Query 019448
Match_columns 341
No_of_seqs 141 out of 1632
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 16:14:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019448.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019448hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3otx_A Adenosine kinase, putat 100.0 3.4E-58 1.1E-62 421.2 36.9 339 3-341 6-346 (347)
2 3loo_A Anopheles gambiae adeno 100.0 4.2E-58 1.4E-62 423.0 34.4 338 4-341 23-362 (365)
3 3vas_A Putative adenosine kina 100.0 2.9E-58 9.9E-63 424.5 33.3 339 3-341 23-365 (370)
4 3uq6_A Adenosine kinase, putat 100.0 3.2E-56 1.1E-60 411.4 34.2 338 4-341 26-367 (372)
5 1bx4_A Protein (adenosine kina 100.0 4.1E-53 1.4E-57 387.2 36.5 339 3-341 5-345 (345)
6 2abs_A Adenosine kinase, AK; r 100.0 1.7E-50 5.6E-55 374.8 34.2 330 1-335 29-377 (383)
7 4e3a_A Sugar kinase protein; s 100.0 7.1E-50 2.4E-54 366.2 32.4 311 2-336 23-340 (352)
8 3ry7_A Ribokinase; transferase 100.0 3.1E-49 1.1E-53 355.3 19.6 293 5-340 3-301 (304)
9 1rkd_A Ribokinase; carbohydrat 100.0 3.5E-48 1.2E-52 349.3 20.8 297 1-340 1-301 (309)
10 2fv7_A Ribokinase; structural 100.0 1.7E-47 5.7E-52 347.9 20.9 298 1-340 21-326 (331)
11 3lhx_A Ketodeoxygluconokinase; 100.0 5.6E-47 1.9E-51 342.8 23.9 290 1-338 1-308 (319)
12 4du5_A PFKB; structural genomi 100.0 9.6E-47 3.3E-51 343.6 25.5 294 1-340 23-331 (336)
13 3ljs_A Fructokinase; fructokia 100.0 2.3E-47 8E-52 348.1 19.2 296 1-340 1-322 (338)
14 2rbc_A Sugar kinase, AGR_C_456 100.0 1E-46 3.4E-51 344.0 23.0 286 4-340 29-322 (343)
15 3iq0_A Putative ribokinase II; 100.0 5.5E-47 1.9E-51 344.4 20.3 295 1-340 1-306 (330)
16 3ktn_A Carbohydrate kinase, PF 100.0 1E-46 3.4E-51 345.0 21.1 296 5-340 3-325 (346)
17 3kzh_A Probable sugar kinase; 100.0 1.1E-46 3.9E-51 342.1 21.0 291 1-335 3-296 (328)
18 3go6_A Ribokinase RBSK; phosph 100.0 5.9E-47 2E-51 341.0 18.9 276 1-340 16-298 (310)
19 3hj6_A Fructokinase, FRK; fruc 100.0 7.1E-47 2.4E-51 343.3 18.7 294 3-341 20-322 (327)
20 3pl2_A Sugar kinase, ribokinas 100.0 1.1E-45 3.7E-50 334.4 26.0 294 1-340 5-311 (319)
21 3ikh_A Carbohydrate kinase; tr 100.0 3.8E-47 1.3E-51 340.7 15.8 276 4-340 2-282 (299)
22 4e69_A 2-dehydro-3-deoxyglucon 100.0 3.8E-45 1.3E-49 331.8 27.9 288 2-337 21-320 (328)
23 3h49_A Ribokinase; transferase 100.0 1.4E-45 4.8E-50 334.4 24.8 299 1-340 1-308 (325)
24 2c4e_A Sugar kinase MJ0406; tr 100.0 7.8E-46 2.7E-50 332.8 20.3 286 1-339 1-292 (302)
25 2qcv_A Putative 5-dehydro-2-de 100.0 2E-44 6.7E-49 328.0 29.5 297 1-339 8-318 (332)
26 2nwh_A AGR_C_3442P, carbohydra 100.0 2.1E-45 7E-50 332.3 21.4 292 5-339 4-300 (317)
27 3umo_A 6-phosphofructokinase i 100.0 6.5E-45 2.2E-49 327.9 23.1 293 3-340 1-300 (309)
28 1vm7_A Ribokinase; TM0960, str 100.0 4.5E-45 1.5E-49 329.0 21.5 287 3-340 13-304 (311)
29 2v78_A Fructokinase; transfera 100.0 6.5E-45 2.2E-49 328.5 20.1 284 6-339 3-303 (313)
30 2f02_A Tagatose-6-phosphate ki 100.0 1.9E-44 6.6E-49 326.7 22.7 291 5-340 3-301 (323)
31 2jg1_A Tagatose-6-phosphate ki 100.0 2.3E-44 7.9E-49 327.0 23.0 290 6-340 22-318 (330)
32 2dcn_A Hypothetical fructokina 100.0 2.1E-44 7.3E-49 324.8 20.3 284 5-339 2-301 (311)
33 1tyy_A Putative sugar kinase; 100.0 7.4E-45 2.5E-49 331.4 17.3 285 1-339 21-322 (339)
34 1v1a_A 2-keto-3-deoxygluconate 100.0 6.2E-44 2.1E-48 321.5 22.8 281 6-339 3-296 (309)
35 3cqd_A 6-phosphofructokinase i 100.0 5.4E-44 1.8E-48 321.9 21.9 288 7-340 4-300 (309)
36 4gm6_A PFKB family carbohydrat 100.0 4.5E-44 1.5E-48 328.0 21.8 296 2-333 22-330 (351)
37 3ie7_A LIN2199 protein; phosph 100.0 5E-44 1.7E-48 323.7 21.5 287 5-340 3-297 (320)
38 4e84_A D-beta-D-heptose 7-phos 100.0 1.2E-44 4.1E-49 331.2 17.3 294 3-340 52-350 (352)
39 2ajr_A Sugar kinase, PFKB fami 100.0 2.3E-44 7.9E-49 327.2 16.1 290 5-340 13-318 (331)
40 2hlz_A Ketohexokinase; non-pro 100.0 3.7E-43 1.3E-47 316.7 23.7 281 3-332 16-308 (312)
41 3ewm_A Uncharacterized sugar k 100.0 2.4E-43 8.3E-48 318.2 22.0 281 5-340 2-294 (313)
42 2abq_A Fructose 1-phosphate ki 100.0 1E-42 3.5E-47 313.1 21.2 286 6-339 2-290 (306)
43 3b1n_A Ribokinase, putative; r 100.0 1.8E-42 6.1E-47 314.0 22.3 292 6-339 2-298 (326)
44 2pkf_A Adenosine kinase; trans 100.0 1.4E-42 4.8E-47 315.8 21.4 297 5-339 11-312 (334)
45 3kd6_A Carbohydrate kinase, PF 100.0 7.6E-42 2.6E-46 308.3 26.0 276 5-340 3-291 (313)
46 2jg5_A Fructose 1-phosphate ki 100.0 1.3E-42 4.5E-47 312.4 20.8 285 6-340 2-291 (306)
47 2qhp_A Fructokinase; NP_810670 100.0 3.5E-42 1.2E-46 308.2 22.3 277 5-338 4-289 (296)
48 2afb_A 2-keto-3-deoxygluconate 100.0 5.6E-42 1.9E-46 314.1 23.0 295 5-339 13-336 (351)
49 3bf5_A Ribokinase related prot 100.0 1.6E-42 5.4E-47 311.5 15.6 270 3-339 19-293 (306)
50 1vk4_A PFKB carbohydrate kinas 100.0 3.4E-38 1.2E-42 282.4 19.2 257 52-340 27-292 (298)
51 2yxt_A Pyridoxal kinase; beta 99.9 1E-25 3.5E-30 202.7 9.4 222 80-329 12-269 (312)
52 2ddm_A Pyridoxine kinase; pyri 99.9 2.3E-24 7.9E-29 191.2 13.3 227 79-332 21-269 (283)
53 1jxh_A Phosphomethylpyrimidine 99.9 2E-23 7E-28 185.4 12.4 161 158-330 95-269 (288)
54 1ub0_A THID, phosphomethylpyri 99.9 5.2E-22 1.8E-26 173.6 15.1 162 157-330 70-244 (258)
55 2i5b_A Phosphomethylpyrimidine 99.8 5.7E-20 1.9E-24 161.8 14.6 162 157-330 74-250 (271)
56 3pzs_A PM kinase, pyridoxamine 99.8 7.5E-20 2.6E-24 162.4 13.0 167 155-329 75-259 (289)
57 3h74_A Pyridoxal kinase; PSI-I 99.8 6.5E-19 2.2E-23 155.4 16.9 161 157-330 74-249 (282)
58 3mbh_A Putative phosphomethylp 99.8 1.6E-18 5.5E-23 153.7 13.6 163 157-329 77-258 (291)
59 3zs7_A Pyridoxal kinase; trans 99.8 2.1E-18 7.2E-23 153.5 13.1 163 156-329 75-261 (300)
60 1ekq_A Hydroxyethylthiazole ki 99.7 9.5E-16 3.3E-20 134.4 13.4 165 153-328 54-234 (272)
61 3rm5_A Hydroxymethylpyrimidine 99.6 1.1E-14 3.6E-19 139.9 12.6 159 157-328 91-274 (550)
62 1v8a_A Hydroxyethylthiazole ki 99.3 6.2E-11 2.1E-15 103.2 13.9 159 151-323 50-221 (265)
63 3bgk_A SMU.573, putative uncha 99.0 2E-09 6.8E-14 95.6 10.8 156 153-328 121-284 (311)
64 2r3b_A YJEF-related protein; p 99.0 1.5E-09 5.1E-14 96.3 9.9 154 153-327 107-266 (310)
65 3dzv_A 4-methyl-5-(beta-hydrox 98.9 3.9E-08 1.3E-12 85.2 15.3 161 151-322 52-229 (273)
66 3drw_A ADP-specific phosphofru 98.9 5.8E-07 2E-11 83.0 23.7 214 6-231 29-321 (474)
67 3rss_A Putative uncharacterize 98.8 3.6E-08 1.2E-12 92.9 11.9 157 153-326 316-473 (502)
68 3rpz_A ADP/ATP-dependent NAD(P 98.7 8.5E-08 2.9E-12 83.6 10.1 155 155-331 96-258 (279)
69 1gc5_A ADP-dependent glucokina 98.4 2.3E-05 7.9E-10 72.5 19.1 209 5-229 31-315 (467)
70 1l2l_A ADP-dependent glucokina 98.4 8.7E-06 3E-10 75.2 16.2 209 5-229 26-305 (457)
71 1ua4_A Glucokinase, ADP-depend 98.4 2.3E-05 7.9E-10 72.5 18.8 163 58-230 108-303 (455)
72 3nl6_A Thiamine biosynthetic b 98.3 2.3E-05 7.9E-10 74.5 16.9 159 152-321 300-494 (540)
73 3hpd_A Hydroxyethylthiazole ki 98.2 3.2E-05 1.1E-09 66.4 13.3 158 152-321 51-219 (265)
74 3k5w_A Carbohydrate kinase; 11 97.3 0.00077 2.6E-08 62.9 9.6 147 156-324 291-443 (475)
75 2l82_A Designed protein OR32; 64.5 33 0.0011 24.3 7.1 68 151-222 71-139 (162)
76 2fcj_A Small toprim domain pro 55.7 24 0.00083 25.8 5.4 78 157-246 26-103 (119)
77 3vzx_A Heptaprenylglyceryl pho 48.8 35 0.0012 28.1 6.0 51 156-217 30-80 (228)
78 3can_A Pyruvate-formate lyase- 45.5 1E+02 0.0035 23.7 8.3 66 159-228 5-75 (182)
79 3hl2_A O-phosphoseryl-tRNA(SEC 38.5 2.1E+02 0.0073 26.4 10.0 113 56-194 137-254 (501)
80 2orv_A Thymidine kinase; TP4A 36.9 1E+02 0.0035 25.4 7.0 62 153-217 86-147 (234)
81 3w01_A Heptaprenylglyceryl pho 33.7 57 0.0019 27.0 4.9 51 156-217 35-85 (235)
82 1ztd_A Hypothetical protein PF 31.6 42 0.0014 23.9 3.2 31 289-319 64-95 (133)
83 2j9r_A Thymidine kinase; TK1, 29.6 91 0.0031 25.3 5.5 54 157-217 101-159 (214)
84 3tfo_A Putative 3-oxoacyl-(acy 26.8 1.4E+02 0.0049 24.6 6.5 45 61-110 14-58 (264)
85 3jzl_A Putative cystathionine 26.7 1.4E+02 0.0048 26.7 6.9 38 157-194 159-203 (409)
86 3osu_A 3-oxoacyl-[acyl-carrier 26.1 1.4E+02 0.0048 24.1 6.3 45 61-109 14-58 (246)
87 3vk5_A MOEO5; TIM barrel, tran 24.4 1.1E+02 0.0036 26.1 5.0 50 156-217 65-121 (286)
88 2fq6_A Cystathionine beta-lyas 23.4 2.2E+02 0.0075 25.4 7.5 38 157-194 167-207 (415)
89 4e5s_A MCCFLIKE protein (BA_56 23.2 1.8E+02 0.0062 25.2 6.6 80 155-267 9-91 (331)
90 1i4n_A Indole-3-glycerol phosp 23.0 1.7E+02 0.006 24.2 6.2 62 153-223 119-182 (251)
91 1zl0_A Hypothetical protein PA 22.6 2E+02 0.0069 24.7 6.7 40 155-194 14-53 (311)
92 3iwt_A 178AA long hypothetical 20.3 94 0.0032 24.0 3.8 19 90-108 39-57 (178)
93 1tqx_A D-ribulose-5-phosphate 20.0 2.5E+02 0.0086 22.8 6.5 51 158-217 86-143 (227)
94 3v7e_A Ribosome-associated pro 20.0 2E+02 0.0067 19.0 4.9 36 156-194 26-61 (82)
No 1
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=100.00 E-value=3.4e-58 Score=421.23 Aligned_cols=339 Identities=40% Similarity=0.716 Sum_probs=301.5
Q ss_pred CCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcC-CCc-
Q 019448 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQI-PGA- 80 (341)
Q Consensus 3 ~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~l-g~~- 80 (341)
+..+|+++|++++|++..++++||++|++++|+.++.++.++|..++..+.......+||++.|+|+++++|+++ |.+
T Consensus 6 ~~~~v~~iG~~~lD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~~~~~~~~~~~~~GG~~~N~a~~la~L~~~~G~~~ 85 (347)
T 3otx_A 6 APLRVYVQCNPLLDVSAHVSDEFLVKYGLERGTAILLSERQKGIFDDIEKMPNVRYVPGGSGLNVARVAQWMQQAYKGKF 85 (347)
T ss_dssp CCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGTTHHHHHHTSTTCEEEECCHHHHHHHHHHHTTGGGTTSS
T ss_pred CCCcEEEECCceeeEEEecCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEecCCHHHHHHHHHHHhcccCCCCe
Confidence 566899999999999999999999999999999999999999999999999999999999999999999984322 688
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccceE
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKY 160 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 160 (341)
+.++|.+|+|.+|+.+++.|++.||+++++...+.+|+.+++++++|+|+++.+.++...++++++.....+..++++++
T Consensus 86 ~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~T~~~~i~~~~g~r~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~ 165 (347)
T 3otx_A 86 VTYVGCIADDRYGKVLKEAAEHEGIVMAVEHTTKAGSGACAVCITGKERTLVADLGAANHLSSEHMRSPAVVRAMDESRI 165 (347)
T ss_dssp EEEECEECSSHHHHHHHHHHHHHTCEECCEECSSSCEEEEEEEEETTEEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSE
T ss_pred EEEEEEecCChHHHHHHHHHHHCCCceecccCCCCCCeEEEEEEECCceeeeechhhhhcCCHHHcCchhhHHHHhhCCE
Confidence 99999999999999999999999999999876777899998888889999988888888899888875434567899999
Q ss_pred EEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHH
Q 019448 161 FYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 240 (341)
Q Consensus 161 v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~ 240 (341)
+|++++.+..+++.+.++++.++++++++++|++.+.|...+++.+.++++++|++++|++|++.|++..+.+.++++++
T Consensus 166 ~~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~~~dil~~N~~Ea~~l~~~~~~~~~~~~~~ 245 (347)
T 3otx_A 166 FYFSGFTLTVDVNHVLQACRKAREVDGLFMINLSAPFIMQFFSAQLGEVLPYTDIIVANRHEAKEFANMMKWDTDCVEEI 245 (347)
T ss_dssp EEEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHHTCCCCCHHHH
T ss_pred EEEeeeecccCHHHHHHHHHHHHHhCCEEEeeCchhhhHHHHHHHHHHHHhhCCEEecCHHHHHHHhcccCCCcCCHHHH
Confidence 99999887788999999999999999999999998877777778899999999999999999999998776667889999
Q ss_pred HHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHH
Q 019448 241 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGC 320 (341)
Q Consensus 241 ~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~ 320 (341)
++++.++++....+++.||||+|++|++++++++.+++|+++++..+++|||||||+|+|||+++|++|+++++|+++|+
T Consensus 246 ~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~l~~a~~~a~ 325 (347)
T 3otx_A 246 ARRAVSEVPYTGTKGRVVVFTRDIESTVLATKDGVETVPVPQLDQDKVIDMNGAGDAFMGGFLSAYAVGKDLRRCCETGH 325 (347)
T ss_dssp HHHHHHTSCCCCSSCCEEEEEETTEEEEEEETTEEEEECCCCCCGGGCCSSCCSHHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHhhhccccCCCCEEEEEeCCCCeEEEECCeEEEEEecccCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 99985432111468899999999999999999988888887665558899999999999999999999999999999999
Q ss_pred HHhhhhhhhccccCCCCCCCC
Q 019448 321 YTSHVIIQRSGCTYPEKPEFN 341 (341)
Q Consensus 321 ~~Aa~~v~~~g~~~p~~~~~~ 341 (341)
++|+++|++.|+.+|++++|+
T Consensus 326 ~~aa~~v~~~G~~~p~~~~~~ 346 (347)
T 3otx_A 326 YTAQEVIQRDGCSFPEKPSFS 346 (347)
T ss_dssp HHHHHHHTCC----CCSCSCC
T ss_pred HHHHHHHcccCCCCCCCCCCC
Confidence 999999999999999998874
No 2
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=100.00 E-value=4.2e-58 Score=423.02 Aligned_cols=338 Identities=51% Similarity=0.920 Sum_probs=299.3
Q ss_pred CceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEE
Q 019448 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~ 83 (341)
+.+|+++|++++|++..++++||++|++++|+.++.++.++|..++..+.......+||++.|+|+++++|.++|.++.+
T Consensus 23 ~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~e~~~~~~~~~~~GG~~~N~a~~~~~L~~lG~~~~~ 102 (365)
T 3loo_A 23 DGMLVGLGNPLLDISAVVEKDLLNKYDMQPNNAILAEEKHMPMYQELIEKYQAEYIAGGSVQNSLRVAQWILQRPRTAIF 102 (365)
T ss_dssp TTSEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGTHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHTCTTSEEE
T ss_pred CccEEEECCCeEeEEEecCHHHHHHcCCCCCCceechhHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhhcCCCcEEE
Confidence 45899999999999999999999999999999999998999999999998889999999999999999997777899999
Q ss_pred EeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccceEEEE
Q 019448 84 IGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYI 163 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~i 163 (341)
+|.+|+|.+|+.+++.|++.||+++++...+.+|+.+++++++++|+++.+.++...++++++.....+..+.+++++|+
T Consensus 103 ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~Tg~~~i~~~~~~r~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~v~i 182 (365)
T 3loo_A 103 FGCVGQDEYARILEERATSNGVNVQYQRSATSPTGTCAVLVTGTQRSLCANLAAANDFTPEHLRSDGNRAYLQGAQFFYV 182 (365)
T ss_dssp EEEEESBHHHHHHHHHHHHHTCEEEEEEESSSCCEEEEEEEETTEEEEEEECGGGGGCCGGGGGSHHHHHHHHHCSEEEE
T ss_pred EEEecCCchHHHHHHHHHHCCCceeccccCCCCCeEEEEEEECCceEEEeccchHhhCCHhHcCchhhHHHHhhCCEEEE
Confidence 99999999999999999999999999876777899998888888898888888888999998875444567889999999
Q ss_pred eccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHHH
Q 019448 164 AGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALK 243 (341)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~~ 243 (341)
+++.+..+++.+..+++.++++++++++|++.+.|....++.+.++++++|++++|++|++.|++..+++.+++++++++
T Consensus 183 ~G~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~ 262 (365)
T 3loo_A 183 SGFFFTVSFESALSVAKEAAATGRMFMMNLSAPFVPQFYKNNLEEIFPYVDVLFGNETEAIALAKEFNYGTEDLREIGKR 262 (365)
T ss_dssp EGGGHHHHHHHHHHHHHHHHHTTCEEEEECCSTHHHHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCCCCHHHHHHH
T ss_pred eeeeccCCHHHHHHHHHHHHHcCCEEEEECCchhhhHHHHHHHHHHHHhCCEEecCHHHHHHHhcccCCCCCCHHHHHHH
Confidence 99887777889999999999999999999988877777788899999999999999999999998877777899999999
Q ss_pred HhcCCccccCCccEEEEEeCCCceEEE--ECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHH
Q 019448 244 LSQWPKASEIRKRTAVITQGADPVVVA--QDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCY 321 (341)
Q Consensus 244 l~~~~~~~~~~~~~vvvt~G~~G~~~~--~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~ 321 (341)
+.++.+....+++.+|||+|++|++++ ++++.+++|+++++..+++|||||||+|+|||+++|++|+++++|+++|++
T Consensus 263 l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~agfl~~l~~g~~l~~a~~~a~~ 342 (365)
T 3loo_A 263 IAALPKENGKRKRIVIITQGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAFVGGFLAQLLQSRTVDVCIKCGIW 342 (365)
T ss_dssp HHTSCCSSTTSCCEEEEEETTEEEEEEETTCSCCEEECCCCCC------CTTHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHhhhhhccCCCCEEEEEeCCCCEEEEEecCCeEEEEeccccCCCCccCCCChHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 854321112478999999999999999 777888888876644589999999999999999999999999999999999
Q ss_pred HhhhhhhhccccCCCCCCCC
Q 019448 322 TSHVIIQRSGCTYPEKPEFN 341 (341)
Q Consensus 322 ~Aa~~v~~~g~~~p~~~~~~ 341 (341)
+|+++|++.|+.+|.+++|+
T Consensus 343 ~Aa~~v~~~G~~~p~~~~~~ 362 (365)
T 3loo_A 343 AAREIIQRSGCTFEGEPSFC 362 (365)
T ss_dssp HHHHHHHHGGGGGGSCCCC-
T ss_pred HHHHHHcCCCCCCCCCccCC
Confidence 99999999999999999874
No 3
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=100.00 E-value=2.9e-58 Score=424.55 Aligned_cols=339 Identities=38% Similarity=0.680 Sum_probs=304.6
Q ss_pred CCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEE
Q 019448 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATS 82 (341)
Q Consensus 3 ~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~ 82 (341)
|+.+|+++|++++|++..++++||++|++++|+..+.+++++|.+++..+..+....+||+++|+|+++++|+++|.++.
