BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019448
(341 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1BX4|A Chain A, Structure Of Human Adenosine Kinase At 1.50 Angstroms
pdb|2I6A|A Chain A, Human Adenosine Kinase In Complex With 5'-Deoxy-5-
Iodotubercidin
pdb|2I6A|B Chain B, Human Adenosine Kinase In Complex With 5'-Deoxy-5-
Iodotubercidin
pdb|2I6A|C Chain C, Human Adenosine Kinase In Complex With 5'-Deoxy-5-
Iodotubercidin
pdb|2I6A|D Chain D, Human Adenosine Kinase In Complex With 5'-Deoxy-5-
Iodotubercidin
pdb|2I6B|A Chain A, Human Adenosine Kinase In Complex With An Acetylinic
Inhibitor
pdb|2I6B|B Chain B, Human Adenosine Kinase In Complex With An Acetylinic
Inhibitor
Length = 345
Score = 427 bits (1099), Expect = e-120, Method: Compositional matrix adjust.
Identities = 197/341 (57%), Positives = 261/341 (76%), Gaps = 2/341 (0%)
Query: 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGG 62
+E IL GMGNPLLDIS+VVD DFL+KY +K N+ ILAE+KH L+DE+ K+ VEY AGG
Sbjct: 5 RENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGG 64
Query: 63 ATQNSIRVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCA 121
+TQNSI+VAQWM+Q P A ++ GCIG DKFGE +K+ + A V+ HYYE TGTCA
Sbjct: 65 STQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCA 124
Query: 122 VCVVGGERSLVANLSAANCYKSE-HLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAE 180
C+ G RSL+ANL+AANCYK E HL +NW LVEKA+ YIAGFFLTVSP+S+ VA
Sbjct: 125 ACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVLKVAH 184
Query: 181 HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 240
HA+ NN++F +NLSAPFI +F+K++L KV+PY+D +FGNETEA TF++ QG+ET D++EI
Sbjct: 185 HASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEI 244
Query: 241 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG 300
A K PK + R+R + TQG D ++A + ++ F V+ + +++DTNGAGDAFVG
Sbjct: 245 AKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVG 304
Query: 301 GFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
GFLSQLV +KP+ EC+RAG Y + +II+R+GCT+PEKP+F+
Sbjct: 305 GFLSQLVSDKPLTECIRAGHYAASIIIRRTGCTFPEKPDFH 345
>pdb|3LOO|A Chain A, Crystal Structure Of Anopheles Gambiae Adenosine Kinase In
Complex With P1,P4-Di(Adenosine-5) Tetraphosphate
pdb|3LOO|B Chain B, Crystal Structure Of Anopheles Gambiae Adenosine Kinase In
Complex With P1,P4-Di(Adenosine-5) Tetraphosphate
pdb|3LOO|C Chain C, Crystal Structure Of Anopheles Gambiae Adenosine Kinase In
Complex With P1,P4-Di(Adenosine-5) Tetraphosphate
Length = 365
Score = 376 bits (966), Expect = e-105, Method: Compositional matrix adjust.
Identities = 172/340 (50%), Positives = 250/340 (73%), Gaps = 2/340 (0%)
Query: 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGG 62
++G+L+G+GNPLLDIS+VV+ D LNKYD++ NNAILAEEKH+P+Y E+ KY EYIAGG
Sbjct: 22 RDGMLVGLGNPLLDISAVVEKDLLNKYDMQPNNAILAEEKHMPMYQELIEKYQAEYIAGG 81
Query: 63 ATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAV 122
+ QNS+RVAQW+LQ P + GC+G+D++ +++ + GVNV Y ++ TGTCAV
Sbjct: 82 SVQNSLRVAQWILQRPRTAIFFGCVGQDEYARILEERATSNGVNVQYQRSATSPTGTCAV 141
Query: 123 CVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHA 182
V G +RSL ANL+AAN + EHL+ N A ++ A++FY++GFF TVS +S VA+ A
Sbjct: 142 LVTGTQRSLCANLAAANDFTPEHLRSDGNRAYLQGAQFFYVSGFFFTVSFESALSVAKEA 201
Query: 183 AANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIAL 242
AA ++FMMNLSAPF+ +F+K+ LE++ PY+D +FGNETEA +K + T+D+ EI
Sbjct: 202 AATGRMFMMNLSAPFVPQFYKNNLEEIFPYVDVLFGNETEAIALAKEFNYGTEDLREIGK 261
Query: 243 KLSQWPKASEIRKRTAVITQGADPVVVAQDG--KLKKFPVIVLPKDKLVDTNGAGDAFVG 300
+++ PK + RKR +ITQG+DPV++ + G +++FPV L +++VDTNGAGDAFVG
Sbjct: 262 RIAALPKENGKRKRIVIITQGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAFVG 321
Query: 301 GFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEF 340
GFL+QL+Q + ++ C++ G + + IIQRSGCT+ +P F
Sbjct: 322 GFLAQLLQSRTVDVCIKCGIWAAREIIQRSGCTFEGEPSF 361
>pdb|2XTB|A Chain A, Crystal Structure Of Trypanosoma Brucei Rhodesiense
Adenosine Kinase Complexed With Activator
pdb|3OTX|A Chain A, Crystal Structure Of Trypanosoma Brucei Rhodesiense
Adenosine Kinase Complexed With Inhibitor Ap5a
pdb|3OTX|B Chain B, Crystal Structure Of Trypanosoma Brucei Rhodesiense
Adenosine Kinase Complexed With Inhibitor Ap5a
Length = 347
Score = 269 bits (687), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 134/332 (40%), Positives = 198/332 (59%), Gaps = 2/332 (0%)
Query: 12 NPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVA 71
NPLLD+S+ V D+FL KY ++ AIL E+ ++D++ NV Y+ GG+ N RVA
Sbjct: 15 NPLLDVSAHVSDEFLVKYGLERGTAILLSERQKGIFDDIEKMPNVRYVPGGSGLNVARVA 74
Query: 72 QWMLQIPGA--TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGER 129
QWM Q +Y+GCI D++G+ +K+ ++ G+ + A +G CAVC+ G ER
Sbjct: 75 QWMQQAYKGKFVTYVGCIADDRYGKVLKEAAEHEGIVMAVEHTTKAGSGACAVCITGKER 134
Query: 130 SLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVF 189
+LVA+L AAN SEH++ P +++++ FY +GF LTV + + A + +F
Sbjct: 135 TLVADLGAANHLSSEHMRSPAVVRAMDESRIFYFSGFTLTVDVNHVLQACRKAREVDGLF 194
Query: 190 MMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPK 249
M+NLSAPFI +FF L +VLPY D I N EA+ F+ + W+TD VEEIA +
Sbjct: 195 MINLSAPFIMQFFSAQLGEVLPYTDIIVANRHEAKEFANMMKWDTDCVEEIARRAVSEVP 254
Query: 250 ASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE 309
+ + R V T+ + V+A ++ PV L +DK++D NGAGDAF+GGFLS
Sbjct: 255 YTGTKGRVVVFTRDIESTVLATKDGVETVPVPQLDQDKVIDMNGAGDAFMGGFLSAYAVG 314
Query: 310 KPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
K + C G YT+ +IQR GC++PEKP F+
Sbjct: 315 KDLRRCCETGHYTAQEVIQRDGCSFPEKPSFS 346
>pdb|3UQ6|A Chain A, Adenosine Kinase From Schistosoma Mansoni In Complex With
Adenosine And Amp
pdb|3UQ6|B Chain B, Adenosine Kinase From Schistosoma Mansoni In Complex With
Adenosine And Amp
pdb|3UQ9|A Chain A, Adenosine Kinase From Schistosoma Mansoni In Complex With
Tubercidin
pdb|3UQ9|B Chain B, Adenosine Kinase From Schistosoma Mansoni In Complex With
Tubercidin
Length = 372
Score = 249 bits (635), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/342 (38%), Positives = 204/342 (59%), Gaps = 4/342 (1%)
Query: 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGA 63
EG + GMGNPLLDI DD KY++K +N +LAEEKH+ +YDE+ K + YIAGGA
Sbjct: 26 EGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGA 85
Query: 64 TQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKN-SKLAGVNVHYYEDESASTGTCAV 122
T N++++ QW++Q P SY+GCIG D G+ +K + S L V +E TG AV
Sbjct: 86 TLNTVKMIQWIIQKPFVCSYVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAV 145
Query: 123 CVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHA 182
V RS+V L AA H+++P W+LVEKA+ +YIAGF + + + +A+H+
Sbjct: 146 LVSEKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKAQVYYIAGFVINTCYEGMLKIAKHS 205
Query: 183 AANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIAL 242
N K+F NLSAPF+ +F +++++ Y + +FGNE+EA + +V G D V A
Sbjct: 206 LENEKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLEDTVHATAR 265
Query: 243 KLSQWPKA-SEIRKRTAVITQGADPVVV--AQDGKLKKFPVIVLPKDKLVDTNGAGDAFV 299
++ P A + RKR +IT+G +P++ + D ++ +F V D+++DTNGAGDAF
Sbjct: 266 YIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFA 325
Query: 300 GGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
GF++ ++ KP+ + A + II RSG + + ++
Sbjct: 326 AGFIADYIRGKPMITSLHAAVKAAAYIICRSGFSLGSRDSYS 367
>pdb|3VAQ|A Chain A, Adenosine Kinase From Schistosoma Mansoni In Complex With
Adenosine
pdb|3VAQ|B Chain B, Adenosine Kinase From Schistosoma Mansoni In Complex With
Adenosine
pdb|4DC3|A Chain A, Adenosine Kinase From Schistosoma Mansoni In Complex With
2- Fluoroadenosine
pdb|4DC3|B Chain B, Adenosine Kinase From Schistosoma Mansoni In Complex With
2- Fluoroadenosine
Length = 372
Score = 249 bits (635), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/342 (38%), Positives = 204/342 (59%), Gaps = 4/342 (1%)
Query: 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGA 63
