCCCHHHHHHHHHHhhcccccccccCCCCccEEEcC
Confidence 6777776654 68999999999999999999999999999999999999987 57777765
Q ss_pred CCCcceeecc--cCCC-cceeEEeCCCcceecCCeEEEEEEeCCC-cchhhhHHHHHHHHhh
Q 019445 281 YTEEDVVSTD--FVGD-SRSSIFDAKAGIALSKNFVKLVSWYDNE-WGYSSRVIDLIVHMAK 338 (341)
Q Consensus 281 ~~~~~~vs~d--~~~~-~~s~~~d~~~~~~~~~~~~k~~~wydne-~gy~~r~~d~~~~~~~ 338 (341)
-.+.|..-.+ -++. ...+.+- ... ..+++.+.+++=-||= +|=|-.-+-.++.|.+
T Consensus 294 ~~~~P~~~~~~g~~~~~~~~~~Vg-r~r-~~~~~~l~~~~~~DNL~KGAAg~AVQn~nl~~~ 353 (359)
T 4dpl_A 294 EDTRPQVYFDRWAGDIPGMSVVVG-RLK-QVNKRMIRLVSLIHNTVRGAAGGGILAAELLVE 353 (359)
T ss_dssp STTCCCHHHHTTCTTTTTCSEEEE-EEE-EEETTEEEEEEEECTTTTTTHHHHHHHHHHHHH
T ss_pred CCCCCCHHHhhccCCCcCCeEEEE-EEE-EcCCCEEEEEEEEhhhhHhHHHHHHHHHHHHHH
Confidence 4333432212 1210 1112111 000 0235667888889994 5766666666666644
No 34
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.2e-43 Score=340.03 Aligned_cols=239 Identities=17% Similarity=0.253 Sum_probs=186.2
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEecC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 85 (341)
|+||||+|||++|++++|+|.+||++||++|++.. .+..+++++++. ++.+. .. ... .+ +.+..+.+..
T Consensus 1 ~ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~--~~~~~~~a~~~g-~~~~~-~~---~~~-~~-~~~~~v~v~~-- 69 (340)
T 1b7g_O 1 MVNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTS--PNYEAFIAHRRG-IRIYV-PQ---QSI-KK-FEESGIPVAG-- 69 (340)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSS--CSHHHHHHHHTT-CCEEC-CG---GGH-HH-HHTTTCCCCC--
T ss_pred CeEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCC--hHHHHHHHHhcC-cceec-Cc---CHH-HH-hccccccccc--
Confidence 47999999999999999999999999999999973 344445544321 00110 00 000 00 0000010000
Q ss_pred CCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCCC--CCeeeeccCccccCCCCcEEeCCCCccceec
Q 019445 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKD--APMFVVGVNEKEYKPELDIVSNASCTTNCLA 163 (341)
Q Consensus 86 ~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~d--~~~~V~Gvn~~~~~~~~~iIsnp~C~tt~La 163 (341)
+++++ + .++|+||+|||++.+++.++.|+++|+|+|++|++.++ .+++++|+|++++. +.++||||||+||||+
T Consensus 70 ~~e~l-~--~~vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~sa~~~~~~~~~~v~~vN~~~~~-~~~iIsnpsCtt~~l~ 145 (340)
T 1b7g_O 70 TVEDL-I--KTSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEKAEVADISFSALCNYNEAL-GKKYIRVVSCNTTALL 145 (340)
T ss_dssp CHHHH-H--HHCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSCGGGSSCEECHHHHHHHHT-TCSEEEECCHHHHHHH
T ss_pred CHhHh-h--cCCCEEEECCCCchhHHHHHHHHHcCCeEEEeCCCCCCCCCCEEEcCcchHHHc-CCCCcccCCcHHHHHH
Confidence 11111 1 26899999999999999999999999999999999774 47999999976665 4579999999999999
Q ss_pred chhHHHhhhcceeEEEEEEEeeccCcceeeeCCCCCCcccccccccccccc----cCChhHHHHHHhhhhcCceeEEEEE
Q 019445 164 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPS----STGAAKAVGKVLPALNGKLTGMSFR 239 (341)
Q Consensus 164 pllk~L~~~fgi~~~~ittv~a~s~~~~~~d~~s~~~~~~gr~~~~niiP~----~~g~~~~~~~~lpel~~~l~~~~~r 239 (341)
|++|+|+++|||+++.|||+|+++. + +++ .|.+..|++|+ .++.++++.+++|+++ ++++|+|
T Consensus 146 ~~lk~L~~~~gI~~~~~tt~~~~~~-------~-~~~---~~~~~~niip~~~~i~t~~a~ev~~vlp~l~--l~~~a~r 212 (340)
T 1b7g_O 146 RTICTVNKVSKVEKVRATIVRRAAD-------Q-KEV---KKGPINSLVPDPATVPSHHAKDVNSVIRNLD--IATMAVI 212 (340)
T ss_dssp HHHHHHHTTSCEEEEEEEEEEESSC-------T-TCC---SCCCSSCCEESSSSSSCTHHHHHHTTSTTCE--EEEEEEE
T ss_pred HHHHHHHHhCCeEEEEEEEEeccCC-------c-ccc---hHHHHcCCCCCCcCCCCCchhHHHHhCCCCc--EEEEEEE
Confidence 9999999999999999999998753 2 222 35677889977 5788999999999997 9999999
Q ss_pred eeeeeEeeEEEEEEeCCCCCHHHHHHHHHHhhc
Q 019445 240 VPTVDVSVVDLTVRLEKEATYEEIKNAIKEESE 272 (341)
Q Consensus 240 VP~~~g~~~~l~v~l~~~~~~~ei~~~~~~a~~ 272 (341)
||+++||+.+++++++++++.|||+++|++++.
T Consensus 213 VPv~~gh~~~l~v~l~~~~t~eei~~~l~~a~~ 245 (340)
T 1b7g_O 213 APTTLMHMHFINITLKDKVEKKDILSVLENTPR 245 (340)
T ss_dssp ESCSSCEEEEEEEEESSCCCHHHHHHHHHTCTT
T ss_pred eccCCeEEEEEEEEECCCCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999997654
No 35
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1.3e-43 Score=341.87 Aligned_cols=300 Identities=20% Similarity=0.192 Sum_probs=214.8
Q ss_pred CceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC-CCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEE
Q 019445 5 KKIKIGINGF-GRIGRLVARVALQRDDVELVAVND-PFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (341)
Q Consensus 5 ~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~-~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 82 (341)
||+||||+|+ |++|++++|+|.+||++||+++++ ....++ .+++.|+.+. .. .+..++..+.+
T Consensus 7 M~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~------~~~~~~~~~~-~~-------~~~~~~~~~~~- 71 (354)
T 1ys4_A 7 MKIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGK------KYKDACYWFQ-DR-------DIPENIKDMVV- 71 (354)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTS------BHHHHSCCCC-SS-------CCCHHHHTCBC-
T ss_pred ccceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccc------cHHHhccccc-cc-------ccccCceeeEE-
Confidence 3589999997 999999999999999999999984 423333 2456666552 10 00000111111
Q ss_pred ecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCC---CCCeeeeccCccccCC----------CC
Q 019445 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK---DAPMFVVGVNEKEYKP----------EL 149 (341)
Q Consensus 83 ~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~---d~~~~V~Gvn~~~~~~----------~~ 149 (341)
.+.++++ |...++|+||+|||++.+++.++.++++|+++|+.|++++ +.|.+++++|++.|.. ++
T Consensus 72 ~~~~~~~--~~~~~~DvV~~atp~~~~~~~a~~~~~aG~~VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~~~ 149 (354)
T 1ys4_A 72 IPTDPKH--EEFEDVDIVFSALPSDLAKKFEPEFAKEGKLIFSNASAYRMEEDVPLVIPEVNADHLELIEIQREKRGWDG 149 (354)
T ss_dssp EESCTTS--GGGTTCCEEEECCCHHHHHHHHHHHHHTTCEEEECCSTTTTCTTSCBCCHHHHGGGGGHHHHHHHHHCCSS
T ss_pred EeCCHHH--HhcCCCCEEEECCCchHHHHHHHHHHHCCCEEEECCchhcCCCCCCccCcccCHHHhcChhhhhhhcccCC
Confidence 2224444 5323899999999999999999999999999888887765 4789999999887752 34
Q ss_pred cEEeCCCCccceecchhHHHhhhcceeEEEEEEEeeccCcceeeeCCCCCCcccccccccccccccCChhHHHHHHhhhh
Q 019445 150 DIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPAL 229 (341)
Q Consensus 150 ~iIsnp~C~tt~Lapllk~L~~~fgi~~~~ittv~a~s~~~~~~d~~s~~~~~~gr~~~~niiP~~~g~~~~~~~~lpel 229 (341)
++||||||||||++|++++|+++|||+++.++|+|++||+|+. +. ..+.+++|++||.++. .|||+||+
T Consensus 150 ~iIanpgC~tt~~~l~l~pL~~~~gi~~~~v~t~~~~SGaG~~--~~------~~~~~~~ni~py~~~~---~~k~~~Ei 218 (354)
T 1ys4_A 150 AIITNPNCSTICAVITLKPIMDKFGLEAVFIATMQAVSGAGYN--GV------PSMAILDNLIPFIKNE---EEKMQTES 218 (354)
T ss_dssp EEEECCCHHHHHHHHHHHHHHHHHCCSEEEEEEEBCSGGGCTT--TS------CHHHHTTCCBSCCTTH---HHHHHHHH
T ss_pred eEEECCCHHHHHHHHHHHHHHHhcCCcEEEEEEEEEcCcCCcc--cc------cchHHhCCEEeccCch---hhHHHHHH
Confidence 6999999999999999999999999999999999999998774 22 1356788999999874 35555555
Q ss_pred cC---------------ceeEEEEEeeeeeEeeEEEEEEeCCCCCHHHHHHHHHHhhc---------CcccccccCCCcc
Q 019445 230 NG---------------KLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESE---------GKLKGILGYTEED 285 (341)
Q Consensus 230 ~~---------------~l~~~~~rVP~~~g~~~~l~v~l~~~~~~~ei~~~~~~a~~---------~~~~~il~~~~~~ 285 (341)
++ +++++++|||++|||++++|++++++++.+||+++|+++|+ +||++++.-...|
T Consensus 219 ~~~l~~~~g~~~~~~~~~v~~~~~rvP~~~G~~~~i~~~l~~~~t~eei~~~~~~~~~~~~~~~~~~~~fv~v~~~~~~p 298 (354)
T 1ys4_A 219 LKLLGTLKDGKVELANFKISASCNRVAVIDGHTESIFVKTKEGAEPEEIKEVMDKFDPLKDLNLPTYAKPIVIREEIDRP 298 (354)
T ss_dssp HHHTSEEETTEEECCCCEEEEECCBCSCSSCEEEEEEEECSSCCCHHHHHHHHHHCCTTTTSCCTTCCCSEEECCSTTCC
T ss_pred HHHHhccccccccCCCceEEEEEEEecccceEEEEEEEEECCCCCHHHHHHHHHHhhccccccccCCCCcEEEecCCCCC
Confidence 32 68899999999999999999999999999999999999995 4888887532223
Q ss_pred eeec--ccCCCcceeEEeCCCcceecC-CeEEEEEEeCCC-cchhhhHHHHHHHH
Q 019445 286 VVST--DFVGDSRSSIFDAKAGIALSK-NFVKLVSWYDNE-WGYSSRVIDLIVHM 336 (341)
Q Consensus 286 ~vs~--d~~~~~~s~~~d~~~~~~~~~-~~~k~~~wydne-~gy~~r~~d~~~~~ 336 (341)
..-. +-++ ...+.+.. ...+. +.+.+++=-||= +|=|-+-+-.|+.|
T Consensus 299 ~~~~~~~~~~-~~~~~vgr---~~~~~~~~~~~~~~~DNl~kGAAg~Avqn~nl~ 349 (354)
T 1ys4_A 299 QPRLDRNEGN-GMSIVVGR---IRKDPIFDVKYTALEHNTIRGAAGASVLNAEYF 349 (354)
T ss_dssp CHHHHTTGGG-GTSEEEEE---EEECSSSSEEEEEEECTTTTTTHHHHHHHHHHH
T ss_pred CceeecccCC-CceEEEee---EeeCCCCeEEEEEEehhhHHhHHHHHHHHHHHH
Confidence 2211 1111 11222220 01111 236676778985 45555544444444
No 36
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=100.00 E-value=2.6e-42 Score=334.07 Aligned_cols=307 Identities=19% Similarity=0.183 Sum_probs=211.4
Q ss_pred CCCceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEee-CCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEE
Q 019445 3 GDKKIKIGINGF-GRIGRLVARVALQRDDVELVAVN-DPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVA 80 (341)
Q Consensus 3 ~~~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~-~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~ 80 (341)
.|+|+||||+|+ ||+|++++|+|.+||++||+.+. +.+..++.+.. .|+.+. .. .+..+.+.+.
T Consensus 16 ~M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~------~~~~~~--~~------~~p~~~~~~~ 81 (381)
T 3hsk_A 16 HMSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKD------AASWKQ--TE------TLPETEQDIV 81 (381)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHH------HCCCCC--SS------CCCHHHHTCB
T ss_pred cCCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHH------hccccc--cc------ccccccccce
Confidence 467799999999 99999999999999999999885 44344443322 221111 00 0000000011
Q ss_pred EEecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCC---CCCeeeeccCccccC-----------
Q 019445 81 VFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK---DAPMFVVGVNEKEYK----------- 146 (341)
Q Consensus 81 v~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~---d~~~~V~Gvn~~~~~----------- 146 (341)
+++.++++ .| .++|+||+|+|++.+++.+++++++|+++||+|++++ |.|++++++|++.|.
T Consensus 82 -v~~~~~~~-~~--~~~Dvvf~alp~~~s~~~~~~~~~~G~~VIDlSa~fR~~~~vplvv~~vn~~~~~l~E~~r~~~~~ 157 (381)
T 3hsk_A 82 -VQECKPEG-NF--LECDVVFSGLDADVAGDIEKSFVEAGLAVVSNAKNYRREKDVPLVVPIVNPEHIDVVENKVKQAVS 157 (381)
T ss_dssp -CEESSSCT-TG--GGCSEEEECCCHHHHHHHHHHHHHTTCEEEECCSTTTTCTTSCEECTTTCGGGGHHHHHHHHHHHH
T ss_pred -EEeCchhh-hc--ccCCEEEECCChhHHHHHHHHHHhCCCEEEEcCCcccCCCCCcEEecccCHHHcCCHhhhhhhhcc
Confidence 12223331 24 3899999999999999999999999999999999987 478999999987663
Q ss_pred ----CCCcEEeCCCCccceecchhHHHhhhcc-eeEEEEEEEeeccCcceeeeCCCCCCcccccccccccccccCChh--
Q 019445 147 ----PELDIVSNASCTTNCLAPLAKVIHDKFG-IVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAA-- 219 (341)
Q Consensus 147 ----~~~~iIsnp~C~tt~Lapllk~L~~~fg-i~~~~ittv~a~s~~~~~~d~~s~~~~~~gr~~~~niiP~~~g~~-- 219 (341)
++.++||||||||||+++.|++|+++|| |++..++|+|++||+++.. +. ..+.+++|++||..+..
T Consensus 158 ~~~i~~~~iIaNPgC~tt~~~laL~PL~~~~glI~~v~v~t~~gvSGAG~~~----~~---~~~~~~~N~~Py~~~~e~k 230 (381)
T 3hsk_A 158 KGGKKPGFIICISNCSTAGLVAPLKPLVEKFGPIDALTTTTLQAISGAGFSP----GV---SGMDILDNIVPYISGEEDK 230 (381)
T ss_dssp TTCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCEEEEEEEEEBCCCC----------C---CHHHHTTCCBCCCTTHHHH
T ss_pred cccccCCcEEECCCcHHHHHHHHHHHHHHhcCCceEEEEEEeeccCCCCccC----Cc---chhhhhcChhhcccchHHH
Confidence 2578999999999999999999999999 8999999999999987621 11 12467889999998752
Q ss_pred --HHHHHHhhhhcC-------------ceeEEEEEeeeeeEeeEEEEEEeCC--CCCHHHHHHHHHHhhc----------
Q 019445 220 --KAVGKVLPALNG-------------KLTGMSFRVPTVDVSVVDLTVRLEK--EATYEEIKNAIKEESE---------- 272 (341)
Q Consensus 220 --~~~~~~lpel~~-------------~l~~~~~rVP~~~g~~~~l~v~l~~--~~~~~ei~~~~~~a~~---------- 272 (341)
.|+.|+++.+.+ +++++|+|||++|||++++++++++ +++.+|++++|+++|+
T Consensus 231 ~~~Ei~kiL~~l~~~~~~~~~~~~~~~~v~ft~~rVPv~rG~~~tv~v~l~~~~~~t~eei~~~l~~~y~~~~~~~l~~~ 310 (381)
T 3hsk_A 231 LEWETKKILGGVNAEGTEFVPIPESEMKVSAQCNRVPVIDGHTECISLRFANRPAPSVEDVKQCLREYECAASKLGCHSA 310 (381)
T ss_dssp HHHHHHHHTCEECTTSSSEECCCTTTCEEEEECCBCSCSSCCEEEEEEEESSSSCCCHHHHHHHHHHCBCHHHHTTCTTC
T ss_pred HHHHHHHHhhhcccccccccccccCCCceEEEEEEeceeccEEEEEEEEeCCCCCCCHHHHHHHHHHhhccccccccccC
Confidence 234555555444 6889999999999999999999999 9999999999999986
Q ss_pred -CcccccccCCCcceeecc-cCCCcceeEEeCCCcceec-CCeEEEEEEeCCC-cchhhhHHHHHHHHh
Q 019445 273 -GKLKGILGYTEEDVVSTD-FVGDSRSSIFDAKAGIALS-KNFVKLVSWYDNE-WGYSSRVIDLIVHMA 337 (341)
Q Consensus 273 -~~~~~il~~~~~~~vs~d-~~~~~~s~~~d~~~~~~~~-~~~~k~~~wydne-~gy~~r~~d~~~~~~ 337 (341)
+||+.++.-.+.|..-.| -..+...+.+- + +..+ ....+++.--||= +|=|-.-+-.+++|.
T Consensus 311 p~~~V~v~~~~~~P~p~~~~~~~~~~~v~Vg-r--ir~d~~~~~~~~~v~DNl~kGAAg~AVq~aell~ 376 (381)
T 3hsk_A 311 PKQTIHVLDQPDRPQPRLDRDRDSGYGVSVG-R--IREDSLLDFKMVVLSHNTIIGAAGAGILIAEILK 376 (381)
T ss_dssp CSBSEEEECSTTCCCHHHHTTTTTTSSEEEE-E--EEECSSSSEEEEEEECHHHHSHHHHHHHHHHHHH
T ss_pred CCCcEEEeCCCCCCceeecccccCCceEEEE-E--EEeCCCCCeEEEEEeCcHHHhHHHHHHHHHHHHH
Confidence 468777755444433322 11112222111 0 0000 1125666666884 454544454555543
No 37
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=4.5e-42 Score=328.65 Aligned_cols=236 Identities=23% Similarity=0.305 Sum_probs=199.4
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccc--cccCcccCceee-ecCCcceEECCEEEEEE
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYD--SVHGQWKHNELK-VKDEKTLLFGEKPVAVF 82 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~d--s~~g~~~~~~v~-~~~~~~l~i~g~~i~v~ 82 (341)
|+||||+|+|++|++++|+|.+||++||++|+|. +.+...++++++ +.||+|. +.+. .+++ .+.+.+
T Consensus 2 ~irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~--~~~~~~~~~~~~g~~~~~~~~-~~v~~~~~~-~~~v~~------ 71 (334)
T 2czc_A 2 KVKVGVNGYGTIGKRVAYAVTKQDDMELIGITKT--KPDFEAYRAKELGIPVYAASE-EFIPRFEKE-GFEVAG------ 71 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEEES--SCSHHHHHHHHTTCCEEESSG-GGHHHHHHH-TCCCSC------
T ss_pred CcEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcC--CHHHHHHHHHhcCcccccccc-ccceeccCC-ceEEcC------
Confidence 5899999999999999999999999999999997 356667777776 7888887 4331 1111 111111
Q ss_pred ecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCC-C-C-CeeeeccCccccCCCCcEEeCCCCcc
Q 019445 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-D-A-PMFVVGVNEKEYKPELDIVSNASCTT 159 (341)
Q Consensus 83 ~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~-d-~-~~~V~Gvn~~~~~~~~~iIsnp~C~t 159 (341)
+++++.| ++|+||+|||++.+.+.++.++++|+ +|++++|.+ | . |++|||+|+++++ +.++|+||||+|
T Consensus 72 ---d~~~l~~---~vDvV~~aTp~~~h~~~a~~~l~aGk-~Vi~sap~~~d~~~~~~v~~vn~~~~~-~~~ii~~~~C~t 143 (334)
T 2czc_A 72 ---TLNDLLE---KVDIIVDATPGGIGAKNKPLYEKAGV-KAIFQGGEKADVAEVSFVAQANYEAAL-GKNYVRVVSCNT 143 (334)
T ss_dssp ---BHHHHHT---TCSEEEECCSTTHHHHHHHHHHHHTC-EEEECTTSCGGGSSEEECHHHHGGGGT-TCSEEEECCHHH
T ss_pred ---cHHHhcc---CCCEEEECCCccccHHHHHHHHHcCC-ceEeecccccccccceEEeccCHHHHh-hCCcEEecCcHH
Confidence 2333322 79999999999999999999999995 477999875 4 4 6999999999998 478999999999
Q ss_pred ceecchhHHHhhhcceeEEEEEEEeeccCcceeeeCCCCCCcccccccccccccc---cCChhHHHHHHhhhhcCceeEE
Q 019445 160 NCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPS---STGAAKAVGKVLPALNGKLTGM 236 (341)
Q Consensus 160 t~Lapllk~L~~~fgi~~~~ittv~a~s~~~~~~d~~s~~~~~~gr~~~~niiP~---~~g~~~~~~~~lpel~~~l~~~ 236 (341)
|||+|++++|++. |+++.++|+|++|+. |+++|++++|++|+ .+|+++++.+++| ++ ++++
T Consensus 144 ~~l~P~~~~l~~~--I~~g~i~ti~a~s~~-----------~~~~r~~~~niiP~i~~~~g~~~~i~~~l~-l~--l~~~ 207 (334)
T 2czc_A 144 TGLVRTLSAIREY--ADYVYAVMIRRAADP-----------NDTKRGPINAIKPTVEVPSHHGPDVQTVIP-IN--IETM 207 (334)
T ss_dssp HHHHHHHHHHGGG--EEEEEEEEEEESSCT-----------TCCSCCCSSCCEECCSSSCTHHHHHTTTSC-CC--EEEE
T ss_pred HHHHHHHHHHHHH--hccccEEEEEEecCc-----------cccccChhhcEEeccCCCCchhhhhheEEE-EE--EEEE
Confidence 9999999999987 999999999999874 35678899999999 8899999999999 76 9999
Q ss_pred EEEeeeeeEeeEEEEEEeCCCCCHHHHHHHHHHhhcCcc
Q 019445 237 SFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKL 275 (341)
Q Consensus 237 ~~rVP~~~g~~~~l~v~l~~~~~~~ei~~~~~~a~~~~~ 275 (341)
++|||+++||+.+++++++++++.+|++++|+++++..+
T Consensus 208 ~~rVPv~~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~~l 246 (334)
T 2czc_A 208 AFVVPTTLMHVHSVMVELKKPLTKDDVIDIFENTTRVLL 246 (334)
T ss_dssp EEEESCSSCEEEEEEEEESSCCCHHHHHHHHHTSTTEEE
T ss_pred EEEcCCCceEEEEEEEEECCCCCHHHHHHHHHhccCCEe
Confidence 999999999999999999999999999999999887433
No 38
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=100.00 E-value=1.8e-41 Score=325.86 Aligned_cols=290 Identities=11% Similarity=0.074 Sum_probs=215.4
Q ss_pred CceeEEEEcc-CHHHHHHHHHHHcCC-----CcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEE
Q 019445 5 KKIKIGINGF-GRIGRLVARVALQRD-----DVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKP 78 (341)
Q Consensus 5 ~~irV~I~G~-G~iG~~llr~l~~~p-----~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~ 78 (341)
+|+||+|+|+ |++|++++|+|.+|| ++|++++++.+..++ .+++.|++|. +.. .+.
T Consensus 8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk------~~~~~~~~l~-~~~------~~~----- 69 (352)
T 2nqt_A 8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGS------TLGEHHPHLT-PLA------HRV----- 69 (352)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTS------BGGGTCTTCG-GGT------TCB-----
T ss_pred cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCC------chhhhccccc-ccc------eee-----
Confidence 4589999998 999999999999999 999999987633333 2466777775 210 111
Q ss_pred EEEEecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCC-CCCe-------------eeecc----
Q 019445 79 VAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-DAPM-------------FVVGV---- 140 (341)
Q Consensus 79 i~v~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~-d~~~-------------~V~Gv---- 140 (341)
+ .+.+++ .|. ++|+||+|+|++.+++.++.+ ++|+++||+|++++ +.+. ++||+
T Consensus 70 --~-~~~~~~--~~~--~~DvVf~alg~~~s~~~~~~~-~~G~~vIDlSa~~R~~~~~~~~~~y~~~h~~~~vyglPEv~ 141 (352)
T 2nqt_A 70 --V-EPTEAA--VLG--GHDAVFLALPHGHSAVLAQQL-SPETLIIDCGADFRLTDAAVWERFYGSSHAGSWPYGLPELP 141 (352)
T ss_dssp --C-EECCHH--HHT--TCSEEEECCTTSCCHHHHHHS-CTTSEEEECSSTTTCSCHHHHHHHHSSCCCCCCCBSCTTST
T ss_pred --e-ccCCHH--Hhc--CCCEEEECCCCcchHHHHHHH-hCCCEEEEECCCccCCcchhhhhhccccCCCCeeEEecccc
Confidence 1 111222 253 899999999999999999999 99999999999987 3333 47888
Q ss_pred -CccccCCCCcEEeCCCCccceecchhHHHhhhccee-EEEEEEEeeccCc-ceeeeCCCCCCcccccccccccccccCC
Q 019445 141 -NEKEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIV-EGLMTTVHSITAT-QKTVDGPSMKDWRGGRAASFNIIPSSTG 217 (341)
Q Consensus 141 -n~~~~~~~~~iIsnp~C~tt~Lapllk~L~~~fgi~-~~~ittv~a~s~~-~~~~d~~s~~~~~~gr~~~~niiP~~~g 217 (341)
|+++|+ ++++||||||||||+++.|++|+++++|+ +..++|+|++||+ +..+|+.+ .+++.++..+.|+.|.
T Consensus 142 ~n~~~i~-~~~iIanPgC~tt~~~lal~PL~~~~~i~~~i~v~t~~g~SGaG~~~~~~~~-~~~~~~~~~ay~~~~~--- 216 (352)
T 2nqt_A 142 GARDQLR-GTRRIAVPGCYPTAALLALFPALAADLIEPAVTVVAVSGTSGAGRAATTDLL-GAEVIGSARAYNIAGV--- 216 (352)
T ss_dssp THHHHHT-TCSEEECCCHHHHHHHHHHHHHHHTTCSCSEEEEEEEECGGGGCSSCCGGGS-HHHHTTCCEECSTTTT---
T ss_pred cCHHHHh-cCCEEEcCCHHHHHHHHHHHHHHHcCCCcceEEEEEEeccccCCcccccccc-HHHHhhhcccccCCCc---
Confidence 888998 68999999999999999999999999998 8999999999998 45555432 3555555455555541
Q ss_pred hhHHHHHHhhhh----------cCceeEEEEEeeeeeEeeEEEEEEeCCCCCHHHHHHHHHHhhc-CcccccccCCCcce
Q 019445 218 AAKAVGKVLPAL----------NGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESE-GKLKGILGYTEEDV 286 (341)
Q Consensus 218 ~~~~~~~~lpel----------~~~l~~~~~rVP~~~g~~~~l~v~l~~~~~~~ei~~~~~~a~~-~~~~~il~~~~~~~ 286 (341)
|+|+||+ +.+++++|+|||++|||++++|++++++ .+||+++|+++|+ +||++++...+-|.
T Consensus 217 -----h~h~pEi~~e~~ki~~~~~~v~ft~~rvP~~rG~~~ti~~~l~~~--~~ei~~~~~~~y~~~~~V~v~~~~~~p~ 289 (352)
T 2nqt_A 217 -----HRHTPEIAQGLRAVTDRDVSVSFTPVLIPASRGILATCTARTRSP--LSQLRAAYEKAYHAEPFIYLMPEGQLPR 289 (352)
T ss_dssp -----STTHHHHHHHHHTTCSSCCEEEEEEEECSCSSCEEEEEEEECCSC--HHHHHHHHHHHHTTCTTEEECCTTCCCC
T ss_pred -----ceecHHHHHHHHHHhCCCCCEEEEEEEEccccEEEEEEEEEECCC--HHHHHHHHHHhhCCCCCEEEeCCCCCcC
Confidence 3566666 3468999999999999999999999987 8999999999998 69999986332232
Q ss_pred eecccCCCcceeEEeCCCccee--cCCeEEEEEEeCCC-cchhhhHHHHHHHHhh
Q 019445 287 VSTDFVGDSRSSIFDAKAGIAL--SKNFVKLVSWYDNE-WGYSSRVIDLIVHMAK 338 (341)
Q Consensus 287 vs~d~~~~~~s~~~d~~~~~~~--~~~~~k~~~wydne-~gy~~r~~d~~~~~~~ 338 (341)
.- +..|.-+-.| + ... .++.+.+++=-||= +|=|-+-+-.++.|-.
T Consensus 290 ~~-~v~g~n~~~i---g--~~~d~~~~~l~~~~~~DNL~KGAAg~AVQ~~nl~~g 338 (352)
T 2nqt_A 290 TG-AVIGSNAAHI---A--VAVDEDAQTFVAIAAIDNLVKGTAGAAVQSMNLALG 338 (352)
T ss_dssp GG-GTTTSSCEEE---E--EEEETTTTEEEEEEEECTTTTTTHHHHHHHHHHHHT
T ss_pred hH-HhcCCcEEEE---E--EEEeCCCCEEEEEEEEcchhHhHHHHHHHHHHHHhC
Confidence 11 3344332222 1 111 23566777778995 5666666666666644
No 39
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=100.00 E-value=5.1e-42 Score=331.46 Aligned_cols=242 Identities=16% Similarity=0.185 Sum_probs=187.3
Q ss_pred eeEEEEcc-CHHHHHHHH-HHHcCC--CcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEE
Q 019445 7 IKIGINGF-GRIGRLVAR-VALQRD--DVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr-~l~~~p--~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 82 (341)
+||||+|+ ||+|++++| +|.+|+ .+++..+.+. | +|+-. . . ++|+.+.+.
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~--------------s-~G~~v-~--------~--~~g~~i~~~ 55 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTS--------------Q-LGQAA-P--------S--FGGTTGTLQ 55 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS--------------S-TTSBC-C--------G--GGTCCCBCE
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeC--------------C-CCCCc-c--------c--cCCCceEEE
Confidence 69999997 999999999 777774 4666666543 2 22210 0 0 112223333
Q ss_pred ecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCC-----CCCeeeeccCccccCCC---C-cEEe
Q 019445 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-----DAPMFVVGVNEKEYKPE---L-DIVS 153 (341)
Q Consensus 83 ~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~-----d~~~~V~Gvn~~~~~~~---~-~iIs 153 (341)
...++++ |+ ++|+||+|||++.++++++.++++|+|+++||++++ +.|++|+++|+++++.. . ++||
T Consensus 56 ~~~~~~~--~~--~~DvVf~a~g~~~s~~~a~~~~~~G~k~vVID~ss~~R~~~~~~~~vpevN~~~i~~~~~~g~~~Ia 131 (367)
T 1t4b_A 56 DAFDLEA--LK--ALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDGLNNGIRTFV 131 (367)
T ss_dssp ETTCHHH--HH--TCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEE
T ss_pred ecCChHH--hc--CCCEEEECCCchhHHHHHHHHHHCCCCEEEEcCChhhccCCCCcEEeCCcCHHHHhhhhhcCCCEEE
Confidence 2222332 64 899999999999999999999999996666666654 47899999999988731 1 7999
Q ss_pred CCCCccceecchhHHHhhhcceeEEEEEEEeeccCccee-------------------eeCCCCC--Cc-----------
Q 019445 154 NASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKT-------------------VDGPSMK--DW----------- 201 (341)
Q Consensus 154 np~C~tt~Lapllk~L~~~fgi~~~~ittv~a~s~~~~~-------------------~d~~s~~--~~----------- 201 (341)
||||||||++|++++|+++|+|+++.++|+|++||+++- .|+++.. ++
T Consensus 132 np~Cttt~~~~al~pL~~~~~I~~~~vtt~~a~SGaG~~~~~el~~~~~~l~~~~~~~~~~~~~~ild~~r~~~~~~~~~ 211 (367)
T 1t4b_A 132 GGNCTVSLMLMSLGGLFANDLVDWVSVATYQAASGGGARHMRELLTQMGHLYGHVADELATPSSAILDIERKVTTLTRSG 211 (367)
T ss_dssp ECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHHTHHHHTCTTCCHHHHHHHHHHHHHHT
T ss_pred eCCHHHHHHHHHHHHHHHcCCCcEEEEEEEeccccccccchHHHHHHHhhhhccccccccccccchhhhhhccccccccc
Confidence 999999999999999999999999999999999998531 2334310 23
Q ss_pred -----ccccccccccccccCC------------hhHHHHHHhhh-hcCceeEEEEEeeeeeEeeEEEEEEeCCCCCHHHH
Q 019445 202 -----RGGRAASFNIIPSSTG------------AAKAVGKVLPA-LNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEI 263 (341)
Q Consensus 202 -----~~gr~~~~niiP~~~g------------~~~~~~~~lpe-l~~~l~~~~~rVP~~~g~~~~l~v~l~~~~~~~ei 263 (341)
.+++.+++|++|+.++ ..+++.+++|+ ...+++++|+|||++|||++++|++++++++.+||
T Consensus 212 ~~~~~~f~~~~a~NiiP~~~~~~~~~~t~EE~k~~~e~~kil~~~~~~~v~~t~vrVPv~~g~~~~v~v~l~~~~t~eei 291 (367)
T 1t4b_A 212 ELPVDNFGVPLAGSLIPWIDKQLDNGQSREEWKGQAETNKILNTSSVIPVDGLCVRVGALRCHSQAFTIKLKKDVSIPTV 291 (367)
T ss_dssp CSCCTTTSSCCTTCEESCCSCBCTTSCBHHHHHHHHHHHHHHTCSSCCCEEEECCEESCSSEEEEEEEEEESSCCCHHHH
T ss_pred cCcccccchhhhCceEEEecCccccCccHHHHHHHHHHHHHhCcCCCceEEEEEEEcCccceEEEEEEEEECCCCCHHHH
Confidence 2368899999999987 56677888854 34479999999999999999999999999999999
Q ss_pred HHHHHHhhcCccccccc
Q 019445 264 KNAIKEESEGKLKGILG 280 (341)
Q Consensus 264 ~~~~~~a~~~~~~~il~ 280 (341)
+++|+++ .||+.++.
T Consensus 292 ~~~l~~~--~~~V~v~~ 306 (367)
T 1t4b_A 292 EELLAAH--NPWAKVVP 306 (367)
T ss_dssp HHHHHHH--CTTCCBCC
T ss_pred HHHHHhc--CCCEEEec
Confidence 9999988 47888875
No 40
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=100.00 E-value=1.4e-40 Score=320.36 Aligned_cols=297 Identities=14% Similarity=0.173 Sum_probs=215.3
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcC--CCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEE
Q 019445 6 KIKIGINGF-GRIGRLVARVALQR--DDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~--p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 82 (341)
++||||+|+ ||+|++|+|+|.+| |.+|++.+.+.+..++ .+.+.++.+.+
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~--------------------------~~~~~~~~~~~- 54 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGK--------------------------SLKFKDQDITI- 54 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTC--------------------------EEEETTEEEEE-
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCC--------------------------cceecCCCceE-
Confidence 589999999 99999999999998 8899999987633322 12233333332
Q ss_pred ecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCC---CCCeeeeccCccccCCCCcEEeCCCCcc
Q 019445 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK---DAPMFVVGVNEKEYKPELDIVSNASCTT 159 (341)
Q Consensus 83 ~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~---d~~~~V~Gvn~~~~~~~~~iIsnp~C~t 159 (341)
++.+++. | .++|+||+|||++.+++.+++++++|+++||+|++++ +.|.++||+|++.|+...++||||||||
T Consensus 55 ~~~~~~~--~--~~~Dvvf~a~~~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpevN~~~i~~~~~iIanpgC~t 130 (366)
T 3pwk_A 55 EETTETA--F--EGVDIALFSAGSSTSAKYAPYAVKAGVVVVDNTSYFRQNPDVPLVVPEVNAHALDAHNGIIACPNCST 130 (366)
T ss_dssp EECCTTT--T--TTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCHHHHGGGGTTCCSEEECCCHHH
T ss_pred eeCCHHH--h--cCCCEEEECCChHhHHHHHHHHHHCCCEEEEcCCccccCCCceEEEccCCHHHHcCCCCeEECCCcHH
Confidence 3334333 3 4899999999999999999999999999999999986 4789999999999984489999999999
Q ss_pred ceecchhHHHhhhcceeEEEEEEEeeccCcce-e-----------eeC------CCCCCc-----ccccccccccccccC
Q 019445 160 NCLAPLAKVIHDKFGIVEGLMTTVHSITATQK-T-----------VDG------PSMKDW-----RGGRAASFNIIPSST 216 (341)
Q Consensus 160 t~Lapllk~L~~~fgi~~~~ittv~a~s~~~~-~-----------~d~------~s~~~~-----~~gr~~~~niiP~~~ 216 (341)
||++|++++|+++|+|+++.++|+|++||.++ . +++ ...+.. ++-+.+++|++|+..
T Consensus 131 t~~~l~l~pL~~~~~i~~i~v~t~~~vSGAG~~~~~~l~~~~~~~~~~~~~~~~~~~~~y~~~~~HrH~~ia~NviP~I~ 210 (366)
T 3pwk_A 131 IQMMVALEPVRQKWGLDRIIVSTYQAVSGAGMGAILETQRELREVLNDGVKPCDLHAEILPSGGDKKHYPIAFNALPQID 210 (366)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEEEEBCGGGGCHHHHHHHHHHHHHHHHHCCCGGGCCCSSSSCTTSSCCCCCTTCCBCCSS
T ss_pred HHHHHHHHHHHHhCCCcEEEEEEEEeccccCcchhhHHHHHHHHHhcccccccccCcccCCcccccccchhhccccceec
Confidence 99999999999999999999999999999754 1 111 000111 111678999999973
Q ss_pred -----ChhHHHHHHhhhhc-------CceeEEEEEeeeeeEeeEEEEEEeCCCCCHHHHHHHHHHhhcCcccccccCCCc
Q 019445 217 -----GAAKAVGKVLPALN-------GKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGYTEE 284 (341)
Q Consensus 217 -----g~~~~~~~~lpel~-------~~l~~~~~rVP~~~g~~~~l~v~l~~~~~~~ei~~~~~~a~~~~~~~il~~~~~ 284 (341)
|.++|+.|+..|.. -+++++|+|||++|||+.++|++++++++.+|++++|+++ ||+.++..+++
T Consensus 211 ~~~~~g~t~EE~k~~~E~~kil~~~~~~v~ftp~rVPv~rG~~~tv~v~l~~~~s~eei~~~l~~~---~~V~v~~~~~~ 287 (366)
T 3pwk_A 211 VFTDNDYTYEEMKMTKETKKIMEDDSIAVSATCVRIPVLSAHSESVYIETKEVAPIEEVKAAIAAF---PGAVLEDDVAH 287 (366)
T ss_dssp CBCTTSSBHHHHHHHHHHHHHTTCTTSEEEEECCBCSCSSCEEEEEEEECSSCCCHHHHHHHHHHS---TTEEECCBGGG
T ss_pred ccccCCCcHHHHHHHHHHHHHhcCCCCCeEEEEEEechhccEEEEEEEEECCCCCHHHHHHHHHhC---CCcEEecCccc
Confidence 55677666555432 3589999999999999999999999999999999999986 67777653311
Q ss_pred ---ceeecccCCCcceeEEeCCCcceecCCeEEEEEEeCCC-cchhhhHHHHHHHHhh
Q 019445 285 ---DVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNE-WGYSSRVIDLIVHMAK 338 (341)
Q Consensus 285 ---~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne-~gy~~r~~d~~~~~~~ 338 (341)
|..- +..|.-+-.|-=.... ...++.+.+++=-||= +|=|-+-+-.|+.|-+
T Consensus 288 ~~~P~~~-~v~gtn~~~Vgr~r~d-~~~~~~l~~~~~~DNL~KGAAg~AVQn~nlm~~ 343 (366)
T 3pwk_A 288 QIYPQAI-NAVGSRDTFVGRIRKD-LDAEKGIHMWVVSDNLLKGAAWNSVQIAETLHE 343 (366)
T ss_dssp TBCCCHH-HHTTCSSEEEEEEEEC-SSCTTEEEEEEEECTTTTTTHHHHHHHHHHHHH
T ss_pred CCCCchh-HcCCCCEEEEEEEEec-CCCCCEEEEEEEEccHHHhHHHHHHHHHHHHHH
Confidence 1111 2233322211000000 0123556777778995 5666666656665543
No 41
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=100.00 E-value=3.2e-39 Score=308.74 Aligned_cols=293 Identities=18% Similarity=0.239 Sum_probs=211.1
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcC--CCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEe
Q 019445 7 IKIGINGF-GRIGRLVARVALQR--DDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG 83 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~--p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 83 (341)
+||||+|+ ||+|++++|+|.+| |.+|++.+.+.+..++ .+.+.|+.+.+ +
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~--------------------------~~~~~~~~~~~-~ 54 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGR--------------------------KLAFRGQEIEV-E 54 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSC--------------------------EEEETTEEEEE-E
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCC--------------------------ceeecCCceEE-E
Confidence 69999999 99999999999998 8899999987633332 22233433333 3
Q ss_pred cCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCC---CCCeeeeccCc-cccCCC-CcEEeCCCCc
Q 019445 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK---DAPMFVVGVNE-KEYKPE-LDIVSNASCT 158 (341)
Q Consensus 84 ~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~---d~~~~V~Gvn~-~~~~~~-~~iIsnp~C~ 158 (341)
+.+++. | .++|+||+|+|++.+++.+++++++|+++||+|++++ |.|.++|++|+ +.|+.. .++|||||||
T Consensus 55 ~~~~~~--~--~~~Dvvf~a~~~~~s~~~a~~~~~~G~~vID~Sa~~R~~~~~p~~vpevN~~~~i~~~~~~iIanpgC~ 130 (344)
T 3tz6_A 55 DAETAD--P--SGLDIALFSAGSAMSKVQAPRFAAAGVTVIDNSSAWRKDPDVPLVVSEVNFERDAHRRPKGIIANPNCT 130 (344)
T ss_dssp ETTTSC--C--TTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTSHHHHTTCCTTSEEECCCHH
T ss_pred eCCHHH--h--ccCCEEEECCChHHHHHHHHHHHhCCCEEEECCCccccCCCccEEEccCCCHHHhhhcCCCEEECCCcH
Confidence 333333 3 4899999999999999999999999999999999985 47999999999 999742 5899999999
Q ss_pred cceecchhHHHhhhcceeEEEEEEEeeccCccee--------------------eeCCCC---CCccccccccccccccc
Q 019445 159 TNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKT--------------------VDGPSM---KDWRGGRAASFNIIPSS 215 (341)
Q Consensus 159 tt~Lapllk~L~~~fgi~~~~ittv~a~s~~~~~--------------------~d~~s~---~~~~~gr~~~~niiP~~ 215 (341)
|||++|++++|+++|+|+++.++|+|++||.++- +++... ....++...+.|++|+.
T Consensus 131 tt~~~l~l~pL~~~~~i~~i~v~t~~~~SGAG~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aynv~p~i 210 (344)
T 3tz6_A 131 TMAAMPVLKVLHDEARLVRLVVSSYQAVSGSGLAGVAELAEQARAVIGGAEQLVYDGGALEFPPPNTYVAPIAFNVVPLA 210 (344)
T ss_dssp HHHHHHHHHHHHHHHCEEEEEEEEEBCGGGGCHHHHHHHHHHHHHHGGGGGGGGTCTTSSCCCCCSSSSSCCTTCCBCCC
T ss_pred HHHHHHHHHHHHHhCCCceEEEEeccCCCccChhhhHHHHHHHHhhhccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999997531 222210 11244566788999974
Q ss_pred C-----Ch--hHHHHHHhhhhc-------CceeEEEEEeeeeeEeeEEEEEEeCCCCCHHHHHHHHHHhhcCcccccccC
Q 019445 216 T-----GA--AKAVGKVLPALN-------GKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESEGKLKGILGY 281 (341)
Q Consensus 216 ~-----g~--~~~~~~~lpel~-------~~l~~~~~rVP~~~g~~~~l~v~l~~~~~~~ei~~~~~~a~~~~~~~il~~ 281 (341)
. |. .+|+.|+.-|++ -+++++|+|||++|||+.++|++++++++.+|++++|++ .||++++.|
T Consensus 211 ~~~~~~ghrHt~EE~k~~~e~~kilg~~~~~v~ft~vrvPv~rGh~~tv~v~l~~~~s~eei~~~l~~---~p~V~v~~~ 287 (344)
T 3tz6_A 211 GSLVDDGSGETDEDQKLRFESRKILGIPDLLVSGTCVRVPVFTGHSLSINAEFAQPLSPERARELLDG---ATGVQLVDV 287 (344)
T ss_dssp SCBCSSSSCCBHHHHHHHHHHHHHHTCTTCEEEEECCBCSCSSCEEEEEEEEESSCCCHHHHHHHHHH---CTTEEECSS
T ss_pred cccccCCCcCCHHHHHHHHHHHHhcCCCCCceEEEEEEeceeceEEEEEEEEECCCCCHHHHHHHHhc---CCCeEEECC
Confidence 2 32 344322222221 258999999999999999999999999999999999984 589888874
Q ss_pred CCcceeecccCCCcceeEEeCCCccee-cCCeEEEEEEeCCC-cchhhhHHHHHHHHh
Q 019445 282 TEEDVVSTDFVGDSRSSIFDAKAGIAL-SKNFVKLVSWYDNE-WGYSSRVIDLIVHMA 337 (341)
Q Consensus 282 ~~~~~vs~d~~~~~~s~~~d~~~~~~~-~~~~~k~~~wydne-~gy~~r~~d~~~~~~ 337 (341)
+. |. +..|.-+-.|-=....... +++.+.+++=-||= +|=|-.-+-.|+.|.
T Consensus 288 P~-p~---~v~gtn~~~Vgrir~d~~~~~~~~l~~~~~~DNL~KGAAg~AVQ~anll~ 341 (344)
T 3tz6_A 288 PT-PL---AAAGVDESLVGRIRRDPGVPDGRGLALFVSGDNLRKGAALNTIQIAELLT 341 (344)
T ss_dssp CC-HH---HHTTCSSEEEEEEEECTTSGGGCEEEEEEEECTTTTTTHHHHHHHHHHHT
T ss_pred CC-hH---HhCCCceEEEEEEEecCCCCCCCEEEEEEEEcchhHhHHHHHHHHHHHHH
Confidence 43 21 2233222211100000000 12357777778994 676666666666553
No 42
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.1e-38 Score=305.10 Aligned_cols=287 Identities=15% Similarity=0.147 Sum_probs=209.8
Q ss_pred CceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEe
Q 019445 5 KKIKIGINGF-GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG 83 (341)
Q Consensus 5 ~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 83 (341)
.|+||||+|+ ||+|++++|+|.+||++||+.+++.+..++. +++.|+.|. . .+. +.
T Consensus 12 ~~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~------~~~~~p~~~-~--------~l~--------~~ 68 (351)
T 1vkn_A 12 HMIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKK------LEEIFPSTL-E--------NSI--------LS 68 (351)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSB------HHHHCGGGC-C--------CCB--------CB
T ss_pred ceeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCC------hHHhChhhc-c--------Cce--------EE
Confidence 3699999999 9999999999999999999999987555543 445666553 1 111 11
Q ss_pred cCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCC-CC--------------Cee---eecc---Cc
Q 019445 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-DA--------------PMF---VVGV---NE 142 (341)
Q Consensus 84 ~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~-d~--------------~~~---V~Gv---n~ 142 (341)
+.+++++ | .++|+||+|+|++.++++++++ +|+++||+|++++ +. |.+ +||+ |+
T Consensus 69 ~~~~~~~-~--~~~Dvvf~alp~~~s~~~~~~~--~g~~VIDlSsdfRl~~~~~y~~~y~~~h~~p~~~~~~yglPE~n~ 143 (351)
T 1vkn_A 69 EFDPEKV-S--KNCDVLFTALPAGASYDLVREL--KGVKIIDLGADFRFDDPGVYREWYGKELSGYENIKRVYGLPELHR 143 (351)
T ss_dssp CCCHHHH-H--HHCSEEEECCSTTHHHHHHTTC--CSCEEEESSSTTTCSSHHHHHHHHCCCCTTGGGCCEEECCHHHHH
T ss_pred eCCHHHh-h--cCCCEEEECCCcHHHHHHHHHh--CCCEEEECChhhhCCchhhhhhhcCCCCCchhhcCCceECCccCH
Confidence 1122222 2 3799999999999999999988 8999999999987 22 333 8888 68
Q ss_pred cccCCCCcEEeCCCCccceecchhHHHhhhccee--EEEEEEEeeccCccee-eeCCCCCCcccccccccccccccCChh
Q 019445 143 KEYKPELDIVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITATQKT-VDGPSMKDWRGGRAASFNIIPSSTGAA 219 (341)
Q Consensus 143 ~~~~~~~~iIsnp~C~tt~Lapllk~L~~~fgi~--~~~ittv~a~s~~~~~-~d~~s~~~~~~gr~~~~niiP~~~g~~ 219 (341)
++++ .+++|||||||||++++.|++|+++++|+ +..++|++++||.++- .+. .. ...+..|++||..+.