T Consensus 23 ~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~P~~ge~~~~~~~~~~~GG~~~N~A~~la~L~~~G~~~~ 102 (370)
T 3vas_A 23 SEGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCS 102 (370)
T ss_dssp CTTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTHHHHHHTTSSSCEEEEECHHHHHHHHHHHHHCCTTCEE
T ss_pred CCccEEEECCcceeEEEecCHHHHHHcCCCCCceEEccHHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhcCCCCcEE
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999655579999
Q ss_pred EEeeeecCchhHHHHHHHHhcCcceeeeec-CCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccceEE
Q 019448 83 YIGCIGKDKFGEEMKKNSKLAGVNVHYYED-ESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYF 161 (341)
Q Consensus 83 ~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~-~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 161 (341)
|+|.+|+|.+|+.+++.|++.||+++++.. .+.+|+.+++++++|+|+++.+.+++..++++++........+.+++++
T Consensus 103 ~ig~vG~D~~G~~~~~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~~g~rt~~~~~ga~~~l~~~~~~~~~~~~~~~~~~~v 182 (370)
T 3vas_A 103 YVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVSEKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKAQVY 182 (370)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEECSSCEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSEE
T ss_pred EEEEEcCChhHHHHHHHHHHcCCcccccccCCCCCceEEEEEEeCCceeEEEccchhhhCCHHHcCchhhHHHHhhCCEE
Confidence 999999999999999999999999999876 6778999988888889999888888889999888753345678999999
Q ss_pred EEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHH
Q 019448 162 YIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIA 241 (341)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~ 241 (341)
|++++.+..+++.+..+++.++++++++++|++.+.|....++.+.++++++|++++|++|++.|++....+.+++++++
T Consensus 183 ~~~g~~~~~~~~~~~~~~~~a~~~g~~v~ld~~~~~~~~~~~~~l~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~ 262 (370)
T 3vas_A 183 YIAGFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLEDTVHATA 262 (370)
T ss_dssp EEEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCCSSHHHHHH
T ss_pred EEEeeeccCCHHHHHHHHHHHHHcCCEEEEECCcHHHHHHHHHHHHHHHhhCCEEEcCHHHHHHHhcccCCCccCHHHHH
Confidence 99998877778899999999999999999999988887777788899999999999999999999987666667889999
Q ss_pred HHHhcCCccccC-CccEEEEEeCCCceEEEE--CCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHH
Q 019448 242 LKLSQWPKASEI-RKRTAVITQGADPVVVAQ--DGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRA 318 (341)
Q Consensus 242 ~~l~~~~~~~~~-~~~~vvvt~G~~G~~~~~--~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~ 318 (341)
+++.++++.... +++.||||+|++|+++++ +++.+++|+++++..+++|||||||+|+|||+++|++|+++++|+++
T Consensus 263 ~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ag~l~~l~~g~~l~~a~~~ 342 (370)
T 3vas_A 263 RYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKPMITSLHA 342 (370)
T ss_dssp HHHHHSCCTTCCCCCCEEEEEETTEEEEEEETTCSSCEEECCCCCCTTTCSCCTTHHHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred HHHHhhcccccccCCCEEEEecCCCceEEEEcCCCeEEEEecccccCCCcCCCCChHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 998432110113 789999999999999998 78888999887655589999999999999999999999999999999
Q ss_pred HHHHhhhhhhhccccCCCCCCCC
Q 019448 319 GCYTSHVIIQRSGCTYPEKPEFN 341 (341)
Q Consensus 319 a~~~Aa~~v~~~g~~~p~~~~~~ 341 (341)
|+++|+++|++.|+.+|+.++|+
T Consensus 343 A~aaAa~~v~~~G~~~p~~~~~~ 365 (370)
T 3vas_A 343 AVKAAAYIICRSGFSLGSRDSYS 365 (370)
T ss_dssp HHHHHHHHHTSSSSCCCCGGGGC
T ss_pred HHHHHHHHHcccCCcCCCCccce
Confidence 99999999999999999998864
No 4
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=100.00 E-value=3.2e-56 Score=411.36 Aligned_cols=338 Identities=38% Similarity=0.679 Sum_probs=299.2
Q ss_pred CceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEE
Q 019448 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~ 83 (341)
+..|++||++++|++..+|++||.+|++++|+.++.++++.+..++..........+||+++|+|+++++|.+.+..+.|
T Consensus 26 ~~~v~giGnalvDi~~~v~d~~l~~~~l~kg~m~l~~~~~~~~~~~~~~~~~~~~~~GGsa~N~a~~la~LG~~~~~~~f 105 (372)
T 3uq6_A 26 EGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCSY 105 (372)
T ss_dssp TTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTTHHHHHHTSSSCEEEECCHHHHHHHHHHHHHCSTTSEEE
T ss_pred CCeEEEECCceeeEEEEeCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEeCCcHHHHHHHHHHHcCCCCCcEEE
Confidence 44699999999999999999999999999999999999999999999998889999999999999999997655567999
Q ss_pred EeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccceEEE
Q 019448 84 IGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFY 162 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 162 (341)
+|.||+|.+|+++++.|++.||+++++. ..+.+|+.+++++++++|+++.+.++...+++++++.+..+..++.++++|
T Consensus 106 iG~VG~D~~G~~l~~~L~~~GV~~~~~~~~~~~~T~~~~v~~~dgert~~~~~ga~~~l~~~~i~~~~~~~~i~~a~~~~ 185 (372)
T 3uq6_A 106 VGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVSEKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKAQVYY 185 (372)
T ss_dssp EEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEECSSCEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSEEE
T ss_pred EeeecCCHHHHHHHHHHHHcCCCceeeeecCCCCceEEEEEcCCCceEEEEeccchhhcchhhhhhhhHHHHhhcccEEE
Confidence 9999999999999999999999999875 455678888888889999999999999999999998766677899999999
Q ss_pred EeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHH
Q 019448 163 IAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIAL 242 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~ 242 (341)
++++.+..+++.+.++++.+++++.++.+|++.+.+....++.+.++++++|++++|++|++.|++......++.+++++
T Consensus 186 ~~g~~~~~~~~~~~~~~~~a~~~g~~v~ldls~~~~~~~~~~~l~~ll~~~Dil~~Ne~Ea~~l~~~~~~~~~~~~~~a~ 265 (372)
T 3uq6_A 186 IAGFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLEDTVHATAR 265 (372)
T ss_dssp EEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCCSSHHHHHHH
T ss_pred EecccccccHHHHHHHHHHHHHcCCeEeeccccchhhhhhHHHHHHHhhcCCcccCCHHHHHHHhCCCCCchhHHHHHHH
Confidence 99987766778899999999999999999999887777788889999999999999999999999987777778888888
Q ss_pred HHhcCCc-cccCCccEEEEEeCCCceEEEECCe--eEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHH
Q 019448 243 KLSQWPK-ASEIRKRTAVITQGADPVVVAQDGK--LKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAG 319 (341)
Q Consensus 243 ~l~~~~~-~~~~~~~~vvvt~G~~G~~~~~~~~--~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a 319 (341)
.+.++.. ....+.+.+|||+|++|++++++++ ...++.++.+..++||||||||+|+|||+++|++|+++++|+++|
T Consensus 266 ~l~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~v~~~~~~~vVDTtGAGDaF~agfl~~l~~g~~l~~a~~~a 345 (372)
T 3uq6_A 266 YIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKPMITSLHAA 345 (372)
T ss_dssp HHHHSCCTTCCCCCCEEEEEETTEEEEEEESSCSSCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred HHhhhhhhhhcCCceEEEEcCCCCceEEecCCCceeeeeeccCCCCCceeCCCchHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 8865432 1235678999999999999987653 344454444556899999999999999999999999999999999
Q ss_pred HHHhhhhhhhccccCCCCCCCC
Q 019448 320 CYTSHVIIQRSGCTYPEKPEFN 341 (341)
Q Consensus 320 ~~~Aa~~v~~~g~~~p~~~~~~ 341 (341)
+++|+.+|++.|+++|..++++
T Consensus 346 ~~aAa~vv~~~Ga~lp~r~~~~ 367 (372)
T 3uq6_A 346 VKAAAYIICRSGFSLGSRDSYS 367 (372)
T ss_dssp HHHHHHHHTSSSSCCCCGGGCC
T ss_pred HHHHHHHHcCCCCCCCChhHHH
Confidence 9999999999999999988864
No 5
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=100.00 E-value=4.1e-53 Score=387.22 Aligned_cols=339 Identities=58% Similarity=1.032 Sum_probs=294.5
Q ss_pred CCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCC-CcE
Q 019448 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIP-GAT 81 (341)
Q Consensus 3 ~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg-~~v 81 (341)
++++|+|+|++++|++..++++++.+|++++|+..+.+..+.|..++..+..+....+||+++|+|+++++|.+.+ .++
T Consensus 5 ~~~~v~viG~~~~D~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~lgg~~~~~~ 84 (345)
T 1bx4_A 5 RENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAA 84 (345)
T ss_dssp CTTCEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGHHHHHHHHHHSCCEEEEECHHHHHHHHHHHHHCSSTTCE
T ss_pred ccccEEEECCcceeEEEecCHHHHHHcCCCCCcEEEchHHHHHHHHHHhccCCceecCCcHHHHHHHHHHHhcCCCCCcE
Confidence 3568999999999999999999999999999999998877899999999999999999999999999999853222 899
Q ss_pred EEEeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecccccccCCcc-cCCCcchhhhhccceE
Q 019448 82 SYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSE-HLKKPENWALVEKAKY 160 (341)
Q Consensus 82 ~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~ 160 (341)
.|+|.+|+|.+|+.+++.|++.||+++++...+.+|+.+++++++|+|+++.+.+++..++++ ++........+.++++
T Consensus 85 ~~ig~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~T~~~~~~~~~g~r~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 164 (345)
T 1bx4_A 85 TFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARV 164 (345)
T ss_dssp EEEEEEESSHHHHHHHHHHHHTTCEEEEEEESSSCCCEEEEEEETTEEEEEEECGGGGGCCGGGTTTSHHHHHHHHHCSE
T ss_pred EEEEEeCCChhHHHHHHHHHHcCCceeeeecCCCCCceEEEEEcCCceEeeeccchHhhcCcccccCcHHHHHHHhhCCE
Confidence 999999999999999999999999999987666789999888888888887777877788888 7764333456789999
Q ss_pred EEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHH
Q 019448 161 FYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 240 (341)
Q Consensus 161 v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~ 240 (341)
+|++++.+..+++.+..+++.++++++++++|++.+.|.....+.++++++++|++++|++|++.|++....+.++++++
T Consensus 165 v~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~ 244 (345)
T 1bx4_A 165 CYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEI 244 (345)
T ss_dssp EEEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCSHHHHHHTHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCCCCHHHH
T ss_pred EEEEEEeccCCHHHHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHHHHHHhccCCEEeCCHHHHHHHhcccCCCCCCHHHH
Confidence 99999887778899999999999999999999987777655666788899999999999999999988655556789999
Q ss_pred HHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHH
Q 019448 241 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGC 320 (341)
Q Consensus 241 ~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~ 320 (341)
++++.++......|++.||||+|++|++++++++.+++|+++++..+++|||||||+|+|||+++|++|+++++|+++|+
T Consensus 245 ~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaf~ag~~~~l~~g~~~~~a~~~A~ 324 (345)
T 1bx4_A 245 AKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAGH 324 (345)
T ss_dssp HHHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHhcccccccCCCEEEEEeCCCCeEEEECCeEEEEeccccCcCccccCCCcchHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 99884310000058899999999999999988888888887654457899999999999999999999999999999999
Q ss_pred HHhhhhhhhccccCCCCCCCC
Q 019448 321 YTSHVIIQRSGCTYPEKPEFN 341 (341)
Q Consensus 321 ~~Aa~~v~~~g~~~p~~~~~~ 341 (341)
++|+++|++.|+.+|.+++|.
T Consensus 325 ~~aa~~v~~~G~~~p~~~~~~ 345 (345)
T 1bx4_A 325 YAASIIIRRTGCTFPEKPDFH 345 (345)
T ss_dssp HHHHHHTTSSSSCCCSSCCCC
T ss_pred HHHHHHHhccCCCCCCcccCC
Confidence 999999999999999988873
No 6
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=100.00 E-value=1.7e-50 Score=374.80 Aligned_cols=330 Identities=32% Similarity=0.544 Sum_probs=277.9
Q ss_pred CCCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc
Q 019448 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 1 ~~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
|.++++|+|+|++++|++..++++++.++++++|+..+.+.++.|..++. +.......+||+++|+|+++++|...|.+
T Consensus 29 ~~~~~~vlviG~~~lD~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~-~~~~~~~~~GG~~~NvA~~la~Lg~~g~~ 107 (383)
T 2abs_A 29 ATGPMRVFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTL-DQFNPTSLPGGSALNSVRVVQKLLRKPGS 107 (383)
T ss_dssp -CCCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGGGGGTG-GGGCCEEEEESHHHHHHHHHHHHHCSTTS
T ss_pred CCCCceEEEECcchheeEeccCHHHHHhcCCCCCceeechhhHHHHHHhh-ccccceeeCCChHHHHHHHHHHhccCCCc
Confidence 34567999999999999999998889999999999988877778888877 77888999999999999999996544699
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccceE
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKY 160 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 160 (341)
+.|+|.+|+|.+|+.+++.|++.||+++++...+.+|+.+++++++|+|+++.+.++...+++++. ....+.++++
T Consensus 108 v~~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~T~~~~~~~~~g~r~~~~~~~a~~~l~~~~~----~~~~l~~~~~ 183 (383)
T 2abs_A 108 AGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLINEKERTLCTHLGACGSFRLPED----WTTFASGALI 183 (383)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHTCEEEEEECTTCCCEEEEEEEETTEEEEEEECGGGGGCCCCTT----HHHHTTTCCE
T ss_pred EEEEEEecCChhHHHHHHHHHHcCCceeeeecCCCCCeEEEEEEcCCceeEeeccChhhhCChhhh----hHHHhhcCCE
Confidence 999999999999999999999999999998766678999988888888888777777766776521 3356889999
Q ss_pred EEEeccccccCHHHHHHHHHHHHh-CCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCC------
Q 019448 161 FYIAGFFLTVSPDSIQLVAEHAAA-NNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWE------ 233 (341)
Q Consensus 161 v~i~~~~~~~~~~~~~~~~~~a~~-~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~------ 233 (341)
+|++++.+..+++.+..+++.+++ +++++++|++.+.|.....+.++++++++|++++|++|++.|++..+..
T Consensus 184 v~~~g~~~~~~~~~~~~~~~~a~~~~g~~v~~d~~~~~~~~~~~~~l~~ll~~~dil~pN~~Ea~~L~g~~~~~~~~~~~ 263 (383)
T 2abs_A 184 FYATAYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEKTA 263 (383)
T ss_dssp EEEEGGGGTTCHHHHHHHHHHHHTSTTCEEEEECCCHHHHHHCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTCC------
T ss_pred EEEeeecccCCHHHHHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHHHHHHhhCCEEeCCHHHHHHHhcccCcccccccc
Confidence 999998877788999999999999 9999999999877765566778889999999999999999998764322
Q ss_pred ------CCCHHHHHHHHhcCCccccC-CccEEEEEeCCCceEEE-----ECCeeEEEeceecCCCcccCCCCCchhhHHH
Q 019448 234 ------TDDVEEIALKLSQWPKASEI-RKRTAVITQGADPVVVA-----QDGKLKKFPVIVLPKDKLVDTNGAGDAFVGG 301 (341)
Q Consensus 234 ------~~d~~~~~~~l~~~~~~~~~-~~~~vvvt~G~~G~~~~-----~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag 301 (341)
.++++++++.+.++.+.... |++.||||+|++|++++ .+++.+++|+++++..+++||+||||+|+||
T Consensus 264 ~s~~~~~~~~~~~a~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ag 343 (383)
T 2abs_A 264 LSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDAFVGG 343 (383)
T ss_dssp ----CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCCCCCGGGCCCCTTHHHHHHHH
T ss_pred cccccccccHHHHHHHHHhccccccccCCCEEEEEcCCCCeEEEEeecCCCCeEEEecCccCCcCCcCcCCChHHHHHHH
Confidence 23456677776320000003 78999999999999998 5566777887655444789999999999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHhhhhhhhccccCC
Q 019448 302 FLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYP 335 (341)
Q Consensus 302 ~~~~l~~g~~~~~a~~~a~~~Aa~~v~~~g~~~p 335 (341)
|+++|++|+++++|+++|+++|+++|++.|+.+|
T Consensus 344 ~~~~l~~g~~l~~al~~A~a~aa~~v~~~Ga~~p 377 (383)
T 2abs_A 344 FLYALSQGKTVKQCIMCGNACAQDVIQHVGFSLS 377 (383)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHTSSSCCCC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHhcCCccCC
Confidence 9999999999999999999999999999999877
No 7
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=100.00 E-value=7.1e-50 Score=366.16 Aligned_cols=311 Identities=25% Similarity=0.392 Sum_probs=269.3
Q ss_pred CCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEeccccc-ccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc
Q 019448 2 AQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKH-LPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 2 ~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
|++++|+++|++++|++..++++|+.++++++|+..+.+.++ .+...+. ......+||++.|+|+++++ ||.+
T Consensus 23 m~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~li~~~~~~~l~~~~---~~~~~~~GG~~~N~A~~la~---LG~~ 96 (352)
T 4e3a_A 23 MTRFDVLTVGNAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRM---GPALEASGGSAGNTAAGVAN---LGGK 96 (352)
T ss_dssp CCSEEEEEECCCEEEEEEECCHHHHHHTTCCTTSEEECCHHHHHHHHHHS---CSCEEEECCHHHHHHHHHHH---HTCC
T ss_pred CCcccEEEECCceeeEEEecCHHHHHHcCCCCCcceEeCHHHHHHHHHHh---hhccEecCCHHHHHHHHHHH---cCCC
Confidence 346899999999999999999999999999999998876532 3333322 34578999999999999998 3599
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeeec-CCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccc
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYED-ESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKA 158 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~-~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 158 (341)
+.++|.+|+|.+|+.+++.|++.||+++++.. .+.+|+.++++++ +|+|+++.+.++...++++++.. ..++++
T Consensus 97 ~~~ig~vG~D~~G~~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~~g~r~~~~~~ga~~~l~~~~~~~----~~~~~~ 172 (352)
T 4e3a_A 97 AAYFGNVAADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTEDGERSMNTYLGACVELGPEDVEA----DVVADA 172 (352)
T ss_dssp EEEECCCCSSHHHHHHHHHHHHTTCEECCCCCCSSSCCEEEEEEECTTSCEEEEEECGGGGGCCGGGCCH----HHHHTE
T ss_pred eEEEEEECCChHHHHHHHHHHHcCCccceeeccCCCCCeEEEEEEcCCCceEEEeccChhhcCChhhCCH----HHHhhC
Confidence 99999999999999999999999999999864 4568999988887 79999988888888899988864 678999
Q ss_pred eEEEEecccc--ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC--CCcEEecCHHHHHHHhhhcCCCC
Q 019448 159 KYFYIAGFFL--TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP--YMDYIFGNETEARTFSKVQGWET 234 (341)
Q Consensus 159 ~~v~i~~~~~--~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~--~~dvl~~n~~E~~~l~~~~~~~~ 234 (341)
+++|++++.+ ..+.+.+..+++.+++++.++++|++.+.+....++.+.++++ ++|++++|++|++.|++ .
T Consensus 173 ~~v~~~G~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~l~~ll~~~~~dil~~N~~Ea~~l~g-----~ 247 (352)
T 4e3a_A 173 KVTYFEGYLWDPPRAKEAILDCARIAHQHGREMSMTLSDSFCVDRYRGEFLDLMRSGKVDIVFANRQEALSLYQ-----T 247 (352)
T ss_dssp EEEEEEGGGGSSSSHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHTTSCCEEEEEHHHHHHHTT-----C
T ss_pred CEEEEeeeecCCchHHHHHHHHHHHHHHcCCEEEEECCchhhHHHHHHHHHHHhcccCCcEEEeCHHHHHHHhC-----C
Confidence 9999999863 3346789999999999999999999887666667777889998 89999999999999987 3
Q ss_pred CCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHH
Q 019448 235 DDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEE 314 (341)
Q Consensus 235 ~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~ 314 (341)
++++++++.+ .. +++.+|||+|++|++++++++.+++|+++++ +++|||||||+|+|||+++|++|+++++
T Consensus 248 ~~~~~a~~~l------~~-~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~--~vvDttGAGDaF~agfl~~l~~g~~l~~ 318 (352)
T 4e3a_A 248 DDFEEALNRI------AA-DCKIAAVTMSENGAVILKGRERYYVNAIRIR--EVVDTTGAGDLFASGFLYGYTQGRSLED 318 (352)
T ss_dssp SCHHHHHHHH------HH-HSSEEEEECGGGCEEEEETTEEEEECCCCCS--CCSCCTTHHHHHHHHHHHHHHTTCCHHH
T ss_pred CCHHHHHHHH------hc-CCCEEEEEECCCceEEEECCEEEEECCccCC--CCcCCCChHHHHHHHHHHHHHcCCCHHH
Confidence 5788888887 33 5789999999999999999999999987652 4899999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhccccCCC
Q 019448 315 CVRAGCYTSHVIIQRSGCTYPE 336 (341)
Q Consensus 315 a~~~a~~~Aa~~v~~~g~~~p~ 336 (341)
|+++|+++|+.+|++.|+..|.
T Consensus 319 a~~~A~~aAa~~v~~~G~~~~~ 340 (352)
T 4e3a_A 319 CGKLGCLAAGIVIQQIGPRPMT 340 (352)
T ss_dssp HHHHHHHHHHHHTTSSSSSCSS
T ss_pred HHHHHHHHHHHHHcCCCCCCCc
Confidence 9999999999999999996443
No 8
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=100.00 E-value=3.1e-49 Score=355.35 Aligned_cols=293 Identities=21% Similarity=0.267 Sum_probs=253.5
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHh-ccCCceEecCchHHHHHHHHHHHhcCCCcEEE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMA-SKYNVEYIAGGATQNSIRVAQWMLQIPGATSY 83 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~ 83 (341)
++|+|+|++++|++..++ ++|.+++.. +.......+||++.|+|+++++ ||.++.+
T Consensus 3 ~~v~viG~~~~D~~~~~~--------------------~~p~~g~~~~~~~~~~~~~GG~~~NvA~~la~---lG~~~~~ 59 (304)
T 3ry7_A 3 NKVVILGSTNVDQFLTVE--------------------RYAQPGETLHVEEAQKAFGGGKGANQAIATAR---MQADTTF 59 (304)
T ss_dssp CEEEEECCCEEEEEEECS--------------------SCCCTTCCCCCSSCCEEEEECHHHHHHHHHHH---TTCEEEE
T ss_pred CcEEEEccceeEEEEecc--------------------CCCCCCCceecccceeecCCCHHHHHHHHHHH---CCCCeEE
Confidence 589999999999999887 567666666 6778899999999999999998 5699999
Q ss_pred EeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccceEE
Q 019448 84 IGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYF 161 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 161 (341)
+|.+|+|.+|+.+++.|++.||+++++. .++.+|+.++++++ +|+++++.+.+++..+++++++. ....+++++++
T Consensus 60 ~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~--~~~~~~~~~~v 137 (304)
T 3ry7_A 60 ITKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQNTIYVYGGANMTMTPEDVIN--AKDAIINADFV 137 (304)
T ss_dssp ECEEESSCTTHHHHHHHHHTTCBCTTCEEESSSCCEEEEEEECSSCCEEEEEECGGGGGCCHHHHHT--THHHHHTCSEE
T ss_pred EEEeCCChHHHHHHHHHHHcCCcchhEEEcCCCCCcEEEEEECCCCCEEEEEecCchhcCCHHHHHH--HHHHhccCCEE
Confidence 9999999999999999999999999885 46678999988887 68998888888878888887754 33568899999
Q ss_pred EEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHH
Q 019448 162 YIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIA 241 (341)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~ 241 (341)
++++ ..+.+.+..+++.+++++.++++|+.... +...++++++|++++|++|++.|++....+.++.++++
T Consensus 138 ~~~~---~~~~~~~~~~~~~a~~~~~~v~~D~~~~~------~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~ 208 (304)
T 3ry7_A 138 VAQL---EVPIPAIISAFEIAKAHGVTTVLNPAPAK------ALPNELLSLIDIIVPNETEAELLSGIKVTNEQSMKDNA 208 (304)
T ss_dssp EEET---TSCHHHHHHHHHHHHHTTCEEEEECCSCC------CCCHHHHTTCSEECCBHHHHHHHHSCCCCSHHHHHHHH
T ss_pred EEcC---CCCHHHHHHHHHHHHHcCCEEEEeCCccc------cccHHHHHhCCEEecCHHHHHHHhCCCCCChhHHHHHH
Confidence 9975 45788999999999999999999997531 23567889999999999999999986443334667788
Q ss_pred HHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcC-CCHHHHHHHHH
Q 019448 242 LKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE-KPIEECVRAGC 320 (341)
Q Consensus 242 ~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g-~~~~~a~~~a~ 320 (341)
+++ .+.+++.+|||+|++|++++++++.+++|++++ +++|++||||+|+|||+++|++| +++++|+++|+
T Consensus 209 ~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vdttGAGDaf~a~~~~~l~~g~~~~~~a~~~A~ 279 (304)
T 3ry7_A 209 NYF------LSIGIKTVLITLGKQGTYFATKNQSQHIEAYKV---NAIDTTAAGDTFIGAFVSRLNKSQDNLADAIDFGN 279 (304)
T ss_dssp HHH------HHTTCCEEEEECGGGCEEEECSSCEEEECCSSC---CSSCCSSHHHHHHHHHHHHCCTTCTTHHHHHHHHH
T ss_pred HHH------HHcCCCEEEEEeCCCceEEEECCeeEEecCCCc---ccCCCCCchHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 888 667889999999999999998888899988765 78999999999999999999999 99999999999
Q ss_pred HHhhhhhhhccc--cCCCCCCC
Q 019448 321 YTSHVIIQRSGC--TYPEKPEF 340 (341)
Q Consensus 321 ~~Aa~~v~~~g~--~~p~~~~~ 340 (341)
++|+++|++.|+ .+|+.+|+
T Consensus 280 ~~aa~~~~~~G~~~~~p~~~ev 301 (304)
T 3ry7_A 280 KASSLTVQKHGAQASIPLLEEV 301 (304)
T ss_dssp HHHHTTSCCCCTGGGCCCHHHH
T ss_pred HHHHHHhCCCCccccCCCHHHH
Confidence 999999999999 46887654
No 9
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=100.00 E-value=3.5e-48 Score=349.26 Aligned_cols=297 Identities=23% Similarity=0.334 Sum_probs=248.4
Q ss_pred CCCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc
Q 019448 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 1 ~~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
|+++++|+|+|++++|++..++ ++|..++..+.......+||++.|+|+++++ ||.+
T Consensus 1 m~~~~~v~viG~~~iD~~~~~~--------------------~~p~~g~~~~~~~~~~~~GG~~~N~A~~la~---lG~~ 57 (309)
T 1rkd_A 1 MQNAGSLVVLGSINADHILNLQ--------------------SFPTPGETVTGNHYQVAFGGKGANQAVAAGR---SGAN 57 (309)
T ss_dssp ---CCEEEEECCCEEEEEEECS--------------------SCCCTTCCCCCCCEEEEEECHHHHHHHHHHH---HTCE
T ss_pred CCCCCeEEEECcceEeEEEecC--------------------CCCCCCCeeecCceeecCCCHHHHHHHHHHh---CCCc
Confidence 7778899999999999999887 5566666666677888999999999999998 3599
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccc
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKA 158 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 158 (341)
+.++|.+|+|.+|+.+++.|++.||+++++. .++.+|+.++++++ +|+++++.+.+++..++++++.. ....+.++
T Consensus 58 ~~~~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~ 135 (309)
T 1rkd_A 58 IAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEA--QRERIANA 135 (309)
T ss_dssp EEEEEEEESSTTHHHHHHHHHTTTEECTTEEEETTCCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHT--THHHHHHC
T ss_pred eEEEEEECCCHHHHHHHHHHHHcCCCccceEecCCCCCceEEEEECCCCCeEEEEeCCchhcCCHHHHHH--HHHhcccC
Confidence 9999999999999999999999999999875 45668999988887 58888877777777788777653 23467889
Q ss_pred eEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHH
Q 019448 159 KYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVE 238 (341)
Q Consensus 159 ~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~ 238 (341)
+++++++ ..+.+.+..+++.+++++.++++|+.... +...++++++|++++|++|++.|++....+.+++.