EG + GMGNPLLDI DD KY++K +N +LAEEKH+ +YDE+ K + YIAGGA
Sbjct: 26 EGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGA 85
Query: 64 TQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKN-SKLAGVNVHYYEDESASTGTCAV 122
T N++++ QW++Q P SY+GCIG D G+ +K + S L V +E TG AV
Sbjct: 86 TLNTVKMIQWIIQKPFVCSYVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAV 145
Query: 123 CVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHA 182
V RS+V L AA H+++P W+LVEKA+ +YIAGF + + + +A+H+
Sbjct: 146 LVSEKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKAQVYYIAGFVINTCYEGMLKIAKHS 205
Query: 183 AANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIAL 242
N K+F NLSAPF+ +F +++++ Y + +FGNE+EA + +V G D V A
Sbjct: 206 LENEKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLEDTVHATAR 265
Query: 243 KLSQWPKA-SEIRKRTAVITQGADPVVV--AQDGKLKKFPVIVLPKDKLVDTNGAGDAFV 299
++ P A + RKR +IT+G +P++ + D ++ +F V D+++DTNGAGDAF
Sbjct: 266 YIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFA 325
Query: 300 GGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
GF++ ++ KP+ + A + II RSG + + ++
Sbjct: 326 AGFIADYIRGKPMITSLHAAVKAAAYIICRSGFSLGSRDSYS 367
>pdb|3VAS|A Chain A, Adenosine Kinase From Schistosoma Mansoni In Complex With
Adenosine In Occluded Loop Conformation
pdb|3VAS|B Chain B, Adenosine Kinase From Schistosoma Mansoni In Complex With
Adenosine In Occluded Loop Conformation
Length = 370
Score = 248 bits (634), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/342 (38%), Positives = 204/342 (59%), Gaps = 4/342 (1%)
Query: 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGA 63
EG + GMGNPLLDI DD KY++K +N +LAEEKH+ +YDE+ K + YIAGGA
Sbjct: 24 EGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGA 83
Query: 64 TQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKN-SKLAGVNVHYYEDESASTGTCAV 122
T N++++ QW++Q P SY+GCIG D G+ +K + S L V +E TG AV
Sbjct: 84 TLNTVKMIQWIIQKPFVCSYVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAV 143
Query: 123 CVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHA 182
V RS+V L AA H+++P W+LVEKA+ +YIAGF + + + +A+H+
Sbjct: 144 LVSEKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKAQVYYIAGFVINTCYEGMLKIAKHS 203
Query: 183 AANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIAL 242
N K+F NLSAPF+ +F +++++ Y + +FGNE+EA + +V G D V A
Sbjct: 204 LENEKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLEDTVHATAR 263
Query: 243 KLSQWPKA-SEIRKRTAVITQGADPVVV--AQDGKLKKFPVIVLPKDKLVDTNGAGDAFV 299
++ P A + RKR +IT+G +P++ + D ++ +F V D+++DTNGAGDAF
Sbjct: 264 YIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFA 323
Query: 300 GGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
GF++ ++ KP+ + A + II RSG + + ++
Sbjct: 324 AGFIADYIRGKPMITSLHAAVKAAAYIICRSGFSLGSRDSYS 365
>pdb|1LII|A Chain A, Structure Of T. Gondii Adenosine Kinase Bound To Adenosine
2 And Amp-Pcp
pdb|1LIJ|A Chain A, Structure Of T. Gondii Adenosine Kinase Bound To Prodrug 2
7-Iodotubercidin And Amp-Pcp
pdb|1LIK|A Chain A, Structure Of T. Gondii Adenosine Kinase Bound To Adenosine
Length = 363
Score = 185 bits (469), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 187/347 (53%), Gaps = 30/347 (8%)
Query: 7 LLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQN 66
+ +GNP+LD+ + V FL+++ +K +A LA + + +Y + ++N + GG+ N
Sbjct: 15 VFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTL-DQFNPTSLPGGSALN 73
Query: 67 SIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVG 126
S+RV Q +L+ PG+ Y+G IG D G+ +K+ G+ + STGTCAV +
Sbjct: 74 SVRVVQKLLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGTCAVLINE 133
Query: 127 GERSLVANLSAANCYKSEHLKKPENW-ALVEKAKYFYIAGFFLTVSPDSIQLVAEHA-AA 184
ER+L +L A + + PENW A FY + LT +P + VA +A
Sbjct: 134 KERTLCTHLGACGSF-----RIPENWTTFASGALIFYATAYTLTATPKNALEVAGYAHGI 188
Query: 185 NNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKL 244
N +F +NLSAPF E +KDA++ +L + + +FGNE E +KV E++AL +
Sbjct: 189 PNAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVA--AEKVALSV 246
Query: 245 SQWPKASEI-----RKRTA----------VITQGADPVVVAQ---DGK--LKKFPVIVLP 284
+ A E+ R TA V+T+G +PV+ A+ DG + + V V+
Sbjct: 247 ANKEHAVEVCTGALRLLTAGQNTGATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVA 306
Query: 285 KDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSG 331
+K+VDTNGAGDAFVGGFL L Q K +++C+ G + +IQ G
Sbjct: 307 AEKIVDTNGAGDAFVGGFLYGLSQGKTVKQCIMCGNACAQDVIQHVG 353
>pdb|1LIO|A Chain A, Structure Of Apo T. Gondii Adenosine Kinase
Length = 363
Score = 180 bits (457), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 185/347 (53%), Gaps = 30/347 (8%)
Query: 7 LLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQN 66
+ +GNP+LD+ + V FL+++ +K +A LA + + +Y + ++N + GG+ N
Sbjct: 15 VFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTL-DQFNPTSLPGGSALN 73
Query: 67 SIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVG 126
S+RV Q +L+ PG+ Y+G IG D G+ +K+ G+ + STGTCAV +
Sbjct: 74 SVRVVQKLLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGTCAVLINE 133
Query: 127 GERSLVANLSAANCYKSEHLKKPENW-ALVEKAKYFYIAGFFLTVSPDSIQLVAEHA-AA 184
ER+L +L A + + PE+W A FY + LT +P + VA +A
Sbjct: 134 KERTLCTHLGACGSF-----RIPEDWTTFASGALIFYATAYTLTATPKNALEVAGYAHGI 188
Query: 185 NNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKL 244
N +F +NLSAPF E +KDA++ +L + + +FGNE E +KV D + AL
Sbjct: 189 PNAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAD--KTALST 246
Query: 245 SQWPKASEI-----RKRTA----------VITQGADPVVVAQ---DGK--LKKFPVIVLP 284
+ A E+ R TA V+T+G +PV+ A+ DG + + V V+
Sbjct: 247 ANKEHAVEVCTGALRLLTAGQNTGATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVA 306
Query: 285 KDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSG 331
+K+VDTNGAGDAFVGGFL L Q K +++C+ G + +IQ G
Sbjct: 307 AEKIVDTNGAGDAFVGGFLYGLSQGKTVKQCIMCGNACAQDVIQHVG 353
>pdb|2ABS|A Chain A, Crystal Structure Of T. Gondii Adenosine Kinase Complexed
With Amp-Pcp
pdb|2A9Y|A Chain A, Crystal Structure Of T. Gondii Adenosine Kinase Complexed
With N6-Dimethyladenosine
pdb|2A9Z|A Chain A, Crystal Structure Of T. Gondii Adenosine Kinase Complexed
With N6-Dimethyladenosine And Amp-Pcp
pdb|2AA0|A Chain A, Crystal Structure Of T. Gondii Adenosine Kinase Complexed
With 6-Methylmercaptopurine Riboside
pdb|2AB8|A Chain A, Crystal Structure Of T. Gondii Adenosine Kinase Complexed
With 6-Methylmercaptopurine Riboside And Amp-Pcp
Length = 383
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/347 (33%), Positives = 184/347 (53%), Gaps = 30/347 (8%)
Query: 7 LLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQN 66
+ +GNP+LD+ + V FL+++ +K +A LA + + +Y + ++N + GG+ N
Sbjct: 35 VFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTL-DQFNPTSLPGGSALN 93
Query: 67 SIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVG 126
S+RV Q +L+ PG+ Y+G IG D G+ +K+ G+ + STG CAV +
Sbjct: 94 SVRVVQKLLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLINE 153
Query: 127 GERSLVANLSAANCYKSEHLKKPENW-ALVEKAKYFYIAGFFLTVSPDSIQLVAEHA-AA 184
ER+L +L A + + PE+W A FY + LT +P + VA +A
Sbjct: 154 KERTLCTHLGACGSF-----RLPEDWTTFASGALIFYATAYTLTATPKNALEVAGYAHGI 208
Query: 185 NNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKL 244
N +F +NLSAPF E +KDA++ +L + + +FGNE E +KV E+ AL
Sbjct: 209 PNAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVA--AEKTALST 266
Query: 245 SQWPKASEI-----RKRTA----------VITQGADPVVVAQ---DGK--LKKFPVIVLP 284
+ A E+ R TA V+T+G +PV+ A+ DG + + V V+
Sbjct: 267 ANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVA 326
Query: 285 KDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSG 331
+K+VDTNGAGDAFVGGFL L Q K +++C+ G + +IQ G
Sbjct: 327 AEKIVDTNGAGDAFVGGFLYALSQGKTVKQCIMCGNACAQDVIQHVG 373
>pdb|1DGM|A Chain A, Crystal Structure Of Adenosine Kinase From Toxoplasma
Gondii
Length = 363
