Query 019447
Match_columns 341
No_of_seqs 281 out of 1565
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 16:13:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019447.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019447hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p5u_A Actinidin; SAD, cystein 100.0 7.4E-65 2.5E-69 463.2 23.0 217 13-234 1-218 (220)
2 1cqd_A Protein (protease II); 100.0 1.2E-64 4.3E-69 462.2 23.8 220 11-236 1-220 (221)
3 1s4v_A Cysteine endopeptidase; 100.0 1.6E-64 5.5E-69 463.9 23.9 223 12-238 1-224 (229)
4 2fo5_A Cysteine proteinase EP- 100.0 9.1E-65 3.1E-69 474.0 22.2 225 10-238 1-229 (262)
5 1ppo_A Protease omega; hydrola 100.0 3E-64 1E-68 458.2 24.1 215 13-233 1-215 (216)
6 1yal_A Chymopapain; hydrolase, 100.0 5.3E-64 1.8E-68 457.1 24.0 216 13-234 1-216 (218)
7 1iwd_A Ervatamin B; cysteine p 100.0 6.9E-64 2.4E-68 455.5 23.9 214 13-233 1-214 (215)
8 3u8e_A Papain-like cysteine pr 100.0 1.1E-63 3.6E-68 456.3 20.9 214 13-234 1-220 (222)
9 1pci_A Procaricain; zymogen, h 100.0 3.4E-63 1.2E-67 476.1 22.9 219 9-233 103-321 (322)
10 2cio_A Papain; hydrolase/inhib 100.0 7.8E-63 2.7E-67 447.6 23.3 211 13-233 1-211 (212)
11 3ioq_A CMS1MS2; caricaceae, cy 100.0 6.5E-63 2.2E-67 448.3 21.9 211 13-233 1-211 (213)
12 2b1m_A SPE31; papain-like, sug 100.0 1.9E-62 6.6E-67 454.6 24.1 221 12-240 1-231 (246)
13 2bdz_A Mexicain; cysteine prot 100.0 1.6E-62 5.3E-67 446.3 22.9 212 13-234 1-212 (214)
14 1o0e_A Ervatamin C; plant cyst 100.0 2.5E-62 8.7E-67 443.1 22.6 207 13-233 1-207 (208)
15 3kwz_A Cathepsin K; enzyme inh 100.0 3.7E-62 1.3E-66 443.6 23.5 212 13-233 1-215 (215)
16 3ovx_A Cathepsin S; hydrolase, 100.0 5.8E-62 2E-66 443.2 21.7 214 12-233 1-218 (218)
17 3tnx_A Papain; hydrolase, cyto 100.0 6.3E-62 2.2E-66 472.6 22.3 214 11-234 150-363 (363)
18 3f75_A Toxopain-2, cathepsin L 100.0 4.3E-62 1.5E-66 445.7 19.7 217 11-233 5-224 (224)
19 2oul_A Falcipain 2; cysteine p 100.0 1.1E-61 3.8E-66 448.2 21.6 217 8-233 13-240 (241)
20 2xu3_A Cathepsin L1; hydrolase 100.0 2.2E-61 7.5E-66 440.3 23.0 212 13-233 1-220 (220)
21 3bwk_A Cysteine protease falci 100.0 9.9E-62 3.4E-66 449.0 20.8 219 6-233 13-242 (243)
22 1by8_A Protein (procathepsin K 100.0 4.9E-61 1.7E-65 459.7 22.2 213 12-233 99-314 (314)
23 3i06_A Cruzipain; autocatalyti 100.0 6.5E-61 2.2E-65 435.8 21.7 208 13-233 1-214 (215)
24 8pch_A Cathepsin H; hydrolase, 100.0 4E-61 1.4E-65 438.3 20.3 212 13-234 1-219 (220)
25 2c0y_A Procathepsin S; proenzy 100.0 3.7E-61 1.3E-65 460.8 20.8 215 11-233 97-315 (315)
26 1m6d_A Cathepsin F, catsf; pap 100.0 9.9E-61 3.4E-65 434.3 22.5 208 13-233 1-213 (214)
27 3qj3_A Cathepsin L-like protei 100.0 7.1E-61 2.4E-65 461.4 21.9 213 11-233 114-331 (331)
28 3f5v_A DER P 1 allergen; aller 100.0 6.3E-61 2.2E-65 437.7 20.3 213 8-233 5-222 (222)
29 3qt4_A Cathepsin-L-like midgut 100.0 2.2E-60 7.5E-65 457.4 22.0 212 11-233 114-329 (329)
30 1cs8_A Human procathepsin L; p 100.0 2.4E-60 8.1E-65 455.4 20.9 214 11-233 95-316 (316)
31 1xkg_A DER P I, major mite fec 100.0 4.3E-60 1.5E-64 452.5 22.2 211 11-235 88-304 (312)
32 2o6x_A Procathepsin L1, secret 100.0 3.1E-60 1.1E-64 453.5 19.8 213 12-234 91-307 (310)
33 3hhi_A Cathepsin B-like cystei 100.0 7.8E-59 2.7E-63 446.2 18.7 215 11-238 70-317 (325)
34 1deu_A Procathepsin X; cystein 100.0 1.6E-56 5.4E-61 421.7 21.5 217 7-233 30-275 (277)
35 3cbj_A Cathepsin B; cathepsin 100.0 1.3E-56 4.5E-61 419.9 19.4 214 11-236 5-260 (266)
36 3qsd_A Cathepsin B-like peptid 100.0 2E-56 6.8E-61 415.9 19.4 209 12-232 2-252 (254)
37 3pdf_A Cathepsin C, dipeptidyl 100.0 8.2E-56 2.8E-60 439.8 23.8 213 9-233 203-435 (441)
38 3pbh_A Procathepsin B; thiol p 100.0 1.7E-56 5.8E-61 428.8 17.8 212 10-233 61-314 (317)
39 2wbf_X Serine-repeat antigen p 100.0 3.2E-51 1.1E-55 382.8 22.9 209 15-232 9-260 (265)
40 3ois_A Cysteine protease; alph 100.0 5.1E-48 1.7E-52 366.1 16.8 192 11-215 55-273 (291)
41 2cb5_A Protein (bleomycin hydr 100.0 2.6E-38 8.9E-43 313.1 17.5 208 11-233 46-423 (453)
42 2e01_A Cysteine proteinase 1; 100.0 2.2E-37 7.5E-42 306.8 19.4 207 12-233 52-424 (457)
43 3pw3_A Aminopeptidase C; bleom 100.0 1.5E-32 5E-37 266.9 19.5 184 24-214 21-356 (383)
44 2jye_A Granulin A; epithelin, 99.9 8.1E-27 2.8E-31 172.4 4.9 61 246-312 3-63 (72)
45 2jyv_A Granulin-2, granulin F; 99.9 7.1E-26 2.4E-30 167.4 1.9 58 247-310 4-62 (72)
46 2jyt_A Granulin-5, granulin C; 99.9 1.1E-24 3.9E-29 159.4 4.6 58 246-310 2-59 (69)
47 1fwo_A Oryzain beta chain; bet 99.5 1.6E-14 5.4E-19 91.8 3.0 34 247-280 2-35 (35)
48 1i8x_A Granulin-1; two beta-ha 99.2 2.6E-12 8.8E-17 78.8 1.8 29 247-280 2-30 (30)
49 1g26_A Granulin A, HGA; granul 99.2 1E-12 3.4E-17 81.6 -0.1 30 247-281 2-31 (31)
50 1pxv_A Cysteine protease; hydr 97.2 0.0044 1.5E-07 53.3 11.9 129 29-214 25-162 (183)
51 1x9y_A Cysteine proteinase; ha 97.0 0.0088 3E-07 56.6 13.4 128 29-213 201-337 (367)
52 1cv8_A Staphopain; cysteine pr 97.0 0.016 5.3E-07 49.7 13.3 119 29-200 16-144 (174)
53 3erv_A Putative C39-like pepti 91.3 0.49 1.7E-05 42.6 7.4 64 129-199 125-196 (236)
54 1ziv_A Calpain 9; cysteine pro 69.4 68 0.0023 29.9 12.9 107 47-201 162-274 (339)
55 3bb7_A Interpain A; cysteine p 56.3 18 0.00061 33.8 6.1 59 137-213 239-298 (321)
56 4d8b_A Streptopain; papain fol 49.7 21 0.00071 32.4 5.2 54 137-213 172-226 (261)
57 1dki_A Pyrogenic exotoxin B zy 48.7 28 0.00097 33.1 6.3 54 137-213 290-344 (371)
58 1omc_A Omega-conotoxin GVIA; p 47.3 9.6 0.00033 22.3 1.7 20 285-307 8-27 (28)
59 2r9f_A Calpain-1 catalytic sub 39.7 79 0.0027 29.4 7.8 62 135-201 209-275 (339)
60 1q2j_A MU-conotoxin SMIIIA; HE 33.4 20 0.00069 20.5 1.5 20 275-294 2-24 (26)
61 1p1p_A AA-conotoxin PIVA; neur 29.2 17 0.00058 20.5 0.7 10 275-284 1-11 (26)
62 1qk7_A Selenocosmia huwena lec 23.6 37 0.0013 20.5 1.6 21 286-308 8-28 (32)
63 2e4u_A Metabotropic glutamate 21.5 44 0.0015 32.8 2.6 53 244-310 480-542 (555)
64 1pqr_A Alpha-A-conotoxin EIVA; 20.8 28 0.00097 20.3 0.6 10 275-284 1-11 (31)
65 2h7z_B Irditoxin subunit B; th 20.7 51 0.0018 23.8 2.2 49 248-301 20-76 (77)
66 1mr6_A Neurotoxin; venom; NMR 20.7 1.3E+02 0.0044 20.8 4.3 47 249-300 11-67 (68)
67 2nqa_A Calpain 8; calpain, cal 20.5 1E+02 0.0035 28.4 4.8 39 176-214 241-309 (326)
68 2lr5_A Micasin; antimicrobial 25.3 22 0.00076 22.5 0.0 17 274-294 2-18 (38)
No 1
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=100.00 E-value=7.4e-65 Score=463.18 Aligned_cols=217 Identities=53% Similarity=0.955 Sum_probs=202.5
Q ss_pred CCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCCC-CCCCCCCcHHHHHHH
Q 019447 13 LSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSY-NSGCGGGLMDYAYQF 91 (341)
Q Consensus 13 lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~~-~~gC~GG~~~~a~~~ 91 (341)
||.++|||++|+||||||||.| |||||||++++||++++++++++++||||+|++|+... +.||+||++..|++|
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~c----GsCWAfa~~~~lE~~~~i~~~~~~~LS~q~l~dC~~~~~~~gC~GG~~~~a~~~ 76 (220)
T 3p5u_A 1 LPDYVDWRSSGAVVDIKDQGQC----GSAWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQNTRGCDGGFMTDGFQF 76 (220)
T ss_dssp CCSCEETTTTTCSCCCCBCCSS----BCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCCSSCCTTBCCCHHHHHHH
T ss_pred CCCCCcCCcCCCCCCCCcCCCC----hhHHHHHHHHHHHHHHHHHcCCCCCcCHhHcEECCCCCCCCCCCCCCHHHHHHH
Confidence 7999999999999999999999 99999999999999999999999999999999999754 789999999999999
Q ss_pred HHHhCCcccCCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHhCCcEEEEecccccccccCCceEeCCC
Q 019447 92 VIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPC 171 (341)
Q Consensus 92 l~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~GPV~v~i~~~~~~f~~y~~GIy~~~~ 171 (341)
+++++||++|++|||....+.|.......+.++|.+|..++.+++++||++|++|||+++|+++.++|++|++|||+..+
T Consensus 77 ~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~l~~~l~~GPV~v~~~~~~~~f~~Y~~Giy~~~~ 156 (220)
T 3p5u_A 77 IINNGGINTEANYPYTAEEGQCNLDLQQEKYVSIDTYENVPYNNEWALQTAVAYQPVSVALEAAGYNFQHYSSGIFTGPC 156 (220)
T ss_dssp HHHHTCBCBTTTSCCCSSCCCCCHHHHTCCSBCCCEEEECCTTCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCCC
T ss_pred HHHhCCcCcccccccccCCCCcCcCCCCCceEEEccEEEeCCCcHHHHHHHHhcCCEEEEEecCchhhccccCceECCCC
Confidence 99888999999999999999998765555668899999998888999999998899999999976789999999998888
Q ss_pred CCCCCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeecccccccC
Q 019447 172 STSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKT 234 (341)
Q Consensus 172 ~~~~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~ 234 (341)
++.++|||+|||||+++|++|||||||||++|||+|||||+|+.+ ..|.|||++.++||++.
T Consensus 157 ~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~-~~~~Cgi~~~~~~p~~~ 218 (220)
T 3p5u_A 157 GTAVDHAVTIVGYGTEGGIDYWIVKNSWGTTWGEEGYMRIQRNVG-GVGQCGIAKKASYPVKY 218 (220)
T ss_dssp CCSCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECCCC-TTCGGGTTSSCEEEECS
T ss_pred CCccceEEEEEEEecCCCceEEEEECCCCCCcccCCEEEEECCCC-CCCccCcccccceEEEe
Confidence 888899999999999999999999999999999999999999976 45799999999999874
No 2
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=100.00 E-value=1.2e-64 Score=462.18 Aligned_cols=220 Identities=50% Similarity=0.960 Sum_probs=201.1
Q ss_pred cCCCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCCCCCCCCCCcHHHHHH
Q 019447 11 ALLSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQ 90 (341)
Q Consensus 11 ~~lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~~~~gC~GG~~~~a~~ 90 (341)
++||.++|||++++|+||||||.| |||||||++++||++++++++++++||||+|+||+.. +.||+||++..||+
T Consensus 1 ~~lP~~~DwR~~~~v~~VkdQg~c----GsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~ 75 (221)
T 1cqd_A 1 DDLPDSIDWRENGAVVPVKNQGGC----GSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTA-NHGCRGGWMNPAFQ 75 (221)
T ss_dssp --CCSCEETTTTTCCCCCCBCTTS----BCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT-SCTTBCCCHHHHHH
T ss_pred CCCCCcCcCCCCCCcCCcccCCCC----ccHHHHHHHHHHHHHHHHhcCCeeeeccceeEECCCC-CCCCCCCCHHHHHH
Confidence 468999999999999999999999 9999999999999999999999999999999999963 78999999999999
Q ss_pred HHHHhCCcccCCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHhCCcEEEEecccccccccCCceEeCC
Q 019447 91 FVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGP 170 (341)
Q Consensus 91 ~l~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~GPV~v~i~~~~~~f~~y~~GIy~~~ 170 (341)
|+++++||++|++|||....+.|.... ..+.++|++|..++.+++++||++|++|||+++|++..++|+.|++|||+..
T Consensus 76 y~~~~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~ 154 (221)
T 1cqd_A 76 FIVNNGGINSEETYPYRGQDGICNSTV-NAPVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGS 154 (221)
T ss_dssp HHHHHTSBCBTTTSCCCSSCCCCCSSS-CCCSBCCSEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCC
T ss_pred HHHHhCCccccccCCccCCCCCcCCCC-CCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEeccCcccccccCccccCC
Confidence 998878999999999999888997653 3556889999999988899999999999999999997678999999999888
Q ss_pred CCCCCCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeecccccccCCC
Q 019447 171 CSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKTGQ 236 (341)
Q Consensus 171 ~~~~~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~~~ 236 (341)
|++.++|||+|||||+++|++|||||||||++|||+|||||+|+.+...|.|||+++++||+...+
T Consensus 155 ~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~~~~ 220 (221)
T 1cqd_A 155 CNISANHALTVVGYGTENDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPVKKGT 220 (221)
T ss_dssp CCCCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEECC--
T ss_pred CCCcCCeEEEEEEEcccCCCcEEEEEeCCCCCcccCCEEEEEcCCCCCCcccceeeeeeEEEecCC
Confidence 887889999999999999999999999999999999999999987655689999999999997543
No 3
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=100.00 E-value=1.6e-64 Score=463.85 Aligned_cols=223 Identities=49% Similarity=0.918 Sum_probs=205.0
Q ss_pred CCCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCCCCCCCCCCcHHHHHHH
Q 019447 12 LLSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQF 91 (341)
Q Consensus 12 ~lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~~~~gC~GG~~~~a~~~ 91 (341)
+||.++|||++|+|+||||||.| |||||||++++||++++++++++++||||+|++|+...+.||+||++..||+|
T Consensus 1 ~lP~~~DwR~~~~vtpVkdQg~c----GsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y 76 (229)
T 1s4v_A 1 TVPASVDWRKKGAVTSVKDQGQC----GSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEF 76 (229)
T ss_dssp CCCSCEETTTTTCCCCCCBCCSS----BCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCTTBCBCHHHHHHH
T ss_pred CCCCCEeCCCCCCCCCCccCccc----hHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhCCCCCCCCCCCCHHHHHHH
Confidence 48999999999999999999999 99999999999999999999999999999999999645789999999999999
Q ss_pred HHHhCCcccCCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHhCCcEEEEecccccccccCCceEeCCC
Q 019447 92 VIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPC 171 (341)
Q Consensus 92 l~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~GPV~v~i~~~~~~f~~y~~GIy~~~~ 171 (341)
|.+++||++|++|||....+.|.......+.++|.+|..++.+++++||++|++|||+++|++..++|++|++|||+..|
T Consensus 77 ~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~c 156 (229)
T 1s4v_A 77 IKQRGGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSC 156 (229)
T ss_dssp HHHHTCBCBTTTSCCCSSCCCCCHHHHTCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCC
T ss_pred HHHhCCccccccCCccCCCCCCCCCCCCCcEEEeeeEEEeCCccHHHHHHHHhcCCEEEEEEeCcHHHhhCCCcEECCCC
Confidence 98877999999999999889998654445678899999998888999999999999999999965789999999998878
Q ss_pred CCCCCceEEEEEeeecC-CeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeecccccccCCCCC
Q 019447 172 STSLDHAVLIVGYDSEN-GVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKTGQNP 238 (341)
Q Consensus 172 ~~~~~HaV~IVGyg~~~-g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~~~~p 238 (341)
++.++|||+|||||+++ |++|||||||||++|||+|||||+|+.+...|.|||+++++||+...+.+
T Consensus 157 ~~~~~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~~~~~~ 224 (229)
T 1s4v_A 157 GTELDHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIKKSSNN 224 (229)
T ss_dssp CCCCCEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEECCSSCC
T ss_pred CCCCCeEEEEEEeccccCCCCEEEEEeCCCCCccCCcEEEEEcCCCCCCCcCcccccceeeEecCCCC
Confidence 87789999999999986 99999999999999999999999999765568999999999999876554
No 4
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=100.00 E-value=9.1e-65 Score=473.99 Aligned_cols=225 Identities=50% Similarity=0.917 Sum_probs=204.0
Q ss_pred ccCCCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCCCCCCCCCCcHHHHH
Q 019447 10 LALLSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAY 89 (341)
Q Consensus 10 ~~~lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~~~~gC~GG~~~~a~ 89 (341)
+++||.++|||++|+|+||||||.| |||||||++++||++++|+++++++||||+|+||+...+.||+||++..||
T Consensus 1 v~~lP~~~DwR~~g~vtpVkdQg~C----GSCWAFaa~~alE~~~~i~~g~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~ 76 (262)
T 2fo5_A 1 VSDLPPSVDWRQKGAVTGVKDQGKC----GSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAF 76 (262)
T ss_dssp --CCCSCEETTTTTCCCCCCBCTTS----CCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCGGGCBCHHHHH
T ss_pred CCCCCCcccCCCCCCCCCCCCCCCC----chHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhcCCCCCCCCCCCHHHHH
Confidence 4679999999999999999999999 999999999999999999999999999999999996457899999999999
Q ss_pred HHHHHhCCcccCCcccCCCCCCcccccc--cCCc-eeeeceeEecCCChHHHHHHHHHhCCcEEEEecccccccccCCce
Q 019447 90 QFVIKNHGIDTEKDYPYRGQAGQCNKQK--LNRH-IVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGI 166 (341)
Q Consensus 90 ~~l~~~~Gi~~E~~yPY~~~~~~C~~~~--~~~~-~~~i~~y~~i~~~~~~~ik~al~~GPV~v~i~~~~~~f~~y~~GI 166 (341)
+|+++++||++|++|||....+.|.... ...+ .++|.+|..++.+++++||++|++|||+++|+++.++|++|++||
T Consensus 77 ~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~i~~y~~v~~~~e~~ik~al~~GPV~v~i~~~~~~f~~Y~sGV 156 (262)
T 2fo5_A 77 EYIKNNGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGV 156 (262)
T ss_dssp HHHHHTTCEEBTTTSCCCSSCCCCCHHHHHHHCCCEECCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSE
T ss_pred HHHHHcCCcCchhcCCCcCccCccCCcccccCCceeEEeceEEEcCCchHHHHHHHHHhCCEEEEEecChHHHhccCCce
Confidence 9998877999999999999989998653 2345 688999999988889999999999999999999767899999999
Q ss_pred EeCCCCCCCCceEEEEEeeec-CCeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeecccccccCCCCC
Q 019447 167 FTGPCSTSLDHAVLIVGYDSE-NGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKTGQNP 238 (341)
Q Consensus 167 y~~~~~~~~~HaV~IVGyg~~-~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~~~~p 238 (341)
|+..|++.++|||+|||||++ +|++|||||||||++|||+|||||+|+.+...|.|||++.++||+...+++
T Consensus 157 y~~~c~~~~~HaV~IVGyg~~~~G~~YWivkNSWG~~WGe~GY~ri~r~~n~~~~~CgI~~~~~~p~~~~~~~ 229 (262)
T 2fo5_A 157 FTGECGTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVKTYSKP 229 (262)
T ss_dssp ECCCCCCCCCEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEESSCSCTTCGGGTTTSCEEEECCC---
T ss_pred ECCCCCCcCCEEEEEEEEcccCCCceEEEEEeCCCCCCCCCeEEEEEcCCCCCCCccceeeeeeEEEecCCCC
Confidence 988888888999999999998 599999999999999999999999999876678999999999999877665
No 5
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=100.00 E-value=3e-64 Score=458.16 Aligned_cols=215 Identities=48% Similarity=0.888 Sum_probs=200.2
Q ss_pred CCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCCCCCCCCCCcHHHHHHHH
Q 019447 13 LSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFV 92 (341)
Q Consensus 13 lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~~~~gC~GG~~~~a~~~l 92 (341)
||.++|||++|+|+||||||.| |||||||++++||++++++++++++||||+|+||+. .+.||+||++..||+||
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~c----GsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~yi 75 (216)
T 1ppo_A 1 LPENVDWRKKGAVTPVRHQGSC----GSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER-RSHGCKGGYPPYALEYV 75 (216)
T ss_dssp CCSCEETTTTTCCCCCCBCCSS----BCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS-SSCTTBCCCHHHHHHHH
T ss_pred CCCcCcCCCCCCCCCCccCCcC----ccHHHHHHHHHHHHHHHHccCCceecCHHHHHhccC-CCCCCCCCCHHHHHHHH
Confidence 7999999999999999999999 999999999999999999999999999999999996 57899999999999999
Q ss_pred HHhCCcccCCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHhCCcEEEEecccccccccCCceEeCCCC
Q 019447 93 IKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCS 172 (341)
Q Consensus 93 ~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~GPV~v~i~~~~~~f~~y~~GIy~~~~~ 172 (341)
.++ ||++|++|||....+.|.........++|++|..++.+++++||++|++|||+++|+++.++|++|++|||+.+|+
T Consensus 76 ~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~ 154 (216)
T 1ppo_A 76 AKN-GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCG 154 (216)
T ss_dssp HHH-CBCBTTTSCCCSSCCCCCGGGCCSCCBCCCEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHHCCSSEECCSCC
T ss_pred HHh-CcCccccCCccCCCCCcCCCCCCCceEEeccEEEECCCCHHHHHHHHHhCCEEEEEecCChhhhhcCCceECCCCC
Confidence 887 8999999999998899987654456788999999988889999999999999999999767899999999988888
Q ss_pred CCCCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeeccccccc
Q 019447 173 TSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 233 (341)
Q Consensus 173 ~~~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 233 (341)
+.++|||+|||||+++|++|||||||||++|||+|||||+|+.+...|.|||+++++||+.
T Consensus 155 ~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~n~Cgi~~~~~~p~~ 215 (216)
T 1ppo_A 155 TKVDHAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTK 215 (216)
T ss_dssp SCCCEEEEEEEEEEETTEEEEEEECSBCSSSTBTTEEEEECCCSSSSCGGGTTSCCEEEEC
T ss_pred CCCCEEEEEEEeeccCCccEEEEEeCCCCCcccCcEEEEEcCCCCCCCcCccccceeeEee
Confidence 7789999999999999999999999999999999999999997655679999999999985
No 6
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=100.00 E-value=5.3e-64 Score=457.14 Aligned_cols=216 Identities=46% Similarity=0.853 Sum_probs=200.5
Q ss_pred CCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCCCCCCCCCCcHHHHHHHH
Q 019447 13 LSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFV 92 (341)
Q Consensus 13 lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~~~~gC~GG~~~~a~~~l 92 (341)
||.++|||++|+|+||||||.| |||||||++++||++++++++++++||||+|+||.. .+.||+||++..||+||
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~c----GsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~~ 75 (218)
T 1yal_A 1 YPQSIDWRAKGAVTPVKNQGAC----GSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDK-HSYGCKGGYQTTSLQYV 75 (218)
T ss_dssp CCSCEETTTTTCCCCCCBCCSS----BCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHH
T ss_pred CCCcCcCCCCCCCCCCccCccc----hhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhcC-CCCCCCCCCHHHHHHHH
Confidence 7999999999999999999999 999999999999999999999999999999999984 58899999999999999
Q ss_pred HHhCCcccCCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHhCCcEEEEecccccccccCCceEeCCCC
Q 019447 93 IKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCS 172 (341)
Q Consensus 93 ~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~GPV~v~i~~~~~~f~~y~~GIy~~~~~ 172 (341)
.++ ||++|++|||....+.|.........++|++|..++.+++++||++|++|||+++|+++.++|++|++|||+.+|+
T Consensus 76 ~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~~~ 154 (218)
T 1yal_A 76 ANN-GVHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALANQPLSVLVEAGGKPFQLYKSGVFDGPCG 154 (218)
T ss_dssp HHH-CBCBTTTSCCCSSCCCCCGGGCCSCCBCCSEEEECCSSBHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCC
T ss_pred HHc-CCCccccccccCCCCCcccCcCCCceEEEeeEEEeCCCCHHHHHHHHHhCCEEEEEeccchhccccCCceECCCCC
Confidence 887 8999999999998889987654456788999999988889999999999999999999767899999999988787
Q ss_pred CCCCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeecccccccC
Q 019447 173 TSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKT 234 (341)
Q Consensus 173 ~~~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~ 234 (341)
+.++|||+|||||+++|++|||||||||++|||+|||||+|+.++..|.|||+++++||+..