T Consensus 144 e~i~-~a~iIANPgC~~t~~~laL~PL~~~~~i~~~~iiv~t~sgvSGAG~~~~~~-----~~-~~e~~~n~~~y~~~~- 215 (351)
T 1vkn_A 144 EEIK-NAQVVGNPGCYPTSVILALAPALKHNLVDPETILVDAKSGVSGAGRKEKVD-----YL-FSEVNESLRPYNVAK- 215 (351)
T ss_dssp HHHT-TCSEEECCCHHHHHHHHHHHHHHHTTCSCCSEEEEEEEEEGGGGCSCCSGG-----GB-HHHHTTCCEECSCSC-
T ss_pred HHhc-cCCEEeCCChHHHHHHHHHHHHHHcCCCCCCEEEEEEEeeccccCcccccc-----cc-hhHHhcccccCCccc-
Confidence 8888 58999999999999999999999999998 9999999999998661 111 11 124457888998764
Q ss_pred HHHHHHhhhhc----------CceeEEEEEeeeeeEeeEEEEEEeCCCCCHHHHHHHHHHhhc-CcccccccCCCcceee
Q 019445 220 KAVGKVLPALN----------GKLTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEESE-GKLKGILGYTEEDVVS 288 (341)
Q Consensus 220 ~~~~~~lpel~----------~~l~~~~~rVP~~~g~~~~l~v~l~~~~~~~ei~~~~~~a~~-~~~~~il~~~~~~~vs 288 (341)
|||+||+. -+++++|+|||++|||+.++|++++ ++.+|++++|+++|+ +||++++...+-|..-
T Consensus 216 ---h~h~pEi~~el~~i~~~~~~v~ftp~rvPv~rG~~~tv~v~l~--~~~eei~~~l~~~Y~~~pfV~v~~~~~~P~~~ 290 (351)
T 1vkn_A 216 ---HRHVPEMEQELGKISGKKVNVVFTPHLVPMTRGILSTIYVKTD--KSLEEIHEAYLEFYKNEPFVHVLPMGIYPSTK 290 (351)
T ss_dssp ---CTHHHHHHHHHHHHHTSCCEEEEEEEEESSSSCEEEEEEEECS--SCHHHHHHHHHHHHTTCTTEEECCTTCCCCGG
T ss_pred ---cccHHHHHHHHHHhhCCCCCEEEEEEEeccccEEEEEEEEEEc--CCHHHHHHHHHHhhCCCCCEEEeCCCCCcChH
Confidence 33444432 2588999999999999999999998 899999999999998 6999998633233222
Q ss_pred cccCCCcceeEEeCCCccee--cCCeEEEEEEeCCC-cchhhhHHHHHHHHhh
Q 019445 289 TDFVGDSRSSIFDAKAGIAL--SKNFVKLVSWYDNE-WGYSSRVIDLIVHMAK 338 (341)
Q Consensus 289 ~d~~~~~~s~~~d~~~~~~~--~~~~~k~~~wydne-~gy~~r~~d~~~~~~~ 338 (341)
+..|.-+-.| + ... ..+.+.+++=-||= .|=|-+-+-.|+.|-.
T Consensus 291 -~v~gtn~~~I---g--~~~d~~~~~l~~~s~~DNL~KGAAgqAVQn~nlm~G 337 (351)
T 1vkn_A 291 -WCYGSNHVFI---G--MQMEERTNTLILMSAIDNLVKGASGQAVQNMNIMFG 337 (351)
T ss_dssp -GGTTSSCEEE---E--EEEETTTTEEEEEEEECTTTTTTHHHHHHHHHHHTT
T ss_pred -HhcCCceEEE---E--EEEcCCCCEEEEEEEcccHHHhHHHHHHHHHHHHhC
Confidence 2233322222 1 111 12445555558995 4666666666666644
No 43
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=100.00 E-value=1.5e-39 Score=313.54 Aligned_cols=295 Identities=16% Similarity=0.153 Sum_probs=203.7
Q ss_pred eeEEEEcc-CHHHHHHHH-HHHcCC--CcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEE
Q 019445 7 IKIGINGF-GRIGRLVAR-VALQRD--DVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr-~l~~~p--~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 82 (341)
+||||+|+ ||+|++|+| +|.+|| .++++.+.+.+ .++.+. .|. |..+.+.
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~-aG~~~~----------~~~---------------~~~~~~~ 54 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ-IGVPAP----------NFG---------------KDAGMLH 54 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCC----------CSS---------------SCCCBCE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccc-cCcCHH----------HhC---------------CCceEEE
Confidence 48999999 999999999 999998 68999988763 332110 121 1111111
Q ss_pred ecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecC--CCC---CCCeeeeccCccccCCC----CcEEe
Q 019445 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISA--PSK---DAPMFVVGVNEKEYKPE----LDIVS 153 (341)
Q Consensus 83 ~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa--~~~---d~~~~V~Gvn~~~~~~~----~~iIs 153 (341)
...+++. | .++|+||+|+|++.+++++++|+++|+|+++||+ +++ |.|.++||+|+++++.. .++||
T Consensus 55 ~~~~~~~--~--~~~Dvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~Ia 130 (370)
T 3pzr_A 55 DAFDIES--L--KQLDAVITCQGGSYTEKVYPALRQAGWKGYWIDAASTLRMDKEAIITLDPVNLKQILHGIHHGTKTFV 130 (370)
T ss_dssp ETTCHHH--H--TTCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEE
T ss_pred ecCChhH--h--ccCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCchhccCCCCcEEcccCCHHHHhhhhhcCCcEEE
Confidence 1111221 3 4899999999999999999999999985444454 444 46899999999888631 25699
Q ss_pred CCCCccceecchhHHHhhhcceeEEEEEEEeeccCcceee---------------------------e----------CC
Q 019445 154 NASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTV---------------------------D----------GP 196 (341)
Q Consensus 154 np~C~tt~Lapllk~L~~~fgi~~~~ittv~a~s~~~~~~---------------------------d----------~~ 196 (341)
||||||||++|+|++|+++|+|+++.++|+|++||.++-. | +.
T Consensus 131 np~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGAG~~~~~el~~q~~~~~~~~~~~l~~p~~~ild~~~~~~~~~~~~ 210 (370)
T 3pzr_A 131 GGNCTVSLMLMALGGLYERGLVEWMSAMTYQAASGAGAQNMRELISQMGVINDAVSSELANPASSILDIDKKVAETMRSG 210 (370)
T ss_dssp ECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHST
T ss_pred cCChHHHHHHHHHHHHHHhCCCcEEEEEeEEeccccChhhHHHHHHHHHHhhcccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999999975310 0 11
Q ss_pred CCCCcccccccccccccccC-----ChhHHHHHHhhhh---------cCceeEEEEEeeeeeEeeEEEEEEeCCCCCHHH
Q 019445 197 SMKDWRGGRAASFNIIPSST-----GAAKAVGKVLPAL---------NGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEE 262 (341)
Q Consensus 197 s~~~~~~gr~~~~niiP~~~-----g~~~~~~~~lpel---------~~~l~~~~~rVP~~~g~~~~l~v~l~~~~~~~e 262 (341)
+.....+++.+++|++|+.. |.++++.++.-|+ .-+++++|+|||++|||+.++|++++++++.+|
T Consensus 211 ~~~~~~f~~~ia~N~~P~i~~~~~~g~t~EE~ki~~E~~kilg~~~~~i~V~~t~vrVPv~rGh~~tv~v~~~~~~~~~e 290 (370)
T 3pzr_A 211 SFPTDNFGVPLAGSLIPWIDVKRDNGQSKEEWKAGVEANKILGLQDSPVPIDGTCVRIGAMRCHSQALTIKLKQNIPLDE 290 (370)
T ss_dssp TSCCTTTSSCCTTSEESCCSCBCTTSCBHHHHHHHHHHHHHTTCTTSCCCEECCCCEESCSSEEEEEEEEEESSCCCHHH
T ss_pred ccccccccccccCceeeeccccccCCCCHHHHHHHHHHHHHhCccCCCceEEEEeEEecccceEEEEEEEEeCCCCCHHH
Confidence 11123456678899999974 3344443333222 125889999999999999999999999999999
Q ss_pred HHHHHHHhhcCcccccccCCC-----cceeecccCCCcceeEEeCCCccee---cCCeEEEEEEeCC-CcchhhhHHHHH
Q 019445 263 IKNAIKEESEGKLKGILGYTE-----EDVVSTDFVGDSRSSIFDAKAGIAL---SKNFVKLVSWYDN-EWGYSSRVIDLI 333 (341)
Q Consensus 263 i~~~~~~a~~~~~~~il~~~~-----~~~vs~d~~~~~~s~~~d~~~~~~~---~~~~~k~~~wydn-e~gy~~r~~d~~ 333 (341)
++++|+++ .||++++.-.. -|.. .+..|.- .+-+- - +.. .++.+.+++==|| -||=|-+.+-.|
T Consensus 291 i~~~l~~~--~p~V~v~~~~~~~~~~~P~p-~~v~G~n-~v~VG--r-ir~d~~~~~~l~~~~v~DNL~KGAAgqAvQn~ 363 (370)
T 3pzr_A 291 IEEMIATH--NDWVKVIPNERDITARELTP-AKVTGTL-SVPVG--R-LRKMAMGDDFLNAFTVGDQLLWGAAEPLRRTL 363 (370)
T ss_dssp HHHHHHTS--CSSEEECCSCHHHHHHHSSH-HHHTTSC-CEEEE--E-EEEETTEEEEEEEEEEEETTTTTTHHHHHHHH
T ss_pred HHHHHHhC--CCCEEEecCCcccccCCCCH-HHhcCCc-cEEEE--E-EEECCCCCCEEEEEEEehhhhHhHHHHHHHHH
Confidence 99999987 58888875321 1110 1223322 22111 0 011 1233445555788 468777777777
Q ss_pred HHHhh
Q 019445 334 VHMAK 338 (341)
Q Consensus 334 ~~~~~ 338 (341)
+.|..
T Consensus 364 Nl~~~ 368 (370)
T 3pzr_A 364 RIILA 368 (370)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 77654
No 44
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=100.00 E-value=9.2e-39 Score=308.64 Aligned_cols=295 Identities=14% Similarity=0.182 Sum_probs=204.9
Q ss_pred ceeEEEEcc-CHHHHHHHH-HHHcCC--CcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEE
Q 019445 6 KIKIGINGF-GRIGRLVAR-VALQRD--DVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAV 81 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr-~l~~~p--~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v 81 (341)
++||||+|+ ||+|++|+| +|.+|| .++++.+.+. ..++.+. .|. |+.+.+
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-~aG~~~~----------~~~---------------~~~~~v 57 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS-NAGGKAP----------SFA---------------KNETTL 57 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-CTTSBCC----------TTC---------------CSCCBC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech-hcCCCHH----------HcC---------------CCceEE
Confidence 579999999 999999999 999998 6899888775 3332110 121 111111
Q ss_pred EecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCc--EEEecCCCC---CCCeeeeccCccccCCC--C--cEE
Q 019445 82 FGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAK--KVVISAPSK---DAPMFVVGVNEKEYKPE--L--DIV 152 (341)
Q Consensus 82 ~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k--~V~lSa~~~---d~~~~V~Gvn~~~~~~~--~--~iI 152 (341)
....+++ .| .++|+||+|+|++.+++++++++++|+| +|++|++++ |.|.++||+|+++++.. . ++|
T Consensus 58 ~~~~~~~--~~--~~vDvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~I 133 (377)
T 3uw3_A 58 KDATSID--DL--KKCDVIITCQGGDYTNDVFPKLRAAGWNGYWIDAASSLRMKDDAVIILDPVNLNVIKDALVNGTKNF 133 (377)
T ss_dssp EETTCHH--HH--HTCSEEEECSCHHHHHHHHHHHHHTTCCSEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEE
T ss_pred EeCCChh--Hh--cCCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCcccccCCCCceECCcCCHHHHhhhhhcCCcEE
Confidence 1110121 23 3899999999999999999999999984 445555544 36899999999888631 2 469
Q ss_pred eCCCCccceecchhHHHhhhcceeEEEEEEEeeccCccee------------ee-------------------------C
Q 019445 153 SNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKT------------VD-------------------------G 195 (341)
Q Consensus 153 snp~C~tt~Lapllk~L~~~fgi~~~~ittv~a~s~~~~~------------~d-------------------------~ 195 (341)
|||||||||++|+|++|+++|+|+++.++|+|++||.++- .+ +
T Consensus 134 anp~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGAG~~~~~el~~q~~~l~~~~~~~~~~p~~~ild~~~~~~~~~~~ 213 (377)
T 3uw3_A 134 IGGNCTVSLMLMALGGLFRENLVDWMTAMTYQAASGAGAQNMRELLAQMGTLNGAVAAQLADPASAILDIDRRVLAAMNG 213 (377)
T ss_dssp EECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHTTHHHHTCTTSCHHHHHHHHHHHHHS
T ss_pred EcCCHHHHHHHHHHHHHHHhCCCCEEEEeeeecccccchhhHHHHHHHHHHhhccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999999997531 11 1
Q ss_pred CCCCCcccccccccccccccC-----ChhHHH-------HHHhhhh------cCceeEEEEEeeeeeEeeEEEEEEeCCC
Q 019445 196 PSMKDWRGGRAASFNIIPSST-----GAAKAV-------GKVLPAL------NGKLTGMSFRVPTVDVSVVDLTVRLEKE 257 (341)
Q Consensus 196 ~s~~~~~~gr~~~~niiP~~~-----g~~~~~-------~~~lpel------~~~l~~~~~rVP~~~g~~~~l~v~l~~~ 257 (341)
.+.....+++.+++|++|+.. |.++++ .|++..+ .-+++++|+|||++|||+.++|++++++
T Consensus 214 ~~~~~~~f~~~ia~N~~P~i~~~~~~g~t~EE~ki~~E~~kilg~~~~~~~~~i~Vs~t~vrVPv~rGh~~tv~v~~~~~ 293 (377)
T 3uw3_A 214 DAMPTSQFGVPLAGSLIPWIDKDLGNGMSREEWKGGAETNKILGKPAMGEPGSVPVDGLCVRIGAMRCHSQALTIKLKKD 293 (377)
T ss_dssp TTSCCTTTSSCCTBSCBSCCSCBCSSSCBHHHHHHHHHHHHHHTCCCTTSTTCCCEEEECCBCSBSSEEEEEEEEEESSC
T ss_pred cccccccccccccCceEEeecccccCCCCHHHHHHHHHHHHHhcccccccCCCceEEEEeEEecccceEEEEEEEEeCCC
Confidence 111123456778999999974 334554 4444432 2258999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcCcccccccCCC-------cceeecccCCCcceeEEeCCCcc-eecCCeEEEEEEeCC-Ccchhhh
Q 019445 258 ATYEEIKNAIKEESEGKLKGILGYTE-------EDVVSTDFVGDSRSSIFDAKAGI-ALSKNFVKLVSWYDN-EWGYSSR 328 (341)
Q Consensus 258 ~~~~ei~~~~~~a~~~~~~~il~~~~-------~~~vs~d~~~~~~s~~~d~~~~~-~~~~~~~k~~~wydn-e~gy~~r 328 (341)
++.+|++++|+++ .||++++.-.. .|. +..|.- .+.+- .... ...++.+.+++==|| -||=|-+
T Consensus 294 ~~~eei~~~l~~~--~p~V~v~~~~~~~~~~~P~p~---~v~G~n-~v~VG-rir~d~~~~~~l~~~~v~DNL~KGAAgq 366 (377)
T 3uw3_A 294 VPLDEINGILASA--NDWVKVVPNEREASMRDLSPA---KVTGTL-SVPVG-RLRKLAMGGEYLSAFTVGDQLLWGAAEP 366 (377)
T ss_dssp CCHHHHHHHHHTS--CSSEEECCSSHHHHHHHSSHH---HHTTSS-CEEEE-EEEECTTCTTEEEEEEEEETTCCCCCHH
T ss_pred CCHHHHHHHHHhC--CCCEEEecCCcccccCCCCHH---HhcCCC-cEEEE-EEEECCCCCCEEEEEEEehhhhHhHHHH
Confidence 9999999999987 57888875321 121 223322 22111 0000 012355666666788 4677777
Q ss_pred HHHHHHHHh
Q 019445 329 VIDLIVHMA 337 (341)
Q Consensus 329 ~~d~~~~~~ 337 (341)
.+-.|+.|-
T Consensus 367 Avqn~nl~~ 375 (377)
T 3uw3_A 367 LRRMLRILL 375 (377)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 776666654
No 45
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=99.24 E-value=8.8e-12 Score=117.60 Aligned_cols=213 Identities=17% Similarity=0.201 Sum_probs=124.4
Q ss_pred CceeEEEEccCHHHHHHHHHHHc-CCCcEEEEeeCCCCC--hhhhhhhcccccccCcccCceeeecCCcceEECCEEEEE
Q 019445 5 KKIKIGINGFGRIGRLVARVALQ-RDDVELVAVNDPFIS--TDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAV 81 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~-~p~~elv~i~~~~~~--~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v 81 (341)
+++||||+|+|++|+.+++.+.+ +|.++++++.|...+ ...++. .+|... .
T Consensus 3 ~~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~------~~g~~~-------------~------- 56 (312)
T 1nvm_B 3 QKLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQ------RMGVTT-------------T------- 56 (312)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHH------HTTCCE-------------E-------
T ss_pred CCCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHH------HcCCCc-------------c-------
Confidence 36899999999999999999977 899999999987322 222221 111000 0
Q ss_pred EecCCCCCC----CccCCCccEEEecCCCccCHHHHHHHHhC--CCcEEEecCCCCCCCeeeeccCccccCC--CCcEEe
Q 019445 82 FGFRNPEEI----PWAKTGAEYVVESTGVFTDKDKAAAHLKG--GAKKVVISAPSKDAPMFVVGVNEKEYKP--ELDIVS 153 (341)
Q Consensus 82 ~~~~~~~~~----~w~~~~~DvV~~at~~~~s~~~~~~~l~~--G~k~V~lSa~~~d~~~~V~Gvn~~~~~~--~~~iIs 153 (341)
.. +.+++ +| .++|+||+|||+..+.+.+..++++ |..+++.+..+. .|..++.+|.+++.. ..++++
T Consensus 57 ~~--~~e~ll~~~~~--~~iDvV~~atp~~~h~~~a~~al~a~~Gk~Vi~ekp~~~-g~~~~p~v~~~~~~~~~~~~lva 131 (312)
T 1nvm_B 57 YA--GVEGLIKLPEF--ADIDFVFDATSASAHVQNEALLRQAKPGIRLIDLTPAAI-GPYCVPVVNLEEHLGKLNVNMVT 131 (312)
T ss_dssp SS--HHHHHHHSGGG--GGEEEEEECSCHHHHHHHHHHHHHHCTTCEEEECSTTCS-SCBCCHHHHTTTTTTCSEEECCC
T ss_pred cC--CHHHHHhccCC--CCCcEEEECCChHHHHHHHHHHHHhCCCCEEEEcCcccc-cccccCccCHHHHHhccCCcEEE
Confidence 00 11111 12 3789999999999999999999999 997777654332 233333445555431 236788
Q ss_pred CCCCccceecchhHHHhhhcceeEE-EEEEEeeccCcceeeeCCCCCCcccccccccccccccCChhHHHHHHhhhhc-C
Q 019445 154 NASCTTNCLAPLAKVIHDKFGIVEG-LMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALN-G 231 (341)
Q Consensus 154 np~C~tt~Lapllk~L~~~fgi~~~-~ittv~a~s~~~~~~d~~s~~~~~~gr~~~~niiP~~~g~~~~~~~~lpel~-~ 231 (341)
+|+|. ..|++..+.+.+..... .+.++.+.+ .+.+.....+-.+..++ +++ +.+.... +
T Consensus 132 ~~g~~---~ipl~~a~~~~~~~~~~~iv~~i~sgs-------------~G~~~~~~l~e~~~~~~--~ai-~~~gg~~~~ 192 (312)
T 1nvm_B 132 CGGQA---TIPMVAAVSRVAKVHYAEIVASISSKS-------------AGPGTRANIDEFTETTS--KAI-EVIGGAAKG 192 (312)
T ss_dssp HHHHH---HHHHHHHHHTTSCEEEEEEEEEEEGGG-------------SCHHHHTCHHHHHHHHH--HHH-HHTTCCSSE
T ss_pred eCCcc---cchHHHHhhhhccchhHhHhhhhhccc-------------cCCCcccchhhHHHHHH--HHH-HHhhhccCC
Confidence 88884 46788877777765422 223322211 01110111011111111 122 2222111 1
Q ss_pred c--eeEEEEEeeeeeEeeEEEEEEeCCCCCHHHHHHHHHHh
Q 019445 232 K--LTGMSFRVPTVDVSVVDLTVRLEKEATYEEIKNAIKEE 270 (341)
Q Consensus 232 ~--l~~~~~rVP~~~g~~~~l~v~l~~~~~~~ei~~~~~~a 270 (341)
| +.++++..|++ +..++|+.++ ..+.+++.+...+.
T Consensus 193 k~il~~~p~~~p~~--~~~tv~~~~~-~~~~~~~~~~~~~m 230 (312)
T 1nvm_B 193 KAIIIMNPAEPPLI--MRDTVYVLSA-AADQAAVAASVAEM 230 (312)
T ss_dssp EEEEEEECCSSCCC--EEEEEEEEES-SCCHHHHHHHHHHH
T ss_pred CcEEEEecCCCCcc--cceeEEEEeC-CCCHHHHHHHHHHH
Confidence 2 45677888887 7889999997 77877766665553
No 46
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=98.68 E-value=1.1e-07 Score=87.79 Aligned_cols=102 Identities=24% Similarity=0.271 Sum_probs=65.8
Q ss_pred CCCCCceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEE
Q 019445 1 MAGDKKIKIGINGF-GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPV 79 (341)
Q Consensus 1 ~~~~~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i 79 (341)
|++ .++||+|+|+ |++|+.+++.+.++|+++|+++.+...+.. . ..| .+.+. + +....+
T Consensus 1 ~~~-~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~-~----g~d--~~~~~-g-----------~~~~~v 60 (273)
T 1dih_A 1 MHD-ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSL-L----GSD--AGELA-G-----------AGKTGV 60 (273)
T ss_dssp -CC-CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTT-C----SCC--TTCSS-S-----------SSCCSC
T ss_pred CCC-CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhh-h----hhh--HHHHc-C-----------CCcCCc
Confidence 664 4589999999 999999999999999999999987622110 0 000 01110 0 000012
Q ss_pred EEEecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEec
Q 019445 80 AVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVIS 127 (341)
Q Consensus 80 ~v~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lS 127 (341)
.+.. +.+++ ..++|+|+++|......+.+..++++|...|+-+
T Consensus 61 ~~~~--dl~~~---l~~~DvVIDft~p~~~~~~~~~a~~~G~~vVigT 103 (273)
T 1dih_A 61 TVQS--SLDAV---KDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGT 103 (273)
T ss_dssp CEES--CSTTT---TTSCSEEEECSCHHHHHHHHHHHHHTTCEEEECC
T ss_pred eecC--CHHHH---hcCCCEEEEcCChHHHHHHHHHHHhCCCCEEEEC
Confidence 2222 34433 1378999999988888899999999998755433
No 47
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=98.65 E-value=4.1e-08 Score=91.95 Aligned_cols=91 Identities=22% Similarity=0.263 Sum_probs=62.1
Q ss_pred CCCCCceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEE
Q 019445 1 MAGDKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVA 80 (341)
Q Consensus 1 ~~~~~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~ 80 (341)
|+.|+++||||+|+|++|+.+++.|.++|+++|+++.++. .+... . +|- . ..
T Consensus 4 M~~M~~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~--~~~~~------~-~g~------------~-------~~ 55 (304)
T 3bio_A 4 MTDDKKIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRN--PAEVP------F-ELQ------------P-------FR 55 (304)
T ss_dssp ----CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC----------------CCT------------T-------SC
T ss_pred CccCCCCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCC--HHHHH------H-cCC------------C-------cC
Confidence 5556679999999999999999999999999999998862 21110 0 110 0 00
Q ss_pred EEecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEE
Q 019445 81 VFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVV 125 (341)
Q Consensus 81 v~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~ 125 (341)
.+. +..+. .++|+||.|||.....+.+.+++++|..+++
T Consensus 56 ~~~--~l~~~----~~~DvViiatp~~~h~~~~~~al~aG~~Vi~ 94 (304)
T 3bio_A 56 VVS--DIEQL----ESVDVALVCSPSREVERTALEILKKGICTAD 94 (304)
T ss_dssp EES--SGGGS----SSCCEEEECSCHHHHHHHHHHHHTTTCEEEE
T ss_pred CHH--HHHhC----CCCCEEEECCCchhhHHHHHHHHHcCCeEEE
Confidence 011 12111 3789999999999999999999999986554
No 48
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=98.59 E-value=3.3e-08 Score=91.79 Aligned_cols=99 Identities=19% Similarity=0.157 Sum_probs=66.0
Q ss_pred CCCCceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeCCCCC---hhhhhhhcccccccCcccCceeeecCCcceEECCE
Q 019445 2 AGDKKIKIGINGF-GRIGRLVARVALQRDDVELVAVNDPFIS---TDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEK 77 (341)
Q Consensus 2 ~~~~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~~~~~---~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~ 77 (341)
.+++|+||+|+|+ |++|+.+++++.++|++||+++.++... ++... .+. + +...
T Consensus 17 ~m~~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~g----------el~-G-----------~~~~ 74 (288)
T 3ijp_A 17 QGPGSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDAS----------ILI-G-----------SDFL 74 (288)
T ss_dssp ----CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGG----------GGT-T-----------CSCC
T ss_pred hccCCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchH----------Hhh-c-----------cCcC
Confidence 3456799999997 9999999999999999999999886321 11111 110 0 0000
Q ss_pred EEEEEecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEec
Q 019445 78 PVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVIS 127 (341)
Q Consensus 78 ~i~v~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lS 127 (341)
.++++. |++++ ..++|+|+++|+.....+.+..++++|...|+-|
T Consensus 75 gv~v~~--dl~~l---l~~aDVvIDFT~p~a~~~~~~~~l~~Gv~vViGT 119 (288)
T 3ijp_A 75 GVRITD--DPESA---FSNTEGILDFSQPQASVLYANYAAQKSLIHIIGT 119 (288)
T ss_dssp SCBCBS--CHHHH---TTSCSEEEECSCHHHHHHHHHHHHHHTCEEEECC
T ss_pred CceeeC--CHHHH---hcCCCEEEEcCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 122222 33332 1378999999998888899999999999777644
No 49
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=98.58 E-value=2.7e-08 Score=91.87 Aligned_cols=99 Identities=26% Similarity=0.301 Sum_probs=65.3
Q ss_pred CCceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEE
Q 019445 4 DKKIKIGINGF-GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (341)
Q Consensus 4 ~~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 82 (341)
|.|+||+|+|+ |++|+.+++++.++|++||+++.++..+.. . ..| .+.+. + + . ..+.++
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~-~----G~d--~gel~-g---------~--~-~gv~v~ 64 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQ-L----GQD--AGAFL-G---------K--Q-TGVALT 64 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTT-T----TSB--TTTTT-T---------C--C-CSCBCB
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCccc-c----ccc--HHHHh-C---------C--C-CCceec
Confidence 34689999997 999999999999999999999988632110 0 000 01111 0 0 0 011122
Q ss_pred ecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEec
Q 019445 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVIS 127 (341)
Q Consensus 83 ~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lS 127 (341)
. +.+++ ..++|+||++|+.....+.+..++++|.+.|+-+
T Consensus 65 ~--dl~~l---l~~~DVVIDfT~p~a~~~~~~~al~~G~~vVigT 104 (272)
T 4f3y_A 65 D--DIERV---CAEADYLIDFTLPEGTLVHLDAALRHDVKLVIGT 104 (272)
T ss_dssp C--CHHHH---HHHCSEEEECSCHHHHHHHHHHHHHHTCEEEECC
T ss_pred C--CHHHH---hcCCCEEEEcCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 1 23222 1368999999999999999999999999766544
No 50
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=98.43 E-value=3.4e-07 Score=87.54 Aligned_cols=99 Identities=19% Similarity=0.198 Sum_probs=63.0
Q ss_pred CCCCCceeEEEEccCHHHHHHHHHHHc-------CCCcEEEEeeCCCCCh-hhhhhhcccccccCcccCceeeecCCcce
Q 019445 1 MAGDKKIKIGINGFGRIGRLVARVALQ-------RDDVELVAVNDPFIST-DYMTYMFKYDSVHGQWKHNELKVKDEKTL 72 (341)
Q Consensus 1 ~~~~~~irV~I~G~G~iG~~llr~l~~-------~p~~elv~i~~~~~~~-~~~a~ll~~ds~~g~~~~~~v~~~~~~~l 72 (341)
|+.|.++||||+|+|++|+..++.+.. .|++||++|.|+..+. +.++..+....
T Consensus 20 ~~~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~------------------ 81 (393)
T 4fb5_A 20 FQSMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEK------------------ 81 (393)
T ss_dssp ----CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSE------------------
T ss_pred ccCCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCe------------------
Confidence 345667999999999999988876643 5678999999973332 22222111100
Q ss_pred EECCEEEEEEecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 73 LFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 73 ~i~g~~i~v~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
.+. |.+++ ..+.++|+|+-|||.....+.+.+++++|.. |.+=-|
T Consensus 82 --------~y~--d~~el-l~~~~iDaV~IatP~~~H~~~a~~al~aGkh-Vl~EKP 126 (393)
T 4fb5_A 82 --------ATA--DWRAL-IADPEVDVVSVTTPNQFHAEMAIAALEAGKH-VWCEKP 126 (393)
T ss_dssp --------EES--CHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTCE-EEECSC
T ss_pred --------ecC--CHHHH-hcCCCCcEEEECCChHHHHHHHHHHHhcCCe-EEEccC
Confidence 111 22221 1124789999999999999999999999974 444333
No 51
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=98.39 E-value=6.7e-07 Score=84.27 Aligned_cols=89 Identities=20% Similarity=0.253 Sum_probs=64.9
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEec
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 84 (341)
+++||||+|+|++|+.+++.+.++|+++++++.++.... .+ . + | +..+.
T Consensus 2 ~~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~-~~----~-------~----------------g--v~~~~- 50 (320)
T 1f06_A 2 TNIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL-DT----K-------T----------------P--VFDVA- 50 (320)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC-SS----S-------S----------------C--EEEGG-
T ss_pred CCCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH-hh----c-------C----------------C--CceeC-
Confidence 568999999999999999999999999999998862111 10 0 0 0 11121
Q ss_pred CCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 85 ~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
+.+++- .++|+|++|||.....+.+..++++|.. |+++.|
T Consensus 51 -d~~~ll---~~~DvViiatp~~~h~~~~~~al~aG~~-Vv~ekp 90 (320)
T 1f06_A 51 -DVDKHA---DDVDVLFLCMGSATDIPEQAPKFAQFAC-TVDTYD 90 (320)
T ss_dssp -GGGGTT---TTCSEEEECSCTTTHHHHHHHHHTTTSE-EECCCC
T ss_pred -CHHHHh---cCCCEEEEcCCcHHHHHHHHHHHHCCCE-EEECCC
Confidence 233331 3789999999999888999999999974 555544
No 52
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=98.38 E-value=4.1e-07 Score=86.25 Aligned_cols=95 Identities=19% Similarity=0.197 Sum_probs=64.7
Q ss_pred CceeEEEEccCHHHHH-HHHHHHcCCCcEEEEeeCCCCCh-hhhhhhcccccccCcccCceeeecCCcceEECCEEEEEE
Q 019445 5 KKIKIGINGFGRIGRL-VARVALQRDDVELVAVNDPFIST-DYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~-llr~l~~~p~~elv~i~~~~~~~-~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 82 (341)
.|+||||+|+|.+|+. +++++.++|+++|++|.|+..+. +.++. .||-- ..+
T Consensus 22 ~mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~------~~g~~--------------------~~y 75 (350)
T 4had_A 22 SMLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMAD------RFSVP--------------------HAF 75 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHH------HHTCS--------------------EEE
T ss_pred CccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHH------HcCCC--------------------eee
Confidence 4699999999999986 57889999999999999973221 22221 11100 011
Q ss_pred ecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 83 ~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
. |.+++ ....++|+|+-|||.....+.+.+++++|. .|.+=-|
T Consensus 76 ~--d~~el-l~~~~iDaV~I~tP~~~H~~~~~~al~aGk-hVl~EKP 118 (350)
T 4had_A 76 G--SYEEM-LASDVIDAVYIPLPTSQHIEWSIKAADAGK-HVVCEKP 118 (350)
T ss_dssp S--SHHHH-HHCSSCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred C--CHHHH-hcCCCCCEEEEeCCCchhHHHHHHHHhcCC-EEEEeCC
Confidence 1 22221 112478999999999999999999999996 3544433
No 53
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.35 E-value=6.4e-07 Score=84.51 Aligned_cols=98 Identities=17% Similarity=0.144 Sum_probs=65.8
Q ss_pred CCCCCceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCCh-hhhhhhcccccccCcccCceeeecCCcceEECCEEE
Q 019445 1 MAGDKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFIST-DYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPV 79 (341)
Q Consensus 1 ~~~~~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~-~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i 79 (341)
|++ +++||||+|+|.+|+.+++.|.++|++++++|.|+..+. +.++. .+|.-.
T Consensus 1 M~m-~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~------~~~~~~------------------- 54 (330)
T 3e9m_A 1 MSL-DKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAK------ELAIPV------------------- 54 (330)
T ss_dssp --C-CCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHH------HTTCCC-------------------
T ss_pred CCC-CeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHH------HcCCCc-------------------
Confidence 654 468999999999999999999999999999999873222 21111 111000
Q ss_pred EEEecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 80 AVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 80 ~v~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
.+. +.+++ ....++|+|+.|||.....+.+..++++|.. |++--|
T Consensus 55 -~~~--~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~-vl~EKP 99 (330)
T 3e9m_A 55 -AYG--SYEEL-CKDETIDIIYIPTYNQGHYSAAKLALSQGKP-VLLEKP 99 (330)
T ss_dssp -CBS--SHHHH-HHCTTCSEEEECCCGGGHHHHHHHHHHTTCC-EEECSS
T ss_pred -eeC--CHHHH-hcCCCCCEEEEcCCCHHHHHHHHHHHHCCCe-EEEeCC
Confidence 000 11111 0123789999999999999999999999965 545444
No 54
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=98.31 E-value=1.1e-06 Score=84.18 Aligned_cols=97 Identities=23% Similarity=0.319 Sum_probs=64.2
Q ss_pred CCCC-CceeEEEEccCHHHHH-HHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEE
Q 019445 1 MAGD-KKIKIGINGFGRIGRL-VARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKP 78 (341)
Q Consensus 1 ~~~~-~~irV~I~G~G~iG~~-llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~ 78 (341)
|+++ +|+||||+|+|++|+. .++.+.++|+++|++|.|+ +.+... .. +. +
T Consensus 1 M~~~~~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~------~~---~~-~---------------- 52 (364)
T 3e82_A 1 MSLSNNTINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASR--DEEKVK------RD---LP-D---------------- 52 (364)
T ss_dssp ------CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS--CHHHHH------HH---CT-T----------------
T ss_pred CCCCCCcceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcC--CHHHHH------hh---CC-C----------------
Confidence 5543 3589999999999996 8899999999999999987 222211 11 11 0
Q ss_pred EEEEecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 79 VAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 79 i~v~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
...+. +.+++ ....++|+|+.|||.....+.+.+++++|. .|.+--|
T Consensus 53 ~~~~~--~~~~l-l~~~~~D~V~i~tp~~~H~~~~~~al~aGk-~Vl~EKP 99 (364)
T 3e82_A 53 VTVIA--SPEAA-VQHPDVDLVVIASPNATHAPLARLALNAGK-HVVVDKP 99 (364)
T ss_dssp SEEES--CHHHH-HTCTTCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred CcEEC--CHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCCC-cEEEeCC
Confidence 01111 22222 012378999999999999999999999996 4554443
No 55
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.30 E-value=1.1e-06 Score=83.94 Aligned_cols=97 Identities=25% Similarity=0.333 Sum_probs=65.5
Q ss_pred CCCCCceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEE
Q 019445 1 MAGDKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVA 80 (341)
Q Consensus 1 ~~~~~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~ 80 (341)
|+ |.++||||+|+|.+|+..++.|.++|+++|++|.|.. .+.... . ..+|- .
T Consensus 1 M~-m~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~--~~~~~~-a---~~~g~---------------------~ 52 (359)
T 3e18_A 1 MS-LKKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDIL--AEKREA-A---AQKGL---------------------K 52 (359)
T ss_dssp ---CCCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSS--HHHHHH-H---HTTTC---------------------C
T ss_pred CC-CCcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCC--HHHHHH-H---HhcCC---------------------c
Confidence 54 3469999999999999999999999999999999873 222111 0 11110 0
Q ss_pred EEecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 81 VFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 81 v~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
.+. +.+++ ....++|+|+.|||.....+.+.+++++|. .|++--|
T Consensus 53 ~~~--~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-hVl~EKP 97 (359)
T 3e18_A 53 IYE--SYEAV-LADEKVDAVLIATPNDSHKELAISALEAGK-HVVCEKP 97 (359)
T ss_dssp BCS--CHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred eeC--CHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-CEEeeCC
Confidence 010 12221 012378999999999999999999999995 4555444
No 56
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=98.30 E-value=1.4e-06 Score=83.09 Aligned_cols=96 Identities=23% Similarity=0.294 Sum_probs=66.2
Q ss_pred CCCCCceeEEEEccCHHHHH-HHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEE
Q 019445 1 MAGDKKIKIGINGFGRIGRL-VARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPV 79 (341)
Q Consensus 1 ~~~~~~irV~I~G~G~iG~~-llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i 79 (341)
|++ .++||||+|+|.+|+. .++.+.++|+++|++|.|+ +.+..+. .++. .
T Consensus 1 M~m-~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~------~~~~--------------------~ 51 (358)
T 3gdo_A 1 MSL-DTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTS--RTEEVKR------DFPD--------------------A 51 (358)
T ss_dssp -CT-TCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECS--CHHHHHH------HCTT--------------------S
T ss_pred CCC-CcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcC--CHHHHHh------hCCC--------------------C
Confidence 553 4589999999999996 7899999999999999987 2222211 1100 1
Q ss_pred EEEecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 80 AVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 80 ~v~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
..+. +.+++ ....++|+|+.|||.....+.+.+++++|. .|.+--|
T Consensus 52 ~~~~--~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 97 (358)
T 3gdo_A 52 EVVH--ELEEI-TNDPAIELVIVTTPSGLHYEHTMACIQAGK-HVVMEKP 97 (358)
T ss_dssp EEES--STHHH-HTCTTCCEEEECSCTTTHHHHHHHHHHTTC-EEEEESS
T ss_pred ceEC--CHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHcCC-eEEEecC
Confidence 1121 23322 112479999999999999999999999995 4555444
No 57
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=98.29 E-value=7.2e-07 Score=80.94 Aligned_cols=82 Identities=20% Similarity=0.196 Sum_probs=57.8
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEec
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 84 (341)
.|+||+|+|+|++|+.+++++.++|+ +|+++.++..+. . + | ++++.
T Consensus 2 ~MmkI~ViGaGrMG~~i~~~l~~~~~-eLva~~d~~~~~-----------~---~----------------g--v~v~~- 47 (243)
T 3qy9_A 2 ASMKILLIGYGAMNQRVARLAEEKGH-EIVGVIENTPKA-----------T---T----------------P--YQQYQ- 47 (243)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEECSSCC----------------C----------------C--SCBCS-
T ss_pred CceEEEEECcCHHHHHHHHHHHhCCC-EEEEEEecCccc-----------c---C----------------C--CceeC-
Confidence 35799999999999999999999999 999998862110 0 0 0 11121
Q ss_pred CCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEec
Q 019445 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVIS 127 (341)
Q Consensus 85 ~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lS 127 (341)
+++++ . ++|+|+++|......+.+. +++|...|+-+
T Consensus 48 -dl~~l---~-~~DVvIDft~p~a~~~~~~--l~~g~~vVigT 83 (243)
T 3qy9_A 48 -HIADV---K-GADVAIDFSNPNLLFPLLD--EDFHLPLVVAT 83 (243)
T ss_dssp -CTTTC---T-TCSEEEECSCHHHHHHHHT--SCCCCCEEECC
T ss_pred -CHHHH---h-CCCEEEEeCChHHHHHHHH--HhcCCceEeCC
Confidence 44444 2 7899999988777666665 78888766543
No 58
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=98.29 E-value=8.3e-07 Score=83.61 Aligned_cols=98 Identities=16% Similarity=0.176 Sum_probs=64.5
Q ss_pred CCCCCceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCCh-hhhhhhcccccccCcccCceeeecCCcceEECCEEE
Q 019445 1 MAGDKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFIST-DYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPV 79 (341)
Q Consensus 1 ~~~~~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~-~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i 79 (341)
|++ .|+||||+|+|.+|+.+++.|.++|++++++|.++..+. +.++ ..+|.-
T Consensus 1 M~m-~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a------~~~~~~-------------------- 53 (329)
T 3evn_A 1 MSL-SKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFA------NKYHLP-------------------- 53 (329)
T ss_dssp -----CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---------CCCCS--------------------
T ss_pred CCC-CceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHH------HHcCCC--------------------
Confidence 553 468999999999999999999988999999999873221 1111 111100
Q ss_pred EEEecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 80 AVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 80 ~v~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
..+. +.+++- ...++|+|+.|||.....+.+.+++++|. .|++--|
T Consensus 54 ~~~~--~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~EKP 99 (329)
T 3evn_A 54 KAYD--KLEDML-ADESIDVIYVATINQDHYKVAKAALLAGK-HVLVEKP 99 (329)
T ss_dssp CEES--CHHHHH-TCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred cccC--CHHHHh-cCCCCCEEEECCCcHHHHHHHHHHHHCCC-eEEEccC
Confidence 0111 222221 12378999999999999999999999996 4555544
No 59
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.28 E-value=1.6e-06 Score=82.82 Aligned_cols=98 Identities=22% Similarity=0.210 Sum_probs=66.4
Q ss_pred CCCceeEEEEccCHHHHHHHHHHH-cCCCcEEEEeeCCCCCh-hhhhhhcccccccCcccCceeeecCCcceEECCEEEE
Q 019445 3 GDKKIKIGINGFGRIGRLVARVAL-QRDDVELVAVNDPFIST-DYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVA 80 (341)
Q Consensus 3 ~~~~irV~I~G~G~iG~~llr~l~-~~p~~elv~i~~~~~~~-~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~ 80 (341)
.|+++||||+|+|.+|+..++.|. .+|.++|++|.|+..+. +..+. .+|. ...
T Consensus 20 ~m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~------~~g~-------------------~~~ 74 (357)
T 3ec7_A 20 QGMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALD------KYAI-------------------EAK 74 (357)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHH------HHTC-------------------CCE
T ss_pred CCCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHH------HhCC-------------------CCe
Confidence 456799999999999999999998 78999999999873332 21111 1110 001
Q ss_pred EEecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 81 VFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 81 v~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
.+. +.+++ ....++|+|+.|||.....+.+.+++++|. .|.+--|
T Consensus 75 ~~~--~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~EKP 119 (357)
T 3ec7_A 75 DYN--DYHDL-INDKDVEVVIITASNEAHADVAVAALNANK-YVFCEKP 119 (357)
T ss_dssp EES--SHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred eeC--CHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-CEEeecC
Confidence 111 22221 012368999999999999999999999995 4555444
No 60
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.27 E-value=9.6e-07 Score=83.65 Aligned_cols=95 Identities=25% Similarity=0.352 Sum_probs=64.9
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEecC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 85 (341)
|+||||+|+|.+|+.+++.|.++|++++++|.|+. .+....+ ...+|.- ..+.
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~--~~~~~~~---~~~~~~~--------------------~~~~-- 54 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMIDDAILYAISDVR--EDRLREM---KEKLGVE--------------------KAYK-- 54 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSC--HHHHHHH---HHHHTCS--------------------EEES--
T ss_pred eeEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCC--HHHHHHH---HHHhCCC--------------------ceeC--
Confidence 58999999999999999999999999999999872 2211111 0111100 0111
Q ss_pred CCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 86 ~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
+.+++ ....++|+|+.|||.....+.+.+++++|. .|++--|
T Consensus 55 ~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~v~~EKP 96 (344)
T 3ezy_A 55 DPHEL-IEDPNVDAVLVCSSTNTHSELVIACAKAKK-HVFCEKP 96 (344)
T ss_dssp SHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESC
T ss_pred CHHHH-hcCCCCCEEEEcCCCcchHHHHHHHHhcCC-eEEEECC
Confidence 22221 012378999999999999999999999995 4555544
No 61
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=98.26 E-value=9.9e-07 Score=84.24 Aligned_cols=99 Identities=19% Similarity=0.244 Sum_probs=65.2
Q ss_pred CCCCCceeEEEEccCHHHHH-HHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEE
Q 019445 1 MAGDKKIKIGINGFGRIGRL-VARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPV 79 (341)
Q Consensus 1 ~~~~~~irV~I~G~G~iG~~-llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i 79 (341)
|+ |.++||||+|+|.+|+. +++.|.++|++++++|.|+ +.+....+ ...++. .
T Consensus 1 M~-M~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~---a~~~~~--------------------~ 54 (359)
T 3m2t_A 1 MS-LSLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDS--DLERARRV---HRFISD--------------------I 54 (359)
T ss_dssp ---CCCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECS--SHHHHGGG---GGTSCS--------------------C
T ss_pred CC-CCcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcC--CHHHHHHH---HHhcCC--------------------C
Confidence 54 34689999999999996 8999999999999999987 22211110 111110 0
Q ss_pred EEEecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 80 AVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 80 ~v~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
..+. +.+++- ...++|+|+.|||.....+.+.+++++|.. |.+--|
T Consensus 55 ~~~~--~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aGkh-Vl~EKP 100 (359)
T 3m2t_A 55 PVLD--NVPAML-NQVPLDAVVMAGPPQLHFEMGLLAMSKGVN-VFVEKP 100 (359)
T ss_dssp CEES--SHHHHH-HHSCCSEEEECSCHHHHHHHHHHHHHTTCE-EEECSC
T ss_pred cccC--CHHHHh-cCCCCCEEEEcCCcHHHHHHHHHHHHCCCe-EEEECC
Confidence 1111 222220 123789999999999999999999999964 555444
No 62
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=98.26 E-value=2.3e-06 Score=81.39 Aligned_cols=93 Identities=24% Similarity=0.427 Sum_probs=65.0
Q ss_pred CceeEEEEccCHHHHH-HHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEe
Q 019445 5 KKIKIGINGFGRIGRL-VARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG 83 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~-llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 83 (341)
+++||||+|+|.+|+. .++.+.++|+++|++|.|+ +.+... .. +. + ..++.
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~--~~~~~~------~~---~~-~----------------~~~~~ 57 (352)
T 3kux_A 6 DKIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSS--DASKVH------AD---WP-A----------------IPVVS 57 (352)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS--CHHHHH------TT---CS-S----------------CCEES
T ss_pred CCceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECC--CHHHHH------hh---CC-C----------------CceEC
Confidence 3589999999999997 8999999999999999987 232211 11 11 0 01111
Q ss_pred cCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 84 ~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
+.+++ ....++|+|+.|||.....+.+.+++++|. .|.+--|
T Consensus 58 --~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hV~~EKP 99 (352)
T 3kux_A 58 --DPQML-FNDPSIDLIVIPTPNDTHFPLAQSALAAGK-HVVVDKP 99 (352)
T ss_dssp --CHHHH-HHCSSCCEEEECSCTTTHHHHHHHHHHTTC-EEEECSS
T ss_pred --CHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCCC-cEEEECC
Confidence 22222 112379999999999999999999999995 4555444
No 63
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.24 E-value=1.4e-06 Score=81.26 Aligned_cols=94 Identities=19% Similarity=0.215 Sum_probs=64.5
Q ss_pred CCceeEEEEccCHHHHH-HHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEE
Q 019445 4 DKKIKIGINGFGRIGRL-VARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (341)
Q Consensus 4 ~~~irV~I~G~G~iG~~-llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 82 (341)
|+++||||+|+|.+|+. +++.|.++|++++++|.|+. .+....+ ...+|. ..+
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~--~~~~~~~---a~~~~~---------------------~~~ 57 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPN--KVKREKI---CSDYRI---------------------MPF 57 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSC--HHHHHHH---HHHHTC---------------------CBC
T ss_pred cccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCC--HHHHHHH---HHHcCC---------------------CCc
Confidence 45689999999999996 99999999999999999872 2211111 011110 001
Q ss_pred ecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 83 ~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
. +.+++ ..++|+|+.|||+....+.+..++++|.. |.+--|
T Consensus 58 ~--~~~~l---l~~~D~V~i~tp~~~h~~~~~~al~~gk~-vl~EKP 98 (308)
T 3uuw_A 58 D--SIESL---AKKCDCIFLHSSTETHYEIIKILLNLGVH-VYVDKP 98 (308)
T ss_dssp S--CHHHH---HTTCSEEEECCCGGGHHHHHHHHHHTTCE-EEECSS
T ss_pred C--CHHHH---HhcCCEEEEeCCcHhHHHHHHHHHHCCCc-EEEcCC
Confidence 0 22222 12789999999999999999999999974 555444
No 64
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=98.24 E-value=1.6e-06 Score=82.86 Aligned_cols=96 Identities=21% Similarity=0.275 Sum_probs=65.6
Q ss_pred CCCCCceeEEEEccCHHHHH-HHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEE
Q 019445 1 MAGDKKIKIGINGFGRIGRL-VARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPV 79 (341)
Q Consensus 1 ~~~~~~irV~I~G~G~iG~~-llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i 79 (341)
|++ .|+||||+|+|.+|+. .++.+.++|+++|++|.|+..+ ..+ .. |. + .