Score = 179 bits (453), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/347 (33%), Positives = 184/347 (53%), Gaps = 30/347 (8%)
Query: 7 LLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQN 66
+ +GNP+LD+ + V FL+++ +K +A LA + + +Y + ++N + GG+ N
Sbjct: 15 VFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTL-DQFNPTSLPGGSALN 73
Query: 67 SIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVG 126
S+RV Q +L+ PG+ Y+G IG D G+ +K+ G+ + STG CAV +
Sbjct: 74 SVRVVQKLLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLINE 133
Query: 127 GERSLVANLSAANCYKSEHLKKPENW-ALVEKAKYFYIAGFFLTVSPDSIQLVAEHA-AA 184
ER+L +L A + + PE+W A FY + LT +P + VA +A
Sbjct: 134 KERTLCTHLGACGSF-----RLPEDWTTFASGALIFYATAYTLTATPKNAFEVAGYAHGI 188
Query: 185 NNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKL 244
N +F +NLSAPF E +KDA++ +L + + +FGNE E +KV E+ AL
Sbjct: 189 PNAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVA--AEKTALST 246
Query: 245 SQWPKASEI-----RKRTA----------VITQGADPVVVAQ---DGK--LKKFPVIVLP 284
+ A E+ R TA V+T+G +PV+ A+ DG + + V V+
Sbjct: 247 ANKEHAVEVCTGALRLLTAGQNTGATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVA 306
Query: 285 KDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSG 331
+K+VDTNGAGDAFVGGFL L Q K +++C+ G + +IQ G
Sbjct: 307 AEKIVDTNGAGDAFVGGFLYALSQGKTVKQCIMCGNACAQDVIQHVG 353
>pdb|4E3A|A Chain A, Crystal Structure Of Probable Sugar Kinase Protein From
Rhizobium Etli Cfn 42
pdb|4E3A|B Chain B, Crystal Structure Of Probable Sugar Kinase Protein From
Rhizobium Etli Cfn 42
Length = 352
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 143/337 (42%), Gaps = 41/337 (12%)
Query: 7 LLGMGNPLLDISSVVDDDFL--NKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGAT 64
+L +GN ++DI S +D FL N+ N I AE L LY +GG+
Sbjct: 28 VLTVGNAIVDIISRCNDQFLIDNQITKAAXNLIDAERAEL-LYSRXGPALEA---SGGSA 83
Query: 65 QNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESAS---TGTCA 121
N+ A + + G +Y G + D+ G+ + + GV HY + T
Sbjct: 84 GNT---AAGVANLGGKAAYFGNVAADQLGDIFTHDIRAQGV--HYQTKPKGAFPPTARSX 138
Query: 122 VCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLT--VSPDSIQLV 178
+ V GERS L A E ++ +V AK Y G+ + ++I
Sbjct: 139 IFVTEDGERSXNTYLGACVELGPEDVEAD----VVADAKVTYFEGYLWDPPRAKEAILDC 194
Query: 179 AEHAAANNKVFMMNLSAPFICEFFKDALEKVLPY--MDYIFGNETEARTFSKVQGWETDD 236
A A + + LS F + ++ + +D +F N EA + ++TDD
Sbjct: 195 ARIAHQHGREXSXTLSDSFCVDRYRGEFLDLXRSGKVDIVFANRQEALSL-----YQTDD 249
Query: 237 VEEIALKLSQWPKASEI--RKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGA 294
EE +++ K + + + AVI +G + ++ V + ++VDT GA
Sbjct: 250 FEEALNRIAADCKIAAVTXSENGAVILKGRE-----------RYYVNAIRIREVVDTTGA 298
Query: 295 GDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSG 331
GD F GFL Q + +E+C + GC + ++IQ+ G
Sbjct: 299 GDLFASGFLYGYTQGRSLEDCGKLGCLAAGIVIQQIG 335
>pdb|3UBO|A Chain A, The Crystal Structure Of Adenosine Kinase From
Sinorhizobium Meliloti
pdb|3UBO|B Chain B, The Crystal Structure Of Adenosine Kinase From
Sinorhizobium Meliloti
Length = 354
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 142/335 (42%), Gaps = 37/335 (11%)
Query: 7 LLGMGNPLLDISSVVDDDFLNKYDI--KLNNAILAEEKHLPLYDEMASKYNVEYIAGGAT 64
+L +GN ++DI + DD FL + I N I A+ L LY +GG+
Sbjct: 8 VLTIGNAIVDIIARCDDSFLEENGIIKGAXNLINADRAEL-LYSRXGPAVEA---SGGSA 63
Query: 65 QNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVC 123
N+ A + + G +Y G + D+ GE + + GV+ D T +
Sbjct: 64 GNT---AAGVASLGGRAAYFGKVADDQLGEIFTHDIRAQGVHFQTKPLDGHPPTARSXIF 120
Query: 124 VV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLT--VSPDSIQLVAE 180
V GERS L A E ++ +V ++K Y G+ + D+I+ A
Sbjct: 121 VTEDGERSXNTYLGACVELGPEDVEDD----VVAQSKVTYFEGYLWDPPRAKDAIREAAR 176
Query: 181 HAAANNKVFMMNLSAPFICEFFKDALEKVLP--YMDYIFGNETEARTFSKVQGWETDDVE 238
A A+ + LS F ++ ++ +D +F N EA +ET+D +
Sbjct: 177 IAHAHGRETAXTLSDSFCVHRYRSEFLELXRSGTVDIVFANRQEALAL-----YETEDFD 231
Query: 239 EIALKLSQWPK--ASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGD 296
L++ K A + + +V+ +GA+ V V VL +++VDT GAGD
Sbjct: 232 RALELLARDCKLAAVTLSEEGSVVVRGAERVRVGAS---------VL--EQVVDTTGAGD 280
Query: 297 AFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSG 331
+ GFL + +EEC + G + ++I + G
Sbjct: 281 LYAAGFLFGYTSGRSLEECSKLGNLAAGIVIGQIG 315
>pdb|3H49|A Chain A, Crystal Structure Of A Putative Ribokinase (Apo Form) From
E.Coli At 1.8a Resolution
pdb|3H49|B Chain B, Crystal Structure Of A Putative Ribokinase (Apo Form) From
E.Coli At 1.8a Resolution
pdb|3IN1|A Chain A, Crystal Structure Of A Putative Ribokinase In Complex With
Adp From E.Coli
pdb|3IN1|B Chain B, Crystal Structure Of A Putative Ribokinase In Complex With
Adp From E.Coli
Length = 325
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 123/289 (42%), Gaps = 23/289 (7%)
Query: 54 YNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDE 113
Y +E IA ++I A + ++ T+ IGKD G+ + + + +++ + +
Sbjct: 33 YPLERIAXTTGGDAINEATIISRLGHRTALXSRIGKDAAGQFILDHCRKENIDIQSLKQD 92
Query: 114 SASTGTCAVCVV--GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVS 171
+ + V +V GER+ V N + + +K ++A +AK +A F +
Sbjct: 93 VSIDTSINVGLVTEDGERTFVTNRNGS-LWKLNI--DDVDFARFSQAKLLSLASIFNSPL 149
Query: 172 PDSIQL--VAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKV 229
D L + A A + + P + E D E L Y+DY+F N EA+ +
Sbjct: 150 LDGKALTEIFTQAKARQXIICADXIKPRLNETLDDICE-ALSYVDYLFPNFAEAKLLT-- 206
Query: 230 QGWET-DDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKL 288
G ET D++ + L +T VI G D + + K P +
Sbjct: 207 -GKETLDEIADCFLACGV---------KTVVIKTGKDGCFIKRGDXTXKVPAV--AGITA 254
Query: 289 VDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEK 337
+DT GAGD F GF++ L++ K + EC R T+ + + G T K
Sbjct: 255 IDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVK 303
>pdb|1RK2|A Chain A, E. Coli Ribokinase Complexed With Ribose And Adp, Solved
In Space Group P212121
pdb|1RK2|B Chain B, E. Coli Ribokinase Complexed With Ribose And Adp, Solved
In Space Group P212121
pdb|1RK2|C Chain C, E. Coli Ribokinase Complexed With Ribose And Adp, Solved
In Space Group P212121
pdb|1RK2|D Chain D, E. Coli Ribokinase Complexed With Ribose And Adp, Solved
In Space Group P212121
pdb|1RKA|A Chain A, The Apo Form Of E. Coli Ribokinase
pdb|1RKS|A Chain A, E. Coli Ribokinase In Complex With D-Ribose
pdb|1GQT|A Chain A, Activation Of Ribokinase By Monovalent Cations
pdb|1GQT|B Chain B, Activation Of Ribokinase By Monovalent Cations
pdb|1GQT|C Chain C, Activation Of Ribokinase By Monovalent Cations
pdb|1GQT|D Chain D, Activation Of Ribokinase By Monovalent Cations
pdb|1RKD|A Chain A, E. Coli Ribokinase Complexed With Ribose And Adp
Length = 309
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 111/260 (42%), Gaps = 25/260 (9%)
Query: 82 SYIGCIGKDKFGEEMKKNSKLAGVNVHYYE---DESASTGTCAVCVVGGERSLVANLSAA 138
++I C G D GE +++ +LA N+ + STG + V G +++ + A
Sbjct: 59 AFIACTGDDSIGESVRQ--QLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGA 116
Query: 139 NCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFI 198
N S L + + + + L +S+ A+ A N + +N P
Sbjct: 117 NAALSPALVEAQRERIANASALL----MQLESPLESVMAAAKIAHQNKTIVALN---PAP 169
Query: 199 CEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTA 258
D L L +D I NETEA + ++ +D + A L E RT
Sbjct: 170 ARELPDEL---LALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLH------EKGIRTV 220
Query: 259 VITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRA 318
+IT G+ V + +G+ ++ P + + VDT AGD F G ++ L++EKP+ E +R
Sbjct: 221 LITLGSRGVWASVNGEGQRVPGF---RVQAVDTIAAGDTFNGALITALLEEKPLPEAIRF 277
Query: 319 GCYTSHVIIQRSGCTYPEKP 338
+ + + R G P P
Sbjct: 278 AHAAAAIAVTRKGA-QPSVP 296
>pdb|2C49|A Chain A, Crystal Structure Of Methanocaldococcus Jannaschii
Nucleoside Kinase - An Archaeal Member Of The Ribokinase
Family
pdb|2C49|B Chain B, Crystal Structure Of Methanocaldococcus Jannaschii
Nucleoside Kinase - An Archaeal Member Of The Ribokinase
Family
pdb|2C4E|A Chain A, Crystal Structure Of Methanocaldococcus Jannaschii