T Consensus 155 ~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 216 (218)
T 1yal_A 155 TKLDHAVTAVGYGTSDGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYYPFKG 216 (218)
T ss_dssp SCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECCCSBSCCGGGTTSSCEEEECC
T ss_pred CCCCEEEEEEEeeccCCccEEEEEeCCCCCcccCcEEEEECCCCCCCCccccccceeeEEEe
Confidence 77899999999999999999999999999999999999999975556799999999999864
No 7
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=100.00 E-value=6.9e-64 Score=455.53 Aligned_cols=214 Identities=50% Similarity=0.959 Sum_probs=198.8
Q ss_pred CCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCCCCCCCCCCcHHHHHHHH
Q 019447 13 LSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFV 92 (341)
Q Consensus 13 lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~~~~gC~GG~~~~a~~~l 92 (341)
||.++|||++|+|+||||||.| |||||||++++||++++++++++++||||+|+||+. .+.||+||++..||+|+
T Consensus 1 lP~~~DwR~~~~v~~VkdQg~c----GsCWAfa~~~~~e~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~~ 75 (215)
T 1iwd_A 1 LPSFVDWRSKGAVNSIKNQKQC----GSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDT-ASHGCNGGWMNNAFQYI 75 (215)
T ss_dssp CCSCEEGGGGTCSCCCCBCCSS----BCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCcccCCCC----chHHHHHHHHHHHHHHHHhcCCccccChhHeEECcC-CCCCCCCCCHHHHHHHH
Confidence 7999999999999999999999 999999999999999999999999999999999986 47899999999999999
Q ss_pred HHhCCcccCCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHhCCcEEEEecccccccccCCceEeCCCC
Q 019447 93 IKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCS 172 (341)
Q Consensus 93 ~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~GPV~v~i~~~~~~f~~y~~GIy~~~~~ 172 (341)
++++|+++|++|||...++.|.... .+.++|.+|..++.+++++||++|++|||+++|++..++|+.|++|||+..|+
T Consensus 76 ~~~~Gi~~e~~yPY~~~~~~C~~~~--~~~~~i~~~~~v~~~~~~~ik~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~ 153 (215)
T 1iwd_A 76 ITNGGIDTQQNYPYSAVQGSCKPYR--LRVVSINGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSGIFTGPCG 153 (215)
T ss_dssp HHHTCBCBTTTSCCCSSCCCCCTTC--CCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCC
T ss_pred HHhCCcccccccCccCCCCCCCCCC--CceEEeCcEEEeCCCcHHHHHHHHHhCCEEEEEecCCcchhhcCCceECCCCC
Confidence 8878999999999999888997654 35678999999988889999999999999999999855899999999988888
Q ss_pred CCCCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeeccccccc
Q 019447 173 TSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 233 (341)
Q Consensus 173 ~~~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 233 (341)
+.++|||+|||||+++|++|||||||||++|||+|||||+|+.+...|.|||+++++||+.
T Consensus 154 ~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 214 (215)
T 1iwd_A 154 TAQNHGVVIVGYGTQSGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYPTK 214 (215)
T ss_dssp CCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred CcCCEEEEEEEEeccCCccEEEEEeCCCCCcCCCcEEEEEcCCCCCCCCCCccccceeeee
Confidence 7889999999999999999999999999999999999999997555679999999999975
No 8
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=100.00 E-value=1.1e-63 Score=456.26 Aligned_cols=214 Identities=48% Similarity=0.921 Sum_probs=193.5
Q ss_pred CCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCCCCCCCCCCcHHHHHHHH
Q 019447 13 LSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFV 92 (341)
Q Consensus 13 lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~~~~gC~GG~~~~a~~~l 92 (341)
||.++|||++|+|+||||||.| |||||||++++||++++++++++++||||+|++|+.. +.||+||++..||+|+
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~c----GSCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~~~ 75 (222)
T 3u8e_A 1 APASIDWRKKGAVTSVKDQGAC----GMCWAFGATGAIEGIDAITTGRLISVSEQQIVDCDTX-XXXXXGGDADDAFRWV 75 (222)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSC----SSCTTTTHHHHHHHHHHHHHSCCCCBCHHHHHHHCC-------CCCHHHHHHHH
T ss_pred CCCcCcCCcCCCCCCcccCCCC----ccHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhccCc-ccccCCCCHHHHHHHH
Confidence 7999999999999999999999 9999999999999999999999999999999999974 8899999999999999
Q ss_pred HHhCCcccCCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHhCCcEEEEecccccccccCC-ceEeC-C
Q 019447 93 IKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSS-GIFTG-P 170 (341)
Q Consensus 93 ~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~GPV~v~i~~~~~~f~~y~~-GIy~~-~ 170 (341)
++++||++|++|||....+.|...... .++|.+|..++ +++++||++|++|||+++|+++.++|++|++ |||+. .
T Consensus 76 ~~~~Gi~~e~~yPY~~~~~~C~~~~~~--~~~i~~~~~v~-~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~~Giy~~~~ 152 (222)
T 3u8e_A 76 ITNGGIASDANYPYTGVDGTCDLNKPI--AARIDGYTNVP-NSSSALLDAVAKQPVSVNIYTSSTSFQLYTGPGIFAGSS 152 (222)
T ss_dssp HHHTCBCBTTTSCCCSSCCCCCCCSCC--CBCCCEEEECC-SCHHHHHHHHHHSCEEEEECCCSHHHHTCCCSSCBCCTT
T ss_pred HHcCCccchhcCCCcccCCccccCCCC--eEEEccEEEeC-CcHHHHHHHHhCCCEEEEEEecChhhhcEeCCceECCCc
Confidence 887899999999999999999875433 68899999998 6789999999899999999997669999999 99976 6
Q ss_pred CCC---CCCceEEEEEeeecC-CeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeecccccccC
Q 019447 171 CST---SLDHAVLIVGYDSEN-GVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKT 234 (341)
Q Consensus 171 ~~~---~~~HaV~IVGyg~~~-g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~ 234 (341)
|.+ .++|||+|||||+++ +++|||||||||++|||+|||||+|+.++..|.|||+++++||+..
T Consensus 153 ~~~~~~~~~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~g~Cgi~~~~~~p~~~ 220 (222)
T 3u8e_A 153 CSDDPATVDHTVLIVGYGSNGTNADYWIVKNSWGTEWGIDGYILIRRNTNRPDGVCAIDAWGSYPTKS 220 (222)
T ss_dssp CCCCGGGCCEEEEEEEEEESSTTCEEEEEECSBCTTSTBTTEEEEECSCSCTTCGGGTTSSCEEEECC
T ss_pred ccCCCCcCCEEEEEEEEeecCCCCcEEEEECCCCCCcccCCEEEEEcCCCCCCCcCCccccceEEEEe
Confidence 665 679999999999987 9999999999999999999999999987677899999999999865
No 9
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=100.00 E-value=3.4e-63 Score=476.12 Aligned_cols=219 Identities=47% Similarity=0.868 Sum_probs=202.7
Q ss_pred cccCCCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCCCCCCCCCCcHHHH
Q 019447 9 DLALLSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYA 88 (341)
Q Consensus 9 ~~~~lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~~~~gC~GG~~~~a 88 (341)
....||.++|||++|+||||||||.| |||||||++++||++++|+++++++||||+|+||+. .+.||+||++..|
T Consensus 103 ~~~~lP~~~DwR~~g~vt~VkdQg~C----GSCWAFaa~~alE~~~~i~~g~~~~lSeq~lvdC~~-~~~gC~GG~~~~a 177 (322)
T 1pci_A 103 DIVNLPENVDWRKKGAVTPVRHQGSC----GSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER-RSHGCKGGYPPYA 177 (322)
T ss_dssp CCCCSCSCEETTTTTCCCCCCBCTTS----CCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHSCT-TSCGGGCBCHHHH
T ss_pred cccCCCCeEecccCCCCCCccccccC----CccHHHHHHHHHHHHHHHHcCCccccCHHHHHhhcC-CCCCCCCCCHHHH
Confidence 34579999999999999999999999 999999999999999999999999999999999996 6889999999999
Q ss_pred HHHHHHhCCcccCCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHhCCcEEEEecccccccccCCceEe
Q 019447 89 YQFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFT 168 (341)
Q Consensus 89 ~~~l~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~GPV~v~i~~~~~~f~~y~~GIy~ 168 (341)
|+||.++ ||++|++|||.+..+.|.........++|.+|..++.+++++||++|++|||+|+|+++.++|++|++|||+
T Consensus 178 ~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~e~~l~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~ 256 (322)
T 1pci_A 178 LEYVAKN-GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFE 256 (322)
T ss_dssp HHHHHHH-CBCBTTTSCCCSSCCCCTTTTCCSCCBCCCCEEECCSSBHHHHHHHHHHSCEEEEECTTCHHHHTEEEEEEC
T ss_pred HHHHHHh-CCCchhhCCCCCCCCCCCCCCCCCceEEEeeEEEeCCCcHHHHHHHHHHCCEEEEEecccccccccCCeEeC
Confidence 9999887 899999999999999998764444567899999999888999999999999999999976789999999998
Q ss_pred CCCCCCCCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeeccccccc
Q 019447 169 GPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 233 (341)
Q Consensus 169 ~~~~~~~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 233 (341)
..|++.++|||+|||||+++|++|||||||||++|||+|||||+|+.+...|.|||++.++||++
T Consensus 257 ~~c~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~n~CgI~~~~~yp~~ 321 (322)
T 1pci_A 257 GPCGTKVDGAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTK 321 (322)
T ss_dssp CSCCSCCCEEEEEEEEEEETTEEEEEEECSBCSSSTBTTEEEEECCCSBSSCGGGGGGCCEEECC
T ss_pred CCCCCCCCEEEEEEEEeccCCccEEEEEeCCCCcccCCeEEEEEcCCCCCCCcCCcccceeEEEe
Confidence 88887889999999999999999999999999999999999999997545679999999999986
No 10
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=100.00 E-value=7.8e-63 Score=447.62 Aligned_cols=211 Identities=45% Similarity=0.801 Sum_probs=195.2
Q ss_pred CCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCCCCCCCCCCcHHHHHHHH
Q 019447 13 LSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFV 92 (341)
Q Consensus 13 lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~~~~gC~GG~~~~a~~~l 92 (341)
||.++|||++|+|+||||||.| |||||||++++||++++++++++++||||+|+||+. .+.||+||++..||+||
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~C----GsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~yi 75 (212)
T 2cio_A 1 IPEYVDWRQKGAVTPVKNQGSC----GSCWAFSAVVTIEGIIKIRTGNLNQYSEQELLDCDR-RSYGCNGGYPWSALQLV 75 (212)
T ss_dssp CCSCEETTTTTCCCCCCBCCSS----BCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHH
T ss_pred CCCcccCCCCCCCCCCccCCcc----chHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhCC-CCCCCCCCCHHHHHHHH
Confidence 7999999999999999999999 999999999999999999999999999999999996 57899999999999999
Q ss_pred HHhCCcccCCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHhCCcEEEEecccccccccCCceEeCCCC
Q 019447 93 IKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCS 172 (341)
Q Consensus 93 ~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~GPV~v~i~~~~~~f~~y~~GIy~~~~~ 172 (341)
.++ ||++|++|||...++.|.......+.++|.+|..++.+++++||++|++|||+++|+++.++|++|++|||+.+|+
T Consensus 76 ~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~~ 154 (212)
T 2cio_A 76 AQY-GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCG 154 (212)
T ss_dssp HHT-CBCBTTTSCCCSSCCCCCTTTTCSCSBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCC
T ss_pred HHh-CcCcccccCCcCCCCCcCCCCCCCceEEEeeEEEeCCccHHHHHHHHHhCCEEEEEeccCcchhhcCCceecCCCC
Confidence 876 8999999999998889987643455688999999988889999999999999999999756899999999988787
Q ss_pred CCCCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeeccccccc
Q 019447 173 TSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 233 (341)
Q Consensus 173 ~~~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 233 (341)
+.++|||+|||||+ +|||||||||++|||+|||||+|+.+...|.|||+++++||+.
T Consensus 155 ~~~~HaV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (212)
T 2cio_A 155 NKVDHAVAAVGYGP----NYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVK 211 (212)
T ss_dssp SCCCEEEEEEEEET----TEEEEECSBCTTSTBTTEEEEECSSSCTTCGGGTTSCCEEEEC
T ss_pred CCCCEEEEEEEecC----CeEEEEeCCCCCcccCcEEEEEcCCCCCCCccCcccceeEEEe
Confidence 77899999999998 7999999999999999999999997555679999999999975
No 11
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=100.00 E-value=6.5e-63 Score=448.34 Aligned_cols=211 Identities=48% Similarity=0.881 Sum_probs=197.4
Q ss_pred CCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCCCCCCCCCCcHHHHHHHH
Q 019447 13 LSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFV 92 (341)
Q Consensus 13 lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~~~~gC~GG~~~~a~~~l 92 (341)
||.++|||++|+||||||||.| |||||||++++||++++++++++++||||+|+||+. .+.||+||++..||+|+
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~c----GsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~~ 75 (213)
T 3ioq_A 1 IPTSIDWRQKGAVTPVRNQGGC----GSCWTFSSVAAVEGINKIVTGQLLSLSEQELLDCER-RSYGCRGGFPLYALQYV 75 (213)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTS----BCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHH
T ss_pred CCCCCCcccCCCCCCCCcCCCC----hhHHHHHHHHHHHHHHHHHcCCCcccCHHHhhhhcC-CCCCCCCCCHHHHHHHH
Confidence 7999999999999999999999 999999999999999999999999999999999997 68899999999999999
Q ss_pred HHhCCcccCCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHhCCcEEEEecccccccccCCceEeCCCC
Q 019447 93 IKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCS 172 (341)
Q Consensus 93 ~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~GPV~v~i~~~~~~f~~y~~GIy~~~~~ 172 (341)
.++ |+++|++|||.+..+.|.........+++.+|..++.+++++|+++|++|||+++|+++.++|+.|++|||...+.
T Consensus 76 ~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~~~~~~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~ 154 (213)
T 3ioq_A 76 ANS-GIHLRQYYPYEGVQRQCRASQAKGPKVKTDGVGRVPRNNEQALIQRIAIQPVSIVVEAKGRAFQNYRGGIFAGPCG 154 (213)
T ss_dssp HHH-CEEBGGGSCCCSSCCCCCGGGCCSCEECCCEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCC
T ss_pred HHc-CCCchhccCcCCCCCCCCCCccCCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEEechhhhhhccCCeEcCCCC
Confidence 888 9999999999999999987555567788999999998888899999999999999999767999999999988888
Q ss_pred CCCCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeeccccccc
Q 019447 173 TSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 233 (341)
Q Consensus 173 ~~~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 233 (341)
+.++|||+|||||+ +|||||||||++|||+|||||+|+.+...|.|||++.++||++
T Consensus 155 ~~~~HaV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 211 (213)
T 3ioq_A 155 TSIDHAVAAVGYGN----DYILIKNSWGTGWGEGGYIRIKRGSGNPQGACGVLSDSVFPTK 211 (213)
T ss_dssp SCCCEEEEEEEEET----TEEEEECSBCTTSTBTTEEEEESSCSSTTCGGGTTSCCEEEEC
T ss_pred CccCceEEEEecCC----CeEEEECCCCCCcccCCeEEEEcCCCCCCCcccccCcceEeEe
Confidence 88899999999997 7999999999999999999999998656689999999999986
No 12
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=100.00 E-value=1.9e-62 Score=454.61 Aligned_cols=221 Identities=45% Similarity=0.838 Sum_probs=197.9
Q ss_pred CCCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCCCCCCCCCCcHHHHHHH
Q 019447 12 LLSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQF 91 (341)
Q Consensus 12 ~lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~~~~gC~GG~~~~a~~~ 91 (341)
+||.++|||++|+|+||||||.| |||||||++++||++++++++++++||||+|+||+. .+.||+||++..||+|
T Consensus 1 ~lP~~~DwR~~g~vtpVkdQg~C----GsCWAfa~~~~lE~~~~i~~g~~~~LS~q~lvdC~~-~~~gC~GG~~~~a~~y 75 (246)
T 2b1m_A 1 DAPESWDWSKKGVITKVKFQGQC----GSGWAFSATGAIEAAHAIATGNLVSLSEQELIDCVD-ESEGCYNGWHYQSFEW 75 (246)
T ss_dssp -CCSCEEGGGTTCCCCCCBCCSS----CCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSBTTTBCCHHHHHHH
T ss_pred CCCCcCCCCCCCCCCCcccCCCC----chHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhcC-CCCCCCCCCHHHHHHH
Confidence 48999999999999999999999 999999999999999999999999999999999986 5789999999999999
Q ss_pred HHHhCCcccCCcccCCCCCCcccccccCCceeeecee---EecCCChHHHHHHHHHh----CCcEEEEecccccccccCC
Q 019447 92 VIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGY---KDVPENNEKQLLQAVVA----QPVSVGICGSERAFQLYSS 164 (341)
Q Consensus 92 l~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~~y---~~i~~~~~~~ik~al~~----GPV~v~i~~~~~~f~~y~~ 164 (341)
+.+++||++|++|||...++.|.... ....++|++| ..++.+++++||++|++ |||+++|++ ++|++|++
T Consensus 76 ~~~~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~y~~~~~v~~~~~~~ik~~l~~~~~~GPV~v~i~~--~~f~~Y~~ 152 (246)
T 2b1m_A 76 VVKHGGIASEADYPYKARDGKCKANE-IQDKVTIDNYGVQILSNESTESEAESSLQSFVLEQPISVSIDA--KDFHFYSG 152 (246)
T ss_dssp HHHTTCBCBTTTSCCCSSCCCCCGGG-CCCCBCCSEEEEEECCTTSCHHHHHHHHHHHHHHSCEEEEECC--TTGGGCCS
T ss_pred HHHhCCcCccccccccCCCCcCcCCC-CCCceeEcCcceeeecCCChHHHHHHHHHhhccCCCEEEEEEc--chhhcccc
Confidence 98877999999999999989998653 3456789999 88887789999999998 999999998 68999999
Q ss_pred ceEeC-CCCCC--CCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeecccccccCCCCCCC
Q 019447 165 GIFTG-PCSTS--LDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKTGQNPPP 240 (341)
Q Consensus 165 GIy~~-~~~~~--~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~~~~pp~ 240 (341)
|||+. .|++. ++|||+|||||+++|++|||||||||++|||+|||||+|+.++..|.|||++.++||+...+.|+.
T Consensus 153 Giy~~~~c~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~n~CgI~~~~~~p~~~~~~~~~ 231 (246)
T 2b1m_A 153 GIYDGGNCSSPYGINHFVLIVGYGSEDGVDYWIAKNSWGEDWGIDGYIRIQRNTGNLLGVCGMNYFASYPIIEKSETLK 231 (246)
T ss_dssp SEECCTTCCSSCCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECCSSCTTCGGGTTSEEEEEECCC-----
T ss_pred eeecCCCCCCCCcCceEEEEEEEeccCCceEEEEEeCCCCcccCCcEEEEEcCCCCCCccccccceeeEEEecCCCCCC
Confidence 99976 57664 799999999999999999999999999999999999999975556799999999999987655443
No 13
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=100.00 E-value=1.6e-62 Score=446.32 Aligned_cols=212 Identities=45% Similarity=0.874 Sum_probs=197.0
Q ss_pred CCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCCCCCCCCCCcHHHHHHHH
Q 019447 13 LSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFV 92 (341)
Q Consensus 13 lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~~~~gC~GG~~~~a~~~l 92 (341)
||.++|||++|+|+||||||.| |||||||++++||++++++++++++||||+|+||+. .+.||+||++..||+|+
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~c----GsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~y~ 75 (214)
T 2bdz_A 1 YPESIDWREKGAVTPVKNQNPC----GSCWAFSTVATIEGINKIITGQLISLSEQELLDCER-RSHGCDGGYQTTSLQYV 75 (214)
T ss_dssp CCSCEETTTTTCCCCCCBCTTS----BCHHHHHHHHHHHHHHHHHHSCBCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCCccCCCC----ccHHHHHhHHHHHHHHHHhcCCccccCHHHHHhhcC-CCCCCCCCCHHHHHHHH
Confidence 6999999999999999999999 999999999999999999999999999999999996 57899999999999999
Q ss_pred HHhCCcccCCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHhCCcEEEEecccccccccCCceEeCCCC
Q 019447 93 IKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCS 172 (341)
Q Consensus 93 ~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~GPV~v~i~~~~~~f~~y~~GIy~~~~~ 172 (341)
+++ ||++|++|||....+.|.........++|++|..++.+++++||++|++|||+++|+++.++|++|++|||+.+|+
T Consensus 76 ~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~i~~~~~~f~~Y~~Giy~~~~~ 154 (214)
T 2bdz_A 76 VDN-GVHTEREYPYEKKQGRCRAKDKKGPKVYITGYKYVPANDEISLIQAIANQPVSVVTDSRGRGFQFYKGGIYEGPCG 154 (214)
T ss_dssp HHH-CEEBTTTSCCCSSCCCCCTTTCCSCEECCCEEEEECSSBHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCSCC
T ss_pred HHh-CCCccccCCCCCCCCCCCCCCCCCceeeecCEEEeCCCcHHHHHHHHHhCCEEEEEeeChhHhhcccCceecCCCC
Confidence 888 9999999999998889987654456788999999988889999999999999999999767899999999988888
Q ss_pred CCCCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeecccccccC
Q 019447 173 TSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKT 234 (341)
Q Consensus 173 ~~~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~ 234 (341)
+.++|||+|||||+ +|||||||||++|||+|||||+|+.+...|.|||++.++||+..
T Consensus 155 ~~~~HaV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 212 (214)
T 2bdz_A 155 TNTDHAVTAVGYGK----TYLLLKNSWGPNWGEKGYIRIKRASGRSKGTCGVYTSSFFPIKG 212 (214)
T ss_dssp SCCCEEEEEEEECS----SEEEEECSBCTTSTBTTEEEEECCCSBSSCGGGTTSCEEEEECC
T ss_pred CCCCeEEEEEEcCC----CeEEEEeCCCCCcccCCEEEEEcCCCCCCCcccccccceEEEec
Confidence 78899999999998 89999999999999999999999975556799999999999864
No 14
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=100.00 E-value=2.5e-62 Score=443.07 Aligned_cols=207 Identities=52% Similarity=0.973 Sum_probs=192.1
Q ss_pred CCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCCCCCCCCCCcHHHHHHHH
Q 019447 13 LSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFV 92 (341)
Q Consensus 13 lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~~~~gC~GG~~~~a~~~l 92 (341)
||.++|||++|+|+||||||.| |||||||++++||+++++++++.++||||+|+||+. .+.||+||++..||+|+
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~c----GsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~y~ 75 (208)
T 1o0e_A 1 LPEQIDWRKKGAVTPVKNQGSC----GSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDK-KNHGCLGGAFVFAYQYI 75 (208)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSS----BCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHH
T ss_pred CCCcCcCCCCCCCCCCccCCCC----ccHHHHHHHHHHHHHHHHhcCCceecCHHHhhhhcC-CCCCCCCCCHHHHHHHH
Confidence 7999999999999999999999 999999999999999999999999999999999986 57899999999999999
Q ss_pred HHhCCcccCCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHhCCcEEEEecccccccccCCceEeCCCC
Q 019447 93 IKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCS 172 (341)
Q Consensus 93 ~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~GPV~v~i~~~~~~f~~y~~GIy~~~~~ 172 (341)
.+++|+++|++|||...+..|.. ..+.++|.+|..++.+++++||++|++|||+++|+++.++|++|++|||+.+|+
T Consensus 76 ~~~~Gi~~e~~yPY~~~~~~C~~---~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~ 152 (208)
T 1o0e_A 76 INNGGIDTQANYPYKAVQGPCQA---ASKVVSIDGYNGVPFCNEXALKQAVAVQPSTVAIDASSAQFQQYSSGIFSGPCG 152 (208)
T ss_dssp HHHTCBCBTTTSCCCSSCCCCCC---CCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCC
T ss_pred HHhCCcCcccccCccCCCCcCCC---CCceEEeCeEEEeCCCCHHHHHHHHHhCCEEEEEEccCcccccccCceECCCCC
Confidence 88779999999999998889976 345678999999988889999999999999999999756899999999988888
Q ss_pred CCCCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeeccccccc
Q 019447 173 TSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 233 (341)
Q Consensus 173 ~~~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 233 (341)
+.++|||+|||||+ +|||||||||++|||+|||||+|+.+ .|.|||+++++||+.