T Consensus 1 M~~-~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~--~~~------~~---~~---------------~--~ 51 (362)
T 3fhl_A 1 MSL-EIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKE--LSK------ER---YP---------------Q--A 51 (362)
T ss_dssp --C-CCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCC--GGG------TT---CT---------------T--S
T ss_pred CCC-CceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHH--HHH------Hh---CC---------------C--C
Confidence 653 4699999999999997 8899999999999999987322 111 11 11 0 1
Q ss_pred EEEecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 80 AVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 80 ~v~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
..+. +.+++ ....++|+|+.|||.....+.+.+++++|. .|.+--|
T Consensus 52 ~~~~--~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 97 (362)
T 3fhl_A 52 SIVR--SFKEL-TEDPEIDLIVVNTPDNTHYEYAGMALEAGK-NVVVEKP 97 (362)
T ss_dssp EEES--CSHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred ceEC--CHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCCC-eEEEecC
Confidence 1121 23322 112369999999999999999999999996 4555444
No 65
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.24 E-value=1.8e-06 Score=82.01 Aligned_cols=95 Identities=14% Similarity=0.160 Sum_probs=65.5
Q ss_pred CCceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCCh-hhhhhhcccccccCcccCceeeecCCcceEECCEEEEEE
Q 019445 4 DKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFIST-DYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (341)
Q Consensus 4 ~~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~-~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 82 (341)
|+++||||+|+|.+|+.+++.+.++|+++|++|.|+..+. +..+. .+|- ..+
T Consensus 3 ~~~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~------~~g~---------------------~~~ 55 (354)
T 3db2_A 3 YNPVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGK------RYNC---------------------AGD 55 (354)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHH------HHTC---------------------CCC
T ss_pred CCcceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHH------HcCC---------------------CCc
Confidence 3568999999999999999999999999999999872221 11111 1110 000
Q ss_pred ecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 83 ~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
. +.+++ ....++|+|+.|||.....+.+.+++++|.. |.+--|
T Consensus 56 ~--~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~-vl~EKP 98 (354)
T 3db2_A 56 A--TMEAL-LAREDVEMVIITVPNDKHAEVIEQCARSGKH-IYVEKP 98 (354)
T ss_dssp S--SHHHH-HHCSSCCEEEECSCTTSHHHHHHHHHHTTCE-EEEESS
T ss_pred C--CHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcCCE-EEEccC
Confidence 0 11211 0124789999999999999999999999954 555544
No 66
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.23 E-value=2.1e-06 Score=80.37 Aligned_cols=95 Identities=19% Similarity=0.237 Sum_probs=63.3
Q ss_pred CCCCCceeEEEEccCHHHHH-HHHHHHcCCCcEEEEeeCCCCCh-hhhhhhcccccccCcccCceeeecCCcceEECCEE
Q 019445 1 MAGDKKIKIGINGFGRIGRL-VARVALQRDDVELVAVNDPFIST-DYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKP 78 (341)
Q Consensus 1 ~~~~~~irV~I~G~G~iG~~-llr~l~~~p~~elv~i~~~~~~~-~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~ 78 (341)
|++ .++||||+|+|.+|+. +++.|.++|+++++++.|+..+. +.++. .+|
T Consensus 1 m~m-~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~------~~g--------------------- 52 (319)
T 1tlt_A 1 MSL-KKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICE------SWR--------------------- 52 (319)
T ss_dssp -----CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHH------HHT---------------------
T ss_pred CCC-CcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHH------HcC---------------------
Confidence 543 4689999999999996 89999988999999999873322 21111 010
Q ss_pred EEEEecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 79 VAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 79 i~v~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
+..+. +.+.+ ..++|+|+.|||.....+.+..++++|.. |++--|
T Consensus 53 ~~~~~--~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~G~~-v~~eKP 97 (319)
T 1tlt_A 53 IPYAD--SLSSL---AASCDAVFVHSSTASHFDVVSTLLNAGVH-VCVDKP 97 (319)
T ss_dssp CCBCS--SHHHH---HTTCSEEEECSCTTHHHHHHHHHHHTTCE-EEEESS
T ss_pred CCccC--cHHHh---hcCCCEEEEeCCchhHHHHHHHHHHcCCe-EEEeCC
Confidence 00010 12222 23789999999999999999999999974 444433
No 67
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.22 E-value=1.5e-06 Score=81.76 Aligned_cols=94 Identities=24% Similarity=0.337 Sum_probs=64.6
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEec
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 84 (341)
||+||||+|+|.+|+.+++.|.++|++++++|.|+. .+....+. .. +. +. +.
T Consensus 2 m~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~--~~~~~~~~---~~---~~------------------~~-~~- 53 (331)
T 4hkt_A 2 MTVRFGLLGAGRIGKVHAKAVSGNADARLVAVADAF--PAAAEAIA---GA---YG------------------CE-VR- 53 (331)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSS--HHHHHHHH---HH---TT------------------CE-EC-
T ss_pred CceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCC--HHHHHHHH---HH---hC------------------CC-cC-
Confidence 368999999999999999999999999999999872 22111110 00 00 01 11
Q ss_pred CCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 85 ~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
+.+++ ....++|+|+.|||.....+.+..++++|. .|.+--|
T Consensus 54 -~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~v~~EKP 95 (331)
T 4hkt_A 54 -TIDAI-EAAADIDAVVICTPTDTHADLIERFARAGK-AIFCEKP 95 (331)
T ss_dssp -CHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred -CHHHH-hcCCCCCEEEEeCCchhHHHHHHHHHHcCC-cEEEecC
Confidence 22221 012378999999999999999999999995 4555444
No 68
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.22 E-value=2e-06 Score=81.35 Aligned_cols=94 Identities=24% Similarity=0.439 Sum_probs=65.1
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEecC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 85 (341)
|+||||+|+|.+|+.+++.|.++|++++++|.|+. .+....+ ...+| ...+.
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~--~~~~~~~---a~~~g---------------------~~~~~-- 55 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAANPDLELVVIADPF--IEGAQRL---AEANG---------------------AEAVA-- 55 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSS--HHHHHHH---HHTTT---------------------CEEES--
T ss_pred ceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCC--HHHHHHH---HHHcC---------------------CceeC--
Confidence 58999999999999999999999999999999872 2211110 01111 01111
Q ss_pred CCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 86 ~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
+.+++ ....++|+|+.|||.....+.+..++++|.. |++--|
T Consensus 56 ~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~-v~~EKP 97 (344)
T 3euw_A 56 SPDEV-FARDDIDGIVIGSPTSTHVDLITRAVERGIP-ALCEKP 97 (344)
T ss_dssp SHHHH-TTCSCCCEEEECSCGGGHHHHHHHHHHTTCC-EEECSC
T ss_pred CHHHH-hcCCCCCEEEEeCCchhhHHHHHHHHHcCCc-EEEECC
Confidence 22221 0123789999999999999999999999964 555444
No 69
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=98.22 E-value=1.6e-06 Score=82.37 Aligned_cols=95 Identities=19% Similarity=0.280 Sum_probs=65.3
Q ss_pred ceeEEEEccCHHHH-HHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEec
Q 019445 6 KIKIGINGFGRIGR-LVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (341)
Q Consensus 6 ~irV~I~G~G~iG~-~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 84 (341)
|+||||+|+|.+|+ ..++.+.++|+++|++|.++. ..+.++. .++.. + +..+.
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~-~~~~~a~------~~~~~----------------~--~~~~~- 55 (349)
T 3i23_A 2 TVKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH-VNEKAAA------PFKEK----------------G--VNFTA- 55 (349)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT-CCHHHHH------HHHTT----------------T--CEEES-
T ss_pred eeEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC-HHHHHHH------hhCCC----------------C--CeEEC-
Confidence 58999999999998 688889899999999999974 2222211 11000 0 11121
Q ss_pred CCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 85 ~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
+.+++- ...++|+|+.|||.....+.+.+++++|. .|.+--|
T Consensus 56 -~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~EKP 97 (349)
T 3i23_A 56 -DLNELL-TDPEIELITICTPAHTHYDLAKQAILAGK-SVIVEKP 97 (349)
T ss_dssp -CTHHHH-SCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred -CHHHHh-cCCCCCEEEEeCCcHHHHHHHHHHHHcCC-EEEEECC
Confidence 233321 12479999999999999999999999995 4555433
No 70
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=98.21 E-value=1.2e-06 Score=82.75 Aligned_cols=90 Identities=19% Similarity=0.178 Sum_probs=65.0
Q ss_pred CCCceeEEEEccCHHHH-HHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEE
Q 019445 3 GDKKIKIGINGFGRIGR-LVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAV 81 (341)
Q Consensus 3 ~~~~irV~I~G~G~iG~-~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v 81 (341)
.|.++||||+|+|.+|+ ..++.+.++|+++|++|.|+..+. +. ++.
T Consensus 22 ~M~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~---------------~g------------------~~~ 68 (330)
T 4ew6_A 22 SMSPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTV---------------EG------------------VNS 68 (330)
T ss_dssp CCCCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCC---------------TT------------------SEE
T ss_pred cCCCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhh---------------cC------------------CCc
Confidence 45579999999999999 799999999999999999872110 00 011
Q ss_pred EecCCCCCCCccC-CCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 82 FGFRNPEEIPWAK-TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 82 ~~~~~~~~~~w~~-~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
+. +.+++ ... .++|+|+.|||.....+.+.+++++|. .|.+--|
T Consensus 69 ~~--~~~~l-l~~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 113 (330)
T 4ew6_A 69 YT--TIEAM-LDAEPSIDAVSLCMPPQYRYEAAYKALVAGK-HVFLEKP 113 (330)
T ss_dssp ES--SHHHH-HHHCTTCCEEEECSCHHHHHHHHHHHHHTTC-EEEECSS
T ss_pred cC--CHHHH-HhCCCCCCEEEEeCCcHHHHHHHHHHHHcCC-cEEEeCC
Confidence 11 22221 011 378999999999999999999999995 4555443
No 71
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=98.21 E-value=5.9e-07 Score=85.77 Aligned_cols=96 Identities=15% Similarity=0.109 Sum_probs=64.9
Q ss_pred CCceeEEEEccCHHHHHHHHHHHcCCCc-------EEEEeeCCCCCh-hhhhhhcccccccCcccCceeeecCCcceEEC
Q 019445 4 DKKIKIGINGFGRIGRLVARVALQRDDV-------ELVAVNDPFIST-DYMTYMFKYDSVHGQWKHNELKVKDEKTLLFG 75 (341)
Q Consensus 4 ~~~irV~I~G~G~iG~~llr~l~~~p~~-------elv~i~~~~~~~-~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~ 75 (341)
|.++||||+|+|++|+..++.+.+.|.+ ||++|.|+..+. +..+. .||.-
T Consensus 4 M~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~------~~g~~---------------- 61 (390)
T 4h3v_A 4 MTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAG------KLGWS---------------- 61 (390)
T ss_dssp CCEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHH------HHTCS----------------
T ss_pred CCcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHH------HcCCC----------------
Confidence 5679999999999999999998877643 999999973221 21111 11100
Q ss_pred CEEEEEEecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 76 EKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 76 g~~i~v~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
.++. |.+++ ....++|+|+-|||.....+.+.+++++|. .|.+=-|
T Consensus 62 ----~~~~--d~~~l-l~~~~iDaV~I~tP~~~H~~~~~~al~aGk-hVl~EKP 107 (390)
T 4h3v_A 62 ----TTET--DWRTL-LERDDVQLVDVCTPGDSHAEIAIAALEAGK-HVLCEKP 107 (390)
T ss_dssp ----EEES--CHHHH-TTCTTCSEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred ----cccC--CHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcCC-CceeecC
Confidence 1111 22221 113479999999999999999999999996 4555444
No 72
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=98.19 E-value=2e-06 Score=81.07 Aligned_cols=94 Identities=21% Similarity=0.200 Sum_probs=64.0
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCC--CcEEEEeeCCCCCh-hhhhhhcccccccCcccCceeeecCCcceEECCEEEEEE
Q 019445 6 KIKIGINGFGRIGRLVARVALQRD--DVELVAVNDPFIST-DYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p--~~elv~i~~~~~~~-~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 82 (341)
|+||||+|+|.+|+.+++.|.+.| +++|++|.|+..+. +.++. .+|.. ..+
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~------~~~~~--------------------~~~ 55 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQ------KHDIP--------------------KAY 55 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHH------HHTCS--------------------CEE
T ss_pred ccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHH------HcCCC--------------------ccc
Confidence 589999999999999999998877 47999999873221 11111 11100 001
Q ss_pred ecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 83 ~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
. +.+++ ....++|+|+.|||+....+.+.+++++|. .|.+--|
T Consensus 56 ~--~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~~Gk-hVl~EKP 98 (334)
T 3ohs_X 56 G--SYEEL-AKDPNVEVAYVGTQHPQHKAAVMLCLAAGK-AVLCEKP 98 (334)
T ss_dssp S--SHHHH-HHCTTCCEEEECCCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred C--CHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHhcCC-EEEEECC
Confidence 1 12221 012378999999999999999999999995 4655544
No 73
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=98.18 E-value=1.7e-06 Score=82.49 Aligned_cols=100 Identities=14% Similarity=0.228 Sum_probs=64.8
Q ss_pred CCCceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCCh-hhhhhhcccccccCcccCceeeecCCcceEECCEEEEE
Q 019445 3 GDKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFIST-DYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAV 81 (341)
Q Consensus 3 ~~~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~-~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v 81 (341)
++.++||||+|+|.+|+.+++.|.++|++++++|.++..+. +.++ ..+|... . ...
T Consensus 3 ~~~~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a------~~~~~~~--------~---------~~~ 59 (362)
T 1ydw_A 3 TETQIRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFA------TANNYPE--------S---------TKI 59 (362)
T ss_dssp ---CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHH------HHTTCCT--------T---------CEE
T ss_pred CCCceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHH------HHhCCCC--------C---------Cee
Confidence 34568999999999999999999999999999999873221 1111 1111000 0 011
Q ss_pred EecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 82 FGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 82 ~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
+. +.+++ ....++|+|+.|||.....+.+.+++++|.. |++--|
T Consensus 60 ~~--~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk~-V~~EKP 103 (362)
T 1ydw_A 60 HG--SYESL-LEDPEIDALYVPLPTSLHVEWAIKAAEKGKH-ILLEKP 103 (362)
T ss_dssp ES--SHHHH-HHCTTCCEEEECCCGGGHHHHHHHHHTTTCE-EEECSS
T ss_pred eC--CHHHH-hcCCCCCEEEEcCChHHHHHHHHHHHHCCCe-EEEecC
Confidence 11 22221 0123689999999999999999999999964 444433
No 74
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.18 E-value=1.9e-06 Score=81.93 Aligned_cols=95 Identities=21% Similarity=0.242 Sum_probs=65.2
Q ss_pred CceeEEEEccCHHHHHHHHHHHcC-CCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEe
Q 019445 5 KKIKIGINGFGRIGRLVARVALQR-DDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG 83 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~-p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 83 (341)
+|+||||+|+|.+|+.+++.+.++ |.++++++.|+. .+....+. ..+| +..+.
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~--~~~~~~~~---~~~~---------------------~~~~~ 65 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEKHADRAELIDVCDID--PAALKAAV---ERTG---------------------ARGHA 65 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSS--HHHHHHHH---HHHC---------------------CEEES
T ss_pred CcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCC--HHHHHHHH---HHcC---------------------CceeC
Confidence 468999999999999999999988 899999999872 22111100 0110 11121
Q ss_pred cCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 84 ~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
+.+++ ....++|+|+.|||.....+.+.+++++|. .|++--|
T Consensus 66 --~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~v~~EKP 107 (354)
T 3q2i_A 66 --SLTDM-LAQTDADIVILTTPSGLHPTQSIECSEAGF-HVMTEKP 107 (354)
T ss_dssp --CHHHH-HHHCCCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred --CHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCCC-CEEEeCC
Confidence 22222 112378999999999999999999999995 4555444
No 75
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.18 E-value=1.6e-06 Score=82.54 Aligned_cols=98 Identities=14% Similarity=0.144 Sum_probs=65.1
Q ss_pred CCCCceeEEEEccCHHHH-HHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEE
Q 019445 2 AGDKKIKIGINGFGRIGR-LVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVA 80 (341)
Q Consensus 2 ~~~~~irV~I~G~G~iG~-~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~ 80 (341)
+.|.++||||+|+|.+|+ .+++.|.++|+++|++|.|+. .+....+ ...+| +.
T Consensus 23 ~~m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~--~~~~~~~---a~~~g---------------------~~ 76 (350)
T 3rc1_A 23 ANANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRR--WDRAKRF---TERFG---------------------GE 76 (350)
T ss_dssp ---CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESS--HHHHHHH---HHHHC---------------------SE
T ss_pred CCCCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCC--HHHHHHH---HHHcC---------------------CC
Confidence 345679999999999998 799999999999999999872 2211110 01111 01
Q ss_pred EEecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 81 VFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 81 v~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
.+. +.+++ ....++|+|+.|||.....+.+.+++++|.. |++--|
T Consensus 77 ~~~--~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk~-Vl~EKP 121 (350)
T 3rc1_A 77 PVE--GYPAL-LERDDVDAVYVPLPAVLHAEWIDRALRAGKH-VLAEKP 121 (350)
T ss_dssp EEE--SHHHH-HTCTTCSEEEECCCGGGHHHHHHHHHHTTCE-EEEESS
T ss_pred CcC--CHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCCCc-EEEeCC
Confidence 111 22222 0123789999999999999999999999964 544433
No 76
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=98.17 E-value=1.2e-06 Score=85.14 Aligned_cols=95 Identities=19% Similarity=0.207 Sum_probs=63.8
Q ss_pred CceeEEEEccCHHHHHHHHHHHcC--------CCcEEEEeeCCCCCh-hhhhhhcccccccCcccCceeeecCCcceEEC
Q 019445 5 KKIKIGINGFGRIGRLVARVALQR--------DDVELVAVNDPFIST-DYMTYMFKYDSVHGQWKHNELKVKDEKTLLFG 75 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~--------p~~elv~i~~~~~~~-~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~ 75 (341)
.++||||+|+|++|+..++.+.+. +++||++|.|+..+. +..+. .+|.-
T Consensus 25 ~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~------~~~~~---------------- 82 (412)
T 4gqa_A 25 ARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAA------KLGAE---------------- 82 (412)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHH------HHTCS----------------
T ss_pred ccceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHH------HcCCC----------------
Confidence 369999999999999999988764 357999999973221 21111 11100
Q ss_pred CEEEEEEecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 76 EKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 76 g~~i~v~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
.++. |.+++ ....++|+|+-|||.....+.+.+++++|. .|.+--|
T Consensus 83 ----~~y~--d~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKP 128 (412)
T 4gqa_A 83 ----KAYG--DWREL-VNDPQVDVVDITSPNHLHYTMAMAAIAAGK-HVYCEKP 128 (412)
T ss_dssp ----EEES--SHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESC
T ss_pred ----eEEC--CHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHcCC-CeEeecC
Confidence 1111 22221 112478999999999999999999999996 4555544
No 77
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.16 E-value=3e-06 Score=80.23 Aligned_cols=96 Identities=19% Similarity=0.224 Sum_probs=65.0
Q ss_pred ceeEEEEccCHHHHHHHHHHH-cCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEec
Q 019445 6 KIKIGINGFGRIGRLVARVAL-QRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~-~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 84 (341)
|+||||+|+|.+|+.+++.+. .+|+++|++|.|+. .+....+ ...+|. ....+.
T Consensus 2 ~~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~--~~~~~~~---~~~~g~-------------------~~~~~~- 56 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVN--QEAAQKV---VEQYQL-------------------NATVYP- 56 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSS--HHHHHHH---HHHTTC-------------------CCEEES-
T ss_pred eEEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCC--HHHHHHH---HHHhCC-------------------CCeeeC-
Confidence 589999999999999999999 78999999999872 2211110 111110 001111
Q ss_pred CCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 85 ~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
+.+++ ....++|+|+.|||.....+.+.+++++|. .|++--|
T Consensus 57 -~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~vl~EKP 98 (344)
T 3mz0_A 57 -NDDSL-LADENVDAVLVTSWGPAHESSVLKAIKAQK-YVFCEKP 98 (344)
T ss_dssp -SHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred -CHHHH-hcCCCCCEEEECCCchhHHHHHHHHHHCCC-cEEEcCC
Confidence 22221 012368999999999999999999999995 4555544
No 78
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=98.14 E-value=3.8e-06 Score=79.59 Aligned_cols=94 Identities=16% Similarity=0.226 Sum_probs=63.8
Q ss_pred ceeEEEEccCHHHHH-HHH-HHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEe
Q 019445 6 KIKIGINGFGRIGRL-VAR-VALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG 83 (341)
Q Consensus 6 ~irV~I~G~G~iG~~-llr-~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 83 (341)
|+||||+|+|.+|+. .++ ++..+|+++|++|.|+..+....+ . .+. + +..+.
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~------~---~~~---------------~--~~~~~ 55 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQA------P---IYS---------------H--IHFTS 55 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGS------G---GGT---------------T--CEEES
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHH------H---hcC---------------C--CceEC
Confidence 589999999999985 788 667889999999999733221100 0 111 0 11221
Q ss_pred cCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 84 ~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
+.+++ ....++|+|+.|||.....+.+.+++++|. .|++--|
T Consensus 56 --~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~EKP 97 (345)
T 3f4l_A 56 --DLDEV-LNDPDVKLVVVCTHADSHFEYAKRALEAGK-NVLVEKP 97 (345)
T ss_dssp --CTHHH-HTCTTEEEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred --CHHHH-hcCCCCCEEEEcCChHHHHHHHHHHHHcCC-cEEEeCC
Confidence 33332 112369999999999999999999999995 4554443
No 79
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=98.13 E-value=2.9e-06 Score=80.35 Aligned_cols=100 Identities=23% Similarity=0.218 Sum_probs=66.0
Q ss_pred CCCCCceeEEEEccC-HHHHHHHHHHHcC-CCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEE
Q 019445 1 MAGDKKIKIGINGFG-RIGRLVARVALQR-DDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKP 78 (341)
Q Consensus 1 ~~~~~~irV~I~G~G-~iG~~llr~l~~~-p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~ 78 (341)
|..+.++||||+|+| .+|+..++.+.+. |.++|++|.|+. .+....+ ...+|.
T Consensus 13 ~~~~~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~--~~~~~~~---a~~~~~-------------------- 67 (340)
T 1zh8_A 13 MKPLRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRT--RSHAEEF---AKMVGN-------------------- 67 (340)
T ss_dssp ---CCCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSS--HHHHHHH---HHHHSS--------------------
T ss_pred cCCCCceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCC--HHHHHHH---HHHhCC--------------------
Confidence 444567999999999 8999999999998 899999999972 2211111 011110
Q ss_pred EEEEecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 79 VAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 79 i~v~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
..++. +.+++ ....++|+|+.|||.....+.+.+++++|. .|.+--|
T Consensus 68 ~~~~~--~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 114 (340)
T 1zh8_A 68 PAVFD--SYEEL-LESGLVDAVDLTLPVELNLPFIEKALRKGV-HVICEKP 114 (340)
T ss_dssp CEEES--CHHHH-HHSSCCSEEEECCCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred CcccC--CHHHH-hcCCCCCEEEEeCCchHHHHHHHHHHHCCC-cEEEeCC
Confidence 01111 22221 112378999999999999999999999996 4555444
No 80
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=98.12 E-value=4.9e-06 Score=81.54 Aligned_cols=100 Identities=13% Similarity=0.085 Sum_probs=65.9
Q ss_pred CCCceeEEEEccCHHHH-HHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEE
Q 019445 3 GDKKIKIGINGFGRIGR-LVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAV 81 (341)
Q Consensus 3 ~~~~irV~I~G~G~iG~-~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v 81 (341)
.|.++||||+|+|.+|+ .+++.|.++++++|++|.|.. .+.... +...+|.-. . .+.+
T Consensus 80 ~~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~--~~~~~~---~a~~~g~~~-~---------------~~~~ 138 (433)
T 1h6d_A 80 EDRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGN--AEKAKI---VAAEYGVDP-R---------------KIYD 138 (433)
T ss_dssp CCCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSC--HHHHHH---HHHHTTCCG-G---------------GEEC
T ss_pred CCCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCC--HHHHHH---HHHHhCCCc-c---------------cccc
Confidence 45679999999999997 899999998999999999872 221111 011111100 0 0111
Q ss_pred EecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEec
Q 019445 82 FGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVIS 127 (341)
Q Consensus 82 ~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lS 127 (341)
+. +.+++- ...++|+|+.|||.....+.+..++++|.. |++-
T Consensus 139 ~~--~~~~ll-~~~~vD~V~iatp~~~h~~~~~~al~aGk~-Vl~E 180 (433)
T 1h6d_A 139 YS--NFDKIA-KDPKIDAVYIILPNSLHAEFAIRAFKAGKH-VMCE 180 (433)
T ss_dssp SS--SGGGGG-GCTTCCEEEECSCGGGHHHHHHHHHHTTCE-EEEC
T ss_pred cC--CHHHHh-cCCCCCEEEEcCCchhHHHHHHHHHHCCCc-EEEc
Confidence 11 223321 123799999999999999999999999964 4443
No 81
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=98.10 E-value=4.9e-06 Score=78.57 Aligned_cols=98 Identities=19% Similarity=0.215 Sum_probs=59.5
Q ss_pred CCceeEEEEccCHHHHHHHHHHHcC------CCcEEEEeeCCCCChh----hhhhhcccccccCcccCceeeecCCcceE
Q 019445 4 DKKIKIGINGFGRIGRLVARVALQR------DDVELVAVNDPFISTD----YMTYMFKYDSVHGQWKHNELKVKDEKTLL 73 (341)
Q Consensus 4 ~~~irV~I~G~G~iG~~llr~l~~~------p~~elv~i~~~~~~~~----~~a~ll~~ds~~g~~~~~~v~~~~~~~l~ 73 (341)
|.++||||+|+|.+|+.+++.|.++ ++++|++|.++....- .....+.....+|.+. ..
T Consensus 2 Mk~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~----------~~- 70 (325)
T 3ing_A 2 MKEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRIS----------DR- 70 (325)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSC----------SS-
T ss_pred CceEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCC----------cc-
Confidence 5679999999999999999999876 7899999998732110 0000000000001110 00
Q ss_pred ECCEEEEEEecCCCCCCCccCCCccEEEecCCCccC----HHHHHHHHhCCCcE
Q 019445 74 FGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTD----KDKAAAHLKGGAKK 123 (341)
Q Consensus 74 i~g~~i~v~~~~~~~~~~w~~~~~DvV~~at~~~~s----~~~~~~~l~~G~k~ 123 (341)
.+ +..++ ....++|+|++|||+... .+.+.+++++|..+
T Consensus 71 -------~~---d~~e~-l~~~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhV 113 (325)
T 3ing_A 71 -------AF---SGPED-LMGEAADLLVDCTPASRDGVREYSLYRMAFESGMNV 113 (325)
T ss_dssp -------BC---CSGGG-GTTSCCSEEEECCCCCSSSHHHHHHHHHHHHTTCEE
T ss_pred -------cC---CHHHH-hcCCCCCEEEECCCCccccchHHHHHHHHHHCCCeE
Confidence 00 11111 012478999999997543 57888999999843
No 82
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.08 E-value=5.7e-06 Score=77.59 Aligned_cols=94 Identities=21% Similarity=0.278 Sum_probs=64.2
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEecC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 85 (341)
|+||||+|+|.+|+.+++.|.++|++++++|.++. .+.... +...+|. ...+.
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~--~~~~~~---~~~~~~~--------------------~~~~~-- 53 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRK--LETAAT---FASRYQN--------------------IQLFD-- 53 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSS--HHHHHH---HGGGSSS--------------------CEEES--
T ss_pred CeEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCC--HHHHHH---HHHHcCC--------------------CeEeC--
Confidence 47999999999999999999999999999999862 221111 0111110 01111
Q ss_pred CCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 86 ~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
+.+++- ..++|+|+.|||.....+.+.+++++|.. |.+--|
T Consensus 54 ~~~~~l--~~~~D~V~i~tp~~~h~~~~~~al~~gk~-V~~EKP 94 (325)
T 2ho3_A 54 QLEVFF--KSSFDLVYIASPNSLHFAQAKAALSAGKH-VILEKP 94 (325)
T ss_dssp CHHHHH--TSSCSEEEECSCGGGHHHHHHHHHHTTCE-EEEESS
T ss_pred CHHHHh--CCCCCEEEEeCChHHHHHHHHHHHHcCCc-EEEecC
Confidence 222221 14789999999999999999999999964 444433
No 83
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=98.07 E-value=4.9e-06 Score=78.53 Aligned_cols=94 Identities=17% Similarity=0.242 Sum_probs=63.1
Q ss_pred CceeEEEEccCHHHHHHHHHHH-cCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEe
Q 019445 5 KKIKIGINGFGRIGRLVARVAL-QRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG 83 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~-~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 83 (341)
.++||||+|+|.+|+.+++.|. +++.+++++|.|+. .+....+ ...+|. ..++.
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~--~~~~~~~---a~~~g~--------------------~~~~~ 61 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALD--SNQLEWA---KNELGV--------------------ETTYT 61 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSC--HHHHHHH---HHTTCC--------------------SEEES
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCC--HHHHHHH---HHHhCC--------------------CcccC
Confidence 4689999999999999999998 88899999999872 2211110 011110 01111
Q ss_pred cCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEec
Q 019445 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVIS 127 (341)
Q Consensus 84 ~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lS 127 (341)
+.+++ ....++|+|+.|||.....+.+.+++++|. .|++-
T Consensus 62 --~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~G~-~v~~e 101 (346)
T 3cea_A 62 --NYKDM-IDTENIDAIFIVAPTPFHPEMTIYAMNAGL-NVFCE 101 (346)
T ss_dssp --CHHHH-HTTSCCSEEEECSCGGGHHHHHHHHHHTTC-EEEEC
T ss_pred --CHHHH-hcCCCCCEEEEeCChHhHHHHHHHHHHCCC-EEEEc
Confidence 12221 011378999999999999999999999995 45443
No 84
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=98.07 E-value=7.2e-06 Score=80.53 Aligned_cols=95 Identities=20% Similarity=0.276 Sum_probs=62.8
Q ss_pred CCCceeEEEEccCHHHHHHHHHHHcC---------CCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceE
Q 019445 3 GDKKIKIGINGFGRIGRLVARVALQR---------DDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLL 73 (341)
Q Consensus 3 ~~~~irV~I~G~G~iG~~llr~l~~~---------p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~ 73 (341)
+|.++||||+|+|.+|+.+++.|.+| ++++|++|.++. .+.....+ . +
T Consensus 7 MMk~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~--~~~~~~~~---------~-~----------- 63 (444)
T 3mtj_A 7 GMKPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRN--LDKAEALA---------G-G----------- 63 (444)
T ss_dssp SCSCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSC--HHHHHHHH---------T-T-----------
T ss_pred hhCcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECC--HHHhhhhc---------c-c-----------
Confidence 35569999999999999999988753 689999999872 21111000 0 0
Q ss_pred ECCEEEEEEecCCCCCCCccCCCccEEEecCCC-ccCHHHHHHHHhCCCcEEEecCC
Q 019445 74 FGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGV-FTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 74 i~g~~i~v~~~~~~~~~~w~~~~~DvV~~at~~-~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
..++. |++++ ..+.++|+|++|||. ..+.+.+.+++++|.. |+...+
T Consensus 64 -----~~~~~--d~~el-l~d~diDvVve~tp~~~~h~~~~~~AL~aGKh-Vvtenk 111 (444)
T 3mtj_A 64 -----LPLTT--NPFDV-VDDPEIDIVVELIGGLEPARELVMQAIANGKH-VVTANK 111 (444)
T ss_dssp -----CCEES--CTHHH-HTCTTCCEEEECCCSSTTHHHHHHHHHHTTCE-EEECCH
T ss_pred -----CcccC--CHHHH-hcCCCCCEEEEcCCCchHHHHHHHHHHHcCCE-EEECCc
Confidence 00111 22221 112478999999996 7888999999999974 444433
No 85
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=98.06 E-value=7.6e-06 Score=80.34 Aligned_cols=101 Identities=26% Similarity=0.316 Sum_probs=65.3
Q ss_pred CCceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCCh-hhhhhhcccccccCcccCceeeecCCcceEECCEEEEEE
Q 019445 4 DKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFIST-DYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (341)
Q Consensus 4 ~~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~-~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 82 (341)
|+++||||+|+|.+|+..++.+.++|.++|++|.|+..+. +..+..+ . .+| ++ ...++
T Consensus 18 ~~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~--~-~~g-~~-----------------~~~~~ 76 (444)
T 2ixa_A 18 PKKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEIL--K-KNG-KK-----------------PAKVF 76 (444)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHH--H-HTT-CC-----------------CCEEE
T ss_pred CCCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHH--H-hcC-CC-----------------CCcee
Confidence 4568999999999999999999999999999999873221 1111100 0 011 00 01112
Q ss_pred e--cCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEec
Q 019445 83 G--FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVIS 127 (341)
Q Consensus 83 ~--~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lS 127 (341)
. +.+.+++ ....++|+|+.|||.....+.+.+++++|. .|.+-
T Consensus 77 ~~~~~~~~~l-l~~~~vD~V~i~tp~~~h~~~~~~al~aGk-hV~~E 121 (444)
T 2ixa_A 77 GNGNDDYKNM-LKDKNIDAVFVSSPWEWHHEHGVAAMKAGK-IVGME 121 (444)
T ss_dssp CSSTTTHHHH-TTCTTCCEEEECCCGGGHHHHHHHHHHTTC-EEEEC
T ss_pred ccCCCCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-eEEEe
Confidence 1 0012221 112379999999999999999999999996 45443
No 86
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.05 E-value=4.7e-06 Score=65.42 Aligned_cols=99 Identities=15% Similarity=0.190 Sum_probs=62.1
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEec
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 84 (341)
+++||.|+|+|++|+.+++.|.+++..+++.+. + +.+....+. ..+ . ... ....
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~-r--~~~~~~~~~----~~~-~-----------~~~-------~~d~ 57 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVAD-H--DLAALAVLN----RMG-V-----------ATK-------QVDA 57 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEE-S--CHHHHHHHH----TTT-C-----------EEE-------ECCT
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEe-C--CHHHHHHHH----hCC-C-----------cEE-------EecC
Confidence 357999999999999999999988756766554 3 222211111 000 0 000 0000
Q ss_pred CCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 85 ~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
.+++.+.-...++|+||.|+|.......+....+.|++.++++.+
T Consensus 58 ~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 102 (118)
T 3ic5_A 58 KDEAGLAKALGGFDAVISAAPFFLTPIIAKAAKAAGAHYFDLTED 102 (118)
T ss_dssp TCHHHHHHHTTTCSEEEECSCGGGHHHHHHHHHHTTCEEECCCSC
T ss_pred CCHHHHHHHHcCCCEEEECCCchhhHHHHHHHHHhCCCEEEecCc
Confidence 011111000237899999999988888888889999999988764
No 87
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=98.04 E-value=1.6e-05 Score=75.18 Aligned_cols=85 Identities=20% Similarity=0.231 Sum_probs=60.6
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCC--------CcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECC
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRD--------DVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGE 76 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p--------~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g 76 (341)
+++||||+|+|.+|+.+++.+.+++ +++|++|.++..... . .+. . . .
T Consensus 2 k~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~-----------~-~~~-~------~-~----- 56 (332)
T 2ejw_A 2 EALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKP-----------R-AIP-Q------E-L----- 56 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSC-----------C-SSC-G------G-G-----
T ss_pred CeeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHh-----------h-ccC-c------c-c-----
Confidence 4689999999999999999999887 789999998621100 0 011 0 0 0
Q ss_pred EEEEEEecCCCCCCCccCCCccEEEecCCCc-cCHHHHHHHHhCCCcEE
Q 019445 77 KPVAVFGFRNPEEIPWAKTGAEYVVESTGVF-TDKDKAAAHLKGGAKKV 124 (341)
Q Consensus 77 ~~i~v~~~~~~~~~~w~~~~~DvV~~at~~~-~s~~~~~~~l~~G~k~V 124 (341)
.+. |++++ . ++|+|++|||.. ...+.+.+++++|..+|
T Consensus 57 ----~~~--d~~~l---l-~iDvVve~t~~~~~a~~~~~~AL~aGKhVV 95 (332)
T 2ejw_A 57 ----LRA--EPFDL---L-EADLVVEAMGGVEAPLRLVLPALEAGIPLI 95 (332)
T ss_dssp ----EES--SCCCC---T-TCSEEEECCCCSHHHHHHHHHHHHTTCCEE
T ss_pred ----ccC--CHHHH---h-CCCEEEECCCCcHHHHHHHHHHHHcCCeEE
Confidence 111 45554 2 789999999987 45678888999998544
No 88
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=98.03 E-value=6.9e-06 Score=76.25 Aligned_cols=90 Identities=18% Similarity=0.194 Sum_probs=63.0
Q ss_pred CCceeEEEEccCHHHHHHHHHHHc---CCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEE
Q 019445 4 DKKIKIGINGFGRIGRLVARVALQ---RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVA 80 (341)
Q Consensus 4 ~~~irV~I~G~G~iG~~llr~l~~---~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~ 80 (341)
+.|+||||+|+|.+|+..++.+.. ++.+++++|.+.... ...+ | +.
T Consensus 5 ~~~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~----------a~~~-------------------g--~~ 53 (294)
T 1lc0_A 5 SGKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRREL----------GSLD-------------------E--VR 53 (294)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCC----------CEET-------------------T--EE
T ss_pred CCcceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHH----------HHHc-------------------C--CC
Confidence 346899999999999999999887 678999999886210 0000 0 00
Q ss_pred EEecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 81 VFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 81 v~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
+ .+.+++ ....++|+|+.|||+....+.+.+++++|.. |.+--|
T Consensus 54 -~--~~~~el-l~~~~vD~V~i~tp~~~H~~~~~~al~aGkh-Vl~EKP 97 (294)
T 1lc0_A 54 -Q--ISLEDA-LRSQEIDVAYICSESSSHEDYIRQFLQAGKH-VLVEYP 97 (294)
T ss_dssp -B--CCHHHH-HHCSSEEEEEECSCGGGHHHHHHHHHHTTCE-EEEESC
T ss_pred -C--CCHHHH-hcCCCCCEEEEeCCcHhHHHHHHHHHHCCCc-EEEeCC
Confidence 0 022221 0123799999999999999999999999974 444433
No 89
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.97 E-value=5.7e-06 Score=77.31 Aligned_cols=93 Identities=17% Similarity=0.237 Sum_probs=64.5
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEec
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 84 (341)
+++||||+|+|.+|+.+++.|.++|+++++++.++ +.+... .+. . . +..+.
T Consensus 9 ~~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~--~~~~~~----------~~~-~--------~-------~~~~~- 59 (315)
T 3c1a_A 9 SPVRLALIGAGRWGKNYIRTIAGLPGAALVRLASS--NPDNLA----------LVP-P--------G-------CVIES- 59 (315)
T ss_dssp CCEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEES--CHHHHT----------TCC-T--------T-------CEEES-
T ss_pred CcceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeC--CHHHHH----------HHH-h--------h-------CcccC-
Confidence 46899999999999999999999989999999886 222111 011 0 0 11121
Q ss_pred CCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 85 ~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
+.+++ ....++|+|+.|||.....+.+.+++++|.. |++--|
T Consensus 60 -~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~-v~~eKP 101 (315)
T 3c1a_A 60 -DWRSV-VSAPEVEAVIIATPPATHAEITLAAIASGKA-VLVEKP 101 (315)
T ss_dssp -STHHH-HTCTTCCEEEEESCGGGHHHHHHHHHHTTCE-EEEESS
T ss_pred -CHHHH-hhCCCCCEEEEeCChHHHHHHHHHHHHCCCc-EEEcCC
Confidence 22222 0123789999999999999999999999963 444433
No 90
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=97.95 E-value=2.9e-05 Score=70.40 Aligned_cols=75 Identities=21% Similarity=0.259 Sum_probs=59.0
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEecC
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 85 (341)
+||+|+|+ |++|+.+++.+.++|+++|+++.+...+ +
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~d----------------l-------------------------- 38 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDP----------------L-------------------------- 38 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCC----------------T--------------------------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCC----------------H--------------------------
Confidence 48999999 9999999999998989999999875111 0
Q ss_pred CCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEec
Q 019445 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVIS 127 (341)
Q Consensus 86 ~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lS 127 (341)
+.+. ..++|+|+|+|+.....+.+..++++|+..|+-+
T Consensus 39 --~~~~--~~~~DvvIDfT~p~a~~~~~~~a~~~g~~~VigT 76 (245)
T 1p9l_A 39 --SLLT--DGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGT 76 (245)
T ss_dssp --HHHH--HTTCCEEEECSCTTTHHHHHHHHHHTTCEEEECC
T ss_pred --HHHh--ccCCcEEEEccChHHHHHHHHHHHHcCCCEEEcC
Confidence 0000 0257999999999999999999999999766644
No 91
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=97.94 E-value=1.6e-05 Score=75.22 Aligned_cols=94 Identities=22% Similarity=0.293 Sum_probs=57.8
Q ss_pred ceeEEEEccCHHHHHHHHHHHcC--------CCcEEEEeeCCCCCh-hh--hhhhcccccccCcccCceeeecCCcceEE
Q 019445 6 KIKIGINGFGRIGRLVARVALQR--------DDVELVAVNDPFIST-DY--MTYMFKYDSVHGQWKHNELKVKDEKTLLF 74 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~--------p~~elv~i~~~~~~~-~~--~a~ll~~ds~~g~~~~~~v~~~~~~~l~i 74 (341)
|+||||+|+|.+|+.+++.+.++ ++++|++|.++.... +. ....+......+.+
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~--------------- 66 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGML--------------- 66 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSC---------------
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccc---------------
Confidence 48999999999999999999988 899999999873211 00 00000000000000
Q ss_pred CCEEEEEEecCCCCCCCccCCCccEEEecCCCccC----HHHHHHHHhCCCc
Q 019445 75 GEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTD----KDKAAAHLKGGAK 122 (341)
Q Consensus 75 ~g~~i~v~~~~~~~~~~w~~~~~DvV~~at~~~~s----~~~~~~~l~~G~k 122 (341)
+...|.+++ ....++|+|++|||+... .+.+..++++|..
T Consensus 67 -------~~~~d~~~l-l~~~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkh 110 (327)
T 3do5_A 67 -------RDDAKAIEV-VRSADYDVLIEASVTRVDGGEGVNYIREALKRGKH 110 (327)
T ss_dssp -------SBCCCHHHH-HHHSCCSEEEECCCCC----CHHHHHHHHHTTTCE
T ss_pred -------cCCCCHHHH-hcCCCCCEEEECCCCcccchhHHHHHHHHHHCCCe
Confidence 000011111 012368999999998765 7888999999984
No 92
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=97.93 E-value=6.1e-06 Score=81.96 Aligned_cols=101 Identities=14% Similarity=0.157 Sum_probs=67.7
Q ss_pred CCCCceeEEEEcc----CHHHHHHHHHHHcC-CCcEEEEeeCCCCCh-hhhhhhcccccccCcccCceeeecCCcceEEC
Q 019445 2 AGDKKIKIGINGF----GRIGRLVARVALQR-DDVELVAVNDPFIST-DYMTYMFKYDSVHGQWKHNELKVKDEKTLLFG 75 (341)
Q Consensus 2 ~~~~~irV~I~G~----G~iG~~llr~l~~~-p~~elv~i~~~~~~~-~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~ 75 (341)
..|.++||||+|+ |.+|+..++.|.++ |.++|++|.|+..+. +.++. .+|- +
T Consensus 35 ~~m~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~------~~g~-~--------------- 92 (479)
T 2nvw_A 35 PSSRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIE------QLQL-K--------------- 92 (479)
T ss_dssp GGGCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHH------HTTC-T---------------
T ss_pred CCCCcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHH------HcCC-C---------------
Confidence 3455699999999 99999999999998 899999999873211 11111 1110 0
Q ss_pred CEEEEEEecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCC-----cEEEecCC
Q 019445 76 EKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGA-----KKVVISAP 129 (341)
Q Consensus 76 g~~i~v~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~-----k~V~lSa~ 129 (341)
+ ...+. +.+++ ....++|+|+.|||.....+.+.+++++|. |.|.+--|
T Consensus 93 ~--~~~~~--d~~el-l~~~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP 146 (479)
T 2nvw_A 93 H--ATGFD--SLESF-AQYKDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWA 146 (479)
T ss_dssp T--CEEES--CHHHH-HHCTTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESS
T ss_pred c--ceeeC--CHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEEeCC
Confidence 0 01111 22222 012378999999999999999999999993 55666544
No 93
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=97.88 E-value=1.1e-05 Score=72.24 Aligned_cols=135 Identities=20% Similarity=0.227 Sum_probs=79.3
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEecCC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRN 86 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 86 (341)
+||||+|+|.+|+.+++.|. +++++++++.++....+ . .+. +
T Consensus 1 m~vgiIG~G~mG~~~~~~l~-~~g~~lv~v~d~~~~~~--------------------------~---------~~~--~ 42 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLE-RNGFEIAAILDVRGEHE--------------------------K---------MVR--G 42 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEEECSSCCCT--------------------------T---------EES--S
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCCEEEEEEecCcchh--------------------------h---------hcC--C
Confidence 38999999999999999988 57799999988621000 0 000 1
Q ss_pred CCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCCCCCeeeeccCccccC-CCCcEEeCCCCccceecch
Q 019445 87 PEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYK-PELDIVSNASCTTNCLAPL 165 (341)
Q Consensus 87 ~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~d~~~~V~Gvn~~~~~-~~~~iIsnp~C~tt~Lapl 165 (341)
++++- ..++|+||+|||.....+.+..++++|..+++.+....+.+.+.-.+- +..+ .+..++-.+++... ...
T Consensus 43 ~~~l~--~~~~DvVv~~~~~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~-~~a~~~g~~~~i~~~~~g~--~~~ 117 (236)
T 2dc1_A 43 IDEFL--QREMDVAVEAASQQAVKDYAEKILKAGIDLIVLSTGAFADRDFLSRVR-EVCRKTGRRVYIASGAIGG--LDA 117 (236)
T ss_dssp HHHHT--TSCCSEEEECSCHHHHHHHHHHHHHTTCEEEESCGGGGGSHHHHHHHH-HHHHHHCCCEEECCTTCSC--HHH
T ss_pred HHHHh--cCCCCEEEECCCHHHHHHHHHHHHHCCCcEEEECcccCChHHHHHHHH-HHHHhcCCeEEecCccccC--hHH
Confidence 22210 037899999999999999999999999865554422111111000110 0011 12344445554433 233
Q ss_pred hHHHhhhcceeEEEEEEEeec
Q 019445 166 AKVIHDKFGIVEGLMTTVHSI 186 (341)
Q Consensus 166 lk~L~~~fgi~~~~ittv~a~ 186 (341)
++.... |+++..+++.+..
T Consensus 118 ~~~~~~--~~~~~~~~~~~~~ 136 (236)
T 2dc1_A 118 IFSASE--LIEEIVLTTRKNW 136 (236)
T ss_dssp HHHTGG--GEEEEEEEEEEEG
T ss_pred HHHhhc--cccEEEEEEEcCh
Confidence 444332 7777777776654
No 94
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.87 E-value=3.3e-05 Score=72.36 Aligned_cols=89 Identities=19% Similarity=0.178 Sum_probs=59.8
Q ss_pred ceeEEEEccCHHHH-HHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEec
Q 019445 6 KIKIGINGFGRIGR-LVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (341)
Q Consensus 6 ~irV~I~G~G~iG~-~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 84 (341)
|+||||+|+|.+|+ .+++.|.++|.++++ |.|+. .+....+ ...+|. + . .+..
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~~~~~l~-v~d~~--~~~~~~~---a~~~g~-~----------~---------~~~~ 55 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQWPDIELV-LCTRN--PKVLGTL---ATRYRV-S----------A---------TCTD 55 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTSTTEEEE-EECSC--HHHHHHH---HHHTTC-C----------C---------CCSS
T ss_pred CcEEEEECCCHHHHHHHHHHHHhCCCceEE-EEeCC--HHHHHHH---HHHcCC-C----------c---------cccC
Confidence 58999999999998 499999988899999 98862 2211111 011110 0 0 0000
Q ss_pred CCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEE
Q 019445 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKV 124 (341)
Q Consensus 85 ~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V 124 (341)
..+.+ ..++|+|+.|||.....+.+.+++++|..++
T Consensus 56 -~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~Gk~V~ 91 (323)
T 1xea_A 56 -YRDVL---QYGVDAVMIHAATDVHSTLAAFFLHLGIPTF 91 (323)
T ss_dssp -TTGGG---GGCCSEEEECSCGGGHHHHHHHHHHTTCCEE
T ss_pred -HHHHh---hcCCCEEEEECCchhHHHHHHHHHHCCCeEE
Confidence 11222 2479999999999999999999999997533
No 95
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.87 E-value=2.1e-05 Score=74.01 Aligned_cols=95 Identities=14% Similarity=0.136 Sum_probs=60.6
Q ss_pred CCceeEEEEccCHHHH-HHHHHHHcCCCcEEEEeeCCCCCh-hhhhhhcccccccCcccCceeeecCCcceEECCEEEEE
Q 019445 4 DKKIKIGINGFGRIGR-LVARVALQRDDVELVAVNDPFIST-DYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAV 81 (341)
Q Consensus 4 ~~~irV~I~G~G~iG~-~llr~l~~~p~~elv~i~~~~~~~-~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v 81 (341)
|+++||||+|+|.+|. .+++.|. ++.++|++|.|+..+. +.++. .+|.- ..
T Consensus 2 M~~~rvgiiG~G~~~~~~~~~~l~-~~~~~lvav~d~~~~~~~~~a~------~~~~~--------------------~~ 54 (336)
T 2p2s_A 2 MKKIRFAAIGLAHNHIYDMCQQLI-DAGAELAGVFESDSDNRAKFTS------LFPSV--------------------PF 54 (336)
T ss_dssp --CCEEEEECCSSTHHHHHHHHHH-HTTCEEEEEECSCTTSCHHHHH------HSTTC--------------------CB
T ss_pred CCccEEEEECCChHHHHHhhhhhc-CCCcEEEEEeCCCHHHHHHHHH------hcCCC--------------------cc
Confidence 4568999999999996 5777774 5789999999973322 22111 11100 00
Q ss_pred EecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 82 FGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 82 ~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
+. +.+++ ....++|+|+.|||.....+.+.+++++|.. |.+--|
T Consensus 55 ~~--~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGkh-Vl~EKP 98 (336)
T 2p2s_A 55 AA--SAEQL-ITDASIDLIACAVIPCDRAELALRTLDAGKD-FFTAKP 98 (336)
T ss_dssp CS--CHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTTCE-EEECSS
T ss_pred cC--CHHHH-hhCCCCCEEEEeCChhhHHHHHHHHHHCCCc-EEEeCC
Confidence 10 11111 0123789999999999999999999999964 444433
No 96
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=97.86 E-value=1.4e-05 Score=75.54 Aligned_cols=100 Identities=19% Similarity=0.167 Sum_probs=59.2
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCC-------CcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCE
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRD-------DVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEK 77 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p-------~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~ 77 (341)
+++||||+|+|.+|+.+++.|.+++ +++|++|.++...... .. ++. ..|. .. ...+ .+.
T Consensus 5 ~~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~--~~--~~~--~~~~-~~--~~~~-~~~---- 70 (331)
T 3c8m_A 5 KTINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYN--ER--IDI--GKVI-SY--KEKG-SLD---- 70 (331)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEEC--TT--CCH--HHHH-HH--HHTT-CGG----
T ss_pred cEEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhh--cc--cCh--HHHh-hh--hccC-Ccc----
Confidence 4599999999999999999998876 6999999987321100 00 000 0000 00 0000 000
Q ss_pred EEEEEe-cCCCCCCCccCCCccEEEecCCCc----cCHHHHHHHHhCCCc
Q 019445 78 PVAVFG-FRNPEEIPWAKTGAEYVVESTGVF----TDKDKAAAHLKGGAK 122 (341)
Q Consensus 78 ~i~v~~-~~~~~~~~w~~~~~DvV~~at~~~----~s~~~~~~~l~~G~k 122 (341)
.++. ..+++++- +.++|+|++|||+. ...+.+.+++++|..