Nucleoside Kinase - An Archaeal Member Of The Ribokinase
Family
Length = 302
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 98/227 (43%), Gaps = 36/227 (15%)
Query: 126 GGERSLV-ANLSAANCYKSEHLKKPENWALVEKAK---YFYIAG---FFLTVSPDSIQLV 178
G ER L +++ + Y SE + P+ W +K F++ G + ++P +
Sbjct: 73 GYERYLKNLDINISKLYYSEEEETPKAWIFTDKDNNQITFFLWGAAKHYKELNPPNFNTE 132
Query: 179 AEHAAANNKVFMMNLSAPF-------------ICEFFKDALEKVLPYMDYIFGNETEART 225
H A + F + + + ++ K+ L +++ + +++F N+ E
Sbjct: 133 IVHIATGDPEFNLKCAKKAYGNNLVSFDPGQDLPQYSKEMLLEIIEHTNFLFMNKHEFER 192
Query: 226 FSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPK 285
S + +E DD E R ++T+G+ V+ K KK + +
Sbjct: 193 ASNLLNFEIDDYLE--------------RVDALIVTKGSKGSVIYT--KDKKIEIPCIKA 236
Query: 286 DKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGC 332
K++D GAGD++ GFLS V+ +E+C G T+ +++ GC
Sbjct: 237 GKVIDPTGAGDSYRAGFLSAYVKGYDLEKCGLIGAATASFVVEAKGC 283
>pdb|3LHX|A Chain A, Crystal Structure Of A Ketodeoxygluconokinase (Kdgk) From
Shigella Flexneri
pdb|3LHX|B Chain B, Crystal Structure Of A Ketodeoxygluconokinase (Kdgk) From
Shigella Flexneri
Length = 319
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 124/307 (40%), Gaps = 58/307 (18%)
Query: 61 GGATQN-SIRVAQWMLQIPGATSYIGCIGKDKFGEE---------------MKKNSKLAG 104
GG T N S+ +A+ + Y+ +G D F ++ + ++L G
Sbjct: 29 GGDTLNTSVYIARQVDPAALTVHYVTALGTDSFSQQXLDAWHGENVDTSLTQRXENRLPG 88
Query: 105 VNVHYYEDESASTGTCAVCVVGGERSLV--ANLSAANCYKSEHLKKPENWALVEKA---K 159
+ +Y E +S GER+ N +AA + L ++ A+ E+
Sbjct: 89 L--YYIETDST-----------GERTFYYWRNEAAAKFW----LASEQSAAICEELANFD 131
Query: 160 YFYIAGFFLTV-SPDS----IQLVAEHAAANNKVFMMNLSAPFIC---EFFKDALEKVLP 211
Y Y++G L + SP S + L+ E A KV N P + E + ++ L
Sbjct: 132 YLYLSGISLAILSPTSREKLLSLLRECRAKGGKVIFDNNYRPRLWASKEETQQVYQQXLE 191
Query: 212 YMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQ 271
D F + W VE++ + + V+ +GAD +V+
Sbjct: 192 CTDIAFLTLDDEDAL-----WGQQPVEDVI------ARTHNAGVKEVVVKRGADSCLVSI 240
Query: 272 DGK-LKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRS 330
G+ L P + LPK+K++DT AGD+F G+L+ + E + G T+ +IQ
Sbjct: 241 AGEALVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGGSAENAAKRGHLTASTVIQYR 300
Query: 331 GCTYPEK 337
G P +
Sbjct: 301 GAIIPRE 307
>pdb|2FV7|A Chain A, Crystal Structure Of Human Ribokinase
pdb|2FV7|B Chain B, Crystal Structure Of Human Ribokinase
Length = 331
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 119/268 (44%), Gaps = 27/268 (10%)
Query: 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVVGGERSLVANLSAAN 139
TS + +GKD FG + +N K ++ + Y+ + A+TGT ++ V ++++ ++ AN
Sbjct: 78 TSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGAN 137
Query: 140 CY-KSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFI 198
+E L+ N ++ +AK L ++P + L A A + V + AP I
Sbjct: 138 LLLNTEDLRAAAN--VISRAKVMVCQ---LEITP-ATSLEALTMARRSGVKTLFNPAPAI 191
Query: 199 CEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTA 258
D + D NE+EA + + D E AL L + ++
Sbjct: 192 ----ADLDPQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVL--LKRGCQV----V 241
Query: 259 VITQGADPVVVAQ--DGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLV--QEKPIEE 314
+IT GA+ VV + + K P K K VDT GAGD+FVG L +E+
Sbjct: 242 IITLGAEGCVVLSQTEPEPKHIPT---EKVKAVDTTGAGDSFVGALAFYLAYYPNLSLED 298
Query: 315 CVRAGCYTSHVIIQRSGC--TYPEKPEF 340
+ + + V +Q +G +YP K +
Sbjct: 299 MLNRSNFIAAVSVQAAGTQSSYPYKKDL 326
>pdb|1TZ6|A Chain A, Crystal Structure Of Aminoimidazole Riboside Kinase From
Salmonella Enterica Complexed With Aminoimidazole
Riboside And Atp Analog
pdb|1TZ6|B Chain B, Crystal Structure Of Aminoimidazole Riboside Kinase From
Salmonella Enterica Complexed With Aminoimidazole
Riboside And Atp Analog
Length = 339
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 33/256 (12%)
Query: 61 GGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTC 120
GGA+ N V + ++ G +IGC+G D G +++ + GV+V + ++ T
Sbjct: 50 GGASAN---VGVCVARLGGECGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTS-- 104
Query: 121 AVCVVG----GERSLVANLS-AANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSI 175
AV +V GERS + A+ Y S P++ + ++FY + LT P
Sbjct: 105 AVLIVNLTADGERSFTYLVHPGADTYVS-----PQDLPPFRQYEWFYFSSIGLTDRP--- 156
Query: 176 QLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETD 235
A A M + F + K+ D I + + + D
Sbjct: 157 ---AREACLEGARRMREAGGYVL--FDVNLRSKMWGNTDEIPELIARSAALASICKVSAD 211
Query: 236 DVEEIALKLSQWPKAS----EIRKRTAVITQGAD-PVVVAQDGKLKKFPVIVLPKDKLVD 290
++ +++ S W A ++ T +I+ GAD +++ +G+ FP P+ +VD
Sbjct: 212 ELCQLS-GASHWQDARYYLRDLGCDTTIISLGADGALLITAEGEFH-FPA---PRVDVVD 266
Query: 291 TNGAGDAFVGGFLSQL 306
T GAGDAFVGG L L
Sbjct: 267 TTGAGDAFVGGLLFTL 282
>pdb|1TYY|A Chain A, Crystal Structure Of Aminoimidazole Riboside Kinase From
Salmonella Enterica
pdb|1TYY|B Chain B, Crystal Structure Of Aminoimidazole Riboside Kinase From
Salmonella Enterica
pdb|1TZ3|A Chain A, Crystal Structure Of Aminoimidazole Riboside Kinase
Complexed With Aminoimidazole Riboside
pdb|1TZ3|B Chain B, Crystal Structure Of Aminoimidazole Riboside Kinase
Complexed With Aminoimidazole Riboside
Length = 339
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 43/263 (16%)
Query: 61 GGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTC 120
GGA+ N V + ++ G +IGC+G D G +++ + GV+V + ++ T
Sbjct: 50 GGASAN---VGVCVARLGGECGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTS-- 104
Query: 121 AVCVVG----GERSLVANLS-AANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSI 175
AV +V GERS + A+ Y S P++ + ++FY + LT P +
Sbjct: 105 AVLIVNLTADGERSFTYLVHPGADTYVS-----PQDLPPFRQYEWFYFSSIGLTDRP-AR 158
Query: 176 QLVAEHA-----AANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQ 230
+ E A A +F +NL + K D I + + +
Sbjct: 159 EACLEGARRXREAGGYVLFDVNLRS------------KXWGNTDEIPELIARSAALASIC 206
Query: 231 GWETDDVEEIALKLSQWPKAS----EIRKRTAVITQGAD-PVVVAQDGKLKKFPVIVLPK 285
D++ +++ S W A ++ T +I+ GAD +++ +G+ FP P+
Sbjct: 207 KVSADELCQLS-GASHWQDARYYLRDLGCDTTIISLGADGALLITAEGEFH-FPA---PR 261
Query: 286 DKLVDTNGAGDAFVGGFLSQLVQ 308
+VDT GAGDAFVGG L L +
Sbjct: 262 VDVVDTTGAGDAFVGGLLFTLSR 284
>pdb|1V19|A Chain A, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus
pdb|1V19|B Chain B, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus
pdb|1V1A|A Chain A, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus
With Bound 2-Keto-3-Deoxygluconate And Adp
pdb|1V1A|B Chain B, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus
With Bound 2-Keto-3-Deoxygluconate And Adp
pdb|1V1B|A Chain A, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus
With Bound Atp
pdb|1V1B|B Chain B, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus
With Bound Atp
pdb|1V1B|C Chain C, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus
With Bound Atp
pdb|1V1B|D Chain D, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus
With Bound Atp
pdb|1V1S|A Chain A, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus
(Crystal Form 2)
pdb|1V1S|B Chain B, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus
(Crystal Form 2)
pdb|1V1S|C Chain C, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus
(Crystal Form 2)
pdb|1V1S|D Chain D, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus
(Crystal Form 2)
pdb|1V1S|E Chain E, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus
(Crystal Form 2)
pdb|1V1S|F Chain F, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus
(Crystal Form 2)
Length = 309
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 117/280 (41%), Gaps = 41/280 (14%)
Query: 50 MASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHY 109
+ K +E GGA N VA + ++ ++G +G+D+ G +++ + GV++ +
Sbjct: 22 LRGKRLLEVYVGGAEVN---VAVALARLGVKVGFVGRVGEDELGAMVEERLRAEGVDLTH 78
Query: 110 YEDESASTGTC--AVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFF 167
+ TG +G R +A + P+ +E ++ +++G