T Consensus 136 ~~v~~~~---~~~~~~~~~~~~~a~~~g~~v~~D~~~~~------~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~ 206 (309)
T 1rkd_A 136 SALLMQL---ESPLESVMAAAKIAHQNKTIVALNPAPAR------ELPDELLALVDIITPNETEAEKLTGIRVENDEDAA 206 (309)
T ss_dssp SEEEECS---SSCHHHHHHHHHHHHHTTCEEEECCCSCC------CCCHHHHTTCSEECCCHHHHHHHHSCCCSSHHHHH
T ss_pred CEEEEeC---CCCHHHHHHHHHHHHHcCCEEEEECCccc------cchHHHHhhCCEEEcCHHHHHHHhCCCCCCHHHHH
Confidence 9999975 45678889999999999999999997531 11346789999999999999999875332224566
Q ss_pred HHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHH
Q 019448 239 EIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRA 318 (341)
Q Consensus 239 ~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~ 318 (341)
++++++ .+.|++.||||+|++|++++++++.+++|++++ +++||+||||+|+|+|+++|++|+++++|+++
T Consensus 207 ~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vdt~GAGD~f~a~~~~~l~~g~~~~~a~~~ 277 (309)
T 1rkd_A 207 KAAQVL------HEKGIRTVLITLGSRGVWASVNGEGQRVPGFRV---QAVDTIAAGDTFNGALITALLEEKPLPEAIRF 277 (309)
T ss_dssp HHHHHH------HHTTCSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHH------HHhCCCEEEEEECCCcEEEEeCCceEEcCCCCC---CcCCCCChHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 777777 567889999999999999998888888887654 78999999999999999999999999999999
Q ss_pred HHHHhhhhhhhccc--cCCCCCCC
Q 019448 319 GCYTSHVIIQRSGC--TYPEKPEF 340 (341)
Q Consensus 319 a~~~Aa~~v~~~g~--~~p~~~~~ 340 (341)
|+++|++++++.|+ .+|+.+|+
T Consensus 278 a~~~aa~~~~~~G~~~~~p~~~ev 301 (309)
T 1rkd_A 278 AHAAAAIAVTRKGAQPSVPWREEI 301 (309)
T ss_dssp HHHHHHHHHTSSSSGGGCCCHHHH
T ss_pred HHHHHHHHcCCCCccCCCCCHHHH
Confidence 99999999999998 47876653
No 10
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=100.00 E-value=1.7e-47 Score=347.93 Aligned_cols=298 Identities=24% Similarity=0.309 Sum_probs=247.9
Q ss_pred CCCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc
Q 019448 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 1 ~~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
|+++++|+|+|++++|++..++ ++|.+++..+.......+||+++|+|+++++ ||.+
T Consensus 21 m~~~~~vlviG~~~iD~~~~~~--------------------~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~---LG~~ 77 (331)
T 2fv7_A 21 QEEVAAVVVVGSCMTDLVSLTS--------------------RLPKTGETIHGHKFFIGFGGKGANQCVQAAR---LGAM 77 (331)
T ss_dssp ---CCSEEEECCCEEEEEEECS--------------------SCCCTTCCCCCSEEEEEEECHHHHHHHHHHH---TTCC
T ss_pred ccccCCEEEECcccEEEEEecC--------------------CCCCCCceEecCceEECcCCHHHHHHHHHHH---CCCC
Confidence 6667799999999999999887 5566666556667788999999999999998 4699
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeeec-CCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccc
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYED-ESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKA 158 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~-~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 158 (341)
+.++|.+|+|.+|+.+++.|++.||+++++.. ++.+|+.++++++ +|+|+++.+.+++..++++++.. ....+.++
T Consensus 78 ~~~i~~vG~D~~G~~l~~~L~~~Gv~~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~l~~~~~~~--~~~~l~~~ 155 (331)
T 2fv7_A 78 TSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLRA--AANVISRA 155 (331)
T ss_dssp EEEEEEEESSHHHHHHHHHHHTTTEECTTEEEESSSCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHH--THHHHHHC
T ss_pred eEEEEEECCChhHHHHHHHHHHcCCcceeeEecCCCCCceEEEEECCCCCeEEEecCCccccCCHHHHHH--HHHhhccC
Confidence 99999999999999999999999999998754 5678999988887 58888888777776777776642 22457889
Q ss_pred eEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHH
Q 019448 159 KYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVE 238 (341)
Q Consensus 159 ~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~ 238 (341)
+++++++ ..+.+.+..+++.+++++.++++||.... .....++++++|++++|++|++.|++....+.++++
T Consensus 156 ~~v~~~~---~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~-----~~~~~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~ 227 (331)
T 2fv7_A 156 KVMVCQL---EITPATSLEALTMARRSGVKTLFNPAPAI-----ADLDPQFYTLSDVFCCNESEAEILTGLTVGSAADAG 227 (331)
T ss_dssp SEEEECS---SSCHHHHHHHHHHHHHTTCEEEECCCSCC-----TTCCTHHHHTCSEEEEEHHHHHHHHSSCCCSHHHHH
T ss_pred CEEEEec---CCCHHHHHHHHHHHHHcCCEEEEeCCccc-----ccchHHHHhcCCEEEeCHHHHHHHhCCCCCChhHHH
Confidence 9999975 35678889999999999999999997531 111346788999999999999999875432334566
Q ss_pred HHHHHHhcCCccccCCccEEEEEeCCCceEEEECC--eeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcC--CCHHH
Q 019448 239 EIALKLSQWPKASEIRKRTAVITQGADPVVVAQDG--KLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE--KPIEE 314 (341)
Q Consensus 239 ~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~--~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g--~~~~~ 314 (341)
++++++ .+.|++.||||+|++|+++++++ +.+++|++++ +++||+||||+|+|||+++|++| +++++
T Consensus 228 ~~~~~l------~~~g~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~~~~~ 298 (331)
T 2fv7_A 228 EAALVL------LKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKV---KAVDTTGAGDSFVGALAFYLAYYPNLSLED 298 (331)
T ss_dssp HHHHHH------HTTTCSEEEEECGGGCEEEEESSCCSCEEECCCCC---CCSCCTTHHHHHHHHHHHHHHHCTTSCHHH
T ss_pred HHHHHH------HHcCCCEEEEEECCCceEEEECCCCceeEecCCCC---ccCCCCCchHHHHHHHHHHHHhCCCCCHHH
Confidence 778887 56789999999999999998877 7788887654 78999999999999999999999 99999
Q ss_pred HHHHHHHHhhhhhhhccc--cCCCCCCC
Q 019448 315 CVRAGCYTSHVIIQRSGC--TYPEKPEF 340 (341)
Q Consensus 315 a~~~a~~~Aa~~v~~~g~--~~p~~~~~ 340 (341)
|+++|+++|+.+|++.|+ .+|+.+|+
T Consensus 299 a~~~A~~~aa~~v~~~G~~~~~p~~~ev 326 (331)
T 2fv7_A 299 MLNRSNFIAAVSVQAAGTQSSYPYKKDL 326 (331)
T ss_dssp HHHHHHHHHHHHHTSSSGGGGCCCGGGS
T ss_pred HHHHHHHHHHHHhCCCCCccCCCCHHHH
Confidence 999999999999999998 67888876
No 11
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=100.00 E-value=5.6e-47 Score=342.84 Aligned_cols=290 Identities=21% Similarity=0.305 Sum_probs=234.5
Q ss_pred CCCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCC--
Q 019448 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIP-- 78 (341)
Q Consensus 1 ~~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg-- 78 (341)
|+|+++|+|+|++++|++... ......+||+++|+|+++++ ||
T Consensus 1 m~m~~~i~viG~~~~D~~~~~--------------------------------~~~~~~~GG~~~NvA~~la~---LG~~ 45 (319)
T 3lhx_A 1 MSLSKKIAVIGECMIELSEKG--------------------------------ADVKRGFGGDTLNTSVYIAR---QVDP 45 (319)
T ss_dssp ---CEEEEEESCCEEEEEC-----------------------------------CCEEEEECHHHHHHHHHHT---TSCT
T ss_pred CCccCceeeechhhhhhccCC--------------------------------CceEEecCChHHHHHHHHHH---cCCC
Confidence 888889999999999997632 24578999999999999997 56
Q ss_pred --CcEEEEeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeeccccc---ccCCcccCCCcch
Q 019448 79 --GATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAA---NCYKSEHLKKPEN 151 (341)
Q Consensus 79 --~~v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~---~~~~~~~~~~~~~ 151 (341)
.++.++|.+|+|.+|+.+++.|++.||+++++. .++.+|+.+++.++ +|+|+++.+.+.. ..++++++.. .
T Consensus 46 ~~~~~~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~--~ 123 (319)
T 3lhx_A 46 AALTVHYVTALGTDSFSQQMLDAWHGENVDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLASEQSAA--I 123 (319)
T ss_dssp TTEEEEEECEECSSHHHHHHHHHHHTTTEECTTCEECTTCCCCEEEEEC----CCEEEEECTTCGGGGTTSSSSHHH--H
T ss_pred CCCcEEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEeCCCCCeeEEEecCCCHHHhccCccchhh--H
Confidence 899999999999999999999999999999875 44567888887776 7899887765532 2344444321 3
Q ss_pred hhhhccceEEEEeccccc-c---CHHHHHHHHHHHHhCCCeEEEeCCch--hHH--HHHHHHHHhhcCCCcEEecCHHHH
Q 019448 152 WALVEKAKYFYIAGFFLT-V---SPDSIQLVAEHAAANNKVFMMNLSAP--FIC--EFFKDALEKVLPYMDYIFGNETEA 223 (341)
Q Consensus 152 ~~~l~~~~~v~i~~~~~~-~---~~~~~~~~~~~a~~~~~~v~~d~~~~--~~~--~~~~~~~~~~l~~~dvl~~n~~E~ 223 (341)
...++++|++|++++.+. + +.+.+.++++.+++++.++++||... .|. ....+.++++++++|++++|++|+
T Consensus 124 ~~~l~~~~~v~~~g~~~~~l~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~di~~~n~~E~ 203 (319)
T 3lhx_A 124 CEELANFDYLYLSGISLAILSPTSREKLLSLLRECRAKGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDE 203 (319)
T ss_dssp HHHHTTCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEEEHHHH
T ss_pred HHHhcCCCEEEEcCchhhhcCchhHHHHHHHHHHHHhcCCEEEEeCcCCcccccCHHHHHHHHHHHHhhCCcccCCHHHH
Confidence 457899999999987643 2 34678899999999999999999632 222 234566788999999999999999
Q ss_pred HHHhhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeE-EEeceecCCCcccCCCCCchhhHHHH
Q 019448 224 RTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLK-KFPVIVLPKDKLVDTNGAGDAFVGGF 302 (341)
Q Consensus 224 ~~l~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~-~~~~~~~~~~~~vd~tGAGDaf~ag~ 302 (341)
+.+++. ++++++++++ .+.|++.||||+|++|++++++++.+ ++|+++++.++++||+||||+|+|||
T Consensus 204 ~~l~g~-----~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~ 272 (319)
T 3lhx_A 204 DALWGQ-----QPVEDVIART------HNAGVKEVVVKRGADSCLVSIAGEALVDVPAVKLPKEKVIDTTAAGDSFSAGY 272 (319)
T ss_dssp HHHHCC-----CCHHHHHHHH------HHTTCSEEEEEETTEEEEEEETTSCCEEECCCCCCGGGCCCCTTHHHHHHHHH
T ss_pred HHHhCC-----CCHHHHHHHH------HhcCCCEEEEEECCCCeEEEECCcceEEcccccCCCCccCCCCCccHHHHHHH
Confidence 999873 5788999998 66789999999999999999887654 88876444458999999999999999
Q ss_pred HHHHhcCCCHHHHHHHHHHHhhhhhhhccccCCCCC
Q 019448 303 LSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKP 338 (341)
Q Consensus 303 ~~~l~~g~~~~~a~~~a~~~Aa~~v~~~g~~~p~~~ 338 (341)
+++|++|+++++|+++|+++|+.+|++.|+.+|...
T Consensus 273 ~~~l~~g~~~~~a~~~A~~~aa~~v~~~Ga~~~~~~ 308 (319)
T 3lhx_A 273 LAVRLTGGSAENAAKRGHLTASTVIQYRGAIIPREA 308 (319)
T ss_dssp HHHHTTTCCHHHHHHHHHHHHHHHTTSSSSSCCGGG
T ss_pred HHHHHcCCCHHHHHHHHHHHHHhhhccCCCcCCCCC
Confidence 999999999999999999999999999999887654
No 12
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=100.00 E-value=9.6e-47 Score=343.55 Aligned_cols=294 Identities=18% Similarity=0.248 Sum_probs=233.4
Q ss_pred CCCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc
Q 019448 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 1 ~~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
|.++++|+|+|++++|++...+ ++..+.......+||++.|+|+++++ ||.+
T Consensus 23 m~~~~~vlviG~~~iD~~~~~~-------------------------g~~~~~~~~~~~~GG~~~NvA~~la~---LG~~ 74 (336)
T 4du5_A 23 MTSALDVITFGEAMMLLVADRP-------------------------GPLEHAEAFHKRTAGAETNVAIGLAR---LGLK 74 (336)
T ss_dssp ---CEEEEEECCCEEEEEESSS-------------------------SCGGGCCEEEEEEECHHHHHHHHHHH---TTCC
T ss_pred cCCCCCEEEEChhhhhccCCCC-------------------------CccchhhheeecCCCHHHHHHHHHHh---CCCc
Confidence 6667899999999999997543 23445667788999999999999998 4699
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceee---cccccccCCcccCCCcchhhhh
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVA---NLSAANCYKSEHLKKPENWALV 155 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~l 155 (341)
+.++|.+|+|.+|+.+++.|++.||+++++. .++.+|+.+++..+ +|+++.+. ..++...++++++.. ..+
T Consensus 75 ~~~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~a~~~l~~~~~~~----~~l 150 (336)
T 4du5_A 75 VGWASRLGTDSMGRYLLAAMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDE----AWL 150 (336)
T ss_dssp EEEEEEECSSHHHHHHHHHHHTTTCEEEEEEECTTSCCCEEEECCCSCC--CCEEEECTTCTGGGCCGGGCCH----HHH
T ss_pred EEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCcEEEEEEEcCCCCcceEEEECCCChhHhCChhhCCH----hHh
Confidence 9999999999999999999999999999885 45567888877776 57555442 235667788887763 568
Q ss_pred ccceEEEEeccccccC---HHHHHHHHHHHHhCCCeEEEeCCc--hhHH--HHHHHHHHhhcCCCcEEecCHHHHHHHhh
Q 019448 156 EKAKYFYIAGFFLTVS---PDSIQLVAEHAAANNKVFMMNLSA--PFIC--EFFKDALEKVLPYMDYIFGNETEARTFSK 228 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~---~~~~~~~~~~a~~~~~~v~~d~~~--~~~~--~~~~~~~~~~l~~~dvl~~n~~E~~~l~~ 228 (341)
+++++++++++.+..+ .+.+..+++.+++++.++++||.. ..|. ....+.++++++++|++++|++|++.|++
T Consensus 151 ~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~Ea~~l~g 230 (336)
T 4du5_A 151 LSARHLHATGVFPAISATTLPAARKTMDLMRAAGRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFLTG 230 (336)
T ss_dssp TTEEEEEEESSGGGSCTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSSHHHHHHHHHHHHTTCSEECCBHHHHHHHHC
T ss_pred ccCCEEEEcCchhhCChHHHHHHHHHHHHHHHCCCEEEEeCcCCchhcCChHHHHHHHHHHHHhCCEEECCHHHHHHHhC
Confidence 8999999999765333 367789999999999999999962 2222 22356678899999999999999999987
Q ss_pred hcCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCc-ccCCCCCchhhHHHHHHHHh
Q 019448 229 VQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDK-LVDTNGAGDAFVGGFLSQLV 307 (341)
Q Consensus 229 ~~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~-~vd~tGAGDaf~ag~~~~l~ 307 (341)
.++++++++.+ .+.|++.||||+|++|++++++++.+++|++++ + ++||+||||+|+|||+++|+
T Consensus 231 -----~~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vvdttGAGDaf~a~~~~~l~ 296 (336)
T 4du5_A 231 -----ETTPEGVARFY------RQLGAKLVVVKLGAEGAYFDGEAGSGRVAGFPV---AEVVDTVGAGDGFAVGVISALL 296 (336)
T ss_dssp -----CCSHHHHHHHH------HHTTCSEEEEECGGGCEEEEETTEEEEECCCCC----------CHHHHHHHHHHHHHH
T ss_pred -----CCCHHHHHHHH------HhcCCCEEEEEecCCceEEEECCeEEEeCCccC---CCCCCCccchHHHHHHHHHHHH
Confidence 35788999988 667899999999999999999999899988765 5 89999999999999999999
Q ss_pred cCCCHHHHHHHHHHHhhhhhhhcccc--CCCCCCC
Q 019448 308 QEKPIEECVRAGCYTSHVIIQRSGCT--YPEKPEF 340 (341)
Q Consensus 308 ~g~~~~~a~~~a~~~Aa~~v~~~g~~--~p~~~~~ 340 (341)
+|+++++|+++|+++|+++|++.|+. +|+.+|+
T Consensus 297 ~g~~l~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev 331 (336)
T 4du5_A 297 DGLGVPEAVKRGAWIGARAVQVLGDSEGLPTRAEL 331 (336)
T ss_dssp TTCCHHHHHHHHHHHHHHHHC------CCCCHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHhccCCCccCCCCHHHH
Confidence 99999999999999999999999984 8887664
No 13
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=100.00 E-value=2.3e-47 Score=348.05 Aligned_cols=296 Identities=23% Similarity=0.256 Sum_probs=230.4
Q ss_pred CCCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc
Q 019448 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 1 ~~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
|+++++|+|+|++++|++...+ +.|.. .......+||+++|+|+++++ ||.+
T Consensus 1 M~~~~~v~viG~~~iD~~~~~~--------------------~~~~~-----~~~~~~~~GG~~~NvA~~la~---LG~~ 52 (338)
T 3ljs_A 1 MSLKKTILCFGEALIDMLAQPL--------------------VKKGM-----PRAFLQCAGGAPANVAVAVAR---LGGA 52 (338)
T ss_dssp ---CCEEEEESCCEEEEEECCC--------------------SSTTS-----CCCEEEEEECHHHHHHHHHHH---HTCC
T ss_pred CCCCCCEEEEChhhhheeccCC--------------------CCccc-----hhceeecCCChHHHHHHHHHh---CCCC
Confidence 8999999999999999998776 22221 467788999999999999998 3599
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeecc--cccccCCcccCCCcchhhhhc
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKKPENWALVE 156 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~ 156 (341)
+.++|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.+++.++ +|+|++..+. +++..++++++.. ..+.
T Consensus 53 ~~~ig~vG~D~~g~~l~~~l~~~gV~~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~~~----~~~~ 128 (338)
T 3ljs_A 53 VQFVGMLGSDMFGDFLFDSFAEAGVVTDGIVRTSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQD----ASFS 128 (338)
T ss_dssp EEEESEEESSHHHHHHHHHHHHHTCBCTTCEEESSSCCCEEEEECCSTTCCEEEEECSSCGGGGCCGGGCCH----HHHH
T ss_pred EEEEeeccCCHHHHHHHHHHHHcCCCceeEEEcCCCCceEEEEEECCCCCeEEEEeCCCChhHhCCHhhcCH----hHhc
Confidence 9999999999999999999999999999875 46678999988876 6888875543 5666788888763 5688
Q ss_pred cceEEEEecccc--ccCHHHHHHHHHHHHhCCCeEEEeCCch--hHH--HHHHHHHHhhcCCCcEEecCHHHHHHHhhhc
Q 019448 157 KAKYFYIAGFFL--TVSPDSIQLVAEHAAANNKVFMMNLSAP--FIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQ 230 (341)
Q Consensus 157 ~~~~v~i~~~~~--~~~~~~~~~~~~~a~~~~~~v~~d~~~~--~~~--~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~ 230 (341)
+++++|++++.+ ..+.+.+..+++.+++++.++++||... .|. ....+.++++++++|++++|++|++.|++..
T Consensus 129 ~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~ 208 (338)
T 3ljs_A 129 DALIFHACSNSMTDADIAEVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLANTL 208 (338)
T ss_dssp TEEEEEEEGGGGSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCTTCCTHHHHHHHHHTCSEEEEEHHHHHHHHHHH
T ss_pred CCCEEEECChHhcCchHHHHHHHHHHHHHHcCCEEEEECCCChhhcCCHHHHHHHHHHHHhhCCEEEecHHHHHHHhCCC
Confidence 999999998764 2345788999999999999999999532 221 1135667889999999999999999998853
Q ss_pred CCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcC-
Q 019448 231 GWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE- 309 (341)
Q Consensus 231 ~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g- 309 (341)
.. +.+++++.+ .+.|++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|
T Consensus 209 ~~---~~~~~~~~l------~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~a~~~~~l~~g~ 276 (338)
T 3ljs_A 209 AA---DANAVIQQL------WQGRAQLLLVTDAAGPVHWYTRTAGGEVPTFRV---QVQDSNAAGDAFVGGMLYTFAQQF 276 (338)
T ss_dssp TS---CHHHHHHHH------TTTTCCEEEEEETTEEEEEEESSCEEEECC--------------CHHHHHHHHHHHHHHC
T ss_pred Ch---hHHHHHHHH------HhcCCCEEEEeeCCCceEEEECCceEEeCCCCC---ccCCCCCccHHHHHHHHHHHHhCC
Confidence 21 223478888 667899999999999999999988899998765 88999999999999999999999
Q ss_pred -------------CCHHHHHHHHHHHhhhhhhhccc--cCCCCCCC
Q 019448 310 -------------KPIEECVRAGCYTSHVIIQRSGC--TYPEKPEF 340 (341)
Q Consensus 310 -------------~~~~~a~~~a~~~Aa~~v~~~g~--~~p~~~~~ 340 (341)
+++++|+++|+++|+++|++.|+ .+|+.+|+
T Consensus 277 ~~~~~~~~~~~~~~~l~~al~~A~~~aa~~v~~~Ga~~~~p~~~ev 322 (338)
T 3ljs_A 277 DDAAALIDFCHDPESIVSTLRFAAAVGALAVTRQGAFTAMPMLSEV 322 (338)
T ss_dssp SSTHHHHHHHTCHHHHHHHHHHHHHHHGGGC----CCCCTTHHHHH
T ss_pred CcccchhccccChHHHHHHHHHHHHHHHHHhCCCCCCCCCCCHHHH
Confidence 89999999999999999999998 56776553
No 14
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1e-46 Score=344.05 Aligned_cols=286 Identities=18% Similarity=0.184 Sum_probs=243.2
Q ss_pred CceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEE
Q 019448 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~ 83 (341)
+++|+++|++++|++..++ ++|..++..+.......+||+++|+|+++++ ||.++.+
T Consensus 29 ~~~i~viG~~~iD~~~~~~--------------------~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~ 85 (343)
T 2rbc_A 29 GKHVLCVGAAVLDTLFRVA--------------------DMPKGEGKVLPYEVLQIAEGMASSAAYAVHR---MGGRASL 85 (343)
T ss_dssp CCEEEEESCCEEEEEEECS--------------------SCCCSSSCCCCSEEEEEEECHHHHHHHHHHH---TTCEEEE
T ss_pred CCeEEEECcceEEEEeecC--------------------CCCCCCCeEeeeeeEEcCCcHHHHHHHHHHH---cCCceEE
Confidence 4589999999999999887 4455455555667788999999999999998 4699999
Q ss_pred EeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccceEE
Q 019448 84 IGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYF 161 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 161 (341)
+|.+|+|.+|+.+++.|++.||+++++. .++.+|+.++++++ +|+|+++.+.+++..++++++. ...+.+++++
T Consensus 86 i~~vG~D~~G~~i~~~L~~~GVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~~~~~~~~l~----~~~l~~~~~v 161 (343)
T 2rbc_A 86 WGAVGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYDHRLHEKKRACT----PEDIALFDAV 161 (343)
T ss_dssp ECEEESSHHHHHHHHHHHHTTEECTTCEEETTCCCEEEEEEECTTSCEEEEEECCGGGGSSCCCCC----HHHHTTCSEE
T ss_pred EEEeCCCHHHHHHHHHHHHcCCceeeEEEcCCCCCceEEEEECCCCCEEEEEcCCCcccCChhHhc----HhhhCCCCEE
Confidence 9999999999999999999999999875 45668999888887 6888887677766667776664 2467899999
Q ss_pred EEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHh-hcCCCcEEecCHHHHHHHhhhcCCCCCCHHHH
Q 019448 162 YIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEK-VLPYMDYIFGNETEARTFSKVQGWETDDVEEI 240 (341)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~-~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~ 240 (341)
|++++. ++.+..+++.+++.+.++++||... .+.+.+ +++++|++++|++|++.|++. ++++++
T Consensus 162 ~~~~~~----~~~~~~~~~~a~~~g~~v~~Dp~~~------~~~~~~~ll~~~dil~~N~~Ea~~l~g~-----~~~~~~ 226 (343)
T 2rbc_A 162 LVDVRW----PELALDVLTVARALGKPAILDGDVA------PVETLEGLAPAATHIVFSEPAATRLTGL-----ETVKDM 226 (343)
T ss_dssp EECSSS----HHHHHHHHHHHHHTTCCEEEEECSC------CHHHHHHHGGGCSEEEEEHHHHHHHHCC-----SSHHHH
T ss_pred EEcCCC----HHHHHHHHHHHHHCCCEEEEECCcc------ccccHHHHHhcCCEEEeCHHHHHHHcCC-----CCHHHH
Confidence 998743 5678899999999999999999752 234666 899999999999999999873 478888
Q ss_pred HHHHhcCCccccCCc-cEEEEEeCCCceEEEECC--eeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHH
Q 019448 241 ALKLSQWPKASEIRK-RTAVITQGADPVVVAQDG--KLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVR 317 (341)
Q Consensus 241 ~~~l~~~~~~~~~~~-~~vvvt~G~~G~~~~~~~--~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~ 317 (341)
++.+ .+.|+ +.||||+|++|+++++++ +.+++|++++ +++||+||||+|+|||+++|++|+++++|++
T Consensus 227 ~~~l------~~~g~~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~~~~l~~g~~~~~a~~ 297 (343)
T 2rbc_A 227 LPVL------HARYPQTFIAVTAGPAGCWWTEADDPTVHFQTTMQV---EAVDTLAAGDIFHGTFALAMAEGMQSRAAVR 297 (343)
T ss_dssp HHHH------HHHSTTSEEEEECGGGCEEEECTTCCCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHH------HHhCCCceEEEEECCcceEEEeCCCceeEEecCCCC---ccccCCChHHHHHHHHHHHHHcCCCHHHHHH
Confidence 8888 56788 899999999999999877 7888887654 7999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhcccc--CCCCCCC
Q 019448 318 AGCYTSHVIIQRSGCT--YPEKPEF 340 (341)
Q Consensus 318 ~a~~~Aa~~v~~~g~~--~p~~~~~ 340 (341)
+|+++|+++|++.|+. +|+.+|+
T Consensus 298 ~A~~~aa~~v~~~G~~~~~p~~~ev 322 (343)
T 2rbc_A 298 LSSVAAALKCTVFGGRIGAPTREET 322 (343)
T ss_dssp HHHHHHHHHHTSSSGGGGCCCHHHH
T ss_pred HHHHHHHHHhCCCCCccCCCCHHHH
Confidence 9999999999999984 7876653
No 15
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=100.00 E-value=5.5e-47 Score=344.44 Aligned_cols=295 Identities=18% Similarity=0.194 Sum_probs=236.8
Q ss_pred CCCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc
Q 019448 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 1 ~~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
||| ++|+|+|++++|++...+. .+..........++||+++|+|+++++ ||.+
T Consensus 1 m~m-~~i~viG~~~~D~~~~~~~-----------------------~~~~~~~~~~~~~~GG~~~NvA~~la~---LG~~ 53 (330)
T 3iq0_A 1 MSL-SKVFTIGEILVEIMASKIG-----------------------QPFDQPGIWNGPYPSGAPAIFIDQVTR---LGVP 53 (330)
T ss_dssp ----CEEEEESCCEEEEEEEEET-----------------------CCSSSCEEEEEEEEECHHHHHHHHHHH---TTCC
T ss_pred CCC-CCEEEEcceeEEEeccCCC-----------------------CCccccccccCcCCCCHHHHHHHHHHH---CCCc
Confidence 655 6899999999999975321 000001112356889999999999998 4699
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceee-cc-cccccCCcccCCCcchhhhhc
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVA-NL-SAANCYKSEHLKKPENWALVE 156 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~-~~-~~~~~~~~~~~~~~~~~~~l~ 156 (341)
+.++|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.+++.++ +|+|++.. .. ++...++++++.. ..+.
T Consensus 54 ~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~i~~~~~g~~~~~~~~~~~a~~~~~~~~~~~----~~~~ 129 (330)
T 3iq0_A 54 CGIISCVGNDGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDFIFNIKNAACGKLSAQHVDE----NILK 129 (330)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCEEEEEEECC---CEEEEECTTSGGGGCCGGGCCG----GGGT
T ss_pred EEEEEEeCCChHHHHHHHHHHHcCCCeeeEEEcCCCCceEEEEEECCCCCeeEEEeccCChhhhCCHhhCCH----hHhc
Confidence 9999999999999999999999999999885 56678999888776 68884433 22 3555677877764 4688
Q ss_pred cceEEEEecccc--ccCHHHHHHHHHHHHhCCCeEEEeCCch--hHH-HHHHHHHHhhcCCCcEEecCHHHHHHHhhhcC
Q 019448 157 KAKYFYIAGFFL--TVSPDSIQLVAEHAAANNKVFMMNLSAP--FIC-EFFKDALEKVLPYMDYIFGNETEARTFSKVQG 231 (341)
Q Consensus 157 ~~~~v~i~~~~~--~~~~~~~~~~~~~a~~~~~~v~~d~~~~--~~~-~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~ 231 (341)
+++++|++++.+ ..+.+.+..+++.+++++.++++||... .|. ....+.++++++++|++++|++|++.|++.