T Consensus 71 --~~~~~~~d~~~ll--~~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGkh 116 (331)
T 3c8m_A 71 --SLEYESISASEAL--ARDFDIVVDATPASADGKKELAFYKETFENGKD 116 (331)
T ss_dssp --GCCSEECCHHHHH--HSSCSEEEECSCCCSSSHHHHHHHHHHHHTTCE
T ss_pred --cccCCCCCHHHHh--CCCCCEEEECCCCCCccchHHHHHHHHHHCCCe
Confidence 0000 00222221 13789999999996 567789999999974
No 97
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=97.84 E-value=5.3e-06 Score=81.39 Aligned_cols=97 Identities=16% Similarity=0.160 Sum_probs=65.7
Q ss_pred ceeEEEEcc----CHHHHHHHHHHHcC-CCcEEEEeeCCCCCh-hhhhhhcccccccCcccCceeeecCCcceEECCEEE
Q 019445 6 KIKIGINGF----GRIGRLVARVALQR-DDVELVAVNDPFIST-DYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPV 79 (341)
Q Consensus 6 ~irV~I~G~----G~iG~~llr~l~~~-p~~elv~i~~~~~~~-~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i 79 (341)
++||||+|+ |++|+..++.|.++ |.++|++|.|+..+. +.++ ..+|.- + +
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a------~~~g~~----------------~--~ 75 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATI------QRLKLS----------------N--A 75 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHH------HHTTCT----------------T--C
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHH------HHcCCC----------------c--c
Confidence 489999999 99999999999999 899999999873221 1111 111100 0 0
Q ss_pred EEEecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCC-----cEEEecCC
Q 019445 80 AVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGA-----KKVVISAP 129 (341)
Q Consensus 80 ~v~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~-----k~V~lSa~ 129 (341)
..+. +.+++- ...++|+|+.|||.....+.+.+++++|. |.|.+--|
T Consensus 76 ~~~~--~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP 127 (438)
T 3btv_A 76 TAFP--TLESFA-SSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWA 127 (438)
T ss_dssp EEES--SHHHHH-HCSSCSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEESS
T ss_pred eeeC--CHHHHh-cCCCCCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEecCc
Confidence 1121 222221 12378999999999999999999999993 55665544
No 98
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=97.84 E-value=8.6e-06 Score=77.77 Aligned_cols=95 Identities=14% Similarity=0.177 Sum_probs=60.5
Q ss_pred CceeEEEEccCHHHH-HHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEe
Q 019445 5 KKIKIGINGFGRIGR-LVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG 83 (341)
Q Consensus 5 ~~irV~I~G~G~iG~-~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 83 (341)
.++||||+|+|.+|. .+++.+. +|+++|++|.|+. .+....+ ...+|.. ..+.
T Consensus 25 ~~irvgiiG~G~~~~~~~~~~~~-~~~~~lvav~d~~--~~~a~~~---a~~~~~~--------------------~~~~ 78 (361)
T 3u3x_A 25 DELRFAAVGLNHNHIYGQVNCLL-RAGARLAGFHEKD--DALAAEF---SAVYADA--------------------RRIA 78 (361)
T ss_dssp -CCEEEEECCCSTTHHHHHHHHH-HTTCEEEEEECSC--HHHHHHH---HHHSSSC--------------------CEES
T ss_pred cCcEEEEECcCHHHHHHHHHHhh-cCCcEEEEEEcCC--HHHHHHH---HHHcCCC--------------------cccC
Confidence 468999999999996 4566655 5889999999973 2211110 1111100 0111
Q ss_pred cCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 84 ~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
+.+++ ....++|+|+.|||.....+.+.+++++|. .|.+--|
T Consensus 79 --~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKP 120 (361)
T 3u3x_A 79 --TAEEI-LEDENIGLIVSAAVSSERAELAIRAMQHGK-DVLVDKP 120 (361)
T ss_dssp --CHHHH-HTCTTCCEEEECCCHHHHHHHHHHHHHTTC-EEEEESC
T ss_pred --CHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCCC-eEEEeCC
Confidence 22221 112368999999999999999999999996 4555444
No 99
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.84 E-value=2e-05 Score=76.79 Aligned_cols=96 Identities=27% Similarity=0.292 Sum_probs=63.4
Q ss_pred CCceeEEEEccCH---HHHHHHHHHHcCCCcEEEE-eeCCCCCh-hhhhhhcccc--cccCcccCceeeecCCcceEECC
Q 019445 4 DKKIKIGINGFGR---IGRLVARVALQRDDVELVA-VNDPFIST-DYMTYMFKYD--SVHGQWKHNELKVKDEKTLLFGE 76 (341)
Q Consensus 4 ~~~irV~I~G~G~---iG~~llr~l~~~p~~elv~-i~~~~~~~-~~~a~ll~~d--s~~g~~~~~~v~~~~~~~l~i~g 76 (341)
|.++||||+|+|. +|+..++.+...++++|++ |.|+..+. +..+..+... ..|.
T Consensus 35 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~------------------- 95 (417)
T 3v5n_A 35 QKRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYS------------------- 95 (417)
T ss_dssp CCCEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCS-------------------
T ss_pred CCcceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccC-------------------
Confidence 4568999999998 9999999998888899997 88762221 2222111111 1111
Q ss_pred EEEEEEecCCCCCCCccC-----CCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 77 KPVAVFGFRNPEEIPWAK-----TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 77 ~~i~v~~~~~~~~~~w~~-----~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
+.+++ ... .++|+|+.|||.....+.+.+++++|.. |.+--|
T Consensus 96 ---------~~~~l-l~~~~~~~~~vD~V~I~tp~~~H~~~~~~al~aGkh-Vl~EKP 142 (417)
T 3v5n_A 96 ---------DFKEM-AIREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRGIH-VICDKP 142 (417)
T ss_dssp ---------CHHHH-HHHHHHCTTCCSEEEECSCTTSHHHHHHHHHTTTCE-EEEESS
T ss_pred ---------CHHHH-HhcccccCCCCcEEEECCCcHHHHHHHHHHHhCCCe-EEEECC
Confidence 11111 001 2689999999999999999999999964 555444
No 100
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.81 E-value=3.1e-05 Score=72.42 Aligned_cols=94 Identities=20% Similarity=0.280 Sum_probs=63.5
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEec
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 84 (341)
|+||||+|+ |++|+..++.+.+. ++++++|.|+..+... ....++. ...+.
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~~~------~~~~~~~--------------------~~~~~- 54 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEV-GGVLVASLDPATNVGL------VDSFFPE--------------------AEFFT- 54 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHT-TCEEEEEECSSCCCGG------GGGTCTT--------------------CEEES-
T ss_pred ceEEEEECCChHHHHHHHHHHHhC-CCEEEEEEcCCHHHHH------HHhhCCC--------------------CceeC-
Confidence 589999999 89999999999887 4899999997332211 1111110 11111
Q ss_pred CCCCCCC-----c--cCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 85 RNPEEIP-----W--AKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 85 ~~~~~~~-----w--~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
+.+++. | ...++|+|+.|||.....+.+.+++++|. .|.+--|
T Consensus 55 -~~~~ll~~~~~l~~~~~~vD~V~I~tP~~~H~~~~~~al~aGk-hVl~EKP 104 (312)
T 3o9z_A 55 -EPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLGA-NALSEKP 104 (312)
T ss_dssp -CHHHHHHHHHHHHHTTCCCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred -CHHHHHHHhhhhcccCCCCcEEEECCCchhhHHHHHHHHHCCC-eEEEECC
Confidence 111110 0 13479999999999999999999999996 4555433
No 101
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=97.80 E-value=2.8e-05 Score=76.23 Aligned_cols=109 Identities=17% Similarity=0.282 Sum_probs=64.6
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccC-cccCceeeecCC-cceE---ECCEEE
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHG-QWKHNELKVKDE-KTLL---FGEKPV 79 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g-~~~~~~v~~~~~-~~l~---i~g~~i 79 (341)
.++||||+|+|++|+.+++.+.+.|+++|++|.|...+. .....+ ..|| .+. +...+. ..+. -.+ ..
T Consensus 22 k~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~er--a~~~a~--~~yG~~~~---~~~~~~~~~i~~a~~~g-~~ 93 (446)
T 3upl_A 22 KPIRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPN--TFKAIR--TAYGDEEN---AREATTESAMTRAIEAG-KI 93 (446)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHH--HHHHHH--HHHSSSTT---EEECSSHHHHHHHHHTT-CE
T ss_pred CceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHH--HHHHHH--HhcCCccc---cccccchhhhhhhhccC-Cc
Confidence 469999999999999999999999999999999973322 111110 0012 011 000000 0000 000 01
Q ss_pred EEEecCCCCCCCccCCCccEEEecCCCc-cCHHHHHHHHhCCCcEE
Q 019445 80 AVFGFRNPEEIPWAKTGAEYVVESTGVF-TDKDKAAAHLKGGAKKV 124 (341)
Q Consensus 80 ~v~~~~~~~~~~w~~~~~DvV~~at~~~-~s~~~~~~~l~~G~k~V 124 (341)
.++. |.+++ ....++|+|++|||.. ...+.+.+++++|..++
T Consensus 94 ~v~~--D~eeL-L~d~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv 136 (446)
T 3upl_A 94 AVTD--DNDLI-LSNPLIDVIIDATGIPEVGAETGIAAIRNGKHLV 136 (446)
T ss_dssp EEES--CHHHH-HTCTTCCEEEECSCCHHHHHHHHHHHHHTTCEEE
T ss_pred eEEC--CHHHH-hcCCCCCEEEEcCCChHHHHHHHHHHHHcCCcEE
Confidence 2222 33322 1134799999999874 56789999999998544
No 102
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.79 E-value=1.6e-05 Score=76.53 Aligned_cols=94 Identities=22% Similarity=0.327 Sum_probs=64.4
Q ss_pred ceeEEEEccC-HHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEec
Q 019445 6 KIKIGINGFG-RIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (341)
Q Consensus 6 ~irV~I~G~G-~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 84 (341)
++||||+|+| .+|+..++.|.++|+++|++|.|+. .+....+ ...+| +..+.
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~--~~~~~~~---a~~~g---------------------~~~~~- 54 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPN--EDVRERF---GKEYG---------------------IPVFA- 54 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSC--HHHHHHH---HHHHT---------------------CCEES-
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCC--HHHHHHH---HHHcC---------------------CCeEC-
Confidence 5899999999 9999999999999999999999872 2211110 01110 01111
Q ss_pred CCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 85 ~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
+.+++ ....++|+|+.|||.....+.+.+++++|. .|.+--|
T Consensus 55 -~~~el-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-~Vl~EKP 96 (387)
T 3moi_A 55 -TLAEM-MQHVQMDAVYIASPHQFHCEHVVQASEQGL-HIIVEKP 96 (387)
T ss_dssp -SHHHH-HHHSCCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred -CHHHH-HcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-ceeeeCC
Confidence 22222 112368999999999999999999999995 4555444
No 103
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=97.77 E-value=2.2e-05 Score=75.90 Aligned_cols=99 Identities=22% Similarity=0.189 Sum_probs=63.7
Q ss_pred CCceeEEEEccCH---HHHHHHHHHHcCCCcEEEE-eeCCCCCh-hhhhhhcccc--cccCcccCceeeecCCcceEECC
Q 019445 4 DKKIKIGINGFGR---IGRLVARVALQRDDVELVA-VNDPFIST-DYMTYMFKYD--SVHGQWKHNELKVKDEKTLLFGE 76 (341)
Q Consensus 4 ~~~irV~I~G~G~---iG~~llr~l~~~p~~elv~-i~~~~~~~-~~~a~ll~~d--s~~g~~~~~~v~~~~~~~l~i~g 76 (341)
|.++||||+|+|. +|+..++.+...++++|++ |.|+..+. +..+..+... ..|..+. .+
T Consensus 10 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~----------~l---- 75 (398)
T 3dty_A 10 PQPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYL----------SM---- 75 (398)
T ss_dssp CSCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHH----------HH----
T ss_pred cCcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHH----------HH----
Confidence 4569999999999 9999999999888899998 77762221 2222111111 1111111 00
Q ss_pred EEEEEEecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEec
Q 019445 77 KPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVIS 127 (341)
Q Consensus 77 ~~i~v~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lS 127 (341)
.. +.... ..++|+|+.|||.....+.+.+++++|. .|.+-
T Consensus 76 -----l~--~~~~~---~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~E 115 (398)
T 3dty_A 76 -----FE--QEARR---ADGIQAVSIATPNGTHYSITKAALEAGL-HVVCE 115 (398)
T ss_dssp -----HH--HHTTC---TTCCSEEEEESCGGGHHHHHHHHHHTTC-EEEEC
T ss_pred -----Hh--ccccc---CCCCCEEEECCCcHHHHHHHHHHHHCCC-eEEEe
Confidence 00 00000 1268999999999999999999999996 35443
No 104
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.75 E-value=4.7e-05 Score=71.41 Aligned_cols=94 Identities=23% Similarity=0.200 Sum_probs=63.7
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEec
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 84 (341)
|+||||+|+ |++|+..++.+.+. .++++++.|+..+... .+..++. ...+.
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~~~------~~~~~~~--------------------~~~~~- 54 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDT-GNCLVSAYDINDSVGI------IDSISPQ--------------------SEFFT- 54 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHT-TCEEEEEECSSCCCGG------GGGTCTT--------------------CEEES-
T ss_pred ceEEEEECCCcHHHHHHHHHHHhC-CCEEEEEEcCCHHHHH------HHhhCCC--------------------CcEEC-
Confidence 589999999 89999999999887 5899999987332211 1111110 11111
Q ss_pred CCCCCCC-----c---cCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 85 RNPEEIP-----W---AKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 85 ~~~~~~~-----w---~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
+.+++. | ...++|+|+.|||.....+.+.+++++|. .|.+--|
T Consensus 55 -~~~~ll~~~~~l~~~~~~~vD~V~I~tP~~~H~~~~~~al~aGk-hVl~EKP 105 (318)
T 3oa2_A 55 -EFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLGC-DVICEKP 105 (318)
T ss_dssp -SHHHHHHHHHHHTTSTTTSCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred -CHHHHHHhhhhhhhccCCCCcEEEECCCcHHHHHHHHHHHHCCC-eEEEECC
Confidence 111110 0 13479999999999999999999999996 4555444
No 105
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=97.68 E-value=1.8e-05 Score=74.60 Aligned_cols=96 Identities=13% Similarity=0.079 Sum_probs=62.2
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCC--hhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEe
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFIS--TDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG 83 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~--~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 83 (341)
|+||||+|+|.+|+..++.+ +|+++|++|.|+... .+..+... ..+| ++ ...+.
T Consensus 2 ~~rvgiiG~G~~~~~~~~~l--~~~~~lvav~d~~~~~~~~~~~~~~---~~~~----------------~~---~~~~~ 57 (337)
T 3ip3_A 2 SLKICVIGSSGHFRYALEGL--DEECSITGIAPGVPEEDLSKLEKAI---SEMN----------------IK---PKKYN 57 (337)
T ss_dssp CEEEEEECSSSCHHHHHTTC--CTTEEEEEEECSSTTCCCHHHHHHH---HTTT----------------CC---CEECS
T ss_pred ceEEEEEccchhHHHHHHhc--CCCcEEEEEecCCchhhHHHHHHHH---HHcC----------------CC---CcccC
Confidence 58999999988888888887 889999999987321 12221111 0011 00 01121
Q ss_pred cCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 84 ~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
+.+++ ....++|+|+.|||.....+.+.+++++|.. |.+--|
T Consensus 58 --~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aGkh-Vl~EKP 99 (337)
T 3ip3_A 58 --NWWEM-LEKEKPDILVINTVFSLNGKILLEALERKIH-AFVEKP 99 (337)
T ss_dssp --SHHHH-HHHHCCSEEEECSSHHHHHHHHHHHHHTTCE-EEECSS
T ss_pred --CHHHH-hcCCCCCEEEEeCCcchHHHHHHHHHHCCCc-EEEeCC
Confidence 22222 1123689999999999999999999999964 554433
No 106
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.61 E-value=1.3e-05 Score=76.53 Aligned_cols=95 Identities=22% Similarity=0.199 Sum_probs=60.9
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEecC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 85 (341)
+|||.|+|+|++|+.+++.|.++.++.++.++. +.+..+ .. +. . .+.+ ...
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~~~~v~~~~~~~-----~~~~~~------~~-~~-~--------~~~~--------d~~ 66 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKDEFDVYIGDVNN-----ENLEKV------KE-FA-T--------PLKV--------DAS 66 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTTSEEEEEESCH-----HHHHHH------TT-TS-E--------EEEC--------CTT
T ss_pred ccEEEEECCCHHHHHHHHHHhcCCCeEEEEcCH-----HHHHHH------hc-cC-C--------cEEE--------ecC
Confidence 479999999999999999998877665444332 111111 00 00 0 1111 001
Q ss_pred CCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 86 ~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
|++.+.=-..++|+|+.|+|.+.....++.++++|+..||+|-.
T Consensus 67 d~~~l~~~~~~~DvVi~~~p~~~~~~v~~~~~~~g~~yvD~s~~ 110 (365)
T 3abi_A 67 NFDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKVDMVDVSFM 110 (365)
T ss_dssp CHHHHHHHHTTCSEEEECCCGGGHHHHHHHHHHHTCEEEECCCC
T ss_pred CHHHHHHHHhCCCEEEEecCCcccchHHHHHHhcCcceEeeecc
Confidence 11111000247899999999999889999999999999998754
No 107
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.57 E-value=8.9e-05 Score=69.40 Aligned_cols=91 Identities=18% Similarity=0.152 Sum_probs=59.5
Q ss_pred eeEEEEccCHHHHHH-HHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEecC
Q 019445 7 IKIGINGFGRIGRLV-ARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (341)
Q Consensus 7 irV~I~G~G~iG~~l-lr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 85 (341)
+||||+|+|.+|+.+ ++.|.+ +.+++++|.|+. .+....+ ...+|... .+.
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~-~~~~~vav~d~~--~~~~~~~---~~~~g~~~--------------------~~~-- 52 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRA-TGGEVVSMMSTS--AERGAAY---ATENGIGK--------------------SVT-- 52 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHH-TTCEEEEEECSC--HHHHHHH---HHHTTCSC--------------------CBS--
T ss_pred CeEEEEcccHHHHHhhhHHhhc-CCCeEEEEECCC--HHHHHHH---HHHcCCCc--------------------ccC--
Confidence 489999999999998 888888 889999999872 2211111 01111000 000
Q ss_pred CCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEec
Q 019445 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVIS 127 (341)
Q Consensus 86 ~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lS 127 (341)
+.+++ ....++|+|+.|||.....+.+..++++|.. |++-
T Consensus 53 ~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~-v~~e 92 (332)
T 2glx_A 53 SVEEL-VGDPDVDAVYVSTTNELHREQTLAAIRAGKH-VLCE 92 (332)
T ss_dssp CHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTTCE-EEEC
T ss_pred CHHHH-hcCCCCCEEEEeCChhHhHHHHHHHHHCCCe-EEEe
Confidence 11111 0113689999999999999999999999964 4443
No 108
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=97.48 E-value=0.00024 Score=68.19 Aligned_cols=91 Identities=19% Similarity=0.243 Sum_probs=60.7
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCC-CcEEEEeeCCCCCh-hhhhhhcccccccCcccCceeeecCCcceEECCEEEEEE
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRD-DVELVAVNDPFIST-DYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p-~~elv~i~~~~~~~-~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 82 (341)
.++||||+|+| .|+..++.+.+.| .+||++|.|+..+. +.++. .|| ++.+
T Consensus 6 ~~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~------~~g---------------------v~~~ 57 (372)
T 4gmf_A 6 PKQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAH------AFG---------------------IPLY 57 (372)
T ss_dssp -CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHH------HTT---------------------CCEE
T ss_pred CCCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHH------HhC---------------------CCEE
Confidence 36999999999 5999999998876 59999999973322 22221 111 1122
Q ss_pred ecCCCCCCCccCCCccEEEecCCCccC----HHHHHHHHhCCCcEEEecCC
Q 019445 83 GFRNPEEIPWAKTGAEYVVESTGVFTD----KDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 83 ~~~~~~~~~w~~~~~DvV~~at~~~~s----~~~~~~~l~~G~k~V~lSa~ 129 (341)
. +.+++ ..++|+|+-|||.... .+.+.+++++|.. |.+--|
T Consensus 58 ~--~~~~l---~~~~D~v~i~~p~~~h~~~~~~~a~~al~aGkh-Vl~EKP 102 (372)
T 4gmf_A 58 T--SPEQI---TGMPDIACIVVRSTVAGGAGTQLARHFLARGVH-VIQEHP 102 (372)
T ss_dssp S--SGGGC---CSCCSEEEECCC--CTTSHHHHHHHHHHHTTCE-EEEESC
T ss_pred C--CHHHH---hcCCCEEEEECCCcccchhHHHHHHHHHHcCCc-EEEecC
Confidence 2 34444 2378999999998877 7889999999974 444333
No 109
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=97.43 E-value=9.3e-05 Score=70.83 Aligned_cols=92 Identities=11% Similarity=0.098 Sum_probs=59.0
Q ss_pred CceeEEEEc-cCHHHHH-HH----HHHHcCCCcEEE---------EeeCCCCCh-hhhhhhcccccccCcccCceeeecC
Q 019445 5 KKIKIGING-FGRIGRL-VA----RVALQRDDVELV---------AVNDPFIST-DYMTYMFKYDSVHGQWKHNELKVKD 68 (341)
Q Consensus 5 ~~irV~I~G-~G~iG~~-ll----r~l~~~p~~elv---------~i~~~~~~~-~~~a~ll~~ds~~g~~~~~~v~~~~ 68 (341)
.++||||+| +|++|+. .+ +.+.+.+.++++ +|.++..+. +.++. .+|.-
T Consensus 5 ~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~------~~~~~--------- 69 (383)
T 3oqb_A 5 QRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAK------RFNIA--------- 69 (383)
T ss_dssp EEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHH------HTTCC---------
T ss_pred ceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHH------HhCCC---------
Confidence 468999999 6999997 77 888777766544 677762221 11111 11100
Q ss_pred CcceEECCEEEEEEecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEe
Q 019445 69 EKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVI 126 (341)
Q Consensus 69 ~~~l~i~g~~i~v~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~l 126 (341)
.++. +.+++ ....++|+|+.|||.....+.+.+++++|.. |.+
T Consensus 70 -----------~~~~--~~~~l-l~~~~iD~V~i~tp~~~h~~~~~~al~~Gk~-V~~ 112 (383)
T 3oqb_A 70 -----------RWTT--DLDAA-LADKNDTMFFDAATTQARPGLLTQAINAGKH-VYC 112 (383)
T ss_dssp -----------CEES--CHHHH-HHCSSCCEEEECSCSSSSHHHHHHHHTTTCE-EEE
T ss_pred -----------cccC--CHHHH-hcCCCCCEEEECCCchHHHHHHHHHHHCCCe-EEE
Confidence 0111 22221 0123689999999999999999999999964 444
No 110
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=97.42 E-value=0.00017 Score=63.85 Aligned_cols=94 Identities=18% Similarity=0.157 Sum_probs=63.3
Q ss_pred ceeEEEEccCHHHHHHHHHH-HcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEec
Q 019445 6 KIKIGINGFGRIGRLVARVA-LQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l-~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 84 (341)
..||+|+|+|.+|+.+++.+ .++ .++++++.|. +++. .|+ .++|..+ ...
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~--dp~k----------~g~--------------~i~gv~V--~~~ 130 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDV--DPEK----------VGR--------------PVRGGVI--EHV 130 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEES--CTTT----------TTC--------------EETTEEE--EEG
T ss_pred CCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeC--CHHH----------Hhh--------------hhcCCee--ecH
Confidence 47999999999999999963 334 7999999885 2110 111 1223222 221
Q ss_pred CCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCC
Q 019445 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (341)
Q Consensus 85 ~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~ 130 (341)
.+.+++- .. ++|.|+.|+|+....+.+..++++|++.+.--.|.
T Consensus 131 ~dl~ell-~~-~ID~ViIA~Ps~~~~ei~~~l~~aGi~~Ilnf~P~ 174 (211)
T 2dt5_A 131 DLLPQRV-PG-RIEIALLTVPREAAQKAADLLVAAGIKGILNFAPV 174 (211)
T ss_dssp GGHHHHS-TT-TCCEEEECSCHHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred HhHHHHH-Hc-CCCEEEEeCCchhHHHHHHHHHHcCCCEEEECCcc
Confidence 1232221 23 79999999999988889999999999877655554
No 111
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=97.41 E-value=0.00021 Score=64.87 Aligned_cols=80 Identities=24% Similarity=0.309 Sum_probs=59.2
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEecC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 85 (341)
.+||+|+|+|.||+.++|. + ++|++++.+. .. + .+ | +....
T Consensus 12 ~~rV~i~G~GaIG~~v~~~---~-~leLv~v~~~-k~-------------------g--------el---g--v~a~~-- 52 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKKLVEL---G-NFEKIYAYDR-IS-------------------K--------DI---P--GVVRL-- 52 (253)
T ss_dssp CCEEEEECCSHHHHHHHHH---S-CCSEEEEECS-SC-------------------C--------CC---S--SSEEC--
T ss_pred cceEEEECcCHHHHHHHhc---C-CcEEEEEEec-cc-------------------c--------cc---C--ceeeC--
Confidence 3799999999999999998 5 7999998761 00 1 11 1 11111
Q ss_pred CCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEec
Q 019445 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVIS 127 (341)
Q Consensus 86 ~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lS 127 (341)
|.+++. .++|+|++|.++..-.+++.++|++|+.+|..|
T Consensus 53 d~d~ll---a~pD~VVe~A~~~av~e~~~~iL~aG~dvv~~S 91 (253)
T 1j5p_A 53 DEFQVP---SDVSTVVECASPEAVKEYSLQILKNPVNYIIIS 91 (253)
T ss_dssp SSCCCC---TTCCEEEECSCHHHHHHHHHHHTTSSSEEEECC
T ss_pred CHHHHh---hCCCEEEECCCHHHHHHHHHHHHHCCCCEEEcC
Confidence 455553 378999999999877788999999999877766
No 112
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=97.34 E-value=0.00099 Score=59.32 Aligned_cols=71 Identities=23% Similarity=0.238 Sum_probs=55.3
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEecC
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 85 (341)
+|-+|+|+ |++|+.+.+++ +.+++||++.-+.. . . .
T Consensus 13 ~~~~v~Ga~GrMG~~i~~~~-~~~~~elv~~id~~---------------------~--------~-----------~-- 49 (228)
T 1vm6_A 13 MKYGIVGYSGRMGQEIQKVF-SEKGHELVLKVDVN---------------------G--------V-----------E-- 49 (228)
T ss_dssp CEEEEETTTSHHHHHHHHHH-HHTTCEEEEEEETT---------------------E--------E-----------E--
T ss_pred ceeEEEEecCHHHHHHHHHH-hCCCCEEEEEEcCC---------------------C--------c-----------c--
Confidence 68999999 99999998875 56679998886540 0 0 0
Q ss_pred CCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEec
Q 019445 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVIS 127 (341)
Q Consensus 86 ~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lS 127 (341)
+. .++||++|.|-.....+.++.+++.|.+.|+-|
T Consensus 50 ~l-------~~~DVvIDFT~P~a~~~~~~~~~~~g~~~ViGT 84 (228)
T 1vm6_A 50 EL-------DSPDVVIDFSSPEALPKTVDLCKKYRAGLVLGT 84 (228)
T ss_dssp EC-------SCCSEEEECSCGGGHHHHHHHHHHHTCEEEECC
T ss_pred cc-------cCCCEEEECCCHHHHHHHHHHHHHcCCCEEEeC
Confidence 11 157999999988899999999999999877655
No 113
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.32 E-value=0.00029 Score=62.50 Aligned_cols=95 Identities=14% Similarity=0.218 Sum_probs=59.3
Q ss_pred ceeEEEEccCHHHHHHHHH-HHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEec
Q 019445 6 KIKIGINGFGRIGRLVARV-ALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~-l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 84 (341)
..||+|+|+|.+|+.+++. ...++.++++++.|. +++. .|+ .++|.++ ...
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~--dp~k----------~g~--------------~i~gv~V--~~~ 136 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDI--NESK----------IGT--------------EVGGVPV--YNL 136 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEES--CTTT----------TTC--------------EETTEEE--EEG
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeC--CHHH----------HHh--------------HhcCCee--ech
Confidence 4689999999999999994 445667999999885 2210 111 1223222 221
Q ss_pred CCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCC
Q 019445 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK 131 (341)
Q Consensus 85 ~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~ 131 (341)
.+.+++- ... |+|+.|+|.....+.+..++++|++.+.--+|..
T Consensus 137 ~dl~eli--~~~-D~ViIAvPs~~~~ei~~~l~~aGi~~Ilnf~P~~ 180 (215)
T 2vt3_A 137 DDLEQHV--KDE-SVAILTVPAVAAQSITDRLVALGIKGILNFTPAR 180 (215)
T ss_dssp GGHHHHC--SSC-CEEEECSCHHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred hhHHHHH--HhC-CEEEEecCchhHHHHHHHHHHcCCCEEEEcCcee
Confidence 1222221 123 9999999998888999999999998777666643
No 114
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=97.32 E-value=8.9e-05 Score=71.94 Aligned_cols=146 Identities=14% Similarity=0.124 Sum_probs=79.5
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCc-EEEEeeCCCCCh-hhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEec
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDV-ELVAVNDPFIST-DYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~-elv~i~~~~~~~-~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 84 (341)
+||+|+|+|++|+.+++.|.+++++ ..+.+.++..+. +.++..+. ...+ . .+.. + ...-
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~--~~~~-----------~-~~~~----~-~~D~ 62 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIK--AKGY-----------G-EIDI----T-TVDA 62 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHH--HTTC-----------C-CCEE----E-ECCT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhh--hhcC-----------C-ceEE----E-EecC
Confidence 5899999999999999999999875 344555552211 22211110 0000 0 0000 0 0000
Q ss_pred CCCCCCC--ccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCCC-CCCeeeeccC---ccccC-CCCcEEeCCCC
Q 019445 85 RNPEEIP--WAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSK-DAPMFVVGVN---EKEYK-PELDIVSNASC 157 (341)
Q Consensus 85 ~~~~~~~--w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~~-d~~~~V~Gvn---~~~~~-~~~~iIsnp~C 157 (341)
.+++.+. ....++|+||.|+|.+.....+...+++|+..+|++.... +...+.|... .+..+ .+..++.++||
T Consensus 63 ~d~~~l~~~l~~~~~DvVin~ag~~~~~~v~~a~l~~g~~vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g~G~ 142 (405)
T 4ina_A 63 DSIEELVALINEVKPQIVLNIALPYQDLTIMEACLRTGVPYLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLGSGF 142 (405)
T ss_dssp TCHHHHHHHHHHHCCSEEEECSCGGGHHHHHHHHHHHTCCEEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEECCBT
T ss_pred CCHHHHHHHHHhhCCCEEEECCCcccChHHHHHHHHhCCCEEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEcCCC
Confidence 0111110 0001389999999998888888889999999888643221 1112223221 11111 14678999999
Q ss_pred ccceecchhHHHhh
Q 019445 158 TTNCLAPLAKVIHD 171 (341)
Q Consensus 158 ~tt~Lapllk~L~~ 171 (341)
.+.....++..+.+
T Consensus 143 ~PG~~~l~a~~~~~ 156 (405)
T 4ina_A 143 DPGVTNVFCAYAQK 156 (405)
T ss_dssp TTBHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHH
Confidence 88774333444333
No 115
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=97.10 E-value=0.00098 Score=63.58 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=31.6
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCC---CcEEEEeeCC
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRD---DVELVAVNDP 39 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p---~~elv~i~~~ 39 (341)
.++||||+|+|.+|+.+++.|.+++ ++++++|.+.
T Consensus 3 k~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~ 40 (358)
T 1ebf_A 3 KVVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEA 40 (358)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECS
T ss_pred ceEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 4689999999999999999999876 6999999885
No 116
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=97.03 E-value=0.00027 Score=68.02 Aligned_cols=35 Identities=20% Similarity=0.314 Sum_probs=30.6
Q ss_pred CCCCCceeEEEEcc-CHHHHHHHHHHHcCCC-cEEEEee
Q 019445 1 MAGDKKIKIGINGF-GRIGRLVARVALQRDD-VELVAVN 37 (341)
Q Consensus 1 ~~~~~~irV~I~G~-G~iG~~llr~l~~~p~-~elv~i~ 37 (341)
|++ |+||+|+|+ |.||+.+++.+.+||+ ++++++.
T Consensus 1 m~~--m~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ 37 (388)
T 1r0k_A 1 MSQ--PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALT 37 (388)
T ss_dssp -CC--CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEE
T ss_pred CCC--ceEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEE
Confidence 555 379999999 9999999999999997 9999983
No 117
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=96.99 E-value=0.00049 Score=60.84 Aligned_cols=97 Identities=16% Similarity=0.279 Sum_probs=64.0
Q ss_pred ceeEEEEccCHHHHHHHHHHH-cCCCcEEEEeeCCCCChhhhhhhcccccccCc-ccCceeeecCCcceEECCEEEEEEe
Q 019445 6 KIKIGINGFGRIGRLVARVAL-QRDDVELVAVNDPFISTDYMTYMFKYDSVHGQ-WKHNELKVKDEKTLLFGEKPVAVFG 83 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~-~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~-~~~~~v~~~~~~~l~i~g~~i~v~~ 83 (341)
+.||+|+|+|..|+.+++.+. ++..++++++-|. +++. ..|+ . ++| ++++.
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~--dp~~---------kiG~~~--------------i~G--vpV~~ 136 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDL--DSND---------LVGKTT--------------EDG--IPVYG 136 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEEC--TTST---------TTTCBC--------------TTC--CBEEE
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeC--Cchh---------ccCcee--------------ECC--eEEeC
Confidence 479999999999999998753 3457999999875 2110 1121 1 112 12222
Q ss_pred cCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCC
Q 019445 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (341)
Q Consensus 84 ~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~ 130 (341)
..+.+++- ...++|+++.|+|.....+.+..+.++|+|-+.=-+|.
T Consensus 137 ~~dL~~~v-~~~~Id~vIIAvPs~~aq~v~d~lv~~GIk~I~nFap~ 182 (212)
T 3keo_A 137 ISTINDHL-IDSDIETAILTVPSTEAQEVADILVKAGIKGILSFSPV 182 (212)
T ss_dssp GGGHHHHC--CCSCCEEEECSCGGGHHHHHHHHHHHTCCEEEECSSS
T ss_pred HHHHHHHH-HHcCCCEEEEecCchhHHHHHHHHHHcCCCEEEEcCCc
Confidence 11222110 12479999999999988889999999999988755554
No 118
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=96.90 E-value=0.0033 Score=51.56 Aligned_cols=84 Identities=19% Similarity=0.289 Sum_probs=59.9
Q ss_pred ceeEEEEcc----CHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEE
Q 019445 6 KIKIGINGF----GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAV 81 (341)
Q Consensus 6 ~irV~I~G~----G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v 81 (341)
..+|||+|+ |.+|+.+++.|.+.. +++..+|-. . + . +.| +++
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G-~~V~~vnp~-~--~---------~-------------------i~G--~~~ 59 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKG-FEVLPVNPN-Y--D---------E-------------------IEG--LKC 59 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTT-CEEEEECTT-C--S---------E-------------------ETT--EEC
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCC-CEEEEeCCC-C--C---------e-------------------ECC--eee
Confidence 578999999 999999999998875 677666532 0 0 1 112 122
Q ss_pred EecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecC
Q 019445 82 FGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISA 128 (341)
Q Consensus 82 ~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa 128 (341)
+. ++++++ ..+|+|+.|+|.....+.+.+++++|++.+++..
T Consensus 60 ~~--s~~el~---~~vDlvii~vp~~~v~~v~~~~~~~g~~~i~~~~ 101 (138)
T 1y81_A 60 YR--SVRELP---KDVDVIVFVVPPKVGLQVAKEAVEAGFKKLWFQP 101 (138)
T ss_dssp BS--SGGGSC---TTCCEEEECSCHHHHHHHHHHHHHTTCCEEEECT
T ss_pred cC--CHHHhC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 21 344443 3689999999987777888888889999887764
No 119
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=96.82 E-value=0.0016 Score=60.23 Aligned_cols=88 Identities=23% Similarity=0.231 Sum_probs=60.8
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEec
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 84 (341)
++||+|+|+ |++|+.+++.+.+++ +++++..++...++ . +.| ++++.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g-~~~V~~V~p~~~g~---------~-------------------~~G--~~vy~- 54 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYG-TKMVGGVTPGKGGT---------T-------------------HLG--LPVFN- 54 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHT-CEEEEEECTTCTTC---------E-------------------ETT--EEEES-
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-CeEEEEeCCCcccc---------e-------------------eCC--eeccC-
Confidence 579999999 999999999998874 78776655511100 0 111 22332
Q ss_pred CCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEE-ec
Q 019445 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVV-IS 127 (341)
Q Consensus 85 ~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~-lS 127 (341)
+.++++- ..++|+++.|+|.....+.+.+++++|++.++ ++
T Consensus 55 -sl~el~~-~~~~D~viI~tP~~~~~~~~~ea~~~Gi~~iVi~t 96 (288)
T 2nu8_A 55 -TVREAVA-ATGATASVIYVPAPFCKDSILEAIDAGIKLIITIT 96 (288)
T ss_dssp -SHHHHHH-HHCCCEEEECCCGGGHHHHHHHHHHTTCSEEEECC
T ss_pred -CHHHHhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEEEC
Confidence 2222210 12689999999999999999999999999744 44
No 120
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=96.81 E-value=0.004 Score=58.16 Aligned_cols=35 Identities=17% Similarity=0.100 Sum_probs=26.5
Q ss_pred CCceeEEEEccCHHHHHHHHHHHcCCCc-EEEEeeCC
Q 019445 4 DKKIKIGINGFGRIGRLVARVALQRDDV-ELVAVNDP 39 (341)
Q Consensus 4 ~~~irV~I~G~G~iG~~llr~l~~~p~~-elv~i~~~ 39 (341)
++++||+|+|+|.+|+.+++.|.+.... +|+. .|+
T Consensus 31 ~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~-~dr 66 (314)
T 3ggo_A 31 LSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYG-YDI 66 (314)
T ss_dssp CSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEE-ECS
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEE-EEC
Confidence 3457999999999999999999876522 5544 454
No 121
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=96.65 E-value=0.0046 Score=51.02 Aligned_cols=84 Identities=20% Similarity=0.162 Sum_probs=60.4
Q ss_pred ceeEEEEcc----CHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEE
Q 019445 6 KIKIGINGF----GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAV 81 (341)
Q Consensus 6 ~irV~I~G~----G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v 81 (341)
+.+|+|+|+ |++|..+++.|.++. +++..++-. . ++ +.| +++
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G-~~v~~Vnp~-~-----------~~-------------------i~G--~~~ 67 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHG-YDVYPVNPK-Y-----------EE-------------------VLG--RKC 67 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTT-CEEEEECTT-C-----------SE-------------------ETT--EEC
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCC-CEEEEECCC-C-----------Ce-------------------ECC--eec
Confidence 468999999 799999999998876 677777532 0 01 112 122
Q ss_pred EecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecC
Q 019445 82 FGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISA 128 (341)
Q Consensus 82 ~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa 128 (341)
+. ++++++ ..+|+|+.|+|.....+.+.++.++|++.+++..
T Consensus 68 y~--sl~~l~---~~vDlvvi~vp~~~~~~vv~~~~~~gi~~i~~~~ 109 (144)
T 2d59_A 68 YP--SVLDIP---DKIEVVDLFVKPKLTMEYVEQAIKKGAKVVWFQY 109 (144)
T ss_dssp BS--SGGGCS---SCCSEEEECSCHHHHHHHHHHHHHHTCSEEEECT
T ss_pred cC--CHHHcC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEECC
Confidence 21 334443 3689999999998888888889999999887763
No 122
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=96.65 E-value=0.00073 Score=61.77 Aligned_cols=32 Identities=16% Similarity=0.246 Sum_probs=22.2
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
|+||||+|+|.+|..+++.|.++ ++++.+.++
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~~--~~v~~v~~~ 33 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKDR--YEIGYILSR 33 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC------CCCEECS
T ss_pred CceEEEEeCCHHHHHHHHHHHHc--CcEEEEEeC
Confidence 36899999999999999988766 566556555
No 123
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.56 E-value=0.0035 Score=54.54 Aligned_cols=35 Identities=34% Similarity=0.361 Sum_probs=27.6
Q ss_pred CCCCCceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 1 MAGDKKIKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 1 ~~~~~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
|+.| +||.|.|+ |++|+.+++.|.++. .+++++..
T Consensus 1 M~~m--~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r 36 (227)
T 3dhn_A 1 MEKV--KKIVLIGASGFVGSALLNEALNRG-FEVTAVVR 36 (227)
T ss_dssp --CC--CEEEEETCCHHHHHHHHHHHHTTT-CEEEEECS
T ss_pred CCCC--CEEEEEcCCchHHHHHHHHHHHCC-CEEEEEEc
Confidence 6553 58999999 999999999999986 67777643
No 124
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=96.46 E-value=0.0041 Score=50.04 Aligned_cols=84 Identities=18% Similarity=0.086 Sum_probs=62.9
Q ss_pred ceeEEEEcc----CHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEE
Q 019445 6 KIKIGINGF----GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAV 81 (341)
Q Consensus 6 ~irV~I~G~----G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v 81 (341)
+.+|||+|+ ++.|..+++.|.++. +++.+||-. ++.. .|. +.
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g-~~V~pVnP~------------~~~i-------------------~G~--~~ 49 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHG-HEFIPVGRK------------KGEV-------------------LGK--TI 49 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHT-CCEEEESSS------------CSEE-------------------TTE--EC
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCC-CeEEEECCC------------CCcC-------------------CCe--ec
Confidence 458999999 679999999999886 588898743 1121 121 11
Q ss_pred EecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCC
Q 019445 82 FGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 82 ~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
+. +.++++ . +|+|+.++|.....+.++++.+.|+|.|+++.-
T Consensus 50 y~--sl~dlp---~-vDlavi~~p~~~v~~~v~e~~~~g~k~v~~~~G 91 (122)
T 3ff4_A 50 IN--ERPVIE---G-VDTVTLYINPQNQLSEYNYILSLKPKRVIFNPG 91 (122)
T ss_dssp BC--SCCCCT---T-CCEEEECSCHHHHGGGHHHHHHHCCSEEEECTT
T ss_pred cC--ChHHCC---C-CCEEEEEeCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 21 455664 4 899999999998888899999999999888743
No 125
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=96.43 E-value=0.0076 Score=49.75 Aligned_cols=86 Identities=14% Similarity=0.147 Sum_probs=59.9
Q ss_pred ceeEEEEcc----CHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEE
Q 019445 6 KIKIGINGF----GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAV 81 (341)
Q Consensus 6 ~irV~I~G~----G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v 81 (341)
+.+|||+|+ |.+|..+++.|.+.. +++..+|-. ..++ . +.| +++
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G-~~v~~vnp~-~~g~---------~-------------------i~G--~~~ 60 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQG-YHVIPVSPK-VAGK---------T-------------------LLG--QQG 60 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHT-CCEEEECSS-STTS---------E-------------------ETT--EEC
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCC-CEEEEeCCc-cccc---------c-------------------cCC--eec
Confidence 468999999 889999999998776 576666532 1000 0 112 122
Q ss_pred EecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecC
Q 019445 82 FGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISA 128 (341)
Q Consensus 82 ~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa 128 (341)
+. ++++++ ..+|+|+.|+|.....+.+..++++|++.+++..
T Consensus 61 ~~--sl~el~---~~~Dlvii~vp~~~v~~v~~~~~~~g~~~i~i~~ 102 (145)
T 2duw_A 61 YA--TLADVP---EKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQL 102 (145)
T ss_dssp CS--STTTCS---SCCSEEECCSCSTHHHHHHHHHHHHTCCEEECCT
T ss_pred cC--CHHHcC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 22 455553 3789999999988778888888889998888753
No 126
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=96.43 E-value=0.0014 Score=57.89 Aligned_cols=34 Identities=21% Similarity=0.247 Sum_probs=28.0
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
+|+||+|+|+|.+|..+++.|.+.. .+++.+.++
T Consensus 22 ~mmkI~IIG~G~mG~~la~~l~~~g-~~V~~v~~r 55 (220)
T 4huj_A 22 SMTTYAIIGAGAIGSALAERFTAAQ-IPAIIANSR 55 (220)
T ss_dssp GSCCEEEEECHHHHHHHHHHHHHTT-CCEEEECTT
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCC-CEEEEEECC
Confidence 4579999999999999999998775 577665665
No 127
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=96.30 E-value=0.0069 Score=54.55 Aligned_cols=33 Identities=18% Similarity=0.300 Sum_probs=27.2
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
++||+|+|+|.+|+.+++.|.+.. ++++.+.++
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g-~~~v~~~~~ 42 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKG-FRIVQVYSR 42 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHT-CCEEEEECS
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCC-CeEEEEEeC
Confidence 469999999999999999988764 566677665
No 128
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=96.25 E-value=0.0065 Score=55.48 Aligned_cols=36 Identities=17% Similarity=0.192 Sum_probs=27.6
Q ss_pred CCCCCceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 1 MAGDKKIKIGINGF-GRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 1 ~~~~~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
|+.| |+||+|+|+ |.+|+.+++.|.++. .+++ +.++
T Consensus 7 ~~~m-mm~I~iIG~tG~mG~~la~~l~~~g-~~V~-~~~r 43 (286)
T 3c24_A 7 NDVG-PKTVAILGAGGKMGARITRKIHDSA-HHLA-AIEI 43 (286)
T ss_dssp CSCC-CCEEEEETTTSHHHHHHHHHHHHSS-SEEE-EECC
T ss_pred cccc-CCEEEEECCCCHHHHHHHHHHHhCC-CEEE-EEEC
Confidence 4443 469999999 999999999998875 5765 4444
No 129
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=96.23 E-value=0.0071 Score=55.20 Aligned_cols=35 Identities=23% Similarity=0.254 Sum_probs=26.4
Q ss_pred CCceeEEEEccCHHHHHHHHHHHcCC-CcEEEEeeCC
Q 019445 4 DKKIKIGINGFGRIGRLVARVALQRD-DVELVAVNDP 39 (341)
Q Consensus 4 ~~~irV~I~G~G~iG~~llr~l~~~p-~~elv~i~~~ 39 (341)
|+++||+|+|+|.+|..+++.|.++. ..++.. .++
T Consensus 4 M~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~-~d~ 39 (290)
T 3b1f_A 4 MEEKTIYIAGLGLIGASLALGIKRDHPHYKIVG-YNR 39 (290)
T ss_dssp GCCCEEEEECCSHHHHHHHHHHHHHCTTSEEEE-ECS
T ss_pred cccceEEEEeeCHHHHHHHHHHHhCCCCcEEEE-EcC
Confidence 34579999999999999999988653 356544 444
No 130
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=96.17 E-value=0.029 Score=50.40 Aligned_cols=33 Identities=12% Similarity=0.174 Sum_probs=27.7
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
||+||.|.|+|++|+.+++.|.++. .+++++..
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g-~~V~~~~r 36 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQG-WRIIGTSR 36 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGT-CEEEEEES
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCC-CEEEEEEc
Confidence 4579999999999999999999875 67777754
No 131
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=96.15 E-value=0.012 Score=55.89 Aligned_cols=110 Identities=14% Similarity=0.139 Sum_probs=61.9
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcce--EECCEEEEEE
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTL--LFGEKPVAVF 82 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l--~i~g~~i~v~ 82 (341)
+.||+|+|+ |.||...++.+.+|+.++++++... .+.+.++...+ ...+++ +-+.+.... .. + ....
T Consensus 3 ~k~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~a~-~n~~~l~~q~~--~f~p~~----v~v~~~~~~~~~l--~-~~~~ 72 (376)
T 3a06_A 3 ERTLVILGATGSIGTQTLDVLKKVKGIRLIGISFH-SNLELAFKIVK--EFNVKN----VAITGDVEFEDSS--I-NVWK 72 (376)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHSCSEEEEEEEES-SCHHHHHHHHH--HHTCCE----EEECSSCCCCCSS--S-EEEE
T ss_pred cceEEEECCCCHHHHHHHHHHHhCCCeEEEEEEcc-CCHHHHHHHHH--HcCCCE----EEEccHHHHHHHH--H-HHcc
Confidence 378999999 9999999999999978999999543 33333322211 001111 000000000 00 0 0000
Q ss_pred ecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEec
Q 019445 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVIS 127 (341)
Q Consensus 83 ~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lS 127 (341)
.+....++- ...++|+|+.|++.+...+-.-.++++|. .|.+.
T Consensus 73 G~~~l~el~-~~~~~D~Vv~AivG~aGL~ptlaAi~aGK-~vaLA 115 (376)
T 3a06_A 73 GSHSIEEML-EALKPDITMVAVSGFSGLRAVLASLEHSK-RVCLA 115 (376)
T ss_dssp STTHHHHHH-HHHCCSEEEECCCSTTHHHHHHHHHHHCS-EEEEC
T ss_pred CHHHHHHHh-cCCCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEe
Confidence 000000110 01368999999999998888888899995 45553
No 132
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=96.12 E-value=0.012 Score=51.79 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=28.1
Q ss_pred CCceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEee
Q 019445 4 DKKIKIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 4 ~~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~ 37 (341)
|+|++|.|.|+ |.+|+.+++.|+++...+++.+.
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~ 55 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFA 55 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEE
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEE
Confidence 45678999999 99999999999988756776664
No 133
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=96.04 E-value=0.0072 Score=49.60 Aligned_cols=88 Identities=11% Similarity=0.019 Sum_probs=60.8
Q ss_pred ceeEEEEcc----CHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEE
Q 019445 6 KIKIGINGF----GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAV 81 (341)
Q Consensus 6 ~irV~I~G~----G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v 81 (341)
+.+|+|+|+ |..|..+++.|.++. +++..+|-. .. .+. +.| +++
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G-~~v~~vnp~-~~---------~~~-------------------i~G--~~~ 60 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQG-YRVLPVNPR-FQ---------GEE-------------------LFG--EEA 60 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTT-CEEEEECGG-GT---------TSE-------------------ETT--EEC
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCC-CEEEEeCCC-cc---------cCc-------------------CCC--EEe
Confidence 358999999 799999999998876 677666532 00 011 112 122
Q ss_pred EecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecCCC
Q 019445 82 FGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 130 (341)
Q Consensus 82 ~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa~~ 130 (341)
+. +.++++ ..+|+++.|+|.....+.+.++.+.|+|.+++.+..
T Consensus 61 ~~--sl~el~---~~vDlavi~vp~~~~~~v~~~~~~~gi~~i~~~~g~ 104 (140)
T 1iuk_A 61 VA--SLLDLK---EPVDILDVFRPPSALMDHLPEVLALRPGLVWLQSGI 104 (140)
T ss_dssp BS--SGGGCC---SCCSEEEECSCHHHHTTTHHHHHHHCCSCEEECTTC
T ss_pred cC--CHHHCC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCCc
Confidence 21 334443 378999999999877788888889999988887543
No 134
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=95.98 E-value=0.0067 Score=55.75 Aligned_cols=37 Identities=27% Similarity=0.236 Sum_probs=26.7
Q ss_pred CCCCC-ceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 1 MAGDK-KIKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 1 ~~~~~-~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
|+.+. |.+|.|.|+ |.+|+.+++.|+++. .++.++..
T Consensus 5 m~~~~m~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R 43 (318)
T 2r6j_A 5 MEENGMKSKILIFGGTGYIGNHMVKGSLKLG-HPTYVFTR 43 (318)
T ss_dssp ----CCCCCEEEETTTSTTHHHHHHHHHHTT-CCEEEEEC
T ss_pred ccccCCCCeEEEECCCchHHHHHHHHHHHCC-CcEEEEEC
Confidence 44432 358999999 999999999999876 56666653
No 135
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=95.95 E-value=0.0075 Score=55.67 Aligned_cols=88 Identities=18% Similarity=0.186 Sum_probs=59.7
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEec
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 84 (341)
..||+|+|+ |+.|+.+++.+.++ .+++++..++...++ . +.| ++++.