T Consensus 153 ~~~~HaV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~~~~~--~~~Cgi~~~~~~p~~ 207 (208)
T 1o0e_A 153 TKLNHGVTIVGYQA----NYWIVRNSWGRYWGEKGYIRMLRVGG--CGLCGIARLPYYPTK 207 (208)
T ss_dssp SCCCEEEEEEEECS----SEEEEECSBCTTSTBTTEEEEECCST--TCGGGTTSSCEEEEC
T ss_pred CcCCEEEEEEEeCC----CeEEEEcCCCCcccCCcEEEEEcCCC--CCcCCCcccceeeec
Confidence 78899999999998 89999999999999999999999863 359999999999975
No 15
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=100.00 E-value=3.7e-62 Score=443.60 Aligned_cols=212 Identities=46% Similarity=0.849 Sum_probs=194.6
Q ss_pred CCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCCCCCCCCCCcHHHHHHHH
Q 019447 13 LSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFV 92 (341)
Q Consensus 13 lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~~~~gC~GG~~~~a~~~l 92 (341)
||.++|||++|+|+||||||.| |||||||++++||++++++++++++||||+|++|.. .+.||+||++..|++|+
T Consensus 1 lP~~~Dwr~~~~v~pvkdQg~c----GsCWAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~-~~~gC~GG~~~~a~~~~ 75 (215)
T 3kwz_A 1 APDSVDYRKKGYVTPVKNQGQC----GSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS-ENDGCGGGYMTNAFQYV 75 (215)
T ss_dssp CTTCEETTTTTCCCCCCBCTTS----BCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHH
T ss_pred CCCCCccCcCCCCCCcccCCCC----cHHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcC-CCCCCCCCCHHHHHHHH
Confidence 7999999999999999999999 999999999999999999999999999999999997 68899999999999999
Q ss_pred HHhCCcccCCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHh-CCcEEEEecccccccccCCceEeC-C
Q 019447 93 IKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTG-P 170 (341)
Q Consensus 93 ~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~-GPV~v~i~~~~~~f~~y~~GIy~~-~ 170 (341)
++++|+++|++|||...++.|.... ....+++.+|..++..++++||++|++ |||+++|++..++|++|++|||.. .
T Consensus 76 ~~~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~ 154 (215)
T 3kwz_A 76 QKNRGIDSEDAYPYVGQEESCMYNP-TGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDES 154 (215)
T ss_dssp HHHTCEEBTTTSCCCSSCCCCCCCG-GGEEECCCCEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTT
T ss_pred HHhCCccccccCCCccCCCccccCC-CCceeEecceEEeCCCCHHHHHHHHHHCCCEEEEEeechhhhhcccCCeECCCC
Confidence 8888999999999999989997653 345678999999988789999999986 899999999767999999999964 4
Q ss_pred C-CCCCCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeeccccccc
Q 019447 171 C-STSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 233 (341)
Q Consensus 171 ~-~~~~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 233 (341)
+ ...++|||+|||||++++++|||||||||++|||+|||||+|+.+ +.|||++.++||+.
T Consensus 155 ~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WG~~Gy~~i~r~~~---n~Cgi~~~~~~p~~ 215 (215)
T 3kwz_A 155 CNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKN---NACGIANLASFPKM 215 (215)
T ss_dssp CCTTCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEESSSS---SGGGTTSSCEEECC
T ss_pred CCCChhhCEEEEEEEeccCCceEEEEECCcCcccccCCEEEEecCCC---CccCcCCceeeeeC
Confidence 5 346799999999999999999999999999999999999999853 59999999999974
No 16
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=100.00 E-value=5.8e-62 Score=443.22 Aligned_cols=214 Identities=41% Similarity=0.813 Sum_probs=195.2
Q ss_pred CCCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhC-CC-CCCCCCCCcHHHHH
Q 019447 12 LLSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCD-RS-YNSGCGGGLMDYAY 89 (341)
Q Consensus 12 ~lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~-~~-~~~gC~GG~~~~a~ 89 (341)
.||.++|||++|+||||||||.| |||||||++++||++++++++++++||||+|++|+ .. .+.||+||++..|+
T Consensus 1 ~lP~~~DwR~~~~vtpVkdQg~c----GsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~~gC~GG~~~~a~ 76 (218)
T 3ovx_A 1 ILPDSVDWREKGCVTEVKYQGSC----GACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAF 76 (218)
T ss_dssp -CCSCEEGGGGTCCCCCCBCTTS----CCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCCCHHHHH
T ss_pred CCCCCCCcccCCCCCCCccCCCC----ccHHHHHHHHHHHHHHHHHcCCccccCHHHheeccCCcCCCCCCCCCCHHHHH
Confidence 48999999999999999999999 99999999999999999999999999999999998 32 37899999999999
Q ss_pred HHHHHhCCcccCCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHh-CCcEEEEecccccccccCCceEe
Q 019447 90 QFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLYSSGIFT 168 (341)
Q Consensus 90 ~~l~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~-GPV~v~i~~~~~~f~~y~~GIy~ 168 (341)
+|+++++|+++|++|||....+.|.... ....+++.+|..++..++++||++|++ |||+++|++..++|++|++|||.
T Consensus 77 ~~~~~~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~ 155 (218)
T 3ovx_A 77 QYIIDNKGIDSDASYPYKAMDQKCQYDS-KYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYY 155 (218)
T ss_dssp HHHHHHTCEEBTTTSCCCSSCCCCCCCG-GGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHHCCSSEEC
T ss_pred HHHHHhCCcCcccccCccCCCCcccCCC-ccceeeeccEEEeCCCCHHHHHHHHHhcCCEEEEEEecchhhhcccCceec
Confidence 9998878999999999999989997653 455678899999988789999999987 89999999986789999999996
Q ss_pred C-CCCCCCCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeeccccccc
Q 019447 169 G-PCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 233 (341)
Q Consensus 169 ~-~~~~~~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 233 (341)
. .+...++|||+|||||+++|++|||||||||++|||+|||||+|+. .|.|||+++++||+.
T Consensus 156 ~~~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~---~n~cgi~~~~~~p~~ 218 (218)
T 3ovx_A 156 EPSCTQNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNK---GNHCGIASFPSYPEI 218 (218)
T ss_dssp CTTCCSCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS---SSGGGTTTSCEEEEC
T ss_pred CCCCCcccCcEEEEEEEeccCCceEEEEECCCCCccccCCEEEEecCC---CCcccccCceeeeeC
Confidence 5 4666789999999999999999999999999999999999999985 259999999999974
No 17
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=100.00 E-value=6.3e-62 Score=472.60 Aligned_cols=214 Identities=43% Similarity=0.765 Sum_probs=199.4
Q ss_pred cCCCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCCCCCCCCCCcHHHHHH
Q 019447 11 ALLSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQ 90 (341)
Q Consensus 11 ~~lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~~~~gC~GG~~~~a~~ 90 (341)
..||.++|||++|+||||||||.| |||||||++++||+++++++++++.||||+|+||+. .+.||+||++..||+
T Consensus 150 ~~lP~s~DWR~~g~VtpVkdQG~C----GSCWAFsa~~alE~~~~i~tg~~~~LSeQ~LvdC~~-~~~GC~GG~~~~a~~ 224 (363)
T 3tnx_A 150 VNIPEYVDWRQKGAVTPVKNQGSC----GSAWAFSAVSTIESIIKIRTGNLNEYSEQELLDCDR-RSYGCNGGYPWSALQ 224 (363)
T ss_dssp CCCCSCEEGGGGTCCCCCCBCCSS----BCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHH
T ss_pred CCCCcceecccCCCCCCCccCCcC----CchhhhhhcccHHHHHHHHcCCCCCcCHHHHhcccC-CCCCCCCCChHHHHh
Confidence 579999999999999999999999 999999999999999999999999999999999997 578999999999999
Q ss_pred HHHHhCCcccCCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHhCCcEEEEecccccccccCCceEeCC
Q 019447 91 FVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGP 170 (341)
Q Consensus 91 ~l~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~GPV~v~i~~~~~~f~~y~~GIy~~~ 170 (341)
|+.++ ||++|++|||.+.++.|..........++.+|..++..++.+++++|++|||+|+|++..++|++|++|||..+
T Consensus 225 yi~~~-Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~e~~l~~~v~~gPvsvai~a~~~~F~~Y~sGVy~~~ 303 (363)
T 3tnx_A 225 LVAQY-GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGP 303 (363)
T ss_dssp HHHHT-CBCBTTTSCCCSSCCCCCGGGGCSCSBCCCEEEEECSSCHHHHHHHHTTSCEEEEECCCSHHHHTEEEEEECCC
T ss_pred HHHhc-CccccccCCCcCcCCCcccCCCCCceeeccceEEcchhhHHHHHHHHHcCCcEEEEEecchhhhCCCCCEECCC
Confidence 99765 99999999999988888766556666788899999888899999999999999999988789999999999988
Q ss_pred CCCCCCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeecccccccC
Q 019447 171 CSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKT 234 (341)
Q Consensus 171 ~~~~~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~ 234 (341)
|++.++|||+|||||+ +|||||||||++|||+|||||+|+.++..|+|||++.|+||++.
T Consensus 304 ~~~~lnHaV~iVGyG~----~YWIVKNSWGt~WGe~GY~rI~Rg~~~~~~~CGI~~~a~yPikn 363 (363)
T 3tnx_A 304 CGNKVDHAVAAVGYGP----NYILIRNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVKN 363 (363)
T ss_dssp CCSCCCEEEEEEEEET----TEEEEECSBCTTSTBTTEEEEECCSCCSSCGGGTTSCEEEEECC
T ss_pred CCCCCCeEEEEEEcCC----CcEEEEeCCCCccccCcEEEEEcCCCCCCCcCCccceeeecccC
Confidence 8888999999999987 49999999999999999999999998778999999999999973
No 18
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=100.00 E-value=4.3e-62 Score=445.66 Aligned_cols=217 Identities=42% Similarity=0.825 Sum_probs=198.9
Q ss_pred cCCCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCCC-CCCCCCCcHHHHH
Q 019447 11 ALLSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSY-NSGCGGGLMDYAY 89 (341)
Q Consensus 11 ~~lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~~-~~gC~GG~~~~a~ 89 (341)
.+||.++|||++|+|+||||||.| |||||||++++||+++++++++.++||||+|++|.... +.||+||++..|+
T Consensus 5 ~~lP~~~Dwr~~~~v~pVkdQg~c----GsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gC~GG~~~~a~ 80 (224)
T 3f75_A 5 SELPAGVDWRSRGCVTPVKDQRDC----GSCWAFSTTGALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAF 80 (224)
T ss_dssp GGSCSCEEHHHHTCCCCCCBCCSS----SCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHHH
T ss_pred cCCCCceecccCCCCCCCccCCCC----ccHHHHHHHHHHHHHHHHhcCCCceeCHHHHhhcccCCCCCCCCCCCHHHHH
Confidence 579999999999999999999999 99999999999999999999999999999999998643 7899999999999
Q ss_pred HHHHHhCCcccCCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHhCCcEEEEecccccccccCCceEeC
Q 019447 90 QFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTG 169 (341)
Q Consensus 90 ~~l~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~GPV~v~i~~~~~~f~~y~~GIy~~ 169 (341)
+|+++++||++|++|||....+.|.... ....++|.+|..++..++++||++|++|||+++|++..++|++|++|||++
T Consensus 81 ~~~~~~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~~~~~~~~~l~~~l~~gPV~v~i~~~~~~f~~y~~Giy~~ 159 (224)
T 3f75_A 81 QYVLDSGGICSEDAYPYLARDEECRAQS-CEKVVKILGFKDVPRRSEAAMKAALAKSPVSIAIEADQMPFQFYHEGVFDA 159 (224)
T ss_dssp HHHHHHTCBCBTTTSCCCSSCCCCCGGG-SCCCBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTEEEEEECC
T ss_pred HHHHHhCCccccccCCCcCCCCCCCcCC-CCceEEeccEEEeCCChHHHHHHHHcCCCEEEEEeccchhhhcCccceECC
Confidence 9998867999999999999988997654 334567899999988889999999999999999999766899999999997
Q ss_pred CCCCCCCceEEEEEeeec--CCeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeeccccccc
Q 019447 170 PCSTSLDHAVLIVGYDSE--NGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 233 (341)
Q Consensus 170 ~~~~~~~HaV~IVGyg~~--~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 233 (341)
.+...++|||+|||||++ ++++|||||||||++|||+|||||+|+.+ ..|.|||+++++||+.
T Consensus 160 ~~~~~~~Hav~iVGyg~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~-~~~~cgi~~~~~~p~~ 224 (224)
T 3f75_A 160 SCGTDLDHGVLLVGYGTDKESKKDFWIMKNSWGTGWGRDGYMYMAMHKG-EEGQCGLLLDASFPVM 224 (224)
T ss_dssp CCCCCCCEEEEEEEEEEETTTTEEEEEEECSBCTTSTBTTEEEEESCSC-TTCGGGTTSSCEEEEC
T ss_pred CCCCccCeEEEEEEEecccCCCCCEEEEECCcCcchhhCCEEEEEcCCC-CCCcCcccCceeeeeC
Confidence 787788999999999998 89999999999999999999999999873 3469999999999974
No 19
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=100.00 E-value=1.1e-61 Score=448.20 Aligned_cols=217 Identities=34% Similarity=0.684 Sum_probs=198.0
Q ss_pred ccccCCCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCCCCCCCCCCcHHH
Q 019447 8 EDLALLSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDY 87 (341)
Q Consensus 8 ~~~~~lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~~~~gC~GG~~~~ 87 (341)
.+..+||.++|||++|+|+||||||.| |||||||++++||++++++++++++||||+|++|+. .+.||+||++..
T Consensus 13 ~~~~~lP~~~DwR~~~~vtpVkdQg~C----GsCWAFaa~~alE~~~~i~~~~~~~lSeq~l~dC~~-~~~gC~GG~~~~ 87 (241)
T 2oul_A 13 GEENFDHAAYDWRLHSGVTPVKDQKNC----GSCWAFSSIGSVESQYAIRKNKLITLSEQELVDCSF-KNYGCNGGLINN 87 (241)
T ss_dssp TTCCCCSSCEEGGGTTCCCCCCBCCSS----BCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHCT-TSCTTBCBCHHH
T ss_pred cccccCCCccccCcCCCCCCCccCccc----hHHHHHHHHHHHHHHHHHhcCCCcccCHHHHHhhcC-CCCCCCCCCHHH
Confidence 345679999999999999999999999 999999999999999999999999999999999986 478999999999
Q ss_pred HHHHHHHhCCcccCCcccCCCCCCc-ccccccCCceeeeceeEecCCChHHHHHHHHHhCCcEEEEecccccccccCCce
Q 019447 88 AYQFVIKNHGIDTEKDYPYRGQAGQ-CNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGI 166 (341)
Q Consensus 88 a~~~l~~~~Gi~~E~~yPY~~~~~~-C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~GPV~v~i~~~~~~f~~y~~GI 166 (341)
||+||.+++|+++|++|||...... |.... ....++|.+|..++..++++||++| |||+++|+++ ++|+.|++||
T Consensus 88 a~~yi~~~~Gi~~e~~yPY~~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~-~~f~~Y~~Gi 163 (241)
T 2oul_A 88 AFEDMIELGGICPDGDYPYVSDAPNLCNIDR-CTEKYGIKNYLSVPDNKLKEALRFL--GPISISVAVS-DDFAFYKEGI 163 (241)
T ss_dssp HHHHHHHTTSBCBTTSSCCCTTSCCCCCTTS-SSCCBCCSEEEECCTTCHHHHHHHT--CCEEEEECBC-HHHHTCCSSB
T ss_pred HHHHHHHhCCcCccccCCCcCCCCCcCCCCC-CccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecC-cchhhcCCcE
Confidence 9999988679999999999998888 97643 3456889999999887899999999 9999999996 7899999999
Q ss_pred EeCCCCCCCCceEEEEEeeecC----------CeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeeccccccc
Q 019447 167 FTGPCSTSLDHAVLIVGYDSEN----------GVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 233 (341)
Q Consensus 167 y~~~~~~~~~HaV~IVGyg~~~----------g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 233 (341)
|+..|+..++|||+|||||+++ |++|||||||||++|||+|||||+|+.++..|.|||++.++||+.
T Consensus 164 y~~~c~~~~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 240 (241)
T 2oul_A 164 FDGECGDQLNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIETDESGLMRKCGLGTDAFIPLI 240 (241)
T ss_dssp CCSCBCSSCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCGGGTTSSEEEEEC
T ss_pred EcCcCCCCCCEEEEEEEeccccccccccccCCCCCEEEEEeCCCCCcccCCEEEEEcCCCCCCCcCCccceEEEEee
Confidence 9877766689999999999985 889999999999999999999999998765677999999999975
No 20
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=100.00 E-value=2.2e-61 Score=440.26 Aligned_cols=212 Identities=43% Similarity=0.878 Sum_probs=191.9
Q ss_pred CCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCCC-CCCCCCCcHHHHHHH
Q 019447 13 LSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSY-NSGCGGGLMDYAYQF 91 (341)
Q Consensus 13 lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~~-~~gC~GG~~~~a~~~ 91 (341)
||.++|||++|+|+||||||.| |||||||++++||++++++++++++||||+|+||+... +.||+||++..||+|
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~c----GsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~g~~gC~GG~~~~a~~y 76 (220)
T 2xu3_A 1 APRSVDWREKGYVTPVKNQGQC----GSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQY 76 (220)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSS----BCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTTTCCTTBCCCHHHHHHH
T ss_pred CCCcEeCCCCCCCCCCcccCcc----cHHHHHHhHHHHHHHHHHhcCCceecCHHHHHhhccCCCCCCCCCCCHHHHHHH
Confidence 7999999999999999999999 99999999999999999999999999999999999643 789999999999999
Q ss_pred HHHhCCcccCCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHh-CCcEEEEecccccccccCCceEeCC
Q 019447 92 VIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTGP 170 (341)
Q Consensus 92 l~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~-GPV~v~i~~~~~~f~~y~~GIy~~~ 170 (341)
+++++||++|++|||....+.|...+ ....++|.+|..++. ++++||++|++ |||+++|+++.++|++|++|||..+
T Consensus 77 ~~~~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~~~~~~~~f~~Y~~Gvy~~~ 154 (220)
T 2xu3_A 77 VQDNGGLDSEESYPYEATEESCKYNP-KYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEP 154 (220)
T ss_dssp HHHHTCEEBTTTSCCCSSCCCCCCCG-GGEEECCSEEEECCS-CHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCT
T ss_pred HHHhCCcccccccCCcccCcCccCCC-CCcceeeeeEEEeCC-CHHHHHHHHHhcCCEEEEEeecCcccccccceEEcCC
Confidence 97667999999999999888997653 345678999999987 78899999986 9999999997668999999999754
Q ss_pred -CCC-CCCceEEEEEee----ecCCeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeeccccccc
Q 019447 171 -CST-SLDHAVLIVGYD----SENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 233 (341)
Q Consensus 171 -~~~-~~~HaV~IVGyg----~~~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 233 (341)
|+. .++|||+||||| +++|++|||||||||++|||+|||||+|+.+ +.|||+++++||+.
T Consensus 155 ~c~~~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WG~~Gy~~i~~~~~---n~Cgi~~~~~~p~~ 220 (220)
T 2xu3_A 155 DCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRR---NHCGIASAASYPTV 220 (220)
T ss_dssp TCCSSCCCEEEEEEEEEECCCSSSCCEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEEEC
T ss_pred CCCCCCCCeEEEEEEcCCccccCCCCcEEEEEeCCCCCcccCcEEEEecCCC---CcCCccccceeeeC
Confidence 654 679999999999 5678999999999999999999999999852 48999999999973
No 21
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=100.00 E-value=9.9e-62 Score=449.04 Aligned_cols=219 Identities=32% Similarity=0.648 Sum_probs=199.4
Q ss_pred CCccccCCCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCCCCCCCCCCcH
Q 019447 6 VLEDLALLSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLM 85 (341)
Q Consensus 6 ~~~~~~~lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~~~~gC~GG~~ 85 (341)
...+..+||.++|||++++|+||||||.| |||||||++++||++++++++.+++||||+|++|+. .+.||+||++
T Consensus 13 ~~~~~~~lP~~~DwR~~~~vtpVkdQg~c----GsCWAfa~~~alE~~~~i~~~~~~~lSeq~lvdC~~-~~~gC~GG~~ 87 (243)
T 3bwk_A 13 KPADAKLDRIAYDWRLHGGVTPVKDQALC----GSCWAFSSVGSVESQYAIRKKALFLFSEQELVDCSV-KNNGCYGGYI 87 (243)
T ss_dssp SCTTCCCCCSCEEGGGTTCCCCCCBCCSS----CCHHHHHHHHHHHHHHHHHHCSCCCBCHHHHHHHCT-TSCGGGCCCH
T ss_pred cccccccCCCceecCcCCCCCCCccCCCC----chHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcC-CCCCCCCCCH
Confidence 34566789999999999999999999999 999999999999999999999999999999999986 3789999999
Q ss_pred HHHHHHHHHhCCcccCCcccCCCCCCc-ccccccCCceeeeceeEecCCChHHHHHHHHHhCCcEEEEecccccccccCC
Q 019447 86 DYAYQFVIKNHGIDTEKDYPYRGQAGQ-CNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSS 164 (341)
Q Consensus 86 ~~a~~~l~~~~Gi~~E~~yPY~~~~~~-C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~GPV~v~i~~~~~~f~~y~~ 164 (341)
..||+||.+++|+++|++|||....+. |.... ....++|.+|..++.+++++||++| |||+++|+++ ++|+.|++
T Consensus 88 ~~a~~y~~~~~Gi~~e~~yPY~~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~-~~f~~Y~~ 163 (243)
T 3bwk_A 88 TNAFDDMIDLGGLCSQDDYPYVSNLPETCNLKR-CNERYTIKSYVSIPDDKFKEALRYL--GPISISIAAS-DDFAFYRG 163 (243)
T ss_dssp HHHHHHHHHTTSBCBTTTSCCCTTSCCCCCGGG-CSSCBCCCEEEECCTTCHHHHHHHT--CCEEEEECCC-HHHHTCCS
T ss_pred HHHHHHHHHhCCcccccccCCcCCCCCcCCCCC-CccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecC-hhHHhcCC
Confidence 999999988679999999999998888 97643 3456789999999887899999999 9999999996 78999999
Q ss_pred ceEeCCCCCCCCceEEEEEeeecC----------CeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeeccccccc
Q 019447 165 GIFTGPCSTSLDHAVLIVGYDSEN----------GVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 233 (341)
Q Consensus 165 GIy~~~~~~~~~HaV~IVGyg~~~----------g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 233 (341)
|||+..|+..++|||+|||||+++ |++|||||||||++|||+|||||+|+.++..|.|||+++++||+.
T Consensus 164 Giy~~~c~~~~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 242 (243)
T 3bwk_A 164 GFYDGECGAAPNHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDENGYKKTCSIGTEAYVPLL 242 (243)
T ss_dssp SSCCCCCCSSCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCSTTTTSSEEEEEC
T ss_pred ceecCCCCCcCCeEEEEEEecCccccccccccCCCCCEEEEEeCCCCCcCCCcEEEEEcCCCCCCCcCCccceEEEEec
Confidence 999877766689999999999985 889999999999999999999999998765677999999999975
No 22
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=100.00 E-value=4.9e-61 Score=459.72 Aligned_cols=213 Identities=46% Similarity=0.835 Sum_probs=195.6
Q ss_pred CCCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCCCCCCCCCCcHHHHHHH
Q 019447 12 LLSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQF 91 (341)
Q Consensus 12 ~lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~~~~gC~GG~~~~a~~~ 91 (341)
.||.++|||++|+||||||||.| |||||||++++||++++|+++++++||||+|+||+. .+.||+||++..||+|
T Consensus 99 ~lP~~~DwR~~g~vtpVkdQg~C----GSCWAFs~~~alE~~~~i~~g~~~~LSeq~lvdC~~-~~~gC~GG~~~~a~~y 173 (314)
T 1by8_A 99 RAPDSVDYRKKGYVTPVKNQGQC----GSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS-ENDGCGGGYMTNAFQY 173 (314)
T ss_dssp CCCSCCBSTTTTCSCCCCBCCSS----SCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHTTCT-TSCGGGCCCSHHHHHH
T ss_pred CCCCeEeCCCCCCCCCcccCCCC----CCcHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcC-CCCCCcCCCHHHHHHH
Confidence 39999999999999999999999 999999999999999999999999999999999996 6889999999999999
Q ss_pred HHHhCCcccCCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHh-CCcEEEEecccccccccCCceEeCC
Q 019447 92 VIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTGP 170 (341)
Q Consensus 92 l~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~-GPV~v~i~~~~~~f~~y~~GIy~~~ 170 (341)
|++++||++|++|||.+..+.|.... ....++|.+|..++..++++||++|++ |||+|+|+++.++|++|++|||..+
T Consensus 174 i~~~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~~~~~f~~Y~~Gvy~~~ 252 (314)
T 1by8_A 174 VQKNRGIDSEDAYPYVGQEESCMYNP-TGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDE 252 (314)
T ss_dssp HHHTTCBCBTTTSCCCSSCCCCCCCG-GGCCBCCSCEEECCSSCHHHHHHHHHHHCCEEEEECCCSHHHHTEEEECBCCT
T ss_pred HHHcCCcCcHhhCCCCCCCCCcCCCC-ccceeEECcEEEecCCCHHHHHHHHHHcCCEEEEEEeChHHhhhccCceecCC
Confidence 98778999999999999989997653 334578899999998789999999986 9999999997678999999999765
Q ss_pred -CCC-CCCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeeccccccc
Q 019447 171 -CST-SLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 233 (341)
Q Consensus 171 -~~~-~~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 233 (341)
|+. .++|||+|||||+++|++|||||||||++|||+|||||+|+. .|.|||++.++||++
T Consensus 253 ~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~---~n~CgI~~~~~~p~~ 314 (314)
T 1by8_A 253 SCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNK---NNACGIANLASFPKM 314 (314)
T ss_dssp TCCSSCCCEEEEEEEEEEETTEEEEEEECSBTTTSTBTTEEEECCSS---SCGGGTTSSCEEECC
T ss_pred CCCCCCCCeEEEEEEEeccCCceEEEEEcCCCCCcCcCCEEEEEcCC---CCcCCccCeeEEeeC
Confidence 665 679999999999999999999999999999999999999984 359999999999973
No 23
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=100.00 E-value=6.5e-61 Score=435.82 Aligned_cols=208 Identities=34% Similarity=0.675 Sum_probs=186.1
Q ss_pred CCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCCCCCCCCCCcHHHHHHHH
Q 019447 13 LSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFV 92 (341)
Q Consensus 13 lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~~~~gC~GG~~~~a~~~l 92 (341)
||.++|||++|+||||||||.| |||||||++++||++++++++++++||||+|+||+. .+.||+||++..||+|+
T Consensus 1 lP~~~Dwr~~g~vtpVkdQg~c----GsCWAfa~~~ale~~~~i~~~~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~y~ 75 (215)
T 3i06_A 1 APAAVDWRARGAVTAVKDQGQC----GSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDK-TDSGCSGGLMNNAFEWI 75 (215)
T ss_dssp CCSEEEGGGGTCCCCCCBCCSS----CCHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHCS-SSCGGGCCCHHHHHHHH
T ss_pred CCCcccCCcCCCCCCCCCCCCC----ccHHHHHHHHHHHHHHHHhCCCCCccCHHHHhccCC-CCCCCCCCCHHHHHHHH
Confidence 7999999999999999999999 999999999999999999999999999999999986 57899999999999999
Q ss_pred HHh--CCcccCCcccCCCCCC---cccccccCCceeeeceeEecCCChHHHHHHHHHh-CCcEEEEecccccccccCCce
Q 019447 93 IKN--HGIDTEKDYPYRGQAG---QCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLYSSGI 166 (341)
Q Consensus 93 ~~~--~Gi~~E~~yPY~~~~~---~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~-GPV~v~i~~~~~~f~~y~~GI 166 (341)
+++ +|+++|++|||....+ .|.... ....++|.+|..++. ++++||++|++ |||+++|++ ++|++|++||
T Consensus 76 ~~~~~gGi~~e~~yPY~~~~~~~~~C~~~~-~~~~~~i~~~~~v~~-~~~~ik~~l~~~gPV~v~~~~--~~f~~Y~~Gi 151 (215)
T 3i06_A 76 VQENNGAVYTEDSYPYASGEGISPPCTTSG-HTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDA--SSWMTYTGGV 151 (215)
T ss_dssp HHHSTTEEEC-CCSCCCCTTSCCCCCCCSS-CCEEEEEEEEEECCS-CHHHHHHHHHHHCCEEEEECC--TTGGGCCSSE
T ss_pred HHhccccccccCccCCcCCCCCCCccccCC-cccceEecceEEeCC-hHHHHHHHHHHCCCEEEEEEc--hHHhcCCCCc
Confidence 875 5799999999997543 686543 334578899999976 58899998875 999999998 4899999999
Q ss_pred EeCCCCCCCCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeeccccccc
Q 019447 167 FTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 233 (341)
Q Consensus 167 y~~~~~~~~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 233 (341)
|+....+.++|||+|||||++++++|||||||||++|||+|||||+|+.+ .|||+++++||+.