T Consensus 130 ~~~~v~~sg~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~-- 207 (330)
T 3iq0_A 130 DCTHFHIMGSSLFSFHMVDAVKKAVTIVKANGGVISFDPNIRKEMLDIPEMRDALHFVLELTDIYMPSEGEVLLLSPH-- 207 (330)
T ss_dssp TEEEEEEEGGGCSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGGGSHHHHHHHHHHHHTCSEECCBGGGTTTTCSC--
T ss_pred cCCEEEEechhhcCcchHHHHHHHHHHHHHcCCEEEEcCCCCccccCcHHHHHHHHHHHhhCCEEecCHHHHHHHhCC--
Confidence 999999999865 2234678899999999999999999653 232 235566788999999999999999998763
Q ss_pred CCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCC
Q 019448 232 WETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKP 311 (341)
Q Consensus 232 ~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~ 311 (341)
.+++++++.+ .+.|++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|++
T Consensus 208 ---~~~~~~~~~l------~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~ 275 (330)
T 3iq0_A 208 ---STPERAIAGF------LEEGVKEVIVKRGNQGASYYSANEQFHVESYPV---EEVDPTGAGDCFGGAWIACRQLGFD 275 (330)
T ss_dssp ---SSHHHHHHHH------HHHTCSEEEEECGGGCEEEECSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCC
T ss_pred ---CCHHHHHHHH------HHcCCCEEEEEeCCCceEEEECCceEEecCCCC---ccCCCCChHHHHHHHHHHHHHcCCC
Confidence 5788899988 567899999999999999998888889988765 8999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhccc--cCCCCCCC
Q 019448 312 IEECVRAGCYTSHVIIQRSGC--TYPEKPEF 340 (341)
Q Consensus 312 ~~~a~~~a~~~Aa~~v~~~g~--~~p~~~~~ 340 (341)
+++|+++|+++|+++|++.|+ .+|+.+|+
T Consensus 276 ~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev 306 (330)
T 3iq0_A 276 AHRALQYANACGALAVTRRGPMEGTSRLMEI 306 (330)
T ss_dssp HHHHHHHHHHHHHHHTTSCSSSTTCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHcCcCCCCCCCCHHHH
Confidence 999999999999999999999 66776653
No 16
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=100.00 E-value=1e-46 Score=344.99 Aligned_cols=296 Identities=16% Similarity=0.189 Sum_probs=240.4
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i 84 (341)
++|+|+|++++|++... +++..+..+....+||++.|+|++|++ ||.++.++
T Consensus 3 ~~v~viG~~~~D~~~~~-------------------------~~~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~i 54 (346)
T 3ktn_A 3 LKIAAFGEVMLRFTPPE-------------------------YLMLEQTEQLRMNFVGTGVNLLANLAH---FQLETALI 54 (346)
T ss_dssp CEEEEECCCEEEEECST-------------------------TCCTTTCSCCEEEEECHHHHHHHHHHH---TTCEEEEE
T ss_pred CcEEEeChhhhhhcCCC-------------------------CCcccccceeEEeccCHHHHHHHHHHH---cCCCeEEE
Confidence 57999999999998522 223445677889999999999999998 46999999
Q ss_pred eeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCC-ccceeec----ccccccCCcccCCCcchhhhhccce
Q 019448 85 GCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGG-ERSLVAN----LSAANCYKSEHLKKPENWALVEKAK 159 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g-~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~ 159 (341)
|.+|+|.+|+.+++.|++.||+++++...+.+|+.+++..+++ +++++.+ .++...+++++++ ....+.++|
T Consensus 55 ~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~---~~~~~~~~~ 131 (346)
T 3ktn_A 55 TKLPANRLGEAGKAALRKLGISDQWVGEKGDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYD---FEAFLAEVD 131 (346)
T ss_dssp EEECSSHHHHHHHHHHHHTTCBCTTEEECCSCCEEEEEECCBTTBCCEEEECCCTTSTTTTCCGGGSC---HHHHHTTCS
T ss_pred EecCCCHHHHHHHHHHHHcCCcceEEEeCCCceEEEEEEecCCCCCceEEecCCCCChhhhCChhhcC---hHHHhCCCC
Confidence 9999999999999999999999998866666788887766644 4456555 2455567777765 235689999
Q ss_pred EEEEeccccccCH---HHHHHHHHHHHhCCCeEEEeCC--chhHH----HHHHHHHHhhcCCCcEEecCHHHHHHHhhhc
Q 019448 160 YFYIAGFFLTVSP---DSIQLVAEHAAANNKVFMMNLS--APFIC----EFFKDALEKVLPYMDYIFGNETEARTFSKVQ 230 (341)
Q Consensus 160 ~v~i~~~~~~~~~---~~~~~~~~~a~~~~~~v~~d~~--~~~~~----~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~ 230 (341)
++|++++.+..++ +.+.++++.++++++++++|+. ...|. ....+.++++++++|++++|++|++.|++..
T Consensus 132 ~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~r~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~ 211 (346)
T 3ktn_A 132 MVHICGISLSLTEKTRDAALILAQKAHAYQKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVELLGFI 211 (346)
T ss_dssp EEEECTHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCCHHHHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCC
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHHHHcCCEEEEeCCCChHHcCCccHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCC
Confidence 9999987653333 6788999999999999999995 33343 3345678899999999999999999998753
Q ss_pred -CC---CCCCHHHHHHHHhcCCcccc-CCccEEEEEeCCCc-------eEEEECCeeEEEeceecCCCcccCCCCCchhh
Q 019448 231 -GW---ETDDVEEIALKLSQWPKASE-IRKRTAVITQGADP-------VVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAF 298 (341)
Q Consensus 231 -~~---~~~d~~~~~~~l~~~~~~~~-~~~~~vvvt~G~~G-------~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf 298 (341)
.. +.++.+++++.| .+ .|++.||||+|++| ++++++++.+++|++++ +++|||||||+|
T Consensus 212 ~~~~~~~~~~~~~~~~~l------~~~~g~~~vvvT~G~~G~~~~~~g~~~~~~~~~~~~~~~~v---~vvdttGAGDaF 282 (346)
T 3ktn_A 212 PREDLEGEAQETELIQRF------MSQYNLEWFAGTTRSHSQNQNYLSGYLYTQNEYQQSEKRPL---LNLDRIGAGDAY 282 (346)
T ss_dssp CCTTSCHHHHHHHHHHHH------HHHHTCSEEEEEEEEECSSCEEEEEEEECSSCEEECCCEEC---CCSCCTTHHHHH
T ss_pred CCccccchHHHHHHHHHH------HHhcCCCEEEEecCccccccCcceEEEEECCceEEeCCCcc---ccCCCCchhHHH
Confidence 11 113466777777 44 38899999999998 88888888889998876 789999999999
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHhhhhhhhcccc-CCCCCCC
Q 019448 299 VGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCT-YPEKPEF 340 (341)
Q Consensus 299 ~ag~~~~l~~g~~~~~a~~~a~~~Aa~~v~~~g~~-~p~~~~~ 340 (341)
+|||+++|++|+++++|+++|+++|+++|++.|+. +|+.+|+
T Consensus 283 ~ag~~~~l~~g~~l~~a~~~A~a~aa~~v~~~G~~~~p~~~ev 325 (346)
T 3ktn_A 283 AAGILYGYSQNWSLEKAVTFATVNGVLAHTIQGDIPLTTVKQV 325 (346)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSSSCCCCCHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCCCCCCCCHHHH
Confidence 99999999999999999999999999999999984 6776553
No 17
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=100.00 E-value=1.1e-46 Score=342.08 Aligned_cols=291 Identities=18% Similarity=0.239 Sum_probs=238.8
Q ss_pred CCCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc
Q 019448 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 1 ~~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
|.++++|+|+|++++|++..++ +.|.+++.... .....+||+++|+|++|++ ||.+
T Consensus 3 ~~~~~~v~viG~~~vD~~~~~~--------------------~~~~~g~~~~~-~~~~~~GG~~~NvA~~la~---LG~~ 58 (328)
T 3kzh_A 3 LRKEPYLLVFGASVVDVFGFSK--------------------ASYRPYNSTPG-HVKISFGGVCRNIAENMAR---VGVN 58 (328)
T ss_dssp -CCCCCEEEECCCEEEEEEEES--------------------SCCCTTSEEEE-EEEEEEECHHHHHHHHHHH---TTCC
T ss_pred CCCCCcEEEECcEEeeeeeccC--------------------CCCCCCCCceE-EEEEccCcHHHHHHHHHHH---cCCC
Confidence 3567899999999999999887 34444433333 5678999999999999998 4699
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCcccee-ecccccccCCcccCCCcchhhhhcc
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLV-ANLSAANCYKSEHLKKPENWALVEK 157 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~ 157 (341)
+.++|.+|+|.+|+.+++.|++.||+++++. .++.+|+.++++++ +|+|.+. ...+....++++.+.. ....+..
T Consensus 59 v~~i~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 136 (328)
T 3kzh_A 59 TNFMSILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPTYLAILDENGEMVSAIADMKSIGAMNTDFIDS--KREIFEN 136 (328)
T ss_dssp EEEECEECSSHHHHHHHHHHHHHTEECTTCEECTTCCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHHH--THHHHHT
T ss_pred cEEEEEecCcHHHHHHHHHHHHcCCCccceEEeCCCCCeeEEEEEcCCCCEEEEEEchhhhhhCCHHHHHH--HHHhhcc
Confidence 9999999999999999999999999999874 56667999988887 6888763 3445555666665532 2356889
Q ss_pred ceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCH
Q 019448 158 AKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDV 237 (341)
Q Consensus 158 ~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~ 237 (341)
++++++++. .+ +.+..+++ +++.+.++++|+.+.. ..+.++++++++|++++|++|++.+++....+.+++
T Consensus 137 ~~~~~~~~~---~~-~~~~~l~~-a~~~~~~v~~D~~~~~----~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~ 207 (328)
T 3kzh_A 137 AEYTVLDSD---NP-EIMEYLLK-NFKDKTNFILDPVSAE----KASWVKHLIKDFHTIKPNRHEAEILAGFPITDTDDL 207 (328)
T ss_dssp CSEEEEESS---CH-HHHHHHHH-HHTTTSEEEEECCSHH----HHHTSTTTGGGCSEECCBHHHHHHHHTSCCCSHHHH
T ss_pred CCEEEEeCC---cH-HHHHHHHH-HhhcCCcEEEEeCCHH----HHHHHHHHhcCCcEEeCCHHHHHHHHCCCCCCHHHH
Confidence 999999874 23 67777777 8889999999998643 234466788999999999999999998654334566
Q ss_pred HHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHH
Q 019448 238 EEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVR 317 (341)
Q Consensus 238 ~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~ 317 (341)
+++++.+ .+.|++.+|||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+++++|++
T Consensus 208 ~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~ag~~~~l~~g~~~~~a~~ 278 (328)
T 3kzh_A 208 IKASNYF------LGLGIKKVFISLDADGIFYNDGVSCGKIKATEV---DVKNVTGAGDSFVAGLGYGYMNKMPIEDIVK 278 (328)
T ss_dssp HHHHHHH------HHHTCCEEEEECGGGCEEEECSSCEEEEEESSC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHH------HHhCCCEEEEEeCCCCEEEEeCCceEEecCCCc---ccCCCCChhHHHHHHHHHHHHcCCCHHHHHH
Confidence 7788887 566899999999999999998888888887654 7999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhccccCC
Q 019448 318 AGCYTSHVIIQRSGCTYP 335 (341)
Q Consensus 318 ~a~~~Aa~~v~~~g~~~p 335 (341)
+|+++|+++|++.|+..|
T Consensus 279 ~A~a~aa~~v~~~G~~~~ 296 (328)
T 3kzh_A 279 FAMTMSNITISHEETIHP 296 (328)
T ss_dssp HHHHHHHHHHTSSSSSCT
T ss_pred HHHHHHHHHhcCCCCCCC
Confidence 999999999999998543
No 18
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=100.00 E-value=5.9e-47 Score=340.97 Aligned_cols=276 Identities=19% Similarity=0.235 Sum_probs=238.1
Q ss_pred CCCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc
Q 019448 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 1 ~~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
|+|+++|+|+|++++|++..++ ++|.+++..+.......+||++.|+|++|++ ||.+
T Consensus 16 ~~mm~~i~viG~~~iD~~~~v~--------------------~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~---LG~~ 72 (310)
T 3go6_A 16 GPMAPRVCVVGSVNMDLTFVVD--------------------ALPRPGETVLAASLTRTPGGKGANQAVAAAR---AGAQ 72 (310)
T ss_dssp ---CCEEEEECCCEEEEEEECS--------------------SCCCTTCCCCCSEEEEEEECHHHHHHHHHHH---TTCE
T ss_pred ccccCCEEEECCceEEEEEecC--------------------CCCCCCCeEEecceeecCCCHHHHHHHHHHH---CCCC
Confidence 4567899999999999999887 5677666667778889999999999999998 4699
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccce
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAK 159 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 159 (341)
+.++|.+|+|.+|+.+++.|++.||+++++...+.+|+.++++++ +|+|+++.+.++...++ ++ ...++++|
T Consensus 73 ~~~i~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~--~~-----~~~l~~~~ 145 (310)
T 3go6_A 73 VQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLT--PV-----PSAVANCD 145 (310)
T ss_dssp EEEECEECSSHHHHHHHHHHHHTTCBCTTCEECSSCCEEEEEEECTTSCEEEEEECGGGGGCC--CC-----TTTTTTCS
T ss_pred eEEEEEECCCHHHHHHHHHHHHcCCccceeEecCCCCCEEEEEEcCCCCEEEEecCChhhhHH--HH-----HHHhhcCC
Confidence 999999999999999999999999999988766678999988887 68999888877766665 23 25688999
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHH
Q 019448 160 YFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEE 239 (341)
Q Consensus 160 ~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~ 239 (341)
++++++ ..+.+.+..+++.+++++.++++|+....+ .++.++++++++|++++|++|++.|++.
T Consensus 146 ~v~~~~---~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~---~~~~~~~ll~~~dil~~N~~Ea~~l~g~---------- 209 (310)
T 3go6_A 146 VLLTQL---EIPVATALAAARAAQSADAVVMVNASPAGQ---DRSSLQDLAAIADVVIANEHEANDWPSP---------- 209 (310)
T ss_dssp EEEECS---SSCHHHHHHHHHHHHHTTCEEEEECCSSSC---CHHHHHHHHHHCSEEEEEHHHHHHSSSC----------
T ss_pred EEEECC---CCCHHHHHHHHHHHHHcCCEEEEcCCcccc---chHHHHHHHhhCCEEEeCHHHHHHHhCC----------
Confidence 999975 457889999999999999999999985432 3455778899999999999999987641
Q ss_pred HHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhc----CCCHHHH
Q 019448 240 IALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQ----EKPIEEC 315 (341)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~----g~~~~~a 315 (341)
++.+|||+|++|++++++++.+++|++++ +++||+||||+|+|||+++|++ |+++++|
T Consensus 210 ---------------~~~vvvt~G~~Ga~~~~~~~~~~~~~~~v---~vvdttGAGDaF~ag~~~~l~~~~~~g~~l~~a 271 (310)
T 3go6_A 210 ---------------PTHFVITLGVRGARYVGADGVFEVPAPTV---TPVDTAGAGDVFAGVLAANWPRNPGSPAERLRA 271 (310)
T ss_dssp ---------------CSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHCCSSSCCHHHHHHH
T ss_pred ---------------CCEEEEEECCCCEEEEECCceEEeCCCCC---CcCcCCCchHHHHHHHHHHHHhcccCCCCHHHH
Confidence 36799999999999999998899988765 7899999999999999999999 9999999
Q ss_pred HHHHHHHhhhhhhhccc--cCCCCCCC
Q 019448 316 VRAGCYTSHVIIQRSGC--TYPEKPEF 340 (341)
Q Consensus 316 ~~~a~~~Aa~~v~~~g~--~~p~~~~~ 340 (341)
+++|+++|+++|++.|+ .+|+.+|+
T Consensus 272 ~~~A~~~aa~~v~~~G~~~~~p~~~ev 298 (310)
T 3go6_A 272 LRRACAAGALATLVSGVGDCAPAAAAI 298 (310)
T ss_dssp HHHHHHHHHHHTTSSCSTTCCCCHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCHHHH
Confidence 99999999999999999 67887664
No 19
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=100.00 E-value=7.1e-47 Score=343.29 Aligned_cols=294 Identities=18% Similarity=0.255 Sum_probs=226.6
Q ss_pred CCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEE
Q 019448 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATS 82 (341)
Q Consensus 3 ~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~ 82 (341)
++++|+|+|++++|++...+ +.|. .+..+....+||++.|+|+++++ ||.++.
T Consensus 20 ~~~~v~viG~~~~D~~~~~~--------------------~~p~----~~~~~~~~~~GG~~~NvA~~la~---LG~~~~ 72 (327)
T 3hj6_A 20 GDLDVVSLGEILVDMISTEE--------------------VNSL----SQSREYTRHFGGSPANIAVNLSR---LGKKVA 72 (327)
T ss_dssp --CCEEEESCCEEEEECCCC--------------------CSSG----GGCCEEEEEEECHHHHHHHHHHH---TTCCEE
T ss_pred CCCCEEEEccceEEEeccCC--------------------CCCc----cccceeeeecCcHHHHHHHHHHH---cCCcEE
Confidence 45789999999999998765 3343 25567788999999999999998 469999
Q ss_pred EEeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccceEE
Q 019448 83 YIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYF 161 (341)
Q Consensus 83 ~i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 161 (341)
++|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.+++..++|+++++.+.+++..++++++. ...+.++|++
T Consensus 73 ~ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~v~~~~g~~~~~~~~~a~~~~~~~~~~----~~~~~~~~~v 148 (327)
T 3hj6_A 73 LISRLGADAFGNYLLDVLKGEQIITDGIQQDKERRTTIVYVSKSTRTPDWLPYREADMYLQEDDII----FELIKRSKVF 148 (327)
T ss_dssp EECEEESSHHHHHHHHHHHHTTCBCTTCEEESSSCCCEEEECCCTTCCCEEEECSGGGGCCSCCCH----HHHHC--CEE
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCCcccEEEcCCCCceEEEEEecCCCccEEEecChhhhCChhhcC----HhHhccCCEE
Confidence 99999999999999999999999999885 556678777665567888887777777777776654 2568899999
Q ss_pred EEecccc--ccCHHHHHHHHHHHHhCCCeEEEeCCchh--HH--HHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCC
Q 019448 162 YIAGFFL--TVSPDSIQLVAEHAAANNKVFMMNLSAPF--IC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETD 235 (341)
Q Consensus 162 ~i~~~~~--~~~~~~~~~~~~~a~~~~~~v~~d~~~~~--~~--~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~ 235 (341)
|++++.+ +.+.+.+.++++.++++++++++|+.... |. ....+.+.++++++|++++|++|++.+++. .
T Consensus 149 ~~~g~~l~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~-----~ 223 (327)
T 3hj6_A 149 HLSTFILSRKPARDTAIKAFNYAREQGKIVCFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHLFGP-----D 223 (327)
T ss_dssp EEESHHHHSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCSSSCSHHHHHHHHTTCSEECCBHHHHHHHHTT-----S
T ss_pred EECchHhcCchhHHHHHHHHHHHHHCCCEEEEECCCchhhcCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCC-----C
Confidence 9998753 23567889999999999999999997432 21 112456788999999999999999999874 3
Q ss_pred CHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHH
Q 019448 236 DVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEEC 315 (341)
Q Consensus 236 d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a 315 (341)
+++++++.+ .+.|++.+|||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+++++|
T Consensus 224 ~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~ag~~~~l~~g~~~~~a 294 (327)
T 3hj6_A 224 SPENYVKRY------LELGVKAVILTLGEEGVIASDGEEIIRIPAFSE---DAVDVTGAGDAFWSGFICGLLDGYTVKRS 294 (327)
T ss_dssp CSSGGGGGG------TTTTCSEEEEECSTTCEEEECSSCEEESCSSTT---C-----CCHHHHHHHHHHTTSSCSTTHHH
T ss_pred CHHHHHHHH------HhCCCCEEEEEECCCceEEEeCCeeEEcCCccc---ccCCCcChhHHHHHHHHHHHHcCCCHHHH
Confidence 455667766 567899999999999999998888888887654 89999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhccc--cCCCCCCCC
Q 019448 316 VRAGCYTSHVIIQRSGC--TYPEKPEFN 341 (341)
Q Consensus 316 ~~~a~~~Aa~~v~~~g~--~~p~~~~~~ 341 (341)
+++|+++|+++|++.|+ .+|+.+|+.
T Consensus 295 ~~~A~a~aa~~v~~~G~~~~~p~~~ev~ 322 (327)
T 3hj6_A 295 IKLGNGVAAFKIRGVGALSPVPSKEDII 322 (327)
T ss_dssp HHHHHCCCSSCC----------------
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCHHHHH
Confidence 99999999999999998 688988863
No 20
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=100.00 E-value=1.1e-45 Score=334.43 Aligned_cols=294 Identities=20% Similarity=0.236 Sum_probs=240.1
Q ss_pred CCCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc
Q 019448 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 1 ~~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
||++++|+++|++++|++...+ ..|. .+..+....+||++.|+|+++++ ||.+
T Consensus 5 ~~~~~~v~~iG~~~~D~~~~~~--------------------~~p~----~~~~~~~~~~GG~~~NvA~~la~---LG~~ 57 (319)
T 3pl2_A 5 LTSTHEVLAIGRLGVDIYPLQS--------------------GVGL----ADVQSFGKYLGGSAANVSVAAAR---HGHN 57 (319)
T ss_dssp --CCCSEEEESCCEEEECBSSS--------------------SCCG----GGCCCBCCEEECHHHHHHHHHHH---TTCC
T ss_pred cccCCCEEEEChhheeeecccC--------------------CCCc----cccceeeecCCCcHHHHHHHHHH---CCCc
Confidence 7888899999999999998664 2333 13566788999999999999998 4699
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeecc--cc-cccCCcccCCCcchhhhh
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANL--SA-ANCYKSEHLKKPENWALV 155 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l 155 (341)
+.++|.+|+|.+|+.+++.|+++||+++++. .++.+|+.+++.++ +|++.++.+. ++ ...++++++.. ..+
T Consensus 58 ~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~----~~~ 133 (319)
T 3pl2_A 58 SALLSRVGNDPFGEYLLAELERLGVDNQYVATDQTFKTPVTFCEIFPPDDFPLYFYREPKAPDLNIESADVSL----DDV 133 (319)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHTTEECTTEEEESSSCCCEEEECCBTTTBCCEEEECCSCCGGGGCCGGGSCH----HHH
T ss_pred eEEEEEeCCCHHHHHHHHHHHHcCCccccEEecCCCCceEEEEEEcCCCCeeEEEecCCCcccccCChhhCCH----HHh
Confidence 9999999999999999999999999999885 56678888877665 6777766553 33 45677777753 668
Q ss_pred ccceEEEEeccccccC--HHHHHHHHHHHHhCCCeEEEeCC--chhHH--HHHHHHHHhhcCCCcEEecCHHHHHHHhhh
Q 019448 156 EKAKYFYIAGFFLTVS--PDSIQLVAEHAAANNKVFMMNLS--APFIC--EFFKDALEKVLPYMDYIFGNETEARTFSKV 229 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~--~~~~~~~~~~a~~~~~~v~~d~~--~~~~~--~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~ 229 (341)
.+++++|++++.+... .+.+..+++.+++ +.++++|+. ...|. ....+.++++++++|++++|++|++.+++.