Sbjct: 79 FRRAPGFTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDPDY---LEGVRFLHLSGIT 135
Query: 168 LTVSPDS--IQLVAEHAAANNKV-------FMMNLSAPFICEFFKDALEKVLPYMDYIFG 218
+SP++ L A A V + L +P E + LE+ LP +D +F
Sbjct: 136 PALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWSP---EEARGFLERALPGVDLLFL 192
Query: 219 NETEART-FSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKK 277
+E EA F +V E AL+ P+ V+ +GA DG+ +
Sbjct: 193 SEEEAELLFGRV---------EEALRALSAPEV--------VLKRGAKGAWAFVDGRRVE 235
Query: 278 FPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVR 317
+ + VD GAGDAF G+L+ V P+EE +R
Sbjct: 236 GSAFAV---EAVDPVGAGDAFAAGYLAGAVWGLPVEERLR 272
>pdb|2NWH|A Chain A, Carbohydrate Kinase From Agrobacterium Tumefaciens
Length = 317
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 62/134 (46%), Gaps = 23/134 (17%)
Query: 206 LEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRK---RTAVITQ 262
L+ L +D +F NE EAR + E A + WP +RK V+T+
Sbjct: 176 LKAALGDIDILFMNEAEARALTG----------ETAENVRDWPNI--LRKAGLSGGVVTR 223
Query: 263 GADPVVVAQDGKLKKF---PVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAG 319
GA VV A +G K P+I ++ D GAGDA G+L+ + + K I E +R G
Sbjct: 224 GASEVV-AFNGTEKAILHPPLI----REVKDVTGAGDAMASGYLAAIAEGKTIREALRQG 278
Query: 320 CYTSHVIIQRSGCT 333
+ + +Q S T
Sbjct: 279 AAAAAITVQSSFAT 292
>pdb|1VM7|A Chain A, Crystal Structure Of Ribokinase (Tm0960) From Thermotoga
Maritima At 2.15 A Resolution
pdb|1VM7|B Chain B, Crystal Structure Of Ribokinase (Tm0960) From Thermotoga
Maritima At 2.15 A Resolution
Length = 311
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 59/135 (43%), Gaps = 11/135 (8%)
Query: 207 EKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADP 266
E++ Y+DY+ NE E SK E VE+ A K E+ + ++ G
Sbjct: 178 EEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEKAAEKFL------ELGVKNVIVKLGDKG 231
Query: 267 VVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVI 326
V++ + K FP K K VDT AGD F G F L + K EE V G + +
Sbjct: 232 VLLVNKNEKKHFPTF---KVKAVDTTAAGDVFNGAFAVALSEGKNPEEAVIFGTAAAAIS 288
Query: 327 IQRSGC--TYPEKPE 339
+ R G + P + E
Sbjct: 289 VTRLGAQSSIPAREE 303
>pdb|3Q1Y|A Chain A, Allosteric Regulation By Lysine Residue: A Novel
Anion-Hole Formation In The Ribokinase Family
Length = 320
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 259 VITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVR- 317
V++ GA + A +GKL + ++ PK + + GAGD FVG F++ L PI E ++
Sbjct: 219 VVSLGAKGSICAHNGKLYQ---VIPPKVQERNDTGAGDVFVGAFIAGLAMNMPITETLKV 275
Query: 318 -AGCYTSHVIIQRS 330
GC S V+ Q S
Sbjct: 276 ATGCSASAVMQQDS 289
>pdb|3HIC|A Chain A, The Crystal Structure Of Phosphofructokinase(Lin2199)from
Listeria Innocua
pdb|3IE7|A Chain A, The Crystal Structure Of Phosphofructokinase (Lin2199)
From Listeria Innocua In Complex With Atp At 1.6a
pdb|3JUL|A Chain A, Crystal Structure Of Listeria Innocua
D-Tagatose-6-Phosphate Kinase Bound With Substrate
Length = 320
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 259 VITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVR- 317
V++ GA + A +GKL + ++ PK + + GAGD FVG F++ L PI E ++
Sbjct: 219 VVSLGAKGSICAHNGKLYQ---VIPPKVQERNDTGAGDVFVGAFIAGLAXNXPITETLKV 275
Query: 318 -AGCYTSHVIIQRS 330
GC S V Q S
Sbjct: 276 ATGCSASKVXQQDS 289
>pdb|4DU5|A Chain A, Crystal Structure Of Pfkb Protein From Polaromonas Sp.
Js666
pdb|4DU5|B Chain B, Crystal Structure Of Pfkb Protein From Polaromonas Sp.
Js666
pdb|4DU5|C Chain C, Crystal Structure Of Pfkb Protein From Polaromonas Sp.
Js666
pdb|4DU5|D Chain D, Crystal Structure Of Pfkb Protein From Polaromonas Sp.
Js666
Length = 336
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 81/204 (39%), Gaps = 30/204 (14%)
Query: 150 ENWALVEKAKYFYIAGFFLTVSPDSIQLVAE-----HAAANNKVFMMNLSAPFIC--EFF 202
E W L A++ + G F +S ++ + AA + F NL E
Sbjct: 147 EAWLL--SARHLHATGVFPAISATTLPAARKTXDLXRAAGRSVSFDPNLRPTLWATPELX 204
Query: 203 KDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQ 262
+DA+ + D++ E R + ET E +A Q + + V+
Sbjct: 205 RDAINDLATRADWVLPGXEEGRFLTG----ETTP-EGVARFYRQ------LGAKLVVVKL 253
Query: 263 GADPVVV---AQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAG 319
GA+ A G++ FPV ++VDT GAGD F G +S L+ + E V+ G
Sbjct: 254 GAEGAYFDGEAGSGRVAGFPVA-----EVVDTVGAGDGFAVGVISALLDGLGVPEAVKRG 308
Query: 320 CYTSHVIIQRSGCT--YPEKPEFN 341
+ +Q G + P + E N
Sbjct: 309 AWIGARAVQVLGDSEGLPTRAELN 332
>pdb|3B1N|A Chain A, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Complex With Adp-Mizoribine
pdb|3B1N|B Chain B, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Complex With Adp-Mizoribine
pdb|3B1O|A Chain A, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Ligand-Free Form
pdb|3B1O|B Chain B, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Ligand-Free Form
pdb|3B1P|A Chain A, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Complex With Adp-Inosine
pdb|3B1Q|A Chain A, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Complex With Inosine
pdb|3B1Q|B Chain B, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Complex With Inosine
pdb|3B1Q|C Chain C, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Complex With Inosine
pdb|3B1Q|D Chain D, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Complex With Inosine
pdb|3B1Q|E Chain E, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Complex With Inosine
pdb|3B1Q|F Chain F, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Complex With Inosine
Length = 326
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 53/141 (37%), Gaps = 28/141 (19%)
Query: 170 VSPDSIQLVAEHAAANNKVFMMNLSAPFICE-------FFKDALEKVLPYMDYIFGNETE 222
V PD Q + +H + PFI + F L + + YI N+ E
Sbjct: 141 VGPDGFQGMVQHTEE-----LAQAGVPFIFDPGQGLPLFDGATLRRSIELATYIAVNDYE 195
Query: 223 ARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIV 282
A+ GW D++ R + +IT+G + ++ P +
Sbjct: 196 AKLVCDKTGWSEDEIAS--------------RVQALIITRGEHGATIRHRDGTEQIPAV- 240
Query: 283 LPKDKLVDTNGAGDAFVGGFL 303
++++D G GDAF GG L
Sbjct: 241 -RAERVIDPTGCGDAFRGGLL 260
>pdb|3B1R|A Chain A, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Complex With Amp-Mg-Amp
pdb|3B1R|B Chain B, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Complex With Amp-Mg-Amp
pdb|3B1R|C Chain C, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Complex With Amp-Mg-Amp
pdb|3B1R|D Chain D, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Complex With Amp-Mg-Amp
pdb|3B1R|E Chain E, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Complex With Amp-Mg-Amp
pdb|3B1R|F Chain F, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Complex With Amp-Mg-Amp
Length = 320
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 53/141 (37%), Gaps = 28/141 (19%)
Query: 170 VSPDSIQLVAEHAAANNKVFMMNLSAPFICE-------FFKDALEKVLPYMDYIFGNETE 222
V PD Q + +H + PFI + F L + + YI N+ E
Sbjct: 149 VGPDGFQGMVQHTEE-----LAQAGVPFIFDPGQGLPLFDGATLRRSIELATYIAVNDYE 203
Query: 223 ARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIV 282
A+ GW D++ R + +IT+G + ++ P +
Sbjct: 204 AKLVCDKTGWSEDEIAS--------------RVQALIITRGEHGATIRHRDGTEQIPAV- 248
Query: 283 LPKDKLVDTNGAGDAFVGGFL 303
++++D G GDAF GG L
Sbjct: 249 -RAERVIDPTGCGDAFRGGLL 268
>pdb|3B3L|A Chain A, Crystal Structures Of Alternatively-Spliced Isoforms Of
Human Ketohexokinase
pdb|3B3L|B Chain B, Crystal Structures Of Alternatively-Spliced Isoforms Of
Human Ketohexokinase
pdb|3B3L|C Chain C, Crystal Structures Of Alternatively-Spliced Isoforms Of
Human Ketohexokinase
pdb|3B3L|D Chain D, Crystal Structures Of Alternatively-Spliced Isoforms Of
Human Ketohexokinase
Length = 298
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 133/329 (40%), Gaps = 53/329 (16%)
Query: 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGG 62
+E +L +G +LD+ S+VD KY P D + + GG
Sbjct: 2 EEKQILCVGLVVLDVISLVD-----KY---------------PKEDSEIRCLSQRWQRGG 41
