BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019446
(341 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LXV5|NFYA1_ARATH Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana
GN=NFYA1 PE=2 SV=1
Length = 272
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 128/252 (50%), Gaps = 41/252 (16%)
Query: 26 ISSQPWWRGVGHDSTSRAMLQGGIGNISSPREPINGVLVAKTSKSQVNSGMDGGADAT-K 84
+ ++PWW+ +A G N SS P NG + + ++G D T K
Sbjct: 24 MYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCP-NGSESNDVHSASEDGALNGENDGTWK 82
Query: 85 EMLMSVASQADGKFG--GQQPSQHSVSLMHPQFSEYLTQPSQLELVGHSIV--------- 133
+ + +S++ G G P+ S+ MH Q L QP ELVGH I
Sbjct: 83 DSQAATSSRSVDNHGMEGNDPAL-SIRNMHDQP---LVQPP--ELVGHYIACVPNPYQDP 136
Query: 134 ----------HPQ-----SMGVHSARMALPLEMAEEPVYVNAKQYHGILRRRQLRAKAEL 178
H Q +G+ R ALPL+MA+EPVYVNAKQY GILRRR+ RAKAEL
Sbjct: 137 YYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQYEGILRRRKARAKAEL 196
Query: 179 ERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQTSNGTVTNGTSLNVAVSTLP 238
ERK+I+ RKPYLHESRH HAMRRAR GGRF ++++ G G +T
Sbjct: 197 ERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEA----GEDAGGRDRERGSAT-- 250
Query: 239 PNSSKSESVATN 250
NSS SE V T+
Sbjct: 251 -NSSGSEQVETD 261
>sp|Q84JP1|NFYA7_ARATH Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana
GN=NFYA7 PE=2 SV=1
Length = 190
Score = 125 bits (315), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 74/105 (70%)
Query: 133 VHPQSMGVHSARMALPLEMAEEPVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHE 192
VH Q MGV + LP + EEPV+VNAKQYHGILRRRQ RA+ E + K+IK RKPYLHE
Sbjct: 79 VHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYHGILRRRQSRARLESQNKVIKSRKPYLHE 138
Query: 193 SRHLHAMRRARGCGGRFVNTKKLDSQTSNGTVTNGTSLNVAVSTL 237
SRHLHA+RR RGCGGRF+N KK D + + ++L+ S +
Sbjct: 139 SRHLHAIRRPRGCGGRFLNAKKEDEHHEDSSHEEKSNLSAGKSAM 183
>sp|Q9LVJ7|NFYA6_ARATH Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana
GN=NFYA6 PE=2 SV=1
Length = 308
Score = 125 bits (313), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/114 (55%), Positives = 82/114 (71%), Gaps = 6/114 (5%)
Query: 113 PQFSEYLTQPSQLELVGHSIVHPQSMGVHSARMALPLEMAE-EPVYVNAKQYHGILRRRQ 171
P F+ +L+ P + H++ HPQ G+ +RM LP + E EP++VNAKQY ILRRR+
Sbjct: 132 PHFNGFLSFPYASQ---HTVQHPQIRGLVPSRMPLPHNIPENEPIFVNAKQYQAILRRRE 188
Query: 172 LRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQTSNGTVT 225
RAK E + KLIKVRKPYLHESRHLHA++R RG GGRF+NTKK Q SN +++
Sbjct: 189 RRAKLEAQNKLIKVRKPYLHESRHLHALKRVRGSGGRFLNTKK--HQESNSSLS 240
>sp|Q945M9|NFYA9_ARATH Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana
GN=NFYA9 PE=2 SV=1
Length = 303
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/97 (63%), Positives = 70/97 (72%), Gaps = 6/97 (6%)
Query: 139 GVHSARMALPLEMAEEPVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHA 198
G+ +RM LP EMA+EPV+VNAKQY ILRRRQ RAKAELE+KLIK RKPYLHESRH HA
Sbjct: 151 GMPHSRMPLPPEMAQEPVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHA 210
Query: 199 MRRARGCGGRFVN------TKKLDSQTSNGTVTNGTS 229
MRR RG GGRF +K+ + SNG VT S
Sbjct: 211 MRRPRGTGGRFAKKTNTEASKRKAEEKSNGHVTQSPS 247
>sp|Q9SYH4|NFYA5_ARATH Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana
GN=NFYA5 PE=2 SV=1
Length = 308
Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/115 (55%), Positives = 79/115 (68%), Gaps = 16/115 (13%)
Query: 117 EYLTQPSQLELVGHSIVHPQSMGVHSARMALPLEMAE-EPVYVNAKQYHGILRRRQLRAK 175
EY + P+ L H + MG+ S+R+ LP + E EP++VNAKQYH ILRRR+ RAK
Sbjct: 147 EYASTPTALP-------HLEMMGLVSSRVPLPHHIQENEPIFVNAKQYHAILRRRKHRAK 199
Query: 176 AELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKL--------DSQTSNG 222
E + KLIK RKPYLHESRHLHA++RARG GGRF+NTKKL SQ +NG
Sbjct: 200 LEAQNKLIKCRKPYLHESRHLHALKRARGSGGRFLNTKKLQESSNSLCSSQMANG 254
>sp|Q9LNP6|NFYA8_ARATH Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana
GN=NFYA8 PE=2 SV=2
Length = 328
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 77/127 (60%), Gaps = 26/127 (20%)
Query: 94 ADGKFGGQQPSQHSVSLMHPQFSEYLTQPSQLELVGHSIVHPQSMGVHSARMALPLEMAE 153
AD FGG P+ YL Q + I +PQ R+ LP ++ E
Sbjct: 136 ADPHFGGLMPA------------AYLPQAT--------IWNPQM-----TRVPLPFDLIE 170
Query: 154 -EPVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNT 212
EPV+VNAKQ+H I+RRRQ RAK E + KLIK RKPYLHESRH+HA++R RG GGRF+NT
Sbjct: 171 NEPVFVNAKQFHAIMRRRQQRAKLEAQNKLIKARKPYLHESRHVHALKRPRGSGGRFLNT 230
Query: 213 KKLDSQT 219
KKL T
Sbjct: 231 KKLQEST 237
>sp|Q93ZH2|NFYA3_ARATH Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana
GN=NFYA3 PE=2 SV=2
Length = 340
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 65/82 (79%), Gaps = 1/82 (1%)
Query: 135 PQSMGVHSARMALPLEMAE-EPVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHES 193
PQ + + R+ LP E+ E +PV+VNAKQYH I+RRRQ RAK E + KLI+ RKPYLHES
Sbjct: 159 PQMVSMIPGRVPLPAELTETDPVFVNAKQYHAIMRRRQQRAKLEAQNKLIRARKPYLHES 218
Query: 194 RHLHAMRRARGCGGRFVNTKKL 215
RH+HA++R RG GGRF+NTKKL
Sbjct: 219 RHVHALKRPRGSGGRFLNTKKL 240
>sp|Q8LFU0|NFYAA_ARATH Nuclear transcription factor Y subunit A-10 OS=Arabidopsis thaliana
GN=NFYA10 PE=2 SV=2
Length = 269
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 99/201 (49%), Gaps = 32/201 (15%)
Query: 30 PWWRGVGHDSTSRAMLQG-------GIGNISSPREPINGVLVAKTSKSQVN---SGMDGG 79
PWW G + L G G+ +++ E GV+ +TS + G
Sbjct: 13 PWWNAFGSQPLTTESLSGEASDSFTGVKAVTTEAE--QGVVDKQTSTTLFTFSPGGEKSS 70
Query: 80 ADATKEMLMSVASQADGKFGGQQPSQHSVSLMHPQFSEYLTQPSQLELVGHSIVHPQSMG 139
D K + A +FG QP ++ HP +Y + +V
Sbjct: 71 RDVPKPHVAFAMQSACFEFGFAQPMMYT---KHPHVEQY-----------YGVVSAYGSQ 116
Query: 140 VHSARMALPLEMAEE---PVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHL 196
S R+ +PL+M E +YVN+KQYHGI+RRRQ RAKAE KL + RKPY+H SRHL
Sbjct: 117 RSSGRVMIPLKMETEEDGTIYVNSKQYHGIIRRRQSRAKAE---KLSRCRKPYMHHSRHL 173
Query: 197 HAMRRARGCGGRFVNTKKLDS 217
HAMRR RG GGRF+NTK D+
Sbjct: 174 HAMRRPRGSGGRFLNTKTADA 194
>sp|Q8VY64|NFYA4_ARATH Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana
GN=NFYA4 PE=2 SV=1
Length = 198
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 60/79 (75%)
Query: 136 QSMGVHSARMALPLEMAEEPVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRH 195
Q MG+ + L + EEPV+VNAKQYHGILRRRQ RAK E + IK +KPY+HESRH
Sbjct: 80 QLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILRRRQSRAKLEARNRAIKAKKPYMHESRH 139
Query: 196 LHAMRRARGCGGRFVNTKK 214
LHA+RR RGCGGRF+N KK
Sbjct: 140 LHAIRRPRGCGGRFLNAKK 158
>sp|Q9M9X4|NFYA2_ARATH Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana
GN=NFYA2 PE=2 SV=1
Length = 295