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~-g~~~v~~VnP~~~g~--------------------------~--i~G--~~vy~- 54 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTY-GTKIVAGVTPGKGGM--------------------------E--VLG--VPVYD- 54 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCTTC--------------------------E--ETT--EEEES-
T ss_pred CCEEEEECCCCCHHHHHHHHHHHc-CCeEEEEECCCCCCc--------------------------e--ECC--EEeeC-
Confidence 479999999 99999999998887 477764444411100 0 112 23332
Q ss_pred CCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcE-EEec
Q 019445 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKK-VVIS 127 (341)
Q Consensus 85 ~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~-V~lS 127 (341)
+.++++- ..++|+++.++|.....+.+.+++++|++. |+++
T Consensus 55 -sl~el~~-~~~~Dv~Ii~vp~~~~~~~~~ea~~~Gi~~vVi~t 96 (288)
T 1oi7_A 55 -TVKEAVA-HHEVDASIIFVPAPAAADAALEAAHAGIPLIVLIT 96 (288)
T ss_dssp -SHHHHHH-HSCCSEEEECCCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred -CHHHHhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEEEC
Confidence 2222210 126899999999999999999999999994 5555
No 136
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=95.95 E-value=0.01 Score=54.13 Aligned_cols=35 Identities=20% Similarity=0.230 Sum_probs=27.4
Q ss_pred CCCCCceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 1 MAGDKKIKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 1 ~~~~~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
|+. |++|.|.|+ |.+|+.+++.|+++. .+++++..
T Consensus 1 M~~--~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R 36 (313)
T 1qyd_A 1 MDK--KSRVLIVGGTGYIGKRIVNASISLG-HPTYVLFR 36 (313)
T ss_dssp -CC--CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECC
T ss_pred CCC--CCEEEEEcCCcHHHHHHHHHHHhCC-CcEEEEEC
Confidence 654 358999999 999999999999876 57766643
No 137
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.95 E-value=0.0071 Score=48.41 Aligned_cols=36 Identities=25% Similarity=0.405 Sum_probs=25.1
Q ss_pred CCCCCceeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 1 MAGDKKIKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 1 ~~~~~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
|..+++.+|.|+|+|.+|+.+++.|.+.. .+++.+.
T Consensus 1 m~~~~~~~v~I~G~G~iG~~~a~~l~~~g-~~v~~~d 36 (144)
T 2hmt_A 1 MGRIKNKQFAVIGLGRFGGSIVKELHRMG-HEVLAVD 36 (144)
T ss_dssp -----CCSEEEECCSHHHHHHHHHHHHTT-CCCEEEE
T ss_pred CCCCcCCcEEEECCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 54444568999999999999999998765 4555553
No 138
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.83 E-value=0.018 Score=47.47 Aligned_cols=30 Identities=37% Similarity=0.499 Sum_probs=25.6
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+|.|+|+|++|+.+++.|.... .+++.+.
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g-~~V~vid 49 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSG-HSVVVVD 49 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCC-CeEEEEE
Confidence 68999999999999999998775 5776664
No 139
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=95.78 E-value=0.015 Score=54.35 Aligned_cols=39 Identities=23% Similarity=0.191 Sum_probs=26.9
Q ss_pred CCCCCceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 1 MAGDKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 1 ~~~~~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
|..|+++||+|+|+|.+|..++..|..++.+.-+.+.|.
T Consensus 1 m~~m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di 39 (317)
T 3d0o_A 1 MNKFKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDL 39 (317)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECS
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 656667899999999999999988887653333344454
No 140
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=95.65 E-value=0.027 Score=45.37 Aligned_cols=92 Identities=17% Similarity=0.137 Sum_probs=57.2
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEec
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 84 (341)
.+.|+.|+|+|..|+.+++.+.+++.++++++.|. +.. ..|. .+.| ++++..
T Consensus 3 ~~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~--~~~----------~~g~--------------~i~g--~pV~g~ 54 (141)
T 3nkl_A 3 AKKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDD--DRK----------KHKT--------------TMQG--ITIYRP 54 (141)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECS--CGG----------GTTC--------------EETT--EEEECG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEEC--Ccc----------cCCC--------------EecC--eEEECH
Confidence 35789999999999999999998888999999875 111 0110 0122 223320
Q ss_pred CCCCCCCccCCCccEEEecCCCccC---HHHHHHHHhCCCcEEE
Q 019445 85 RNPEEIPWAKTGAEYVVESTGVFTD---KDKAAAHLKGGAKKVV 125 (341)
Q Consensus 85 ~~~~~~~w~~~~~DvV~~at~~~~s---~~~~~~~l~~G~k~V~ 125 (341)
.+..++ ....++|.|+.|.|.... .+.+..+.+.|+++..
T Consensus 55 ~~l~~~-~~~~~id~viia~~~~~~~~~~~i~~~l~~~gv~v~~ 97 (141)
T 3nkl_A 55 KYLERL-IKKHCISTVLLAVPSASQVQKKVIIESLAKLHVEVLT 97 (141)
T ss_dssp GGHHHH-HHHHTCCEEEECCTTSCHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHH-HHHCCCCEEEEeCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 011110 011368999999997544 4555666778886544
No 141
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=95.60 E-value=0.05 Score=46.94 Aligned_cols=30 Identities=30% Similarity=0.373 Sum_probs=26.2
Q ss_pred eEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 8 KIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 8 rV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
||.|.|+ |.+|+.+++.|.++. .+++++..
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g-~~V~~~~R 32 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTD-YQIYAGAR 32 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSS-CEEEEEES
T ss_pred eEEEECCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 7999999 999999999999886 67777754
No 142
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=95.58 E-value=0.015 Score=52.51 Aligned_cols=31 Identities=16% Similarity=0.203 Sum_probs=26.3
Q ss_pred eEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 8 KIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 8 rV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
||.|.|+ |.+|+.+++.|.+.+..+++++..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R 33 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVR 33 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEES
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEEC
Confidence 7999999 999999999998875567777754
No 143
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=95.54 E-value=0.0075 Score=57.53 Aligned_cols=94 Identities=20% Similarity=0.200 Sum_probs=58.3
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEecC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 85 (341)
..||+|+|+|++|+.+++.|.++ .++ .|.++ +.+....+. . .+. .+.++ +....
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~--~~V-~V~~R--~~~~a~~la---~---~~~----------~~~~d-----~~~~~ 69 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE--FDV-YIGDV--NNENLEKVK---E---FAT----------PLKVD-----ASNFD 69 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT--SEE-EEEES--CHHHHHHHT---T---TSE----------EEECC-----TTCHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC--CeE-EEEEC--CHHHHHHHH---h---hCC----------eEEEe-----cCCHH
Confidence 47999999999999999999887 564 55555 222211111 0 000 00000 00000
Q ss_pred CCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecC
Q 019445 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISA 128 (341)
Q Consensus 86 ~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa 128 (341)
+++++ ..++|+|+.|+|.....+.+..++++|+..+|+|.
T Consensus 70 ~l~~l---l~~~DvVIn~~P~~~~~~v~~a~l~~G~~~vD~s~ 109 (365)
T 2z2v_A 70 KLVEV---MKEFELVIGALPGFLGFKSIKAAIKSKVDMVDVSF 109 (365)
T ss_dssp HHHHH---HTTCSCEEECCCHHHHHHHHHHHHHTTCCEEECCC
T ss_pred HHHHH---HhCCCEEEECCChhhhHHHHHHHHHhCCeEEEccC
Confidence 01111 23789999999988777788888999998888774
No 144
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=95.50 E-value=0.014 Score=53.07 Aligned_cols=34 Identities=29% Similarity=0.375 Sum_probs=26.5
Q ss_pred CCCCCceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEee
Q 019445 1 MAGDKKIKIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 1 ~~~~~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~ 37 (341)
|+. |++|.|.|+ |.+|+.+++.|++++ .+++++.
T Consensus 1 M~~--~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~ 35 (308)
T 1qyc_A 1 MGS--RSRILLIGATGYIGRHVAKASLDLG-HPTFLLV 35 (308)
T ss_dssp -CC--CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEEC
T ss_pred CCC--CCEEEEEcCCcHHHHHHHHHHHhCC-CCEEEEE
Confidence 654 358999999 999999999999876 5666654
No 145
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=95.38 E-value=0.02 Score=52.73 Aligned_cols=32 Identities=28% Similarity=0.464 Sum_probs=25.9
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
++||+|+|+|++|..+.+.|.+.. .++... ++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G-~~V~~~-dr 38 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAG-LSTWGA-DL 38 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CeEEEE-EC
Confidence 469999999999999999998875 565544 44
No 146
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.32 E-value=0.0099 Score=58.61 Aligned_cols=97 Identities=11% Similarity=0.112 Sum_probs=56.5
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEecC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 85 (341)
+.||.|+|+|.+|+.+++.|.+++.++++.+ ++ +.+....+.. . .+ .. . + ...-.
T Consensus 23 ~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~-~R--~~~ka~~la~--~-~~-~~----------~-------~-~~D~~ 77 (467)
T 2axq_A 23 GKNVLLLGSGFVAQPVIDTLAANDDINVTVA-CR--TLANAQALAK--P-SG-SK----------A-------I-SLDVT 77 (467)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSTTEEEEEE-ES--SHHHHHHHHG--G-GT-CE----------E-------E-ECCTT
T ss_pred CCEEEEECChHHHHHHHHHHHhCCCCeEEEE-EC--CHHHHHHHHH--h-cC-Cc----------E-------E-EEecC
Confidence 4689999999999999999999866776544 44 1211111110 0 00 00 0 0 00000
Q ss_pred CCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEec
Q 019445 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVIS 127 (341)
Q Consensus 86 ~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lS 127 (341)
+.+.+.-...++|+|+.|+|.+.........+++|...++++
T Consensus 78 d~~~l~~~l~~~DvVIn~tp~~~~~~v~~a~l~~g~~vvd~~ 119 (467)
T 2axq_A 78 DDSALDKVLADNDVVISLIPYTFHPNVVKSAIRTKTDVVTSS 119 (467)
T ss_dssp CHHHHHHHHHTSSEEEECSCGGGHHHHHHHHHHHTCEEEECS
T ss_pred CHHHHHHHHcCCCEEEECCchhhhHHHHHHHHhcCCEEEEee
Confidence 111110001378999999998876666677788888666654
No 147
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=95.23 E-value=0.016 Score=54.19 Aligned_cols=32 Identities=16% Similarity=0.149 Sum_probs=24.7
Q ss_pred CCceeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 4 DKKIKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 4 ~~~irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
|+++||+|+|+|.+|..+.+.|.+.. .++..+
T Consensus 2 m~~mki~iiG~G~~G~~~a~~L~~~g-~~V~~~ 33 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGHAFAAYLALKG-QSVLAW 33 (359)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCcCeEEEECCCHHHHHHHHHHHhCC-CEEEEE
Confidence 34579999999999999999988765 565544
No 148
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=95.19 E-value=0.032 Score=47.24 Aligned_cols=31 Identities=29% Similarity=0.305 Sum_probs=26.4
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
++|.|.|+ |++|+.+++.|.++. .+++.+..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g-~~V~~~~r 35 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVR 35 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEe
Confidence 58999999 999999999999876 67777653
No 149
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=95.14 E-value=0.03 Score=51.83 Aligned_cols=89 Identities=19% Similarity=0.218 Sum_probs=59.3
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEec
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 84 (341)
+.||+|+|+ |+.|+.+++.+.++. +++++..++...++ . +.| ++++.
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~g-~~~v~~VnP~~~g~---------~-------------------i~G--~~vy~- 60 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEYG-TKVVAGVTPGKGGS---------E-------------------VHG--VPVYD- 60 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHT-CEEEEEECTTCTTC---------E-------------------ETT--EEEES-
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCC-CcEEEEeCCCCCCc---------e-------------------ECC--EeeeC-
Confidence 468999999 999999999998874 77654333411100 0 112 23332
Q ss_pred CCCCCCCccCCC-ccEEEecCCCccCHHHHHHHHhCCCc-EEEecC
Q 019445 85 RNPEEIPWAKTG-AEYVVESTGVFTDKDKAAAHLKGGAK-KVVISA 128 (341)
Q Consensus 85 ~~~~~~~w~~~~-~DvV~~at~~~~s~~~~~~~l~~G~k-~V~lSa 128 (341)
+.++++- ..+ +|+++.++|.....+.+.+++++|++ .|++|.
T Consensus 61 -sl~el~~-~~~~~DvaIi~vp~~~~~~~v~ea~~~Gi~~vVi~t~ 104 (297)
T 2yv2_A 61 -SVKEALA-EHPEINTSIVFVPAPFAPDAVYEAVDAGIRLVVVITE 104 (297)
T ss_dssp -SHHHHHH-HCTTCCEEEECCCGGGHHHHHHHHHHTTCSEEEECCC
T ss_pred -CHHHHhh-cCCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECC
Confidence 2223320 013 89999999999999999999999999 555564
No 150
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=95.12 E-value=0.022 Score=52.68 Aligned_cols=89 Identities=24% Similarity=0.236 Sum_probs=59.3
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEec
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 84 (341)
+.|++|+|+ |+.|+.+++.+.++. +++++-.++...++ . +.| ++++.
T Consensus 13 ~~~v~V~Gasg~~G~~~~~~l~~~g-~~~V~~VnP~~~g~---------~-------------------i~G--~~vy~- 60 (294)
T 2yv1_A 13 NTKAIVQGITGRQGSFHTKKMLECG-TKIVGGVTPGKGGQ---------N-------------------VHG--VPVFD- 60 (294)
T ss_dssp TCCEEEETTTSHHHHHHHHHHHHTT-CCEEEEECTTCTTC---------E-------------------ETT--EEEES-
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCC-CeEEEEeCCCCCCc---------e-------------------ECC--EeeeC-
Confidence 368999999 999999999998874 66554333411100 0 112 23332
Q ss_pred CCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCc-EEEecC
Q 019445 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAK-KVVISA 128 (341)
Q Consensus 85 ~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k-~V~lSa 128 (341)
+.++++- ..++|+++.++|.....+.+.+++++|++ .|+++.
T Consensus 61 -sl~el~~-~~~~Dv~ii~vp~~~~~~~v~ea~~~Gi~~vVi~t~ 103 (294)
T 2yv1_A 61 -TVKEAVK-ETDANASVIFVPAPFAKDAVFEAIDAGIELIVVITE 103 (294)
T ss_dssp -SHHHHHH-HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred -CHHHHhh-cCCCCEEEEccCHHHHHHHHHHHHHCCCCEEEEECC
Confidence 2233320 11689999999999999999999999999 455554
No 151
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=95.11 E-value=0.015 Score=54.04 Aligned_cols=33 Identities=27% Similarity=0.457 Sum_probs=25.0
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCc-EEEEeeCC
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDV-ELVAVNDP 39 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~-elv~i~~~ 39 (341)
.++||||+|+|++|..+.+.|.++. . ++ .+.++
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G-~~~V-~~~dr 56 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAG-AIDM-AAYDA 56 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHS-CCEE-EEECS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCC-CCeE-EEEcC
Confidence 3579999999999999999998765 4 44 44454
No 152
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.09 E-value=0.0035 Score=51.21 Aligned_cols=31 Identities=23% Similarity=0.143 Sum_probs=26.0
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
.||+|+|+|.+|+.+++.|...+ ++ +.+.++
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g-~~-v~v~~r 52 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQ-YK-VTVAGR 52 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTT-CE-EEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CE-EEEEcC
Confidence 58999999999999999888754 78 666665
No 153
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.08 E-value=0.055 Score=46.32 Aligned_cols=30 Identities=40% Similarity=0.519 Sum_probs=26.2
Q ss_pred eEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 8 KIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 8 rV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
||.|.|+ |.+|+.+++.|.++. .+++++..
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g-~~V~~~~R 32 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRG-HEVTAIVR 32 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred eEEEEcCCchhHHHHHHHHHhCC-CEEEEEEc
Confidence 7999999 999999999999886 67777754
No 154
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=95.07 E-value=0.019 Score=49.78 Aligned_cols=32 Identities=22% Similarity=0.266 Sum_probs=25.7
Q ss_pred CceeEEEEcc-CHHHHHHHHHHH-cCCCcEEEEee
Q 019445 5 KKIKIGINGF-GRIGRLVARVAL-QRDDVELVAVN 37 (341)
Q Consensus 5 ~~irV~I~G~-G~iG~~llr~l~-~~p~~elv~i~ 37 (341)
||.+|.|.|+ |.+|+.+++.|. +.. .+++.+.
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g-~~V~~~~ 37 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTD-MHITLYG 37 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCC-CEEEEEE
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCC-ceEEEEe
Confidence 4445999999 999999999998 554 6777664
No 155
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=94.92 E-value=0.022 Score=51.33 Aligned_cols=32 Identities=28% Similarity=0.320 Sum_probs=26.8
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
|+||.|.|+|++|+.+++.|.++. .+++++..
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g-~~V~~~~r 34 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQG-HEVTGLRR 34 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT-CCEEEEEC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 458999999999999999999875 57777753
No 156
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=94.89 E-value=0.048 Score=49.28 Aligned_cols=32 Identities=19% Similarity=0.200 Sum_probs=24.6
Q ss_pred eeEEEEccCHHHHHHHHHHHcCC-CcEEEEeeCC
Q 019445 7 IKIGINGFGRIGRLVARVALQRD-DVELVAVNDP 39 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p-~~elv~i~~~ 39 (341)
+||+|+|+|.+|..+++.|.+.. ..+++. .++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~-~d~ 34 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYG-YDI 34 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEE-ECS
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEE-EeC
Confidence 48999999999999999998764 236544 444
No 157
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=94.81 E-value=0.023 Score=52.88 Aligned_cols=33 Identities=30% Similarity=0.407 Sum_probs=27.1
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
++||.|.|+ |++|+.+++.|++++ .++.++...
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R~ 43 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAH-RPTYILARP 43 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEECS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC-CCEEEEECC
Confidence 468999999 999999999999886 577776543
No 158
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=94.78 E-value=0.018 Score=53.62 Aligned_cols=32 Identities=25% Similarity=0.232 Sum_probs=25.9
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
++||||+|+|++|..+.+.|.+.. .++... ++
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G-~~V~~~-dr 62 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAG-YALQVW-NR 62 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CCEEEEECccHHHHHHHHHHHhCC-CeEEEE-cC
Confidence 469999999999999999998875 565544 44
No 159
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=94.73 E-value=0.027 Score=51.11 Aligned_cols=33 Identities=27% Similarity=0.278 Sum_probs=27.3
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
+++|.|.|+ |.+|+.+++.|.+++..+++++..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R 38 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTR 38 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEES
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEc
Confidence 358999999 999999999998875467777753
No 160
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=94.70 E-value=0.089 Score=49.22 Aligned_cols=34 Identities=35% Similarity=0.357 Sum_probs=27.2
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
+++||+|+|+|.+|..++.+|.....++ +.+.|.
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g~~~-V~L~Di 46 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKDLGD-VYMFDI 46 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEEC
Confidence 4469999999999999999888776447 556665
No 161
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=94.68 E-value=0.02 Score=52.13 Aligned_cols=31 Identities=23% Similarity=0.352 Sum_probs=24.8
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
|+||+|+|+|.+|+.+++.|.+.. .++...+
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~ 33 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAG-HQLHVTT 33 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTT-CEEEECC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCC-CEEEEEc
Confidence 459999999999999999998765 5765443
No 162
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=94.55 E-value=0.04 Score=50.28 Aligned_cols=34 Identities=15% Similarity=0.178 Sum_probs=25.6
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCC-c-EEEEeeCC
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDD-V-ELVAVNDP 39 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~-~-elv~i~~~ 39 (341)
+++||+|+|+|.+|..+++.|.++.. . ++ .+.++
T Consensus 2 ~~~~I~iIG~G~mG~aia~~l~~~g~~~~~V-~v~dr 37 (280)
T 3tri_A 2 NTSNITFIGGGNMARNIVVGLIANGYDPNRI-CVTNR 37 (280)
T ss_dssp CCSCEEEESCSHHHHHHHHHHHHTTCCGGGE-EEECS
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCCCCeE-EEEeC
Confidence 34689999999999999999987641 1 43 45555
No 163
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=94.49 E-value=0.066 Score=47.87 Aligned_cols=30 Identities=30% Similarity=0.532 Sum_probs=24.4
Q ss_pred eEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 8 KIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 8 rV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
||+|+|+|.+|..+.+.|.+.. +++.. .++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g-~~V~~-~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRG-VEVVT-SLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTT-CEEEE-CCT
T ss_pred eEEEEechHHHHHHHHHHHHCC-CeEEE-eCC
Confidence 8999999999999999998765 56655 343
No 164
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.33 E-value=0.044 Score=51.98 Aligned_cols=24 Identities=33% Similarity=0.380 Sum_probs=21.5
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRD 29 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p 29 (341)
++||+|+|+|.+|..+...|.+..
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G 52 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKG 52 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTT
T ss_pred CCeEEEECccHHHHHHHHHHHHCC
Confidence 469999999999999999998764
No 165
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=94.27 E-value=0.34 Score=42.10 Aligned_cols=33 Identities=18% Similarity=0.304 Sum_probs=27.2
Q ss_pred CceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 5 KKIKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 5 ~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
+.++|.|.|+ |.+|+.+++.|+++. .+++.+..
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G-~~V~~~~R 53 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKG-HEPVAMVR 53 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCC-CeEEEEEC
Confidence 3468999999 999999999999876 57777653
No 166
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.21 E-value=0.033 Score=44.80 Aligned_cols=36 Identities=17% Similarity=0.168 Sum_probs=26.2
Q ss_pred CCCCCceeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 1 MAGDKKIKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 1 ~~~~~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
|..+.|.+|.|+|+|++|+.+++.|.++. .+++.+.
T Consensus 1 m~~~~~~~v~I~G~G~iG~~la~~L~~~g-~~V~~id 36 (141)
T 3llv_A 1 MTENGRYEYIVIGSEAAGVGLVRELTAAG-KKVLAVD 36 (141)
T ss_dssp -----CCSEEEECCSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCC-CeEEEEE
Confidence 44444568999999999999999998875 5666664
No 167
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=94.08 E-value=0.06 Score=50.08 Aligned_cols=38 Identities=18% Similarity=0.246 Sum_probs=28.3
Q ss_pred CCCCCceeEEEEccCHHHHHHHHHHHcCCCc-EEEEeeCC
Q 019445 1 MAGDKKIKIGINGFGRIGRLVARVALQRDDV-ELVAVNDP 39 (341)
Q Consensus 1 ~~~~~~irV~I~G~G~iG~~llr~l~~~p~~-elv~i~~~ 39 (341)
|..++++||+|+|+|.+|..++..|...+-+ ||+. .|.
T Consensus 1 m~~~~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l-~Di 39 (316)
T 1ldn_A 1 MKNNGGARVVVIGAGFVGASYVFALMNQGIADEIVL-IDA 39 (316)
T ss_dssp CTTTTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEE-ECS
T ss_pred CCCCCCCEEEEECcCHHHHHHHHHHHhCCCCCEEEE-EeC
Confidence 6666668999999999999999888765533 4444 454
No 168
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=94.07 E-value=0.04 Score=50.19 Aligned_cols=31 Identities=19% Similarity=0.394 Sum_probs=25.4
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
+||+|+|+|++|..+.+.|.++. .+++ +.++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G-~~V~-~~dr 32 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAG-CSVT-IWNR 32 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS
T ss_pred CEEEEEeecHHHHHHHHHHHHCC-CeEE-EEcC
Confidence 48999999999999999998876 5665 4454
No 169
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.07 E-value=0.081 Score=49.01 Aligned_cols=31 Identities=19% Similarity=0.283 Sum_probs=24.5
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
++||+|+|+|.+|..+...|.+.. .++..+.
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g-~~V~~~~ 32 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTG-HCVSVVS 32 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCC-CeEEEEe
Confidence 369999999999999999988764 4665554
No 170
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=94.05 E-value=0.19 Score=46.71 Aligned_cols=33 Identities=33% Similarity=0.385 Sum_probs=25.1
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCc-EEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDV-ELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~-elv~i~~~ 39 (341)
++||+|+|+|++|..++-.|...+.+ ||+ +.|.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~-L~Di 40 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELV-LIDV 40 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEE-EECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEE-EEeC
Confidence 47999999999999999888877633 444 3354
No 171
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=94.04 E-value=0.056 Score=53.20 Aligned_cols=100 Identities=10% Similarity=0.122 Sum_probs=59.9
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCc---EEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEE
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDV---ELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVF 82 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~---elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 82 (341)
+.||.|+|||-||+.++++|.+|+++ +++-+ |.......+...+.. ++. .+ .++...+
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~va-D~~~~~~~~~~~~g~-----~~~--~~--------~Vdadnv--- 73 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTII-AAEGTKVDVAQQYGV-----SFK--LQ--------QITPQNY--- 73 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEE-ESSCCSCCHHHHHTC-----EEE--EC--------CCCTTTH---
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEe-ccchhhhhHHhhcCC-----cee--EE--------eccchhH---
Confidence 36899999999999999999999876 45544 432221111110000 000 00 0000000
Q ss_pred ecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEecC
Q 019445 83 GFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISA 128 (341)
Q Consensus 83 ~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lSa 128 (341)
+...+.+ ..+.|+|+.+++...+...+..++++|+-.++.+.
T Consensus 74 -~~~l~aL---l~~~DvVIN~s~~~~~l~Im~acleaGv~YlDTa~ 115 (480)
T 2ph5_A 74 -LEVIGST---LEENDFLIDVSIGISSLALIILCNQKGALYINAAT 115 (480)
T ss_dssp -HHHTGGG---CCTTCEEEECCSSSCHHHHHHHHHHHTCEEEESSC
T ss_pred -HHHHHHH---hcCCCEEEECCccccCHHHHHHHHHcCCCEEECCC
Confidence 0001111 11349999999999999999999999998888765
No 172
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=94.02 E-value=0.087 Score=48.39 Aligned_cols=31 Identities=26% Similarity=0.404 Sum_probs=26.5
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
|||.|.|+ |++|+.+++.|.++. .+++++..
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 45 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAG-HDLVLIHR 45 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CEEEEEec
Confidence 58999999 999999999999875 57777653
No 173
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=94.00 E-value=0.037 Score=50.67 Aligned_cols=32 Identities=28% Similarity=0.268 Sum_probs=26.5
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
|++|.|.|+ |.+|+.+++.|+++. .+++++.-
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R 36 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFS-HPTFIYAR 36 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTT-CCEEEEEC
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCC-CcEEEEEC
Confidence 458999999 999999999999875 56666653
No 174
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=93.96 E-value=0.038 Score=51.73 Aligned_cols=38 Identities=26% Similarity=0.315 Sum_probs=29.3
Q ss_pred CCCCCceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 1 MAGDKKIKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 1 ~~~~~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
|..|+|+||.|.|+ |++|+.+++.|++++..+|+++..
T Consensus 19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r 57 (372)
T 3slg_A 19 PGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDM 57 (372)
T ss_dssp ----CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEES
T ss_pred CcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeC
Confidence 45566789999999 999999999999875578877754
No 175
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=93.95 E-value=0.058 Score=50.68 Aligned_cols=32 Identities=31% Similarity=0.311 Sum_probs=26.4
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
+++|.|.|+ |.+|+.+++.|.++. .+++++..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R 37 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVG-HHVRAQVH 37 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEEC
Confidence 468999999 999999999998765 57776653
No 176
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=93.91 E-value=0.06 Score=50.44 Aligned_cols=30 Identities=30% Similarity=0.419 Sum_probs=25.9
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+|||+|+|.||+.+++.|.... +++.+.+
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~G-~~V~~~d 167 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASALG-MHVIGVN 167 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHhCC-CEEEEEC
Confidence 58999999999999999998764 7877764
No 177
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=93.83 E-value=0.14 Score=47.12 Aligned_cols=32 Identities=31% Similarity=0.482 Sum_probs=24.9
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
..|||++|.|++|..+++.|.++. ++++. .|+
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G-~~V~v-~dr 36 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAG-YELVV-WNR 36 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTT-CEEEE-C--
T ss_pred CCcEEEEecHHHHHHHHHHHHHCC-CeEEE-EeC
Confidence 458999999999999999999876 56544 344
No 178
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=93.81 E-value=0.23 Score=48.63 Aligned_cols=103 Identities=16% Similarity=0.239 Sum_probs=65.2
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCC--------CChhhhhhhccccccc-CcccCceeeecCCcceEECCE
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPF--------ISTDYMTYMFKYDSVH-GQWKHNELKVKDEKTLLFGEK 77 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~--------~~~~~~a~ll~~ds~~-g~~~~~~v~~~~~~~l~i~g~ 77 (341)
.||+|-|+|.+|..+++.|.+.. ..+++|.|.+ .+.+.+..|+.+-... |... . ..+ .+ .+
T Consensus 253 ~~vaVqG~GnVG~~~a~~L~~~G-akvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~-~---~~~--~~--~~- 322 (470)
T 2bma_A 253 QTAVVSGSGNVALYCVQKLLHLN-VKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIK-E---YLN--HS--ST- 322 (470)
T ss_dssp CEEEEECSSHHHHHHHHHHHHTT-CEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGG-G---GGG--TC--SS-
T ss_pred CEEEEECCcHHHHHHHHHHHHCC-CEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHH-H---HHh--hc--CC-
Confidence 68999999999999999998875 8999998852 2333444444432221 2221 0 000 00 01
Q ss_pred EEEEEecCCCCCCCccCCCccEEEecC-CCccCHHHHHHHHhCCCcEEE
Q 019445 78 PVAVFGFRNPEEIPWAKTGAEYVVEST-GVFTDKDKAAAHLKGGAKKVV 125 (341)
Q Consensus 78 ~i~v~~~~~~~~~~w~~~~~DvV~~at-~~~~s~~~~~~~l~~G~k~V~ 125 (341)
.... +++++ | ..++||.+-|. +...+.+.++.+++.+||.|+
T Consensus 323 -a~~v---~~~~~-~-~~~~DI~iPcA~~~~I~~~na~~l~~~~ak~V~ 365 (470)
T 2bma_A 323 -AKYF---PNEKP-W-GVPCTLAFPCATQNDVDLDQAKLLQKNGCILVG 365 (470)
T ss_dssp -CEEC---SSCCT-T-SSCCSEEEECSSTTCBCSHHHHHHHHTTCCEEE
T ss_pred -cEEe---cCcCe-e-ecCccEEEeccccCcCCHHHHHHHHhcCcEEEE
Confidence 1111 22333 7 46899999976 456678899998888998665
No 179
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=93.81 E-value=0.092 Score=49.01 Aligned_cols=36 Identities=36% Similarity=0.427 Sum_probs=27.8
Q ss_pred CCCCCceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 1 MAGDKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 1 ~~~~~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
|+. ++||+|+|+|.+|..+..+|...+.++ +.+.|.
T Consensus 1 m~~--~~kI~VIGaG~vG~~ia~~la~~g~~~-v~L~Di 36 (322)
T 1t2d_A 1 MAP--KAKIVLVGSGMIGGVMATLIVQKNLGD-VVLFDI 36 (322)
T ss_dssp -CC--CCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECS
T ss_pred CCC--CCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEeC
Confidence 554 359999999999999999998876557 566665
No 180
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=93.78 E-value=0.17 Score=49.97 Aligned_cols=32 Identities=22% Similarity=0.305 Sum_probs=26.5
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCc-EEEEee
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDV-ELVAVN 37 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~-elv~i~ 37 (341)
++||+|+|+|++|..+...|.++|.. +++.+.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D 50 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQ 50 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEE
Confidence 46999999999999999999988445 776653
No 181
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=93.77 E-value=0.44 Score=43.80 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=27.2
Q ss_pred CCceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 4 DKKIKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 4 ~~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
+.+++|.|.|+ |++|+.+++.|.+.. .+++++..
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 59 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDG-HEVTVVDN 59 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCC-CEEEEEeC
Confidence 34578999999 999999999999875 57777653
No 182
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=93.72 E-value=0.051 Score=49.91 Aligned_cols=30 Identities=30% Similarity=0.428 Sum_probs=23.6
Q ss_pred ceeEEEEc-cCHHHHHHHHHHHcCCCcEEEEe
Q 019445 6 KIKIGING-FGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 6 ~irV~I~G-~G~iG~~llr~l~~~p~~elv~i 36 (341)
+.||+|+| +|.+|..+.+.|.+.. .++..+
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G-~~V~~~ 51 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASG-YPISIL 51 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTT-CCEEEE
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCC-CeEEEE
Confidence 35899999 8999999999998764 344433
No 183
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=93.71 E-value=0.033 Score=50.57 Aligned_cols=30 Identities=30% Similarity=0.298 Sum_probs=25.0
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~~elv~i~ 37 (341)
++|.|.|+ |.+|+.+++.|+++. .+++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 33 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKAG-NPTYALV 33 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHHT-CCEEEEE
T ss_pred cEEEEECCCchHHHHHHHHHHhCC-CcEEEEE
Confidence 58999999 999999999998865 5666654
No 184
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=93.66 E-value=0.098 Score=48.37 Aligned_cols=32 Identities=19% Similarity=0.262 Sum_probs=27.4
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
++||-|.|+ |++|+.+++.|+++. .+++++..
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 57 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLN-QVVIGLDN 57 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 479999999 999999999999876 67777754
No 185
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=93.65 E-value=0.042 Score=53.78 Aligned_cols=96 Identities=7% Similarity=0.029 Sum_probs=51.0
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEecC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 85 (341)
+.+|.|+|+|.+|+.+++.|.+.. .+++ +.++ +.+....+. ..++... . + .....
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G-~~V~-v~~R--~~~~a~~la---~~~~~~~----------~-------~-~~Dv~ 57 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSG-IKVT-VACR--TLESAKKLS---AGVQHST----------P-------I-SLDVN 57 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTT-CEEE-EEES--SHHHHHHTT---TTCTTEE----------E-------E-ECCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCc-CEEE-EEEC--CHHHHHHHH---HhcCCce----------E-------E-EeecC
Confidence 468999999999999999999765 6754 4444 121111110 0011000 0 0 00000
Q ss_pred CCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEe
Q 019445 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVI 126 (341)
Q Consensus 86 ~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~l 126 (341)
+++.+.-...++|+|+.|+|.+...+.....++.|...++.
T Consensus 58 d~~~l~~~l~~~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~ 98 (450)
T 1ff9_A 58 DDAALDAEVAKHDLVISLIPYTFHATVIKSAIRQKKHVVTT 98 (450)
T ss_dssp CHHHHHHHHTTSSEEEECCC--CHHHHHHHHHHHTCEEEES
T ss_pred CHHHHHHHHcCCcEEEECCccccchHHHHHHHhCCCeEEEe
Confidence 11111000137899999999876666666677777755544
No 186
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.56 E-value=0.2 Score=43.35 Aligned_cols=28 Identities=21% Similarity=0.286 Sum_probs=22.4
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEE
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELV 34 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv 34 (341)
++||+|+|+|.+|..+.+.|.+.. .++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g-~~V~ 46 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAG-HEVT 46 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT-CEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEE
Confidence 468999999999999999987764 3443
No 187
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=93.54 E-value=0.077 Score=48.64 Aligned_cols=30 Identities=23% Similarity=0.339 Sum_probs=25.2
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+|+|+|+|.+|+.+++.+.... +++...+
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~d 185 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALG-AKVKVGA 185 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC-CEEEEEE
Confidence 58999999999999999998775 5765554
No 188
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=93.37 E-value=0.18 Score=46.46 Aligned_cols=33 Identities=36% Similarity=0.509 Sum_probs=24.8
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
|||+|+|+|.||..+.-+|..++.+.=+.+.|.
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di 33 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDI 33 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 489999999999999888877665533344454
No 189
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.25 E-value=0.04 Score=47.98 Aligned_cols=30 Identities=30% Similarity=0.335 Sum_probs=25.1
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
|||.|+|+|++|+.+++.|.+.. .+++.+.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g-~~v~vid 30 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRK-YGVVIIN 30 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CeEEEEE
Confidence 37999999999999999998764 5676665
No 190
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=93.19 E-value=0.1 Score=47.03 Aligned_cols=30 Identities=37% Similarity=0.498 Sum_probs=24.5
Q ss_pred eEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 8 KIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 8 rV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
||+|+|+|.+|..+++.|.+.. .+++.+ ++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g-~~V~~~-~~ 31 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRG-HYLIGV-SR 31 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS
T ss_pred EEEEEcCcHHHHHHHHHHHHCC-CEEEEE-EC
Confidence 8999999999999999998765 465554 44
No 191
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=93.03 E-value=0.091 Score=49.07 Aligned_cols=25 Identities=24% Similarity=0.283 Sum_probs=20.9
Q ss_pred CCceeEEEEccCHHHHHHHHHHHcC
Q 019445 4 DKKIKIGINGFGRIGRLVARVALQR 28 (341)
Q Consensus 4 ~~~irV~I~G~G~iG~~llr~l~~~ 28 (341)
|+++||+|+|+|.+|..+.+.|.+.
T Consensus 6 m~~mkI~iIG~G~mG~~~a~~l~~~ 30 (354)
T 1x0v_A 6 MASKKVCIVGSGNWGSAIAKIVGGN 30 (354)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhc
Confidence 3457999999999999999988764
No 192
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=93.02 E-value=0.28 Score=45.60 Aligned_cols=32 Identities=28% Similarity=0.459 Sum_probs=24.8
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCc-EEEEeeCC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDV-ELVAVNDP 39 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~-elv~i~~~ 39 (341)
|||+|+|+|.+|..++..|..++-+ +| .+.|.
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el-~l~D~ 33 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEV-VMVDI 33 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEE-EEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEE-EEEeC
Confidence 3899999999999999988877644 44 44454
No 193
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=92.96 E-value=0.36 Score=44.90 Aligned_cols=34 Identities=24% Similarity=0.193 Sum_probs=25.5
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
++||+|+|+|.+|..++-.|...+.+.-+.+.|.
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di 38 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDV 38 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 4699999999999999888887664433344454
No 194
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=92.88 E-value=0.33 Score=43.49 Aligned_cols=29 Identities=24% Similarity=0.303 Sum_probs=23.9
Q ss_pred eEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 8 KIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 8 rV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
||+|+|+|.+|..+.+.|.+.. .++..++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~ 30 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQG-HEVQGWL 30 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred eEEEECcCHHHHHHHHHHHhCC-CCEEEEE
Confidence 8999999999999999998765 4665553
No 195
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=92.87 E-value=0.35 Score=41.93 Aligned_cols=31 Identities=19% Similarity=0.324 Sum_probs=26.0
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCCc-EEEEee
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDDV-ELVAVN 37 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~~-elv~i~ 37 (341)
++|-|.|+ |.+|+.+++.|.++..+ +++.+.
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~ 51 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQGLFSKVTLIG 51 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEE
Confidence 58999999 99999999999988743 666664
No 196
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=92.74 E-value=0.38 Score=45.09 Aligned_cols=33 Identities=30% Similarity=0.276 Sum_probs=25.4
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCc-EEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDV-ELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~-elv~i~~~ 39 (341)
..||+|+|+|.+|..++..+...+-+ |+ .+.|.
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev-~L~Di 54 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEV-ALVDV 54 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEE-EEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeE-EEEEC
Confidence 36999999999999999988877643 44 44454
No 197
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.73 E-value=0.32 Score=44.74 Aligned_cols=30 Identities=33% Similarity=0.389 Sum_probs=24.0
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
++||+|+|+|.+|..+...|. .. .++..+.
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g-~~V~~~~ 31 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LY-HDVTVVT 31 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TT-SEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHh-cC-CceEEEE
Confidence 469999999999999999888 43 5665554
No 198
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=92.71 E-value=0.5 Score=43.48 Aligned_cols=32 Identities=34% Similarity=0.526 Sum_probs=24.5
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCc-EEEEeeCC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDV-ELVAVNDP 39 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~-elv~i~~~ 39 (341)
+||+|+|+|.+|..++..|...+.+ +++ +.|.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~-L~D~ 33 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELV-LVDR 33 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEE-EECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEE-EEeC
Confidence 3899999999999999988877533 444 4454
No 199
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=92.66 E-value=0.046 Score=51.34 Aligned_cols=31 Identities=26% Similarity=0.307 Sum_probs=24.7
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
+||+|+|+|.+|+.+++.|.... ++++ +.++
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G-~~V~-~~~~ 47 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSG-VDVT-VGLR 47 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT-CCEE-EECC
T ss_pred CEEEEECchHHHHHHHHHHHHCc-CEEE-EEEC
Confidence 58999999999999999998765 5654 3443
No 200
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=92.58 E-value=0.32 Score=44.74 Aligned_cols=32 Identities=34% Similarity=0.467 Sum_probs=24.0
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCC-cEEEEeeCC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDD-VELVAVNDP 39 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~-~elv~i~~~ 39 (341)
+||+|+|+|.+|..++..|.+..- -+++ +.|.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~-l~d~ 34 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYV-FIDA 34 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEE-EECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEE-EEcC
Confidence 489999999999999998877641 2444 4344
No 201
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=92.42 E-value=0.12 Score=48.27 Aligned_cols=30 Identities=23% Similarity=0.356 Sum_probs=25.7
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+|||+|+|.||+.+++.|.... +++.+.+
T Consensus 141 ~tvGIIGlG~IG~~vA~~l~~~G-~~V~~~d 170 (324)
T 3hg7_A 141 RTLLILGTGSIGQHIAHTGKHFG-MKVLGVS 170 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred ceEEEEEECHHHHHHHHHHHhCC-CEEEEEc
Confidence 58999999999999999998775 7776664
No 202
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=92.37 E-value=0.099 Score=48.02 Aligned_cols=30 Identities=20% Similarity=0.316 Sum_probs=25.3
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+|+|+|+|.+|+.+++.+.... +++...+
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~d 187 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALG-ANVKVGA 187 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEEcccHHHHHHHHHHHHCC-CEEEEEE
Confidence 58999999999999999998775 5766554
No 203
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=92.33 E-value=0.47 Score=43.50 Aligned_cols=31 Identities=32% Similarity=0.398 Sum_probs=24.5
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCc-EEEEe
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDV-ELVAV 36 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~-elv~i 36 (341)
++||+|+|+|.+|..+...|.....+ +++.+
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~ 38 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLE 38 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 46999999999999999988876533 55444
No 204
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=92.22 E-value=0.29 Score=46.00 Aligned_cols=32 Identities=28% Similarity=0.324 Sum_probs=27.0
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
|++|.|.|+ |++|+.+++.|+++. .+++++..
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 61 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEG-HYVIASDW 61 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCeEEEECCccHHHHHHHHHHHHCC-CeEEEEEC
Confidence 468999999 999999999998875 57777653
No 205
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=92.10 E-value=0.19 Score=46.51 Aligned_cols=31 Identities=19% Similarity=0.392 Sum_probs=24.0
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
+++||+|+|+|.+|..+...|.+.. .++..+
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G-~~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAG-HEVILI 48 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCC-CeEEEE
Confidence 3579999999999999999998764 355555
No 206
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=92.04 E-value=0.17 Score=45.18 Aligned_cols=31 Identities=26% Similarity=0.472 Sum_probs=25.7
Q ss_pred eEEEEcc-CHHHHHHHHHHHcC-CCcEEEEeeC
Q 019445 8 KIGINGF-GRIGRLVARVALQR-DDVELVAVND 38 (341)
Q Consensus 8 rV~I~G~-G~iG~~llr~l~~~-p~~elv~i~~ 38 (341)
||.|.|+ |.+|+.+++.|.++ +..+++++..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r 33 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVR 33 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEES
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEc
Confidence 5889999 99999999999986 3477777753
No 207
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=92.00 E-value=0.16 Score=40.03 Aligned_cols=31 Identities=26% Similarity=0.497 Sum_probs=25.3
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.++|+|+|+|++|+.+++.|.+.. .+++.+.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g-~~v~~~d 34 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKG-HDIVLID 34 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC-CeEEEEE
Confidence 358999999999999999998765 6766664
No 208
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=91.99 E-value=0.096 Score=46.67 Aligned_cols=31 Identities=13% Similarity=0.182 Sum_probs=23.5
Q ss_pred eEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 8 KIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 8 rV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
||+|+|+|.+|..+++.|.+....++ .+.++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v-~~~~r 32 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRI-YIANR 32 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEE-EEECS
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeE-EEECC
Confidence 89999999999999998876541344 44454
No 209
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=91.93 E-value=0.49 Score=46.12 Aligned_cols=102 Identities=15% Similarity=0.315 Sum_probs=62.2
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCC--------CChhhhhhhcccc-cccCcccCceeeecCCcceEECCE
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPF--------ISTDYMTYMFKYD-SVHGQWKHNELKVKDEKTLLFGEK 77 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~--------~~~~~~a~ll~~d-s~~g~~~~~~v~~~~~~~l~i~g~ 77 (341)
.||+|=|+|.+|..+++.|.+.. ..++++.|.. .+.+.+..+.... +..|+.. .-. .+ . |
T Consensus 236 k~vaVQG~GnVG~~aa~~L~e~G-akvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~-~~~-~~------~-g- 304 (450)
T 4fcc_A 236 MRVSVSGSGNVAQYAIEKAMEFG-ARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVA-DYA-KE------F-G- 304 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHH-HHH-HH------H-T-
T ss_pred CEEEEeCCChHHHHHHHHHHhcC-CeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccc-ccc-cc------C-C-
Confidence 68999999999999999999875 7899987652 1223333322211 1111110 000 00 0 1
Q ss_pred EEEEEecCCCCCCCccCCCccEEEec-CCCccCHHHHHHHHhCCCcEEE
Q 019445 78 PVAVFGFRNPEEIPWAKTGAEYVVES-TGVFTDKDKAAAHLKGGAKKVV 125 (341)
Q Consensus 78 ~i~v~~~~~~~~~~w~~~~~DvV~~a-t~~~~s~~~~~~~l~~G~k~V~ 125 (341)
.... +++++ |. .++||.+=| ++...+.+.++.+...|+|.|.
T Consensus 305 -~~~~---~~~~i-~~-~~~DI~iPcAl~~~I~~~~a~~L~a~g~k~Ia 347 (450)
T 4fcc_A 305 -LVYL---EGQQP-WS-VPVDIALPCATQNELDVDAAHQLIANGVKAVA 347 (450)
T ss_dssp -CEEE---ETCCG-GG-SCCSEEEECSCTTCBCHHHHHHHHHTTCCEEE
T ss_pred -cEEe---cCccc-cc-CCccEEeeccccccccHHHHHHHHhcCceEEe
Confidence 1111 23333 64 689999987 5566788999998888998664
No 210
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=91.89 E-value=0.34 Score=45.69 Aligned_cols=25 Identities=20% Similarity=0.457 Sum_probs=21.1
Q ss_pred CceeEEEEcc-CHHHHHHHHHHHcCC
Q 019445 5 KKIKIGINGF-GRIGRLVARVALQRD 29 (341)
Q Consensus 5 ~~irV~I~G~-G~iG~~llr~l~~~p 29 (341)
..+||+|+|| |.||..|+-+|.+.+
T Consensus 23 ~~vKVaViGAaG~IG~~la~~la~~~ 48 (345)
T 4h7p_A 23 SAVKVAVTGAAGQIGYALVPLIARGA 48 (345)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHTT
T ss_pred CCCEEEEECcCcHHHHHHHHHHHhcc
Confidence 4589999999 999999988777654
No 211
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=91.87 E-value=0.13 Score=48.62 Aligned_cols=23 Identities=26% Similarity=0.365 Sum_probs=20.1
Q ss_pred ceeEEEEccCHHHHHHHHHHHcC
Q 019445 6 KIKIGINGFGRIGRLVARVALQR 28 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~ 28 (341)
|+||+|+|+|.+|..+.+.|.+.
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~ 43 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTN 43 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHc
Confidence 46999999999999999988653
No 212
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=91.71 E-value=0.23 Score=45.99 Aligned_cols=87 Identities=24% Similarity=0.186 Sum_probs=58.1
Q ss_pred ceeEEEE-cc-CHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEe
Q 019445 6 KIKIGIN-GF-GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG 83 (341)
Q Consensus 6 ~irV~I~-G~-G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 83 (341)
+.+++|+ |+ |..|+.+++.+.++. +++++..++...++ . +.| ++++.
T Consensus 13 ~~siaVV~Gasg~~G~~~~~~l~~~G-~~~v~~VnP~~~g~--------------------------~--i~G--~~vy~ 61 (305)
T 2fp4_A 13 KNTKVICQGFTGKQGTFHSQQALEYG-TNLVGGTTPGKGGK--------------------------T--HLG--LPVFN 61 (305)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHT-CEEEEEECTTCTTC--------------------------E--ETT--EEEES
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHCC-CcEEEEeCCCcCcc--------------------------e--ECC--eeeec
Confidence 3568888 99 999999999988875 67664433411100 0 112 23332
Q ss_pred cCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEe
Q 019445 84 FRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVI 126 (341)
Q Consensus 84 ~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~l 126 (341)
+.++++- ..++|+++.++|.....+.+.+++++|+|.+++
T Consensus 62 --sl~el~~-~~~vD~avI~vP~~~~~~~~~e~i~~Gi~~iv~ 101 (305)
T 2fp4_A 62 --TVKEAKE-QTGATASVIYVPPPFAAAAINEAIDAEVPLVVC 101 (305)
T ss_dssp --SHHHHHH-HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred --hHHHhhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 2233320 126899999999999999999999999998553
No 213
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.44 E-value=0.19 Score=40.46 Aligned_cols=33 Identities=27% Similarity=0.476 Sum_probs=27.1
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
++.+|.|+|+|++|+.+++.|.++. .+++.+..
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g-~~v~vid~ 38 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASD-IPLVVIET 38 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC-CCEEEEEC
Confidence 4568999999999999999998765 57777753
No 214
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=91.43 E-value=0.23 Score=47.38 Aligned_cols=32 Identities=25% Similarity=0.406 Sum_probs=26.2
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEee
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.++|-|.|+ |.||+++++.|+++...+++.+.
T Consensus 35 ~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~ 67 (399)
T 3nzo_A 35 QSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVD 67 (399)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEE
Confidence 368999999 99999999999987634666664
No 215
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=91.40 E-value=0.48 Score=44.20 Aligned_cols=34 Identities=18% Similarity=0.189 Sum_probs=25.7
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
++||+|+|+|.+|..++-.|...+.+.-+.+.|.