T Consensus 152 y~~~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~rg~n----~cgi~~~~~~~~~ 214 (215)
T 3i06_A 152 MTSCVSEQLDHGVLLVGYNDSAAVPYWIIKNSWTTQWGEEGYIRIAKGSN----QCLVKEEASSAVV 214 (215)
T ss_dssp ECSCCCSCCCEEEEEEEEESSSSSCEEEEECSBCTTSTBTTEEEEESSSC----GGGTTSSEEEEEE
T ss_pred ccCCCCCccCcEEEEEEEeccCCcEEEEEECCCCCCcccCceEEEecCCC----eecCCCceeEEec
Confidence 98655567799999999999999999999999999999999999999854 9999999999875
No 24
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=100.00 E-value=4e-61 Score=438.27 Aligned_cols=212 Identities=40% Similarity=0.827 Sum_probs=193.0
Q ss_pred CCCCCCCccCC-CCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCC-CCCCCCCCcHHHHHH
Q 019447 13 LSFTGHKLQMI-LLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRS-YNSGCGGGLMDYAYQ 90 (341)
Q Consensus 13 lP~~~D~R~~g-~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~-~~~gC~GG~~~~a~~ 90 (341)
||.++|||++| +||||||||.| |||||||++++||++++++++++++||||+|++|+.. .+.||+||++..|++
T Consensus 1 lP~~~DwR~~~~~vtpVkdQg~c----GsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~ 76 (220)
T 8pch_A 1 YPPSMDWRKKGNFVSPVKNQGSC----GSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFE 76 (220)
T ss_dssp CCSCEEHHHHSSCSCCCCBCTTS----CCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHGGGGTCCGGGCCCHHHHHH
T ss_pred CCCCEecCcCCCcCCcccccCCC----chHHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhCcCccCCCCCCCCCHHHHHH
Confidence 79999999999 99999999999 9999999999999999999999999999999999863 378999999999999
Q ss_pred HHHHhCCcccCCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHh-CCcEEEEecccccccccCCceEeC
Q 019447 91 FVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTG 169 (341)
Q Consensus 91 ~l~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~-GPV~v~i~~~~~~f~~y~~GIy~~ 169 (341)
|+++++|+++|++|||....+.|.... ....+++.+|..++..++++||++|++ |||+++|+++ ++|+.|++|||..
T Consensus 77 ~~~~~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~~~~~~~-~~f~~Y~~Giy~~ 154 (220)
T 8pch_A 77 YIRYNKGIMGEDTYPYKGQDDHCKFQP-DKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVT-NDFLMYRKGIYSS 154 (220)
T ss_dssp HHHHHTCEEBTTTSCCCSSCCCCCCCG-GGEEECEEEEEECCTTCHHHHHHHHHHTCCEEEEECCC-HHHHTCCSSEECC
T ss_pred HHHHcCCcCcccccCccCCCCCCCCCC-CcceEEeCCEEEeCCCCHHHHHHHHHhcCCEEEEEEec-cchhhcCCCcccC
Confidence 998878999999999999989997653 345678899999988889999999985 8999999997 5899999999965
Q ss_pred C-CCC---CCCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeecccccccC
Q 019447 170 P-CST---SLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKT 234 (341)
Q Consensus 170 ~-~~~---~~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~ 234 (341)
+ |.. .++|||+|||||+++|++|||||||||++|||+|||||+|+.+ .|||++.++||+..
T Consensus 155 ~~~~~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~n----~cgi~~~~~~~~p~ 219 (220)
T 8pch_A 155 TSCHKTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKN----MCGLAACASYPIPL 219 (220)
T ss_dssp SSCCCSTTTCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSC----GGGTTTSCEEEEEC
T ss_pred CcCCCCCCcCCcEEEEEEEEccCCeeEEEEECCCCcCcccCCEEEEEcCCC----ccccCCCceeEeec
Confidence 3 432 5799999999999999999999999999999999999999854 99999999999864
No 25
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=100.00 E-value=3.7e-61 Score=460.80 Aligned_cols=215 Identities=41% Similarity=0.802 Sum_probs=196.5
Q ss_pred cCCCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhC-CC-CCCCCCCCcHHHH
Q 019447 11 ALLSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCD-RS-YNSGCGGGLMDYA 88 (341)
Q Consensus 11 ~~lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~-~~-~~~gC~GG~~~~a 88 (341)
.+||.++|||++|+||||||||.| |||||||++++||++++|+++++++||||+|+||+ .. .+.||+||++..|
T Consensus 97 ~~lP~~~DwR~~g~vtpVkdQg~C----GSCWAfs~~~alE~~~~i~~g~~~~LSeq~lvdC~~~~~~~~gC~GG~~~~a 172 (315)
T 2c0y_A 97 RILPDSVDWREKGCVTEVKYQGSC----GAAWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTA 172 (315)
T ss_dssp -CCCSCEETTTTTCCCCCCBCTTS----CCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCBCHHHH
T ss_pred CCCCCeEecCCCCCcCCCcCcccC----CCcHHHHHHHHHHHHHHHHhCCCcCcCHHHHHhhcccccCCCCCCCCCHHHH
Confidence 369999999999999999999999 99999999999999999999999999999999998 42 3789999999999
Q ss_pred HHHHHHhCCcccCCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHh-CCcEEEEecccccccccCCceE
Q 019447 89 YQFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLYSSGIF 167 (341)
Q Consensus 89 ~~~l~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~-GPV~v~i~~~~~~f~~y~~GIy 167 (341)
|+|+.+++||++|++|||.+..+.|.... ....++|.+|..++.+++++||++|++ |||+|+|+++.++|++|++|||
T Consensus 173 ~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~~~~~f~~Y~~Gvy 251 (315)
T 2c0y_A 173 FQYIIDNKGIDSDASYPYKAMDQKCQYDS-KYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVY 251 (315)
T ss_dssp HHHHHHHTCEEBTTTSCCCSSCCCCCCCG-GGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHTEEEEEE
T ss_pred HHHHHHhCCcCchhcCCCccCCCCcccCC-cccccccCCeEEeCCCCHHHHHHHHHHcCCEEEEEecCchhhhccCCCcc
Confidence 99998778999999999999989997653 345678999999988789999999987 8999999997678999999999
Q ss_pred eCC-CCCCCCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeeccccccc
Q 019447 168 TGP-CSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 233 (341)
Q Consensus 168 ~~~-~~~~~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 233 (341)
..+ |++.++|||+|||||+++|++|||||||||++|||+|||||+|+. .|.|||++.++||++
T Consensus 252 ~~~~c~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~---~n~CgI~~~~~~p~~ 315 (315)
T 2c0y_A 252 YEPSCTQNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNK---GNHCGIASFPSYPEI 315 (315)
T ss_dssp CCTTCCSCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS---SSGGGTTTSCEEEEC
T ss_pred cCCCCCCcCCEEEEEEEEeecCCCcEEEEEcCCCCCcCCCcEEEEEcCC---CCccCcCceeEEeeC
Confidence 765 777789999999999999999999999999999999999999984 359999999999973
No 26
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=100.00 E-value=9.9e-61 Score=434.30 Aligned_cols=208 Identities=38% Similarity=0.716 Sum_probs=187.4
Q ss_pred CCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCCCCCCCCCCcHHHHHHHH
Q 019447 13 LSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFV 92 (341)
Q Consensus 13 lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~~~~gC~GG~~~~a~~~l 92 (341)
||.++|||++|+|+||||||.| |||||||++++||++++++++.+++||||+|+||+. .+.||+||++..||+||
T Consensus 1 lP~~~DwR~~~~vt~VkdQg~c----GsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~i 75 (214)
T 1m6d_A 1 APPEWDWRSKGAVTKVKDQGMC----GSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDK-MDKACMGGLPSNAYSAI 75 (214)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSS----BCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS-SSCTTBCCCHHHHHHHH
T ss_pred CCCcCcCCCCCCCCCCccCCCC----chHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcC-CCCCCCCCCHHHHHHHH
Confidence 7999999999999999999999 999999999999999999999999999999999986 47899999999999999
Q ss_pred HHhCCcccCCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHh-CCcEEEEecccccccccCCceEeCC-
Q 019447 93 IKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTGP- 170 (341)
Q Consensus 93 ~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~-GPV~v~i~~~~~~f~~y~~GIy~~~- 170 (341)
.+++||++|++|||.+....|..... ...+++.+|..++. ++++||++|++ |||+++|++. .|++|++|||...
T Consensus 76 ~~~~Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~~~~i~~-~~~~ik~~l~~~GPV~v~i~~~--~f~~Y~~Giy~~~~ 151 (214)
T 1m6d_A 76 KNLGGLETEDDYSYQGHMQSCQFSAE-KAKVYIQDSVELSQ-NEQKLAAWLAKRGPISVAINAF--GMQFYRHGISRPLR 151 (214)
T ss_dssp HHHTCBCBTTTSCCCSSCCCCCCCGG-GCCBCCSEEEECCS-CHHHHHHHHHHHCCEEEEECTH--HHHHCCSSEECCCG
T ss_pred HHhcCcccccCcCcCCCCCcCCCCcc-cceEEecCEEEeCh-HHHHHHHHHHhCCCEEEEEEec--hhhhcCCceecCCC
Confidence 88779999999999998889976542 33467888888876 57889988875 9999999985 5999999999752
Q ss_pred --CCC-CCCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeeccccccc
Q 019447 171 --CST-SLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 233 (341)
Q Consensus 171 --~~~-~~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 233 (341)
|+. .++|||+|||||+++|++|||||||||++|||+|||||+|+. |.|||++.++||+.
T Consensus 152 ~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~----n~Cgi~~~~~~~~~ 213 (214)
T 1m6d_A 152 PLCSPWLIDHAVLLVGYGQRSDVPFWAIKNSWGTDWGEKGYYYLHRGS----GACGVNTMASSAVV 213 (214)
T ss_dssp GGSCTTCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEESSS----CGGGTTTTCEEEEC
T ss_pred CcCCCCcCCEEEEEEEEeecCCcEEEEEEeCCCCCcccCcEEEEEcCC----CccccCceeEEEEe
Confidence 443 579999999999999999999999999999999999999985 49999999999975
No 27
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=100.00 E-value=7.1e-61 Score=461.45 Aligned_cols=213 Identities=40% Similarity=0.774 Sum_probs=196.3
Q ss_pred cCCCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCC--CcccCHHHHHhhCCCCCCCCCCCcHHHH
Q 019447 11 ALLSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGS--LVSLSEQELIDCDRSYNSGCGGGLMDYA 88 (341)
Q Consensus 11 ~~lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~--~~~LSeq~l~dc~~~~~~gC~GG~~~~a 88 (341)
.+||.++|||++|+||||||||.| |||||||++++||++++++++. +++||||+|+||+.. +.||+||++..|
T Consensus 114 ~~lP~s~DwR~~g~vtpVkdQg~C----GSCWAFaa~~alE~~~~i~~g~~~~~~LSeQ~LvdC~~~-~~GC~GG~~~~a 188 (331)
T 3qj3_A 114 VRYPASFDWRDQGMVSPVKNQGSC----GSSWAFSSTGAIESQMKIANGAGYDSSVSEQQLVDCVPN-ALGCSGGWMNDA 188 (331)
T ss_dssp CCCCSSEEGGGGTCSCCCCBCCSS----CCHHHHHHHHHHHHHHHHHHCTTSCCCBCHHHHHHHCTT-SCGGGCCCHHHH
T ss_pred cCCCcceecccCCccCCCccCccc----chhhHHHHHHHHHHHHHHHhCCCcccCcCHHHHhhhccC-CCCCCCCCHHHH
Confidence 479999999999999999999999 9999999999999999999999 899999999999974 889999999999
Q ss_pred HHHHHHhCCcccCCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHh-CCcEEEEecccccccccCCceE
Q 019447 89 YQFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLYSSGIF 167 (341)
Q Consensus 89 ~~~l~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~-GPV~v~i~~~~~~f~~y~~GIy 167 (341)
|+|+++++||++|++|||.+.++.|.... ....++|.+|..++..++++||++|++ |||+|+|+++.+ |++|++|||
T Consensus 189 ~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~v~i~a~~~-f~~Y~~Gvy 266 (331)
T 3qj3_A 189 FTYVAQNGGIDSEGAYPYEMADGNCHYDP-NQVAARLSGYVYLSGPDENMLADMVATKGPVAVAFDADDP-FGSYSGGVY 266 (331)
T ss_dssp HHHHHHHTCEEBTTTSCCCSSCCCCCCCT-TSEEECCSEEEEESSCCHHHHHHHHHHHCCEEEEECCCTT-GGGEEEEEE
T ss_pred HHHHHHcCCcCcccccCccCCCCCCCCCc-ccceeEeeEEEEeCCCCHHHHHHHHHhCCCEEEEEEcccc-cccccCceE
Confidence 99999888999999999999999998653 456678999999998889999999996 999999999854 999999999
Q ss_pred eC-CCC-CCCCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeeccccccc
Q 019447 168 TG-PCS-TSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 233 (341)
Q Consensus 168 ~~-~~~-~~~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 233 (341)
.. .|. ..++|||+|||||+++|++|||||||||++|||+|||||+|+.+ |.|||++.++||++
T Consensus 267 ~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~~~~~~p~v 331 (331)
T 3qj3_A 267 YNPTCETNKFTHAVLIVGYGNENGQDYWLVKNSWGDGWGLDGYFKIARNAN---NHCGIAGVASVPTL 331 (331)
T ss_dssp CCTTCCSSCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEEEC
T ss_pred eCCCCCCCcCCEEEEEEEEeccCCceEEEEEcCCCCCcCCCCEEEEEcCCC---CccCcCCceeeeeC
Confidence 65 454 56799999999999999999999999999999999999999863 59999999999974
No 28
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=100.00 E-value=6.3e-61 Score=437.69 Aligned_cols=213 Identities=28% Similarity=0.465 Sum_probs=193.1
Q ss_pred ccccCCCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCCCCCCCCCCcHHH
Q 019447 8 EDLALLSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDY 87 (341)
Q Consensus 8 ~~~~~lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~~~~gC~GG~~~~ 87 (341)
.-..+||.++|||++|+||||||||.| |||||||++++||+++++++++.++||||+|++|+. +.||+||++..
T Consensus 5 ~~~~~lP~~~DwR~~~~vtpVkdQg~c----GsCWAfa~~~~lE~~~~~~~~~~~~lS~q~l~dc~~--~~gC~GG~~~~ 78 (222)
T 3f5v_A 5 SINGNAPAEIDLRQMRTVTPIRMQGGC----GSAWAFSGVAATESAYLAYRQQSLDLAEQELVDCAS--QHGCHGDTIPR 78 (222)
T ss_dssp CCCCCCCSCEEHHHHTCSCCCCBCCSS----BCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC--SSTTBCCCHHH
T ss_pred ccccCCCCCCCCccCCCCCCCCCCCCC----hhHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhCcC--CCCCCCCCHHH
Confidence 344689999999999999999999999 999999999999999999999999999999999997 88999999999
Q ss_pred HHHHHHHhCCcccCCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHh--CCcEEEEecc-cccccccCC
Q 019447 88 AYQFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA--QPVSVGICGS-ERAFQLYSS 164 (341)
Q Consensus 88 a~~~l~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~--GPV~v~i~~~-~~~f~~y~~ 164 (341)
|++|++++ |+++|++|||.+..+.|. ......+++.+|..++..++++||++|++ |||+++|.+. .++|++|++
T Consensus 79 a~~~~~~~-Gi~~e~~yPY~~~~~~C~--~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~~gpV~v~~~~~~~~~f~~Y~~ 155 (222)
T 3f5v_A 79 GIEYIQHN-GVVQESYYRYVAREQSCR--RPNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDG 155 (222)
T ss_dssp HHHHHHHH-CEEBGGGSCCCSSCCCCC--CCSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCCS
T ss_pred HHHHHHHc-CCCchhhCCCcccCCCcc--CCcCcceeeccEEEeCCCCHHHHHHHHHhcCCCEEEEEEeccchhhhccCC
Confidence 99999886 999999999999888998 33556788999999987889999999997 7999999984 368999999
Q ss_pred ceEe-CCC-CCCCCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeeccccccc
Q 019447 165 GIFT-GPC-STSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 233 (341)
Q Consensus 165 GIy~-~~~-~~~~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 233 (341)
|||. ..+ ...++|||+|||||+++|++|||||||||++|||+|||||+|+. |.|||+++++||+.
T Consensus 156 gi~~~~~~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~r~~----n~cgi~~~~~~p~~ 222 (222)
T 3f5v_A 156 RTIIQRDNGYQPNYHAVNIVGYSNAQGVDYWIVRNSWDTNWGDNGYGYFAANI----DLMMIEEYPYVVIL 222 (222)
T ss_dssp SSCBCCCCSSSCEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTSCEEEEC
T ss_pred CceecCCCCCCccCcEEEEEEEeccCCCEEEEEEcCCCCCcccCCEEEEEcCC----CeecCCCceeEEeC
Confidence 9874 333 45679999999999999999999999999999999999999985 49999999999963
No 29
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=100.00 E-value=2.2e-60 Score=457.40 Aligned_cols=212 Identities=43% Similarity=0.837 Sum_probs=194.8
Q ss_pred cCCCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCC-CCCCCCCCcHHHHH
Q 019447 11 ALLSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRS-YNSGCGGGLMDYAY 89 (341)
Q Consensus 11 ~~lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~-~~~gC~GG~~~~a~ 89 (341)
.+||.++|||++ +||||||||.| |||||||++++||++++++++++++||||+|+||+.. .+.||+||++..||
T Consensus 114 ~~lP~~~DwR~~-~vtpVkdQg~C----GSCWAFaa~~alE~~~~i~~g~~~~LSeQ~LvdC~~~~g~~GC~GG~~~~a~ 188 (329)
T 3qt4_A 114 KPLAASVDWRSN-AVSEVKDQGQC----GSSWSFSTTGAVEGQLALQRGRLTSLSEQNLIDCSSSYGNAGCDGGWMDSAF 188 (329)
T ss_dssp SCCCSCEECTTT-SCCCCCBCCSS----BCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCTTBCCCHHHHH
T ss_pred cCCCCCEEcccc-ccCCCccCCCC----cChHHHHHHHHHHHHHHHHcCCcccCCHHHHHHhccccCCCCCCCCChhHHH
Confidence 479999999999 99999999999 9999999999999999999999999999999999974 37899999999999
Q ss_pred HHHHHhCCcccCCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHh-CCcEEEEecccccccccCCceEe
Q 019447 90 QFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLYSSGIFT 168 (341)
Q Consensus 90 ~~l~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~-GPV~v~i~~~~~~f~~y~~GIy~ 168 (341)
+||+++ ||++|++|||.+.++.|.... ....++|.+|..++.+++++||++|++ |||+|+|+++. +|++|++|||.
T Consensus 189 ~yi~~~-Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~v~i~a~~-~f~~Y~~GVy~ 265 (329)
T 3qt4_A 189 SYIHDY-GIMSESAYPYEAQGDYCRFDS-SQSVTTLSGYYDLPSGDENSLADAVGQAGPVAVAIDATD-ELQFYSGGLFY 265 (329)
T ss_dssp HHHHHS-CBCBTTTSCCCSSCCCCCCCG-GGCCBCCSEEEECCTTCHHHHHHHHHHTCCEEEEECCCG-GGTTEEEEEEC
T ss_pred HHHHHc-CCCcHHHeeeecCCCCCCCCc-ccceEEeceEEEecCCCHHHHHHHHHhCCCEEEEEecCh-hhhhccCceee
Confidence 999888 999999999999999998654 345678999999998889999999997 99999999984 99999999997
Q ss_pred C-CCC-CCCCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeeccccccc
Q 019447 169 G-PCS-TSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 233 (341)
Q Consensus 169 ~-~~~-~~~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 233 (341)
. .|. ..++|||+|||||+++|++|||||||||++|||+|||||+|+.+ |.|||++.++||++
T Consensus 266 ~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~~~~~yp~v 329 (329)
T 3qt4_A 266 DQTCNQSDLNHGVLVVGYGSDNGQDYWILKNSWGSGWGESGYWRQVRNYG---NNCGIATAASYPAL 329 (329)
T ss_dssp CSSCCSSCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEESSSS---SGGGTTTTCEEEEC
T ss_pred cCCCCCCcCCEEEEEEEEEeeCCccEEEEEeCCCCcccCCcEEEEEeCCC---CccCCCCceeEeeC
Confidence 5 464 56899999999999999999999999999999999999999863 59999999999974
No 30
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=100.00 E-value=2.4e-60 Score=455.36 Aligned_cols=214 Identities=43% Similarity=0.864 Sum_probs=194.5
Q ss_pred cCCCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCC-CCCCCCCCcHHHHH
Q 019447 11 ALLSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRS-YNSGCGGGLMDYAY 89 (341)
Q Consensus 11 ~~lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~-~~~gC~GG~~~~a~ 89 (341)
.+||.++|||++|+||||||||.| |||||||++++||++++|+++++++||||+|+||+.. .+.||+||++..||
T Consensus 95 ~~lP~~~DwR~~g~vtpVkdQg~C----GSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~~~g~~gC~GG~~~~a~ 170 (316)
T 1cs8_A 95 YEAPRSVDWREKGYVTPVKNQGQC----GSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAF 170 (316)
T ss_dssp CCCCSCEEGGGGTCCCCCCBCCSS----SCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHHH
T ss_pred cCCCCcEecCCCCCcCCCCcccCC----ccHHHHHHHHHHHHHHHHHcCCCcCcCHHHHHHhccccCCCCCCCCCHHHHH
Confidence 469999999999999999999999 9999999999999999999999999999999999863 27899999999999
Q ss_pred HHHHHhCCcccCCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHh-CCcEEEEecccccccccCCceEe
Q 019447 90 QFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLYSSGIFT 168 (341)
Q Consensus 90 ~~l~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~-GPV~v~i~~~~~~f~~y~~GIy~ 168 (341)
+|+++++||++|++|||.+..+.|.... ....++|.+|..++. ++++||++|++ |||+|+|+++.++|++|++|||.