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 212 (319)
T 3pl2_A 134 READILWFTLTGFSEEPSRGTHREILTTRAN-RRHTIFDLDYRPMFWESPEEATKQAEWALQHSTVAVGNKEECEIAVGE 212 (319)
T ss_dssp HHCSEEEEEGGGGSSTTHHHHHHHHHHHHTT-CSCEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEECHHHHHHHHSC
T ss_pred ccCCEEEEecccccCchhHHHHHHHHHHHHH-CCcEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEEcCHHHHHHHcCC
Confidence 8999999999864332 3456666666665 556678875 22332 234566889999999999999999999873
Q ss_pred cCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcC
Q 019448 230 QGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE 309 (341)
Q Consensus 230 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g 309 (341)
.+++++++.+ .+.|++.+|||+|++|++++++++.+++|++++ +++||+||||+|+|||+++|++|
T Consensus 213 -----~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g 278 (319)
T 3pl2_A 213 -----TEPERAGRAL------LERGVELAIVKQGPKGVMAMTKDETVEVPPFFV---DVINGLGAGDAFGGALCHGLLSE 278 (319)
T ss_dssp -----CSHHHHHHHH------HHTTCSEEEEEEETTEEEEECSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTT
T ss_pred -----CCHHHHHHHH------HhcCCCEEEEEECCCCeEEEECCceEEeCCccc---CCCCCcCchHHHHHHHHHHHHcC
Confidence 5788889988 667899999999999999998888889988765 79999999999999999999999
Q ss_pred CCHHHHHHHHHHHhhhhhhhccc--cCCCCCCC
Q 019448 310 KPIEECVRAGCYTSHVIIQRSGC--TYPEKPEF 340 (341)
Q Consensus 310 ~~~~~a~~~a~~~Aa~~v~~~g~--~~p~~~~~ 340 (341)
+++++|+++|+++|+++|++.|+ .+|+.+|+
T Consensus 279 ~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev 311 (319)
T 3pl2_A 279 WPLEKVLRFANTAGALVASRLECSTAMPTTDEV 311 (319)
T ss_dssp CCHHHHHHHHHHHHHHHHTSSCSGGGCCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhccCCcCCCCCHHHH
Confidence 99999999999999999999997 57887664
No 21
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=100.00 E-value=3.8e-47 Score=340.75 Aligned_cols=276 Identities=20% Similarity=0.242 Sum_probs=239.8
Q ss_pred CceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEE
Q 019448 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~ 83 (341)
+++|+|+|++++|++..++ ++|.+++..........+||++.|+|+++++ ||.++.+
T Consensus 2 ~~~i~viG~~~iD~~~~~~--------------------~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~---lG~~~~~ 58 (299)
T 3ikh_A 2 SLRVYVTGNITVDETWSIP--------------------DIPKKGASIHGVKVSQDIGGKGANQAIILSR---CGIETRL 58 (299)
T ss_dssp CCCEEEECCCEEEEEEECS--------------------SCCCTTCEEECEEEEEEEECHHHHHHHHHHH---TTCCEEE
T ss_pred CceEEEECceEEEEEEecC--------------------CCCCCCCeEEeeeeeeccCCHHHHHHHHHHH---CCCCeEE
Confidence 4579999999999999887 5666666666667889999999999999998 4699999
Q ss_pred EeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccceEEE
Q 019448 84 IGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFY 162 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 162 (341)
+|.+|+|.+|+.+++.|++.||+++++...+.+|+.++++++ +|+|+++.+.+++..++++++.. ..+.+.++++++
T Consensus 59 i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~T~~~~~~~~~~g~~~~~~~~~a~~~l~~~~~~~--~~~~~~~~~~v~ 136 (299)
T 3ikh_A 59 IAATGNDSNGAWIRQQIKNEPLMLLPDGHFNQHSDTSIILNSADGDNAIITTTAAADTFSLDEMIP--HMADAVAGDILL 136 (299)
T ss_dssp ECCCCSSHHHHHHHHHGGGSSCEEESSSCCSSCCEEEEEECSSSCSCEEEEECHHHHHCCHHHHGG--GGTTCCTTCEEE
T ss_pred EEEECCCHHHHHHHHHHHHcCCceeeeEecCCCCcEEEEEEcCCCCeEEEEeCCccccCCHHHHHH--HHhhhccCCEEE
Confidence 999999999999999999999999998766678999988886 78998888878777888877653 235678999999
Q ss_pred EeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHH
Q 019448 163 IAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIAL 242 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~ 242 (341)
+++ ..+.+.+..+++.+++++.++++|+.... +.+.++++++|++++|++|++.|++
T Consensus 137 ~~g---~~~~~~~~~~~~~a~~~g~~v~~D~~~~~------~~~~~ll~~~dil~~N~~E~~~l~g-------------- 193 (299)
T 3ikh_A 137 QQG---NFSLDKTRALFQYARSRGMTTVFNPSPVN------PDFCHLWPLIDIAVVNESEAELLQP-------------- 193 (299)
T ss_dssp ECS---CSCHHHHHHHHHHHHHTTCEEEECCCSCC------GGGGGCGGGCSEEEEEHHHHHHHCC--------------
T ss_pred ECC---CCCHHHHHHHHHHHHHcCCEEEEccccch------hhHHHHHhhCCEEEecHHHHHHHhc--------------
Confidence 986 35678899999999999999999997642 2356789999999999999998753
Q ss_pred HHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHH-HHHHHHhcCCCHHH-HHHHHH
Q 019448 243 KLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG-GFLSQLVQEKPIEE-CVRAGC 320 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~a-g~~~~l~~g~~~~~-a~~~a~ 320 (341)
.+++.+|||+|++|++++++++.+++|++++ +++||+||||+|+| ||+++|++|+++++ |+++|+
T Consensus 194 ----------~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaf~a~~~~~~l~~g~~~~~~a~~~a~ 260 (299)
T 3ikh_A 194 ----------YGVKTLVITQGAAGAWLVQEGQRQFCPAVPA---EALDTTGAGDTFLAVMLASALLRGVAPDALALAHAS 260 (299)
T ss_dssp ----------CSCSEEEEECGGGCEEEECSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHHTTSSSCHHHHHHHH
T ss_pred ----------CCCCEEEEEECCCceEEEeCCceEEeCCCCC---ccCCCCCchHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 2578999999999999998888889988765 88999999999999 99999999999999 999999
Q ss_pred HHhhhhhhhcccc--CCCCCCC
Q 019448 321 YTSHVIIQRSGCT--YPEKPEF 340 (341)
Q Consensus 321 ~~Aa~~v~~~g~~--~p~~~~~ 340 (341)
++|+++|++.|+. +|+.+|+
T Consensus 261 ~~aa~~v~~~G~~~~~p~~~ev 282 (299)
T 3ikh_A 261 RAAAITVSRRGTLSAFPGSREL 282 (299)
T ss_dssp HHHHHHHHSSSSTTTSCCHHHH
T ss_pred HHHHHHhCCCcccccCCCHHHH
Confidence 9999999999984 6877654
No 22
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=100.00 E-value=3.8e-45 Score=331.80 Aligned_cols=288 Identities=18% Similarity=0.239 Sum_probs=237.2
Q ss_pred CCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcE
Q 019448 2 AQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGAT 81 (341)
Q Consensus 2 ~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v 81 (341)
+++++|+|+|++++|++.... + ......+||+++|+|+++++|. .|.++
T Consensus 21 ~~m~~i~viG~~~iD~~~~~~----------------------~--------~~~~~~~GG~~~NvA~~la~Lg-~G~~~ 69 (328)
T 4e69_A 21 QSMMHILSIGECMAELAPADL----------------------P--------GTYRLGFAGDTFNTAWYLARLR-PESRI 69 (328)
T ss_dssp BSSCEEEEESCCEEEEEECSS----------------------T--------TEEEEEEECHHHHHHHHHHHHC-TTSEE
T ss_pred ccCCcEEEecCcEEEEecCCC----------------------C--------CceEEecCCHHHHHHHHHHhcC-CCCcE
Confidence 455789999999999997421 0 3457899999999999999832 25999
Q ss_pred EEEeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEeCCccceeecccccc---cCCcccCCCcchhhhhcc
Q 019448 82 SYIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVVGGERSLVANLSAAN---CYKSEHLKKPENWALVEK 157 (341)
Q Consensus 82 ~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~ 157 (341)
.++|.+|+|.+|+.+++.|++.||+++++. .++.+|+.+++.+++|+|+++.+.+... .+++.++ ....+.+
T Consensus 70 ~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~v~~~~g~r~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 145 (328)
T 4e69_A 70 SYFSAIGDDALSQQMRAAMSAAGIDGGGLRVIPGRTVGLYLITLEQGERSFAYWRGQSAARELAGDADA----LAAAMAR 145 (328)
T ss_dssp EEECEECSSHHHHHHHHHHHHTTEECTTCEECTTCCCEEEEEEEETTEEEEEEECTTCGGGGTTSCHHH----HHHHHTT
T ss_pred EEEEeeCCCHHHHHHHHHHHHcCCccceEEEcCCCCCeEEEEEecCCceEEEEeCCCCHHHhhcCcccc----chHHhcC
Confidence 999999999999999999999999999875 4556799988888888998877655422 1222222 1256889
Q ss_pred ceEEEEeccccc----cCHHHHHHHHHHHHhCCCeEEEeCC--chhHH--HHHHHHHHhhcCCCcEEecCHHHHHHHhhh
Q 019448 158 AKYFYIAGFFLT----VSPDSIQLVAEHAAANNKVFMMNLS--APFIC--EFFKDALEKVLPYMDYIFGNETEARTFSKV 229 (341)
Q Consensus 158 ~~~v~i~~~~~~----~~~~~~~~~~~~a~~~~~~v~~d~~--~~~~~--~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~ 229 (341)
+|+++++++.+. .+.+.+.++++.++++++++++||. +..|. ....+.++++++++|++++|++|++.|++.
T Consensus 146 ~~~v~~~g~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~ 225 (328)
T 4e69_A 146 ADVVYFSGITLAILDQCGRATLLRALAQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDEAAWFGD 225 (328)
T ss_dssp CSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCHHHHHHHHHHHHTTCSEECCBHHHHHHHHTC
T ss_pred CCEEEECCchhhccCchHHHHHHHHHHHHHhCCCEEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEeCCHHHHHHHcCC
Confidence 999999987542 2346788999999999999999994 33331 335566788999999999999999999873
Q ss_pred cCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcC
Q 019448 230 QGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE 309 (341)
Q Consensus 230 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g 309 (341)
++++++++.+ .+.|++.||||+|++|++++++++.+++|+++ .++++||+||||+|+|||+++|++|
T Consensus 226 -----~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~--~~~vvdttGAGDaf~a~~~~~l~~g 292 (328)
T 4e69_A 226 -----AGPDATADRY------ARAGVRSVVVKNGPHAVHFLQDGRRGRVPVPP--VAQVVDTTAAGDSFNAGLLDSVLAG 292 (328)
T ss_dssp -----SSHHHHHHHH------HTTTCSEEEEBCTTSCEEEEETTEEEEECCCC--CCSCCCCTTHHHHHHHHHHHHHHTT
T ss_pred -----CCHHHHHHHH------HhcCCCEEEEEeCCCCeEEEeCCceEEecCCC--CCCccCCCChhHHHHHHHHHHHHCC
Confidence 4788999998 66789999999999999999999888888764 2489999999999999999999999
Q ss_pred CCHHHHHHHHHHHhhhhhhhccccCCCC
Q 019448 310 KPIEECVRAGCYTSHVIIQRSGCTYPEK 337 (341)
Q Consensus 310 ~~~~~a~~~a~~~Aa~~v~~~g~~~p~~ 337 (341)
+++++|+++|+++|+++|++.|+..|..
T Consensus 293 ~~l~~a~~~A~~~aa~~v~~~Ga~~p~~ 320 (328)
T 4e69_A 293 QPLETAIAAAAALAGQVVQGKGALVEVP 320 (328)
T ss_dssp CCHHHHHHHHHHHHHHHHTSSSSSCCC-
T ss_pred CCHHHHHHHHHHHHHHHHccCCCcCChh
Confidence 9999999999999999999999988765
No 23
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=100.00 E-value=1.4e-45 Score=334.45 Aligned_cols=299 Identities=22% Similarity=0.332 Sum_probs=238.1
Q ss_pred CCC-CceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCC
Q 019448 1 MAQ-EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPG 79 (341)
Q Consensus 1 ~~~-~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~ 79 (341)
|+| +++|+|+|++++|++.....+. +...+++|. .+....+||+++|+|+++++ ||.
T Consensus 1 m~m~~~~v~~iG~~~~D~~~~~~~~~------------~~~~~~~p~-------~~~~~~~GG~~~NvA~~la~---LG~ 58 (325)
T 3h49_A 1 MSLDNLDVICIGAAIVDIPLQPVSKN------------IFDVDSYPL-------ERIAMTTGGDAINEATIISR---LGH 58 (325)
T ss_dssp ----CEEEEEESCCEEEEEECSCCGG------------GGGSSCCCC-------SCCCCEEESHHHHHHHHHHH---TTC
T ss_pred CCCCCCeEEEEChhhheeeccCCCCc------------cccccccch-------heeEEccCcHHHHHHHHHHH---CCC
Confidence 555 6799999999999976432110 111112221 45678999999999999998 569
Q ss_pred cEEEEeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeecccc-cccCCcccCCCcchhhhhc
Q 019448 80 ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSA-ANCYKSEHLKKPENWALVE 156 (341)
Q Consensus 80 ~v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~ 156 (341)
++.++|.+|+|.+|+.+++.|++.||+++++. .++.+|+.++++++ +|+|+++.+.+. ...++++++.. ..+.
T Consensus 59 ~~~~ig~vG~D~~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~----~~~~ 134 (325)
T 3h49_A 59 RTALMSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDF----ARFS 134 (325)
T ss_dssp EEEEECEEESSHHHHHHHHHHHHHTCBCSSCEEETTSCCCEEEEEECTTSCEEEECCTTSHHHHCCGGGCCG----GGGG
T ss_pred CeEEEEEECCChHHHHHHHHHHHcCCceeeEEecCCCCCceEEEEECCCCceeEEeccCcccccCChhhcCh----hhhc
Confidence 99999999999999999999999999999875 45678999888886 789988776543 34577777653 5688
Q ss_pred cceEEEEeccccc--cCHHHHHHHHHHHHhCCCeEEEe-CCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCC
Q 019448 157 KAKYFYIAGFFLT--VSPDSIQLVAEHAAANNKVFMMN-LSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWE 233 (341)
Q Consensus 157 ~~~~v~i~~~~~~--~~~~~~~~~~~~a~~~~~~v~~d-~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~ 233 (341)
+++++|++++... .+.+.+..+++.+++++..++.+ +++..|. ..+.+.++++++|++++|++|++.|++.
T Consensus 135 ~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~d~~~~~~~~~--~~~~~~~~l~~~dil~~N~~E~~~l~g~---- 208 (325)
T 3h49_A 135 QAKLLSLASIFNSPLLDGKALTEIFTQAKARQMIICADMIKPRLNE--TLDDICEALSYVDYLFPNFAEAKLLTGK---- 208 (325)
T ss_dssp GCSEEEEEEETTSTTSCHHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHHHHTTCSEEECBHHHHHHHHTC----
T ss_pred cCCEEEEecccCCcccCHHHHHHHHHHHHhcCCEEEecCCchhhhh--HHHHHHHHHhhCCEEecCHHHHHHHhCC----
Confidence 9999999986532 34578899999999998654433 3333221 2344678899999999999999999873
Q ss_pred CCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHH
Q 019448 234 TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIE 313 (341)
Q Consensus 234 ~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~ 313 (341)
.+++++++.+ .+.|++.||||+|++|++++++++.+++|+++. .+++|||||||+|+|||+++|++|++++
T Consensus 209 -~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~--~~vvDttGAGDaf~ag~~~~l~~g~~~~ 279 (325)
T 3h49_A 209 -ETLDEIADCF------LACGVKTVVIKTGKDGCFIKRGDMTMKVPAVAG--ITAIDTIGAGDNFASGFIAALLEGKNLR 279 (325)
T ss_dssp -SSHHHHHHHH------HTTTCSEEEEECTTSCEEEEETTEEEEECCCSS--CCCSCCTTHHHHHHHHHHHHHHTTCCHH
T ss_pred -CCHHHHHHHH------HHcCCCEEEEEeCCCCeEEEECCeEEEecCcCC--CCCcCCCChhHHHHHHHHHHHHcCCCHH
Confidence 4788888888 667899999999999999999988888887653 3789999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhhccc--cCCCCCCC
Q 019448 314 ECVRAGCYTSHVIIQRSGC--TYPEKPEF 340 (341)
Q Consensus 314 ~a~~~a~~~Aa~~v~~~g~--~~p~~~~~ 340 (341)
+|+++|+++|+++|++.|+ .+|+.+|+
T Consensus 280 ~a~~~A~~~aa~~v~~~G~~~~~p~~~ev 308 (325)
T 3h49_A 280 ECARFANATAAISVLSVGATTGVKNRKLV 308 (325)
T ss_dssp HHHHHHHHHHHHHHTSSSSSSSCSSSHHH
T ss_pred HHHHHHHHHHHHHHcccCCCCCCCCHHHH
Confidence 9999999999999999997 47887653
No 24
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=100.00 E-value=7.8e-46 Score=332.81 Aligned_cols=286 Identities=20% Similarity=0.288 Sum_probs=236.3
Q ss_pred CCCC-ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCC
Q 019448 1 MAQE-GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPG 79 (341)
Q Consensus 1 ~~~~-~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~ 79 (341)
|+++ ++|+++|++++|++..++ ++|..++..........+||+++|+|+++++ ||.
T Consensus 1 ~~~~m~~i~viG~~~iD~~~~~~--------------------~~p~~~~~~~~~~~~~~~GG~~~N~A~~la~---LG~ 57 (302)
T 2c4e_A 1 MGGKMEKITCVGHTALDYIFNVE--------------------KFPEPNTSIQIPSARKYYGGAAANTAVGIKK---LGV 57 (302)
T ss_dssp -CCCEEEEEEESCCEEEEEEECS--------------------SCCCTTCCCCCSCEEEEEECHHHHHHHHHHH---TTC
T ss_pred CCCCcCcEEEECceeEEEEeccc--------------------ccCCCCceeeecceeecCCCHHHHHHHHHHH---CCC
Confidence 4444 489999999999999887 4566666566677888999999999999998 469
Q ss_pred cEEEEeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhcc
Q 019448 80 ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEK 157 (341)
Q Consensus 80 ~v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 157 (341)
++.++|.+|+|.+|+.+++.|++.||+++++. .++.+|+.++++++ +|+|+++.+.+++..++++++.. .+
T Consensus 58 ~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~ 130 (302)
T 2c4e_A 58 NSELLSCVGYDFKNSGYERYLKNLDINISKLYYSEEEETPKAWIFTDKDNNQITFFLWGAAKHYKELNPPN-------FN 130 (302)
T ss_dssp EEEEECEECTTTTTSHHHHHHHHTTCBCTTCEECSSSCCCEEEEEECSSCCEECCEECGGGGGGGGCCCCC-------CC
T ss_pred ceEEEEEEeCCCchHHHHHHHHHcCCcccceEeeCCCCCceEEEEECCCCCEEEEEeCChhhhCCHhhcCc-------cc
Confidence 99999999999999999999999999998774 45667999988886 68888887777776777776642 68
Q ss_pred ceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCH
Q 019448 158 AKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDV 237 (341)
Q Consensus 158 ~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~ 237 (341)
++++|+++. .++.+..+++.+++++ ++++|+....+. ...+.++++++++|++++|++|++.|++.... +.
T Consensus 131 ~~~v~~~~~----~~~~~~~~~~~a~~~g-~v~~D~~~~~~~-~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~---~~ 201 (302)
T 2c4e_A 131 TEIVHIATG----DPEFNLKCAKKAYGNN-LVSFDPGQDLPQ-YSKEMLLEIIEHTNFLFMNKHEFERASNLLNF---EI 201 (302)
T ss_dssp EEEEEECSS----CHHHHHHHHHHHBTTB-EEEECCGGGGGG-CCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTC---CH
T ss_pred CCEEEEeCC----CcHHHHHHHHHHHhcC-CEEEeCchhhhh-hhHHHHHHHHhcCCEEEcCHHHHHHHhCCCCc---cH
Confidence 999999863 3488899999999999 999999743211 12355678899999999999999999875321 11
Q ss_pred HHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCc-ccCCCCCchhhHHHHHHHHhcCCCHHHHH
Q 019448 238 EEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDK-LVDTNGAGDAFVGGFLSQLVQEKPIEECV 316 (341)
Q Consensus 238 ~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~-~vd~tGAGDaf~ag~~~~l~~g~~~~~a~ 316 (341)
. ++ .+. ++.+|||+|++|++++++++.+++|++++ + ++||+||||+|+|||+++|++|+++++|+
T Consensus 202 ~----~l------~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~~vdt~GAGDaf~a~~~~~l~~g~~~~~a~ 267 (302)
T 2c4e_A 202 D----DY------LER-VDALIVTKGSKGSVIYTKDKKIEIPCIKA---GKVIDPTGAGDSYRAGFLSAYVKGYDLEKCG 267 (302)
T ss_dssp H----HH------HTT-CSEEEEECGGGCEEEECSSCEEEECCCCC---SCCSCCTTHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred H----HH------Hhc-CCEEEEEECCCceEEEeCCcEEEeCCccC---CcCCcCCCchHHHHHHHHHHHHcCCCHHHHH
Confidence 1 44 445 78999999999999998888888887755 6 89999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhccc--cCCCCCC
Q 019448 317 RAGCYTSHVIIQRSGC--TYPEKPE 339 (341)
Q Consensus 317 ~~a~~~Aa~~v~~~g~--~~p~~~~ 339 (341)
++|+++|++++++.|+ .+|+.+|
T Consensus 268 ~~a~~~aa~~~~~~G~~~~~p~~~e 292 (302)
T 2c4e_A 268 LIGAATASFVVEAKGCQTNLPTWDK 292 (302)
T ss_dssp HHHHHHHHHHTTSSSSSTTCCCHHH
T ss_pred HHHHHHHHHHHccccccccCCCHHH
Confidence 9999999999999998 4677654
No 25
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=100.00 E-value=2e-44 Score=327.97 Aligned_cols=297 Identities=19% Similarity=0.250 Sum_probs=237.4
Q ss_pred CCCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc
Q 019448 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 1 ~~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
|+++++|+|+|++++|++...+ ..|. .........+||++.|+|+++++ ||.+
T Consensus 8 ~~~~~~i~viG~~~~D~~~~~~--------------------~~~~----~~~~~~~~~~GG~~~NvA~~la~---LG~~ 60 (332)
T 2qcv_A 8 TDREFDLIAIGRACIDLNAVEY--------------------NRPM----EETMTFSKYVGGSPANIVIGSSK---LGLK 60 (332)
T ss_dssp SCCSEEEEEESCCEEEEEESSC--------------------SSCG----GGCCCEEEEEESHHHHHHHHHHH---TTCC
T ss_pred cccCCcEEEECcceEEEecCCC--------------------CCCc----cccceeEecCCCHHHHHHHHHHH---cCCc
Confidence 5667799999999999998653 2222 23456788999999999999998 4699
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeeecC--CCCceeEEEEEe-CCccceeecc--cccccCCcccCCCcchhhhh
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDE--SASTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKKPENWALV 155 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~--~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~l 155 (341)
+.++|.+|+|.+|+.+++.|++.||+++++... ..+|+.+++.++ +|+++++.+. +++..++++++.. ..+
T Consensus 61 ~~~i~~vG~D~~G~~l~~~L~~~gV~~~~v~~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~a~~~l~~~~~~~----~~~ 136 (332)
T 2qcv_A 61 AGFIGKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNE----AYI 136 (332)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCCEEEEEEEETTEEEEEEECTTCGGGGCCGGGCCH----HHH
T ss_pred eEEEEEeCCCHHHHHHHHHHHHcCCCCcceEecCCCCCceEEEEEEcCCCCccEEEECCcchhhhCCHhHCCH----HHH
Confidence 999999999999999999999999999988543 346888877654 6777665443 3455677777653 457
Q ss_pred ccceEEEEeccccc--cCHHHHHHHHHHHHhCCCeEEEeCCch--hHH--HHHHHHHHhhcCCCcEEecCHHHHHHHhhh
Q 019448 156 EKAKYFYIAGFFLT--VSPDSIQLVAEHAAANNKVFMMNLSAP--FIC--EFFKDALEKVLPYMDYIFGNETEARTFSKV 229 (341)
Q Consensus 156 ~~~~~v~i~~~~~~--~~~~~~~~~~~~a~~~~~~v~~d~~~~--~~~--~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~ 229 (341)
++++++|++++.+. .+.+.+..+++.+++++.++++|+... .|. ....+.++++++++|++++|++|++.|++.
T Consensus 137 ~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~ 216 (332)
T 2qcv_A 137 RRSKLLLVSGTALSKSPSREAVLKAIRLAKRNDVKVVFELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLENR 216 (332)
T ss_dssp TTEEEEEEEGGGGSSTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHHHCSEEEEEHHHHHHHTTC
T ss_pred ccCCEEEEeCccccCchhHHHHHHHHHHHHHCCCEEEEcCcCchhhcCCHHHHHHHHHHHHHhCCEEEccHHHHHHHhCC
Confidence 89999999987642 234778899999999999999999642 221 223455677899999999999999999875
Q ss_pred cCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEEC-CeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhc
Q 019448 230 QGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQD-GKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQ 308 (341)
Q Consensus 230 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~-~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~ 308 (341)
.. .++..++++++ .+.|++.+|||+|++|++++++ ++.+++|++++ +++||+||||+|+|||+++|++
T Consensus 217 ~~--~~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v---~vvdt~GAGDaf~a~~~~~l~~ 285 (332)
T 2qcv_A 217 TE--KGDNDETIRYL------FKHSPELIVIKHGVEGSFAYTKAGEAYRGYAYKT---KVLKTFGAGDSYASAFLYALIS 285 (332)
T ss_dssp SS--CCCHHHHHHHH------TTSSCSEEEEECGGGCEEEEETTSCEEEECCBCC---CCSCCTTHHHHHHHHHHHHHHT
T ss_pred Cc--CCCHHHHHHHH------HHcCCCEEEEEECCcceEEEecCCceEEcCCCCc---cccCCCCcHHHHHHHHHHHHHc
Confidence 32 24677888888 6678999999999999999987 66788887755 7899999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhhhhhhcccc--CCCCCC
Q 019448 309 EKPIEECVRAGCYTSHVIIQRSGCT--YPEKPE 339 (341)
Q Consensus 309 g~~~~~a~~~a~~~Aa~~v~~~g~~--~p~~~~ 339 (341)
|+++++|+++|+++|++++++.|+. +|+.+|
T Consensus 286 g~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~e 318 (332)
T 2qcv_A 286 GKGIETALKYGSASASIVVSKHSSSDAMPSVEE 318 (332)
T ss_dssp TCCHHHHHHHHHHHHHHHHHC-----CCCCHHH
T ss_pred CCCHHHHHHHHHHHHHHHHccCCCccCCCCHHH
Confidence 9999999999999999999999984 777655
No 26
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=2.1e-45 Score=332.26 Aligned_cols=292 Identities=21% Similarity=0.243 Sum_probs=233.6
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i 84 (341)
++|+|+|++++|++..++ +.|.+++.... .....+||++.|+|+++++ ||.++.++
T Consensus 4 ~~i~viG~~~~D~~~~~~--------------------~~~~~~~~~~~-~~~~~~GG~~~NvA~~la~---LG~~~~~i 59 (317)
T 2nwh_A 4 KKILVLGGAHIDRRGMIE--------------------TETAPGASNPG-SWMEEAGGGGFNAARNLSR---LGFEVRII 59 (317)
T ss_dssp CEEEEESCCEEEEEEEES--------------------SSCCTTSCCCE-EEEEEEECHHHHHHHHHHH---TTCEEEEE
T ss_pred CeEEEECchheEEeeccC--------------------CCCCCCCCceE-eEEEeCCcHHHHHHHHHHh---cCCCcEEE
Confidence 589999999999999876 22333332222 2678999999999999998 46999999
Q ss_pred eeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEe-CCccceeecc-cccccCCcccCCCcchhhhhccceEEE
Q 019448 85 GCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANL-SAANCYKSEHLKKPENWALVEKAKYFY 162 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~v~ 162 (341)
|.+|+|.+|+.+++.|+++||+++++..++.+|+.++++++ +|++++.... +....++++.+........+..+++++
T Consensus 60 ~~vG~D~~G~~l~~~L~~~gV~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 139 (317)
T 2nwh_A 60 APRGGDVTGEVVAEAARQAGVEDTPFTFLDRRTPSYTAILERDGNLVIALADMDLYKLFTPRRLKVRAVREAIIASDFLL 139 (317)
T ss_dssp CEEESSHHHHHHHHHHHHTTCEECCEEETTSCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHTSHHHHHHHHHCSEEE
T ss_pred EeecCCchHHHHHHHHHHcCCCCCCcccCCCCCceEEEEEcCCCCEEEEEcchHHHhhCCHHHhhhhhhhhHhccCCEEE
Confidence 99999999999999999999999986566778999988886 6888765443 344557776655311114678899999
Q ss_pred EeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHH
Q 019448 163 IAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIAL 242 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~ 242 (341)
+++ ..+.+.+..+++.+++++.++++||.... ..+.++++++++|++++|++|++.|++. +.++++++++
T Consensus 140 ~~~---~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~----~~~~~~~ll~~~dil~~N~~E~~~l~g~---~~~~~~~~~~ 209 (317)
T 2nwh_A 140 CDA---NLPEDTLTALGLIARACEKPLAAIAISPA----KAVKLKAALGDIDILFMNEAEARALTGE---TAENVRDWPN 209 (317)
T ss_dssp EET---TSCHHHHHHHHHHHHHTTCCEEEECCSHH----HHGGGTTTGGGCSEEEEEHHHHHHHHC--------CTTHHH
T ss_pred EeC---CCCHHHHHHHHHHHHhcCCeEEEeCCCHH----HHHHHHHHhhhCeEecCCHHHHHHHhCC---ChhHHHHHHH
Confidence 975 34678899999999999999999998532 1234567889999999999999999874 2345567777
Q ss_pred HHhcCCccccCCccEEEEEeCCCceEEEECC-eeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHH
Q 019448 243 KLSQWPKASEIRKRTAVITQGADPVVVAQDG-KLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCY 321 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~-~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~ 321 (341)
.+ .+.|++.||||+|++|+++++++ ..+++|++++ +++||+||||+|+|||+++|++|+++++|+++|++
T Consensus 210 ~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v---~~vdt~GAGDaf~a~~~~~l~~g~~~~~a~~~A~~ 280 (317)
T 2nwh_A 210 IL------RKAGLSGGVVTRGASEVVAFNGTEKAILHPPLIR---EVKDVTGAGDAMASGYLAAIAEGKTIREALRQGAA 280 (317)
T ss_dssp HH------HHTTCCCEEEEETTTEEEEECSSCEEEECCCCSS---SCSCCCCSSHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HH------HHcCCCEEEEEECCCcEEEEcCCCceEEeCCCCc---cccCCCChhHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 77 56688999999999999998766 4577777654 89999999999999999999999999999999999
Q ss_pred Hhhhhhhhcccc--CCCCCC
Q 019448 322 TSHVIIQRSGCT--YPEKPE 339 (341)
Q Consensus 322 ~Aa~~v~~~g~~--~p~~~~ 339 (341)
+|+++|++.|+. +|+.++
T Consensus 281 ~aa~~v~~~G~~~~~~~~~~ 300 (317)
T 2nwh_A 281 AAAITVQSSFATSQDLSKDS 300 (317)
T ss_dssp HHHHHHSSTTCCGGGCCHHH
T ss_pred HHHHHHcCCCCCCCCCCHHH
Confidence 999999999995 456544
No 27
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=100.00 E-value=6.5e-45 Score=327.92 Aligned_cols=293 Identities=19% Similarity=0.189 Sum_probs=240.2
Q ss_pred CCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEE
Q 019448 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATS 82 (341)
Q Consensus 3 ~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~ 82 (341)
|++.+++.+++.+|+++.++ ++ .+++..+..+....+||++.|+|+++++ ||.++.