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di 42 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 4799999999999999888887664433344454
No 216
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=91.37 E-value=0.58 Score=45.70 Aligned_cols=86 Identities=21% Similarity=0.191 Sum_probs=61.1
Q ss_pred ceeEEEEccC----HHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEE
Q 019445 6 KIKIGINGFG----RIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAV 81 (341)
Q Consensus 6 ~irV~I~G~G----~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v 81 (341)
..+|+|+|++ +.|..+++.|.+++.-.+..||-. ++.. .| +++
T Consensus 8 p~siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVnP~------------~~~i-------------------~G--~~~ 54 (457)
T 2csu_A 8 PKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIK------------EEEV-------------------QG--VKA 54 (457)
T ss_dssp CSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSS------------CSEE-------------------TT--EEC
T ss_pred CCeEEEECcCCCCCchHHHHHHHHHHcCCCEEEEECCC------------CCeE-------------------CC--Eec
Confidence 5689999994 789999999988754677777632 0111 12 223
Q ss_pred EecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEE-ecCC
Q 019445 82 FGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVV-ISAP 129 (341)
Q Consensus 82 ~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~-lSa~ 129 (341)
+. +.++++ ..+|+++.++|.....+.+.++.++|+|.++ ++.-
T Consensus 55 y~--sl~~lp---~~~Dlavi~vp~~~~~~~v~e~~~~Gi~~vv~~s~G 98 (457)
T 2csu_A 55 YK--SVKDIP---DEIDLAIIVVPKRFVKDTLIQCGEKGVKGVVIITAG 98 (457)
T ss_dssp BS--STTSCS---SCCSEEEECSCHHHHHHHHHHHHHHTCCEEEECCCS
T ss_pred cC--CHHHcC---CCCCEEEEecCHHHHHHHHHHHHHcCCCEEEEecCC
Confidence 32 344453 3689999999999999999999999999655 5543
No 217
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=91.35 E-value=0.11 Score=47.92 Aligned_cols=31 Identities=16% Similarity=0.278 Sum_probs=23.2
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
++||+|+|+|.+|..+...|.+.. .++..+.
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g-~~V~~~~ 32 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRSG-EDVHFLL 32 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHTS-CCEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC-CeEEEEE
Confidence 369999999999999999888754 3554443
No 218
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=91.32 E-value=0.22 Score=44.46 Aligned_cols=31 Identities=26% Similarity=0.546 Sum_probs=26.0
Q ss_pred eEEEEcc-CHHHHHHHHHHHcC-CCcEEEEeeC
Q 019445 8 KIGINGF-GRIGRLVARVALQR-DDVELVAVND 38 (341)
Q Consensus 8 rV~I~G~-G~iG~~llr~l~~~-p~~elv~i~~ 38 (341)
+|.|.|+ |++|+.+++.|.++ +..+++++..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r 34 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVR 34 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEES
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEc
Confidence 6899999 99999999999887 4477777753
No 219
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=91.32 E-value=0.72 Score=42.46 Aligned_cols=30 Identities=30% Similarity=0.416 Sum_probs=23.3
Q ss_pred eeEEEEccCHHHHHHHHHHHcCC-CcEEEEe
Q 019445 7 IKIGINGFGRIGRLVARVALQRD-DVELVAV 36 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p-~~elv~i 36 (341)
+||+|+|+|++|..++..|...+ ..+++.+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~ 31 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLL 31 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 38999999999999999888753 3455444
No 220
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=91.30 E-value=0.42 Score=46.59 Aligned_cols=103 Identities=13% Similarity=0.253 Sum_probs=61.6
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCC--------CChhhhhhhccccccc-CcccCceeeecCCcceEECCE
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPF--------ISTDYMTYMFKYDSVH-GQWKHNELKVKDEKTLLFGEK 77 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~--------~~~~~~a~ll~~ds~~-g~~~~~~v~~~~~~~l~i~g~ 77 (341)
.||+|-|+|.+|..+++.|.+.. ..+++|.|.+ .|.+.+..+..+.... ++.. .-+ . . ..+
T Consensus 240 ~~VaVQG~GnVG~~aa~~L~e~G-akvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~-~~~---~--~--~~~- 309 (456)
T 3r3j_A 240 KKCLVSGSGNVAQYLVEKLIEKG-AIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLK-EYL---K--Y--SKT- 309 (456)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT-CCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGG-GGG---G--T--CSS-
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchh-hhh---h--c--CCC-
Confidence 68999999999999999998764 6788888752 1223332222121111 1111 000 0 0 001
Q ss_pred EEEEEecCCCCCCCccCCCccEEEec-CCCccCHHHHHHHHhCCCcEEE
Q 019445 78 PVAVFGFRNPEEIPWAKTGAEYVVES-TGVFTDKDKAAAHLKGGAKKVV 125 (341)
Q Consensus 78 ~i~v~~~~~~~~~~w~~~~~DvV~~a-t~~~~s~~~~~~~l~~G~k~V~ 125 (341)
.... +++++ |. .++|+.+-| ++...+.+.++.+++.+||.|.
T Consensus 310 -a~~v---~~~~i-~~-~~~DI~iPcA~~~~I~~~na~~l~~~~ak~V~ 352 (456)
T 3r3j_A 310 -AKYF---ENQKP-WN-IPCDIAFPCATQNEINENDADLFIQNKCKMIV 352 (456)
T ss_dssp -CEEE---CSCCG-GG-SCCSEEEECSCTTCBCHHHHHHHHHHTCCEEE
T ss_pred -ceEe---CCccc-cc-cCccEEEeCCCccchhhHHHHHHHhcCCeEEE
Confidence 0111 23343 64 589999987 5667788999988877888665
No 221
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=91.20 E-value=0.68 Score=42.83 Aligned_cols=32 Identities=41% Similarity=0.559 Sum_probs=23.8
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCc-EEEEeeCC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDV-ELVAVNDP 39 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~-elv~i~~~ 39 (341)
+||+|+|+|.+|..++..|...... +++. .|.
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l-~D~ 33 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVL-IDV 33 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEE-ECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEE-EeC
Confidence 3899999999999999988765422 4444 444
No 222
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=91.17 E-value=1.1 Score=40.68 Aligned_cols=32 Identities=13% Similarity=0.147 Sum_probs=26.5
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
.++|-|.|+ |+||+.+++.|+++. .+++.+..
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r 43 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLEHG-YKVRGTAR 43 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCEEEEECCccHHHHHHHHHHHHCC-CEEEEEeC
Confidence 368999999 999999999999875 57766643
No 223
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=91.13 E-value=0.16 Score=47.42 Aligned_cols=37 Identities=24% Similarity=0.168 Sum_probs=25.2
Q ss_pred CCCCCceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 1 MAGDKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 1 ~~~~~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
|+.|.+.||||+|+|.+|..++..+.++. ++++. .|+
T Consensus 1 m~~~~~~kI~vIGaG~MG~~iA~~la~~G-~~V~l-~d~ 37 (319)
T 2dpo_A 1 MASPAAGDVLIVGSGLVGRSWAMLFASGG-FRVKL-YDI 37 (319)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHTT-CCEEE-ECS
T ss_pred CCCCCCceEEEEeeCHHHHHHHHHHHHCC-CEEEE-EeC
Confidence 77776789999999999999999998775 45544 454
No 224
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=91.11 E-value=0.2 Score=48.62 Aligned_cols=33 Identities=21% Similarity=0.414 Sum_probs=29.9
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPF 40 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~ 40 (341)
.||+|.|+|.+|+.+++.|.+.. ..+++|.|.+
T Consensus 213 ~~vaVqG~GnVG~~~a~~L~~~G-akvVavsD~~ 245 (421)
T 2yfq_A 213 AKIAVQGFGNVGTFTVKNIERQG-GKVCAIAEWD 245 (421)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT-CCEEECCBCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEEEecC
Confidence 68999999999999999998875 8999999874
No 225
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=91.06 E-value=0.18 Score=45.79 Aligned_cols=31 Identities=23% Similarity=0.385 Sum_probs=24.3
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
+|+||+|+|+|.+|..+.+.|.+.. .++..+
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~ 32 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGSRLGIMLHQGG-NDVTLI 32 (316)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCCeEEEECcCHHHHHHHHHHHhCC-CcEEEE
Confidence 3469999999999999999998765 465554
No 226
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.05 E-value=0.24 Score=43.80 Aligned_cols=29 Identities=21% Similarity=0.175 Sum_probs=24.0
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
.+|-|+|+|.+|...++.|++.. .+++-|
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~G-A~VtVv 60 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEG-AAITVV 60 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGC-CCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEE
Confidence 68999999999999999999875 455444
No 227
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=91.01 E-value=0.36 Score=49.12 Aligned_cols=34 Identities=24% Similarity=0.401 Sum_probs=28.2
Q ss_pred CceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 5 KKIKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 5 ~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
++++|-|.|+ |++|+.+++.|.+++..+++++..
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r 348 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI 348 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEES
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEc
Confidence 4578999999 999999999999874468777753
No 228
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=90.97 E-value=1.2 Score=40.48 Aligned_cols=30 Identities=17% Similarity=0.165 Sum_probs=25.1
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.|+.|+|+|-+|+.+++.|.+.. .+|.-+|
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G-~~v~V~n 148 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQG-LQVSVLN 148 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 48999999999999999999877 6665554
No 229
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=90.96 E-value=1.1 Score=42.79 Aligned_cols=33 Identities=9% Similarity=0.027 Sum_probs=27.0
Q ss_pred CceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 5 KKIKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 5 ~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
.+++|-|.|+ |.||+.+++.|.+.+ .+|+++.-
T Consensus 68 ~~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~R 101 (427)
T 4f6c_A 68 PLGNTLLTGATGFLGAYLIEALQGYS-HRIYCFIR 101 (427)
T ss_dssp CCEEEEEECTTSHHHHHHHHHHTTTE-EEEEEEEE
T ss_pred CCCEEEEecCCcHHHHHHHHHHHcCC-CEEEEEEC
Confidence 3578999999 999999999997664 67777654
No 230
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=90.81 E-value=0.54 Score=45.85 Aligned_cols=102 Identities=16% Similarity=0.297 Sum_probs=63.9
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCC--------C-Chhhhhhhccccccc-CcccCceeeecCCcceEECC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPF--------I-STDYMTYMFKYDSVH-GQWKHNELKVKDEKTLLFGE 76 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~--------~-~~~~~a~ll~~ds~~-g~~~~~~v~~~~~~~l~i~g 76 (341)
.+|+|-|+|-+|..+++.|.+.. ..+++|.|.+ . +.+.+..++.+-... +.+. . ..+ .+ +.
T Consensus 231 ~~v~VqG~GnVG~~~a~~L~~~G-akvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~-~---y~~--~~--~a 301 (449)
T 1bgv_A 231 KTVALAGFGNVAWGAAKKLAELG-AKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQ-D---YAD--KF--GV 301 (449)
T ss_dssp CEEEECCSSHHHHHHHHHHHHHT-CEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTH-H---HHH--HH--TC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChh-h---ccc--cc--CC
Confidence 68999999999999999998774 8999998852 1 222333444332221 2222 0 000 00 11
Q ss_pred EEEEEEecCCCCCCCccCCCccEEEecC-CCccCHHHHHHHHhCCCcEEE
Q 019445 77 KPVAVFGFRNPEEIPWAKTGAEYVVEST-GVFTDKDKAAAHLKGGAKKVV 125 (341)
Q Consensus 77 ~~i~v~~~~~~~~~~w~~~~~DvV~~at-~~~~s~~~~~~~l~~G~k~V~ 125 (341)
+.+ +++++ |. .++|+.+-|. +...+.+.++.+...|||.|.
T Consensus 302 ~~i------~~~e~-~~-~~~Dil~P~A~~~~I~~~na~~l~a~g~kiV~ 343 (449)
T 1bgv_A 302 QFF------PGEKP-WG-QKVDIIMPCATQNDVDLEQAKKIVANNVKYYI 343 (449)
T ss_dssp EEE------ETCCG-GG-SCCSEEECCSCTTCBCHHHHHHHHHTTCCEEE
T ss_pred EEe------Cchhh-hc-CCcceeeccccccccchhhHHHHHhcCCeEEE
Confidence 111 12333 74 6899999876 466788999998888998665
No 231
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.53 E-value=0.22 Score=40.60 Aligned_cols=33 Identities=12% Similarity=0.095 Sum_probs=26.5
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
...+|.|+|+|++|+.+++.|.+.. .+++.|..
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g-~~V~vid~ 34 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRG-QNVTVISN 34 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTT-CCEEEEEC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCC-CCEEEEEC
Confidence 3458999999999999999998764 56666643
No 232
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=90.50 E-value=0.34 Score=44.13 Aligned_cols=23 Identities=26% Similarity=0.382 Sum_probs=19.6
Q ss_pred ceeEEEEccCHHHHHHHHHHHcC
Q 019445 6 KIKIGINGFGRIGRLVARVALQR 28 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~ 28 (341)
++||+|+|+|.+|..+...|.+.
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~ 24 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQS 24 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHH
T ss_pred CcEEEEECCCHHHHHHHHHHHHC
Confidence 36999999999999999888754
No 233
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=90.46 E-value=0.35 Score=45.00 Aligned_cols=32 Identities=22% Similarity=0.365 Sum_probs=26.0
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcC-CCcEEEEee
Q 019445 6 KIKIGINGF-GRIGRLVARVALQR-DDVELVAVN 37 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~-p~~elv~i~ 37 (341)
.++|-|.|+ |.+|+.+++.|+++ ...+|+.+.
T Consensus 21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~ 54 (344)
T 2gn4_A 21 NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYS 54 (344)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEE
Confidence 368999999 99999999999887 433776664
No 234
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=90.42 E-value=0.25 Score=46.16 Aligned_cols=33 Identities=27% Similarity=0.333 Sum_probs=25.9
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCc-EEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDV-ELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~-elv~i~~~ 39 (341)
++||+|+|+|.+|..++..|...+.+ +|+.+ |.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~-D~ 38 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVI-DV 38 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEE-CS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEE-ec
Confidence 47999999999999999998877644 55444 54
No 235
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=90.27 E-value=0.38 Score=44.84 Aligned_cols=34 Identities=32% Similarity=0.420 Sum_probs=25.8
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
.++||+|+|+|.+|..++..|..++-.+|+-+ |.
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~-Di 37 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLF-DI 37 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEE-CS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEE-eC
Confidence 34699999999999999998887763265444 44
No 236
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=90.26 E-value=0.19 Score=48.18 Aligned_cols=22 Identities=27% Similarity=0.487 Sum_probs=20.2
Q ss_pred ceeEEEEccCHHHHHHHHHHHc
Q 019445 6 KIKIGINGFGRIGRLVARVALQ 27 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~ 27 (341)
+.||+|+|+|..|-.|..+|.+
T Consensus 34 p~KI~ViGaGsWGTALA~~la~ 55 (391)
T 4fgw_A 34 PFKVTVIGSGNWGTTIAKVVAE 55 (391)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHH
Confidence 5799999999999999999875
No 237
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=90.18 E-value=0.21 Score=45.32 Aligned_cols=32 Identities=28% Similarity=0.566 Sum_probs=25.3
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
++||+|+|+|.+|+.+++.|.++. .++ .+.++
T Consensus 5 ~m~i~iiG~G~~G~~~a~~l~~~g-~~V-~~~~~ 36 (299)
T 1vpd_A 5 TMKVGFIGLGIMGKPMSKNLLKAG-YSL-VVSDR 36 (299)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTT-CEE-EEECS
T ss_pred cceEEEECchHHHHHHHHHHHhCC-CEE-EEEeC
Confidence 469999999999999999998875 565 44454
No 238
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=90.13 E-value=0.42 Score=44.46 Aligned_cols=86 Identities=15% Similarity=0.323 Sum_probs=51.8
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEecCC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRN 86 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 86 (341)
-+|.|+|+|-+|...++++.... .+++++... .... ..+.+ .|. . . ++ .+
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~-~~~~--~~~~~----lGa------------~-----~---v~--~~ 227 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMG-AEVSVFARN-EHKK--QDALS----MGV------------K-----H---FY--TD 227 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT-CEEEEECSS-STTH--HHHHH----TTC------------S-----E---EE--SS
T ss_pred CEEEEECCcHHHHHHHHHHHHCC-CeEEEEeCC-HHHH--HHHHh----cCC------------C-----e---ec--CC
Confidence 37999999999999999887765 587776533 2211 11111 110 0 0 11 12
Q ss_pred CCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEE
Q 019445 87 PEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVV 125 (341)
Q Consensus 87 ~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~ 125 (341)
++.+ ..++|+||+|++...+.+.+-..++.|-+.+.
T Consensus 228 ~~~~---~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~ 263 (348)
T 3two_A 228 PKQC---KEELDFIISTIPTHYDLKDYLKLLTYNGDLAL 263 (348)
T ss_dssp GGGC---CSCEEEEEECCCSCCCHHHHHTTEEEEEEEEE
T ss_pred HHHH---hcCCCEEEECCCcHHHHHHHHHHHhcCCEEEE
Confidence 3322 23899999999988676666666655554444
No 239
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=90.13 E-value=0.27 Score=43.70 Aligned_cols=32 Identities=25% Similarity=0.439 Sum_probs=25.8
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
|+||+|+|+|.+|+.+++.|.+.+ .+ +.+.++
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g-~~-v~~~~~ 34 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTP-HE-LIISGS 34 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSS-CE-EEEECS
T ss_pred ccEEEEECCCHHHHHHHHHHHhCC-Ce-EEEECC
Confidence 359999999999999999998876 34 456565
No 240
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=90.01 E-value=0.24 Score=42.06 Aligned_cols=36 Identities=17% Similarity=0.261 Sum_probs=27.1
Q ss_pred CCCCCceeEEEEcc-CHHHHHHHHHHHcCCCc-EEEEee
Q 019445 1 MAGDKKIKIGINGF-GRIGRLVARVALQRDDV-ELVAVN 37 (341)
Q Consensus 1 ~~~~~~irV~I~G~-G~iG~~llr~l~~~p~~-elv~i~ 37 (341)
|.. |+++|.|.|+ |.+|+.+++.|.+++.+ +++.+.
T Consensus 1 M~~-~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~ 38 (215)
T 2a35_A 1 MHS-TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPA 38 (215)
T ss_dssp ----CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCB
T ss_pred CCC-CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEe
Confidence 543 3468999999 99999999999998753 666654
No 241
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=89.99 E-value=0.19 Score=49.69 Aligned_cols=29 Identities=21% Similarity=0.347 Sum_probs=24.3
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
.+|+|+|+|.||+.+++.+.... ++++.+
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~G-a~Viv~ 303 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQG-ARVSVT 303 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEEE
Confidence 58999999999999999998775 566544
No 242
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=89.86 E-value=0.35 Score=45.12 Aligned_cols=34 Identities=29% Similarity=0.306 Sum_probs=25.6
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
.++||+|+|+|.+|..++..|..++..+|+- .|.
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L-~Di 39 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKELGDVVL-FDI 39 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEE-ECS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCCeEEE-EeC
Confidence 4579999999999999998888765226544 344
No 243
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=89.65 E-value=0.27 Score=45.16 Aligned_cols=36 Identities=22% Similarity=0.279 Sum_probs=27.1
Q ss_pred CCCCCceeEEEEcc-CHHHHHHHHHHHcCC-CcEEEEeeC
Q 019445 1 MAGDKKIKIGINGF-GRIGRLVARVALQRD-DVELVAVND 38 (341)
Q Consensus 1 ~~~~~~irV~I~G~-G~iG~~llr~l~~~p-~~elv~i~~ 38 (341)
|+.| ++|-|.|+ |++|+.+++.|.++. ..+++.+..
T Consensus 1 Ms~m--~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r 38 (348)
T 1oc2_A 1 MSQF--KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDK 38 (348)
T ss_dssp --CC--SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred CCcC--cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 6653 48999999 999999999998762 467777643
No 244
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=89.63 E-value=0.22 Score=48.83 Aligned_cols=31 Identities=23% Similarity=0.239 Sum_probs=25.1
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCC-CcEEEEe
Q 019445 6 KIKIGINGFGRIGRLVARVALQRD-DVELVAV 36 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p-~~elv~i 36 (341)
|+||+|+|+|++|..+.+.|.++. ..+++.+
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~ 36 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVV 36 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEE
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEE
Confidence 359999999999999999988762 4676655
No 245
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=89.61 E-value=0.26 Score=44.60 Aligned_cols=33 Identities=33% Similarity=0.403 Sum_probs=27.1
Q ss_pred CceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 5 KKIKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 5 ~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
+++||.|.|+ |++|+.+++.|.++. .+++++..
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 39 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASG-EEVTVLDD 39 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-CCEEEECC
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCC-CEEEEEec
Confidence 4579999999 999999999999886 57766643
No 246
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=89.55 E-value=0.21 Score=44.36 Aligned_cols=26 Identities=27% Similarity=0.521 Sum_probs=21.9
Q ss_pred CCceeEEEEccCHHHHHHHHHHHcCC
Q 019445 4 DKKIKIGINGFGRIGRLVARVALQRD 29 (341)
Q Consensus 4 ~~~irV~I~G~G~iG~~llr~l~~~p 29 (341)
|+++||+|+|+|.+|..+.+.|.+..
T Consensus 2 m~~m~i~iiG~G~mG~~~a~~l~~~g 27 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGSALAHGIANAN 27 (262)
T ss_dssp CSSSCEEEECCSHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCC
Confidence 34569999999999999999987654
No 247
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=89.48 E-value=0.22 Score=45.56 Aligned_cols=32 Identities=22% Similarity=0.346 Sum_probs=25.7
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
++||+|+|+|++|..+.+.|.++. .++... ++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G-~~V~~~-dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWP-GGVTVY-DI 46 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTST-TCEEEE-CS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCC-CeEEEE-eC
Confidence 469999999999999999998875 565444 44
No 248
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=89.44 E-value=0.81 Score=42.02 Aligned_cols=29 Identities=28% Similarity=0.344 Sum_probs=24.3
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.||||+|+|.+|..+++.+. .. ++++..+
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-aG-~~V~v~d 41 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-SK-HEVVLQD 41 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TT-SEEEEEC
T ss_pred CeEEEEeeCHHHHHHHHHHH-cC-CEEEEEE
Confidence 68999999999999999999 64 6765553
No 249
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=89.44 E-value=0.27 Score=45.24 Aligned_cols=34 Identities=21% Similarity=0.291 Sum_probs=28.0
Q ss_pred CceeEEEEcc-CHHHHHHHHHHHcCC-CcEEEEeeC
Q 019445 5 KKIKIGINGF-GRIGRLVARVALQRD-DVELVAVND 38 (341)
Q Consensus 5 ~~irV~I~G~-G~iG~~llr~l~~~p-~~elv~i~~ 38 (341)
+++||-|.|+ |++|+.+++.|+++. .++++++..
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~ 58 (346)
T 4egb_A 23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDA 58 (346)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEec
Confidence 4579999999 999999999998763 578877764
No 250
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=89.37 E-value=0.29 Score=44.40 Aligned_cols=35 Identities=34% Similarity=0.487 Sum_probs=25.5
Q ss_pred CCCCCceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 1 MAGDKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 1 ~~~~~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
|++ ++||+|+|+|.+|+.+++.|.+.. .++. +.++
T Consensus 1 M~~--~~~i~iiG~G~~G~~~a~~l~~~g-~~V~-~~~~ 35 (301)
T 3cky_A 1 MEK--SIKIGFIGLGAMGKPMAINLLKEG-VTVY-AFDL 35 (301)
T ss_dssp -----CCEEEEECCCTTHHHHHHHHHHTT-CEEE-EECS
T ss_pred CCC--CCEEEEECccHHHHHHHHHHHHCC-CeEE-EEeC
Confidence 554 359999999999999999998765 5655 4444
No 251
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=89.36 E-value=0.26 Score=44.07 Aligned_cols=33 Identities=15% Similarity=0.335 Sum_probs=27.3
Q ss_pred CceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 5 KKIKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 5 ~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
|++||-|.|+ |++|+.+++.|.++. .+++++..
T Consensus 4 M~m~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 37 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQLQEELNPEE-YDIYPFDK 37 (287)
T ss_dssp -CEEEEEESTTSHHHHHHHHHSCTTT-EEEEEECT
T ss_pred ceeEEEEECCCCHHHHHHHHHHHhCC-CEEEEecc
Confidence 4469999999 999999999999885 67777753
No 252
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=89.29 E-value=1.5 Score=40.47 Aligned_cols=33 Identities=27% Similarity=0.295 Sum_probs=24.3
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
+||+|+|+|.+|..++-.|..++-+.-+.+.|.
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di 33 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDL 33 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 389999999999999888877653333344454
No 253
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=88.87 E-value=0.39 Score=44.12 Aligned_cols=33 Identities=15% Similarity=0.399 Sum_probs=26.5
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
.|+||||+|+|++|..+.+.|.+.. .++... ++
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G-~~V~~~-dr 52 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNG-FKVTVW-NR 52 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS
T ss_pred cCCEEEEECccHHHHHHHHHHHHCC-CeEEEE-eC
Confidence 3579999999999999999998875 465544 44
No 254
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=88.75 E-value=0.42 Score=43.33 Aligned_cols=32 Identities=19% Similarity=0.214 Sum_probs=26.0
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
+.||+|+|+|.+|..+++.+.++. ++++.. |.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G-~~V~l~-d~ 35 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHG-FAVTAY-DI 35 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC-CeEEEE-eC
Confidence 469999999999999999998875 565544 54
No 255
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=88.73 E-value=0.4 Score=44.25 Aligned_cols=33 Identities=24% Similarity=0.284 Sum_probs=27.1
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
++||+|+|+|++|..++..|...+.++ +.+.|.
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~g~~~-v~L~Di 34 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAKELGD-IVLLDI 34 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSE-EEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCe-EEEEeC
Confidence 369999999999999999888877567 566665
No 256
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=88.60 E-value=0.49 Score=49.06 Aligned_cols=30 Identities=20% Similarity=0.245 Sum_probs=24.5
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
+.||||+|+|.+|..+...+.+.. ++++..
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~aG-~~V~l~ 341 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILSN-YPVILK 341 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTT-CCEEEE
T ss_pred CcEEEEEcCCHhhHHHHHHHHhCC-CEEEEE
Confidence 358999999999999999998875 555444
No 257
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=88.58 E-value=0.4 Score=43.47 Aligned_cols=32 Identities=19% Similarity=0.315 Sum_probs=27.0
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
++||.|.|+ |++|+.+++.|.++. .+++++..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 34 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDG-NTPIILTR 34 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeC
Confidence 368999999 999999999999886 57777653
No 258
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=88.45 E-value=0.5 Score=43.69 Aligned_cols=31 Identities=26% Similarity=0.298 Sum_probs=24.9
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
++||||+|+|++|..+++.|.++...++...
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~ 54 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAY 54 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEE
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEE
Confidence 4699999999999999999988752455444
No 259
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=88.29 E-value=0.39 Score=45.40 Aligned_cols=32 Identities=31% Similarity=0.473 Sum_probs=26.2
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
++||||+|+|++|..+++.|.++. .+++.. ++
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G-~~V~v~-dr 53 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGG-HECVVY-DL 53 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CCEEEEECchHHHHHHHHHHHhCC-CEEEEE-eC
Confidence 479999999999999999999886 565544 44
No 260
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=88.28 E-value=0.47 Score=45.10 Aligned_cols=112 Identities=18% Similarity=0.140 Sum_probs=62.0
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCC-cEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEe
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDD-VELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG 83 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~-~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 83 (341)
|.||.|.|. |-||...+..+.+||+ |+++++.......+.++...+ ...+++. -+.+.......+ +.+..
T Consensus 21 mk~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aLaa~g~nv~~L~~q~~--~f~p~~v----~v~d~~~~~~~~--~~v~~ 92 (398)
T 2y1e_A 21 RLRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHLDTLLRQRA--QTGVTNI----AVADEHAAQRVG--DIPYH 92 (398)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTTEEEEEEEECSSCHHHHHHHHH--HHCCCCE----EESCHHHHHHHC--CCSEE
T ss_pred ceEEEEEccCcHHHHHHHHHHHhCCCceEEEEEEecCCCHHHHHHHHH--HcCCCEE----EEcCHHHhhhcC--CEEEe
Confidence 578999999 9999999999999986 999999872134333332211 1112221 010000000000 01111
Q ss_pred cCC-CCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEec
Q 019445 84 FRN-PEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVIS 127 (341)
Q Consensus 84 ~~~-~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lS 127 (341)
..+ ..++- ...++|+|+-+.--+....-.-+++++|. ++-|.
T Consensus 93 G~~~l~~~a-~~~~~D~Vv~AIvG~aGL~PTlaAi~aGK-~iaLA 135 (398)
T 2y1e_A 93 GSDAATRLV-EQTEADVVLNALVGALGLRPTLAALKTGA-RLALA 135 (398)
T ss_dssp STTHHHHHH-HHSCCSEEEECCCSGGGHHHHHHHHHHTC-EEEEC
T ss_pred cHHHHHHHh-cCCCCCEEEEeCcCHHHHHHHHHHHHCCC-ceEEc
Confidence 000 00010 01368999999888777776677888995 45554
No 261
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=88.12 E-value=0.38 Score=44.13 Aligned_cols=32 Identities=19% Similarity=0.481 Sum_probs=25.6
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
++||||+|+|.+|..+++.|.+.. +++... ++
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G-~~V~~~-dr 40 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQG-KRVAIW-NR 40 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTT-CCEEEE-CS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CEEEEE-eC
Confidence 468999999999999999998875 455444 54
No 262
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=88.10 E-value=0.76 Score=43.00 Aligned_cols=33 Identities=36% Similarity=0.429 Sum_probs=25.1
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCc-EEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDV-ELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~-elv~i~~~ 39 (341)
.+||+|+|+|.+|..++..|+..+.+ || .+.|.
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el-~L~Di 52 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADEL-ALVDV 52 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEE-EEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceE-EEEeC
Confidence 47999999999999888888776643 44 44454
No 263
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=88.09 E-value=0.49 Score=45.16 Aligned_cols=113 Identities=16% Similarity=0.165 Sum_probs=63.2
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCC-cEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCC---cceE--E--CC
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDD-VELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDE---KTLL--F--GE 76 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~-~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~---~~l~--i--~g 76 (341)
|.+|.|.|. |-||...+..+.+||+ |+++++... ...+.++...+ ...+++. -+.+. ..|. . .+
T Consensus 9 ~k~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aL~ag-~nv~~L~~q~~--~f~p~~v----~v~d~~~~~~L~~~l~~~~ 81 (406)
T 1q0q_A 9 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG-KNVTRMVEQCL--EFSPRYA----VMDDEASAKLLKTMLQQQG 81 (406)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES-SCHHHHHHHHH--HHCCSEE----EESSHHHHHHHHHHHHHTT
T ss_pred ceeEEEEccCcHHHHHHHHHHHhCCCccEEEEEEcC-CCHHHHHHHHH--HhCCCEE----EEcCHHHHHHHHHHhhcCC
Confidence 569999999 9999999999999986 999999874 34333332211 1112211 01000 0000 0 01
Q ss_pred EEEEEEecC-CCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEec
Q 019445 77 KPVAVFGFR-NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVIS 127 (341)
Q Consensus 77 ~~i~v~~~~-~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~lS 127 (341)
..+.++... ...++- ...++|+|+-+.--+....-.-+++++|. ++-|.
T Consensus 82 ~~~~v~~G~~~l~~~a-~~~~~D~Vv~AIvG~aGL~PTlaAi~aGK-~iaLA 131 (406)
T 1q0q_A 82 SRTEVLSGQQAACDMA-ALEDVDQVMAAIVGAAGLLPTLAAIRAGK-TILLA 131 (406)
T ss_dssp CCCEEEESHHHHHHHH-TCTTCCEEEECCSSGGGHHHHHHHHHTTC-EEEEC
T ss_pred CCcEEEeCHHHHHHHh-cCCCCCEEEEccccHhHHHHHHHHHHCCC-eEEEe
Confidence 111222110 001110 01368999999888777776777889995 45554
No 264
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=88.02 E-value=1.7 Score=40.18 Aligned_cols=89 Identities=18% Similarity=0.060 Sum_probs=53.2
Q ss_pred ceeEEEEccCHHHHH-HHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEec
Q 019445 6 KIKIGINGFGRIGRL-VARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGF 84 (341)
Q Consensus 6 ~irV~I~G~G~iG~~-llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 84 (341)
+.||.++|.|-+|.. ++++|.++. .++ .+.|..........| . +. | +.++..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G-~~V-~~~D~~~~~~~~~~L----------~------~~-------g--i~v~~g 56 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAG-FEV-SGCDAKMYPPMSTQL----------E------AL-------G--IDVYEG 56 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTT-CEE-EEEESSCCTTHHHHH----------H------HT-------T--CEEEES
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCC-CEE-EEEcCCCCcHHHHHH----------H------hC-------C--CEEECC
Confidence 468999999999996 888888876 454 455542211111111 0 00 1 122222
Q ss_pred CCCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcE
Q 019445 85 RNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKK 123 (341)
Q Consensus 85 ~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~ 123 (341)
.+++.+.+ .++|+|+-+.+...+.....++.++|.++
T Consensus 57 ~~~~~l~~--~~~d~vV~Spgi~~~~p~~~~a~~~gi~v 93 (326)
T 3eag_A 57 FDAAQLDE--FKADVYVIGNVAKRGMDVVEAILNLGLPY 93 (326)
T ss_dssp CCGGGGGS--CCCSEEEECTTCCTTCHHHHHHHHTTCCE
T ss_pred CCHHHcCC--CCCCEEEECCCcCCCCHHHHHHHHcCCcE
Confidence 24444310 26899999988777767777788899853
No 265
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=87.87 E-value=0.36 Score=47.44 Aligned_cols=33 Identities=18% Similarity=0.289 Sum_probs=26.5
Q ss_pred CceeEEEEccCHHHHHHHHHHHcC-CCcEEEEee
Q 019445 5 KKIKIGINGFGRIGRLVARVALQR-DDVELVAVN 37 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~-p~~elv~i~ 37 (341)
+|+||+|+|+|++|..+...|.++ +..+++.+.
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D 41 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVD 41 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEE
Confidence 457999999999999999988875 246776663
No 266
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=87.72 E-value=1.1 Score=41.91 Aligned_cols=97 Identities=15% Similarity=0.245 Sum_probs=60.8
Q ss_pred ceeEEEEcc-CHHHHHHHHH--HHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCE--EEE
Q 019445 6 KIKIGINGF-GRIGRLVARV--ALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEK--PVA 80 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~--l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~--~i~ 80 (341)
..||-|.|+ |+.++.++.. +.++++.++|+..++...+. . . ++.++.. .++
T Consensus 10 ~tkviV~G~~Gk~~~~ml~~~~~~~r~~~~vVagV~P~~~g~--------------~--~--------~v~~G~~~~Gvp 65 (334)
T 3mwd_B 10 HTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDH--------------K--Q--------KFYWGHKEILIP 65 (334)
T ss_dssp TCCEEEESCCHHHHHHHHHHHHHTTCSSCSEEEEECTTSCSE--------------E--E--------EEEETTEEEEEE
T ss_pred CCeEEEECCchHHHHHHHHhcccccCCCceEEEEEcCCCCCc--------------c--c--------eEeccCccCCce
Confidence 379999999 9988888776 55678889999988733210 0 0 1111111 245
Q ss_pred EEecCCCCCCCccCCCccEEEecCCCccCHHHHHHHHh-CCCcEEEe-cC
Q 019445 81 VFGFRNPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLK-GGAKKVVI-SA 128 (341)
Q Consensus 81 v~~~~~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~-~G~k~V~l-Sa 128 (341)
++. +.++++=...++|+++.++|.....+.+.+.+. +|+|.+++ |.
T Consensus 66 vy~--sv~ea~~~~p~~DlaVi~vp~~~a~~ai~ea~~~~Gv~~vViiT~ 113 (334)
T 3mwd_B 66 VFK--NMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAE 113 (334)
T ss_dssp EES--SHHHHHHHCTTCCEEEECCCTTTHHHHHHHHTTSTTCCEEEECCS
T ss_pred eeC--CHHHHhhcCCCCcEEEEecCHHHHHHHHHHHHHHCCCCEEEEECC
Confidence 553 222221000158999999998777666666676 89986665 64
No 267
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=87.52 E-value=0.53 Score=44.35 Aligned_cols=30 Identities=37% Similarity=0.510 Sum_probs=25.6
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+|||+|+|.||+.+++.+.... +++.+.+
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~G-~~V~~~d 203 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGFG-LAIHYHN 203 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CEEEEEEeChhHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999998775 7776653
No 268
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=87.48 E-value=0.43 Score=41.37 Aligned_cols=30 Identities=27% Similarity=0.334 Sum_probs=24.1
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
++||+|+|+|.+|+.+++.|.++. .++..+
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g-~~V~~~ 57 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSG-FKVVVG 57 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTT-CCEEEE
T ss_pred CCEEEEEccCHHHHHHHHHHHHCC-CEEEEE
Confidence 468999999999999999998765 455544
No 269
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=87.43 E-value=0.46 Score=44.11 Aligned_cols=30 Identities=27% Similarity=0.327 Sum_probs=25.6
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+|||+|+|.||+.+++.|.... +++.+.+
T Consensus 140 ~tvGIiG~G~IG~~vA~~l~~~G-~~V~~~d 169 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESLQAWG-FPLRCWS 169 (315)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTT-CCEEEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEEEc
Confidence 58999999999999999998775 6776664
No 270
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=87.40 E-value=0.49 Score=43.51 Aligned_cols=32 Identities=41% Similarity=0.560 Sum_probs=24.7
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCc-EEEEeeCC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDV-ELVAVNDP 39 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~-elv~i~~~ 39 (341)
|||+|+|+|.+|..++..|..++.+ +| .+.|.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v-~L~D~ 33 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEI-ALVDI 33 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEE-EEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeE-EEEEC
Confidence 3899999999999999988877644 44 44454
No 271
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=87.18 E-value=0.66 Score=40.13 Aligned_cols=34 Identities=15% Similarity=0.199 Sum_probs=28.1
Q ss_pred CceeEEEEcc-CHHHHHHHHHHHcCC-CcEEEEeeC
Q 019445 5 KKIKIGINGF-GRIGRLVARVALQRD-DVELVAVND 38 (341)
Q Consensus 5 ~~irV~I~G~-G~iG~~llr~l~~~p-~~elv~i~~ 38 (341)
++++|-|.|+ |.+|+.+++.|.+++ ..+++.+..
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r 38 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR 38 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEES
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEc
Confidence 3468999999 999999999999885 577777643
No 272
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=87.16 E-value=0.5 Score=44.07 Aligned_cols=32 Identities=25% Similarity=0.358 Sum_probs=26.0
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
+||+|+|+|.+|..++..|.....++ +.+.|.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~-V~L~D~ 41 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELAD-VVLYDV 41 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCE-EEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCe-EEEEEC
Confidence 69999999999999999998765446 455565
No 273
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=87.08 E-value=0.43 Score=42.17 Aligned_cols=24 Identities=21% Similarity=0.443 Sum_probs=21.4
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRD 29 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p 29 (341)
++||+|+|+|.+|..+++.|.+..
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~g 25 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINKN 25 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT
T ss_pred CCeEEEECccHHHHHHHHHHHhCC
Confidence 368999999999999999998765
No 274
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=86.99 E-value=0.56 Score=42.21 Aligned_cols=30 Identities=23% Similarity=0.379 Sum_probs=26.0
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~~elv~i~ 37 (341)
|||-|-|+ |+||+.|++.|.++. .+++++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G-~~V~~l~ 31 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARG-HEVTLVS 31 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEE
Confidence 48999999 999999999998875 5777775
No 275
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=86.92 E-value=0.55 Score=43.97 Aligned_cols=29 Identities=24% Similarity=0.195 Sum_probs=23.5
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
+||+|+|+|.+|..+.+.|.+.. .++..+
T Consensus 16 ~kI~iIG~G~mG~~la~~L~~~G-~~V~~~ 44 (366)
T 1evy_A 16 NKAVVFGSGAFGTALAMVLSKKC-REVCVW 44 (366)
T ss_dssp EEEEEECCSHHHHHHHHHHTTTE-EEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCC-CEEEEE
Confidence 39999999999999999998764 455444
No 276
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=86.83 E-value=0.5 Score=42.97 Aligned_cols=27 Identities=30% Similarity=0.482 Sum_probs=20.9
Q ss_pred CCCCCceeEEEEccCHHHHHHHHHHHcC
Q 019445 1 MAGDKKIKIGINGFGRIGRLVARVALQR 28 (341)
Q Consensus 1 ~~~~~~irV~I~G~G~iG~~llr~l~~~ 28 (341)
|..+ ++||+|+|+|.+|..+.+.|.+.
T Consensus 4 m~~~-~m~I~iiG~G~mG~~~a~~L~~~ 30 (317)
T 2qyt_A 4 MNQQ-PIKIAVFGLGGVGGYYGAMLALR 30 (317)
T ss_dssp ---C-CEEEEEECCSHHHHHHHHHHHHH
T ss_pred CCCC-CCEEEEECcCHHHHHHHHHHHhC
Confidence 5554 36999999999999999988765
No 277
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=86.76 E-value=0.52 Score=45.94 Aligned_cols=29 Identities=17% Similarity=0.370 Sum_probs=24.7
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
+||+|+|+|++|..+...|.++. .+++.+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G-~~V~~~ 31 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELG-ANVRCI 31 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhcC-CEEEEE
Confidence 59999999999999999998875 566655
No 278
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=86.74 E-value=0.54 Score=44.03 Aligned_cols=30 Identities=30% Similarity=0.542 Sum_probs=25.6
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+|||+|+|.||+.+++.|.... +++.+.+
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~G-~~V~~~d 171 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAFG-MKVLCYD 171 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred ceEEEECcCHHHHHHHHHHHHCc-CEEEEEC
Confidence 58999999999999999998775 7776654
No 279
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=86.61 E-value=0.65 Score=39.62 Aligned_cols=30 Identities=37% Similarity=0.484 Sum_probs=25.9
Q ss_pred eEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 8 KIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 8 rV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
||.|.|+ |.+|+.+++.|+++. .+++++..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g-~~V~~~~R 32 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRG-HEVLAVVR 32 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred EEEEEcCCCHHHHHHHHHHHHCC-CEEEEEEe
Confidence 7999999 999999999999886 67777753
No 280
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=86.60 E-value=0.47 Score=45.47 Aligned_cols=30 Identities=27% Similarity=0.492 Sum_probs=24.5
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCc-EEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDV-ELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~-elv~i~ 37 (341)
.+|+|+|+|.+|+.+++.|.... + +++.++
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G-~~~V~v~~ 198 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRG-VRAVLVAN 198 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHC-CSEEEEEC
T ss_pred CEEEEEChHHHHHHHHHHHHHCC-CCEEEEEe
Confidence 58999999999999999998765 5 555554
No 281
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=86.44 E-value=0.59 Score=42.78 Aligned_cols=32 Identities=25% Similarity=0.335 Sum_probs=25.1
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
++||+|+|+|.+|+.+++.|.+.. .++. +.++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g-~~V~-~~~~ 61 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMG-HTVT-VWNR 61 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTT-CCEE-EECS
T ss_pred CCeEEEEcccHHHHHHHHHHHhCC-CEEE-EEeC
Confidence 368999999999999999998765 4554 4444
No 282
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=86.19 E-value=0.65 Score=42.96 Aligned_cols=31 Identities=16% Similarity=0.277 Sum_probs=25.6
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCCc------EEEEe
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDDV------ELVAV 36 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~~------elv~i 36 (341)
++||.|.|+ |++|..+++.|.+.+.+ +++.+
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~ 41 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLL 41 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEE
Confidence 469999999 99999999999887643 66665
No 283
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=86.18 E-value=0.69 Score=43.44 Aligned_cols=29 Identities=31% Similarity=0.429 Sum_probs=24.7
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
.+|||+|+|.||+.+++.+.... +++.+.
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~G-~~V~~~ 200 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAFG-MSVRYW 200 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEE
Confidence 58999999999999999998765 676554
No 284
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=86.16 E-value=0.74 Score=41.94 Aligned_cols=32 Identities=28% Similarity=0.315 Sum_probs=25.5
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
+.||+|+|+|.+|..++..|.++. .+++.+ |.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G-~~V~~~-d~ 46 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATG-HTVVLV-DQ 46 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC-CeEEEE-EC
Confidence 368999999999999999998775 566544 44
No 285
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=86.15 E-value=0.55 Score=42.69 Aligned_cols=32 Identities=25% Similarity=0.299 Sum_probs=25.9
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
|+||+|+|+|++|..+.+.|.+.. .++... ++
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G-~~V~~~-d~ 34 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAG-YLLNVF-DL 34 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCC-CeEEEE-cC
Confidence 369999999999999999998875 566544 44
No 286
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=86.10 E-value=0.51 Score=43.64 Aligned_cols=26 Identities=15% Similarity=0.235 Sum_probs=21.2
Q ss_pred CCceeEEEEccCHHHHHHHHHHHcCC
Q 019445 4 DKKIKIGINGFGRIGRLVARVALQRD 29 (341)
Q Consensus 4 ~~~irV~I~G~G~iG~~llr~l~~~p 29 (341)
|+++||+|+|+|.+|..+++.|.+..
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G 45 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAG 45 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTT
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCC
Confidence 34569999999999999999987754
No 287
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=86.02 E-value=1.7 Score=41.97 Aligned_cols=32 Identities=28% Similarity=0.457 Sum_probs=29.2
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
.||+|-|+|-+|+.+++.|.+.. ..+++|.|.
T Consensus 219 k~vaVqG~GnVG~~~a~~L~~~G-akVVavsD~ 250 (419)
T 3aoe_E 219 ARVVVQGLGQVGAAVALHAERLG-MRVVAVATS 250 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEEET
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEEEcC
Confidence 68999999999999999998875 899999886
No 288
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=85.85 E-value=0.64 Score=43.85 Aligned_cols=30 Identities=30% Similarity=0.537 Sum_probs=25.6
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+|||+|+|.||+.+++.+.... +++.+.+
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~G-~~V~~~d 190 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAFG-MNVLVWG 190 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHhCC-CEEEEEC
Confidence 58999999999999999998775 7776653
No 289
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=85.81 E-value=0.64 Score=43.37 Aligned_cols=30 Identities=27% Similarity=0.585 Sum_probs=25.1
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+|||+|+|.||+.+++.+.... +++.+.+
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G-~~V~~~d 176 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVAAQIFHGMG-ATVIGED 176 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999998765 7766553
No 290
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=85.80 E-value=0.62 Score=42.95 Aligned_cols=30 Identities=20% Similarity=0.402 Sum_probs=25.1
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+|||+|+|.||+.+++.+.... +++.+.+
T Consensus 125 ~~vgIIG~G~IG~~~A~~l~~~G-~~V~~~d 154 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRVGKILAALG-AQVRGFS 154 (303)
T ss_dssp CEEEEESCSTHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999998765 6765543
No 291
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=85.76 E-value=0.19 Score=46.77 Aligned_cols=34 Identities=26% Similarity=0.365 Sum_probs=27.8
Q ss_pred ceeEEEEccCHHHHHHHHHHHc-CCCcEEEEeeCCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQ-RDDVELVAVNDPF 40 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~-~p~~elv~i~~~~ 40 (341)
..+++|+|+|.+|+..++.|.. +| ++-+.|.++.
T Consensus 121 ~~~v~iIGaG~~a~~~~~al~~~~~-~~~V~v~~r~ 155 (313)
T 3hdj_A 121 SSVLGLFGAGTQGAEHAAQLSARFA-LEAILVHDPY 155 (313)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSC-CCEEEEECTT
T ss_pred CcEEEEECccHHHHHHHHHHHHhCC-CcEEEEECCc
Confidence 3689999999999999999876 45 6666777774
No 292
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=85.72 E-value=0.76 Score=42.66 Aligned_cols=30 Identities=33% Similarity=0.572 Sum_probs=25.7
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+|||+|+|.||+.+++.+.... +++.+.+
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~G-~~V~~~d 176 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGFD-MDIDYFD 176 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999998765 7776664
No 293
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=85.55 E-value=0.72 Score=42.93 Aligned_cols=33 Identities=21% Similarity=0.303 Sum_probs=26.9
Q ss_pred CceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 5 KKIKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 5 ~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
||++|-|.|+ |.||+.+++.|+++. .+|+++..
T Consensus 23 M~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 56 (375)
T 1t2a_A 23 MRNVALITGITGQDGSYLAEFLLEKG-YEVHGIVR 56 (375)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred cCcEEEEECCCchHHHHHHHHHHHCC-CEEEEEEC
Confidence 3468999999 999999999999875 67777653
No 294
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=85.50 E-value=0.61 Score=43.55 Aligned_cols=30 Identities=23% Similarity=0.268 Sum_probs=25.1
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+|||+|+|.||+.+++.+.... +++.+.+
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~G-~~V~~~d 175 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGWG-ATLQYHE 175 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTSC-CEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999987765 7766553
No 295
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=85.43 E-value=0.69 Score=43.65 Aligned_cols=30 Identities=30% Similarity=0.411 Sum_probs=25.1
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+|||+|+|+||+.+++.|.... +++.+.+
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~G-~~V~~~d 194 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPFG-CNLLYHD 194 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGC-CEEEEEC
T ss_pred CEEeEEEeCHHHHHHHHHHHHCC-CEEEEeC
Confidence 58999999999999999998764 7765553
No 296
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=85.42 E-value=0.63 Score=41.59 Aligned_cols=26 Identities=19% Similarity=0.445 Sum_probs=23.0
Q ss_pred CceeEEEEcc-CHHHHHHHHHHHcCCC
Q 019445 5 KKIKIGINGF-GRIGRLVARVALQRDD 30 (341)
Q Consensus 5 ~~irV~I~G~-G~iG~~llr~l~~~p~ 30 (341)
+++||-|.|+ |++|+.+++.|.++..
T Consensus 5 ~~~~vlVtGatG~iG~~l~~~L~~~g~ 31 (319)
T 4b8w_A 5 QSMRILVTGGSGLVGKAIQKVVADGAG 31 (319)
T ss_dssp CCCEEEEETCSSHHHHHHHHHHHTTTC
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhcCC
Confidence 4579999999 9999999999998763
No 297
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=85.42 E-value=0.79 Score=42.90 Aligned_cols=30 Identities=33% Similarity=0.505 Sum_probs=25.5
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+|||+|+|.||+.+++.+.... +++.+.+
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~G-~~V~~~d 195 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSFG-MKTIGYD 195 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999998765 7776654
No 298
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=85.41 E-value=0.69 Score=43.50 Aligned_cols=30 Identities=27% Similarity=0.540 Sum_probs=25.6
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+|||+|+|.||+.+++.+.... +++.+.+
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~G-~~V~~~d 178 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAMG-AKVIAYD 178 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CeEEEEecCHHHHHHHHHHhhCC-CEEEEEC
Confidence 58999999999999999998764 7776664
No 299
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=85.38 E-value=0.69 Score=43.20 Aligned_cols=30 Identities=20% Similarity=0.438 Sum_probs=25.2
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+|||+|+|.||+.+++.+.... +++.+.+
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~G-~~V~~~d 175 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGFG-AKVIAYD 175 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999998765 7766553
No 300
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=85.37 E-value=0.79 Score=43.11 Aligned_cols=30 Identities=30% Similarity=0.444 Sum_probs=25.4
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+|||+|+|.||+.+++.|.... +++.+.+
T Consensus 169 ~tvGIIG~G~IG~~vA~~l~~~G-~~V~~~d 198 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRAKAFG-FNVLFYD 198 (347)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999998775 7776543
No 301
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=85.37 E-value=0.77 Score=41.52 Aligned_cols=32 Identities=25% Similarity=0.319 Sum_probs=26.0
Q ss_pred CceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEee
Q 019445 5 KKIKIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 5 ~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~ 37 (341)
+++||.|.|+ |++|+.+++.|.++. .+++.+.