T Consensus 171 ~yi~~~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~i~~~~~~f~~Y~~Gvy~ 248 (316)
T 1cs8_A 171 QYVQDNGGLDSEESYPYEATEESCKYNP-KYSVANDAGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYF 248 (316)
T ss_dssp HHHHHHTCEEBTTTSCCCSSCCCCCCCG-GGEEECCCCEEECCS-CHHHHHHHHHHHCCEEEEECCCSHHHHTEEEEEEC
T ss_pred HHHHHhCCcCchhccCCCCCCCCcCCCC-ccceeEeccEEEeCC-CHHHHHHHHHhcCCEEEEEecCChhhccccCceEC
Confidence 9998677999999999999989997653 345688999999987 78999999986 99999999976689999999997
Q ss_pred CC-CCC-CCCceEEEEEee---ec-CCeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeeccccccc
Q 019447 169 GP-CST-SLDHAVLIVGYD---SE-NGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 233 (341)
Q Consensus 169 ~~-~~~-~~~HaV~IVGyg---~~-~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 233 (341)
.+ |+. .++|||+||||| ++ +|++|||||||||++|||+|||||+|+. .|.|||++.++||++
T Consensus 249 ~~~c~~~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WGe~GY~~i~r~~---~n~CgI~~~~~~p~~ 316 (316)
T 1cs8_A 249 EPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDR---RNHCGIASAASYPTV 316 (316)
T ss_dssp CTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSS---SSGGGTTTSCEEECC
T ss_pred CCCCCCCCCCEEEEEEEecCCcccCCCCcEEEEEcCCCCCcccCCEEEEECCC---CCccCccceeeEeeC
Confidence 64 664 679999999999 66 7899999999999999999999999985 259999999999973
No 31
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=100.00 E-value=4.3e-60 Score=452.52 Aligned_cols=211 Identities=28% Similarity=0.487 Sum_probs=192.7
Q ss_pred cCCCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCCCCCCCCCCcHHHHHH
Q 019447 11 ALLSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQ 90 (341)
Q Consensus 11 ~~lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~~~~gC~GG~~~~a~~ 90 (341)
..||.++|||++|+||||||||.| |||||||++++||++++|+++++++||||+|+||+. ..||+||++..||+
T Consensus 88 ~~lP~~~DwR~~g~vtpVkdQg~C----GSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~--~~GC~GG~~~~a~~ 161 (312)
T 1xkg_A 88 GNAPAEIDLRQMRTVTPIRMQGGC----GSAWAFSGVAATESAYLAYRDQSLDLAEQELVDCAS--QHGCHGDTIPRGIE 161 (312)
T ss_dssp SCCCSCEETTTTTCCCCCCBCCSS----BCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC--SSTTBCCCHHHHHH
T ss_pred ccCCCccccccCCCcCCccccCCC----CccHHHHHHHHHHHHHHHHhCCCCCcCHHHHHhccC--CCCCCCCCHHHHHH
Confidence 479999999999999999999999 999999999999999999999999999999999982 38999999999999
Q ss_pred HHHHhCCcccCCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHh--CCcEEEEecccc-cccccCCceE
Q 019447 91 FVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA--QPVSVGICGSER-AFQLYSSGIF 167 (341)
Q Consensus 91 ~l~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~--GPV~v~i~~~~~-~f~~y~~GIy 167 (341)
||.+ +||++|++|||.+..+.|. . .....++|.+|..++..++++||++|++ |||+|+|+++.. +|++|++|||
T Consensus 162 yi~~-~Gi~~e~~yPY~~~~~~C~-~-~~~~~~~i~~y~~v~~~~~~~ik~al~~~~GPV~v~i~~~~~~~f~~Y~~GVy 238 (312)
T 1xkg_A 162 YIQH-NGVVQESYYRYVAREQSCR-R-PNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTI 238 (312)
T ss_dssp HHHH-HCEEBGGGSCCCSSCCCCC-C-CSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCCSSSC
T ss_pred HHHH-cCCCccccCCccCCCCCCC-C-CCCceEEEeeEEEeCCCCHHHHHHHHHhcCCCEEEEEEecccccccccCCcEE
Confidence 9988 5999999999999999998 3 3445688999999987789999999986 899999999844 8999999999
Q ss_pred eC-CCC-C-CCCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeecccccccCC
Q 019447 168 TG-PCS-T-SLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKTG 235 (341)
Q Consensus 168 ~~-~~~-~-~~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~~ 235 (341)
.. .|. . . +|||+|||||+++|++|||||||||++|||+|||||+|+. +.|||++.++||++..
T Consensus 239 ~~~~c~~~~~-~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~----n~CgI~~~~~~~~~~~ 304 (312)
T 1xkg_A 239 IQRDNGYQPN-YHAVNIVGYSNAQGVDYWIVRNSWDTNWGDNGYGYFAANI----DLMMIEEYPYVVILGQ 304 (312)
T ss_dssp BCCCCSSCCE-EEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTCCEEEECTT
T ss_pred cCCCCCCCcC-ceEEEEEEEeccCCceEEEEEeCCCCcccCCcEEEEEcCC----CcccccceeEEeeccC
Confidence 75 454 3 5 9999999999999999999999999999999999999983 4999999999998753
No 32
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=100.00 E-value=3.1e-60 Score=453.45 Aligned_cols=213 Identities=40% Similarity=0.790 Sum_probs=193.8
Q ss_pred CCCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCCC-CCCCCCCcHHHHHH
Q 019447 12 LLSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSY-NSGCGGGLMDYAYQ 90 (341)
Q Consensus 12 ~lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~~-~~gC~GG~~~~a~~ 90 (341)
+||.++|||++|+||||||||.| |||||||++++||++++|+++.+++||||+|+||+... +.||+||++..||+
T Consensus 91 ~lP~~~DwR~~g~vtpVkdQg~C----GSCWAfa~~~alE~~~~i~~g~~~~LS~q~lvdC~~~~~~~gC~GG~~~~a~~ 166 (310)
T 2o6x_A 91 AVPDKIDWRESGYVTEVKDQGNC----GSGWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPWGNNGCGGGLMENAYQ 166 (310)
T ss_dssp -CCSCEEGGGGTCCCCCCBCCSS----CCHHHHHHHHHHHHHHHHHHSSCCCBCHHHHHHHCGGGTCCGGGCCCHHHHHH
T ss_pred CCCCeEecCcCCCCCCcccCCCC----CccHHHHhHHHHHHHHHHHhCCCcCcCHHHHHHhhhccCCCCCCCCCHHHHHH
Confidence 69999999999999999999999 99999999999999999999999999999999998643 78999999999999
Q ss_pred HHHHhCCcccCCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHh-CCcEEEEecccccccccCCceEeC
Q 019447 91 FVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTG 169 (341)
Q Consensus 91 ~l~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~-GPV~v~i~~~~~~f~~y~~GIy~~ 169 (341)
||. ++||++|++|||.+..+.|.... ....++|.+|..++..++++||++|++ |||+|+|+++ ++|++|++|||..
T Consensus 167 yi~-~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~~~~v~~~~~~~i~~~l~~~GPV~v~i~~~-~~f~~Y~~Gvy~~ 243 (310)
T 2o6x_A 167 YLK-QFGLETESSYPYTAVEGQCRYNK-QLGVAKVTGFYTVHSGSEVELKNLVGAEGPAAVAVDVE-SDFMMYRSGIYQS 243 (310)
T ss_dssp HHT-TSCBCBTTTSCCCSSCCCCCCCG-GGCCEEEEEEEEECSCCHHHHHHHHHHHCCEEEEECCC-HHHHTEEEEEECC
T ss_pred HHH-HCCcCchhcCCCCCCCCCccCCC-CCCceEeCeEEEeCCCCHHHHHHHHHhcCCeEEEEecc-hhhhhCCCceecC
Confidence 997 67999999999999989997653 345678999999987789999999986 9999999997 6899999999974
Q ss_pred -CCC-CCCCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeecccccccC
Q 019447 170 -PCS-TSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKT 234 (341)
Q Consensus 170 -~~~-~~~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~ 234 (341)
.|+ ..++|||+|||||+++|++|||||||||++|||+|||||+|+. .|.|||++.++||++.
T Consensus 244 ~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~---~n~Cgi~~~~~~p~~~ 307 (310)
T 2o6x_A 244 QTCSPLRVNHAVLAVGYGTQGGTDYWIVKNSWGLSWGERGYIRMVRNR---GNMCGIASLASLPMVA 307 (310)
T ss_dssp SSCCTTCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS---SSGGGTTTSEEEEEEE
T ss_pred CCCCCCCCCEEEEEEEEeccCCceEEEEEeCCCCccCCCcEEEEEcCC---CCcCCccceeeEEEee
Confidence 466 4679999999999999999999999999999999999999985 2599999999999863
No 33
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=100.00 E-value=7.8e-59 Score=446.22 Aligned_cols=215 Identities=27% Similarity=0.513 Sum_probs=184.3
Q ss_pred cCCCCCCCCccC----CCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCC-CcccCHHHHHhhCCCCCCCCCCCcH
Q 019447 11 ALLSFTGHKLQM----ILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGS-LVSLSEQELIDCDRSYNSGCGGGLM 85 (341)
Q Consensus 11 ~~lP~~~D~R~~----g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~-~~~LSeq~l~dc~~~~~~gC~GG~~ 85 (341)
.+||.++|||++ |+||||||||.| |||||||++++||++++|+++. +++||||+|+||+...+.||+||++
T Consensus 70 ~~lP~s~DwR~~w~~~g~vtpVkdQg~C----GSCWAFsa~~alE~~~~i~~~~~~~~LSeQ~LvdC~~~~~~GC~GG~~ 145 (325)
T 3hhi_A 70 APLPSSFDSAEAWPNCPTIPQIADQSAC----GSCWAVAAASAMSDRFCTMGGVQDVHISAGDLLACCSDCGDGCNGGDP 145 (325)
T ss_dssp CCCCSCEEHHHHSTTCTTTTCCCBCCSS----BCHHHHHHHHHHHHHHHHTSSCSSCCBCHHHHHHHCGGGBCTTBCBCH
T ss_pred cCCCCcEehhHhcCCCCccccccCCCCc----cccHHHHHHHHHHHHHHHHhCCCccccCHHHHHHhccCCCCCCCCCCH
Confidence 679999999998 999999999999 9999999999999999999997 8999999999999755789999999
Q ss_pred HHHHHHHHHhCCcccCCcccCC-CC----------CCccccc---------------ccCCceeeeceeEecCCChHHHH
Q 019447 86 DYAYQFVIKNHGIDTEKDYPYR-GQ----------AGQCNKQ---------------KLNRHIVTIDGYKDVPENNEKQL 139 (341)
Q Consensus 86 ~~a~~~l~~~~Gi~~E~~yPY~-~~----------~~~C~~~---------------~~~~~~~~i~~y~~i~~~~~~~i 139 (341)
..||+|++++ ||++|++|||. +. .+.|... ....+.+.+..|. + .++++|
T Consensus 146 ~~A~~yi~~~-Gi~~e~~yPY~~~~c~~~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~y~-v--~~~~~i 221 (325)
T 3hhi_A 146 DRAWAYFSST-GLVSDYCQPYPFPHCSHHSKSKNGYPPCSQFNFDTPKCDYTCDDPTIPVVNYRSWTSYA-L--QGEDDY 221 (325)
T ss_dssp HHHHHHHHHT-CBCBTTTSCCSSCCCBSSSCCTTCCCBGGGCCCCCCCCCSSCSSTTSCCCCBCEEEEEE-E--CSHHHH
T ss_pred HHHHHHHHHh-CCCcccccCCccccccccccccccCCCCCCcccCCcchhhcccccccccceEEeecceE-e--CCHHHH
Confidence 9999999887 99999999998 32 2556510 0112334567777 5 568889
Q ss_pred HHHHH-hCCcEEEEecccccccccCCceEeCCCCCC-CCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEccCCC
Q 019447 140 LQAVV-AQPVSVGICGSERAFQLYSSGIFTGPCSTS-LDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGN 217 (341)
Q Consensus 140 k~al~-~GPV~v~i~~~~~~f~~y~~GIy~~~~~~~-~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~ 217 (341)
|++|+ +|||+|+|+++ ++|++|++|||...+... ++|||+|||||+++|++|||||||||++|||+|||||+|+.+
T Consensus 222 ~~~i~~~GPV~v~i~~~-~~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~~g~~YWivkNSWG~~WGe~GY~~i~rg~n- 299 (325)
T 3hhi_A 222 MRELFFRGPFEVAFDVY-EDFIAYNSGVYHHVSGQYLGGHAVRLVGWGTSNGVPYWKIANSWNTEWGMDGYFLIRRGSS- 299 (325)
T ss_dssp HHHHHHHCCEEEEEEEE-HHHHTCCSSEECCCSCCEEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSC-
T ss_pred HHHHHHCCCEEEEEEec-cccccccCceecCCCCCCCCCEEEEEEEEEecCCceEEEEEeCCCCCcccCCEEEEEcCCC-
Confidence 99886 59999999997 799999999998766554 499999999999999999999999999999999999999854
Q ss_pred CCCceeeeecccccccCCCCC
Q 019447 218 SLGICGINMLASYPTKTGQNP 238 (341)
Q Consensus 218 ~~~~CgI~~~~~~p~~~~~~p 238 (341)
.|||++.+++++...++.
T Consensus 300 ---~CGI~~~~~~g~p~~~~~ 317 (325)
T 3hhi_A 300 ---ECGIEDGGSAGIPLAPNT 317 (325)
T ss_dssp ---GGGTTSCEEEEEEC----
T ss_pred ---eecCccceEEeecCCCCc
Confidence 999999999888765543
No 34
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=100.00 E-value=1.6e-56 Score=421.67 Aligned_cols=217 Identities=24% Similarity=0.497 Sum_probs=185.4
Q ss_pred CccccCCCCCCCCccC---CCCCCccCCC---CcCCCCCchHHHHHHHHHHHHHHHHcC-C--CcccCHHHHHhhCCCCC
Q 019447 7 LEDLALLSFTGHKLQM---ILLIQFRNKS---SCLYLLGACWAFSATGAIEGINKIVTG-S--LVSLSEQELIDCDRSYN 77 (341)
Q Consensus 7 ~~~~~~lP~~~D~R~~---g~vtpVkdQg---~c~~~~GsCWAfA~~~alE~~~~i~~~-~--~~~LSeq~l~dc~~~~~ 77 (341)
..+..+||.++|||++ ++|+|||||| .| |||||||++++||++++|+++ . .++||||+|+||+. .
T Consensus 30 ~~~~~~lP~~~DwR~~~~~~~vtpVkdQg~~~~C----GSCWAfa~~~alE~~~~i~~~g~~~~~~LS~Q~lvdC~~--~ 103 (277)
T 1deu_A 30 YLSPADLPKSWDWRNVDGVNYASITRNQHIPQYC----GSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGN--A 103 (277)
T ss_dssp CCCGGGSCSCEETTSBTTBCCCCCCCBTTCSSCC----BCHHHHHHHHHHHHHHHHHTTTCSSCCCBCHHHHHHHSS--S
T ss_pred ccccccCCCceecccCCCCCcCCccccCCCCCCC----cchHHHHHHHHHHHHHHHHhCCCCCCcccCHHHHHhCcC--C
Confidence 3456789999999998 6899999999 99 999999999999999999875 3 47999999999996 4
Q ss_pred CCCCCCcHHHHHHHHHHhCCcccCCcccCCCCCCcccc-cc-------------cCCceeeeceeEecCCChHHHHHHHH
Q 019447 78 SGCGGGLMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNK-QK-------------LNRHIVTIDGYKDVPENNEKQLLQAV 143 (341)
Q Consensus 78 ~gC~GG~~~~a~~~l~~~~Gi~~E~~yPY~~~~~~C~~-~~-------------~~~~~~~i~~y~~i~~~~~~~ik~al 143 (341)
.||+||++..||+||.++ ||++|++|||...+..|.. .. .+...+++..|..++. +++||++|
T Consensus 104 ~gC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~c~~~~~~~~~~i~~y~~v~~--~~~i~~~i 180 (277)
T 1deu_A 104 GSCEGGNDLSVWDYAHQH-GIPDETCNNYQAKDQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLSG--REKMMAEI 180 (277)
T ss_dssp EETBEECHHHHHHHHHHT-CBCBGGGSCCCSSCCCCCHHHHSEEEEETTEEEECSSCCCBCEEEEEEECS--HHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHc-CCCcCccCCCcCCCCCccccccccccccCcccccccCcceEEeceeEecCC--HHHHHHHH
Confidence 899999999999999775 9999999999998888873 11 1224567888888853 66788777
Q ss_pred H-hCCcEEEEecccccccccCCceEeCC-CCCCCCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEccCC-CCC-
Q 019447 144 V-AQPVSVGICGSERAFQLYSSGIFTGP-CSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTG-NSL- 219 (341)
Q Consensus 144 ~-~GPV~v~i~~~~~~f~~y~~GIy~~~-~~~~~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r~~~-~~~- 219 (341)
+ +|||+++|+++ ++|+.|++|||... +...++|||+|||||+++|++|||||||||++|||+|||||+|+.+ .+.
T Consensus 181 ~~~GPV~v~i~~~-~~f~~Y~~GIy~~~~~~~~~~HaV~iVGyg~~~g~~YWivkNSWG~~WGe~GY~~i~rg~n~~g~g 259 (277)
T 1deu_A 181 YANGPISCGIMAT-ERLANYTGGIYAEYQDTTYINHVVSVAGWGISDGTEYWIVRNSWGEPWGERGWLRIVTSTYKDGKG 259 (277)
T ss_dssp HHHCCEEEEECCC-HHHHTCCSSEECBCCSCCCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECTTHHHHTG
T ss_pred HHcCCEEEEEecc-cccccCcCcEECCCCCCCcCCeEEEEEEecccCCccEEEEEeCCCCccCCCcEEEEEcCCCccccc
Confidence 6 59999999997 68999999999764 3456799999999999999999999999999999999999999864 111
Q ss_pred --Cceeeeeccccccc
Q 019447 220 --GICGINMLASYPTK 233 (341)
Q Consensus 220 --~~CgI~~~~~~p~~ 233 (341)
..|||++.++|++.
T Consensus 260 ~~~~cgIe~~~~~~~p 275 (277)
T 1deu_A 260 ARYNLAIEEHCTFGDP 275 (277)
T ss_dssp GGTBTTTTSCEEEEEE
T ss_pred ccccceeccccEeecc
Confidence 27999999999875
No 35
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=100.00 E-value=1.3e-56 Score=419.87 Aligned_cols=214 Identities=29% Similarity=0.537 Sum_probs=178.9
Q ss_pred cCCCCCCCCccC----CCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcC--CCcccCHHHHHhhCCC-CCCCCCCC
Q 019447 11 ALLSFTGHKLQM----ILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTG--SLVSLSEQELIDCDRS-YNSGCGGG 83 (341)
Q Consensus 11 ~~lP~~~D~R~~----g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~--~~~~LSeq~l~dc~~~-~~~gC~GG 83 (341)
.+||.++|||++ +.|+||||||.| |||||||++++||++++|+++ .+++||||+|+||+.. .+.||+||
T Consensus 5 ~~lP~~~D~R~~w~~~~~vt~VkdQg~C----GSCWAfa~~~ale~~~~i~~~~~~~~~LS~q~lvdC~~~~~~~gC~GG 80 (266)
T 3cbj_A 5 LKLPASFDAREQWPQCPTIKEIRDQGSC----GSAWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGG 80 (266)
T ss_dssp CCCCSCEEHHHHSTTCGGGGCCCBCCSS----BCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHCGGGGBCTTBCB
T ss_pred CCCCccCcchhccCCCCcCCCCCCCCCc----chHHHHHHHHHHHHHHHHHhCCCCccccCHHHHHhhccccCCCCCCCC
Confidence 479999999987 889999999999 999999999999999999876 4789999999999853 36899999
Q ss_pred cHHHHHHHHHHhCCccc-------CCcccCC---------CCCCcccccc-------------c----CCceeeeceeEe
Q 019447 84 LMDYAYQFVIKNHGIDT-------EKDYPYR---------GQAGQCNKQK-------------L----NRHIVTIDGYKD 130 (341)
Q Consensus 84 ~~~~a~~~l~~~~Gi~~-------E~~yPY~---------~~~~~C~~~~-------------~----~~~~~~i~~y~~ 130 (341)
++..||+|+.++ |+++ |++|||. +..+.|.... . ..+.+.+..| .
T Consensus 81 ~~~~a~~y~~~~-Gi~~~~~Y~~~e~~~PY~~~~~~~~~~~~~~~C~~~~~~p~c~~~c~~~~~~~~~~~~~~~~~~~-~ 158 (266)
T 3cbj_A 81 YPAEAWNFWTRK-GLVSGGLYESHVGCRPYSIPPCEAHVNGARPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSY-S 158 (266)
T ss_dssp CHHHHHHHHHHT-CBCBCCSTTCCCSSSCCCSCCCSCCCSCSSCCCCSCCCCCCCCCSCCTTCCSCTGGGCBCBSCCE-E
T ss_pred CHHHHHHHHHHh-CcCcCccccccccccCcccccccccccCCCCCCccccCCCccccccCCCCcceeeeeeeeeeeeE-E
Confidence 999999999875 9999 9999998 3345553210 0 0012233333 4
Q ss_pred cCCChHHHHHHHHHh-CCcEEEEecccccccccCCceEeCCCCCC-CCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcE
Q 019447 131 VPENNEKQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTGPCSTS-LDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGY 208 (341)
Q Consensus 131 i~~~~~~~ik~al~~-GPV~v~i~~~~~~f~~y~~GIy~~~~~~~-~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY 208 (341)
++ .++++||++|++ |||+++|+++ ++|++|++|||...+... ++|||+|||||+++|++|||||||||++|||+||
T Consensus 159 v~-~~~~~i~~~i~~~GPV~v~i~~~-~~f~~Y~~Gvy~~~~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy 236 (266)
T 3cbj_A 159 VS-NSEKDIMAEIYKNGPVEGAFSVY-SDFLLYKSGVYQHVTGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGF 236 (266)
T ss_dssp CC-SCHHHHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCCSSCEEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTE
T ss_pred eC-CCHHHHHHHHHhcCCEEEEEEec-cchhhcCCeEEecCCCCccCCeEEEEEEecccCCceEEEEEcCCCCccCCCCE
Confidence 55 468889988875 9999999996 689999999998766544 4899999999999999999999999999999999
Q ss_pred EEEEccCCCCCCceeeeecccccccCCC
Q 019447 209 MHMQRNTGNSLGICGINMLASYPTKTGQ 236 (341)
Q Consensus 209 ~~i~r~~~~~~~~CgI~~~~~~p~~~~~ 236 (341)
|||+|+. +.|||++.+++++....
T Consensus 237 ~~i~rg~----n~cgI~~~~~~~~p~~~ 260 (266)
T 3cbj_A 237 FKILRGQ----DHCGIESEVVAGIPRTD 260 (266)
T ss_dssp EEEECSS----CGGGTTTSCEECCBCCC
T ss_pred EEEEcCC----CcccccCceEEEEeecc
Confidence 9999985 48999999998876543
No 36
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=100.00 E-value=2e-56 Score=415.93 Aligned_cols=209 Identities=30% Similarity=0.575 Sum_probs=174.6
Q ss_pred CCCCCCCCccC----CCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcC--CCcccCHHHHHhhCCCCCCCCCCCcH
Q 019447 12 LLSFTGHKLQM----ILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTG--SLVSLSEQELIDCDRSYNSGCGGGLM 85 (341)
Q Consensus 12 ~lP~~~D~R~~----g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~--~~~~LSeq~l~dc~~~~~~gC~GG~~ 85 (341)
+||.++|||++ ++||||||||.| |||||||++++||++++|+++ .+++||||+|+||....+.||+||++
T Consensus 2 ~lP~s~D~R~~~~~~~~vtpVkdQg~C----GSCWAFaa~~ale~~~~i~~~~~~~~~LSeQ~lvdC~~~~~~GC~GG~~ 77 (254)
T 3qsd_A 2 EIPSSFDSRKKWPRCKSIATIRDQSRC----GSCWAFGAVEAMSDRSCIQSGGKQNVELSAVDLLSCCESCGLGCEGGIL 77 (254)
T ss_dssp CCCSCEEHHHHCTTCGGGGCCCBCCSS----BCHHHHHHHHHHHHHHHHHTTTCCCCCBCHHHHHHHCTTSBCTTBCBCH
T ss_pred CCCCcCccccccCCCCccCCCCCcccC----ccHHHHHHHHHHHHHHHHHhCCCccccCCHHHHHhhhcCCCCCCCCCCH
Confidence 58999999998 799999999999 999999999999999999986 68999999999998756789999999
Q ss_pred HHHHHHHHHhCCcccCCcc-------cCC---------CCCCcccccc----------c---C-----CceeeeceeEec
Q 019447 86 DYAYQFVIKNHGIDTEKDY-------PYR---------GQAGQCNKQK----------L---N-----RHIVTIDGYKDV 131 (341)
Q Consensus 86 ~~a~~~l~~~~Gi~~E~~y-------PY~---------~~~~~C~~~~----------~---~-----~~~~~i~~y~~i 131 (341)
..||+||+++ ||++|++| ||. +..+.|.... . . .+.+.. ....+
T Consensus 78 ~~a~~yi~~~-Gi~~e~~y~~~~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~~-~~~~~ 155 (254)
T 3qsd_A 78 GPAWDYWVKE-GIVTGSSKENHAGCEPYPFPKCEHHTKGKYPPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRGK-SSYNV 155 (254)
T ss_dssp HHHHHHHHHT-CBCBCCCTTTCCSSSCCSSCCCBCSSCSSSCBCCSCCCCCCCCCCCCCTTCCSCGGGGCBCCS-EEEEC
T ss_pred HHHHHHHHHc-CCCcccccccCcCcCCcccccccccccCcCCCCcccccCCccccccccCCccceeeeeeeeee-eeEec
Confidence 9999999876 99999998 996 3334453210 0 0 001111 12244
Q ss_pred CCChHHHHHHHHHh-CCcEEEEecccccccccCCceEeCCCCCC-CCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEE
Q 019447 132 PENNEKQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTGPCSTS-LDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYM 209 (341)
Q Consensus 132 ~~~~~~~ik~al~~-GPV~v~i~~~~~~f~~y~~GIy~~~~~~~-~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~ 209 (341)
+. ++++||++|++ |||+++|+++ ++|++|++|||...+... ++|||+|||||++++++|||||||||++|||+|||
T Consensus 156 ~~-~~~~i~~~l~~~gPv~~~~~~~-~~f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~ 233 (254)
T 3qsd_A 156 KN-DEKAIQKEIMKYGPVEAGFTVY-EDFLNYKSGIYKHITGETLGGHAIRIIGWGVENKAPYWLIANSWNEDWGENGYF 233 (254)
T ss_dssp CS-CHHHHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCCSSCEEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEE
T ss_pred CC-cHHHHHHHHHHcCCEEEEEEec-cccccccCCeeccCCCCCCCCeEEEEEEEeecCCeeEEEEEeCCCCCcccCCeE
Confidence 43 68889988875 9999999996 789999999997765544 48999999999999999999999999999999999
Q ss_pred EEEccCCCCCCceeeeecccccc
Q 019447 210 HMQRNTGNSLGICGINMLASYPT 232 (341)
Q Consensus 210 ~i~r~~~~~~~~CgI~~~~~~p~ 232 (341)
||+|+.+ .|||++.+++.+
T Consensus 234 ~i~rg~n----~CgI~~~~~~~~ 252 (254)
T 3qsd_A 234 RIVRGRD----ECSIESEVTAGR 252 (254)
T ss_dssp EEECSSC----GGGTTSSEEEEE
T ss_pred EEEcCCC----eecCCCceEeec
Confidence 9999854 999999887765
No 37
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=100.00 E-value=8.2e-56 Score=439.79 Aligned_cols=213 Identities=31% Similarity=0.611 Sum_probs=182.7
Q ss_pred cccCCCCCCCCccCC---CCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCc--ccCHHHHHhhCCCCCCCCCCC
Q 019447 9 DLALLSFTGHKLQMI---LLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLV--SLSEQELIDCDRSYNSGCGGG 83 (341)
Q Consensus 9 ~~~~lP~~~D~R~~g---~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~--~LSeq~l~dc~~~~~~gC~GG 83 (341)
...+||.++|||+++ +||||||||.| |||||||++++||++++|+++.++ .||||+|+||+. .+.||+||
T Consensus 203 ~~~~lP~s~DwR~~~g~~~VtpVkdQG~C----GSCWAFsa~~alE~~~~i~tg~~~~~~LSeQ~LvdC~~-~~~GC~GG 277 (441)
T 3pdf_A 203 KILFLPTSWDWRNVHGINFVSPVRNQASC----GSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQ-YAQGCEGG 277 (441)
T ss_dssp ---CCCSCEETTCBTTBCCSCCCCBCTTS----BCHHHHHHHHHHHHHHHHHHTTSCCCCBCHHHHHHHCT-TSCTTBCC
T ss_pred ccccCCCCEECCcCCCCCccCcccccCCC----chHHHHHHHHHHHHHHHHhccCCCccccCHHHHHhhcc-CCCCCCCC
Confidence 346899999999964 89999999999 999999999999999999999765 499999999996 58999999
Q ss_pred cHHHH-HHHHHHhCCcccCCcccCCCCCCcccccccCCceeeeceeEecC----CChHHHHHHHHH-hCCcEEEEecccc
Q 019447 84 LMDYA-YQFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVP----ENNEKQLLQAVV-AQPVSVGICGSER 157 (341)
Q Consensus 84 ~~~~a-~~~l~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~----~~~~~~ik~al~-~GPV~v~i~~~~~ 157 (341)
++..| ++|+.++ ||++|++|||.+..+.|..... ...+.+.+|..++ ..++++||++|+ +|||+|+|+++ +
T Consensus 278 ~~~~aa~~yi~~~-Gi~tE~~yPY~~~~~~C~~~~~-~~~~~~~~y~~v~~~~~~~~e~~ik~al~~~GPVsvai~a~-~ 354 (441)
T 3pdf_A 278 FPYLIAGKYAQDF-GLVEEACFPYTGTDSPCKMKED-CFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVY-D 354 (441)
T ss_dssp CHHHHTTHHHHHT-CBCBGGGSCCCSSCCCSCCCSS-CCCBCEEEEEETTSSTTCCCHHHHHHHHHHHCCEEEEECCC-G
T ss_pred chhHHHHHHHHhc-CCCcHHHeeecccCCCCCCccc-cceeeeccEEEeCCccCCCcHHHHHHHHHHCCCeEEEEEec-c
Confidence 99987 8999765 9999999999999999986432 3345677888775 356888888877 49999999997 7
Q ss_pred cccccCCceEeCCCC-------CCCCceEEEEEeeec--CCeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeecc
Q 019447 158 AFQLYSSGIFTGPCS-------TSLDHAVLIVGYDSE--NGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLA 228 (341)
Q Consensus 158 ~f~~y~~GIy~~~~~-------~~~~HaV~IVGyg~~--~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~ 228 (341)
+|++|++|||..+.. ..++|||+|||||++ +|++|||||||||++|||+|||||+|+.+ .|||++.+
T Consensus 355 ~F~~Y~sGVy~~~~~~~~~~~~~~~~HaV~iVGyG~~~~~G~~YWIVkNSWG~~WGe~GYfri~rg~n----~CGI~s~~ 430 (441)
T 3pdf_A 355 DFLHYKKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGTD----ECAIESIA 430 (441)
T ss_dssp GGGGCCSSEECCC---CCCCCCCCCCEEEEEEEEEECTTTCCEEEEEECSBCTTSTBTTEEEEECSSC----GGGTTSCC
T ss_pred cccccCCceEecCCCCcccCCCCcCCeEEEEEEecccCCCCceEEEEEcCCCCCcCCCeEEEEEcCCC----ccCCCCce
Confidence 999999999965432 247999999999985 68999999999999999999999999864 99999998
Q ss_pred ccccc
Q 019447 229 SYPTK 233 (341)
Q Consensus 229 ~~p~~ 233 (341)
.++..