Query: 63 ATQNSIRVAQWMLQIPGA-TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCA 121
NS V L + GA +++G + + + + + GV+V +S +
Sbjct: 42 NASNSCTV----LSLLGAPCAFMGSMAPGHVADFLVADFRRRGVDVSQVAWQSKGDTPSS 97
Query: 122 VCVVG---GERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLV 178
C++ G R++V + ++ + +K + + + K+ +I G + +Q +
Sbjct: 98 CCIINNSNGNRTIVLHDTSLPDVSATDFEKVD----LTQFKWIHIEGRNASEQVKMLQRI 153
Query: 179 AEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVE 238
H + +S E ++ L ++ Y D +F ++ A+ G+++ E
Sbjct: 154 DAHNTRQPPEQKIRVSVEV--EKPREELFQLFGYGDVVFVSKDVAKHL----GFQS--AE 205
Query: 239 EIALKLSQWPKASEIRKRTAVIT----QGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGA 294
E L +RK ++ +GAD + DGKL P ++VDT GA
Sbjct: 206 EALRGLY-----GRVRKGAVLVCAWAEEGAD--ALGPDGKL--LHSDAFPPPRVVDTLGA 256
Query: 295 GDAFVGGFLSQLVQEKPIEECVRAGCYTS 323
GD F + L Q + ++E +R GC +
Sbjct: 257 GDTFNASVIFSLSQGRSVQEALRFGCQVA 285
>pdb|3NBV|A Chain A, X-Ray Structure Of Ketohexokinase In Complex With Amp-Pnp
And Fructose
pdb|3NBV|B Chain B, X-Ray Structure Of Ketohexokinase In Complex With Amp-Pnp
And Fructose
pdb|3NBW|A Chain A, X-Ray Structure Of Ketohexokinase In Complex With A
Pyrazole Compound
pdb|3NBW|B Chain B, X-Ray Structure Of Ketohexokinase In Complex With A
Pyrazole Compound
pdb|3NC2|A Chain A, X-Ray Structure Of Ketohexokinase With A Quinazoline
pdb|3NC2|B Chain B, X-Ray Structure Of Ketohexokinase With A Quinazoline
pdb|3NC9|A Chain A, X-Ray Structure Of Ketohexokinase Complexed With An
Indazole Compound
pdb|3NC9|B Chain B, X-Ray Structure Of Ketohexokinase Complexed With An
Indazole Compound
pdb|3NCA|A Chain A, X-Ray Structure Of Ketohexokinase In Complex With A Thieno
Pyridinol Compound
pdb|3NCA|B Chain B, X-Ray Structure Of Ketohexokinase In Complex With A Thieno
Pyridinol Compound
pdb|3RO4|A Chain A, X-Ray Structure Of Ketohexokinase In Complex With An
Indazole Compound Derivative
pdb|3RO4|B Chain B, X-Ray Structure Of Ketohexokinase In Complex With An
Indazole Compound Derivative
pdb|3Q92|A Chain A, X-Ray Structure Of Ketohexokinase In Complex With A
Pyrimidopyrimidine Analog 1
pdb|3Q92|B Chain B, X-Ray Structure Of Ketohexokinase In Complex With A
Pyrimidopyrimidine Analog 1
pdb|3QA2|A Chain A, X-Ray Structure Of Ketohexokinase In Complex With A
Pyrimidopyrimidine Analog 2
pdb|3QA2|B Chain B, X-Ray Structure Of Ketohexokinase In Complex With A
Pyrimidopyrimidine Analog 2
pdb|3QAI|A Chain A, X-Ray Structure Of Ketohexokinase In Complex With A
Pyrimidopyrimidine Analog 3
pdb|3QAI|B Chain B, X-Ray Structure Of Ketohexokinase In Complex With A
Pyrimidopyrimidine Analog 3
Length = 313
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 131/325 (40%), Gaps = 53/325 (16%)
Query: 7 LLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQN 66
+L +G +LD+ S+VD KY P D + + GG N
Sbjct: 21 ILCVGLVVLDVISLVD-----KY---------------PKEDSEIRCLSQRWQRGGNASN 60
Query: 67 SIRVAQWMLQIPGA-TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV 125
S V L + GA +++G + + + + + GV+V +S + C++
Sbjct: 61 SCTV----LSLLGAPCAFMGSMAPGHVADFLVADFRRRGVDVSQVAWQSKGDTPSSCCII 116
Query: 126 G---GERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHA 182
G R++V + ++ + +K + + + K+ +I G + +Q + H
Sbjct: 117 NNSNGNRTIVLHDTSLPDVSATDFEKVD----LTQFKWIHIEGRNASEQVKMLQRIDAHN 172
Query: 183 AANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIAL 242
+ +S E ++ L ++ Y D +F ++ A+ G+++ EE
Sbjct: 173 TRQPPEQKIRVSVEV--EKPREELFQLFGYGDVVFVSKDVAKHL----GFQS--AEEALR 224
Query: 243 KLSQWPKASEIRKRTAVIT----QGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAF 298
L +RK ++ +GAD + DGKL P ++VDT GAGD F
Sbjct: 225 GLY-----GRVRKGAVLVCAWAEEGAD--ALGPDGKL--LHSDAFPPPRVVDTLGAGDTF 275
Query: 299 VGGFLSQLVQEKPIEECVRAGCYTS 323
+ L Q + ++E +R GC +
Sbjct: 276 NASVIFSLSQGRSVQEALRFGCQVA 300
>pdb|3KD6|A Chain A, Crystal Structure Of Nucleoside Kinase From Chlorobium
Tepidum In Complex With Amp
pdb|3KD6|B Chain B, Crystal Structure Of Nucleoside Kinase From Chlorobium
Tepidum In Complex With Amp
Length = 313
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 13/103 (12%)
Query: 206 LEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGAD 265
L+KVL +D N++EAR S + + V+ + PK T +I +G
Sbjct: 162 LKKVLARVDVFIVNDSEARLLSG----DPNLVKTARIIREXGPK-------TLIIKKGEH 210
Query: 266 PVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQ 308
++ D + F P + + D GAGD F GGF+ L +
Sbjct: 211 GALLFTDNGI--FAAPAFPLESIYDPTGAGDTFAGGFIGHLAR 251
>pdb|3BF5|A Chain A, Crystal Structure Of Putative Ribokinase (10640157) From
Thermoplasma Acidophilum At 1.91 A Resolution
pdb|3BF5|B Chain B, Crystal Structure Of Putative Ribokinase (10640157) From
Thermoplasma Acidophilum At 1.91 A Resolution
Length = 306
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 50/130 (38%), Gaps = 23/130 (17%)
Query: 198 ICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRT 257
I ++ KD L+K N+ E R F + G + PK T
Sbjct: 171 IHKYSKDELKKFHEISYXSIFNDHEYRVFREXTGLSS-------------PKV------T 211
Query: 258 AVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVR 317
++T G + DGK FP I P DT GAGD+F G L + IE+
Sbjct: 212 TIVTNGERGSSLFXDGKKYDFPAI--PSSG--DTVGAGDSFRAGLYLALYNRRSIEKGXI 267
Query: 318 AGCYTSHVII 327
G +H +I
Sbjct: 268 YGTIIAHHVI 277
>pdb|2QHP|A Chain A, Crystal Structure Of Fructokinase (Np_810670.1) From
Bacteroides Thetaiotaomicron Vpi-5482 At 1.80 A
Resolution
Length = 296
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 12/152 (7%)
Query: 187 KVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQ 246
K+F +NL F + K+ L + + + N+ E T S+ G+ D+++
Sbjct: 149 KIFDINLRQDF---YTKEVLRESFKRCNILKINDEELVTISRXFGYPGIDLQD-----KC 200
Query: 247 WPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQL 306
W ++ + ++T G + V G + PK + DT GAGD+F F + +
Sbjct: 201 WILLAKYNLKXLILTCGINGSYVFTPGVVS---FQETPKVPVADTVGAGDSFTAAFCASI 257
Query: 307 VQEKPIEECVRAGCYTSHVIIQRSGCTYPEKP 338
+ K + E + S + +SG PE P
Sbjct: 258 LNGKSVPEAHKLAVEVSAYVCTQSGAX-PELP 288
>pdb|2HQQ|A Chain A, Crystal Structure Of Human Ketohexokinase Complexed To
Different Sugar Molecules
pdb|2HW1|A Chain A, Crystal Structure Of Human Ketohexokinase Complexed To
Different Sugar Molecules
Length = 298
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 262 QGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGC 320
+GAD + DGKL P ++VDT GAGD F + L Q + ++E +R GC
Sbjct: 228 EGAD--ALGPDGKL--LHSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRSVQEALRFGC 282
>pdb|2HLZ|A Chain A, Crystal Structure Of Human Ketohexokinase (Casp Target)
pdb|2HLZ|B Chain B, Crystal Structure Of Human Ketohexokinase (Casp Target)
pdb|2HLZ|C Chain C, Crystal Structure Of Human Ketohexokinase (Casp Target)
pdb|2HLZ|D Chain D, Crystal Structure Of Human Ketohexokinase (Casp Target)
Length = 312
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 262 QGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGC 320
+GAD + DGKL P ++VDT GAGD F + L Q + ++E +R GC
Sbjct: 242 EGAD--ALGPDGKL--LHSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRSVQEALRFGC 296
>pdb|2PKF|A Chain A, Crystal Structure Of M Tuberculosis Adenosine Kinase (Apo)
pdb|2PKF|B Chain B, Crystal Structure Of M Tuberculosis Adenosine Kinase (Apo)
pdb|2PKK|A Chain A, Crystal Structure Of M Tuberculosis Adenosine Kinase
Complexed With 2- Fluro Adenosine
pdb|2PKN|A Chain A, Crystal Structure Of M Tuberculosis Adenosine Kinase
Complexed With Amp-Pcp (Non-Hydrolyzable Atp Analog)
pdb|2PKM|A Chain A, Crystal Structure Of M Tuberculosis Adenosine Kinase
Complexed With Adenosine
Length = 334
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 17/119 (14%)
Query: 215 YIFGNETEARTFSKVQGW-ETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDG 273
Y+F N+ E GW E D + +I L++ T + +G D +V DG
Sbjct: 201 YLFTNDYEWDLLLSKTGWSEADVMAQIDLRV------------TTLGPKGVD--LVEPDG 246