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 81/138 (58%), Gaps = 12/138 (8%)
Query: 136 QSMGVHSA-----RMALPLEMAEEP--VYVNAKQYHGILRRRQLRAKAE--LERKLI--K 184
Q GV SA R+ LPL M E +YVN+KQYHGI+RRRQ RAKA L++K + +
Sbjct: 111 QYYGVVSAYGSQSRVMLPLNMETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSR 170
Query: 185 VRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQTSNGTVTNGT-SLNVAVSTLPPNSSK 243
RKPY+H SRHLHA+RR RG GGRF+NTK + + S G S+ + P S+
Sbjct: 171 CRKPYMHHSRHLHALRRPRGSGGRFLNTKSQNLENSGTNAKKGDGSMQIQSQPKPQQSNS 230
Query: 244 SESVATNYSRGTADLSTG 261
S + GT +LS G
Sbjct: 231 QNSEVVHPENGTMNLSNG 248
>sp|P23708|NFYA_MOUSE Nuclear transcription factor Y subunit alpha OS=Mus musculus
GN=Nfya PE=1 SV=2
Length = 346
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Query: 144 RMALP-LEMAEE-PVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRR 201
R+ LP EM EE P+YVNAKQYH IL+RRQ RAK E E K+ K R+ YLHESRH HAM R
Sbjct: 250 RIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMAR 309
Query: 202 ARGCGGRFVNTKKLDS 217
RG GGRF + K+ DS
Sbjct: 310 KRGEGGRFFSPKEKDS 325
>sp|P23511|NFYA_HUMAN Nuclear transcription factor Y subunit alpha OS=Homo sapiens
GN=NFYA PE=1 SV=2
Length = 347
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Query: 144 RMALP-LEMAEE-PVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRR 201
R+ LP EM EE P+YVNAKQYH IL+RRQ RAK E E K+ K R+ YLHESRH HAM R
Sbjct: 251 RIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMAR 310
Query: 202 ARGCGGRFVNTKKLDS 217
RG GGRF + K+ DS
Sbjct: 311 KRGEGGRFFSPKEKDS 326
>sp|P18576|NFYA_RAT Nuclear transcription factor Y subunit alpha OS=Rattus norvegicus
GN=Nfya PE=1 SV=1
Length = 341
Score = 94.7 bits (234), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Query: 144 RMALP-LEMAEE-PVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRR 201
R+ LP EM EE P+YVNAKQYH IL+RRQ RAK E E K+ K R+ YLHESRH HAM R
Sbjct: 245 RIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMAR 304
Query: 202 ARGCGGRFVNTKKLDS 217
RG GGRF + K+ DS
Sbjct: 305 KRGEGGRFFSPKEKDS 320
>sp|Q5E9S2|NFYA_BOVIN Nuclear transcription factor Y subunit alpha OS=Bos taurus GN=NFYA
PE=2 SV=1
Length = 341
Score = 94.7 bits (234), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Query: 144 RMALP-LEMAEE-PVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRR 201
R+ LP EM EE P+YVNAKQYH IL+RRQ RAK E E K+ K R+ YLHESRH HAM R
Sbjct: 245 RIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMAR 304
Query: 202 ARGCGGRFVNTKKLDS 217
RG GGRF + K+ DS
Sbjct: 305 KRGEGGRFFSPKEKDS 320
>sp|Q54S29|NFYA_DICDI Nuclear transcription factor Y subunit alpha OS=Dictyostelium
discoideum GN=nfyA PE=3 SV=1
Length = 517
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 56/77 (72%), Gaps = 6/77 (7%)
Query: 143 ARMALPLEMAEEPVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRA 202
ARMA E+ EEP+YVNAKQY+ IL+RR RAK E E KL K RK Y HESRH HA+RR
Sbjct: 221 ARMA---EIVEEPLYVNAKQYNRILKRRAARAKLESENKLPKTRKAYQHESRHQHAIRRQ 277
Query: 203 RGCGGRFV---NTKKLD 216
RGCGGRF+ + KLD
Sbjct: 278 RGCGGRFLTKADQAKLD 294
>sp|P53768|HAP2_KLULA Transcriptional activator HAP2 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=HAP2 PE=3 SV=1
Length = 300
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 52/80 (65%)