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~v~~~~ 34 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRG-DVELVLR 34 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCT-TEEEECC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEe
Confidence 3468999999 999999999999875 5665553
No 302
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=85.27 E-value=0.82 Score=40.40 Aligned_cols=31 Identities=26% Similarity=0.360 Sum_probs=25.0
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
..+||||+|+|.+|..+++.|.++. .++...
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G-~~V~~~ 48 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLG-HEVTIG 48 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC-CEEEEE
Confidence 3579999999999999999998875 465544
No 303
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=85.21 E-value=0.82 Score=42.94 Aligned_cols=30 Identities=30% Similarity=0.431 Sum_probs=25.0
Q ss_pred eeEEEEccCHHHHHHHHHHH-cCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVAL-QRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~-~~p~~elv~i~ 37 (341)
.+|||+|+|+||+.+++.+. ... +++.+..
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~G-~~V~~~d 194 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGLG-MKLVYYD 194 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CEEEEEC
T ss_pred CEEEEEEECHHHHHHHHHHHHhcC-CEEEEEC
Confidence 58999999999999999998 765 6766543
No 304
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=85.19 E-value=0.57 Score=42.03 Aligned_cols=30 Identities=20% Similarity=0.256 Sum_probs=24.1
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
+||+|+|+|.+|..+++.|.+ . .++. +.++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g-~~V~-~~~~ 31 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-R-FPTL-VWNR 31 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-T-SCEE-EECS
T ss_pred CeEEEEcccHHHHHHHHHHhC-C-CeEE-EEeC
Confidence 489999999999999999987 4 6654 4444
No 305
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=85.18 E-value=0.59 Score=42.88 Aligned_cols=30 Identities=37% Similarity=0.581 Sum_probs=25.3
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+|||+|+|.||+.+++.|.... +++.+.+
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~G-~~V~~~d 152 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAFG-MRVIAYT 152 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CEEEEEC
T ss_pred chheeeccCchhHHHHHHHHhhC-cEEEEEe
Confidence 58999999999999999998764 6776663
No 306
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=85.08 E-value=0.73 Score=43.11 Aligned_cols=29 Identities=31% Similarity=0.535 Sum_probs=24.9
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
.+|||+|+|+||+++++.+.... +++.+.
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~fg-~~v~~~ 170 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAFG-MKVLCY 170 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred cEEEEECcchHHHHHHHhhcccC-ceeeec
Confidence 58999999999999999998765 777655
No 307
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=85.04 E-value=0.69 Score=43.07 Aligned_cols=30 Identities=33% Similarity=0.476 Sum_probs=24.9
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
++|||+|+|+||+.+++.+.... +++.+..
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~G-~~V~~~d 185 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPFG-VQRFLYT 185 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGT-CCEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999998765 5665554
No 308
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=85.00 E-value=0.82 Score=44.37 Aligned_cols=29 Identities=34% Similarity=0.424 Sum_probs=24.5
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
++||+|+|+|++|..++..|.+ ..+++.+
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~--G~~V~~~ 64 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ--NHEVVAL 64 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TSEEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHc--CCeEEEE
Confidence 4699999999999999998886 4677665
No 309
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=84.95 E-value=0.78 Score=43.54 Aligned_cols=30 Identities=30% Similarity=0.532 Sum_probs=25.1
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+|||+|+|.||+.+++.+.... +++.+.+
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~fG-~~V~~~d 206 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGFR-ARIRVFD 206 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTSC-CEEEEEC
T ss_pred CEEEEecCCcccHHHHHhhhhCC-CEEEEEC
Confidence 58999999999999999987664 7776553
No 310
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=84.93 E-value=3.6 Score=39.79 Aligned_cols=87 Identities=17% Similarity=0.172 Sum_probs=51.1
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCC--hhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEe
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFIS--TDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFG 83 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~--~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 83 (341)
..||.|+|.|.+|..++|+|.++. .++ .+.|.... ...... +. +. | +.+..
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G-~~V-~~~D~~~~~~~~~~~~----------L~------~~-------g--i~~~~ 61 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLG-AIV-TVNDGKPFDENPTAQS----------LL------EE-------G--IKVVC 61 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTT-CEE-EEEESSCGGGCHHHHH----------HH------HT-------T--CEEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCC-CEE-EEEeCCcccCChHHHH----------HH------hC-------C--CEEEE
Confidence 368999999999999999999886 454 34444111 011100 10 00 1 12222
Q ss_pred cCCCCCCCccCCC-ccEEEecCCCccCHHHHHHHHhCCCc
Q 019445 84 FRNPEEIPWAKTG-AEYVVESTGVFTDKDKAAAHLKGGAK 122 (341)
Q Consensus 84 ~~~~~~~~w~~~~-~DvV~~at~~~~s~~~~~~~l~~G~k 122 (341)
..+++++ ..+ +|+|+-+.+...+.....++.++|.+
T Consensus 62 g~~~~~~---~~~~~d~vv~spgi~~~~p~~~~a~~~gi~ 98 (451)
T 3lk7_A 62 GSHPLEL---LDEDFCYMIKNPGIPYNNPMVKKALEKQIP 98 (451)
T ss_dssp SCCCGGG---GGSCEEEEEECTTSCTTSHHHHHHHHTTCC
T ss_pred CCChHHh---hcCCCCEEEECCcCCCCChhHHHHHHCCCc
Confidence 2233322 124 89999998876666666677777775
No 311
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=84.77 E-value=1 Score=41.70 Aligned_cols=33 Identities=21% Similarity=0.228 Sum_probs=27.1
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcC-CCcEEEEeeC
Q 019445 6 KIKIGINGF-GRIGRLVARVALQR-DDVELVAVND 38 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~-p~~elv~i~~ 38 (341)
+++|-|.|+ |+||+.+++.|+++ ...+|+++..
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r 44 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDK 44 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEEC
Confidence 479999999 99999999999883 2478777753
No 312
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=84.75 E-value=0.79 Score=42.36 Aligned_cols=30 Identities=37% Similarity=0.618 Sum_probs=25.0
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+|||+|+|.||+.+++.+.... +++.+.+
T Consensus 145 ~~vgIIG~G~IG~~~A~~l~~~G-~~V~~~d 174 (311)
T 2cuk_A 145 LTLGLVGMGRIGQAVAKRALAFG-MRVVYHA 174 (311)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEEECHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999998765 6765543
No 313
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=84.74 E-value=0.88 Score=43.99 Aligned_cols=32 Identities=31% Similarity=0.578 Sum_probs=28.8
Q ss_pred eeEEEEccCHHHHHHHHHHHc-CCCcEEEEeeCC
Q 019445 7 IKIGINGFGRIGRLVARVALQ-RDDVELVAVNDP 39 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~-~p~~elv~i~~~ 39 (341)
.+|+|+|+|.||+.+++.|.. .. +++++++|+
T Consensus 213 ktvgI~G~G~VG~~vA~~l~~~~G-~kVv~~sD~ 245 (419)
T 1gtm_A 213 KTIAIQGYGNAGYYLAKIMSEDFG-MKVVAVSDS 245 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CEEEEEECS
T ss_pred CEEEEEcCCHHHHHHHHHHHHhcC-CEEEEEeCC
Confidence 689999999999999999988 64 899999876
No 314
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=84.56 E-value=0.7 Score=42.83 Aligned_cols=30 Identities=17% Similarity=0.209 Sum_probs=23.7
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
++||+|+|+|.+|..+...|.+.. .++..+
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g-~~V~~~ 32 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAG-EAINVL 32 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTT-CCEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC-CEEEEE
Confidence 358999999999999999988764 344444
No 315
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=84.51 E-value=0.91 Score=43.13 Aligned_cols=32 Identities=25% Similarity=0.378 Sum_probs=24.8
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
|+||+|+|+|.+|..+...|......++..+.
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred CceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 36999999999999999998764335665553
No 316
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=84.50 E-value=0.82 Score=42.65 Aligned_cols=30 Identities=33% Similarity=0.548 Sum_probs=25.1
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
++|||+|+|+||+.+++.+.... +++.+.+
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G-~~V~~~d 180 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFN-MRILYYS 180 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHhCC-CEEEEEC
Confidence 58999999999999999998765 6765553
No 317
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=84.48 E-value=1.6 Score=40.16 Aligned_cols=22 Identities=32% Similarity=0.460 Sum_probs=18.7
Q ss_pred eEEEEccCHHHHHHHHHHHcCC
Q 019445 8 KIGINGFGRIGRLVARVALQRD 29 (341)
Q Consensus 8 rV~I~G~G~iG~~llr~l~~~p 29 (341)
||+|+|+|.+|..++-.+...+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~ 22 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRG 22 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHT
T ss_pred CEEEECcCHHHHHHHHHHHhCC
Confidence 6999999999998888776554
No 318
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=84.34 E-value=1 Score=41.76 Aligned_cols=32 Identities=25% Similarity=0.392 Sum_probs=25.0
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCc-EEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDV-ELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~-elv~i~~~ 39 (341)
+.||+|+|+|.+|..++..|...+ + +++ +.|.
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g-~~~v~-l~D~ 40 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKE-LADVV-LVDI 40 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CCEEE-EECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC-CCeEE-EEec
Confidence 469999999999999999888775 4 554 4454
No 319
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=84.33 E-value=0.77 Score=42.93 Aligned_cols=29 Identities=38% Similarity=0.494 Sum_probs=24.2
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
.+|||+|+|.||+.+++.+.... +++...
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~G-~~V~~~ 193 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAFD-CPISYF 193 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTT-CCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEE
Confidence 58999999999999999998765 565544
No 320
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=84.29 E-value=0.86 Score=42.02 Aligned_cols=30 Identities=40% Similarity=0.640 Sum_probs=25.3
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+|||+|+|.||+.+++.+.... +++.+..
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~G-~~V~~~d 172 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANALG-MNILLYD 172 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred ceEEEEccCHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999998765 7776553
No 321
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=84.29 E-value=0.88 Score=41.92 Aligned_cols=36 Identities=28% Similarity=0.358 Sum_probs=27.3
Q ss_pred CCCCCceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 1 MAGDKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 1 ~~~~~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
|.+ ++||+|+|+|.+|..++..|......+ +.+.|.
T Consensus 1 M~~--~~kI~VIGaG~~G~~ia~~la~~g~~~-V~l~D~ 36 (317)
T 2ewd_A 1 MIE--RRKIAVIGSGQIGGNIAYIVGKDNLAD-VVLFDI 36 (317)
T ss_dssp CCC--CCEEEEECCSHHHHHHHHHHHHHTCCE-EEEECS
T ss_pred CCC--CCEEEEECCCHHHHHHHHHHHhCCCce-EEEEeC
Confidence 554 359999999999999999988765336 455555
No 322
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=84.24 E-value=0.83 Score=42.62 Aligned_cols=29 Identities=38% Similarity=0.544 Sum_probs=24.6
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
.+|||+|+|.||+.+++.+.... +++.+.
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~~G-~~V~~~ 175 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIPFG-VKLYYW 175 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGT-CEEEEE
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEEE
Confidence 68999999999999999998765 676554
No 323
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=84.20 E-value=1.1 Score=42.26 Aligned_cols=36 Identities=19% Similarity=0.264 Sum_probs=28.0
Q ss_pred CCCCCceeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 1 MAGDKKIKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 1 ~~~~~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
|.+|++.+|.|+|+|.+|..++..|.++. ++++-+.
T Consensus 21 M~~~~~~dV~IVGaG~aGl~~A~~L~~~G-~~v~v~E 56 (398)
T 2xdo_A 21 MNLLSDKNVAIIGGGPVGLTMAKLLQQNG-IDVSVYE 56 (398)
T ss_dssp --CCTTCEEEEECCSHHHHHHHHHHHTTT-CEEEEEE
T ss_pred ccccCCCCEEEECCCHHHHHHHHHHHHCC-CCEEEEe
Confidence 55555679999999999999999998875 6766664
No 324
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=84.17 E-value=0.87 Score=42.09 Aligned_cols=30 Identities=40% Similarity=0.619 Sum_probs=25.3
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+|||+|+|.||+.+++.+.... +++.+.+
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~G-~~V~~~d 172 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAMG-MKVLAYD 172 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999998765 7776553
No 325
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=84.12 E-value=0.77 Score=41.81 Aligned_cols=31 Identities=29% Similarity=0.500 Sum_probs=25.9
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCC-CcEEEEee
Q 019445 7 IKIGINGF-GRIGRLVARVALQRD-DVELVAVN 37 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p-~~elv~i~ 37 (341)
+||-|.|+ |+||+.+++.|.++. ..+++.+.
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~ 36 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINID 36 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 47999999 999999999998764 46777764
No 326
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=84.07 E-value=0.86 Score=42.53 Aligned_cols=30 Identities=17% Similarity=0.410 Sum_probs=25.3
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+|||+|+|.||+.+++.+.... +++.+.+
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G-~~V~~~d 176 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGFG-AKVITYD 176 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999998765 7776554
No 327
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=83.96 E-value=0.88 Score=43.43 Aligned_cols=29 Identities=21% Similarity=0.311 Sum_probs=24.9
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
.+|||+|+|.||+.+++.|.... +++.+.
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~G-~~V~~~ 148 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEALG-IRTLLC 148 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEEeECHHHHHHHHHHHHCC-CEEEEE
Confidence 58999999999999999998765 776655
No 328
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=83.91 E-value=0.8 Score=42.29 Aligned_cols=33 Identities=18% Similarity=0.277 Sum_probs=25.9
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
.++|.|.|+ |.+|+.+++.|.+....+++++..
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r 79 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDN 79 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence 368999999 999999999998875456666643
No 329
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=83.85 E-value=0.38 Score=42.77 Aligned_cols=32 Identities=13% Similarity=0.092 Sum_probs=26.3
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
++||+|+|+|.+|..+.+.|.+.. .+++.++.
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G-~~V~~~~~ 37 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVG-HYVTVLHA 37 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTT-CEEEECSS
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCC-CEEEEecC
Confidence 469999999999999999998875 57666543
No 330
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=83.64 E-value=1.1 Score=42.90 Aligned_cols=37 Identities=24% Similarity=0.249 Sum_probs=27.9
Q ss_pred CCCCCceeEEEEccCHHHHHHHHHHHcCCC-cEEEEee
Q 019445 1 MAGDKKIKIGINGFGRIGRLVARVALQRDD-VELVAVN 37 (341)
Q Consensus 1 ~~~~~~irV~I~G~G~iG~~llr~l~~~p~-~elv~i~ 37 (341)
|..++..+|+|+|+|..|..+++.|.++.. .+++-+.
T Consensus 1 M~~~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E 38 (447)
T 2gv8_A 1 MCLPTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFE 38 (447)
T ss_dssp --CCSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEEC
T ss_pred CCCCCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEe
Confidence 655566899999999999999999998752 1666554
No 331
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=83.63 E-value=1 Score=41.75 Aligned_cols=34 Identities=15% Similarity=0.193 Sum_probs=26.7
Q ss_pred CceeEEEEcc-CHHHHHHHHHHHcCCCc------EEEEeeCC
Q 019445 5 KKIKIGINGF-GRIGRLVARVALQRDDV------ELVAVNDP 39 (341)
Q Consensus 5 ~~irV~I~G~-G~iG~~llr~l~~~p~~------elv~i~~~ 39 (341)
+++||+|+|+ |.+|..++..|...+.+ ||+.+ |.
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~-Di 44 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLL-EI 44 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEE-CC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEE-cC
Confidence 3579999999 99999999998877643 66654 54
No 332
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=83.60 E-value=1.6 Score=40.94 Aligned_cols=30 Identities=23% Similarity=0.290 Sum_probs=23.7
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCc-EEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDV-ELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~-elv~i~ 37 (341)
-+|.|+|+|-+|...++++.... . +++++.
T Consensus 184 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 214 (370)
T 4ej6_A 184 STVAILGGGVIGLLTVQLARLAG-ATTVILST 214 (370)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 37999999999999999887765 5 565553
No 333
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=83.57 E-value=2.7 Score=39.80 Aligned_cols=31 Identities=16% Similarity=0.171 Sum_probs=24.2
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
-+|.|+|+|-+|...++++....--+++++.
T Consensus 215 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~ 245 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILKHAGASKVILSE 245 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEC
Confidence 3799999999999999988776522666664
No 334
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=83.45 E-value=0.86 Score=38.43 Aligned_cols=31 Identities=19% Similarity=0.216 Sum_probs=25.4
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
+..|+|+|+|..|..++..|.++. ++++-+-
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G-~~V~v~E 32 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAG-HQVHLFD 32 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC-CCEEEEE
Confidence 478999999999999999998875 5655553
No 335
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=83.45 E-value=1.3 Score=37.77 Aligned_cols=29 Identities=21% Similarity=0.302 Sum_probs=24.2
Q ss_pred eEEEEc-cCHHHHHHHHHHHcCCCcEEEEee
Q 019445 8 KIGING-FGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 8 rV~I~G-~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
||+|+| +|++|+.+++.|.++. .++..++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g-~~V~~~~ 31 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLG-HEIVVGS 31 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTT-CEEEEEE
T ss_pred eEEEEcCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 799999 6999999999998875 5766553
No 336
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=83.18 E-value=1.1 Score=42.13 Aligned_cols=31 Identities=23% Similarity=0.463 Sum_probs=25.0
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
-+|.|.|+|.+|..+++++.... .+++++..
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~G-a~Vi~~~~ 219 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAFG-SKVTVIST 219 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 37999999999999999887765 57766653
No 337
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=83.18 E-value=0.71 Score=42.78 Aligned_cols=32 Identities=16% Similarity=0.242 Sum_probs=25.0
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
-+|.|+|+|-+|...++++......+++++..
T Consensus 173 ~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~ 204 (345)
T 3jv7_A 173 STAVVIGVGGLGHVGIQILRAVSAARVIAVDL 204 (345)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 37999999999999998887664467777643
No 338
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=83.15 E-value=0.99 Score=43.04 Aligned_cols=29 Identities=17% Similarity=0.288 Sum_probs=24.5
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
.+|||+|+|.||+.+++.|.... +++.+.
T Consensus 117 ~tvGIIGlG~IG~~vA~~l~~~G-~~V~~~ 145 (380)
T 2o4c_A 117 RTYGVVGAGQVGGRLVEVLRGLG-WKVLVC 145 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEEeCCHHHHHHHHHHHHCC-CEEEEE
Confidence 58999999999999999998764 676554
No 339
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=82.93 E-value=0.95 Score=43.95 Aligned_cols=35 Identities=23% Similarity=0.317 Sum_probs=30.0
Q ss_pred CceeEEEEcc-CHHHHHHHHHHHc---CCC-cEEEEeeCC
Q 019445 5 KKIKIGINGF-GRIGRLVARVALQ---RDD-VELVAVNDP 39 (341)
Q Consensus 5 ~~irV~I~G~-G~iG~~llr~l~~---~p~-~elv~i~~~ 39 (341)
.|.||.|.|. |-||...+..+.+ ||+ |+++++...
T Consensus 76 ~mk~I~ILGSTGSIGtqTLdVi~~~p~~pd~f~V~aLaAg 115 (488)
T 3au8_A 76 KPINVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYVN 115 (488)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHHHHSCCEEEEEEEES
T ss_pred cceEEEEEccCcHHHHHHHHHHHcccCCCCeEEEEEEEcC
Confidence 3568999999 9999999999998 554 999999874
No 340
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=82.90 E-value=1.2 Score=40.60 Aligned_cols=31 Identities=29% Similarity=0.290 Sum_probs=26.1
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEee
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~ 37 (341)
+++|-|.|+ |.||+.+++.|+++. .+++.+.
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~ 36 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHG-YDVVIAD 36 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCC-CcEEEEe
Confidence 468999999 999999999999885 5666664
No 341
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=82.87 E-value=0.86 Score=37.98 Aligned_cols=30 Identities=23% Similarity=0.253 Sum_probs=24.7
Q ss_pred eeEEEEccCHHHHHHHHHHHcC-CCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQR-DDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~-p~~elv~i~ 37 (341)
.+|.|+|+|++|+.+++.|.++ . .+++.+.
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g-~~V~vid 70 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYG-KISLGIE 70 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHC-SCEEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhccC-CeEEEEE
Confidence 5899999999999999999765 4 5666664
No 342
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=82.66 E-value=0.89 Score=44.53 Aligned_cols=32 Identities=16% Similarity=0.327 Sum_probs=25.7
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
++||||+|+|.+|..+++.|.++. +++. +.++
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G-~~V~-v~dr 36 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRG-YTVA-IYNR 36 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTT-CCEE-EECS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCC-CEEE-EEcC
Confidence 468999999999999999998875 4654 4444
No 343
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=82.66 E-value=0.62 Score=42.09 Aligned_cols=31 Identities=16% Similarity=0.305 Sum_probs=24.3
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
+||+|+|+|++|..+.+.|.++. .++... ++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G-~~V~~~-dr 32 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAG-FDVTVW-NR 32 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHT-CCEEEE-CS
T ss_pred CeEEEEccCHHHHHHHHHHHHCC-CeEEEE-cC
Confidence 48999999999999999998764 455444 44
No 344
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=82.34 E-value=0.97 Score=44.40 Aligned_cols=32 Identities=25% Similarity=0.304 Sum_probs=25.1
Q ss_pred CCceeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 4 DKKIKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 4 ~~~irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
|.+.||||+|+|.+|..+++.|.++. ++|...
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G-~~V~v~ 44 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRG-YTVSIF 44 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTT-CCEEEE
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCC-CeEEEE
Confidence 44678999999999999999999875 565444
No 345
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=82.32 E-value=1.1 Score=43.06 Aligned_cols=29 Identities=28% Similarity=0.403 Sum_probs=24.8
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
.++||+|+|.||+.+++.+.... +++.+.
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~G-~~V~~~ 174 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESLG-MYVYFY 174 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEEeECHHHHHHHHHHHHCC-CEEEEE
Confidence 58999999999999999998765 776554
No 346
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=82.31 E-value=1.1 Score=42.97 Aligned_cols=30 Identities=33% Similarity=0.404 Sum_probs=25.2
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+|||+|+|.||+.+++.+.... +++.+.+
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~G-~~V~~~d 221 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPFD-VHLHYTD 221 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGT-CEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHhCC-CEEEEEc
Confidence 58999999999999999998765 7776553
No 347
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=82.25 E-value=0.85 Score=42.94 Aligned_cols=30 Identities=23% Similarity=0.265 Sum_probs=25.0
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+|.|+|+|.+|+.+++.+.... .+++.++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~G-a~V~v~d 197 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLG-AQVQIFD 197 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEEe
Confidence 58999999999999999998876 4665554
No 348
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=82.03 E-value=0.94 Score=44.62 Aligned_cols=33 Identities=12% Similarity=0.187 Sum_probs=26.4
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
.|+||||+|+|.+|..+++.|.++. ++++.. ++
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G-~~V~v~-dr 35 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHG-FVVCAF-NR 35 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTT-CCEEEE-CS
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCC-CEEEEE-eC
Confidence 3468999999999999999998876 565544 44
No 349
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=81.97 E-value=1.4 Score=39.73 Aligned_cols=30 Identities=23% Similarity=0.333 Sum_probs=25.9
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~~elv~i~ 37 (341)
++|-|.|+ |.+|+.+++.|.++. .+++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 33 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQQNN-WHAVGCG 33 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHhCC-CeEEEEc
Confidence 58999999 999999999999876 6777664
No 350
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=81.57 E-value=0.95 Score=42.09 Aligned_cols=31 Identities=23% Similarity=0.341 Sum_probs=26.7
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~~elv~i~ 37 (341)
|||.|.|+ |++|+.+++.|.+++.++++.+.
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d 32 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVH 32 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEC
Confidence 37999999 99999999999988766777663
No 351
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=81.46 E-value=1.3 Score=41.17 Aligned_cols=31 Identities=19% Similarity=0.243 Sum_probs=26.4
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
.+|-|.|+ |+||+.+++.|.++. .+|+++..
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~r 60 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKG-YEVHGLIR 60 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CeEEEEcCCchHHHHHHHHHHHCC-CEEEEEec
Confidence 58999999 999999999999876 57777653
No 352
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=81.38 E-value=2.1 Score=41.61 Aligned_cols=93 Identities=17% Similarity=0.078 Sum_probs=55.5
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEecCC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRN 86 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 86 (341)
.+|-|+|+|.+|...++.|.+.. .+++.+. +.... .+..+. . .+ .+.. +..+.+
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~g-a~V~vi~-~~~~~-~~~~l~---~-------------~~-~i~~------~~~~~~ 66 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAG-ARLTVNA-LTFIP-QFTVWA---N-------------EG-MLTL------VEGPFD 66 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-BEEEEEE-SSCCH-HHHHHH---T-------------TT-SCEE------EESSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCc-CEEEEEc-CCCCH-HHHHHH---h-------------cC-CEEE------EECCCC
Confidence 68999999999999999999876 5555443 31222 111110 0 00 1110 111112
Q ss_pred CCCCCccCCCccEEEecCCCc-cCHHHHHHHHhCCCcEEEecCC
Q 019445 87 PEEIPWAKTGAEYVVESTGVF-TDKDKAAAHLKGGAKKVVISAP 129 (341)
Q Consensus 87 ~~~~~w~~~~~DvV~~at~~~-~s~~~~~~~l~~G~k~V~lSa~ 129 (341)
++.+ .++|+||-||+.. .....+..+.+.|+.+-+++.+
T Consensus 67 ~~~l----~~~~lVi~at~~~~~n~~i~~~a~~~~i~vn~~d~~ 106 (457)
T 1pjq_A 67 ETLL----DSCWLAIAATDDDTVNQRVSDAAESRRIFCNVVDAP 106 (457)
T ss_dssp GGGG----TTCSEEEECCSCHHHHHHHHHHHHHTTCEEEETTCT
T ss_pred cccc----CCccEEEEcCCCHHHHHHHHHHHHHcCCEEEECCCc
Confidence 2222 3789999999977 4666677777788865555543
No 353
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=81.34 E-value=2.3 Score=39.59 Aligned_cols=32 Identities=22% Similarity=0.233 Sum_probs=24.9
Q ss_pred eeEEEEccCHHHHHH-HHHH-HcCCCcE-EEEeeCC
Q 019445 7 IKIGINGFGRIGRLV-ARVA-LQRDDVE-LVAVNDP 39 (341)
Q Consensus 7 irV~I~G~G~iG~~l-lr~l-~~~p~~e-lv~i~~~ 39 (341)
-+|.|+|+|-+|... ++++ .... .+ ++++...
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~G-a~~Vi~~~~~ 208 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKG-YENLYCLGRR 208 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTC-CCEEEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcC-CcEEEEEeCC
Confidence 489999999999999 8887 5554 55 7776543
No 354
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=81.34 E-value=1.4 Score=39.99 Aligned_cols=31 Identities=26% Similarity=0.347 Sum_probs=26.2
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
+||.|.|+ |++|+.+++.|.++. .+++++..
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 33 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEG-LSVVVVDN 33 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeC
Confidence 48999999 999999999999875 57777643
No 355
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=81.24 E-value=3.4 Score=40.32 Aligned_cols=32 Identities=9% Similarity=0.034 Sum_probs=26.3
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
+++|-|.|+ |++|+.+++.|.+.. .+|+++.-
T Consensus 150 ~~~VLVTGatG~iG~~l~~~L~~~g-~~V~~l~R 182 (508)
T 4f6l_B 150 LGNTLLTGATGFLGAYLIEALQGYS-HRIYCFIR 182 (508)
T ss_dssp CEEEEESCTTSHHHHHHHHHTBTTE-EEEEEEEE
T ss_pred CCeEEEECCccchHHHHHHHHHhcC-CEEEEEEC
Confidence 478999999 999999999996553 67777754
No 356
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=81.19 E-value=1.2 Score=43.60 Aligned_cols=32 Identities=25% Similarity=0.408 Sum_probs=26.5
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
+.|||-|+|+|++|+.+++.|..+. .+++.|.
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~-~~v~vId 33 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGEN-NDITIVD 33 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTT-EEEEEEE
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCC-CCEEEEE
Confidence 4579999999999999999998764 5777664
No 357
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=81.04 E-value=1.1 Score=40.92 Aligned_cols=33 Identities=21% Similarity=0.250 Sum_probs=25.7
Q ss_pred CceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 5 KKIKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 5 ~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
.+++|-|.|+ |++|+.+++.|+++. .+++++..
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r 51 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQG-RTVRGFDL 51 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCC-CEEEEEeC
Confidence 3578999999 999999999999876 57766643
No 358
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=80.82 E-value=1.5 Score=39.85 Aligned_cols=31 Identities=26% Similarity=0.388 Sum_probs=26.4
Q ss_pred eEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 8 KIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 8 rV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
||-|.|+ |++|+.+++.|.+++..+++++..
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r 33 (345)
T 2bll_A 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDI 33 (345)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEES
T ss_pred eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence 7999999 999999999999875567777753
No 359
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=80.36 E-value=1.4 Score=40.53 Aligned_cols=32 Identities=25% Similarity=0.322 Sum_probs=26.9
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
+++|-|.|+ |++|+.+++.|.++. .+++++..
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 59 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKLD-QKVVGLDN 59 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 468999999 999999999999875 57777653
No 360
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=80.26 E-value=1.3 Score=41.08 Aligned_cols=29 Identities=24% Similarity=0.367 Sum_probs=23.6
Q ss_pred eEEEEccCHHHHHHHHHHHcCCCc-EEEEee
Q 019445 8 KIGINGFGRIGRLVARVALQRDDV-ELVAVN 37 (341)
Q Consensus 8 rV~I~G~G~iG~~llr~l~~~p~~-elv~i~ 37 (341)
+|.|+|+|-+|..+++++.... . +++++.
T Consensus 167 ~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~ 196 (343)
T 2dq4_A 167 SVLITGAGPIGLMAAMVVRASG-AGPILVSD 196 (343)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 6999999999999999887665 5 666664
No 361
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=80.24 E-value=1.7 Score=40.73 Aligned_cols=96 Identities=16% Similarity=0.223 Sum_probs=52.0
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEecC
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 85 (341)
-+|.|+|+ |-+|...++++......+++++... .+....+.+ .|. ...++... ....
T Consensus 173 ~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~---~~~~~~~~~----lGa------------d~vi~~~~-~~~~-- 230 (363)
T 4dvj_A 173 PAILIVGGAGGVGSIAVQIARQRTDLTVIATASR---PETQEWVKS----LGA------------HHVIDHSK-PLAA-- 230 (363)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSS---HHHHHHHHH----TTC------------SEEECTTS-CHHH--
T ss_pred CEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCC---HHHHHHHHH----cCC------------CEEEeCCC-CHHH--
Confidence 47999996 9999999988765334677777542 222221111 110 00111000 0000
Q ss_pred CCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCcEEEe
Q 019445 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAKKVVI 126 (341)
Q Consensus 86 ~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~l 126 (341)
...++ ...++|+||+|+|.....+.+.++++.|-+.+.+
T Consensus 231 ~v~~~--~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 231 EVAAL--GLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp HHHTT--CSCCEEEEEECSCHHHHHHHHHHHSCTTCEEEEC
T ss_pred HHHHh--cCCCceEEEECCCchhhHHHHHHHhcCCCEEEEE
Confidence 00111 1247999999999765556666677776655544
No 362
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=80.17 E-value=1.5 Score=42.41 Aligned_cols=29 Identities=28% Similarity=0.441 Sum_probs=24.7
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
.+|||+|+|.||+.+++.+.... +++.+.
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~G-~~V~~y 185 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESLG-MTVRYY 185 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEEE
Confidence 58999999999999999998775 776554
No 363
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=80.12 E-value=1.2 Score=42.00 Aligned_cols=30 Identities=27% Similarity=0.284 Sum_probs=24.6
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcE-EEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVE-LVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~e-lv~i~ 37 (341)
.+|||+|+|.||+.+++.|.... ++ +.+.+
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~G-~~~V~~~d 195 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPFN-PKELLYYD 195 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGC-CSEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCC-CcEEEEEC
Confidence 58999999999999999998764 65 65543
No 364
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=80.01 E-value=1.6 Score=39.82 Aligned_cols=33 Identities=30% Similarity=0.560 Sum_probs=27.0
Q ss_pred CceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 5 KKIKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 5 ~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
.|++|.|.|+ |++|+.+++.|.++. .+++++..
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r 53 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLLERG-DKVVGIDN 53 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCC-CEEEEEEC
Confidence 3468999999 999999999999876 67777743
No 365
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=79.95 E-value=1.2 Score=40.63 Aligned_cols=35 Identities=23% Similarity=0.306 Sum_probs=25.4
Q ss_pred CCCCCceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEee
Q 019445 1 MAGDKKIKIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 1 ~~~~~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~ 37 (341)
|+.++ .+|-|-|+ |+||+.+++.|+++. .+++++.
T Consensus 1 ~~~~~-~~vlVTGatGfIG~~l~~~L~~~G-~~V~~~~ 36 (337)
T 2c29_D 1 MGSQS-ETVCVTGASGFIGSWLVMRLLERG-YTVRATV 36 (337)
T ss_dssp ------CEEEETTTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCCCC-CEEEEECCchHHHHHHHHHHHHCC-CEEEEEE
Confidence 66644 68999999 999999999998876 5776654
No 366
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=79.94 E-value=1.3 Score=41.23 Aligned_cols=30 Identities=20% Similarity=0.275 Sum_probs=23.9
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCc-EEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDV-ELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~-elv~i~ 37 (341)
-+|.|+|+|-+|...++++.... . +++++.
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~ 198 (352)
T 3fpc_A 168 DTVCVIGIGPVGLMSVAGANHLG-AGRIFAVG 198 (352)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTT-CSSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CcEEEEEC
Confidence 36999999999999999887765 4 566654
No 367
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=79.77 E-value=1 Score=40.43 Aligned_cols=31 Identities=26% Similarity=0.293 Sum_probs=25.7
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcC-CCcEEEEee
Q 019445 7 IKIGINGF-GRIGRLVARVALQR-DDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~-p~~elv~i~ 37 (341)
+||-|.|+ |++|+.+++.|.++ +..+++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~ 35 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLYGTENVIASD 35 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEE
T ss_pred ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEc
Confidence 58999999 99999999999876 346676664
No 368
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=79.56 E-value=1.5 Score=39.59 Aligned_cols=31 Identities=26% Similarity=0.332 Sum_probs=25.1
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
++|-|.|+ |+||+.+++.|.++. +++.+...
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g--~~v~~~~~ 33 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN--EIVVIDNL 33 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS--CEEEECCC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC--CEEEEEcC
Confidence 48999999 999999999999887 55566443
No 369
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=79.40 E-value=1.7 Score=40.57 Aligned_cols=32 Identities=16% Similarity=0.209 Sum_probs=26.6
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEee
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~ 37 (341)
+++|.|.|+ |++|+.+++.|+++...+|+++.
T Consensus 32 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~ 64 (377)
T 2q1s_A 32 NTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVD 64 (377)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCceEEEEE
Confidence 368999999 99999999999887535777764
No 370
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=79.34 E-value=1.6 Score=39.64 Aligned_cols=30 Identities=30% Similarity=0.489 Sum_probs=25.6
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~~elv~i~ 37 (341)
++|-|.|+ |++|+.+++.|+++. .+++++.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~ 32 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQG-IDLIVFD 32 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred cEEEEeCCCchhHHHHHHHHHhCC-CEEEEEe
Confidence 48999999 999999999999875 5777764
No 371
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=79.20 E-value=0.91 Score=40.05 Aligned_cols=31 Identities=13% Similarity=0.119 Sum_probs=26.1
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEee
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~ 37 (341)
|.+|-|.|+ |.+|+.+++.|.++. .+++.+.
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~ 33 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLA-HEVRLSD 33 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTE-EEEEECC
T ss_pred CceEEEECCCCHHHHHHHHHHHhCC-CEEEEEe
Confidence 468999999 999999999998875 6766664
No 372
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=79.13 E-value=1.5 Score=41.16 Aligned_cols=30 Identities=20% Similarity=0.223 Sum_probs=24.8
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
..||+|+|+|.+|..+.+.|.+.. .+|...
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G-~~V~~~ 37 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAAN-HSVFGY 37 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTT-CCEEEE
T ss_pred CCEEEEEeecHHHHHHHHHHHHCC-CEEEEE
Confidence 468999999999999999998775 565544
No 373
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=79.09 E-value=1.2 Score=40.06 Aligned_cols=30 Identities=23% Similarity=0.537 Sum_probs=24.0
Q ss_pred eEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 8 KIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 8 rV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
||+|+|+|.+|..+++.|.+.. .++. +.++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g-~~V~-~~~~ 31 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHG-YPLI-IYDV 31 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTT-CCEE-EECS
T ss_pred eEEEEeccHHHHHHHHHHHHCC-CEEE-EEeC
Confidence 7999999999999999998765 4554 4444
No 374
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=78.74 E-value=1.6 Score=40.42 Aligned_cols=29 Identities=24% Similarity=0.320 Sum_probs=23.7
Q ss_pred eEEEEccCHHHHHHHHHHHcCCCc-EEEEee
Q 019445 8 KIGINGFGRIGRLVARVALQRDDV-ELVAVN 37 (341)
Q Consensus 8 rV~I~G~G~iG~~llr~l~~~p~~-elv~i~ 37 (341)
+|.|+|+|-+|..+++++.... . +++++.
T Consensus 170 ~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~ 199 (348)
T 2d8a_A 170 SVLITGAGPLGLLGIAVAKASG-AYPVIVSE 199 (348)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 6999999999999999887765 4 666654
No 375
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=78.69 E-value=2.3 Score=39.71 Aligned_cols=31 Identities=13% Similarity=0.282 Sum_probs=25.3
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
-+|.|+|+|-+|...++++.... .+++++..
T Consensus 191 ~~VlV~G~G~vG~~a~qla~~~G-a~Vi~~~~ 221 (363)
T 3uog_A 191 DRVVVQGTGGVALFGLQIAKATG-AEVIVTSS 221 (363)
T ss_dssp CEEEEESSBHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CEEEEEec
Confidence 47999999999999999887765 58777653
No 376
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=78.58 E-value=3 Score=38.30 Aligned_cols=32 Identities=16% Similarity=0.143 Sum_probs=23.6
Q ss_pred CCccEEEecCCCccCHHHHHHHHhCCCcEEEe
Q 019445 95 TGAEYVVESTGVFTDKDKAAAHLKGGAKKVVI 126 (341)
Q Consensus 95 ~~~DvV~~at~~~~s~~~~~~~l~~G~k~V~l 126 (341)
.++|+||+|+|...+.+.+-.+++.|-+.+.+
T Consensus 228 ~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 228 RFNQLILETAGVPQTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp CSSEEEEECSCSHHHHHHHHHHCCTTCEEEEC
T ss_pred CCcccccccccccchhhhhhheecCCeEEEEE
Confidence 47899999999877777776777666654443
No 377
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=78.50 E-value=2.3 Score=39.88 Aligned_cols=31 Identities=23% Similarity=0.413 Sum_probs=23.4
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
-+|.|+|+|-+|...++++....--+++++.
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~ 225 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKTAGASRIIGID 225 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCSCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEc
Confidence 3799999999999999888765422566664
No 378
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=78.47 E-value=1.5 Score=42.28 Aligned_cols=28 Identities=32% Similarity=0.541 Sum_probs=23.7
Q ss_pred eEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 8 KIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 8 rV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
||+|+|+|++|..+...|.++. .+++.+
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G-~~V~~~ 29 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARG-HEVIGV 29 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTT-CEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHCC-CEEEEE
Confidence 8999999999999999998875 466555
No 379
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=78.46 E-value=18 Score=35.58 Aligned_cols=33 Identities=18% Similarity=0.342 Sum_probs=29.2
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
-.||+|-|+|.+|..+++.|.+.. ..+++|.|.
T Consensus 244 g~tVaVQG~GNVG~~aa~~L~e~G-akVVavsDs 276 (501)
T 3mw9_A 244 DKTFVVQGFGNVGLHSMRYLHRFG-AKCITVGES 276 (501)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-CEEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEEcC
Confidence 368999999999999999998875 899999875
No 380
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=78.45 E-value=1.2 Score=41.60 Aligned_cols=30 Identities=27% Similarity=0.227 Sum_probs=23.4
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcE-EEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVE-LVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~e-lv~i~ 37 (341)
-+|.|+|+|-+|...++++.... .+ ++++.
T Consensus 181 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 211 (363)
T 3m6i_A 181 DPVLICGAGPIGLITMLCAKAAG-ACPLVITD 211 (363)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT-CCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 36999999999999999887765 55 55553
No 381
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=78.43 E-value=1.2 Score=41.81 Aligned_cols=30 Identities=27% Similarity=0.506 Sum_probs=24.1
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
-+|.|+|+|-+|...++++.... .+++++.
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~G-a~Vi~~~ 225 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAMG-AHVVAFT 225 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 37999999999999999887665 6766654
No 382
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=78.29 E-value=1.7 Score=40.43 Aligned_cols=37 Identities=24% Similarity=0.206 Sum_probs=25.0
Q ss_pred CCCCCceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 1 MAGDKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 1 ~~~~~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
|+....-||||+|+|.+|+.++..++++. +++ .+.|.
T Consensus 1 Ma~p~~~~VaViGaG~MG~giA~~~a~~G-~~V-~l~D~ 37 (319)
T 3ado_A 1 MASPAAGDVLIVGSGLVGRSWAMLFASGG-FRV-KLYDI 37 (319)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHTT-CCE-EEECS
T ss_pred CCCCCCCeEEEECCcHHHHHHHHHHHhCC-CeE-EEEEC
Confidence 66655568999999999999999888875 554 34454
No 383
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=78.19 E-value=2.3 Score=37.97 Aligned_cols=36 Identities=14% Similarity=0.167 Sum_probs=27.5
Q ss_pred CCCCceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 2 AGDKKIKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 2 ~~~~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
..+|+.+|.|+|+|..|...+..|.++. ++++-+..
T Consensus 11 ~~~~~~~vvIIG~G~aGl~aA~~l~~~g-~~v~lie~ 46 (323)
T 3f8d_A 11 KPGEKFDVIIVGLGPAAYGAALYSARYM-LKTLVIGE 46 (323)
T ss_dssp CTTCEEEEEEECCSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred cCCCccCEEEECccHHHHHHHHHHHHCC-CcEEEEec
Confidence 3344679999999999999999888764 56655543
No 384
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=78.08 E-value=1.5 Score=43.04 Aligned_cols=32 Identities=22% Similarity=0.306 Sum_probs=25.2
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
+.||||+|+|.+|..++..+.+.. ++++.. |.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG-~~V~l~-D~ 36 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHG-HQVLLY-DI 36 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT-CCEEEE-CS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC-CeEEEE-EC
Confidence 458999999999999999998765 455443 44
No 385
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=77.81 E-value=1.8 Score=39.52 Aligned_cols=30 Identities=23% Similarity=0.225 Sum_probs=25.4
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~~elv~i~ 37 (341)
++|-|.|+ |.+|+.+++.|.++. .+++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 33 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLEAG-YLPVVID 33 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 58999999 999999999998875 5666664
No 386
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=77.41 E-value=4.2 Score=37.56 Aligned_cols=30 Identities=20% Similarity=0.176 Sum_probs=23.7
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
-+|.|+|+|-+|...++++.... .+++++.
T Consensus 170 ~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~ 199 (352)
T 1e3j_A 170 TTVLVIGAGPIGLVSVLAAKAYG-AFVVCTA 199 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CEEEEEc
Confidence 37999999999999999887665 5655553
No 387
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=76.93 E-value=2.2 Score=38.70 Aligned_cols=30 Identities=23% Similarity=0.443 Sum_probs=25.7
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~~elv~i~ 37 (341)
++|-|.|+ |.||+.+++.|.++. .+++.+.
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~ 34 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEKG-YEVYGAD 34 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-CEEEEEE
Confidence 48999999 999999999999875 5777664
No 388
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=76.80 E-value=6.9 Score=37.74 Aligned_cols=34 Identities=24% Similarity=0.515 Sum_probs=29.8
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPF 40 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~~ 40 (341)
-.||+|-|+|.+|+.+++.|.+.. ..+|+|.|.+
T Consensus 221 g~~vaVqG~GnVG~~aa~~l~e~G-akVVavsD~~ 254 (424)
T 3k92_A 221 NARIIIQGFGNAGSFLAKFMHDAG-AKVIGISDAN 254 (424)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHT-CEEEEEECSS
T ss_pred cCEEEEECCCHHHHHHHHHHHHCC-CEEEEEECCC
Confidence 368999999999999999998764 7999999873
No 389
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=76.80 E-value=2 Score=41.84 Aligned_cols=31 Identities=16% Similarity=0.170 Sum_probs=24.9
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
.|.+|+|+|.||+|.-+.-.+.+.. ++++++
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G-~~V~g~ 50 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLG-HRVVGY 50 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHT-CEEEEE
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCC-CcEEEE
Confidence 3569999999999998888777654 577776
No 390
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=76.33 E-value=3 Score=34.83 Aligned_cols=30 Identities=23% Similarity=0.378 Sum_probs=24.9
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEee
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~ 37 (341)
||||-|.|+ |.+|+.+++.|. +. .+++.+.
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~g-~~V~~~~ 33 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-KK-AEVITAG 33 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-TT-SEEEEEE
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-CC-CeEEEEe
Confidence 357999999 999999999998 64 6776664
No 391
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=76.32 E-value=1.7 Score=40.57 Aligned_cols=31 Identities=19% Similarity=0.450 Sum_probs=24.5
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
-+|.|+|+|-+|...++++.... .+++++..
T Consensus 182 ~~VlV~GaG~vG~~a~qlak~~G-a~Vi~~~~ 212 (357)
T 2cf5_A 182 LRGGILGLGGVGHMGVKIAKAMG-HHVTVISS 212 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CeEEEEeC
Confidence 37999999999999999887665 57666654
No 392
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=76.31 E-value=2.2 Score=41.84 Aligned_cols=32 Identities=19% Similarity=0.356 Sum_probs=27.3
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
++||.|.|+ |++|+.+++.|.++. .+|+++.-
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G-~~V~~l~R 179 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGG-HEVIQLVR 179 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 468999999 999999999999886 57777754
No 393
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=76.18 E-value=2.3 Score=38.04 Aligned_cols=29 Identities=28% Similarity=0.390 Sum_probs=25.2
Q ss_pred eEEEEcc-CHHHHHHHHHHHcCCCcEEEEee
Q 019445 8 KIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 8 rV~I~G~-G~iG~~llr~l~~~p~~elv~i~ 37 (341)
||-|.|+ |++|+.+++.|.++. .+++++.
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 31 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVELG-YEVVVVD 31 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred EEEEECCCChHHHHHHHHHHhCC-CEEEEEe
Confidence 7999999 999999999999886 5776664
No 394
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=76.09 E-value=1.8 Score=41.65 Aligned_cols=31 Identities=32% Similarity=0.731 Sum_probs=26.1
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
..+|.|+|+|++|+.+++.|.++. .+++.|.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g-~~vvvId 34 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSG-VKMVVLD 34 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CCEEEEE
Confidence 357999999999999999998875 6777774
No 395
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=76.08 E-value=6.7 Score=36.71 Aligned_cols=23 Identities=30% Similarity=0.388 Sum_probs=20.6
Q ss_pred eeEEEEccCHHHHHHHHHHHcCC
Q 019445 7 IKIGINGFGRIGRLVARVALQRD 29 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p 29 (341)
.||.|+|+|-+|.+++..|....
T Consensus 119 ~~VlvvG~GglGs~va~~La~aG 141 (353)
T 3h5n_A 119 AKVVILGCGGIGNHVSVILATSG 141 (353)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT
T ss_pred CeEEEECCCHHHHHHHHHHHhCC
Confidence 58999999999999999998754
No 396
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=76.06 E-value=2.4 Score=42.05 Aligned_cols=31 Identities=42% Similarity=0.654 Sum_probs=25.9
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
.+|||+|+|.||+.+++.|.... +++++. |+
T Consensus 143 ~~vgIIG~G~IG~~vA~~l~~~G-~~V~~~-d~ 173 (529)
T 1ygy_A 143 KTVGVVGLGRIGQLVAQRIAAFG-AYVVAY-DP 173 (529)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEE-CT
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC-CEEEEE-CC
Confidence 68999999999999999998775 677655 44
No 397
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=75.88 E-value=2.1 Score=39.33 Aligned_cols=31 Identities=32% Similarity=0.430 Sum_probs=26.0
Q ss_pred eEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 8 KIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 8 rV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
||-|.|+ |+||+.+++.|++++..+++.+..
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r 33 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK 33 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEec
Confidence 7999999 999999999998864567777643
No 398
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=75.87 E-value=2.5 Score=38.95 Aligned_cols=30 Identities=27% Similarity=0.446 Sum_probs=24.3
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
-+|.|.|+|-+|..+++++.... .+++++.
T Consensus 166 ~~VlV~GaG~vG~~~~~~a~~~G-a~Vi~~~ 195 (339)
T 1rjw_A 166 EWVAIYGIGGLGHVAVQYAKAMG-LNVVAVD 195 (339)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CEEEEEe
Confidence 47999999779999999988775 5776664
No 399
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=75.84 E-value=2.4 Score=39.05 Aligned_cols=31 Identities=16% Similarity=0.275 Sum_probs=24.2
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
|.+||+|+|+|.+|..+.+.|.+.. .++..+
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G-~~V~~~ 43 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENG-EEVILW 43 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCC-CeEEEE
Confidence 3579999999999999999988764 355444
No 400
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=75.60 E-value=2.4 Score=40.48 Aligned_cols=27 Identities=26% Similarity=0.352 Sum_probs=23.3
Q ss_pred eEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 8 KIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 8 rV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
||+|+|+|++|..+...|.+ . .+++.+
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G-~~V~~~ 28 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-Q-NEVTIV 28 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-T-SEEEEE
T ss_pred EEEEECCCHHHHHHHHHHhC-C-CEEEEE
Confidence 89999999999999998887 4 676665
No 401
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=75.50 E-value=4.9 Score=37.56 Aligned_cols=31 Identities=6% Similarity=-0.019 Sum_probs=25.4
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
-+|.|+|+ |-+|...++++.... .+++++.+
T Consensus 166 ~~VlV~Ga~G~vG~~a~qla~~~G-a~Vi~~~~ 197 (371)
T 3gqv_A 166 VYVLVYGGSTATATVTMQMLRLSG-YIPIATCS 197 (371)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred cEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 47999999 999999999887765 57777753
No 402
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=75.32 E-value=2.4 Score=41.55 Aligned_cols=30 Identities=13% Similarity=0.299 Sum_probs=24.8
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
.+||+|+|+|++|..+...|.+.. .+++.+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G-~~V~~~ 37 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIG-HDVFCL 37 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CceEEEECcCHHHHHHHHHHHhCC-CEEEEE
Confidence 469999999999999999998765 466555
No 403
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=75.26 E-value=3.7 Score=38.38 Aligned_cols=30 Identities=13% Similarity=0.222 Sum_probs=24.0
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCc-EEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDV-ELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~-elv~i~ 37 (341)
-+|.|+|+|-+|...++++.... . +++++.