T Consensus 1 m~~i~~v~~n~~~D~~~~v~--------------------~~-~~g~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~ 56 (309)
T 3umo_A 1 MVRIYTLTLAPSLDSATITP--------------------QI-YPEGKLRCTAPVFEPGGGGINVARAIAH---LGGSAT 56 (309)
T ss_dssp CCCEEEECSSCEEEEEEEES--------------------CC-CSSSEEECCCCEEEEESHHHHHHHHHHH---TTCCEE
T ss_pred CCcEEEEecchhheEEEEcC--------------------cc-cCCCeEEeceeeecCCchHHHHHHHHHH---cCCCeE
Confidence 34456666889999999998 34 4566667778889999999999999998 469999
Q ss_pred EEeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEe--CCccceeecccccccCCcccCCC-cchhhhhccce
Q 019448 83 YIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV--GGERSLVANLSAANCYKSEHLKK-PENWALVEKAK 159 (341)
Q Consensus 83 ~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~ 159 (341)
++|.+|+| +|+.+++.|+++||+++++...+ +|+.++.+.+ +|+++++...++ .++++++.. .+....+..++
T Consensus 57 ~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~~~~~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~ 132 (309)
T 3umo_A 57 AIFPAGGA-TGEHLVSLLADENVPVATVEAKD-WTRQNLHVHVEASGEQYRFVMPGA--ALNEDEFRQLEEQVLEIESGA 132 (309)
T ss_dssp EEEEECHH-HHHHHHHHHHHTTCCEEEEECSS-CCCCCEEEEETTTCCEEEEECCCC--CCCHHHHHHHHHHHTTSCTTC
T ss_pred EEEEecCc-hHHHHHHHHHHcCCceEEEEecC-CCeeEEEEEECCCCcEEEEEcCCC--CCCHHHHHHHHHHHHhcCCCC
Confidence 99999999 99999999999999999986543 4666655554 578877766664 366655532 01112246788
Q ss_pred EEEEecccc-ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCC--cEEecCHHHHHHHhhhcCCCCCC
Q 019448 160 YFYIAGFFL-TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYM--DYIFGNETEARTFSKVQGWETDD 236 (341)
Q Consensus 160 ~v~i~~~~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~--dvl~~n~~E~~~l~~~~~~~~~d 236 (341)
+++++++.. ..+.+.+.++++.++++++++++|+... .+.+++++. |++++|++|++.+++....+.++
T Consensus 133 ~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~v~~D~~~~--------~l~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~ 204 (309)
T 3umo_A 133 ILVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGE--------ALSAALAIGNIELVKPNQKELSALVNRELTQPDD 204 (309)
T ss_dssp EEEEESCCCTTCCHHHHHHHHHHHHHTTCEEEEECCHH--------HHHHHTSSCCBSEECCBHHHHHHHHTSCCCSTTH
T ss_pred EEEEEccCCCCCCHHHHHHHHHHHHhcCCEEEEECCcH--------HHHHHhccCCCeEEEeCHHHHHHHhCCCCCCHHH
Confidence 999998643 4567899999999999999999999743 266788874 99999999999999865445567
Q ss_pred HHHHHHHHhcCCccccCCc-cEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHH
Q 019448 237 VEEIALKLSQWPKASEIRK-RTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEEC 315 (341)
Q Consensus 237 ~~~~~~~l~~~~~~~~~~~-~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a 315 (341)
..++++.+ .+.+. +.+|||+|++|++++++++.+++|++++ +++|++||||+|+|||+++|++|+++++|
T Consensus 205 ~~~~~~~l------~~~g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGD~f~a~~~~~l~~g~~~~~a 275 (309)
T 3umo_A 205 VRKAAQEI------VNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPV---KSQSTVGAGDSMVGAMTLKLAENASLEEM 275 (309)
T ss_dssp HHHHHHHH------HHTTSBSCEEEECGGGCEEEECSSCEEEECCCSC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHH------HHcCCCcEEEEEcCcccEEEEECCcEEEEeCCCc---CCCCCcChHHHHHHHHHHHHHcCCCHHHH
Confidence 88888888 56665 7899999999999998888888888654 89999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhccccCCCCCCC
Q 019448 316 VRAGCYTSHVIIQRSGCTYPEKPEF 340 (341)
Q Consensus 316 ~~~a~~~Aa~~v~~~g~~~p~~~~~ 340 (341)
+++|+++|+++|++.|+.+|+.+|+
T Consensus 276 ~~~A~~~aa~~v~~~G~~~~~~~ev 300 (309)
T 3umo_A 276 VRFGVAAGSAATLNQGTRLCSHDDT 300 (309)
T ss_dssp HHHHHHHHHHHTTSSTTCCCCHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCCCHHHH
Confidence 9999999999999999998887664
No 28
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=4.5e-45 Score=329.05 Aligned_cols=287 Identities=23% Similarity=0.341 Sum_probs=241.0
Q ss_pred CCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc-E
Q 019448 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA-T 81 (341)
Q Consensus 3 ~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~-v 81 (341)
|-++|+|+|++++|+++.++ ++|.+++..+..+....+||++.|+|+++++| |.+ +
T Consensus 13 ~~~~v~vvG~~~iD~~~~~~--------------------~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~L---G~~~~ 69 (311)
T 1vm7_A 13 MFLVISVVGSSNIDIVLKVD--------------------HFTKPGETQKAIEMNVFPGGKGANQAVTVAKI---GEKGC 69 (311)
T ss_dssp CCCCEEEECCCEEEEEEECS--------------------SCCCTTCEEECSEEEEEEECHHHHHHHHHHHH---HSSCE
T ss_pred ccCCEEEECcceeeEEEecc--------------------cCCCCCceEecCeeeecCCCHHHHHHHHHHHc---CCCce
Confidence 45689999999999999987 56666666677778889999999999999983 489 9
Q ss_pred EEEeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccce
Q 019448 82 SYIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAK 159 (341)
Q Consensus 82 ~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 159 (341)
.++|.+|+|.+|+.+++.|++.|| ++. .++.+|+.++++++ +|+++++.+.++...++++++. ...+.+++
T Consensus 70 ~~i~~vG~D~~G~~l~~~L~~~gV---~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~~~~~~----~~~~~~~~ 142 (311)
T 1vm7_A 70 RFVTCIGNDDYSDLLIENYEKLGI---TGYIRVSLPTGRAFIEVDKTGQNRIIIFPGANAELKKELID----WNTLSESD 142 (311)
T ss_dssp EEEEEECSSHHHHHHHHHHHHTTE---EEEEECSSCCCEEEEEECTTSCEEEEEECGGGGGCCGGGCC----HHHHTTCS
T ss_pred EEEEEECCChHHHHHHHHHHHCCC---EEEEcCCCCCeEEEEEECCCCCEEEEEecCccccCCHHHhC----hhhcccCC
Confidence 999999999999999999999999 453 45678999988887 5889888877777778887775 35678999
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHH
Q 019448 160 YFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEE 239 (341)
Q Consensus 160 ~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~ 239 (341)
++++++. .+.+.+..+ +++.+.++++||... .+...++++++|++++|++|++.|++....+.+++.+
T Consensus 143 ~v~~~~~---~~~~~~~~~---a~~~~~~v~~Dp~~~------~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~ 210 (311)
T 1vm7_A 143 ILLLQNE---IPFETTLEC---AKRFNGIVIFDPAPA------QGINEEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEK 210 (311)
T ss_dssp EEEECSS---SCHHHHHHH---HHHCCSEEEECCCSC------TTCCGGGGGGCSEECCBHHHHHHHHHHHHSCCCCHHH
T ss_pred EEEEeCC---CCHHHHHHH---HHHcCCEEEEeCcch------hhhhHHHHhhCCEEeCCHHHHHHHhCCCCCChhHHHH
Confidence 9999753 345544443 788899999999752 1224578899999999999999998754334567888
Q ss_pred HHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHH
Q 019448 240 IALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAG 319 (341)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a 319 (341)
+++.+ .+.|++.||||+|++|++++++++.+++|++++ +++||+||||+|+|||+++|++|+++++|+++|
T Consensus 211 ~~~~l------~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~~vdttGAGDaf~a~~~~~l~~g~~~~~a~~~A 281 (311)
T 1vm7_A 211 AAEKF------LELGVKNVIVKLGDKGVLLVNKNEKKHFPTFKV---KAVDTTAAGDVFNGAFAVALSEGKNPEEAVIFG 281 (311)
T ss_dssp HHHHH------HHTTCSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHH------HHcCCCEEEEEECCCCeEEEeCCceEEecCCCc---ccCCCCccHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 89888 667899999999999999998888888887654 789999999999999999999999999999999
Q ss_pred HHHhhhhhhhccc--cCCCCCCC
Q 019448 320 CYTSHVIIQRSGC--TYPEKPEF 340 (341)
Q Consensus 320 ~~~Aa~~v~~~g~--~~p~~~~~ 340 (341)
+++|+.++++.|+ .+|+.+|+
T Consensus 282 ~~~aa~~v~~~G~~~~~p~~~ev 304 (311)
T 1vm7_A 282 TAAAAISVTRLGAQSSIPAREEV 304 (311)
T ss_dssp HHHHHHHTTSSSSGGGCCCHHHH
T ss_pred HHHHHHHhCcCCccccCCCHHHH
Confidence 9999999999998 47876653
No 29
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=100.00 E-value=6.5e-45 Score=328.47 Aligned_cols=284 Identities=19% Similarity=0.251 Sum_probs=231.4
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
+|+|+|++++|++...+ ++..+..+....+||++.|+|+++++ ||.++.++|
T Consensus 3 ~v~viG~~~~D~~~~~~-------------------------~~~~~~~~~~~~~GG~~~N~A~~la~---LG~~~~~i~ 54 (313)
T 2v78_A 3 DVIALGEPLIQFNSFNP-------------------------GPLRFVNYFEKHVAGSELNFCIAVVR---NHLSCSLIA 54 (313)
T ss_dssp CEEEECCCEEEEEESSS-------------------------SCGGGCCEEEEEEECHHHHHHHHHHH---TTCCEEEEE
T ss_pred eEEEECcceEEEecCCC-------------------------CcccccceeEecCCChHHHHHHHHHH---CCCcEEEEE
Confidence 79999999999987332 12334566788999999999999998 469999999
Q ss_pred eeecCchhHHHHHHHHhcCcceeeeec-CCCCceeEEEE--Ee-CCccceeecc--cccccCCcccCCCcchhhhhccce
Q 019448 86 CIGKDKFGEEMKKNSKLAGVNVHYYED-ESASTGTCAVC--VV-GGERSLVANL--SAANCYKSEHLKKPENWALVEKAK 159 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~-~~~~t~~~~~~--~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~ 159 (341)
.+|+|.+|+.+++.|++.||+++++.. ++.+|+.+++. ++ +|+|+++.+. ++...++++++.. ..+++++
T Consensus 55 ~vG~D~~g~~~~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~~~g~~~~~~~~~~~a~~~l~~~~~~~----~~~~~~~ 130 (313)
T 2v78_A 55 RVGNDEFGKNIIEYSRAQGIDTSHIKVDNESFTGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDINE----NYVRNSR 130 (313)
T ss_dssp EEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCCEEEEEESSSSTTCEEEEEECTTCSGGGCCGGGCCH----HHHHTSS
T ss_pred EeCCCHHHHHHHHHHHHcCCcCceEEEcCCCCceEEEEEEecCCCCCeeEEEeCCcChhHhCChhhCCH----HHhcCCC
Confidence 999999999999999999999998754 55689998877 65 6777765443 4556787777753 4578999
Q ss_pred EEEEeccccc---cCHHHHHHHHHHHHhCCCeEEEeCCc--hhHH--HHHHHHHHhhcCCCc--EEecCHHHHHHHhhhc
Q 019448 160 YFYIAGFFLT---VSPDSIQLVAEHAAANNKVFMMNLSA--PFIC--EFFKDALEKVLPYMD--YIFGNETEARTFSKVQ 230 (341)
Q Consensus 160 ~v~i~~~~~~---~~~~~~~~~~~~a~~~~~~v~~d~~~--~~~~--~~~~~~~~~~l~~~d--vl~~n~~E~~~l~~~~ 230 (341)
++|++++.+. .+.+.+.++++.++++ ++|+.. ..|. ...++.++++++++| ++++|++|++.|++
T Consensus 131 ~v~~~g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~~l~~~d~~il~~N~~E~~~l~g-- 204 (313)
T 2v78_A 131 LVHSTGITLAISDNAKEAVIKAFELAKSR----SLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKILLD-- 204 (313)
T ss_dssp EEEEEHHHHHHCHHHHHHHHHHHHHCSSE----EEECCCCGGGSSCHHHHHHHHHHHHHHSCEEEEEECHHHHHHHHS--
T ss_pred EEEEcCchhhcChHHHHHHHHHHHHHHHh----CcCCcCChhhcCCHHHHHHHHHHHHHhcCeeEEECcHHHHHHHhC--
Confidence 9999987642 2346667777766654 667743 3332 234556778899999 99999999999987
Q ss_pred CCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCC
Q 019448 231 GWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK 310 (341)
Q Consensus 231 ~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~ 310 (341)
.++++++++++ .+.|++.+|||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+
T Consensus 205 ---~~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~~~~l~~g~ 272 (313)
T 2v78_A 205 ---VTDPDEAYRKY------KELGVKVLLYKLGSKGAIAYKDNVKAFKDAYKV---PVEDPTGAGDAMAGTFVSLYLQGK 272 (313)
T ss_dssp ---CCCHHHHHHHH------HHTTEEEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTC
T ss_pred ---CCCHHHHHHHH------HhCCCCEEEEEECCCCcEEeeCCcEEEeCCCcC---CccCCCCchHHHHHHHHHHHHcCC
Confidence 35788888888 567889999999999999998888888888755 789999999999999999999999
Q ss_pred CHHHHHHHHHHHhhhhhhhcccc--CCCCCC
Q 019448 311 PIEECVRAGCYTSHVIIQRSGCT--YPEKPE 339 (341)
Q Consensus 311 ~~~~a~~~a~~~Aa~~v~~~g~~--~p~~~~ 339 (341)
++++|+++|+++|+++|++.|+. +|+.+|
T Consensus 273 ~~~~a~~~a~~~aa~~v~~~G~~~~~~~~~~ 303 (313)
T 2v78_A 273 DIEYSLAHGIAASTLVITVRGDNELTPTLED 303 (313)
T ss_dssp CHHHHHHHHHHHHHHHHTSSSSSTTCCCHHH
T ss_pred CHHHHHHHHHHHHHHHhccCCCCCCCCCHHH
Confidence 99999999999999999999995 576654
No 30
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=100.00 E-value=1.9e-44 Score=326.72 Aligned_cols=291 Identities=19% Similarity=0.182 Sum_probs=231.9
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i 84 (341)
++|+|+|++++|++..++ + |..++..+..+....+||++.|+|+++++ ||.++.++
T Consensus 3 m~i~v~g~~~~D~~~~v~--------------------~-~~~g~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~~ 58 (323)
T 2f02_A 3 LIVTVTMNPSIDISYLLD--------------------H-LKLDTVNRTSQVTKTPGGKGLNVTRVIHD---LGGDVIAT 58 (323)
T ss_dssp CEEEEESSCEEEEEEECS--------------------C-CCTTSEEEESCEEEEEESHHHHHHHHHHH---HTCCEEEE
T ss_pred eEEEEecCceeEEEEecC--------------------C-cccCCEEEeceEEEcCCcHHHHHHHHHHH---cCCCeEEE
Confidence 489999999999999987 3 44555555667788999999999999998 35999999
Q ss_pred eeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCc--chhhhhccceEEE
Q 019448 85 GCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKP--ENWALVEKAKYFY 162 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~v~ 162 (341)
|.+|+ .+|+.+++.|++.||+++++...+ .|+.++.+++.++++.+...++ .++++++... .....+.++|+++
T Consensus 59 ~~vG~-~~G~~i~~~L~~~gV~~~~v~~~~-~t~~~~~~~~~~~~~~~~~~g~--~l~~~~~~~~~~~~~~~~~~~~~v~ 134 (323)
T 2f02_A 59 GVLGG-FHGAFIANELKKANIPQAFTSIKE-ETRDSIAILHEGNQTEILEAGP--TVSPEEISNFLENFDQLIKQAEIVT 134 (323)
T ss_dssp EEEEH-HHHHHHHHHHHHTTCCBCCEEESS-CCEEEEEEEETTEEEEEEECCC--BCCHHHHHHHHHHHHHHHTTCSEEE
T ss_pred EEecc-chHHHHHHHHHHCCCceeEEEcCC-CCeeEEEEEcCCCeEEEECCCC--CCCHHHHHHHHHHHHHhccCCCEEE
Confidence 99997 599999999999999999886544 4777777776445554444342 4565554320 1113468899999
Q ss_pred Eecccc-ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhc---CCCcEEecCHHHHHHHhhhcCC-CC-CC
Q 019448 163 IAGFFL-TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVL---PYMDYIFGNETEARTFSKVQGW-ET-DD 236 (341)
Q Consensus 163 i~~~~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l---~~~dvl~~n~~E~~~l~~~~~~-~~-~d 236 (341)
++++.+ ..+.+.+..+++.+++++.++++||.... +++++ +++|++++|++|++.|++.... +. ++
T Consensus 135 ~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~--------~~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~ 206 (323)
T 2f02_A 135 ISGSLAKGLPSDFYQELVQKAHAQEVKVLLDTSGDS--------LRQVLQGPWKPYLIKPNLEELEGLLGQDFSENPLAA 206 (323)
T ss_dssp EESCCCBTSCTTHHHHHHHHHHHTTCEEEEECCTHH--------HHHHHHSSCCCSEECCBHHHHHHHHTCCCCSSCHHH
T ss_pred EECCCCCCCChHHHHHHHHHHHHCCCEEEEECChHH--------HHHHHhccCCCeEEecCHHHHHHHhCCCCCCCcHHH
Confidence 988654 24567889999999999999999997542 33344 6999999999999999875321 12 34
Q ss_pred HHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHH
Q 019448 237 VEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECV 316 (341)
Q Consensus 237 ~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~ 316 (341)
+.++++++ .+.|++.+|||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+++++|+
T Consensus 207 ~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~a~~~~~l~~g~~~~~a~ 277 (323)
T 2f02_A 207 VQTALTKP------MFAGIEWIVISLGKDGAIAKHHDQFYRVKIPTI---QAKNPVGSGDATIAGLAYGLAKDAPAAELL 277 (323)
T ss_dssp HHHHHTSG------GGTTCSEEEEECGGGCEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHH------HHcCCCEEEEeecCCceEEEeCCCEEEEcCCCc---cccCCccHHHHHHHHHHHHHHcCCCHHHHH
Confidence 55566666 567899999999999999998888888887654 889999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhccccCCCCCCC
Q 019448 317 RAGCYTSHVIIQRSGCTYPEKPEF 340 (341)
Q Consensus 317 ~~a~~~Aa~~v~~~g~~~p~~~~~ 340 (341)
++|+++|+++|++.|+.+|+.+|+
T Consensus 278 ~~A~~~aa~~v~~~G~~~~~~~ev 301 (323)
T 2f02_A 278 KWGMAAGMANAQERMTGHVDVENV 301 (323)
T ss_dssp HHHHHHHHHHHHSSSSSCCCHHHH
T ss_pred HHHHHHHHHHHcCCCcCCCCHHHH
Confidence 999999999999999988876653
No 31
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=100.00 E-value=2.3e-44 Score=327.03 Aligned_cols=290 Identities=17% Similarity=0.202 Sum_probs=231.3
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
.++++|++++|++..+++ + ..++..+.......+||+++|+|+++++ ||.++.++|
T Consensus 22 i~~v~G~~~~D~~~~~~~--------------------~-~~g~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~i~ 77 (330)
T 2jg1_A 22 ILTLTLNPSVDISYPLTA--------------------L-KLDDVNRVQEVSKTAGGKGLNVTRVLAQ---VGEPVLASG 77 (330)
T ss_dssp EEEEESSCEEEEEEEESC--------------------C-CTTSEEEESCCEEEEECHHHHHHHHHHH---HTCCEEEEE
T ss_pred EEEEecchhheEEEecCC--------------------c-cCCceEEeceEEEcCCchHHHHHHHHHH---hCCCeEEEE
Confidence 678999999999999872 2 3334444466788999999999999998 359999999
Q ss_pred eeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCc--chhhhhccceEEEE
Q 019448 86 CIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKP--ENWALVEKAKYFYI 163 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~v~i 163 (341)
.+|+ .+|+.+++.|++.||+++++...+ .|+.++.+++.++++.+...++ .+++++++.. .....++++|++|+
T Consensus 78 ~vG~-~~G~~l~~~L~~~gV~~~~v~~~~-~t~~~~~~v~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~v~~ 153 (330)
T 2jg1_A 78 FIGG-ELGQFIAKKLDHADIKHAFYNIKG-ETRNCIAILHEGQQTEILEQGP--EIDNQEAAGFIKHFEQMMEKVEAVAI 153 (330)
T ss_dssp EEEH-HHHHHHHHHHHHTTCEECCEEESS-CCEEEEEEEETTEEEEEEECCC--BCCHHHHHHHHHHHHHHGGGCSEEEE
T ss_pred Eecc-hhHHHHHHHHHHCCCceeEEEccC-CCeeEEEEEeCCCcEEEECCCC--CCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 9997 699999999999999999986544 4777777777555554444332 4555554320 01134688999999
Q ss_pred ecccc-ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC---CCcEEecCHHHHHHHhhhcCC-CCCCHH
Q 019448 164 AGFFL-TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP---YMDYIFGNETEARTFSKVQGW-ETDDVE 238 (341)
Q Consensus 164 ~~~~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~---~~dvl~~n~~E~~~l~~~~~~-~~~d~~ 238 (341)
+++.+ ..+.+.+..+++.+++++.++++|+... .++++++ ++|++++|++|++.|++.... +.+++.
T Consensus 154 ~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~--------~l~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~ 225 (330)
T 2jg1_A 154 SGSLPKGLNQDYYAQIIERCQNKGVPVILDCSGA--------TLQTVLENPYKPTVIKPNISELYQLLNQPLDESLESLK 225 (330)
T ss_dssp ESCCCBTSCTTHHHHHHHHHHTTTCCEEEECCHH--------HHHHHHTSSSCCSEECCBHHHHHHHTTSCCCCCHHHHH
T ss_pred ECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCcH--------HHHHHHhccCCceEEEeCHHHHHHHhCCCCCCCHHHHH
Confidence 88654 3456789999999999999999999743 2455665 899999999999999874321 123455
Q ss_pred HHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHH
Q 019448 239 EIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRA 318 (341)
Q Consensus 239 ~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~ 318 (341)
++++.+ .+.|++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+++++|+++
T Consensus 226 ~~~~~l------~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~~~~l~~g~~l~~al~~ 296 (330)
T 2jg1_A 226 QAVSQP------LFEGIEWIIVSLGAQGAFAKHNHTFYRVNIPTI---SVLNPVGSGDSTVAGITSAILNHENDHDLLKK 296 (330)
T ss_dssp HHHHSG------GGTTCSEEEEECGGGCEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHH------HHcCCCEEEEeecCCceEEEeCCCEEEEeCCCc---cccCCCcHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 666666 567899999999999999998888888887654 89999999999999999999999999999999
Q ss_pred HHHHhhhhhhhccccCCCCCCC
Q 019448 319 GCYTSHVIIQRSGCTYPEKPEF 340 (341)
Q Consensus 319 a~~~Aa~~v~~~g~~~p~~~~~ 340 (341)
|+++|+++|++.|+.+|+.+|+
T Consensus 297 A~a~aa~~v~~~G~~~~~~~ev 318 (330)
T 2jg1_A 297 ANTLGMLNAQEAQTGYVNLNNY 318 (330)
T ss_dssp HHHHHHHHHTSSSSSCCCGGGH
T ss_pred HHHHHHHHhcCcCCCCCCHHHH
Confidence 9999999999999988887764
No 32
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=100.00 E-value=2.1e-44 Score=324.83 Aligned_cols=284 Identities=19% Similarity=0.229 Sum_probs=231.6
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i 84 (341)
++|+|+|++++|++...+ ++..+..+....+||++.|+|+++++ ||.++.++
T Consensus 2 ~~v~viG~~~~D~~~~~~-------------------------~~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~~ 53 (311)
T 2dcn_A 2 AKLITLGEILIEFNALSP-------------------------GPLRHVSYFEKHVAGSEANYCVAFIK---QGNECGII 53 (311)
T ss_dssp CEEEEESCCEEEEEESSS-------------------------SCGGGCCEEEEEEECHHHHHHHHHHH---TTCEEEEE
T ss_pred CCEEEECCceEEEecCCC-------------------------CcccccceeeecCCChHHHHHHHHHH---CCCceEEE
Confidence 479999999999987332 12244566788999999999999998 46999999
Q ss_pred eeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCc--cceeecc--cccccCCcccCCCcchhhhhccc
Q 019448 85 GCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGE--RSLVANL--SAANCYKSEHLKKPENWALVEKA 158 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~--~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~ 158 (341)
|.+|+|.+|+.+++.|++.||+++++. .++.+|+.+++.++ +|+ |+++.+. ++...++++++.. ..+.++
T Consensus 54 ~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~~~----~~~~~~ 129 (311)
T 2dcn_A 54 AKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDE----EYVKSA 129 (311)
T ss_dssp CEEESSHHHHHHHHHHHHTTCBCTTCEEETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCH----HHHTTC
T ss_pred EEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEECCCCCccceEEEecCcChhhhCChhhcCh----HHHcCC
Confidence 999999999999999999999999875 45668988888776 677 7765443 4556787777653 457899
Q ss_pred eEEEEeccccc---cCHHHHHHHHHHHHhCCCeEEEeCCc--hhHH-HHHHHHHHhhcC--CCcEEecCHHHHHHHhhhc
Q 019448 159 KYFYIAGFFLT---VSPDSIQLVAEHAAANNKVFMMNLSA--PFIC-EFFKDALEKVLP--YMDYIFGNETEARTFSKVQ 230 (341)
Q Consensus 159 ~~v~i~~~~~~---~~~~~~~~~~~~a~~~~~~v~~d~~~--~~~~-~~~~~~~~~~l~--~~dvl~~n~~E~~~l~~~~ 230 (341)
+++|++++.+. .+.+.+.++++.++++ ++|+.. ..|. ....+.++++++ ++|++++|++|++.|++
T Consensus 130 ~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~l~~~~~dil~~N~~E~~~l~g-- 203 (311)
T 2dcn_A 130 DLVHSSGITLAISSTAKEAVYKAFEIASNR----SFDTNIRLKLWSAEEAKREILKLLSKFHLKFLITDTDDSKIILG-- 203 (311)
T ss_dssp SEEEEEHHHHHSCHHHHHHHHHHHHHCSSE----EEECCCCTTTSCHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHS--
T ss_pred CEEEEeCcccccChHHHHHHHHHHHHHHHh----CcCccCchhhCChHHHHHHHHHHHhhcCCcEEECCHHHHHHHhC--
Confidence 99999987642 2346677777776655 667753 3342 223456778899 99999999999999987
Q ss_pred CCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCC
Q 019448 231 GWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK 310 (341)
Q Consensus 231 ~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~ 310 (341)
.++++++++++ .+. ++.+|||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+
T Consensus 204 ---~~~~~~~~~~l------~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~ 270 (311)
T 2dcn_A 204 ---ESDPDKAAKAF------SDY-AEIIVMKLGPKGAIVYYDGKKYYSSGYQV---PVEDVTGAGDALGGTFLSLYYKGF 270 (311)
T ss_dssp ---CCCHHHHHHHH------TTT-EEEEEEEEETTEEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHTTTC
T ss_pred ---CCCHHHHHHHH------HHh-CCEEEEEECCCCcEEEeCCcEEEeCCccc---cccCCCCchHHHHHHHHHHHHcCC
Confidence 35788888888 566 88999999999999999888888887755 799999999999999999999999
Q ss_pred CHHHHHHHHHHHhhhhhhhcccc--CCCCCC
Q 019448 311 PIEECVRAGCYTSHVIIQRSGCT--YPEKPE 339 (341)
Q Consensus 311 ~~~~a~~~a~~~Aa~~v~~~g~~--~p~~~~ 339 (341)
++++|+++|+++|++++++.|+. +|+.+|
T Consensus 271 ~~~~a~~~a~~~aa~~v~~~G~~~~~~~~~~ 301 (311)
T 2dcn_A 271 EMEKALDYAIVASTLNVMIRGDQENLPTTKD 301 (311)
T ss_dssp CHHHHHHHHHHHHHHHTTSSSSSTTCCCHHH
T ss_pred CHHHHHHHHHHHHHHHhccCCCCCCCCCHHH
Confidence 99999999999999999999985 577654
No 33
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=100.00 E-value=7.4e-45 Score=331.41 Aligned_cols=285 Identities=19% Similarity=0.294 Sum_probs=224.6
Q ss_pred CCCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc
Q 019448 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 1 ~~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
||++.+|+|+|++++|++... .......+||+++|+|+++++ ||.+
T Consensus 21 ~~~m~~ilviG~~~~D~~~~~-------------------------------~~~~~~~~GG~~~NvA~~la~---LG~~ 66 (339)
T 1tyy_A 21 MKAMNKVWVIGDASVDLVPEK-------------------------------QNSYLKCPGGASANVGVCVAR---LGGE 66 (339)
T ss_dssp ----CCEEEESCCEEEEEECS-------------------------------SSEEEEEEECHHHHHHHHHHH---TTCC
T ss_pred ccccCCEEEECcceeEEeccC-------------------------------CCceEEcCCCHHHHHHHHHHH---cCCC
Confidence 566679999999999998742 133467999999999999998 4699
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeeec-CCCCceeEEEEEe-CCccceeecc--cccccCCcccCCCcchhhhhc
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYED-ESASTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKKPENWALVE 156 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~-~~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~ 156 (341)
+.++|.+|+|.+|+.+++.|++.||+++++.. ++.+|+.+++.++ +|+|++..+. +++..++++.. ..+.