T Consensus 431 ~a~~P 435 (441)
T 3pdf_A 431 VAATP 435 (441)
T ss_dssp EEEEE
T ss_pred EEeec
Confidence 87653
No 38
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=100.00 E-value=1.7e-56 Score=428.81 Aligned_cols=212 Identities=28% Similarity=0.526 Sum_probs=177.4
Q ss_pred ccCCCCCCCCccC----CCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCC--CcccCHHHHHhhCC-CCCCCCCC
Q 019447 10 LALLSFTGHKLQM----ILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGS--LVSLSEQELIDCDR-SYNSGCGG 82 (341)
Q Consensus 10 ~~~lP~~~D~R~~----g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~--~~~LSeq~l~dc~~-~~~~gC~G 82 (341)
..+||.++|||++ +.|+||||||.| |||||||++++||++++|+++. +++||||+|+||+. ..+.||+|
T Consensus 61 ~~~lP~s~DwR~~~~~c~~vtpVkdQg~C----GSCWAFsa~~ale~~~~i~~~~~~~~~LSeq~LvdC~~~~~~~GC~G 136 (317)
T 3pbh_A 61 DLKLPASFDAREQWPQCPTIKEIRDQGSC----GSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNG 136 (317)
T ss_dssp CCCCCSSEEHHHHCTTCGGGTCCCBCCSS----CCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHSCTTTBCGGGC
T ss_pred ccCCCCCEechhccCCCCCcCCccccCCc----cchHHHHHHHHHHHHHHHHhCCCCcccCCHHHHHHhccccCCCCCCC
Confidence 3689999999998 689999999999 9999999999999999999875 79999999999987 45789999
Q ss_pred CcHHHHHHHHHHhCCcccCCcc-------cCCC---------CCCcccccccC----------C-------ceeeeceeE
Q 019447 83 GLMDYAYQFVIKNHGIDTEKDY-------PYRG---------QAGQCNKQKLN----------R-------HIVTIDGYK 129 (341)
Q Consensus 83 G~~~~a~~~l~~~~Gi~~E~~y-------PY~~---------~~~~C~~~~~~----------~-------~~~~i~~y~ 129 (341)
|++..||+|++++ ||++|.+| ||.. ..+.|...... . +.+. ..+.
T Consensus 137 G~~~~A~~yi~~~-Gi~te~~Y~~~~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~c~~~c~~~~~~~~~~~~~~~-~~~~ 214 (317)
T 3pbh_A 137 GYPAEAWNFWTRK-GLVSGGLYESHVGCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYG-YNSY 214 (317)
T ss_dssp BCHHHHHHHHHHT-CEEBBCSTTCCCBSSCCCSCCCCCCCTTCCSCCCSCCCCCCCCCSCCSSCCSCGGGSEECB-CCCE
T ss_pred CCHHHHHHHHHHh-CCCcchhccCCCCCcCcccCcccccccCcCCCCCCcCCCCcccccccCCCccceeeeeeee-eecc
Confidence 9999999999887 99999999 9984 23455421000 0 0111 1223
Q ss_pred ecCCChHHHHHHHHH-hCCcEEEEecccccccccCCceEeCCCCCCC-CceEEEEEeeecCCeeEEEEEcCCCCCCCCCc
Q 019447 130 DVPENNEKQLLQAVV-AQPVSVGICGSERAFQLYSSGIFTGPCSTSL-DHAVLIVGYDSENGVDYWIIKNSWGRSWGMNG 207 (341)
Q Consensus 130 ~i~~~~~~~ik~al~-~GPV~v~i~~~~~~f~~y~~GIy~~~~~~~~-~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~G 207 (341)
.++. ++++||++|+ +|||+|+|+++ ++|++|++|||...++... +|||+|||||+++|++|||||||||++|||+|
T Consensus 215 ~v~~-~e~~i~~~i~~~GPV~v~i~~~-~~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~~g~~YWivkNSWG~~WGe~G 292 (317)
T 3pbh_A 215 SVSN-SEKDIMAEIYKNGPVEGAFSVY-SDFLLYKSGVYQHVTGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNG 292 (317)
T ss_dssp EECS-CHHHHHHHHHHHCCEEEEEEEE-GGGGGEEEEEECCCSCCEEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTT
T ss_pred cCCc-HHHHHHHHHHHCCCEEEEEEec-ccccCCCCcEEccCCCCCCCCEEEEEEEEEEeCCeeEEEEEcCCCCCcCCCc
Confidence 4543 5788888876 59999999996 7999999999987776554 89999999999999999999999999999999
Q ss_pred EEEEEccCCCCCCceeeeeccccccc
Q 019447 208 YMHMQRNTGNSLGICGINMLASYPTK 233 (341)
Q Consensus 208 Y~~i~r~~~~~~~~CgI~~~~~~p~~ 233 (341)
||||+|+.+ .|||++.++..+.
T Consensus 293 Y~ri~rg~n----~CgI~~~~~a~~p 314 (317)
T 3pbh_A 293 FFKILRGQD----HCGIESEVVAGIP 314 (317)
T ss_dssp EEEEECSSC----GGGTTTSCEECCB
T ss_pred EEEEEcCCC----cccCCCceEeeec
Confidence 999999864 9999998887653
No 39
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=100.00 E-value=3.2e-51 Score=382.82 Aligned_cols=209 Identities=24% Similarity=0.432 Sum_probs=164.0
Q ss_pred CCCCCccC-CCCC--CccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCC-CCCCCCCCcH-HHHH
Q 019447 15 FTGHKLQM-ILLI--QFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRS-YNSGCGGGLM-DYAY 89 (341)
Q Consensus 15 ~~~D~R~~-g~vt--pVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~-~~~gC~GG~~-~~a~ 89 (341)
...|||++ |.++ ||||||.| |||||||++++||++++++++++++||||+|+||+.. .+.||+||.+ ..++
T Consensus 9 ~~~dWR~~~~~~~it~VkdQg~C----GSCWAFaa~~alE~~~~i~~~~~~~LS~Q~lvdC~~~~~~~GC~GG~~~~~~~ 84 (265)
T 2wbf_X 9 YCNRLKDENNCISNLQVEDQGNC----DTSWIFASKYHLETIRCMKGYEPTKISALYVANCYKGEHKDRCDEGSSPMEFL 84 (265)
T ss_dssp CBCGGGCTTSTGGGSCCCBCTTS----SCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHCCSSSCCCTTTCCCCHHHHH
T ss_pred HHHhhccCCCCCCCCCCcCCCCC----hhHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHhhcccCCCCCCCCCCHHHHH
Confidence 56899999 6877 99999999 9999999999999999999999999999999999964 3789999964 4556
Q ss_pred HHHHHhCCcccCCcccCCCC--CCccccccc----------------CCceeeeceeEecCCC----h----HHHHHHHH
Q 019447 90 QFVIKNHGIDTEKDYPYRGQ--AGQCNKQKL----------------NRHIVTIDGYKDVPEN----N----EKQLLQAV 143 (341)
Q Consensus 90 ~~l~~~~Gi~~E~~yPY~~~--~~~C~~~~~----------------~~~~~~i~~y~~i~~~----~----~~~ik~al 143 (341)
+|+.+++||++|++|||... .+.|..... ....+++.+|..++.. + +++||++|
T Consensus 85 ~~i~~~Ggi~~e~~yPY~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ik~~i 164 (265)
T 2wbf_X 85 QIIEDYGFLPAESNYPYNYVKVGEQCPKVEDHWMNLWDNGKILHNKNEPNSLDGKGYTAYESERFHDNMDAFVKIIKTEV 164 (265)
T ss_dssp HHHHHHCCCCBTTTSCCCGGGTTSCCCCCCTTCCCTTTTCEECCCCCSSSTTCCSSEEEEEGGGGTTCHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCccccCCcCCCCCCCCCCccccccccccccccccccCCCceeecCCceEeeccccccchhhHHHHHHHHH
Confidence 77767755999999999863 467764321 1223567788776542 2 46888888
Q ss_pred Hh-CCcEEEEecccccccccC-CceE-eCCCCC-CCCceEEEEEeeec---CC--eeEEEEEcCCCCCCCCCcEEEEEcc
Q 019447 144 VA-QPVSVGICGSERAFQLYS-SGIF-TGPCST-SLDHAVLIVGYDSE---NG--VDYWIIKNSWGRSWGMNGYMHMQRN 214 (341)
Q Consensus 144 ~~-GPV~v~i~~~~~~f~~y~-~GIy-~~~~~~-~~~HaV~IVGyg~~---~g--~~yWiVkNSWG~~WGe~GY~~i~r~ 214 (341)
++ |||+++|++. +|+.|+ +|++ ...|+. .++|||+|||||++ +| ++|||||||||++|||+|||||+|+
T Consensus 165 ~~~GPV~v~i~~~--~f~~y~~~g~~~~~~c~~~~~~HaV~iVGyG~~~~~~g~~~~YWivkNSWG~~WGe~GY~ri~~~ 242 (265)
T 2wbf_X 165 MNKGSVIAYIKAE--NVMGYEFSGKKVKNLCGDDTADHAVNIVGYGNYVNSEGEKKSYWIVRNSWGPYWGDEGYFKVDMY 242 (265)
T ss_dssp HHHSCEEEEECGG--GGCSGGGGSSSEECCCCCSCCCEEEEEEEEEEEECTTSCEEEEEEEECSBCTTSTBTTEEEEESS
T ss_pred HhcCCEEEEEEcc--cccccccCCcEEcCCCCCCcCCEEEEEEEEeCCcccCCCcCCEEEEEcCCCCccCCCCEEEEEec
Confidence 75 9999999984 577774 4432 334554 57999999999985 55 6899999999999999999999985
Q ss_pred CCCCCCceeeee---cccccc
Q 019447 215 TGNSLGICGINM---LASYPT 232 (341)
Q Consensus 215 ~~~~~~~CgI~~---~~~~p~ 232 (341)
. .+.|||+. .+.|++
T Consensus 243 g---~n~Cgi~~~~~~~~~~~ 260 (265)
T 2wbf_X 243 G---PTHCHFNFIHSVVIFNV 260 (265)
T ss_dssp C---CTTCSSCSCCEEEEECE
T ss_pred C---CCccCcceeEEEEeccc
Confidence 3 35899555 555553
No 40
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=100.00 E-value=5.1e-48 Score=366.08 Aligned_cols=192 Identities=22% Similarity=0.282 Sum_probs=160.7
Q ss_pred cCCCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHH--hhCCC--C-CCCCCCCcH
Q 019447 11 ALLSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELI--DCDRS--Y-NSGCGGGLM 85 (341)
Q Consensus 11 ~~lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~--dc~~~--~-~~gC~GG~~ 85 (341)
.+||.++|||+++ ||||||.| |||||||++++||++++ ++++.+.||+|+|+ +|... . ..+|.||++
T Consensus 55 ~~lP~s~DwR~~~---pVkdQG~C----GSCWAFAa~~alE~~~~-~~g~~~~lS~q~l~~~~c~~~~~~~~~~c~GG~~ 126 (291)
T 3ois_A 55 AALPPKVDLTPPF---QVYDQGRI----GSCTANALAAAIQFERI-HDKQSPEFIPSRLFIYYNERKIEGHVNYDSGAMI 126 (291)
T ss_dssp HTCCSEEECCCSS---CCCBCTTS----SCHHHHHHHHHHHHHHH-HTTCSSCCCBCHHHHHHHHHHHSSCTTSCCCEEH
T ss_pred ccCCcceecccCC---CcccCCCC----ccHHHHHHHHHHHHHHH-HhCCCCCcCcCHHHHHhhhhhhhcCCCCCCCcCH
Confidence 4799999999984 99999999 99999999999998875 56778899999998 67632 2 346889999
Q ss_pred HHHHHHHHHhCCcccCCcccCCCCC---Cccccc-------c------cCCceeeeceeEecCCChHHHHHHHHHh-CCc
Q 019447 86 DYAYQFVIKNHGIDTEKDYPYRGQA---GQCNKQ-------K------LNRHIVTIDGYKDVPENNEKQLLQAVVA-QPV 148 (341)
Q Consensus 86 ~~a~~~l~~~~Gi~~E~~yPY~~~~---~~C~~~-------~------~~~~~~~i~~y~~i~~~~~~~ik~al~~-GPV 148 (341)
..||+|+.++ ||++|++|||.+.+ +.|... . .....++|.+|..++. ++++||++|++ |||
T Consensus 127 ~~A~~yi~~~-Gi~~e~~yPY~~~~~~~~~C~~~~~~~~~~~p~~~C~~~~~~~~i~~y~~v~~-~e~~i~~al~~~gPV 204 (291)
T 3ois_A 127 RDGIKVLHKL-GVCPEKEWPYGDTPADPRTEEFPPGAPASKKPSDQCYKDAQNYKITEYSRVAQ-DIDHLKACLAVGSPF 204 (291)
T ss_dssp HHHHHHHHHT-CCCBGGGSCCCCCCCCTTTCSCCTTCGGGSCCCHHHHHHHGGGCCCEEEECCS-CHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHh-CCCCHhhCCCCCCccccccccccccccccCCCCHHHHhhcccceeccEEEcCc-CHHHHHHHHHcCCCE
Confidence 9999999876 99999999999863 345431 0 1224578899999987 68999999997 799
Q ss_pred EEEEecccccccccCC--ceEeCCC-CC--CCCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEccC
Q 019447 149 SVGICGSERAFQLYSS--GIFTGPC-ST--SLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNT 215 (341)
Q Consensus 149 ~v~i~~~~~~f~~y~~--GIy~~~~-~~--~~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r~~ 215 (341)
+++|+++ ++|+.|++ |||..+. .. .++|||+|||||+ +++|||||||||++|||+|||||+|+.
T Consensus 205 ~v~~~~~-~~f~~y~~~~Gi~~~~~~~~~~~~~Hav~iVGy~~--~~~ywivkNSWG~~WG~~Gy~~i~~~~ 273 (291)
T 3ois_A 205 VFGFSVY-NSWVGNNSLPVRIPLPTKNDTLEGGHAVLCVGYDD--EIRHFRIRNSWGNNVGEDGYFWMPYEY 273 (291)
T ss_dssp EEEEEEE-HHHHGGGCCCSBCCCCCTTSCEEEEEEEEEEEEET--TTTEEEEECSBCTTSTBTTEEEEEHHH
T ss_pred EEEEEec-cchhhcCCCCeEEeCCCCCCCCcCCeEEEEEEEeC--CCCEEEEEeCCCCCCCCCcEEEEEHHH
Confidence 9999997 78999998 9996543 22 2489999999984 578999999999999999999999984
No 41
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=100.00 E-value=2.6e-38 Score=313.12 Aligned_cols=208 Identities=17% Similarity=0.216 Sum_probs=158.6
Q ss_pred cCCCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHH-cCCCcccCH----------------HHHHhhC
Q 019447 11 ALLSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIV-TGSLVSLSE----------------QELIDCD 73 (341)
Q Consensus 11 ~~lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~-~~~~~~LSe----------------q~l~dc~ 73 (341)
..++..++++....+|||||||+| |+|||||++++||+.++++ +++.++||| |+|+||+
T Consensus 46 ~~~~~~F~~~~~~~~tpVknQg~c----GsCWaFs~~~~le~~~~~k~~~~~~~lSe~yl~fwDKlEkan~flq~lidc~ 121 (453)
T 2cb5_A 46 QRAQHVFQHAVPQEGKPITNQKSS----GRSWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTA 121 (453)
T ss_dssp HHCCCCCSEECSCCCSSCCBCCBS----SCHHHHHHHHHHHHHHHHHTTCSCCCBCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCceeeeeccCCCCcccCCCc----cchHhhhhHHHHHHHHHHHhcCCeEeeChHHHHHHHHHHHhhHHHHHHHHHH
Confidence 456778888888899999999999 9999999999999999998 578999999 9999997
Q ss_pred CC-------------CCCCCCCCcHHHHHHHHHHhCCcccCCcccCCCCC---------------------------C--
Q 019447 74 RS-------------YNSGCGGGLMDYAYQFVIKNHGIDTEKDYPYRGQA---------------------------G-- 111 (341)
Q Consensus 74 ~~-------------~~~gC~GG~~~~a~~~l~~~~Gi~~E~~yPY~~~~---------------------------~-- 111 (341)
.. .+.||+||.+..|++++.+ +||++|+.|||.... +
T Consensus 122 ~~~~~~d~R~v~~l~~~~gcdGG~~~~a~~~i~k-yGl~p~~~yP~~~~s~ns~~mn~~L~~kLr~~a~~LR~~~~~g~~ 200 (453)
T 2cb5_A 122 QRKEPEDGRLVQFLLMNPANDGGQWDMLVNIVEK-YGVIPKKCFPESYTTEATRRMNDILNHKMREFCIRLRNLVHSGAT 200 (453)
T ss_dssp HTTCCTTSHHHHHHHHCTTCSCBCHHHHHHHHHH-HCCCBGGGSCCCTGGGBCHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred hccCCcchhhHHHhcCCCCCCCCChHHHHHHHHH-cCccchhhccccccccchHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 53 2689999999999999965 599999999998631 1
Q ss_pred ----c----------------c----------ccccc----------CC-----ce--e--eeceeEe------------
Q 019447 112 ----Q----------------C----------NKQKL----------NR-----HI--V--TIDGYKD------------ 130 (341)
Q Consensus 112 ----~----------------C----------~~~~~----------~~-----~~--~--~i~~y~~------------ 130 (341)
. | ..... ++ .. . .+++|..
T Consensus 201 ~~~l~~~k~~~l~~iy~il~~clG~pP~~F~~~~~dkd~~~~~~~~~TP~~F~~~~~~~~~~~~~yv~l~n~p~~~~py~ 280 (453)
T 2cb5_A 201 KGEISATQDVMMEEIFRVVCICLGNPPETFTWEYRDKDKNYEKIGPITPLEFYREHVKPLFNMEDKICLVNDPRPQHKHN 280 (453)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCCSSEEEEEECTTSCEEEEEEECHHHHHHHHTTTTSCGGGEEEEECCCCTTSCSS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcCCCCceeeEEEEccCCcccccCCCCHHHHHHHhcCCcCCCCCeEEEecCCCCcCccc
Confidence 1 3 11000 00 00 1 3344443
Q ss_pred ---------------------cCCChH-HHHHHHHHh-CCcEEEEecccccccccCCceEeCCC----------------
Q 019447 131 ---------------------VPENNE-KQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTGPC---------------- 171 (341)
Q Consensus 131 ---------------------i~~~~~-~~ik~al~~-GPV~v~i~~~~~~f~~y~~GIy~~~~---------------- 171 (341)
++.++. +.++++|++ |||++++++.. +.++++|||+..+
T Consensus 281 ~~y~v~~~~Nv~~g~~~~y~Nvp~~~l~~~~~~al~~g~PV~~~~Dv~~--~~~~k~GI~~~~~~~~~~~fg~~~~~m~K 358 (453)
T 2cb5_A 281 KLYTVEYLSNMVGGRKTLYNNQPIDFLKKMVAASIKDGEAVWFGCDVGK--HFNSKLGLSDMNLYDHELVFGVSLKNMNK 358 (453)
T ss_dssp EEEEETTCCSSTTCCCCCEEECCHHHHHHHHHHHHHTTCCEEEEECTTT--TEETTTTEECTTSBCHHHHHSCCSCSSCH
T ss_pred ceeEEeecCcccccccccccccCHHHHHHHHHHHHHcCCCEEEEEEeCh--hhccCCcEEcCccccchhhcCccccccCH
Confidence 232222 345567777 69999999974 4455999997643
Q ss_pred -------CCCCCceEEEEEee--ec-CCe-eEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeeccccccc
Q 019447 172 -------STSLDHAVLIVGYD--SE-NGV-DYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 233 (341)
Q Consensus 172 -------~~~~~HaV~IVGyg--~~-~g~-~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 233 (341)
.+..+|||+||||| .+ +|+ +|||||||||++||++|||+|+|+ .|+.+...+++
T Consensus 359 aeRl~~~~s~~~HAmlivGyg~~~d~~G~~~yWiVkNSWG~~wG~~GY~~ms~~--------wf~ey~~~vvV 423 (453)
T 2cb5_A 359 AERLTFGESLMTHAMTFTAVSEKDDQDGAFTKWRVENSWGEDHGHKGYLCMTDE--------WFSEYVYEVVV 423 (453)
T ss_dssp HHHHHTTSCCCCEEEEEEEEEECTTSCSCEEEEEEECSBCTTSTBTTEEEEEHH--------HHHHHEEEEEE
T ss_pred HHHhhccCCCCCeEEEEEEeccccccCCCccEEEEEcCcCCCcCcCceEEechh--------hHhhceEEEEe
Confidence 23569999999999 65 677 999999999999999999999997 45555544444
No 42
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=100.00 E-value=2.2e-37 Score=306.81 Aligned_cols=207 Identities=18% Similarity=0.202 Sum_probs=145.3
Q ss_pred CCCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHH-cCCCcccCH----------------HHHHhhCC
Q 019447 12 LLSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIV-TGSLVSLSE----------------QELIDCDR 74 (341)
Q Consensus 12 ~lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~-~~~~~~LSe----------------q~l~dc~~ 74 (341)
..+..++++....+|||||||.| |+|||||++++||+.++++ +++.++||| |+|+||+.
T Consensus 52 ~~~~~F~~~~~~~vtpVknQg~c----GsCWaFs~~~~lE~~~~~~~~~~~~~LSe~yl~~~dklEkan~flq~lvdc~~ 127 (457)
T 2e01_A 52 QDNRVFNTVVSTDSTPVTNQKSS----GRCWLFAATNQLRLNVLSELNLKEFELSQAYLFFYDKLEKANYFLDQIVSSAD 127 (457)
T ss_dssp HCCCCCSEECC----------------CCHHHHHHHHHHHHHHHHHTTCSSCCBCHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCceEEEecCCccCcccCCCC----ccchhHHhHHHHHHHHHHHhCCCceeeCChhhhhhhHHHHHHHHHHHHHHhcC
Confidence 46778888888899999999999 9999999999999999998 888999999 67899975
Q ss_pred C-----------CCCCCCCCcHHHHHHHHHHhCCcccCCcccC-CCC---------------------------------
Q 019447 75 S-----------YNSGCGGGLMDYAYQFVIKNHGIDTEKDYPY-RGQ--------------------------------- 109 (341)
Q Consensus 75 ~-----------~~~gC~GG~~~~a~~~l~~~~Gi~~E~~yPY-~~~--------------------------------- 109 (341)
. .+.||+||.+..|++++.+ +||++|+.||| ...