Query: 274 KLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGC 332
V V+P+ D G GDAF GFL+ +E + G + ++++ +G
Sbjct: 247 T--TIHVGVVPETSQTDPTGVGDAFRAGFLTGRSAGLGLERSAQLGSLVAVLVLESTGT 303
>pdb|3RY7|A Chain A, Crystal Sructure Of Sa239
Length = 304
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 106/258 (41%), Gaps = 29/258 (11%)
Query: 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYY-EDESASTGTCAVCVVGGERSLVANLSAAN 139
T++I IG D + + ++ K+A ++ Y + A TG + V ++ + AN
Sbjct: 57 TTFITKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQNTIYVYGGAN 116
Query: 140 CYKSEHLKKPENWALVEKAKYFYIAGFF----LTVSPDSIQLVAEHAAANNKVFMMNLSA 195
+ PE+ V AK I F L V +I E A A+ ++N A
Sbjct: 117 MTMT-----PED---VINAKDAIINADFVVAQLEVPIPAIISAFEIAKAHGVTTVLN-PA 167
Query: 196 PFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRK 255
P K ++L +D I NETEA S ++ +++ A I
Sbjct: 168 PA-----KALPNELLSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYFL------SIGI 216
Query: 256 RTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKP-IEE 314
+T +IT G A + + K +DT AGD F+G F+S+L + + + +
Sbjct: 217 KTVLITLGKQGTYFATKNQSQHIEAY---KVNAIDTTAAGDTFIGAFVSRLNKSQDNLAD 273
Query: 315 CVRAGCYTSHVIIQRSGC 332
+ G S + +Q+ G
Sbjct: 274 AIDFGNKASSLTVQKHGA 291
>pdb|3HJ6|A Chain A, Structure Of Halothermothrix Orenii Fructokinase (Frk)
pdb|3HJ6|B Chain B, Structure Of Halothermothrix Orenii Fructokinase (Frk)
Length = 327
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 252 EIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKP 311
E+ + ++T G + V+ + ++ + P + VD GAGDAF GF+ L+
Sbjct: 234 ELGVKAVILTLGEEGVIASDGEEIIRIPAF---SEDAVDVTGAGDAFWSGFICGLLDGYT 290
Query: 312 IEECVRAGCYTSHVIIQRSGCTYP 335
++ ++ G + I+ G P
Sbjct: 291 VKRSIKLGNGVAAFKIRGVGALSP 314
>pdb|3KZH|A Chain A, Crystal Structure Of A Putative Sugar Kinase From
Clostridium Perfringens
pdb|3KZH|B Chain B, Crystal Structure Of A Putative Sugar Kinase From
Clostridium Perfringens
Length = 328
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 114/293 (38%), Gaps = 54/293 (18%)
Query: 61 GGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDES-----A 115
GG +N +A+ ++ T++ +G D+ G+ + ++SK G Y+ D+S
Sbjct: 42 GGVCRN---IAENXARVGVNTNFXSILGNDEHGKSIVEHSKKIG----YHXDDSXVIEGG 94
Query: 116 STGT-CAVCVVGGER-SLVANLSAANCYKSEHLKKPENWALVEKAKYFY-------IAGF 166
ST T A+ GE S +A+ + ++ + + E A+Y I +
Sbjct: 95 STPTYLAILDENGEXVSAIADXKSIGAXNTDFIDSKRE--IFENAEYTVLDSDNPEIXEY 152
Query: 167 FLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTF 226
L D + + +A A ++ KD + P N EA
Sbjct: 153 LLKNFKDKTNFILDPVSAE--------KASWVKHLIKD-FHTIKP-------NRHEAEIL 196
Query: 227 SKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQD---GKLKKFPVIVL 283
+ +TDD+ +K S + I+K I+ AD + GK+K V V
Sbjct: 197 AGFPITDTDDL----IKASNYFLGLGIKK--VFISLDADGIFYNDGVSCGKIKATEVDVK 250
Query: 284 PKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPE 336
+ GAGD+FV G + PIE+ V+ S++ I +P+
Sbjct: 251 ------NVTGAGDSFVAGLGYGYXNKXPIEDIVKFAXTXSNITISHEETIHPD 297
>pdb|2V78|A Chain A, Crystal Structure Of Sulfolobus Solfataricus 2-Keto-3-
Deoxygluconate Kinase
pdb|2V78|B Chain B, Crystal Structure Of Sulfolobus Solfataricus 2-Keto-3-
Deoxygluconate Kinase
pdb|2V78|C Chain C, Crystal Structure Of Sulfolobus Solfataricus 2-Keto-3-
Deoxygluconate Kinase
pdb|2VAR|A Chain A, Crystal Structure Of Sulfolobus Solfataricus 2-Keto-3-
Deoxygluconate Kinase Complexed With 2-Keto-3-
Deoxygluconate
pdb|2VAR|B Chain B, Crystal Structure Of Sulfolobus Solfataricus 2-Keto-3-
Deoxygluconate Kinase Complexed With 2-Keto-3-
Deoxygluconate
pdb|2VAR|C Chain C, Crystal Structure Of Sulfolobus Solfataricus 2-Keto-3-
Deoxygluconate Kinase Complexed With 2-Keto-3-
Deoxygluconate
Length = 313
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 290 DTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSG 331
D GAGDA G F+S +Q K IE + G S ++I G
Sbjct: 252 DPTGAGDAMAGTFVSLYLQGKDIEYSLAHGIAASTLVITVRG 293
>pdb|3IQ0|A Chain A, Crystal Structure Of A Putative Ribokinase Ii In Complex
With Atp And Mg+2 From E.Coli
pdb|3IQ0|B Chain B, Crystal Structure Of A Putative Ribokinase Ii In Complex
With Atp And Mg+2 From E.Coli
pdb|3K9E|A Chain A, Crystal Structure Of A Putative Ribokinase Ii (Apo Form)
From E.Coli
pdb|3K9E|B Chain B, Crystal Structure Of A Putative Ribokinase Ii (Apo Form)
From E.Coli
Length = 330
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 90/235 (38%), Gaps = 37/235 (15%)
Query: 84 IGCIGKDKFGEEMKKNSKLAGVNVHYYED-ESASTGTCAVCVV-GGERSLVANLSAANCY 141
I C+G D FG+ GV++ +TG+ V G+R + N+ A C
Sbjct: 57 ISCVGNDGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDFIFNIKNAACG 116
Query: 142 KSEHLKKPENWALVEKAKYFYIAG--FFLTVSPDSIQLVAEHAAANNKV--FMMNLSAPF 197
K EN +++ +F+I G F D+++ AN V F N+
Sbjct: 117 KLSAQHVDEN--ILKDCTHFHIXGSSLFSFHXVDAVKKAVTIVKANGGVISFDPNIRKEX 174
Query: 198 I-CEFFKDALEKVLPYMDYIFGNETEARTFS-------KVQGWETDDVEEIALKLSQWPK 249
+ +DAL VL D +E E S + G+ + V+E+ +K
Sbjct: 175 LDIPEXRDALHFVLELTDIYXPSEGEVLLLSPHSTPERAIAGFLEEGVKEVIVKRGN--- 231
Query: 250 ASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLS 304
QGA + ++ +PV + VD GAGD F G +++
Sbjct: 232 ------------QGASYYSANEQFHVESYPV------EEVDPTGAGDCFGGAWIA 268
>pdb|3PL2|A Chain A, Crystal Structure Of A 5-Keto-2-Deoxygluconokinase
(Ncgl0155, Cgl0158) From Corynebacterium Glutamicum Atcc
13032 Kitasato At 1.89 A Resolution
pdb|3PL2|B Chain B, Crystal Structure Of A 5-Keto-2-Deoxygluconokinase
(Ncgl0155, Cgl0158) From Corynebacterium Glutamicum Atcc
13032 Kitasato At 1.89 A Resolution
pdb|3PL2|C Chain C, Crystal Structure Of A 5-Keto-2-Deoxygluconokinase
(Ncgl0155, Cgl0158) From Corynebacterium Glutamicum Atcc
13032 Kitasato At 1.89 A Resolution
pdb|3PL2|D Chain D, Crystal Structure Of A 5-Keto-2-Deoxygluconokinase
(Ncgl0155, Cgl0158) From Corynebacterium Glutamicum Atcc
13032 Kitasato At 1.89 A Resolution
Length = 319
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 258 AVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVR 317
A++ QG V + + P + +++ GAGDAF G L+ E P+E+ +R
Sbjct: 230 AIVKQGPKGVXAXTKDETVEVPPFFV---DVINGLGAGDAFGGALCHGLLSEWPLEKVLR 286
Query: 318 AGCYTSHVIIQRSGCT 333
++ R C+
Sbjct: 287 FANTAGALVASRLECS 302
>pdb|3I3Y|A Chain A, Crystal Structure Of Ribokinase In Complex With D-Ribose
From Klebsiella Pneumoniae
pdb|3I3Y|B Chain B, Crystal Structure Of Ribokinase In Complex With D-Ribose
From Klebsiella Pneumoniae
pdb|3I3Y|C Chain C, Crystal Structure Of Ribokinase In Complex With D-Ribose
From Klebsiella Pneumoniae
pdb|3I3Y|D Chain D, Crystal Structure Of Ribokinase In Complex With D-Ribose
From Klebsiella Pneumoniae
pdb|3IKH|A Chain A, Crystal Structure Of Ribokinase In Complex With Atp And
Glycerol In The Active Site From Klebsiella Pneumoniae
pdb|3IKH|B Chain B, Crystal Structure Of Ribokinase In Complex With Atp And
Glycerol In The Active Site From Klebsiella Pneumoniae
pdb|3IKH|C Chain C, Crystal Structure Of Ribokinase In Complex With Atp And
Glycerol In The Active Site From Klebsiella Pneumoniae
pdb|3IKH|D Chain D, Crystal Structure Of Ribokinase In Complex With Atp And
Glycerol In The Active Site From Klebsiella Pneumoniae
Length = 299
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 256 RTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAF 298
+T VITQGA + Q+G+ + P + P + L DT GAGD F
Sbjct: 197 KTLVITQGAAGAWLVQEGQRQFCPAV--PAEAL-DTTGAGDTF 236
>pdb|3LJS|A Chain A, Crystal Structure Of Fructokinase From Xylella Fastidiosa
pdb|3LJS|B Chain B, Crystal Structure Of Fructokinase From Xylella Fastidiosa
pdb|3LKI|A Chain A, Crystal Structure Of Fructokinase With Bound Atp From
Xylella Fastidiosa
pdb|3LKI|B Chain B, Crystal Structure Of Fructokinase With Bound Atp From
Xylella Fastidiosa
Length = 338
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 9/59 (15%)
Query: 254 RKRTAVITQGADPV---VVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE 309