T Consensus 67 ~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~------~~l~ 140 (339)
T 1tyy_A 67 CGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQDL------PPFR 140 (339)
T ss_dssp EEEEEEECSSHHHHHHHHHHHTTTEECTTEEECTTSCCCEEEEC-------CEEECCSSCGGGGCCGGGC------CCCC
T ss_pred eEEEEeeCCCHHHHHHHHHHHHcCCCchheEecCCCCCeEEEEEEcCCCCeEEEEecCCChhhhCCcchh------hHhc
Confidence 99999999999999999999999999998854 5667888877766 6888765543 45445555422 3477
Q ss_pred cceEEEEecccc--ccCHHHHHHHHHHHHhCCCeEEEeCCch--hHH--HHHHHHHHhhcCCCcEEecCHHHHHHHhhhc
Q 019448 157 KAKYFYIAGFFL--TVSPDSIQLVAEHAAANNKVFMMNLSAP--FIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQ 230 (341)
Q Consensus 157 ~~~~v~i~~~~~--~~~~~~~~~~~~~a~~~~~~v~~d~~~~--~~~--~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~ 230 (341)
++|+++++++.+ ..+.+.+..+++.+++++.++++|+... .|. ....+.++++++++|++++|++|++.|++.
T Consensus 141 ~~~~v~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~- 219 (339)
T 1tyy_A 141 QYEWFYFSSIGLTDRPAREACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGA- 219 (339)
T ss_dssp TTCEEEEEHHHHSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHHCC-
T ss_pred cCCEEEEcchhhcCcccHHHHHHHHHHHHHcCCEEEEeCCCCccccCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCC-
Confidence 899999988653 2345778899999999999999999632 221 123455778899999999999999999873
Q ss_pred CCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcC-
Q 019448 231 GWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE- 309 (341)
Q Consensus 231 ~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g- 309 (341)
++++++++++ .+.|++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|
T Consensus 220 ----~~~~~~~~~l------~~~g~~~VvvT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~~~~l~~g~ 286 (339)
T 1tyy_A 220 ----SHWQDARYYL------RDLGCDTTIISLGADGALLITAEGEFHFPAPRV---DVVDTTGAGDAFVGGLLFTLSRAN 286 (339)
T ss_dssp ----SSGGGGSSTT------GGGTCSCEEEECGGGCEEEESSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHTTSS
T ss_pred ----CCHHHHHHHH------HHcCCCEEEEEECCCceEEEeCCceEEcCCCCC---CcCCCCCchHHHHHHHHHHHHhcc
Confidence 3455666655 566889999999999999998888888887654 79999999999999999999997
Q ss_pred ----CCHHHHHHHHHHHhhhhhhhccc--cCCCCCC
Q 019448 310 ----KPIEECVRAGCYTSHVIIQRSGC--TYPEKPE 339 (341)
Q Consensus 310 ----~~~~~a~~~a~~~Aa~~v~~~g~--~~p~~~~ 339 (341)
+++++|+++|+++|+++|++.|+ .+|+.+|
T Consensus 287 ~~~~~~l~~a~~~A~a~aa~~v~~~G~~~~~p~~~e 322 (339)
T 1tyy_A 287 CWDHALLAEAISNANACGAMAVTAKGAMTALPFPDQ 322 (339)
T ss_dssp SCCHHHHHHHHHHHHHHHHHGGGSSSTTTTCCCHHH
T ss_pred ccccccHHHHHHHHHHHHHHHhCCCCCCCCCCCHHH
Confidence 89999999999999999999998 5576654
No 34
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=100.00 E-value=6.2e-44 Score=321.50 Aligned_cols=281 Identities=20% Similarity=0.282 Sum_probs=227.9
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
+|+++|++++|++...+ ++..+..+....+||++.|+|+++++ ||.++.++|
T Consensus 3 ~i~viG~~~~D~~~~~~-------------------------~~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~~~ 54 (309)
T 1v1a_A 3 EVVTAGEPLVALVPQEP-------------------------GHLRGKRLLEVYVGGAEVNVAVALAR---LGVKVGFVG 54 (309)
T ss_dssp SEEEESCCEEEEECSSS-------------------------SCGGGCCEEEEEEECHHHHHHHHHHH---HTCCEEEEE
T ss_pred cEEEEccceEEEecCCC-------------------------CcccchheeeeecCcHHHHHHHHHHH---cCCCeEEEE
Confidence 79999999999986332 12234556778999999999999998 359999999
Q ss_pred eeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeecc--cccccCCcccCCCcchhhhhccceEE
Q 019448 86 CIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKKPENWALVEKAKYF 161 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~v 161 (341)
.+|+|.+|+.+++.|++.||+++++. .++ +|+.+++..+ +|+++++.+. ++...++++++.. ..+.+++++
T Consensus 55 ~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~-~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~v 129 (309)
T 1v1a_A 55 RVGEDELGAMVEERLRAEGVDLTHFRRAPG-FTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDP----DYLEGVRFL 129 (309)
T ss_dssp EECSSHHHHHHHHHHHHHTCBCTTEEECSS-CCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCG----GGGTTCSEE
T ss_pred EeCCCHHHHHHHHHHHHcCCCCceEEEcCC-CCEEEEEEECCCCCceEEEeCCCChhhhCCHhhCCh----hHhcCCCEE
Confidence 99999999999999999999999885 445 8888887775 6777765443 4556777777653 457899999
Q ss_pred EEeccccc---cCHHHHHHHHHHHHhCCCeEEEeCCc--hhHH-HHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCC
Q 019448 162 YIAGFFLT---VSPDSIQLVAEHAAANNKVFMMNLSA--PFIC-EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETD 235 (341)
Q Consensus 162 ~i~~~~~~---~~~~~~~~~~~~a~~~~~~v~~d~~~--~~~~-~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~ 235 (341)
|++++.+. .+.+.+..+++.+++++.++++|+.. ..|. ....+.+.++++++|++++|++|++.|++..
T Consensus 130 ~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~----- 204 (309)
T 1v1a_A 130 HLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWSPEEARGFLERALPGVDLLFLSEEEAELLFGRV----- 204 (309)
T ss_dssp EEETTGGGSCHHHHHHHHHHHHHHHTTTCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEEEEHHHHHHHHSSH-----
T ss_pred EEeCchhccCchHHHHHHHHHHHHHHcCCEEEEeCCCCcccCCHHHHHHHHHHHHHhCCEEECcHHHHHHHhCCH-----
Confidence 99998753 34567888999999999999999964 2232 2344567889999999999999999998631
Q ss_pred CHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEEC-CeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHH
Q 019448 236 DVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQD-GKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEE 314 (341)
Q Consensus 236 d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~-~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~ 314 (341)
+++++ +.|++.||||+|++|+++ ++ ++.+++|++++ +++|||||||+|+|||+++|++|+++++
T Consensus 205 --~~~~~---------~~g~~~vvvt~G~~G~~~-~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~~~ 269 (309)
T 1v1a_A 205 --EEALR---------ALSAPEVVLKRGAKGAWA-FVDGRRVEGSAFAV---EAVDPVGAGDAFAAGYLAGAVWGLPVEE 269 (309)
T ss_dssp --HHHHH---------HTCCSEEEEECGGGCEEE-EETTEEEECCCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHH
T ss_pred --HHHHH---------hcCCCEEEEEecCCCeeE-ecCCcEEEeCCCCC---CcCCCCCchHHHHHHHHHHHHcCCCHHH
Confidence 34443 236789999999999988 55 67788887654 7899999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhcccc--CCCCCC
Q 019448 315 CVRAGCYTSHVIIQRSGCT--YPEKPE 339 (341)
Q Consensus 315 a~~~a~~~Aa~~v~~~g~~--~p~~~~ 339 (341)
|+++|+++|++++++.|+. +|+.+|
T Consensus 270 a~~~a~~~aa~~v~~~G~~~~~~~~~~ 296 (309)
T 1v1a_A 270 RLRLANLLGASVAASRGDHEGAPYRED 296 (309)
T ss_dssp HHHHHHHHHHHHHTSSTTTTTCCCHHH
T ss_pred HHHHHHHHHHHHHcCCCCCcCCCCHHH
Confidence 9999999999999999984 576654
No 35
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=100.00 E-value=5.4e-44 Score=321.92 Aligned_cols=288 Identities=17% Similarity=0.163 Sum_probs=226.1
Q ss_pred EE-EEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 7 LL-GMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 7 v~-~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
|+ +.|++.+|+++.++ + |.+++..+..+....+||++.|+|+++++ ||.++.++|
T Consensus 4 I~~v~g~~~~D~~~~~~--------------------~-~~~g~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~i~ 59 (309)
T 3cqd_A 4 IYTLTLAPSLDSATITP--------------------Q-IYPEGKLRCTAPVFEPGGGGINVARAIAH---LGGSATAIF 59 (309)
T ss_dssp EEEECSSCEEEEEEEES--------------------C-CCSSSEEECCCCEEEEESHHHHHHHHHHH---TTCCEEEEE
T ss_pred EEEEeccchheEEEEcC--------------------C-CcCCCeeeccceeecCCchHHHHHHHHHH---cCCCeEEEE
Confidence 55 66799999999987 2 34444555567788999999999999998 469999999
Q ss_pred eeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEE-Ee-CCccceeecccccccCCcccCCCc--chhhhhccceEE
Q 019448 86 CIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVC-VV-GGERSLVANLSAANCYKSEHLKKP--ENWALVEKAKYF 161 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~-~~-~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~v 161 (341)
.+|+| +|+.+++.|++.||+++++...+ .|+.++.+ ++ +|+++++...++ .++++++... .....+++ +++
T Consensus 60 ~vG~d-~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~~~~~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~-~~v 134 (309)
T 3cqd_A 60 PAGGA-TGEHLVSLLADENVPVATVEAKD-WTRQNLHVHVEASGEQYRFVMPGA--ALNEDEFRQLEEQVLEIESG-AIL 134 (309)
T ss_dssp EECHH-HHHHHHHHHHHTTCCEEEEECSS-CCCCCEEEEETTTCCEEEEECCCC--CCCHHHHHHHHHHHHTSCTT-CEE
T ss_pred EecCc-hHHHHHHHHHHcCCCceeEEcCC-CCeeEEEEEEcCCCCEEEEEcCCC--CCCHHHHHHHHHHHHHhhcC-CEE
Confidence 99998 99999999999999999986544 36666666 65 677766555443 3555544320 01133677 999
Q ss_pred EEecccc-ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHh-hcCCC-cEEecCHHHHHHHhhhcCCCCCCHH
Q 019448 162 YIAGFFL-TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEK-VLPYM-DYIFGNETEARTFSKVQGWETDDVE 238 (341)
Q Consensus 162 ~i~~~~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~-~l~~~-dvl~~n~~E~~~l~~~~~~~~~d~~ 238 (341)
|++++.+ ..+.+.+..+++.+++++.++++||.... +++ +.+++ |++++|++|++.|++....+.+++.
T Consensus 135 ~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~--------~~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~ 206 (309)
T 3cqd_A 135 VISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGEA--------LSAALAIGNIELVKPNQKELSALVNRELTQPDDVR 206 (309)
T ss_dssp EEESCCCTTCCHHHHHHHHHHHHTTTCEEEEECCHHH--------HHHHTTTCCBSEECCBHHHHHHHHTSCCCSTTHHH
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHcCCeEEEECChHH--------HHHHHHhCCCEEEeeCHHHHHHHhCCCCCCHHHHH
Confidence 9998653 34568899999999999999999997532 333 33788 9999999999999886544445677
Q ss_pred HHHHHHhcCCccccCC-ccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHH
Q 019448 239 EIALKLSQWPKASEIR-KRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVR 317 (341)
Q Consensus 239 ~~~~~l~~~~~~~~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~ 317 (341)
++++.+ .+.| ++.+|||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+++++|++
T Consensus 207 ~~~~~l------~~~g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vdttGAGDaf~a~~~~~l~~g~~~~~a~~ 277 (309)
T 3cqd_A 207 KAAQEI------VNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPV---KSQSTVGAGDSMVGAMTLKLAENASLEEMVR 277 (309)
T ss_dssp HHHHHH------HHTTSBSCEEEECGGGCEEEECSSCEEEECCCSC---CCCCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHH------HHcCCCCEEEEEecCCceEEEECCceEEEeCCcc---ccCCCcCcHHHHHHHHHHHHHcCCCHHHHHH
Confidence 888888 5667 88999999999999998877888887654 8999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhccccCCCCCCC
Q 019448 318 AGCYTSHVIIQRSGCTYPEKPEF 340 (341)
Q Consensus 318 ~a~~~Aa~~v~~~g~~~p~~~~~ 340 (341)
+|+++|+.++++.|+.+|+.+|+
T Consensus 278 ~A~~~aa~~~~~~G~~~~~~~~v 300 (309)
T 3cqd_A 278 FGVAAGSAATLNQGTRLCSHDDT 300 (309)
T ss_dssp HHHHHHHHHTC-----CCCHHHH
T ss_pred HHHHHHHHHHcCcCCCCCCHHHH
Confidence 99999999999999988876653
No 36
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=100.00 E-value=4.5e-44 Score=328.02 Aligned_cols=296 Identities=16% Similarity=0.147 Sum_probs=217.9
Q ss_pred CCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcE
Q 019448 2 AQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGAT 81 (341)
Q Consensus 2 ~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v 81 (341)
+||++|++||++++|+...-+ .......+...++||+++|+|++|++ ||.++
T Consensus 22 ~mm~kv~~~GE~m~~l~p~~~-------------------------~~~~~~~~~~~~~GG~~aNvA~~lar---LG~~~ 73 (351)
T 4gm6_A 22 SMMKQVVTIGELLMRLSTQQG-------------------------IPFSQTTALDIHIGGAEANVAVNLSK---LGHPT 73 (351)
T ss_dssp ---CEEEEECCCEEEEECCTT-------------------------CCGGGCSEEEEEEECHHHHHHHHHHH---TTCCE
T ss_pred hccCCEEEEcceeEEecCCCC-------------------------CCccccCeEEEecCChHHHHHHHHHH---cCCCe
Confidence 355799999999999876332 12344566788999999999999998 56999
Q ss_pred EEEeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEE-eCCccceeecccccc---cCCcccCCCcchhhhhcc
Q 019448 82 SYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCV-VGGERSLVANLSAAN---CYKSEHLKKPENWALVEK 157 (341)
Q Consensus 82 ~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~-~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~ 157 (341)
.|+|.||+|.+|+.+++.|+++||+++++...+..++.+++.. +++....+.+..... ...+.++. ..+.+++
T Consensus 74 ~~ig~vG~D~~G~~l~~~L~~~GVdt~~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~d~~---~~~~~~~ 150 (351)
T 4gm6_A 74 RIATVVPANPIGKMAVEHLWRHQVDTAFVVEAGDRLGTYYLESGTALKAPSVVYDRQHSSFARHKSMDWD---LSELLKG 150 (351)
T ss_dssp EEEEEECSSHHHHHHHHHHHHTTEECTTEEECSSCCCEEEEECCBTTBCCEEEEECTTCHHHHCCCCCCC---HHHHHTT
T ss_pred EEEEEeCCCHHHHHHHHHHHHcCCCcccccccCCccceeEEEEccCCcceEEEEccccchhhhCCccccC---HHHHHhh
Confidence 9999999999999999999999999999865544455544444 343333333322221 33333332 2356889
Q ss_pred ceEEEEeccccccC---HHHHHHHHHHHHhCCCeEEEeCC--chhHH-HHHHHHHHhhcCCCcEEecCHHHHHHHhhhcC
Q 019448 158 AKYFYIAGFFLTVS---PDSIQLVAEHAAANNKVFMMNLS--APFIC-EFFKDALEKVLPYMDYIFGNETEARTFSKVQG 231 (341)
Q Consensus 158 ~~~v~i~~~~~~~~---~~~~~~~~~~a~~~~~~v~~d~~--~~~~~-~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~ 231 (341)
++++|++++.+..+ .+.+.++++.++++|+++++|+. +..|. +..++.++++++++|++++|++|+..+++...
T Consensus 151 ~~~~~~~g~~l~~~~~~~~~~~~~~~~ak~~g~~v~~D~n~r~~lw~~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~ 230 (351)
T 4gm6_A 151 IRVLHVSGITIALSTFWLEMVVKIIREAKRNGIKISFDMNYRAKLWELEAAKRAYQQLLPLVDYCSAGQMDAVAFFEISS 230 (351)
T ss_dssp EEEEEEEHHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCT
T ss_pred cccceecccchhhchhHHHHHHHHHHHHHHcCCCcccCCCcCchhhhhhhHHHHHHHHHHhCCccccCHHHHHHHhCCCC
Confidence 99999998775433 46788999999999999999884 44454 33566788999999999999999999987543
Q ss_pred CCCCCHHHH-HHHHhcCCccccCCccEEEEEeC--CCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhc
Q 019448 232 WETDDVEEI-ALKLSQWPKASEIRKRTAVITQG--ADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQ 308 (341)
Q Consensus 232 ~~~~d~~~~-~~~l~~~~~~~~~~~~~vvvt~G--~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~ 308 (341)
.. .+..+. .+...... ...+.+..+++.+ ..++.++..++.++.+++++ .+++|||||||+|+|||+++|++
T Consensus 231 ~~-~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~VvDttGAGDaF~ag~l~~l~~ 305 (351)
T 4gm6_A 231 ET-TDYYQAMHDKYPNIE--LFYATKRTVISASHHLLQGHLWTQGECWESEEYAI--YPIVDRVGGGDAYTAAVLHGILS 305 (351)
T ss_dssp TC-SCHHHHHHHHCTTCC--EEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEE--CSCSCCTTHHHHHHHHHHHHHHT
T ss_pred ch-hHHHHHHHhhhhhhh--hhhccccceeeeccCCceEEEEeCCceEEeCCCCC--CCcCCCCChhHHHHHHHHHHHHC
Confidence 22 333333 33321110 1123344555544 34667788888888887765 37899999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhhhhhhcccc
Q 019448 309 EKPIEECVRAGCYTSHVIIQRSGCT 333 (341)
Q Consensus 309 g~~~~~a~~~a~~~Aa~~v~~~g~~ 333 (341)
|+++++|+++|+++||++|+++|+.
T Consensus 306 g~~~~~al~~A~aaaal~v~~~Ga~ 330 (351)
T 4gm6_A 306 EWRPDETVKFATAAAGLKHSIHGDI 330 (351)
T ss_dssp TCCHHHHHHHHHHHHHHHTTSSSSS
T ss_pred CCCHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999984
No 37
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=100.00 E-value=5e-44 Score=323.68 Aligned_cols=287 Identities=20% Similarity=0.199 Sum_probs=234.4
Q ss_pred ceEEEEcCceeee-EeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEE
Q 019448 5 GILLGMGNPLLDI-SSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSY 83 (341)
Q Consensus 5 ~~v~~iG~~~lD~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~ 83 (341)
+.+++.+++.+|+ ++.++ ++ .+++..+.......+||++.|+|+++++ ||.++.+
T Consensus 3 mi~tvt~np~iD~~~~~v~--------------------~~-~~g~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~ 58 (320)
T 3ie7_A 3 LIYTITLNPAIDRLLFIRG--------------------EL-EKRKTNRVIKTEFDCGGKGLHVSGVLSK---FGIKNEA 58 (320)
T ss_dssp CEEEEESSCEEEEEEEESS--------------------SC-CTTSCCCCSEEEEEEESHHHHHHHHHHH---HTCCEEE
T ss_pred eEEEEecchHHeeeEEEcC--------------------Cc-cCCCeeEeceeeecCCchHHHHHHHHHH---cCCCeEE
Confidence 3688999999999 99997 34 5566666777889999999999999998 3599999
Q ss_pred EeeeecCchhHHHHHHHHhcCcceeee-ecCCCCceeEEEEEeCCc--cceeecccccccCCcccCCC--cchhhhhccc
Q 019448 84 IGCIGKDKFGEEMKKNSKLAGVNVHYY-EDESASTGTCAVCVVGGE--RSLVANLSAANCYKSEHLKK--PENWALVEKA 158 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~-~~~~~~t~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~ 158 (341)
+|.+|+| +|+.+++.|++.||+++++ ...+ +|+.+++++++|+ |+++...+ ..++++++.. ......+.++
T Consensus 59 i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~~-~t~~~~~~~~~g~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~ 134 (320)
T 3ie7_A 59 LGIAGSD-NLDKLYAILKEKHINHDFLVEAGT-STRECFVVLSDDTNGSTMIPEAG--FTVSQTNKDNLLKQIAKKVKKE 134 (320)
T ss_dssp EEEEEST-THHHHHHHHHHTTCCBCCEEETTC-CCEEEEEEEETTCSCCEEEECCC--CCCCHHHHHHHHHHHHHHCCTT
T ss_pred EEEecCc-hHHHHHHHHHHcCCceEEEEecCC-CCceEEEEEECCCceeEEEeCCC--CCCCHHHHHHHHHHHHHHhcCC
Confidence 9999998 9999999999999999998 5554 8999988888888 77765544 3455555432 1122467899
Q ss_pred eEEEEecccc-ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC-CCcEEecCHHHHHHHhhhcCCCCCC
Q 019448 159 KYFYIAGFFL-TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP-YMDYIFGNETEARTFSKVQGWETDD 236 (341)
Q Consensus 159 ~~v~i~~~~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~-~~dvl~~n~~E~~~l~~~~~~~~~d 236 (341)
|+++++++.+ ..+.+.+..+++.++++++++++|+.... +.+.+. ++|++++|++|++.|++... ..
T Consensus 135 ~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~--------l~~~l~~~~dil~~N~~E~~~l~g~~~---~~ 203 (320)
T 3ie7_A 135 DMVVIAGSPPPHYTLSDFKELLRTVKATGAFLGCDNSGEY--------LNLAVEMGVDFIKPNEDEVIAILDEKT---NS 203 (320)
T ss_dssp CEEEEESCCCTTCCHHHHHHHHHHHHHHTCEEEEECCHHH--------HHHHHHHCCSEECCBTTGGGGGSCTTC---CC
T ss_pred CEEEEeCCCCCCCCHHHHHHHHHHHHhcCCEEEEECChHH--------HHHHHhcCCeEEeeCHHHHHHHhCCCc---CC
Confidence 9999988653 34568899999999999999999997532 444454 99999999999999987421 21
Q ss_pred HHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHH
Q 019448 237 VEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECV 316 (341)
Q Consensus 237 ~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~ 316 (341)
..+.+.++ ... ++.+|||+|++|++++++++.+++|++++ +++|++||||+|+|||+++|++|+++++|+
T Consensus 204 ~~~~~~~~------~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~ag~~~~l~~g~~~~~a~ 273 (320)
T 3ie7_A 204 LEENIRTL------AEK-IPYLVVSLGAKGSICAHNGKLYQVIPPKV---QERNDTGAGDVFVGAFIAGLAMNMPITETL 273 (320)
T ss_dssp HHHHHHHH------TTT-CSEEEEECGGGCEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred CHHHHHHH------Hhh-CCEEEEEcCCCceEEEeCCcEEEEeCCcc---CCCCCcCchHHHHHHHHHHHHcCCCHHHHH
Confidence 23334444 223 78999999999999999999999988755 899999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhccccCCCCCCC
Q 019448 317 RAGCYTSHVIIQRSGCTYPEKPEF 340 (341)
Q Consensus 317 ~~a~~~Aa~~v~~~g~~~p~~~~~ 340 (341)
++|+++|+++|++.|+.+|+.+|+
T Consensus 274 ~~A~a~aa~~v~~~G~~~~~~~ev 297 (320)
T 3ie7_A 274 KVATGCSASKVMQQDSSSFDLEAA 297 (320)
T ss_dssp HHHHHHHHHHHTSSSSSCCCHHHH
T ss_pred HHHHHHHHHHHhCcCCCCCCHHHH
Confidence 999999999999999988887654
No 38
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=100.00 E-value=1.2e-44 Score=331.21 Aligned_cols=294 Identities=18% Similarity=0.184 Sum_probs=230.1
Q ss_pred CCceEEEEcCceeeeEee--cChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc
Q 019448 3 QEGILLGMGNPLLDISSV--VDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 3 ~~~~v~~iG~~~lD~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
++++|+|+|++++|++.. ++. + . ++.|.+ ..........+||+ .|+|+++++ ||.+
T Consensus 52 ~~~~ilvvG~~~~D~~~~g~v~r-----~--------~---p~~p~~--~~~~~~~~~~~GG~-~NvA~~la~---LG~~ 109 (352)
T 4e84_A 52 ARSRVLVVGDVMLDRYWFGNVDR-----I--------S---PEAPVP--VVHVQRQEERLGGA-ANVARNAVT---LGGQ 109 (352)
T ss_dssp TTCEEEEEECEEEEEEEEEEEEE-----E--------C---SSSSSE--EEEEEEEEEEEEEH-HHHHHHHHH---TTCE
T ss_pred CCCcEEEECccceEEEEeecccc-----c--------C---CCCCcc--eEEeeEEEEecChH-HHHHHHHHH---cCCC
Confidence 457899999999999986 320 0 0 011222 24455678899997 899999998 4699
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccce-eecc-cccccCCcccCCCcchhhhhccc
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSL-VANL-SAANCYKSEHLKKPENWALVEKA 158 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~-~~~~-~~~~~~~~~~~~~~~~~~~l~~~ 158 (341)
+.++|.+|+|.+|+.+++.|++.||++..+..++.+|+.++++++++.+.+ +... +.+....++.+. .....+.++
T Consensus 110 v~~ig~vG~D~~G~~i~~~L~~~GV~~~~~~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~ 187 (352)
T 4e84_A 110 AGLLCVVGCDEPGERIVELLGSSGVTPHLERDPALPTTIKLRVLARQQQLLRVDFEAMPTHEVLLAGLA--RFDVLLPQH 187 (352)
T ss_dssp EEEEEEEESSHHHHHHHHHHTTTSCEEEEEEETTSCCCEEEEEEESSCEEEEEEECCCCCHHHHHHHHH--HHHHHGGGC
T ss_pred EEEEEEeCCChhHHHHHHHHHHcCCceeeEECCCCCCceEEEEEcCCceEEEEEcCCCCCHHHHHHHHH--HHHHhcccC
Confidence 999999999999999999999999999666667778999888887544433 3222 221122121111 123568899
Q ss_pred eEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHH
Q 019448 159 KYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVE 238 (341)
Q Consensus 159 ~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~ 238 (341)
|+++++++. ..+.+.+..+++.++++++++++|+.... .++++++|++++|++|++.+++ ...+.+++.