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 227 (376)
T 1e3i_A 197 STCAVFGLGCVGLSAIIGCKIAG-ASRIIAID 227 (376)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 37999999999999999887765 5 666653
No 404
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=75.11 E-value=2 Score=39.61 Aligned_cols=31 Identities=23% Similarity=0.341 Sum_probs=25.2
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
-+|.|+|+|-+|...++++.... .+++++..
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~ 198 (340)
T 3s2e_A 168 QWVVISGIGGLGHVAVQYARAMG-LRVAAVDI 198 (340)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CeEEEEeC
Confidence 37999999989999999888775 58777743
No 405
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=75.08 E-value=2.7 Score=38.04 Aligned_cols=32 Identities=16% Similarity=0.304 Sum_probs=26.8
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
++||-|.|+ |++|+.+++.|.++. .+++++..
T Consensus 14 ~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r 46 (335)
T 1rpn_A 14 TRSALVTGITGQDGAYLAKLLLEKG-YRVHGLVA 46 (335)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCeEEEECCCChHHHHHHHHHHHCC-CeEEEEeC
Confidence 479999999 999999999999875 57777754
No 406
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=74.97 E-value=2.8 Score=39.24 Aligned_cols=35 Identities=17% Similarity=0.124 Sum_probs=27.1
Q ss_pred CCCCCceeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 1 MAGDKKIKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 1 ~~~~~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
|++ ++.+|.|+|+|.+|..++..|.++. ++++-+.
T Consensus 1 M~~-~~~~V~IVGaG~aGl~~A~~L~~~G-~~v~v~E 35 (397)
T 2vou_A 1 MSP-TTDRIAVVGGSISGLTAALMLRDAG-VDVDVYE 35 (397)
T ss_dssp -CC-CCSEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CCC-CCCcEEEECCCHHHHHHHHHHHhCC-CCEEEEe
Confidence 653 3579999999999999999988875 6665554
No 407
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=74.93 E-value=2.2 Score=38.72 Aligned_cols=30 Identities=20% Similarity=0.198 Sum_probs=24.7
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+|-|+|+|.+|...++.|++.. .+++.|.
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~G-a~VtVia 43 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPTG-CKLTLVS 43 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGGT-CEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhCC-CEEEEEc
Confidence 68999999999999999999876 4554443
No 408
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=74.84 E-value=1.4 Score=43.61 Aligned_cols=22 Identities=27% Similarity=0.410 Sum_probs=20.1
Q ss_pred eeEEEEccCHHHHHHHHHHHcC
Q 019445 7 IKIGINGFGRIGRLVARVALQR 28 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~ 28 (341)
.||||+|+|.+|..+++.|...
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s 76 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDS 76 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHH
T ss_pred CEEEEEeEhHHHHHHHHHHHhc
Confidence 4899999999999999998875
No 409
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=74.68 E-value=3.4 Score=38.55 Aligned_cols=30 Identities=13% Similarity=0.210 Sum_probs=23.3
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCc-EEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDV-ELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~-elv~i~ 37 (341)
-+|.|+|+|-+|...++++.... . +++++.
T Consensus 193 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 223 (373)
T 1p0f_A 193 STCAVFGLGGVGFSAIVGCKAAG-ASRIIGVG 223 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCeEEEEC
Confidence 37999999999999998877654 4 565653
No 410
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=74.65 E-value=2.2 Score=38.98 Aligned_cols=29 Identities=17% Similarity=0.227 Sum_probs=23.4
Q ss_pred eEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 8 KIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 8 rV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
||+|+|+|.+|..+.+.|.+.. .++..+.
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g-~~V~~~~ 30 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNG-NEVRIWG 30 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHC-CEEEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCC-CeEEEEE
Confidence 8999999999999999987654 3555553
No 411
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=74.50 E-value=2.3 Score=38.69 Aligned_cols=33 Identities=18% Similarity=0.409 Sum_probs=26.4
Q ss_pred CceeEEEEcc-CHHHHHHHHHHHcCCC------cEEEEee
Q 019445 5 KKIKIGINGF-GRIGRLVARVALQRDD------VELVAVN 37 (341)
Q Consensus 5 ~~irV~I~G~-G~iG~~llr~l~~~p~------~elv~i~ 37 (341)
++++|-|.|+ |+||+.+++.|.++.. .+++.+.
T Consensus 13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~ 52 (342)
T 2hrz_A 13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLID 52 (342)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEE
T ss_pred cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEE
Confidence 3468999999 9999999999988753 4666654
No 412
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=74.27 E-value=2.1 Score=41.90 Aligned_cols=31 Identities=10% Similarity=0.128 Sum_probs=24.9
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
+||||+|+|.+|..+++.|.++. +++. +.++
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G-~~V~-v~dr 33 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHG-FVVC-AFNR 33 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT-CCEE-EECS
T ss_pred CeEEEEChHHHHHHHHHHHHHCC-CeEE-EEeC
Confidence 58999999999999999998875 4654 4444
No 413
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=74.23 E-value=2.6 Score=38.66 Aligned_cols=31 Identities=10% Similarity=0.055 Sum_probs=26.4
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
++|-|.|+ |++|+.+++.|.++. .+++++..
T Consensus 10 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 41 (357)
T 1rkx_A 10 KRVFVTGHTGFKGGWLSLWLQTMG-ATVKGYSL 41 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHhCC-CeEEEEeC
Confidence 68999999 999999999999876 57777653
No 414
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=74.22 E-value=2.6 Score=39.18 Aligned_cols=30 Identities=27% Similarity=0.329 Sum_probs=24.2
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCc-EEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDV-ELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~-elv~i~ 37 (341)
-+|.|+|+|-+|...++++.... . +++++.
T Consensus 173 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 203 (356)
T 1pl8_A 173 HKVLVCGAGPIGMVTLLVAKAMG-AAQVVVTD 203 (356)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CSEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 37999999999999999887665 5 666664
No 415
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=74.14 E-value=2.8 Score=35.96 Aligned_cols=35 Identities=26% Similarity=0.266 Sum_probs=25.9
Q ss_pred CCCCCceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEee
Q 019445 1 MAGDKKIKIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 1 ~~~~~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~ 37 (341)
|..|. .+|-|.|+ |.||+.+++.|.++. .+++.+.
T Consensus 1 M~~~~-k~vlVtGasggiG~~~a~~l~~~G-~~V~~~~ 36 (234)
T 2ehd_A 1 MEGMK-GAVLITGASRGIGEATARLLHAKG-YRVGLMA 36 (234)
T ss_dssp ---CC-CEEEESSTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCCCC-CEEEEECCCcHHHHHHHHHHHHCC-CEEEEEE
Confidence 66644 57999999 999999999999876 5665553
No 416
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=74.05 E-value=2.8 Score=38.81 Aligned_cols=29 Identities=21% Similarity=0.316 Sum_probs=24.5
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
+||.|+|+|.+|..++..|.++. ++++-+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G-~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHG-IKVTIY 30 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCC-CCEEEE
Confidence 59999999999999999998875 666555
No 417
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=73.89 E-value=3.1 Score=41.06 Aligned_cols=29 Identities=14% Similarity=0.188 Sum_probs=24.9
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
.+|+|+|+|.||+.+++.+.... +++...
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~G-~~V~v~ 306 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGLG-ATVWVT 306 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEE
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEEE
Confidence 58999999999999999998875 776554
No 418
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=73.76 E-value=2.8 Score=39.06 Aligned_cols=32 Identities=19% Similarity=0.206 Sum_probs=26.0
Q ss_pred CceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEee
Q 019445 5 KKIKIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 5 ~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+.+|-|.|+ |+||+.+++.|+++. .+|+++.
T Consensus 10 ~~~~vlVTG~tGfIG~~l~~~L~~~G-~~V~~~~ 42 (404)
T 1i24_A 10 HGSRVMVIGGDGYCGWATALHLSKKN-YEVCIVD 42 (404)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhCC-CeEEEEE
Confidence 3579999999 999999999998875 5777664
No 419
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=73.75 E-value=2.8 Score=38.74 Aligned_cols=30 Identities=27% Similarity=0.368 Sum_probs=23.0
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcC-CCc-EEEEe
Q 019445 7 IKIGINGF-GRIGRLVARVALQR-DDV-ELVAV 36 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~-p~~-elv~i 36 (341)
+||+|+|+ |.+|..++.+|..+ +-. ||+-+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~ 33 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLY 33 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEE
Confidence 38999996 99999999988775 533 45444
No 420
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=73.60 E-value=2.9 Score=38.66 Aligned_cols=32 Identities=25% Similarity=0.207 Sum_probs=24.1
Q ss_pred CceeEEEEcc-CHHHHHHHHHHHcCCC-cEEEEe
Q 019445 5 KKIKIGINGF-GRIGRLVARVALQRDD-VELVAV 36 (341)
Q Consensus 5 ~~irV~I~G~-G~iG~~llr~l~~~p~-~elv~i 36 (341)
+++||+|+|+ |++|..++..|.+.+. -||+.+
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~ 40 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLY 40 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEE
Confidence 4579999996 9999999998877653 245444
No 421
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=73.49 E-value=3.3 Score=36.68 Aligned_cols=30 Identities=30% Similarity=0.585 Sum_probs=26.1
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.||-|.|+ |++|+.+++.|.++. .+++++.
T Consensus 13 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 43 (292)
T 1vl0_A 13 MKILITGANGQLGREIQKQLKGKN-VEVIPTD 43 (292)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSS-EEEEEEC
T ss_pred ceEEEECCCChHHHHHHHHHHhCC-CeEEecc
Confidence 68999999 999999999999875 6777764
No 422
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=73.44 E-value=5.7 Score=37.00 Aligned_cols=30 Identities=17% Similarity=0.281 Sum_probs=24.0
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCc-EEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDV-ELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~-elv~i~ 37 (341)
-+|.|+|+|-+|..+++++.... . +++++.
T Consensus 193 ~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~ 223 (374)
T 2jhf_A 193 STCAVFGLGGVGLSVIMGCKAAG-AARIIGVD 223 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 37999999999999999887765 4 566664
No 423
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=73.41 E-value=2.6 Score=37.22 Aligned_cols=31 Identities=16% Similarity=0.219 Sum_probs=25.0
Q ss_pred CceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEe
Q 019445 5 KKIKIGINGF-GRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 5 ~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i 36 (341)
+|.+|-|-|+ |.||+.+++.|.++. .+++.+
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G-~~V~~~ 33 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMA-EILRLA 33 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGE-EEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcC-CEEEEE
Confidence 4468999999 999999999999875 455544
No 424
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=73.29 E-value=2.7 Score=38.48 Aligned_cols=32 Identities=28% Similarity=0.300 Sum_probs=25.5
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
|.|||++|.|.+|..+++.|.+.. +++. +.++
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~G-~~v~-v~dr 34 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKAG-YLLN-VFDL 34 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTT-CEEE-EECS
T ss_pred cCEEEEeeehHHHHHHHHHHHhCC-CeEE-EEcC
Confidence 359999999999999999998875 4554 4454
No 425
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=73.25 E-value=3.6 Score=37.40 Aligned_cols=31 Identities=23% Similarity=0.391 Sum_probs=26.5
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
++|-|.|+ |.||+.+++.|.++. .+++++..
T Consensus 21 ~~vlVTGasG~iG~~l~~~L~~~g-~~V~~~~r 52 (330)
T 2pzm_A 21 MRILITGGAGCLGSNLIEHWLPQG-HEILVIDN 52 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHGGGT-CEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 68999999 999999999999876 67777653
No 426
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=75.50 E-value=0.71 Score=39.76 Aligned_cols=29 Identities=24% Similarity=0.237 Sum_probs=23.1
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEE
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVA 35 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~ 35 (341)
.+||+|+|+|.+|+.+++.|.+.. .++..
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~G-~~V~~ 47 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQCG-YSVVF 47 (201)
Confidence 468999999999999999987764 44433
No 427
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=73.04 E-value=3.6 Score=40.05 Aligned_cols=32 Identities=28% Similarity=0.484 Sum_probs=25.8
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
+.||+|+|+|.+|..++..+.++. ++++.+ |.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G-~~V~l~-D~ 68 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVG-ISVVAV-ES 68 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTT-CEEEEE-CS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCC-CeEEEE-EC
Confidence 468999999999999999998875 566544 44
No 428
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=73.04 E-value=4.6 Score=41.89 Aligned_cols=31 Identities=29% Similarity=0.518 Sum_probs=25.0
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
.||||+|+|.+|+.++..+.+.. ++++-. |.
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG-~~V~l~-D~ 347 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVG-ISVVAV-ES 347 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEE-CS
T ss_pred cEEEEEcccHHHHHHHHHHHhCC-Cchhcc-cc
Confidence 58999999999999999888875 665443 44
No 429
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=72.93 E-value=3.2 Score=37.69 Aligned_cols=30 Identities=17% Similarity=0.223 Sum_probs=25.2
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~~elv~i~ 37 (341)
++|-|-|+ |+||+.+++.|+++. .+++++.
T Consensus 10 ~~vlVTGatGfIG~~l~~~Ll~~G-~~V~~~~ 40 (338)
T 2rh8_A 10 KTACVVGGTGFVASLLVKLLLQKG-YAVNTTV 40 (338)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCchHHHHHHHHHHHHCC-CEEEEEE
Confidence 68999999 999999999998875 5666644
No 430
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=72.56 E-value=2.8 Score=39.81 Aligned_cols=36 Identities=19% Similarity=0.366 Sum_probs=28.0
Q ss_pred CCCCC-ceeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 1 MAGDK-KIKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 1 ~~~~~-~irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
|.+|| +.||+|+|.|..|+.+++.+.+.. ++++.+.
T Consensus 18 ~~~mm~~~~I~ilGgG~lg~~l~~aa~~lG-~~v~~~d 54 (403)
T 3k5i_A 18 QGHMWNSRKVGVLGGGQLGRMLVESANRLN-IQVNVLD 54 (403)
T ss_dssp ---CCSCCEEEEECCSHHHHHHHHHHHHHT-CEEEEEE
T ss_pred eccCCCCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEE
Confidence 34554 479999999999999999998875 7877776
No 431
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=72.42 E-value=4.3 Score=35.71 Aligned_cols=36 Identities=25% Similarity=0.252 Sum_probs=27.4
Q ss_pred CCCCCc-eeEEEEcc-CHHHHHHHHHHHcCCCcEEEEee
Q 019445 1 MAGDKK-IKIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 1 ~~~~~~-irV~I~G~-G~iG~~llr~l~~~p~~elv~i~ 37 (341)
|++|++ .++-|.|+ |.||+.+++.|.++. .+++.+.
T Consensus 1 M~~m~~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~ 38 (267)
T 2gdz_A 1 MAHMVNGKVALVTGAAQGIGRAFAEALLLKG-AKVALVD 38 (267)
T ss_dssp -CCCCTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCcccCCCEEEEECCCCcHHHHHHHHHHHCC-CEEEEEE
Confidence 666543 57899999 999999999999886 5665543
No 432
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=72.40 E-value=3.6 Score=33.70 Aligned_cols=30 Identities=13% Similarity=0.174 Sum_probs=24.7
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+|.|+|+|.+|.+++..|.+.. .+++-+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g-~~v~lie 31 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAG-LKVLVLD 31 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHCC-CcEEEEe
Confidence 68999999999999999998764 5555554
No 433
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=72.17 E-value=2.9 Score=38.26 Aligned_cols=23 Identities=22% Similarity=0.449 Sum_probs=20.5
Q ss_pred eeEEEEccCHHHHHHHHHHHcCC
Q 019445 7 IKIGINGFGRIGRLVARVALQRD 29 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p 29 (341)
.||.|+|+|-+|.+++..|....
T Consensus 37 ~~VlVvGaGGlGs~va~~La~aG 59 (292)
T 3h8v_A 37 FAVAIVGVGGVGSVTAEMLTRCG 59 (292)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT
T ss_pred CeEEEECcCHHHHHHHHHHHHcC
Confidence 68999999999999999987654
No 434
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=72.09 E-value=4.1 Score=37.91 Aligned_cols=30 Identities=17% Similarity=0.256 Sum_probs=23.6
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCc-EEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDV-ELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~-elv~i~ 37 (341)
-+|.|+|+|-+|...++++.... . +++++.
T Consensus 192 ~~VlV~GaG~vG~~avqla~~~G-a~~Vi~~~ 222 (373)
T 2fzw_A 192 SVCAVFGLGGVGLAVIMGCKVAG-ASRIIGVD 222 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 37999999999999999887664 4 566654
No 435
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=72.08 E-value=2.5 Score=41.33 Aligned_cols=31 Identities=19% Similarity=0.425 Sum_probs=24.8
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
+||||+|+|.+|..+++.|.++. +++. +.++
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G-~~V~-v~dr 32 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKG-FKVA-VFNR 32 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT-CCEE-EECS
T ss_pred CEEEEEChHHHHHHHHHHHHHCC-CEEE-EEeC
Confidence 37999999999999999998875 4554 4444
No 436
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=72.06 E-value=2.9 Score=39.70 Aligned_cols=37 Identities=27% Similarity=0.187 Sum_probs=25.8
Q ss_pred CCCCCceeEEEEccCHHHHHHHHHHHcC-----CCcEEEEeeC
Q 019445 1 MAGDKKIKIGINGFGRIGRLVARVALQR-----DDVELVAVND 38 (341)
Q Consensus 1 ~~~~~~irV~I~G~G~iG~~llr~l~~~-----p~~elv~i~~ 38 (341)
|+.| +.+|+|+|+|.+|...+..|.+. |+.+++-+..
T Consensus 1 M~~~-~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa 42 (470)
T 3i6d_A 1 MSDG-KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEA 42 (470)
T ss_dssp -----CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECS
T ss_pred CCCC-CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEEC
Confidence 6654 47999999999999998888765 3466666644
No 437
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=71.88 E-value=2 Score=40.12 Aligned_cols=30 Identities=20% Similarity=0.139 Sum_probs=23.2
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCc-EEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDV-ELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~-elv~i~ 37 (341)
-+|.|+|+|-+|...++++.... . +++++.
T Consensus 192 ~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~ 222 (371)
T 1f8f_A 192 SSFVTWGAGAVGLSALLAAKVCG-ASIIIAVD 222 (371)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHT-CSEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCeEEEEC
Confidence 37999999999999998877654 4 566664
No 438
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=71.67 E-value=3.1 Score=38.67 Aligned_cols=33 Identities=21% Similarity=0.239 Sum_probs=26.0
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCc-EEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDV-ELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~-elv~i~~~ 39 (341)
.+||+|+|+|.+|..++..|...+-+ || .+.|.
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el-~l~D~ 42 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEI-GIVDI 42 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEE-EEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeE-EEEeC
Confidence 47999999999999999998887654 44 44454
No 439
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=71.54 E-value=3.6 Score=36.59 Aligned_cols=31 Identities=19% Similarity=0.333 Sum_probs=25.5
Q ss_pred eEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 8 KIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 8 rV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
||-|.|+ |++|+.+++.|+++...+++++..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r 32 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDN 32 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEEC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEcc
Confidence 5889999 999999999999876456666653
No 440
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=71.54 E-value=6.8 Score=36.46 Aligned_cols=30 Identities=17% Similarity=0.296 Sum_probs=24.0
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCc-EEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDV-ELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~-elv~i~ 37 (341)
-+|.|+|+|-+|...++++.... . +++++.
T Consensus 194 ~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~ 224 (374)
T 1cdo_A 194 STCAVFGLGAVGLAAVMGCHSAG-AKRIIAVD 224 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEEc
Confidence 37999999999999999887765 4 566653
No 441
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=71.31 E-value=9.6 Score=37.25 Aligned_cols=84 Identities=19% Similarity=0.199 Sum_probs=49.7
Q ss_pred eeEEEEccCHHHHH-HHHHHHcCCCcEEEEeeCCCCChhhhhhhcccccccCcccCceeeecCCcceEECCEEEEEEecC
Q 019445 7 IKIGINGFGRIGRL-VARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFR 85 (341)
Q Consensus 7 irV~I~G~G~iG~~-llr~l~~~p~~elv~i~~~~~~~~~~a~ll~~ds~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 85 (341)
.||.|+|.|.+|.. ++|+|.++. .++ .+.|.... .....| . +. | +.++...
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~~G-~~V-~~~D~~~~-~~~~~l----------~------~~-------g--i~~~~g~ 74 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLANEG-YQI-SGSDLAPN-SVTQHL----------T------AL-------G--AQIYFHH 74 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTT-CEE-EEECSSCC-HHHHHH----------H------HT-------T--CEEESSC
T ss_pred CEEEEEEEcHhhHHHHHHHHHhCC-CeE-EEEECCCC-HHHHHH----------H------HC-------C--CEEECCC
Confidence 58999999999996 899999886 454 45564222 111111 0 00 1 1222222
Q ss_pred CCCCCCccCCCccEEEecCCCccCHHHHHHHHhCCCc
Q 019445 86 NPEEIPWAKTGAEYVVESTGVFTDKDKAAAHLKGGAK 122 (341)
Q Consensus 86 ~~~~~~w~~~~~DvV~~at~~~~s~~~~~~~l~~G~k 122 (341)
+++.+ .++|+|+-+.+...+.....++.++|.+
T Consensus 75 ~~~~~----~~~d~vV~Spgi~~~~p~~~~a~~~gi~ 107 (494)
T 4hv4_A 75 RPENV----LDASVVVVSTAISADNPEIVAAREARIP 107 (494)
T ss_dssp CGGGG----TTCSEEEECTTSCTTCHHHHHHHHTTCC
T ss_pred CHHHc----CCCCEEEECCCCCCCCHHHHHHHHCCCC
Confidence 34433 3689999888776655555566666764
No 442
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=71.28 E-value=4.1 Score=35.04 Aligned_cols=34 Identities=18% Similarity=0.073 Sum_probs=28.3
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
.+.|+.|+|+|--|+++++.|.+. .+++++.-|.
T Consensus 11 ~~k~v~IiGAGg~g~~v~~~l~~~-~~~~vgfiDd 44 (220)
T 4ea9_A 11 AIGGVVIIGGGGHAKVVIESLRAC-GETVAAIVDA 44 (220)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHT-TCCEEEEECS
T ss_pred CCCCEEEEcCCHHHHHHHHHHHhC-CCEEEEEEeC
Confidence 346899999999999999999874 5888888764
No 443
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=71.25 E-value=3.8 Score=38.60 Aligned_cols=31 Identities=26% Similarity=0.542 Sum_probs=27.5
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
.+|+|.|+|.+|+.+++.|.+.. .+|+ +.|.
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~G-akVv-vsD~ 206 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEAG-AQLL-VADT 206 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEE-EEeC
Confidence 68999999999999999998885 7888 7776
No 444
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=71.24 E-value=3.4 Score=42.09 Aligned_cols=32 Identities=16% Similarity=0.219 Sum_probs=26.8
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
+++|-|.|+ |.||+.+++.|+++. .+|+++..
T Consensus 11 ~~~ilVTGatG~IG~~l~~~L~~~G-~~V~~~~r 43 (699)
T 1z45_A 11 SKIVLVTGGAGYIGSHTVVELIENG-YDCVVADN 43 (699)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCc-CEEEEEEC
Confidence 468999999 999999999999876 57777643
No 445
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=71.16 E-value=4.2 Score=36.44 Aligned_cols=29 Identities=24% Similarity=0.436 Sum_probs=24.9
Q ss_pred eEEEEcc-CHHHHHHHHHHHcCCCcEEEEee
Q 019445 8 KIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 8 rV~I~G~-G~iG~~llr~l~~~p~~elv~i~ 37 (341)
||-|.|+ |.||+.+++.|.++. .+++.+.
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~ 31 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLARG-LEVAVLD 31 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred EEEEEeCCcHHHHHHHHHHHHCC-CEEEEEE
Confidence 7999999 999999999999875 5776664
No 446
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=70.96 E-value=3.8 Score=36.01 Aligned_cols=31 Identities=19% Similarity=0.088 Sum_probs=25.5
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
+.+|.|+|+|..|...+..|.++. ++++-+.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g-~~v~lie 32 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRAR-KNILLVD 32 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC-CCEEEEe
Confidence 479999999999999999988765 5665554
No 447
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=70.94 E-value=2.2 Score=39.67 Aligned_cols=30 Identities=27% Similarity=0.454 Sum_probs=24.1
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
-+|.|+|+|-+|..+++++.... .+++++.
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~G-a~Vi~~~ 210 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAMG-AETYVIS 210 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEc
Confidence 37999999999999999887664 5766665
No 448
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=70.92 E-value=3.7 Score=37.75 Aligned_cols=30 Identities=23% Similarity=0.352 Sum_probs=25.5
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~~elv~i~ 37 (341)
++|-|.|+ |.||+.+++.|.++. .+++.+.
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 32 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKG-YEVHGIK 32 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-CEEEEEE
Confidence 48999999 999999999998876 5776664
No 449
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=70.85 E-value=3.8 Score=37.47 Aligned_cols=32 Identities=25% Similarity=0.232 Sum_probs=26.7
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCC----cEEEEeeC
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDD----VELVAVND 38 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~----~elv~i~~ 38 (341)
+||-|.|+ |++|+.+++.|.++.. .+++++..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r 38 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVAR 38 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeC
Confidence 48999999 9999999999988753 67777754
No 450
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=70.78 E-value=4 Score=36.64 Aligned_cols=32 Identities=22% Similarity=0.444 Sum_probs=26.4
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
+++|-|.|+ |+||+.+++.|.++. .+++++..
T Consensus 12 ~~~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r 44 (321)
T 2pk3_A 12 SMRALITGVAGFVGKYLANHLTEQN-VEVFGTSR 44 (321)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred cceEEEECCCChHHHHHHHHHHHCC-CEEEEEec
Confidence 478999999 999999999998875 57777643
No 451
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=70.68 E-value=4.2 Score=39.45 Aligned_cols=33 Identities=33% Similarity=0.596 Sum_probs=29.8
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
-.||+|.|+|-+|+.+++.|.+.. ..+++|.|.
T Consensus 235 g~~vaVqGfGnVG~~~a~~L~e~G-akvVavsD~ 267 (440)
T 3aog_A 235 GARVAIQGFGNVGNAAARAFHDHG-ARVVAVQDH 267 (440)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-CEEEEEECS
T ss_pred CCEEEEeccCHHHHHHHHHHHHCC-CEEEEEEcC
Confidence 368999999999999999999875 899999986
No 452
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=70.32 E-value=3.3 Score=38.01 Aligned_cols=34 Identities=12% Similarity=-0.016 Sum_probs=26.6
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
..+|+|+|+|.+|+.+++.|.....++-+.+.++
T Consensus 135 ~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr 168 (312)
T 2i99_A 135 SEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNR 168 (312)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECS
T ss_pred CcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 4689999999999999999876523645566665
No 453
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=70.31 E-value=4.4 Score=34.89 Aligned_cols=30 Identities=17% Similarity=0.316 Sum_probs=25.2
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+|-|.|+ |.||+.+++.|.++. .+++.+.
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g-~~V~~~~ 32 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAG-HTVIGID 32 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCC-CEEEEEe
Confidence 47999999 999999999999875 5666664
No 454
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=70.15 E-value=4.4 Score=38.19 Aligned_cols=30 Identities=23% Similarity=0.231 Sum_probs=23.7
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCc-EEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDV-ELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~-elv~i~ 37 (341)
-+|.|+|+|-+|...++++.... . +++++.
T Consensus 187 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 217 (398)
T 2dph_A 187 SHVYIAGAGPVGRCAAAGARLLG-AACVIVGD 217 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CSEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEEc
Confidence 37999999999999998877654 5 666664
No 455
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=70.08 E-value=3.2 Score=38.09 Aligned_cols=31 Identities=13% Similarity=0.198 Sum_probs=25.3
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
-+|.|.|+ |-+|...++++.... .+++++..
T Consensus 150 ~~vlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~ 181 (334)
T 3qwb_A 150 DYVLLFAAAGGVGLILNQLLKMKG-AHTIAVAS 181 (334)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 47999997 999999999888765 57777654
No 456
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=70.02 E-value=3.9 Score=39.64 Aligned_cols=31 Identities=16% Similarity=0.261 Sum_probs=25.4
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
.+|+|+|+|.||+.+++.|.... ++++. .++
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~G-a~Viv-~D~ 242 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFG-ARVVV-TEV 242 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEE-ECS
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEE-ECC
Confidence 58999999999999999998775 66544 444
No 457
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=69.96 E-value=10 Score=34.40 Aligned_cols=30 Identities=17% Similarity=0.323 Sum_probs=22.4
Q ss_pred eeEEEEccCH-HHHHHHHHHHcCC-CcEEEEe
Q 019445 7 IKIGINGFGR-IGRLVARVALQRD-DVELVAV 36 (341)
Q Consensus 7 irV~I~G~G~-iG~~llr~l~~~p-~~elv~i 36 (341)
.++.|+|+|. +|+.+.++|.+.. ...+.-.
T Consensus 159 k~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~ 190 (281)
T 2c2x_A 159 AHVVVIGRGVTVGRPLGLLLTRRSENATVTLC 190 (281)
T ss_dssp CEEEEECCCTTTHHHHHHHHTSTTTCCEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 5899999975 6999999998873 3554433
No 458
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=69.96 E-value=6 Score=36.00 Aligned_cols=31 Identities=19% Similarity=0.332 Sum_probs=25.2
Q ss_pred eEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 8 KIGINGF-GRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 8 rV~I~G~-G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
+|.|.|+ |-+|..+++++.... .+++++...
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~ 183 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRG-YTVEASTGK 183 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT-CCEEEEESC
T ss_pred eEEEecCCCHHHHHHHHHHHHCC-CEEEEEECC
Confidence 6999999 999999999887765 577666543
No 459
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=69.82 E-value=5.1 Score=37.60 Aligned_cols=31 Identities=29% Similarity=0.484 Sum_probs=27.1
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
.||+|+|.|.+|+.+++.+.+.. ++++.+..
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~G-~~vi~~d~ 45 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEMG-YKIAVLDP 45 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CEEEEEeC
Confidence 58999999999999999998875 88888853
No 460
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=69.56 E-value=3.2 Score=40.89 Aligned_cols=33 Identities=15% Similarity=0.246 Sum_probs=26.2
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
|..||||+|+|.+|..+++.|.++. ++|.. .++
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G-~~V~v-~dr 41 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHG-FTVCA-YNR 41 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTT-CCEEE-ECS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCC-CEEEE-EeC
Confidence 3479999999999999999998875 56544 444
No 461
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=69.56 E-value=4 Score=39.74 Aligned_cols=29 Identities=14% Similarity=0.210 Sum_probs=24.2
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
.+|+|+|+|.||+.+++.+.... ++++..
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafG-a~Viv~ 276 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAG-ARVKVT 276 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEE
Confidence 58999999999999999998775 665543
No 462
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=69.36 E-value=2.5 Score=39.43 Aligned_cols=31 Identities=26% Similarity=0.267 Sum_probs=25.2
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
-+|.|+|+|-+|..+++++.... .+++++..
T Consensus 182 ~~VlV~GaG~vG~~~~q~a~~~G-a~Vi~~~~ 212 (366)
T 2cdc_A 182 RKVLVVGTGPIGVLFTLLFRTYG-LEVWMANR 212 (366)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEEeC
Confidence 47999999999999999887765 47776654
No 463
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=69.19 E-value=3.2 Score=40.78 Aligned_cols=29 Identities=17% Similarity=0.226 Sum_probs=24.5
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
.+|+|+|+|.||+.+++.+.... ++++..
T Consensus 258 ktVgIIG~G~IG~~vA~~l~~~G-~~Viv~ 286 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSMKGLG-ARVYIT 286 (479)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHT-CEEEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHhCc-CEEEEE
Confidence 58999999999999999998764 676555
No 464
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=69.16 E-value=2.5 Score=39.75 Aligned_cols=31 Identities=16% Similarity=0.264 Sum_probs=24.7
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
-+|.|+|+|-+|...++++....-.+++++.
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~ 227 (380)
T 1vj0_A 197 KTVVIQGAGPLGLFGVVIARSLGAENVIVIA 227 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBSEEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCceEEEEc
Confidence 3799999999999999988776523776665
No 465
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=69.07 E-value=3.9 Score=37.60 Aligned_cols=23 Identities=22% Similarity=0.361 Sum_probs=20.7
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCC
Q 019445 7 IKIGINGF-GRIGRLVARVALQRD 29 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p 29 (341)
+||+|+|+ |++|..++..|...+
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~ 24 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSP 24 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCT
T ss_pred CEEEEECCCChHHHHHHHHHHhCC
Confidence 38999999 999999999998775
No 466
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=68.81 E-value=4.2 Score=39.24 Aligned_cols=31 Identities=23% Similarity=0.290 Sum_probs=25.4
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
-+|.|.|+ |-+|...++++.... .+++++..
T Consensus 230 ~~VlV~GasG~vG~~avqlak~~G-a~vi~~~~ 261 (456)
T 3krt_A 230 DNVLIWGASGGLGSYATQFALAGG-ANPICVVS 261 (456)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC-CeEEEEEC
Confidence 37999999 999999999887765 67777653
No 467
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=68.70 E-value=3.9 Score=36.88 Aligned_cols=32 Identities=13% Similarity=0.208 Sum_probs=26.2
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.+.+|.|+|+|..|..++..|.++. ++++-+.
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~g-~~v~vie 33 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRSG-LSYVILD 33 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHSS-CCEEEEC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCC-CCEEEEE
Confidence 4579999999999999999998774 6665554
No 468
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=68.49 E-value=3.9 Score=36.26 Aligned_cols=30 Identities=27% Similarity=0.210 Sum_probs=24.5
Q ss_pred eEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 8 KIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 8 rV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
||+|+|+|.+|+.+++.|.+.. +++ .+.++
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g-~~v-~v~~r 147 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAG-LEV-WVWNR 147 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCE-EEECS
T ss_pred eEEEECCcHHHHHHHHHHHHCC-CEE-EEEEC
Confidence 8999999999999999998876 454 45454
No 469
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=68.49 E-value=3.9 Score=36.27 Aligned_cols=28 Identities=25% Similarity=0.323 Sum_probs=24.2
Q ss_pred eEEEEcc-CHHHHHHHHHHHcCCCcEEEEee
Q 019445 8 KIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 8 rV~I~G~-G~iG~~llr~l~~~p~~elv~i~ 37 (341)
||-|.|+ |++|+.+++.|. + ..+++++.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-g~~V~~~~ 30 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-VGNLIALD 30 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-TSEEEEEC
T ss_pred eEEEECCCCHHHHHHHHHhh-c-CCeEEEec
Confidence 7999999 999999999998 5 46777764
No 470
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=68.49 E-value=4.5 Score=37.79 Aligned_cols=30 Identities=27% Similarity=0.360 Sum_probs=24.8
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~~elv~i~ 37 (341)
-+|.|.|+ |-+|..+++++.... .+++++.
T Consensus 185 ~~VlV~Ga~G~vG~~~~qla~~~G-a~Vi~~~ 215 (375)
T 2vn8_A 185 KRVLILGASGGVGTFAIQVMKAWD-AHVTAVC 215 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-CEEEEEe
Confidence 47999997 999999999887765 5777665
No 471
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=68.41 E-value=5.1 Score=38.57 Aligned_cols=34 Identities=32% Similarity=0.581 Sum_probs=29.5
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
..||+|.|+|-+|+.++++|.++....+++|.|.
T Consensus 209 g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~ 242 (415)
T 2tmg_A 209 KATVAVQGFGNVGQFAALLISQELGSKVVAVSDS 242 (415)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred CCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeC
Confidence 3689999999999999999987235899999986
No 472
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=68.38 E-value=2.6 Score=37.78 Aligned_cols=32 Identities=22% Similarity=0.228 Sum_probs=26.0
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
+.+|.|+|+|..|...+..|.++. ++++-+..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g-~~v~lie~ 38 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQ-ASVKIIES 38 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT-CCEEEECS
T ss_pred cceEEEECCCHHHHHHHHHHHHCC-CCEEEEEc
Confidence 478999999999999999888764 67666644
No 473
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=68.35 E-value=4.7 Score=38.04 Aligned_cols=31 Identities=19% Similarity=0.489 Sum_probs=27.1
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
.+|+|.|+|.+|+.+++.|.+.. .+++ +.|.
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~G-akVv-v~D~ 204 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEG-AKLV-VTDV 204 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEE-EEcC
Confidence 58999999999999999999886 6877 7675
No 474
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=68.02 E-value=4.8 Score=36.76 Aligned_cols=30 Identities=30% Similarity=0.381 Sum_probs=22.9
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCCc-EEEEe
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDDV-ELVAV 36 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~~-elv~i 36 (341)
+||+|+|+ |.+|..++..|...+.+ |++-+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~ 32 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFV 32 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEE
Confidence 38999995 99999999988766533 45444
No 475
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=67.87 E-value=3.3 Score=37.63 Aligned_cols=30 Identities=20% Similarity=0.304 Sum_probs=25.1
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
-+|.|+|+|.+|...++++.... .+++++.
T Consensus 144 ~~VlV~GaG~vG~~a~qlak~~G-a~Vi~~~ 173 (315)
T 3goh_A 144 REVLIVGFGAVNNLLTQMLNNAG-YVVDLVS 173 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CEEEEEE
Confidence 47999999999999999887665 5887776
No 476
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=67.76 E-value=4.5 Score=36.77 Aligned_cols=30 Identities=17% Similarity=0.331 Sum_probs=25.1
Q ss_pred eEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 8 KIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 8 rV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
+|.|.|+ |-+|...++++.... .+++++..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~G-a~Vi~~~~ 179 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLG-YQVAAVSG 179 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred eEEEECCCcHHHHHHHHHHHHcC-CEEEEEeC
Confidence 4999999 999999999888775 57777764
No 477
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=67.55 E-value=4.4 Score=37.94 Aligned_cols=25 Identities=32% Similarity=0.343 Sum_probs=20.6
Q ss_pred CceeEEEEcc-CHHHHHHHHHHHcCC
Q 019445 5 KKIKIGINGF-GRIGRLVARVALQRD 29 (341)
Q Consensus 5 ~~irV~I~G~-G~iG~~llr~l~~~p 29 (341)
.+.||+|+|+ |++|..++-.+...+
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g 32 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMR 32 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcC
Confidence 3579999998 999999987776554
No 478
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=67.41 E-value=4.9 Score=36.71 Aligned_cols=33 Identities=18% Similarity=0.233 Sum_probs=25.9
Q ss_pred CCceeEEEEccCHHHHHHHHHHHcCCCc-EEEEee
Q 019445 4 DKKIKIGINGFGRIGRLVARVALQRDDV-ELVAVN 37 (341)
Q Consensus 4 ~~~irV~I~G~G~iG~~llr~l~~~p~~-elv~i~ 37 (341)
|++.+|.|+|+|..|..+++.|.++. . +++-+.
T Consensus 2 m~~~~vvIIGaG~aGl~aA~~l~~~g-~~~v~lie 35 (369)
T 3d1c_A 2 MQHHKVAIIGAGAAGIGMAITLKDFG-ITDVIILE 35 (369)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTT-CCCEEEEC
T ss_pred CccCcEEEECcCHHHHHHHHHHHHcC-CCcEEEEe
Confidence 34579999999999999999988764 4 555554
No 479
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=67.26 E-value=3.4 Score=38.17 Aligned_cols=31 Identities=13% Similarity=0.241 Sum_probs=24.8
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
-+|.|+|+ |-+|...++++.... .+++++..
T Consensus 152 ~~VlV~gg~G~vG~~a~qla~~~G-a~Vi~~~~ 183 (346)
T 3fbg_A 152 KTLLIINGAGGVGSIATQIAKAYG-LRVITTAS 183 (346)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEECC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcC-CEEEEEeC
Confidence 47999976 999999999888665 58777754
No 480
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=67.09 E-value=4.9 Score=37.63 Aligned_cols=32 Identities=19% Similarity=0.082 Sum_probs=26.0
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
..++|.|+|+|.+|..++..|.++. ++++-+.
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G-~~V~v~E 53 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSG-IDCDVYE 53 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC-CCEEEEe
Confidence 3579999999999999999998875 6665554
No 481
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=66.69 E-value=5.3 Score=36.00 Aligned_cols=33 Identities=18% Similarity=0.181 Sum_probs=25.7
Q ss_pred CceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 5 KKIKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 5 ~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
++.+|.|+|+|..|...+..|.++. ++++-+..
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g-~~v~lie~ 36 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRG-LSFRFVDP 36 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCC-CCEEEEeC
Confidence 3579999999999999998887654 56655543
No 482
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=66.54 E-value=4.4 Score=37.40 Aligned_cols=34 Identities=18% Similarity=0.116 Sum_probs=28.3
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
..+++|+|+|.+|+..++.|.....++.+.|.++
T Consensus 125 ~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r 158 (322)
T 1omo_A 125 SSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDV 158 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECS
T ss_pred CCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECC
Confidence 4689999999999999999887434777788876
No 483
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=66.53 E-value=6.9 Score=34.19 Aligned_cols=36 Identities=17% Similarity=0.121 Sum_probs=27.5
Q ss_pred CCCCCceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEee
Q 019445 1 MAGDKKIKIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 1 ~~~~~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~ 37 (341)
|..+...++-|-|+ |.||+.+++.|.++. .+++.+.
T Consensus 1 M~~l~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~ 37 (256)
T 2d1y_A 1 MGLFAGKGVLVTGGARGIGRAIAQAFAREG-ALVALCD 37 (256)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 55554567999999 999999999999886 5665543
No 484
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=66.21 E-value=5.3 Score=36.16 Aligned_cols=29 Identities=21% Similarity=0.362 Sum_probs=24.8
Q ss_pred eEEEEcc-CHHHHHHHHHHHcCCCcEEEEee
Q 019445 8 KIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 8 rV~I~G~-G~iG~~llr~l~~~p~~elv~i~ 37 (341)
||-|.|+ |.||+.+++.|.++. .+++.+.
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~ 31 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNG-HDVIILD 31 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 7999999 999999999998875 5776664
No 485
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=66.04 E-value=16 Score=33.03 Aligned_cols=31 Identities=23% Similarity=0.263 Sum_probs=24.1
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
.++.|+|+|-+|+.+++.|.+..--+|..++
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~ 157 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQQPASITVTN 157 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CEEEEECchHHHHHHHHHHHhcCCCeEEEEE
Confidence 5899999999999999999887522554443
No 486
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=65.88 E-value=5.9 Score=35.79 Aligned_cols=31 Identities=26% Similarity=0.401 Sum_probs=25.3
Q ss_pred eEEEEcc-CHHHHHHHHHHHcC--CC---cEEEEeeC
Q 019445 8 KIGINGF-GRIGRLVARVALQR--DD---VELVAVND 38 (341)
Q Consensus 8 rV~I~G~-G~iG~~llr~l~~~--p~---~elv~i~~ 38 (341)
||-|.|+ |.+|+.+++.|+++ +. .+++.+..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r 38 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDS 38 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEEC
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEEC
Confidence 7999999 99999999998874 24 67777753
No 487
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=65.77 E-value=6.2 Score=36.25 Aligned_cols=31 Identities=6% Similarity=0.017 Sum_probs=25.3
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
-+|.|.|+ |-+|..+++++.... .+++++..
T Consensus 168 ~~vlV~Gasg~iG~~~~~~a~~~G-~~Vi~~~~ 199 (343)
T 2eih_A 168 DDVLVMAAGSGVSVAAIQIAKLFG-ARVIATAG 199 (343)
T ss_dssp CEEEECSTTSTTHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-CEEEEEeC
Confidence 47999999 999999999988775 57766643
No 488
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=65.61 E-value=5.7 Score=39.89 Aligned_cols=36 Identities=14% Similarity=0.151 Sum_probs=27.7
Q ss_pred CCCCceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 2 AGDKKIKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 2 ~~~~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
.+|+..+|.|+|+|.+|..++..|.++. ++++-|..
T Consensus 19 ~~M~~~DVvIVGgG~AGl~aA~~Lar~G-~~V~LiEr 54 (591)
T 3i3l_A 19 SHMTRSKVAIIGGGPAGSVAGLTLHKLG-HDVTIYER 54 (591)
T ss_dssp -CCCCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CcCCCCCEEEECcCHHHHHHHHHHHcCC-CCEEEEcC
Confidence 3444579999999999999999888875 67666643
No 489
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=65.60 E-value=3 Score=38.38 Aligned_cols=31 Identities=26% Similarity=0.340 Sum_probs=24.8
Q ss_pred eeEEEEcc-CHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 7 IKIGINGF-GRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 7 irV~I~G~-G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
-+|.|.|+ |-+|...++++.... .+++++..
T Consensus 146 ~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~ 177 (340)
T 3gms_A 146 DVLLVNACGSAIGHLFAQLSQILN-FRLIAVTR 177 (340)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHT-CEEEEEES
T ss_pred CEEEEeCCccHHHHHHHHHHHHcC-CEEEEEeC
Confidence 47999999 699999999887665 57777654
No 490
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=65.56 E-value=4.6 Score=36.37 Aligned_cols=31 Identities=19% Similarity=0.216 Sum_probs=25.2
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEee
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~ 37 (341)
+.+|.|+|+|.+|..++..|.++. ++++-+.
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G-~~V~vlE 32 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAG-HQVHLFD 32 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CceEEEECCcHHHHHHHHHHHHCC-CcEEEEE
Confidence 368999999999999999998875 5655554
No 491
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=65.45 E-value=3.4 Score=35.75 Aligned_cols=29 Identities=17% Similarity=0.126 Sum_probs=23.7
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
..+|.|+|+|++|+.+++.|.++. . ++.+
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g-~-v~vi 37 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSE-V-FVLA 37 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSE-E-EEEE
T ss_pred CCEEEEECCChHHHHHHHHHHhCC-e-EEEE
Confidence 358999999999999999998775 4 5555
No 492
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=65.30 E-value=5.8 Score=35.03 Aligned_cols=36 Identities=19% Similarity=0.153 Sum_probs=27.6
Q ss_pred CCCCCceeEEEEcc-CHHHHHHHHHHHcCCCcEEEEee
Q 019445 1 MAGDKKIKIGINGF-GRIGRLVARVALQRDDVELVAVN 37 (341)
Q Consensus 1 ~~~~~~irV~I~G~-G~iG~~llr~l~~~p~~elv~i~ 37 (341)
|..++..++-|-|+ |.||+.+++.|.++. .+++.+.
T Consensus 1 m~~~~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~ 37 (278)
T 1spx_A 1 MTRFAEKVAIITGSSNGIGRATAVLFAREG-AKVTITG 37 (278)
T ss_dssp -CTTTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEe
Confidence 65555567889999 999999999999876 5665553
No 493
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=65.24 E-value=5.9 Score=38.62 Aligned_cols=30 Identities=23% Similarity=0.216 Sum_probs=25.0
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEe
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAV 36 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i 36 (341)
+.||||+|+|.+|..++..+.+.. ++++..
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG-~~V~l~ 83 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAG-IETFLV 83 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CeEEEE
Confidence 368999999999999999998875 666554
No 494
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=65.05 E-value=5.1 Score=36.73 Aligned_cols=32 Identities=25% Similarity=0.176 Sum_probs=25.2
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
-+|.|+|+|-+|...+.++......+++++..
T Consensus 165 ~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~ 196 (348)
T 4eez_A 165 DWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDI 196 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTSCCEEEEEES
T ss_pred CEEEEEcCCCccHHHHHHHHHhCCCEEEEEEC
Confidence 37999999999998888887665578777754
No 495
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=65.03 E-value=6.4 Score=37.45 Aligned_cols=33 Identities=18% Similarity=0.138 Sum_probs=27.2
Q ss_pred eeEEEEccCHHHHHHHHHHHc-CCCcEEEEeeCC
Q 019445 7 IKIGINGFGRIGRLVARVALQ-RDDVELVAVNDP 39 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~-~p~~elv~i~~~ 39 (341)
.||.|+|+|+.|...++.|.+ .++++|+-|...
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~ 36 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDR 36 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCC
Confidence 489999999999999988876 367888877643
No 496
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=64.88 E-value=3.4 Score=37.01 Aligned_cols=33 Identities=15% Similarity=0.247 Sum_probs=27.0
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
+.+|.|+|+|.+|..++..|.+++.++++-|..
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk 71 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQ 71 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEES
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEEC
Confidence 468999999999999999998865577766653
No 497
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=64.72 E-value=5.8 Score=38.40 Aligned_cols=31 Identities=10% Similarity=0.215 Sum_probs=25.0
Q ss_pred eeEEEEccCHHHHHHHHHHHcCCCcEEEEeeCC
Q 019445 7 IKIGINGFGRIGRLVARVALQRDDVELVAVNDP 39 (341)
Q Consensus 7 irV~I~G~G~iG~~llr~l~~~p~~elv~i~~~ 39 (341)
.+|+|+|+|.||+.+++.|.... ++++. .+.
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~G-a~Viv-~D~ 251 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMG-SIVYV-TEI 251 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEE-ECS
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEE-EeC
Confidence 58999999999999999998775 66544 443
No 498
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=64.67 E-value=4.5 Score=38.53 Aligned_cols=32 Identities=34% Similarity=0.475 Sum_probs=26.2
Q ss_pred ceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 6 KIKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 6 ~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
+.+|.|+|+|.+|..+...|.++. ++++-+..
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G-~~V~viE~ 53 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHD-VDVTVYTD 53 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCCEEEECCcHHHHHHHHHHHHCC-CeEEEEcC
Confidence 368999999999999999998886 67666654
No 499
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=64.60 E-value=6.8 Score=33.52 Aligned_cols=32 Identities=13% Similarity=0.184 Sum_probs=25.9
Q ss_pred ceeEEEEcc-CHHHHHHHHHHHcCCC-cEEEEee
Q 019445 6 KIKIGINGF-GRIGRLVARVALQRDD-VELVAVN 37 (341)
Q Consensus 6 ~irV~I~G~-G~iG~~llr~l~~~p~-~elv~i~ 37 (341)
+.+|-|.|+ |.||+.+++.|.++.. .+++.+.
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~ 36 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATA 36 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEE
T ss_pred CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEe
Confidence 357999999 9999999999998863 5666554
No 500
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=64.45 E-value=3.9 Score=39.37 Aligned_cols=37 Identities=22% Similarity=0.225 Sum_probs=30.0
Q ss_pred CCCCCceeEEEEccCHHHHHHHHHHHcCCCcEEEEeeC
Q 019445 1 MAGDKKIKIGINGFGRIGRLVARVALQRDDVELVAVND 38 (341)
Q Consensus 1 ~~~~~~irV~I~G~G~iG~~llr~l~~~p~~elv~i~~ 38 (341)
|.-+||.||.|.|.|.++..++|.+.+.. ++++.+..
T Consensus 1 m~~~~~k~ILI~g~g~~~~~i~~a~~~~G-~~vv~v~~ 37 (461)
T 2dzd_A 1 METRRIRKVLVANRGEIAIRVFRACTELG-IRTVAIYS 37 (461)
T ss_dssp --CCCCSEEEECSCHHHHHHHHHHHHHHT-CEEEEEEC
T ss_pred CCCCcCcEEEEECCcHHHHHHHHHHHHcC-CEEEEEEC
Confidence 77777889999999999999999988765 78888864
Done!