T Consensus 128 ~~~~~r~v~~l~~~~gcdGG~~~~a~~~i~k-yGivpe~~yP~~s~~s~ns~~~n~~L~~kLr~~a~~lR~~~~~~~~~~ 206 (457)
T 2e01_A 128 QDIDSRLVQYLLAAPTEDGGQYSMFLNLVKK-YGLIPKDLYGDLPYSTTASRKWNSLLTTKLREFAETLRTALKERSADD 206 (457)
T ss_dssp SCTTSHHHHHHHHCTTCSCBCHHHHHHHHHH-HCCCBGGGSCSCSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSCTTS
T ss_pred CcccchhhhhhccCCCCCCCCHHHHHHHHHH-cCccchhhcCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHhccCchh
Confidence 2 3789999999999999965 59999999999 310
Q ss_pred C---------------------Ccccc----cc----------------c--------------------------CCce
Q 019447 110 A---------------------GQCNK----QK----------------L--------------------------NRHI 122 (341)
Q Consensus 110 ~---------------------~~C~~----~~----------------~--------------------------~~~~ 122 (341)
. +.++. .. + ..+.
T Consensus 207 ~~l~~~~~~~l~~iy~il~~~LG~pP~~~~~~F~~~~~dkd~~~~~~~~TP~~F~~~~v~~~~~dyV~l~n~p~~py~~~ 286 (457)
T 2e01_A 207 SIIVTLREQMQREIFRLMSLFMDIPPVQPNEQFTWEYVDKDKKIHTIKSTPLEFASKYAKLDPSTPVSLINDPRHPYGKL 286 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCCCSSCTTSCEEEEEECTTSCEEEEEECHHHHHHHTTCCCTTSEEEEECCTTSCTTCE
T ss_pred hhHHHHHHHHHHHHHHHHHHHcCCCCCCCCceEEEEEEcCCCCccCCCcChHHHHHHHcCCCchheEEEeecCCCccCee
Confidence 0 00111 00 0 0000
Q ss_pred eeec-----------eeEecCCCh-HHHHHHHHHh-CCcEEEEecccccccccCCceEeCCC------------------
Q 019447 123 VTID-----------GYKDVPENN-EKQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTGPC------------------ 171 (341)
Q Consensus 123 ~~i~-----------~y~~i~~~~-~~~ik~al~~-GPV~v~i~~~~~~f~~y~~GIy~~~~------------------ 171 (341)
+.+. .|..++.++ ...++++|++ +||.+++++. .|++|++|||+..+
T Consensus 287 y~ve~~~N~~~g~~~~y~Nvp~d~l~~~~~~aL~~g~PV~~~~Dv~--~~~~~~~GI~~~~~~~~~~fg~~~~m~KaeRl 364 (457)
T 2e01_A 287 IKIDRLGNVLGGDAVIYLNVDNETLSKLVVKRLQNNKAVFFGSHTP--KFMDKKTGVMDIELWNYPAIGYNLPQQKASRI 364 (457)
T ss_dssp EEETTCCSSTTCCCEEEEECCHHHHHHHHHHHHHTTCCEEEEECTT--TTEETTTTEECTTSBCGGGGTCCCCCCHHHHH
T ss_pred EEEeccCCeecCCceeEEEcCHHHHHHHHHHHHHhCCCEEEEEEcC--HhHcccCceecccccchhhcCcccccCHHHhh
Confidence 1111 133444322 1455667776 6999999996 37788999997654
Q ss_pred ---CCCCCceEEEEEeeec-CCe--eEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeeccccccc
Q 019447 172 ---STSLDHAVLIVGYDSE-NGV--DYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 233 (341)
Q Consensus 172 ---~~~~~HaV~IVGyg~~-~g~--~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 233 (341)
.+..+|||+|||||.+ +|+ +|||||||||++||++|||+|+|+ .|+.+...+++
T Consensus 365 ~~~~s~~~HAmlivGyg~d~~G~~p~yW~VkNSWG~~wG~~GY~~ms~~--------wf~ey~~~ivV 424 (457)
T 2e01_A 365 RYHESLMTAAMLITGCHVDETSKLPLRYRVENSWGKDSGKDGLYVMTQK--------YFEEYCFQIVV 424 (457)
T ss_dssp HTTSCCCCEEEEEEEEEECTTTCCEEEEEEECSSCTTSTBTTEEEEEHH--------HHHHHEEEEEE
T ss_pred ccCCCCCCeEEEEEEEEeccCCCccCEEEEEeCccCCcCCCceEEeehh--------hHhhccEEEEe
Confidence 2356999999999986 787 899999999999999999999997 55555555544
No 43
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=100.00 E-value=1.5e-32 Score=266.88 Aligned_cols=184 Identities=21% Similarity=0.294 Sum_probs=134.0
Q ss_pred CCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCC-----------CCCCCCCCcHHHHHHHH
Q 019447 24 LLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRS-----------YNSGCGGGLMDYAYQFV 92 (341)
Q Consensus 24 ~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~-----------~~~gC~GG~~~~a~~~l 92 (341)
.+|||||||+| |+|||||++++||+.+++++++.++||||+|++|+.. .+.||+||.+..|++||
T Consensus 21 ~vtpVknQg~c----GsCWaFSa~~~lE~~~~~k~~~~~~LSeq~Lvdcd~~ekan~~l~~~g~~~gcdGG~~~~a~~~i 96 (383)
T 3pw3_A 21 PITSVKNQNRA----GTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGM 96 (383)
T ss_dssp CCCCCCBCCBS----SCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHHHHHHHHHHHHHTTTCSCCCSCCCHHHHHHHH
T ss_pred CCCCcccCCCC----cHHHHHHhHHHHHHHHHHHcCCCCccChHHHHhhchhhhhhhhhhhccCCCCCCCCCHHHHHHHH
Confidence 58999999999 9999999999999999999999999999999999741 25799999999999999
Q ss_pred HHhCCcccCCccc------CCCCCC--------------cc---ccc------c------------------c------C
Q 019447 93 IKNHGIDTEKDYP------YRGQAG--------------QC---NKQ------K------------------L------N 119 (341)
Q Consensus 93 ~~~~Gi~~E~~yP------Y~~~~~--------------~C---~~~------~------------------~------~ 119 (341)
.++ ||++|++|| +...+. .- +.. + + .
T Consensus 97 ~k~-Givpe~~YP~~~~~~~~s~n~~~m~~~L~~~Lr~~a~~~~r~l~~~~~~~~~~~~~i~~il~~~LG~pP~~F~~~g 175 (383)
T 3pw3_A 97 ETF-GLVPEEEMRPGMMYADTLSNHTELSALTDAMVAAIAKGKLRKLQSDENNAMLWKKAVAAVHQIYLGVPPEKFTYKG 175 (383)
T ss_dssp HHT-CCCBGGGSCTTGGGTCSSCBCHHHHHHHHHHHHHHHSSCCSSCCBCTTCCBHHHHHHHHHHHHHHCCCCSSEEETT
T ss_pred HHc-CcCcHHhCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHhhhhhhchhhHHHHHHHHHHHHHHHhCCCCceEEecC
Confidence 765 999999999 221100 00 000 0 0 0
Q ss_pred C---------ce-eeeceeEec----------------CCC---------hHHHHHH----HHHhC-CcEEEEecccccc
Q 019447 120 R---------HI-VTIDGYKDV----------------PEN---------NEKQLLQ----AVVAQ-PVSVGICGSERAF 159 (341)
Q Consensus 120 ~---------~~-~~i~~y~~i----------------~~~---------~~~~ik~----al~~G-PV~v~i~~~~~~f 159 (341)
+ .+ ...+.|..+ +.+ ..+.|++ +|.+| ||..+-++....|
T Consensus 176 k~~TP~~F~~~v~~~~~dyV~l~n~p~~py~~~y~ve~~~N~~~g~~~Nvp~d~l~~~~~~~Lk~G~~V~fg~DV~~~~f 255 (383)
T 3pw3_A 176 KEYTPKSFFESTGLKASDYVSLTSYTHHPFYTQFPLEIQDNWRHGMSYNLPLDEFMEVFDNAINTGYTIAWGSDVSESGF 255 (383)
T ss_dssp EEECHHHHHHHHTCCGGGEEEEECCSSSCTTCEEECCCTTCTTCCEEEECCHHHHHHHHHHHHHTTCCEEEEEECCSTTB
T ss_pred CCcCHHHHHHHhCCCccceEEEeeCCCCccCceEEEecCCCccCCccCCcCHHHHHHHHHHHHHcCCcEEEEcccCcccc
Confidence 0 00 011122111 000 2344444 45667 9999999975455
Q ss_pred cccCCceEeCC-----------------------------------------------CCCCCCceEEEEEeee-cCCee
Q 019447 160 QLYSSGIFTGP-----------------------------------------------CSTSLDHAVLIVGYDS-ENGVD 191 (341)
Q Consensus 160 ~~y~~GIy~~~-----------------------------------------------~~~~~~HaV~IVGyg~-~~g~~ 191 (341)
. +.||..-+ ..+..+|||+|||||. ++|++
T Consensus 256 ~--~~Gi~~~~~~~~~~~~~g~~~~~~~~~~kaer~~~~~~~~e~~~tk~~R~~~~d~~~t~~~Ha~~ivG~~~d~~g~~ 333 (383)
T 3pw3_A 256 T--RDGVAVMPDDEKVQELSGSDMAHWLKLKPEEKKLNTKPQPQKWCTQAERQLAYDNYETTDDHGMQIYGIAKDQEGNE 333 (383)
T ss_dssp C--TTSEECCBCHHHHHHHSSCCHHHHHTSCHHHHCTTTSCCCBCCCCHHHHHHHHHTTSSCCEEEEEEEEEEECTTCCE
T ss_pred C--CCceeeCcchhhHHHhcCcchhhhccCCHHHhhhccCCCcccCCCHHHHHHHhhhccCcCCeEEEEEEEEEcCCCce
Confidence 4 77877211 0123479999999997 57889
Q ss_pred EEEEEcCCCCCCCCCcEEEEEcc
Q 019447 192 YWIIKNSWGRSWGMNGYMHMQRN 214 (341)
Q Consensus 192 yWiVkNSWG~~WGe~GY~~i~r~ 214 (341)
|||||||||+.||++|||+|+++
T Consensus 334 yw~vkNSWg~~~g~~Gy~~m~~~ 356 (383)
T 3pw3_A 334 YYMVKNSWGTNSKYNGIWYASKA 356 (383)
T ss_dssp EEEEECSBCSCSTTTTEEEEEHH
T ss_pred EEEEEeCCCCCCCcCCeEEecHH
Confidence 99999999999999999999986
No 44
>2jye_A Granulin A; epithelin, human, stack of hairpins, alternative splicing, cytokine, glycoprotein, polymorphism, secreted; NMR {Homo sapiens}
Probab=99.93 E-value=8.1e-27 Score=172.40 Aligned_cols=61 Identities=39% Similarity=1.061 Sum_probs=58.0
Q ss_pred CCCCCCCcccCCCCceeeccCccCccccccccCCCCceecCCCCCcCCCCCCcccCCCCeeecCCCC
Q 019447 246 PTRCSLLTYCAAGETCCCGSSILGICLSWKCCGFSSAVCCSDHRYCCPSNYPICDSVRHQCLTRLTG 312 (341)
Q Consensus 246 ps~c~~~~~c~~~~tcc~~~~~~~~~~~~~ccp~~~a~cc~d~~hccp~~~~~c~~~~~~c~~~~~~ 312 (341)
+++||++++||+++|||++.+ ++||||||++||||+|+.||||+|| +||++.++|+++...
T Consensus 3 ~v~Cd~~~~Cp~~~TCC~~~~-----g~wgCCPl~~AvCC~D~~hCCP~gy-~Cd~~~g~C~~~~~~ 63 (72)
T 2jye_A 3 DVKCDMEVSCPDGYTCCRLQS-----GAWGCCPFTQAVCCEDHIHCCPAGF-TCDTQKGTCEQKLAA 63 (72)
T ss_dssp SCCSSTTCCCCTTCCEEECSS-----SSEEECCSSSSTTSSSSSCSSCSSC-CEETTTTEECSSSCS
T ss_pred ceeCCCCCCCCCCCcccCCCC-----CCCccCCCCCCCccCCCCccCCCCC-eeCCCCCeEeCCCCC
Confidence 568999999999999999999 8899999999999999999999999 999999999998833
No 45
>2jyv_A Granulin-2, granulin F; granulin C, epithelin, human, stack of hairpins, alternative splicing, cytokine, glycoprotein, polymorphism, secreted; NMR {Homo sapiens}
Probab=99.91 E-value=7.1e-26 Score=167.36 Aligned_cols=58 Identities=34% Similarity=0.875 Sum_probs=27.8
Q ss_pred CCC-CCCcccCCCCceeeccCccCccccccccCCCCceecCCCCCcCCCCCCcccCCCCeeecCC
Q 019447 247 TRC-SLLTYCAAGETCCCGSSILGICLSWKCCGFSSAVCCSDHRYCCPSNYPICDSVRHQCLTRL 310 (341)
Q Consensus 247 s~c-~~~~~c~~~~tcc~~~~~~~~~~~~~ccp~~~a~cc~d~~hccp~~~~~c~~~~~~c~~~~ 310 (341)
++| |++++||+++|||++.. ++||||||++||||+||.||||+|| +||+++++|++++
T Consensus 4 v~CpD~~~~Cp~~~TCC~~~~-----g~wgCCPl~~AvCC~D~~hCCP~gy-~Cd~~~g~C~~~~ 62 (72)
T 2jyv_A 4 IQCPDSQFECPDFSTCCVMVD-----GSWGCCPMPQASCCEDRVHCCPHGA-FCDLVHTRCIKLA 62 (72)
T ss_dssp BCCSSCSSCBCTTEEEEECSS-----SCEEEEECCC-----------------------------
T ss_pred eECCCCCcCCCCCCcccCCCC-----CCEeccCCCCCCcCCCCCccCCCcC-eeCCCCCEEeCCC
Confidence 489 88999999999999976 7899999999999999999999999 9999999999998
No 46
>2jyt_A Granulin-5, granulin C; epithelin, human, stack of hairpins, alternative splicing, cytokine, glycoprotein, polymorphism, secreted; NMR {Homo sapiens} PDB: 2jyu_A
Probab=99.90 E-value=1.1e-24 Score=159.43 Aligned_cols=58 Identities=40% Similarity=0.998 Sum_probs=52.4
Q ss_pred CCCCCCCcccCCCCceeeccCccCccccccccCCCCceecCCCCCcCCCCCCcccCCCCeeecCC
Q 019447 246 PTRCSLLTYCAAGETCCCGSSILGICLSWKCCGFSSAVCCSDHRYCCPSNYPICDSVRHQCLTRL 310 (341)
Q Consensus 246 ps~c~~~~~c~~~~tcc~~~~~~~~~~~~~ccp~~~a~cc~d~~hccp~~~~~c~~~~~~c~~~~ 310 (341)
+++||++++||+++|||++++ ++||||||++||||+|++||||+|| +|+ ..++|+|.+
T Consensus 2 ~v~Cd~~~~CP~~~TCC~~~~-----G~wgCCPl~~AvCC~D~~hCCP~gy-~C~-~~g~C~k~~ 59 (69)
T 2jyt_A 2 MVPCDNVSSCPSSDTCCQLTS-----GEWGCCPIPEAVCCSDHQHCCPQGY-TCV-AEGQCQKLA 59 (69)
T ss_dssp -CCSCSSCCCCSSCEEEECSS-----SCEEEECCCCCCCCSSTTCCCSTTC-EEE-TTTEEEC--
T ss_pred cccCCCccCCCCCCeecCCCC-----CCCccCcCCCCCcCCCCCccCCCCC-eeC-CCCcCcCCC
Confidence 358999999999999999999 8999999999999999999999999 995 569999987
No 47
>1fwo_A Oryzain beta chain; beta-hairpin stack fold, granulin/epithelin-like protein repeats, hydrolase; NMR {Synthetic} SCOP: g.3.16.1
Probab=99.47 E-value=1.6e-14 Score=91.79 Aligned_cols=34 Identities=26% Similarity=0.593 Sum_probs=32.6
Q ss_pred CCCCCCcccCCCCceeeccCccCccccccccCCC
Q 019447 247 TRCSLLTYCAAGETCCCGSSILGICLSWKCCGFS 280 (341)
Q Consensus 247 s~c~~~~~c~~~~tcc~~~~~~~~~~~~~ccp~~ 280 (341)
++||++++||+++||||+.+++++|++||||||+
T Consensus 2 ~~CD~~~sCP~~~TCCc~~~~~~~C~~WGCCPle 35 (35)
T 1fwo_A 2 HVCDDNFSCPAGSTCSSAFGFRNLSLVWGCSPVE 35 (35)
T ss_dssp CCSSSSCCCCSSSEECCCCCSSCSSCCCCEECCC
T ss_pred ccCCCcccCCCCCcEEeeeccCCccceEeCccCC
Confidence 5899999999999999999999999999999985
No 48
>1i8x_A Granulin-1; two beta-hairpin stack, cytokine; NMR {Synthetic} SCOP: g.3.16.1 PDB: 1qgm_A 1i8y_A
Probab=99.22 E-value=2.6e-12 Score=78.84 Aligned_cols=29 Identities=34% Similarity=0.768 Sum_probs=26.8
Q ss_pred CCCCCCcccCCCCceeeccCccCccccccccCCC
Q 019447 247 TRCSLLTYCAAGETCCCGSSILGICLSWKCCGFS 280 (341)
Q Consensus 247 s~c~~~~~c~~~~tcc~~~~~~~~~~~~~ccp~~ 280 (341)
.+||++++||+++|||++.. |+||||||+
T Consensus 2 v~CD~~~~CP~~~TCC~~~~-----G~WGCCP~~ 30 (30)
T 1i8x_A 2 IHCDAATICPDGTTCSLSPY-----GVWYCSPFS 30 (30)
T ss_dssp CCTTTTCCCCTTEEEEECTT-----SCEEEEECC
T ss_pred ccCCCCccCCCCCeeeccCC-----CCEecCcCC
Confidence 47999999999999999888 899999986
No 49
>1g26_A Granulin A, HGA; granulin/epithelin protein repeats, beta-hairpin stack, cytokine; NMR {Synthetic} SCOP: g.3.16.1
Probab=99.22 E-value=1e-12 Score=81.65 Aligned_cols=30 Identities=37% Similarity=0.985 Sum_probs=27.9
Q ss_pred CCCCCCcccCCCCceeeccCccCccccccccCCCC
Q 019447 247 TRCSLLTYCAAGETCCCGSSILGICLSWKCCGFSS 281 (341)
Q Consensus 247 s~c~~~~~c~~~~tcc~~~~~~~~~~~~~ccp~~~ 281 (341)
.+||++++||+++|||++.. ++||||||++
T Consensus 2 v~Cd~~~~Cp~~~TCC~~~~-----g~wgCCP~~~ 31 (31)
T 1g26_A 2 VHCDMEVICPDGYTCCRLPS-----GAWGCCPFTQ 31 (31)
T ss_dssp EEEETTEEECTTEEEEECTT-----SCEEEEECCC
T ss_pred eeCCCCCccCCCCeecCCCC-----CCeEcCCCCC
Confidence 47999999999999999997 8999999985
No 50
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=97.20 E-value=0.0044 Score=53.30 Aligned_cols=129 Identities=18% Similarity=0.208 Sum_probs=87.2
Q ss_pred cCCCCcCCCCCchHHHHHHHHHHHHHH--------HHcCCCcccCHHHHHhhCCCCCCCCCCCcHHHHHHHHHHhCCccc
Q 019447 29 RNKSSCLYLLGACWAFSATGAIEGINK--------IVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNHGIDT 100 (341)
Q Consensus 29 kdQg~c~~~~GsCWAfA~~~alE~~~~--------i~~~~~~~LSeq~l~dc~~~~~~gC~GG~~~~a~~~l~~~~Gi~~ 100 (341)
..||.- +-|-+|+.++.|-+... +.+.-...+|+++|.+ .|..+...++|.. ..|...
T Consensus 25 ETQg~~----~WCa~Y~~aAilN~~~nt~~~nA~~iMr~~yPN~s~~~l~~---------t~~~~~q~Iky~~-s~G~~~ 90 (183)
T 1pxv_A 25 EQQFDN----SWAAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPN---------CATFPNQMIEYGK-SQGRDI 90 (183)
T ss_dssp CCCCSS----SCHHHHHHHHHHHHHHTCSCCCHHHHHHHHSTTSCTTTGGG---------CCBCHHHHHHHHH-HTTCCC
T ss_pred eccCcC----chHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhh---------cCCCHHHHHHHHH-HcCcCh
Confidence 579998 99999999998876541 1112235677777766 4567889999986 435321
Q ss_pred CCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHh-CCcEEEEecccccccccCCceEeCCCCCCCCceE
Q 019447 101 EKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTGPCSTSLDHAV 179 (341)
Q Consensus 101 E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~-GPV~v~i~~~~~~f~~y~~GIy~~~~~~~~~HaV 179 (341)
...+ +.+ +.+++++.+.+ .||.+...-.. ........+||+
T Consensus 91 ---------------~~~n----------r~l--s~neV~~~i~~Nk~I~v~~~~v~-----------e~~~~~~~gHA~ 132 (183)
T 1pxv_A 91 ---------------HYQE----------GVP--SYNQVDQLTKDNVGIMILAQSVS-----------QNPNDPHLGHAL 132 (183)
T ss_dssp ---------------EEEE----------SCC--CHHHHHHHHHTTCCEEEEEECCC-----------SSTTSCCCEEEE
T ss_pred ---------------hHhc----------CCC--CHHHHHHHHhcCCcEEEEccccc-----------cCCCCccCceeE
Confidence 0000 111 25678888886 59988775431 122334678999
Q ss_pred EEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEcc
Q 019447 180 LIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRN 214 (341)
Q Consensus 180 ~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r~ 214 (341)
+||||-..++.++.+|-|=|-. |++-++-+
T Consensus 133 av~Gya~~~~~~~y~~WNPW~~-----~~~~~~a~ 162 (183)
T 1pxv_A 133 AVVGNAKINDQEKLIYWNPWDT-----ELSIQDAD 162 (183)
T ss_dssp EEEEEEEETTEEEEEEECTTCS-----SCEEEETT
T ss_pred EEEeeeecCCCeEEEEeCCccC-----CcEeecCC
Confidence 9999999888999999998843 77777644
No 51
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4
Probab=97.04 E-value=0.0088 Score=56.58 Aligned_cols=128 Identities=19% Similarity=0.228 Sum_probs=85.0
Q ss_pred cCCCCcCCCCCchHHHHHHHHHHHHHH--------HHcCCCcccCHHHHHhhCCCCCCCCCCCcHHHHHHHHHHhCCccc
Q 019447 29 RNKSSCLYLLGACWAFSATGAIEGINK--------IVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNHGIDT 100 (341)
Q Consensus 29 kdQg~c~~~~GsCWAfA~~~alE~~~~--------i~~~~~~~LSeq~l~dc~~~~~~gC~GG~~~~a~~~l~~~~Gi~~ 100 (341)
.-||.- +-|-+||.++.|-+... +.+.-...+|+++|.+ .|..+...++|+. .+|...
T Consensus 201 ETQg~~----pWCa~Ya~aailN~~~~t~~~nA~~iMr~~yPN~S~~~l~~---------ts~~~~q~Iky~q-syG~~~ 266 (367)
T 1x9y_A 201 EQQFDN----SWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPN---------CATFPNQMIEYGK-SQGRDI 266 (367)
T ss_dssp CCCSSS----SCHHHHHHHHHHHHHTTCSCCCHHHHHHHHCTTSCTTTGGG---------CCCCHHHHHHHHH-HTTEEE
T ss_pred eccCCC----chHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhh---------cCCCHHHHHHHHH-HhCcch
Confidence 578988 99999999998876431 1112235677777766 4567889999986 446421
Q ss_pred CCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHh-CCcEEEEecccccccccCCceEeCCCCCCCCceE
Q 019447 101 EKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTGPCSTSLDHAV 179 (341)
Q Consensus 101 E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~-GPV~v~i~~~~~~f~~y~~GIy~~~~~~~~~HaV 179 (341)
+-....+ ..+++++.+.+ .||.|........ ..+...+|||
T Consensus 267 -------------------------~~~n~~l--s~deVk~~id~Nk~I~v~~~~v~~~-----------~n~~~~gHAl 308 (367)
T 1x9y_A 267 -------------------------HYQEGVP--SYNQVDQLTKDNVGIMILAQSVSQN-----------PNDPHLGHAL 308 (367)
T ss_dssp -------------------------EEEESCC--CHHHHHHHHHTTCCEEEEEEETTSC-----------SSSCCCSEEE
T ss_pred -------------------------hhhcCCC--CHHHHHHHHhcCCcEEEEccccccC-----------CCCccCceeE
Confidence 1111122 24667788876 5998887754211 1233568999
Q ss_pred EEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEc
Q 019447 180 LIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQR 213 (341)
Q Consensus 180 ~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r 213 (341)
+||||...++.+|.++-|=|-. +++-++-
T Consensus 309 avvGyA~~~~~~~y~~WNPW~~-----~~~~~sa 337 (367)
T 1x9y_A 309 AVVGNAKINDQEKLIYWNPWDT-----ELSIQDA 337 (367)
T ss_dssp EEEEEEEETTEEEEEEECTTCS-----SCEEEET
T ss_pred EEEeccccCCCcEEEEecCccC-----CceeecC
Confidence 9999988778999999998843 3666554
No 52
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=96.99 E-value=0.016 Score=49.72 Aligned_cols=119 Identities=18% Similarity=0.195 Sum_probs=80.7
Q ss_pred cCCCCcCCCCCchHHHHHHHHHHHHHH--------HHcCCCcccCHHHHHhhCCCCCCCCCCCcHHHHHHHHHHhCCccc
Q 019447 29 RNKSSCLYLLGACWAFSATGAIEGINK--------IVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNHGIDT 100 (341)
Q Consensus 29 kdQg~c~~~~GsCWAfA~~~alE~~~~--------i~~~~~~~LSeq~l~dc~~~~~~gC~GG~~~~a~~~l~~~~Gi~~ 100 (341)
..||.- +-|-+|+.++.|-+... +.+.-...+|+++|... |..+.+.++|+.+. |-.