Query: 136 QSMGVHSARMALPLEMAEEPVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRH 195
Q H + P E E+P YVNAKQY+ IL+RR RAK E K+ + R+PYLHESRH
Sbjct: 167 QRTKPHDMNIISPSEPLEQPFYVNAKQYYRILKRRYARAKLEENLKISRERRPYLHESRH 226
Query: 196 LHAMRRARGCGGRFVNTKKL 215
HAMRR RG GGRF+ ++
Sbjct: 227 KHAMRRPRGQGGRFLTAAEM 246
>sp|P06774|HAP2_YEAST Transcriptional activator HAP2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=HAP2 PE=1 SV=1
Length = 265
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 53/73 (72%)
Query: 151 MAEEPVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFV 210
+AE+P YVNAKQY+ IL+RR RAK E + ++ + RKPYLHESRH HAMRR RG GGRF+
Sbjct: 156 IAEQPFYVNAKQYYRILKRRYARAKLEEKLRISRERKPYLHESRHKHAMRRPRGEGGRFL 215
Query: 211 NTKKLDSQTSNGT 223
++ + S +
Sbjct: 216 TAAEIKAMKSKKS 228
>sp|P24488|HAP2_SCHPO Transcriptional activator hap2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=hap2 PE=3 SV=1
Length = 334
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 47/66 (71%), Gaps = 4/66 (6%)
Query: 154 EPV---YVNAKQYHGILRRRQLRAKAELE-RKLIKVRKPYLHESRHLHAMRRARGCGGRF 209
EPV YVNAKQYH IL+RR+ RAK E R + +KPYLHESRH HAMRR RG GGRF
Sbjct: 5 EPVEGLYVNAKQYHRILKRREARAKLEERLRGVQTTKKPYLHESRHKHAMRRPRGPGGRF 64
Query: 210 VNTKKL 215
+ K+
Sbjct: 65 LTADKV 70
>sp|A2BGG1|MTMRC_DANRE Myotubularin-related protein 12 OS=Danio rerio GN=mtmr12 PE=3 SV=1
Length = 736
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 262 CREVTEPQVHKMQQQQ----RCSNGNGQTY-YEGNG--NGCYSHHQGFQLFKCHSLPDNK 314
CR VTE + ++ Q+ + G + Y+G G C+SHH G LFK S P
Sbjct: 216 CRLVTENENFELSQRLPQYFVIPSALGDLFNYQGKGLPIWCWSHHSGCALFKA-SFPSMT 274
Query: 315 VEEGDF 320
E+GDF
Sbjct: 275 QEDGDF 280
>sp|Q318G0|HEM6_PROM9 Coproporphyrinogen-III oxidase, aerobic OS=Prochlorococcus marinus
(strain MIT 9312) GN=hemF PE=3 SV=1
Length = 342
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 155 PVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKK 214
P + + +H + +A ++++ L KV KP+ E L +RG GG F
Sbjct: 137 PYLSDVRNFH----KEHKKACEKVDKDLHKVFKPWCDEYFFLKHRNESRGIGGIFY---- 188
Query: 215 LDSQTSNGTVTNGTSLNVAVSTLPPNSSKS 244
D Q +G + G + N S + N KS
Sbjct: 189 -DYQDGSGNIYRGNNQNGEASKVSENIGKS 217
>sp|Q6NLL1|Y1411_DROME WD repeat-containing protein CG11141 OS=Drosophila melanogaster
GN=CG11141 PE=1 SV=1
Length = 710
Score = 32.3 bits (72), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 139 GVHSARMALPLEMAEEPVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHA 198
G H +++ P+E+ EPV NA++ + QL +E I V P ++R L
Sbjct: 412 GSHLSQLESPIELQAEPVLQNAEECFELSPVEQLNLNVPIE---IAVESPLTQQNRRLEI 468
Query: 199 MRR 201
RR
Sbjct: 469 FRR 471
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.126 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 125,835,850
Number of Sequences: 539616
Number of extensions: 5267313
Number of successful extensions: 10792
Number of sequences better than 100.0: 49
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 10746
Number of HSP's gapped (non-prelim): 69
length of query: 341
length of database: 191,569,459
effective HSP length: 118
effective length of query: 223
effective length of database: 127,894,771
effective search space: 28520533933
effective search space used: 28520533933
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)