R + ++T A PV G++ F V ++ D+N AGDAFVGG L Q+
Sbjct: 223 RAQLLLVTDAAGPVHWYTRTAGGEVPTFRV------QVQDSNAAGDAFVGGXLYTFAQQ 275
>pdb|3CQD|A Chain A, Structure Of The Tetrameric Inhibited Form Of
Phosphofructokinase-2 From Escherichia Coli
pdb|3CQD|B Chain B, Structure Of The Tetrameric Inhibited Form Of
Phosphofructokinase-2 From Escherichia Coli
pdb|3N1C|A Chain A, Crystal Structure Of The Phosphofructokinase-2 From
Escherichia Coli In Complex With Fructose-6-Phosphate
pdb|3N1C|B Chain B, Crystal Structure Of The Phosphofructokinase-2 From
Escherichia Coli In Complex With Fructose-6-Phosphate
pdb|3N1C|C Chain C, Crystal Structure Of The Phosphofructokinase-2 From
Escherichia Coli In Complex With Fructose-6-Phosphate
pdb|3N1C|D Chain D, Crystal Structure Of The Phosphofructokinase-2 From
Escherichia Coli In Complex With Fructose-6-Phosphate
pdb|3UMO|A Chain A, Crystal Structure Of The Phosphofructokinase-2 From
Escherichia Coli In Complex With Potassium
pdb|3UMO|B Chain B, Crystal Structure Of The Phosphofructokinase-2 From
Escherichia Coli In Complex With Potassium
pdb|3UMP|A Chain A, Crystal Structure Of The Phosphofructokinase-2 From
Escherichia Coli In Complex With Cesium And Atp
pdb|3UMP|B Chain B, Crystal Structure Of The Phosphofructokinase-2 From
Escherichia Coli In Complex With Cesium And Atp
pdb|3UQD|A Chain A, Crystal Structure Of The Phosphofructokinase-2 From
Escherichia Coli In Complex With Substrates And Products
pdb|3UQD|B Chain B, Crystal Structure Of The Phosphofructokinase-2 From
Escherichia Coli In Complex With Substrates And Products
pdb|3UQD|C Chain C, Crystal Structure Of The Phosphofructokinase-2 From
Escherichia Coli In Complex With Substrates And Products
pdb|3UQD|D Chain D, Crystal Structure Of The Phosphofructokinase-2 From
Escherichia Coli In Complex With Substrates And Products
Length = 309
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 281 IVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAG 319
+V P K T GAGD+ VG +L + +EE VR G
Sbjct: 241 VVPPPVKSQSTVGAGDSMVGAMTLKLAENASLEEMVRFG 279
>pdb|2ABQ|A Chain A, Crystal Structure Of Fructose-1-Phosphate Kinase From
Bacillus Halodurans
pdb|2ABQ|B Chain B, Crystal Structure Of Fructose-1-Phosphate Kinase From
Bacillus Halodurans
Length = 306
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 8/65 (12%)
Query: 259 VITQGADPVVV--AQDGKL-----KKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKP 311
+I +G + ++V A DG L F V V P ++ ++ GAGD+ V GFL+ L + K
Sbjct: 206 LIGEGIESILVSFAGDGALFASAEGXFHVNV-PSGEVRNSVGAGDSVVAGFLAALQEGKS 264
Query: 312 IEECV 316
+E+ V
Sbjct: 265 LEDAV 269
>pdb|3UQE|A Chain A, Crystal Structure Of The Phosphofructokinase-2 Mutant Y23d
From Escherichia Coli
pdb|3UQE|B Chain B, Crystal Structure Of The Phosphofructokinase-2 Mutant Y23d
From Escherichia Coli
Length = 309
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 281 IVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAG 319
+V P K T GAGD+ VG +L + +EE VR G
Sbjct: 241 VVPPPVKSQSTVGAGDSMVGAMTLKLAENASLEEMVRFG 279
>pdb|4E69|A Chain A, Crystal Structure Of A Sugar Kinase (Target Efi-502132)
From Oceanicola Granulosus, Unliganded Structure
pdb|4E69|B Chain B, Crystal Structure Of A Sugar Kinase (Target Efi-502132)
From Oceanicola Granulosus, Unliganded Structure
pdb|4EBU|A Chain A, Crystal Structure Of A Sugar Kinase (Target Efi-502312)
From Oceanicola Granulosus, With Bound AmpADP CRYSTAL
FORM I
pdb|4EUM|A Chain A, Crystal Structure Of A Sugar Kinase (Target Efi-502132)
From Oceanicola Granulosus With Bound Amp, Crystal Form
Ii
pdb|4EUM|B Chain B, Crystal Structure Of A Sugar Kinase (Target Efi-502132)
From Oceanicola Granulosus With Bound Amp, Crystal Form
Ii
Length = 328
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 256 RTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEEC 315
R+ V+ G V QDG+ + V V P ++VDT AGD+F G L ++ +P+E
Sbjct: 241 RSVVVKNGPHAVHFLQDGRRGR--VPVPPVAQVVDTTAAGDSFNAGLLDSVLAGQPLETA 298
Query: 316 VRAGCYTSHVIIQRSGC 332
+ A + ++Q G
Sbjct: 299 IAAAAALAGQVVQGKGA 315
>pdb|3PTW|A Chain A, Crystal Structure Of Malonyl Coa-Acyl Carrier Protein
Transacylase From Clostridium Perfringens Atcc 13124
Length = 336
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 15/161 (9%)
Query: 123 CVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKY-----FYIAGFFLTVSPDSIQL 177
V G +VA L E ++K + +VE A Y I+G + + +++
Sbjct: 123 AVAEGIGGMVAVLRMTPEQVDEIIEKSSPYGIVEGANYNSPGQIVISGELVALE-KAMEF 181
Query: 178 VAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQG---WET 234
+ E + + +SAPF C + A EK+ ++ I N+ S V+G E
Sbjct: 182 IKE---VGGRAIKLPVSAPFHCSMLQPAAEKLEDELNKISINKLNGIVMSNVKGEAYLED 238
Query: 235 DDVEEIALKLSQWPKASE-IRKRTAVITQGADPVVVAQDGK 274
D++ I L SQ K I +I G D + GK
Sbjct: 239 DNI--IELLTSQVKKPVLFINDIEKMIESGVDTFIEIGPGK 277
>pdb|2HW5|A Chain A, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|B Chain B, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|C Chain C, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|D Chain D, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|E Chain E, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|F Chain F, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
Length = 286
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 22/128 (17%)
Query: 47 YDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVN 106
+ MAS N EYI + V L P A + + C D +E+ + K+
Sbjct: 20 FQSMASGANFEYIIAEKRGKNNTVGLIQLNRPKALNAL-C---DGLIDELNQALKI---- 71
Query: 107 VHYYEDESASTGTCAVCVVGGERSLVA--------NLSAANCYKSEHLKKPENWALVEKA 158
+E++ A A+ + GG+++ A NLS +CY S+ LK ++ V+K
Sbjct: 72 ---FEEDPA---VGAIVLTGGDKAFAAGADIKEMQNLSFQDCYSSKFLKHWDHLTQVKKP 125
Query: 159 KYFYIAGF 166
+ G+
Sbjct: 126 VIAAVNGY 133
>pdb|4GM6|A Chain A, Crystal Structure Of Pfkb Family Carbohydrate
Kinase(Target Efi-502146 From Listeria Grayi Dsm 20601
pdb|4GM6|B Chain B, Crystal Structure Of Pfkb Family Carbohydrate
Kinase(Target Efi-502146 From Listeria Grayi Dsm 20601
pdb|4GM6|C Chain C, Crystal Structure Of Pfkb Family Carbohydrate
Kinase(Target Efi-502146 From Listeria Grayi Dsm 20601
pdb|4GM6|D Chain D, Crystal Structure Of Pfkb Family Carbohydrate
Kinase(Target Efi-502146 From Listeria Grayi Dsm 20601
pdb|4GM6|E Chain E, Crystal Structure Of Pfkb Family Carbohydrate
Kinase(Target Efi-502146 From Listeria Grayi Dsm 20601
pdb|4GM6|F Chain F, Crystal Structure Of Pfkb Family Carbohydrate
Kinase(Target Efi-502146 From Listeria Grayi Dsm 20601
Length = 351
Score = 28.1 bits (61), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 77/186 (41%), Gaps = 25/186 (13%)
Query: 148 KPENWALVEKAK---YFYIAGFFLTVSPDSIQLVAE--HAAANNKV---FMMNLSAPFI- 198
K +W L E K +++G + +S +++V + A N + F MN A
Sbjct: 138 KSMDWDLSELLKGIRVLHVSGITIALSTFWLEMVVKIIREAKRNGIKISFDMNYRAKLWE 197
Query: 199 CEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEI--RKR 256
E K A +++LP +DY + +A F ++ TD + + K +P KR
Sbjct: 198 LEAAKRAYQQLLPLVDYCSAGQMDAVAFFEISSETTDYYQAMHDK---YPNIELFYATKR 254
Query: 257 TAV-----ITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKP 311
T + + QG + Q + + P +VD G GDA+ L ++ E
Sbjct: 255 TVISASHHLLQGH---LWTQGECWESEEYAIYP---IVDRVGGGDAYTAAVLHGILSEWR 308
Query: 312 IEECVR 317
+E V+
Sbjct: 309 PDETVK 314
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,585,184
Number of Sequences: 62578
Number of extensions: 433366
Number of successful extensions: 1393
Number of sequences better than 100.0: 52
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1303
Number of HSP's gapped (non-prelim): 59
length of query: 341
length of database: 14,973,337
effective HSP length: 100
effective length of query: 241
effective length of database: 8,715,537
effective search space: 2100444417
effective search space used: 2100444417
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)