T Consensus 16 ETQg~~----pWCa~Ya~aailN~~~~~~~~~A~~imr~~yPn~S~~~l~~~---------~~t~~e~iky~~s~-g~~- 80 (174)
T 1cv8_A 16 ETQGNN----GWCAGYTMSALLNATYNTNKYHAEAVMRFLHPNLQGQQFQFT---------GLTPREMIYFGQTQ-GRS- 80 (174)
T ss_dssp CCCCSS----SCHHHHHHHHHHHHHHTCCCCCHHHHHHHHCSSCCHHHHHHC---------CCCHHHHHHHHHHT-TCC-
T ss_pred eccCCC----chHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCCHHHHhhc---------CCCHHHHHHHHHHc-CCC-
Confidence 578988 99999999998876541 22223468999999843 34678899998554 321
Q ss_pred CCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHhC-CcEEEEecccccccccCCceEeCCCCCCCCceE
Q 019447 101 EKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQ-PVSVGICGSERAFQLYSSGIFTGPCSTSLDHAV 179 (341)
Q Consensus 101 E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~G-PV~v~i~~~~~~f~~y~~GIy~~~~~~~~~HaV 179 (341)
....++ .+ +.+++++++.++ ||.|..+.. + . ..+...+|||
T Consensus 81 --------------~~~~n~----------~l--s~~eV~~~~~~nk~i~i~~~~v-e----~-------~~~~~~gHAl 122 (174)
T 1cv8_A 81 --------------PQLLNR----------MT--TYNEVDNLTKNNKGIAILGSRV-E----S-------RNGMHAGHAM 122 (174)
T ss_dssp --------------CEEESS----------CC--CHHHHHHHHHTTCCEEEEEEES-S----C-------BTTBCCEEEE
T ss_pred --------------hhhhcC----------CC--CHHHHHHHHhcCCceEEEcccc-c----C-------CCCCCCceeE
Confidence 011011 11 256788989874 888777643 1 1 1123568999
Q ss_pred EEEEeeec-CCeeEEEEEcCCC
Q 019447 180 LIVGYDSE-NGVDYWIIKNSWG 200 (341)
Q Consensus 180 ~IVGyg~~-~g~~yWiVkNSWG 200 (341)
+||||-.. +|.+|.++-|=|-
T Consensus 123 av~Gy~~~~ng~~~y~~WNPW~ 144 (174)
T 1cv8_A 123 AVVGNAKLNNGQEVIIIWNPWD 144 (174)
T ss_dssp EEEEEEEETTSCEEEEEECTTC
T ss_pred EEEeeeeecCCceEEEEeCCcc
Confidence 99999984 7789999999884
No 53
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}
Probab=91.25 E-value=0.49 Score=42.63 Aligned_cols=64 Identities=25% Similarity=0.406 Sum_probs=38.7
Q ss_pred EecCCChHHHHHHHHHhC-CcEEEEecccc-----ccccc--CCceEeCCCCCCCCceEEEEEeeecCCeeEEEEEcCC
Q 019447 129 KDVPENNEKQLLQAVVAQ-PVSVGICGSER-----AFQLY--SSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSW 199 (341)
Q Consensus 129 ~~i~~~~~~~ik~al~~G-PV~v~i~~~~~-----~f~~y--~~GIy~~~~~~~~~HaV~IVGyg~~~g~~yWiVkNSW 199 (341)
..+...+.++|++.|.+| ||+|.+....+ .|+.+ .+|-+. -...+|+|+|+||++. ..+|.+.+
T Consensus 125 ~dltG~sl~~L~~~I~~G~PVIv~~t~~~~p~~~~~~~~W~~~~G~~~---~~~~~H~VVl~GYd~~----~vyi~DP~ 196 (236)
T 3erv_A 125 VDLTGKSIEELYKSVKAGQPVVIITNATFAPLDEDEFTTWETNNGDVS---ITYNEHCVVLIGYDQE----SVYIRDPL 196 (236)
T ss_dssp EECTTSCHHHHHHHHHTTCCEEEEEETTSSCCCGGGCEEEEETTEEEE---ECTTEEEEEEEEECSS----EEEEECTT
T ss_pred eecCCCCHHHHHHHHHCCCeEEEEEeCCcccccccccceeecCCCcee---eccCCeEEEEEEEeCC----EEEEECCC
Confidence 345556788999999997 99987764311 12111 122211 1235799999999973 34455544
No 54
>1ziv_A Calpain 9; cysteine protease, papain, calcium-dependent, thiol protease, structural genomics consortium, SGC, hydrolase; 2.31A {Homo sapiens} SCOP: d.3.1.3 PDB: 2p0r_A*
Probab=69.37 E-value=68 Score=29.91 Aligned_cols=107 Identities=21% Similarity=0.266 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHcCCCcccCHHHHHhhCCCCCCCCCCCcHHHHHHHHHHhCCcccCCcccCCCCCCcccccccCCceeeec
Q 019447 47 TGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTID 126 (341)
Q Consensus 47 ~~alE~~~~i~~~~~~~LSeq~l~dc~~~~~~gC~GG~~~~a~~~l~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~ 126 (341)
.+.||-++++..|.--. =.||.+.+||..|. +|++ |. ++...
T Consensus 162 ~~LLEKAyAKl~GsY~~----------------l~gG~~~eal~dLT--G~~~-~~-~~l~~------------------ 203 (339)
T 1ziv_A 162 SALLEKAYAKLNGSYEA----------------LKGGSAIEAMEDFT--GGVA-ET-FQTKE------------------ 203 (339)
T ss_dssp HHHHHHHHHHHHTSSGG----------------GTTCCHHHHHHHHH--SCCC-EE-EEGGG------------------
T ss_pred HHHHHHHHHHHcCCccc----------------ccCCCHHHHHHHhh--CCce-EE-EECCC------------------
Confidence 46788777776553111 24789999999883 4543 22 11110
Q ss_pred eeEecCCChHHHHHHHHHhCCcE-EEEecccc-cccccCCceEeCCCCCCCCceEEEEEeeec----CCeeEEEEEcCCC
Q 019447 127 GYKDVPENNEKQLLQAVVAQPVS-VGICGSER-AFQLYSSGIFTGPCSTSLDHAVLIVGYDSE----NGVDYWIIKNSWG 200 (341)
Q Consensus 127 ~y~~i~~~~~~~ik~al~~GPV~-v~i~~~~~-~f~~y~~GIy~~~~~~~~~HaV~IVGyg~~----~g~~yWiVkNSWG 200 (341)
.+..-.+.|++++..|-+. .++..... .... ....+-..+||-.|++.... ++...-.+||-||
T Consensus 204 ----~~~~l~~~l~~~~~~g~l~~~~~~~t~~~~~e~------~~~~GLv~~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg 273 (339)
T 1ziv_A 204 ----APENFYEILEKALKRGSLLGCFIDTRSAAESEA------RTPFGLIKGHAYSVTGIDQVSFRGQRIELIRIRNPWG 273 (339)
T ss_dssp ----CCTTHHHHHHHHHHHTCEEEEECCCSSGGGTTC------BCTTSCBTTCCEEEEEEEEEEETTEEEEEEEEECCSS
T ss_pred ----CcHHHHHHHHHHHhCCCeEEEEeccCCccchhh------hhccCcccCeeEEEeEEEEEecCCCceEEEEecCCCC
Confidence 0223356788888888543 33322110 0000 01112234899999998753 3467889999999
Q ss_pred C
Q 019447 201 R 201 (341)
Q Consensus 201 ~ 201 (341)
.
T Consensus 274 ~ 274 (339)
T 1ziv_A 274 Q 274 (339)
T ss_dssp C
T ss_pred C
Confidence 6
No 55
>3bb7_A Interpain A; cysteine protease, zymogen activation, bacterial odontopatho hydrolase; 1.50A {Prevotella intermedia} PDB: 3bba_A
Probab=56.26 E-value=18 Score=33.81 Aligned_cols=59 Identities=17% Similarity=0.394 Sum_probs=38.0
Q ss_pred HHHHHHHHhC-CcEEEEecccccccccCCceEeCCCCCCCCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEc
Q 019447 137 KQLLQAVVAQ-PVSVGICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQR 213 (341)
Q Consensus 137 ~~ik~al~~G-PV~v~i~~~~~~f~~y~~GIy~~~~~~~~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r 213 (341)
+.|++.|.++ ||.+.-.. ..+ . +...+||.+|=||..+ +||-|==.||-. .+|||.+.-
T Consensus 239 ~~i~~eL~~~rPV~~~G~~--~~~------~-----~~~~GHafV~DGY~~~---~~~H~NwGWgG~--~nGyy~l~~ 298 (321)
T 3bb7_A 239 DIVFSELTKGHPLIYGGVS--PGS------M-----GQDAGHAFVIDGYNKA---GLVSVNWGWNGD--VDGYYKIDL 298 (321)
T ss_dssp HHHHHHHHTTCCEEEEEC--------------------CCCEEEEEEEECTT---SCEEEECSSTTT--TCEEECCTT
T ss_pred HHHHHHHHhCCCEEEEEec--CCC------C-----CCCCceEEEEccccCC---CeEEEecCCCCC--CCceEeccC
Confidence 4667777775 98765422 111 1 1357899999999875 678776666632 399999864
No 56
>4d8b_A Streptopain; papain fold, cysteine protease, secreted, hydrolase; 1.06A {Streptococcus pyogenes} PDB: 4d8e_A* 4d8i_A* 2uzj_A* 2jtc_A
Probab=49.69 E-value=21 Score=32.41 Aligned_cols=54 Identities=22% Similarity=0.454 Sum_probs=37.9
Q ss_pred HHHHHHHHhC-CcEEEEecccccccccCCceEeCCCCCCCCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEc
Q 019447 137 KQLLQAVVAQ-PVSVGICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQR 213 (341)
Q Consensus 137 ~~ik~al~~G-PV~v~i~~~~~~f~~y~~GIy~~~~~~~~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r 213 (341)
+.|++.|.++ ||.+.-.. +.++||.+|=||+.+ +|+-|-=.||- -.+|||.+.-
T Consensus 172 ~~I~~eL~~grPV~~~G~~------------------~~gGHAwViDGY~~~---~~~H~NwGWgG--~~nGYy~l~~ 226 (261)
T 4d8b_A 172 AQIDKELSQNQPVYYQGVG------------------KVGGHAFVIDGADGR---NFYHVNWGWGG--VSDGFFRLDA 226 (261)
T ss_dssp HHHHHHHHTTCCEEEEEEE------------------TTEEEEEEEEEEESS---SCEEEECSSTT--TTCEEECTTC
T ss_pred HHHHHHHHcCCCEEEEeec------------------CCCceEEEEcccccC---CEEEEEcCCCC--CCCceeeccc
Confidence 5677778775 99876521 146899999999864 56776555552 1599999864
No 57
>1dki_A Pyrogenic exotoxin B zymogen; cysteine protease, papain-like; 1.60A {Streptococcus pyogenes} SCOP: d.3.1.1 PDB: 1pvj_A*
Probab=48.71 E-value=28 Score=33.07 Aligned_cols=54 Identities=22% Similarity=0.468 Sum_probs=37.8
Q ss_pred HHHHHHHHhC-CcEEEEecccccccccCCceEeCCCCCCCCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEc
Q 019447 137 KQLLQAVVAQ-PVSVGICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQR 213 (341)
Q Consensus 137 ~~ik~al~~G-PV~v~i~~~~~~f~~y~~GIy~~~~~~~~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r 213 (341)
+.|++.|.++ ||.+.-... .++||.+|=||+.+ +||-|==.||-. .+|||.+.-
T Consensus 290 ~~i~~eL~~~rPV~~~G~~~------------------~gGHAfV~DGy~~~---~~~H~NwGWgG~--~nGyy~l~~ 344 (371)
T 1dki_A 290 AQIDKELSQNQPVYYQGVGK------------------VGGHAFVIDGADGR---NFYHVNWGWGGV--SDGFFRLDA 344 (371)
T ss_dssp HHHHHHHHTTCCEEEEEEET------------------TEEEEEEEEEECSS---SEEEEECSSTTT--TCEEEESCC
T ss_pred HHHHHHHHcCCCEEEEeecC------------------CCceEEEECcccCC---CeEEEEeCcCCC--CCcceeccC
Confidence 4667777775 987643210 16899999999864 678776666643 599999864
No 58
>1omc_A Omega-conotoxin GVIA; presynaptic neurotoxin; HET: HYP; NMR {Conus geographus} SCOP: g.3.6.1 PDB: 1ttl_A* 2cco_A* 1tr6_A*
Probab=47.26 E-value=9.6 Score=22.28 Aligned_cols=20 Identities=30% Similarity=0.916 Sum_probs=15.0
Q ss_pred cCCCCCcCCCCCCcccCCCCeee
Q 019447 285 CSDHRYCCPSNYPICDSVRHQCL 307 (341)
Q Consensus 285 c~d~~hccp~~~~~c~~~~~~c~ 307 (341)
|.-+.||| .+ .|+....+|+
T Consensus 8 C~~~~~CC-s~--~C~~~~~~C~ 27 (28)
T 1omc_A 8 CSPTSYNC-CR--SCNPYTKRCY 27 (28)
T ss_dssp CCTTTTCB-SS--CEETTTTEEC
T ss_pred cCCCccHH-HH--HHcchhCEeC
Confidence 45567999 45 5999998884
No 59
>2r9f_A Calpain-1 catalytic subunit; protease, peptidase, inhibitor, alpha-ketoamide, hydrolase, thiol protease; HET: K2Z; 1.60A {Rattus norvegicus} SCOP: d.3.1.3 PDB: 1tlo_A* 2g8e_A* 1tl9_A* 2nqg_A* 2nqi_A* 2r9c_A* 2g8j_A* 1kxr_A 2ary_A 1zcm_A* 1mdw_A
Probab=39.72 E-value=79 Score=29.43 Aligned_cols=62 Identities=16% Similarity=0.150 Sum_probs=35.1
Q ss_pred hHHHHHHHHHhCCc-EEEEecccccccccCCceEeCCCCCCCCceEEEEEeeec--C--CeeEEEEEcCCCC
Q 019447 135 NEKQLLQAVVAQPV-SVGICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGYDSE--N--GVDYWIIKNSWGR 201 (341)
Q Consensus 135 ~~~~ik~al~~GPV-~v~i~~~~~~f~~y~~GIy~~~~~~~~~HaV~IVGyg~~--~--g~~yWiVkNSWG~ 201 (341)
-.+.|++++..|-+ +.++...... . ... ....+-..+||-.|++..+. . +...-.+||-||.
T Consensus 209 l~~~l~~~~~~g~l~~~s~~~t~~~-~---~~~-~~~~GLv~~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~ 275 (339)
T 2r9f_A 209 LYQIILKALERGSLLGCSINISDIR-D---LEA-ITFKNLVRGHAYSVTDAKQVTYQGQRVNLIRMRNPWGE 275 (339)
T ss_dssp HHHHHHHHHHHTCEEEEECCCSSSS-T---TCS-BCTTSCBTTCCEEEEEEEEEEETTEEEEEEEEECTTSC
T ss_pred HHHHHHHHHHCCCeEEEEecCCCcc-c---hhh-hhccCCcCCceEEEeEEEEEecCCCceEEEEEeCCCCC
Confidence 35677788888754 3333221100 0 000 01112224899999998753 2 3578899999995
No 60
>1q2j_A MU-conotoxin SMIIIA; HET: PCA; NMR {Synthetic} SCOP: j.30.1.1 PDB: 2yen_A*
Probab=33.41 E-value=20 Score=20.46 Aligned_cols=20 Identities=35% Similarity=1.044 Sum_probs=11.0
Q ss_pred cccCCCCc---eecCCCCCcCCC
Q 019447 275 KCCGFSSA---VCCSDHRYCCPS 294 (341)
Q Consensus 275 ~ccp~~~a---~cc~d~~hccp~ 294 (341)
+||.-|++ -=|.||..||-.
T Consensus 2 ~CC~~pngCs~rWCrdharCc~~ 24 (26)
T 1q2j_A 2 RCCNGRRGCSSRWCRDHSRCCXX 24 (26)
T ss_dssp CSCSSSSCCCSSSSSSSSSCC--
T ss_pred CccCCCCcccchhhcccceeccc
Confidence 35554443 237788888853
No 61
>1p1p_A AA-conotoxin PIVA; neurotoxin, acetylcholine receptor binding, transcription regulation; HET: HYP; NMR {Conus purpurascens} SCOP: j.30.1.3
Probab=29.21 E-value=17 Score=20.52 Aligned_cols=10 Identities=50% Similarity=1.627 Sum_probs=7.8
Q ss_pred cccC-CCCcee
Q 019447 275 KCCG-FSSAVC 284 (341)
Q Consensus 275 ~ccp-~~~a~c 284 (341)
|||. +|||.|
T Consensus 1 gccg~ypnaac 11 (26)
T 1p1p_A 1 GCCGSYPNAAC 11 (26)
T ss_dssp CCSTTSCCSSC
T ss_pred CccccCCCccc
Confidence 5665 899988
No 62
>1qk7_A Selenocosmia huwena lectin-I; SHL-I, cystine knot; NMR {Selenocosmia huwena} SCOP: g.3.6.2
Probab=23.62 E-value=37 Score=20.55 Aligned_cols=21 Identities=24% Similarity=0.793 Sum_probs=13.7
Q ss_pred CCCCCcCCCCCCcccCCCCeeec
Q 019447 286 SDHRYCCPSNYPICDSVRHQCLT 308 (341)
Q Consensus 286 ~d~~hccp~~~~~c~~~~~~c~~ 308 (341)
..+..||| +| +|.....-|.-
T Consensus 8 ~~~~~CC~-~~-~Cs~~~kWC~~ 28 (32)
T 1qk7_A 8 DYNNGCCS-GY-VCSRTWKWCVL 28 (32)
T ss_dssp SSSCCCCT-TE-EECSSSCBEEE
T ss_pred CCCCCcCC-Cc-eeCCCCCeeee
Confidence 44666774 55 78877777753
No 63
>2e4u_A Metabotropic glutamate receptor 3; G-protein-coupled receptor, neuron, central nerve system, SI protein; HET: NAG GLU; 2.35A {Rattus norvegicus} PDB: 2e4v_A* 2e4w_A* 2e4x_A* 2e4y_A*
Probab=21.52 E-value=44 Score=32.82 Aligned_cols=53 Identities=25% Similarity=0.523 Sum_probs=35.3
Q ss_pred CCCCCCCCCcccCCCC--------ceeeccCccCccccccccCCCCceecCCCCCc--CCCCCCcccCCCCeeecCC
Q 019447 244 PGPTRCSLLTYCAAGE--------TCCCGSSILGICLSWKCCGFSSAVCCSDHRYC--CPSNYPICDSVRHQCLTRL 310 (341)
Q Consensus 244 ~~ps~c~~~~~c~~~~--------tcc~~~~~~~~~~~~~ccp~~~a~cc~d~~hc--cp~~~~~c~~~~~~c~~~~ 310 (341)
.|.++|. .+|+.|. .|| |.|=|=++..==.|..+| ||.++ -=|..+.+|+...
T Consensus 480 ~P~S~CS--~~C~pG~rk~~~~g~~CC-----------~~C~~C~~~~~~td~~~C~~Cp~~~-wpn~~~~~C~~k~ 542 (555)
T 2e4u_A 480 VPTSQCS--DPCAPNEMKNMQPGDVCC-----------WICIPCEPYEYLVDEFTCMDCGPGQ-WPTADLSGCYNLP 542 (555)
T ss_dssp CCCCCSS--CCCCTTTEEEECCSSSSC-----------CEEEECCTTEEEEETTEEEECCTTE-EECTTSSSEEECC
T ss_pred CcceeeC--CCCCCCeeeeecCCCeeE-----------EECccCCCceecCCCccceeCCccc-CcCCCcCcccCCC
Confidence 3456887 5687653 666 444232221111688999 99996 8899999999887
No 64
>1pqr_A Alpha-A-conotoxin EIVA; alpha-helix, two disulfide bonds, C-TERM amidation; HET: HYP; NMR {Synthetic} SCOP: j.30.1.3
Probab=20.81 E-value=28 Score=20.31 Aligned_cols=10 Identities=40% Similarity=1.354 Sum_probs=7.7
Q ss_pred ccc-CCCCcee
Q 019447 275 KCC-GFSSAVC 284 (341)
Q Consensus 275 ~cc-p~~~a~c 284 (341)
||| |+|||.|
T Consensus 1 gccg~ypnaac 11 (31)
T 1pqr_A 1 GCCGPYPNAAC 11 (31)
T ss_dssp CCCCSSSSSSC
T ss_pred CCcCCCCCccc
Confidence 455 5999998
No 65
>2h7z_B Irditoxin subunit B; three-finger toxin, neurotoxin, snake venom; 1.50A {Boiga irregularis} SCOP: g.7.1.1
Probab=20.75 E-value=51 Score=23.82 Aligned_cols=49 Identities=16% Similarity=0.398 Sum_probs=30.3
Q ss_pred CCCCCcccCCCCceeeccCccC----cc-ccccc---cCCCCceecCCCCCcCCCCCCcccC
Q 019447 248 RCSLLTYCAAGETCCCGSSILG----IC-LSWKC---CGFSSAVCCSDHRYCCPSNYPICDS 301 (341)
Q Consensus 248 ~c~~~~~c~~~~tcc~~~~~~~----~~-~~~~c---cp~~~a~cc~d~~hccp~~~~~c~~ 301 (341)
.|.....||+|++=|-...+.. .= ...|| ||-.+. ....+||-.+. ||.
T Consensus 20 ~c~~~~tCp~g~~~Cyk~~~~~~~~g~~~i~rGCa~tCp~~~~---~~~v~CC~TD~--CN~ 76 (77)
T 2h7z_B 20 NCFKDNRCPPYHRTCYTLYRPDGNGEMKWAVKGCAKTCPTAQP---GESVQCCNTPK--CND 76 (77)
T ss_dssp SCSSCEECCTTCCEEEEEEEECSSSCEEEEEEEEESSCCCCCT---TCEEEEECSTT--TTC
T ss_pred CCccCcCcCCCcCEEeEEEEecCCCCceeEeCCcCCcCcCCCC---CceeEecCCCC--CCC
Confidence 3445667999988673332222 22 34699 997754 24578888884 773
No 66
>1mr6_A Neurotoxin; venom; NMR {Bungarus multicinctus} SCOP: g.7.1.1
Probab=20.66 E-value=1.3e+02 Score=20.82 Aligned_cols=47 Identities=23% Similarity=0.618 Sum_probs=29.2
Q ss_pred CCCCcccCCCCceeeccCccC-------ccccccc---cCCCCceecCCCCCcCCCCCCccc
Q 019447 249 CSLLTYCAAGETCCCGSSILG-------ICLSWKC---CGFSSAVCCSDHRYCCPSNYPICD 300 (341)
Q Consensus 249 c~~~~~c~~~~tcc~~~~~~~-------~~~~~~c---cp~~~a~cc~d~~hccp~~~~~c~ 300 (341)
|.....||++++=|-...+.. .=-..|| ||-.+. ....+||-.+. ||
T Consensus 11 ~~~~~tCp~g~~~C~~~~~~~~~g~~~~~~i~rGCa~tCp~~~~---~~~v~CC~TD~--CN 67 (68)
T 1mr6_A 11 CPNSETCPDGKNICVKRSWTAVRGDGPKREIRRECAATCPPSKL---GLTVFCCTTDN--CN 67 (68)
T ss_dssp CCSCCBCCTTCCCEEEECCBCCSSSCCSBCCEEEECSSSSSCCS---SSCCCCBSSSS--CC
T ss_pred CccccEeCCCCCEEEEEEEecccCccccceEeCCccCcCcCCCC---CceeEecCCCC--CC
Confidence 444567998887663322211 2246799 986654 34778998884 76
No 67
>2nqa_A Calpain 8; calpain, calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC; HET: AR7; 2.20A {Homo sapiens}
Probab=20.53 E-value=1e+02 Score=28.43 Aligned_cols=39 Identities=23% Similarity=0.521 Sum_probs=0.0
Q ss_pred CceEEEEEeeec----CCeeEEEEEcCCCCC-----CCCC---------------------cEEEEEcc
Q 019447 176 DHAVLIVGYDSE----NGVDYWIIKNSWGRS-----WGMN---------------------GYMHMQRN 214 (341)
Q Consensus 176 ~HaV~IVGyg~~----~g~~yWiVkNSWG~~-----WGe~---------------------GY~~i~r~ 214 (341)
+||-.|++.... .+...-.+||-||.. |.++ |-|||+.+
T Consensus 241 ~HaYsVl~v~~v~~~~~~~~lv~lrNPWg~~eW~G~wsd~s~~W~~~~~~~~~~l~~~~~dG~FWMs~~ 309 (326)
T 2nqa_A 241 SHAYSVTGVEEVNFQGHPEKLIRLRNPWGEVEWSGAWSDDAPEWNHIDPRRKEELDKKVEDGEFWMSLS 309 (326)
T ss_dssp SCCEEEEEEEEEEETTEEEEEEEEECTTCC-CCCSTTSTTCGGGGGSCHHHHHHHCCCCCSSEEEEEHH
T ss_pred CceEEEEEEEEEecCCCceEEEEecCCCcCccccCCCCCCCccccccCHHHHHHhCCCCCCCEEEEEHH
No 68
>2lr5_A Micasin; antimicrobial protein; NMR {Arthroderma otae}
Probab=25.34 E-value=22 Score=22.51 Aligned_cols=17 Identities=29% Similarity=0.815 Sum_probs=13.7
Q ss_pred ccccCCCCceecCCCCCcCCC
Q 019447 274 WKCCGFSSAVCCSDHRYCCPS 294 (341)
Q Consensus 274 ~~ccp~~~a~cc~d~~hccp~ 294 (341)
||| |..+..| +.||=-.
T Consensus 2 fgC-P~~~~~C---~~HC~si 18 (38)
T 2lr5_A 2 FGC-PFNENEC---HAHCLSI 18 (38)
Confidence 666 9999999 9999633
Done!