T Consensus 188 ~~v~~~g~~-~~~~~~~~~~~~~a~~~g~~v~~D~~~~~---------~~~l~~~dil~pN~~Ea~~l~g-~~~~~~~~~ 256 (352)
T 4e84_A 188 DVVLMSDYA-KGGLTHVTTMIEKARAAGKAVLVDPKGDD---------WARYRGASLITPNRAELREVVG-QWKSEDDLR 256 (352)
T ss_dssp SEEEEECCS-SSSCSSHHHHHHHHHHTTCEEEEECCSSC---------CSTTTTCSEECCBHHHHHHHHC-CCSSHHHHH
T ss_pred CEEEEeCCC-CCCHHHHHHHHHHHHhcCCEEEEECCCcc---------hhhccCCcEEcCCHHHHHHHhC-CCCCHHHHH
Confidence 999999765 23334588899999999999999997643 2578999999999999999987 222234566
Q ss_pred HHHHHHhcCCcccc-CCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHH
Q 019448 239 EIALKLSQWPKASE-IRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVR 317 (341)
Q Consensus 239 ~~~~~l~~~~~~~~-~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~ 317 (341)
++++.+ .+ .|++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+++++|++
T Consensus 257 ~~a~~l------~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~pa~~v---~vvDttGAGDaF~ag~l~~l~~g~~l~~al~ 327 (352)
T 4e84_A 257 ARVANL------RAELDIDALLLTRSEEGMTLFSAGGELHAPALAR---EVFDVSGAGDTVIATVATMLGAGVPLVDAVV 327 (352)
T ss_dssp HHHHHH------HHHHTCSEEEEECGGGCEEEEETTEEEEECCCCS---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHH------HHHhCCCEEEEEcCCCcEEEEECCceEEecCCCc---CccCCccccHHHHHHHHHHHHcCCCHHHHHH
Confidence 677776 33 5789999999999999999999999998755 8999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhccccCCCCCCC
Q 019448 318 AGCYTSHVIIQRSGCTYPEKPEF 340 (341)
Q Consensus 318 ~a~~~Aa~~v~~~g~~~p~~~~~ 340 (341)
+|+++|+++|++.|+..|+.+|+
T Consensus 328 ~A~aaaa~~v~~~Ga~~~t~~el 350 (352)
T 4e84_A 328 LANRAAGIVVGKLGTATVDYDEL 350 (352)
T ss_dssp HHHHHHHHHHTSSSSCCCCHHHH
T ss_pred HHHHHHHHHhcCCCCccCCHHHh
Confidence 99999999999999988887765
No 39
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=2.3e-44 Score=327.22 Aligned_cols=290 Identities=14% Similarity=0.140 Sum_probs=230.5
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhcc---CCceEecCchHHHHHHHHHHHhcCCCcE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASK---YNVEYIAGGATQNSIRVAQWMLQIPGAT 81 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~GG~a~n~a~~l~~l~~lg~~v 81 (341)
+.|+|+|++++|+++.++ + |.+++..+. ......+||+++|+|+++++ ||.++
T Consensus 13 ~~~~v~G~~~vD~~~~~~--------------------~-~~~g~~~~~s~~~~~~~~~GG~~~NvA~~la~---LG~~~ 68 (331)
T 2ajr_A 13 MVLTVTLNPALDREIFIE--------------------D-FQVNRLYRINDLSKTQMSPGGKGINVSIALSK---LGVPS 68 (331)
T ss_dssp CEEEEESSCEEEEEEECT--------------------T-CCSSCEEECCSGGGEEEEEESHHHHHHHHHHH---TTCCE
T ss_pred eEEEEecchHHeEEEEcC--------------------C-ccCCceEEeccccceEEecCcHHHHHHHHHHH---cCCCe
Confidence 579999999999999987 2 333444444 56788999999999999998 46999
Q ss_pred EEEeeeecCchhHHHHHHHHhcC--cceeeeecCCCCceeEEEEEe-CCcc-ceeecccccccCCcccCCCc--chhhhh
Q 019448 82 SYIGCIGKDKFGEEMKKNSKLAG--VNVHYYEDESASTGTCAVCVV-GGER-SLVANLSAANCYKSEHLKKP--ENWALV 155 (341)
Q Consensus 82 ~~i~~vG~D~~g~~i~~~l~~~g--i~~~~~~~~~~~t~~~~~~~~-~g~~-~~~~~~~~~~~~~~~~~~~~--~~~~~l 155 (341)
.++|.+|+| +|+.+++.|++.| |+++++...+ .|+.++++++ +|++ +.+...++ .++++++... .....+
T Consensus 69 ~~~~~vG~d-~G~~i~~~L~~~g~~V~~~~v~~~~-~t~~~~~~v~~~g~~~~~~~~~g~--~l~~~~~~~~~~~~~~~~ 144 (331)
T 2ajr_A 69 VATGFVGGY-MGKILVEELRKISKLITTNFVYVEG-ETRENIEIIDEKNKTITAINFPGP--DVTDMDVNHFLRRYKMTL 144 (331)
T ss_dssp EEEEEEEHH-HHHHHHHHHHHHCTTEEEEEEEESS-CCEEEEEEEETTTTEEEEEECCCC--CCCHHHHHHHHHHHHHHH
T ss_pred EEEEEecCc-hHHHHHHHHHHcCCccceEEEEcCC-CCeEEEEEEeCCCceEEEEeCCCC--CCCHHHHHHHHHHHHHhc
Confidence 999999998 9999999999999 9999986544 4777777776 6777 55544443 3555544320 012356
Q ss_pred ccceEEEEecccc-ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhc---CCCcEEecCHHH-HHHHhhhc
Q 019448 156 EKAKYFYIAGFFL-TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVL---PYMDYIFGNETE-ARTFSKVQ 230 (341)
Q Consensus 156 ~~~~~v~i~~~~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l---~~~dvl~~n~~E-~~~l~~~~ 230 (341)
.++++++++++.+ ..+.+.+..+++.+++++.++++|+.... +.+++ +++|++++|++| ++.+++..
T Consensus 145 ~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~--------~~~~l~~~~~~dil~~N~~E~~~~l~g~~ 216 (331)
T 2ajr_A 145 SKVDCVVISGSIPPGVNEGICNELVRLARERGVFVFVEQTPRL--------LERIYEGPEFPNVVKPDLRGNHASFLGVD 216 (331)
T ss_dssp TTCSEEEEESCCCTTSCTTHHHHHHHHHHHTTCEEEEECCHHH--------HHHHHHSSCCCSEECCCCTTCCSCBTTBC
T ss_pred ccCCEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECChHH--------HHHHHhcCCCCeEEEeCccchHHHHhCCC
Confidence 8899999987653 34467899999999999999999997532 33344 459999999999 99888753
Q ss_pred CCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEe-ceecCCCcccCCCCCchhhHHHHHHHHh-c
Q 019448 231 GWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFP-VIVLPKDKLVDTNGAGDAFVGGFLSQLV-Q 308 (341)
Q Consensus 231 ~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~-~~~~~~~~~vd~tGAGDaf~ag~~~~l~-~ 308 (341)
..+.+++.++++++ .+. ++.+|||+|++|++++++++.+++| ++++ +++|||||||+|+|||+++|+ +
T Consensus 217 ~~~~~~~~~~~~~l------~~~-~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~l~~l~~~ 286 (331)
T 2ajr_A 217 LKTFDDYVKLAEKL------AEK-SQVSVVSYEVKNDIVATREGVWLIRSKEEI---DTSHLLGAGDAYVAGMVYYFIKH 286 (331)
T ss_dssp CCSHHHHHHHHHHH------HHH-SSEEEEEETTTEEEEECSSCEEEEEESSCC---CGGGCTTHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH------HHh-cCEEEEeecCCceEEEeCCcEEEEecCCcc---cccCCCchHHHHHHHHHHHHHHc
Confidence 32223456677777 455 7899999999999999888788888 7654 899999999999999999999 9
Q ss_pred CCCHHHHHHHHHHHhhhhhhhccccCCCCCCC
Q 019448 309 EKPIEECVRAGCYTSHVIIQRSGCTYPEKPEF 340 (341)
Q Consensus 309 g~~~~~a~~~a~~~Aa~~v~~~g~~~p~~~~~ 340 (341)
|+++++|+++|+++|+++|++.|+.+|+.+|+
T Consensus 287 g~~~~~al~~A~a~aa~~v~~~G~~~~~~~ev 318 (331)
T 2ajr_A 287 GANFLEMAKFGFASALAATRRKEKYMPDLEAI 318 (331)
T ss_dssp CSCHHHHHHHHHHHHHHHTTSSSCCCCCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHcCcCcCCCCHHHH
Confidence 99999999999999999999999988876653
No 40
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=100.00 E-value=3.7e-43 Score=316.73 Aligned_cols=281 Identities=19% Similarity=0.266 Sum_probs=227.7
Q ss_pred CCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEE
Q 019448 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATS 82 (341)
Q Consensus 3 ~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~ 82 (341)
++++|+++|++++|++..++ ++|..++..+..+....+||++.|+|+++++ ||.++.
T Consensus 16 ~~~~i~viG~~~iD~~~~~~--------------------~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~---LG~~v~ 72 (312)
T 2hlz_A 16 RGSQILCVGLVVLDVISLVD--------------------KYPKEDSEIRCLSQRWQRGGNASNSCTILSL---LGAPCA 72 (312)
T ss_dssp -CCEEEEESCCEEEEEEEES--------------------SCCCTTCEEECSEEEEEEESHHHHHHHHHHH---HTCCEE
T ss_pred CCCcEEEECcceEEEeeccc--------------------cCCCccceeecccceeccCccHHHHHHHHHH---cCCceE
Confidence 45689999999999999887 3454444445556678999999999999998 359999
Q ss_pred EEeeeecCchhHHHHHHHHhcCcceeeeecC-CCCceeEEEEEe--CCccceeecccccccCCcccCCCcchhhhhccce
Q 019448 83 YIGCIGKDKFGEEMKKNSKLAGVNVHYYEDE-SASTGTCAVCVV--GGERSLVANLSAANCYKSEHLKKPENWALVEKAK 159 (341)
Q Consensus 83 ~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~-~~~t~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 159 (341)
++|.+|+|.+|+.+++.|++.||+++++... +.+|+.++++++ +|+|+++.+.++...++++++.. ..+.+++
T Consensus 73 ~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~~~v~~~~g~r~~~~~~~~~~~~~~~~~~~----~~l~~~~ 148 (312)
T 2hlz_A 73 FMGSMAPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPDVSATDFEK----VDLTQFK 148 (312)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCEEEEEEETTTCCEEEEEECCCCCCCCHHHHHT----SCGGGEE
T ss_pred EEEEecCchHHHHHHHHHHHcCCCCccceeccCCCCCeEEEEEECCCCceEEEecCCccccCCHHHhhH----hhhccCC
Confidence 9999999999999999999999999987544 567787777664 58888887777666777776653 2468899
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhC--------CCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcC
Q 019448 160 YFYIAGFFLTVSPDSIQLVAEHAAAN--------NKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQG 231 (341)
Q Consensus 160 ~v~i~~~~~~~~~~~~~~~~~~a~~~--------~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~ 231 (341)
++|++++ +++....+++.++++ ++++++|+... ++.++++++++|++++|++|++.+ +
T Consensus 149 ~v~~~~~----~~~~~~~~~~~a~~~~~~~~~~~~~~v~~d~~~~------~~~~~~~l~~~dil~~n~~ea~~l-g--- 214 (312)
T 2hlz_A 149 WIHIEGR----NASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKP------REELFQLFGYGDVVFVSKDVAKHL-G--- 214 (312)
T ss_dssp EEEEECS----SHHHHHHHHHHHHHHHTTSCGGGCCEEEEEECSC------CGGGGGGGGSSSEEEECHHHHHHT-T---
T ss_pred EEEEecc----CHHHHHHHHHHHHHhcccccCCCCeEEEEEcccc------hHHHHHHHhcCCEEEEcHHHHHHc-C---
Confidence 9999975 356677778877776 67899998653 134678899999999999999986 3
Q ss_pred CCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEEC-CeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCC
Q 019448 232 WETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQD-GKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK 310 (341)
Q Consensus 232 ~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~-~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~ 310 (341)
..+++++++.+.++ ...| +.||||+|++|+++++. +..+++|+++ .++++||+||||+|+|||+++|++|+
T Consensus 215 --~~~~~~~~~~l~~~---~~~g-~~vvvt~G~~G~~~~~~~~~~~~~~~~~--~~~vvdt~GAGDaf~a~~~~~l~~g~ 286 (312)
T 2hlz_A 215 --FQSAEEALRGLYGR---VRKG-AVLVCAWAEEGADALGPDGKLLHSDAFP--PPRVVDTLGAGDTFNASVIFSLSQGR 286 (312)
T ss_dssp --CCSHHHHHHHHGGG---SCTT-CEEEEECGGGCEEEECTTCCEEEECCCC--CSSCCCCTTHHHHHHHHHHHHHHTTC
T ss_pred --CCCHHHHHHHHHHh---cCCC-CEEEEEecccCeEEEccCCCEEECCCCC--CCCcccCCCchHHHHHHHHHHHHcCC
Confidence 24678888887432 1223 78999999999999874 4567788753 24789999999999999999999999
Q ss_pred CHHHHHHHHHHHhhhhhhhccc
Q 019448 311 PIEECVRAGCYTSHVIIQRSGC 332 (341)
Q Consensus 311 ~~~~a~~~a~~~Aa~~v~~~g~ 332 (341)
++++|+++|+++|+++|++.|+
T Consensus 287 ~~~~a~~~a~~~aa~~v~~~G~ 308 (312)
T 2hlz_A 287 SVQEALRFGCQVAGKKCGLQGF 308 (312)
T ss_dssp CHHHHHHHHHHHHHHHHTSSSS
T ss_pred CHHHHHHHHHHHHHHHHhhcCc
Confidence 9999999999999999999997
No 41
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=100.00 E-value=2.4e-43 Score=318.17 Aligned_cols=281 Identities=20% Similarity=0.262 Sum_probs=230.6
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i 84 (341)
++|+|+|++++|++...+ ++..+..+....+||++.|+|+++++ ||.++.++
T Consensus 2 ~~v~viG~~~iD~~~~~~-------------------------g~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~i 53 (313)
T 3ewm_A 2 SLIASIGELLIDLISVEE-------------------------GDLKDVRLFEKHPGGAPANVAVGVSR---LGVKSSLI 53 (313)
T ss_dssp CEEEEESCCEEEEEESSS-------------------------SCTTTCCEEEEEEECHHHHHHHHHHH---TTCEEEEE
T ss_pred CcEEEECceeeeeecCCC-------------------------CCcccccceeecCCCHHHHHHHHHHH---CCCCeEEE
Confidence 469999999999997543 12334566788999999999999998 56999999
Q ss_pred eeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEeCCccceeeccc-ccccCCcccCCCcchhhhhccceEEE
Q 019448 85 GCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVVGGERSLVANLS-AANCYKSEHLKKPENWALVEKAKYFY 162 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~v~ 162 (341)
|.+|+|.+|+.+++.|++.||+++++. .++.+|+.+++..++|+|+++.+.+ +...++++++.. ..+++++++|
T Consensus 54 g~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~g~~~~~~~~~~a~~~l~~~~~~~----~~l~~~~~~~ 129 (313)
T 3ewm_A 54 SKVGNDPFGEYLIEELSKENVDTRGIVKDEKKHTGIVFVQLKGASPSFLLYDDVAYFNMTLNDINW----DIVEEAKIVN 129 (313)
T ss_dssp EEEESSHHHHHHHHHHHHTTCBCTTEEEESSSCCEEEEEECSSSSCEEEECCSSGGGCCCGGGCCH----HHHHHCSEEE
T ss_pred EEeCCCHHHHHHHHHHHHcCCCccceeecCCCCceEEEEEecCCCcceEeeccCHHHhCChhhCCH----HHhCCCCEEE
Confidence 999999999999999999999999875 5677898887777678888877665 345777877763 5678899999
Q ss_pred Eecccc--ccCHHHHHHHHHHHHhCCCeEEEeCCch--hHH---HHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCC
Q 019448 163 IAGFFL--TVSPDSIQLVAEHAAANNKVFMMNLSAP--FIC---EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETD 235 (341)
Q Consensus 163 i~~~~~--~~~~~~~~~~~~~a~~~~~~v~~d~~~~--~~~---~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~ 235 (341)
++++.+ +.+.+.+..+++.++ .+.++++||... .|. ....+.++++++++|++++|++|++.+++...
T Consensus 130 ~~g~~~~~~~~~~~~~~~~~~a~-~~~~v~~Dp~~~~~~~~~~~~~~~~~~~~~l~~~di~~~N~~E~~~l~~~~~---- 204 (313)
T 3ewm_A 130 FGSVILARNPSRETVMKVIKKIK-GSSLIAFDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYLENQGV---- 204 (313)
T ss_dssp EESGGGGSTTHHHHHHHHHHHHB-TTBEEEEECCCCGGGGTTCHHHHHHHHHHHHHHCSEEEEEHHHHHHHHTTTC----
T ss_pred EcCcccCCcchHHHHHHHHHHhc-cCCEEEEeCCCChHHcCCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhccCc----
Confidence 999754 345578889999888 468899999642 232 23445678889999999999999998875310
Q ss_pred CHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHh--cCCCHH
Q 019448 236 DVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLV--QEKPIE 313 (341)
Q Consensus 236 d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~--~g~~~~ 313 (341)
...+...+|||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|+ +|++++
T Consensus 205 ---------------~~~~~~~vviT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaf~a~~~~~l~~~~g~~l~ 266 (313)
T 3ewm_A 205 ---------------EVKGSMLTAITLGPKGCRLIKNETVVDVPSYNV---NPLDTTGAGDAFMAALLVGILKLKGLDLL 266 (313)
T ss_dssp ---------------CCCCSSEEEEECGGGEEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHHSSSCCHH
T ss_pred ---------------cccCceEEEEEECCCCeEEEECCeeEEcCCCCc---ccCCCCCchHHHHHHHHHHHHhcCCCCHH
Confidence 112345689999999999999998888888765 899999999999999999999 999999
Q ss_pred HHHHHHHHHhhhhhhhccc-cCCCCCCC
Q 019448 314 ECVRAGCYTSHVIIQRSGC-TYPEKPEF 340 (341)
Q Consensus 314 ~a~~~a~~~Aa~~v~~~g~-~~p~~~~~ 340 (341)
+|+++|+++|+++|++.|+ .+|+.+|+
T Consensus 267 ~a~~~A~~~aa~~v~~~G~~~~p~~~ev 294 (313)
T 3ewm_A 267 KLGKFANLVAALSTQKRGAWSTPRKDEL 294 (313)
T ss_dssp HHHHHHHHHHHHHTTSCSSCCCCCHHHH
T ss_pred HHHHHHHHHHHHHHccCCCCCCCCHHHH
Confidence 9999999999999999998 67776654
No 42
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=100.00 E-value=1e-42 Score=313.12 Aligned_cols=286 Identities=19% Similarity=0.206 Sum_probs=228.9
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
-+++.|++.+|++..++. + .+++..+.......+||++.|+|+++++ ||.++.++|
T Consensus 2 i~tv~~n~~~D~~~~~~~--------------------~-~~g~~~~~~~~~~~~GG~~~N~A~~la~---LG~~~~~~~ 57 (306)
T 2abq_A 2 IYTVTLNPSIDYIVQVEN--------------------F-QQGVVNRSERDRKQPGGKGINVSRVLKR---LGHETKALG 57 (306)
T ss_dssp EEEEESSCEEEEEEECTT--------------------C-CSSSEEECSEEEEEEECHHHHHHHHHHH---TTCCCEEEE
T ss_pred EEEEecCchheEEEEcCC--------------------c-ccCCeEEeceeEecCCchHHHHHHHHHH---cCCCceEEE
Confidence 578889999999999872 1 3333444456778999999999999998 469999999
Q ss_pred eeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCc-chhhhhccceEEEEe
Q 019448 86 CIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKP-ENWALVEKAKYFYIA 164 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~v~i~ 164 (341)
.+|+ .+|+.+++.|++.||+++++...+ .|+.++.+ .+|+++.+...++ .++++++... +.+..++++|++|++
T Consensus 58 ~vG~-~~g~~i~~~L~~~gv~~~~v~~~~-~t~~~~~~-~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~v~~~ 132 (306)
T 2abq_A 58 FLGG-FTGAYVRNALEKEEIGLSFIEVEG-DTRINVKI-KGKQETELNGTAP--LIKKEHVQALLEQLTELEKGDVLVLA 132 (306)
T ss_dssp EEEH-HHHHHHHHHHHHTTCEECCEEESS-CCEEEEEE-ESSSCEEEBCCCC--CCCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred Eecc-hhHHHHHHHHHHcCCceEEEEcCC-CCceEEEE-eCCceEEEECCCC--CCCHHHHHHHHHHHHhccCCCEEEEe
Confidence 9998 799999999999999999986544 47777665 6787765544442 4555554320 011115789999998
Q ss_pred cccc-ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC-CCcEEecCHHHHHHHhhhcCCCCCCHHHHHH
Q 019448 165 GFFL-TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP-YMDYIFGNETEARTFSKVQGWETDDVEEIAL 242 (341)
Q Consensus 165 ~~~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~-~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~ 242 (341)
++.+ ..+.+.+..+++.+++++.++++|+... .++++++ ++|++++|++|+..+++....+.+++.++++
T Consensus 133 g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~--------~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~ 204 (306)
T 2abq_A 133 GSVPQAMPQTIYRSMTQIAKERGAFVAVDTSGE--------ALHEVLAAKPSFIKPNHHELSELVSKPIASIEDAIPHVQ 204 (306)
T ss_dssp SCCCTTSCTTHHHHHHHHHHTTTCEEEEECCHH--------HHHHHGGGCCSEECCBHHHHHHHHTSCCCSHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHHHhcCCEEEEECChH--------HHHHHHhcCCcEEecCHHHHHHHhCCCCCCHHHHHHHHH
Confidence 8653 3456889999999999999999999743 2567888 9999999999999998754322345566777
Q ss_pred HHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHHH
Q 019448 243 KLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYT 322 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~~ 322 (341)
.+ .+.|++.+|||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+++++|+++|+++
T Consensus 205 ~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~a~~~~~l~~g~~~~~a~~~A~a~ 275 (306)
T 2abq_A 205 RL------IGEGIESILVSFAGDGALFASAEGMFHVNVPSG---EVRNSVGAGDSVVAGFLAALQEGKSLEDAVPFAVAA 275 (306)
T ss_dssp HH------HHTTCCEEEEECGGGCEEEEETTEEEEECCCCC---CCCCCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HH------HHcCCCEEEEecCCCceEEEeCCCEEEEeCCCc---cccCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 77 566889999999999999998888888887654 889999999999999999999999999999999999
Q ss_pred hhhhhhhccccCCCCCC
Q 019448 323 SHVIIQRSGCTYPEKPE 339 (341)
Q Consensus 323 Aa~~v~~~g~~~p~~~~ 339 (341)
|+++|++. .+|+.+|
T Consensus 276 aa~~v~~~--~~p~~~e 290 (306)
T 2abq_A 276 GSATAFSD--GFCTREE 290 (306)
T ss_dssp HHHHHHSS--SCCCHHH
T ss_pred HHHHhcCc--CCCCHHH
Confidence 99999998 6676654
No 43
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=100.00 E-value=1.8e-42 Score=314.00 Aligned_cols=292 Identities=16% Similarity=0.206 Sum_probs=229.0
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
+|+|+|++++|++..++++++..+ . .+++|..++..........+||++.|+|+++++ ||.++.++|
T Consensus 2 ~i~v~G~~~iD~~~~~~~~~~~~~--~--------~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~i~ 68 (326)
T 3b1n_A 2 ATLICGSIAYDNIMTFEGRFREHI--L--------PDQVHLINLSFLVPTMRREFGGCAGNIAYALNL---LGGDARMMG 68 (326)
T ss_dssp CEEEESCCEEEEEEECSSCGGGGC--C--------TTSSSSCEEEEECCSCCCEEECHHHHHHHHHHH---TTCCEEEEE
T ss_pred cEEEECcceEEEEEecchhhhhhc--c--------ccccCCCCcceecccceeccCCHHHHHHHHHHH---cCCCeeEEE
Confidence 699999999999998854433221 1 113444444444556778999999999999998 469999999
Q ss_pred eeec-CchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccceEEE
Q 019448 86 CIGK-DKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFY 162 (341)
Q Consensus 86 ~vG~-D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 162 (341)
.+|+ | +|+ +++.|++.||+++++. .++.+|+.++++++ +|++.+..+.++...+.++++.. ..++++++
T Consensus 69 ~vG~~D-~g~-i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~~~~~~~~~------~~~~~~v~ 140 (326)
T 3b1n_A 69 TLGAVD-AQP-YLDRMDALGLSREYVRVLPDTYSAQAMITTDLDNNQITAFHPGAMMQSHVNHAGE------AKDIKLAI 140 (326)
T ss_dssp EEETTT-CHH-HHHHHHHHTCEEEEEEEETTCCCEEEEEEECTTCCCEEEEECGGGGGGGGSCGGG------CCSCSEEE
T ss_pred EECCcC-HHH-HHHHHHHcCCcccceEEcCCCCceEEEEEECCCCceEEEEecChhhhcChhhccc------ccCCCEEE
Confidence 9999 9 899 9999999999999885 45668999988887 57776656666655665555542 27899999
Q ss_pred EeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHH
Q 019448 163 IAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIAL 242 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~ 242 (341)
+++. .++.+.++++.+++++.++++|+..... ....+.++++++++|++++|++|++.+++... .+.++
T Consensus 141 ~~~~----~~~~~~~~~~~a~~~g~~v~~D~~~~~~-~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~---~~~~~--- 209 (326)
T 3b1n_A 141 VGPD----GFQGMVQHTEELAQAGVPFIFDPGQGLP-LFDGATLRRSIELATYIAVNDYEAKLVCDKTG---WSEDE--- 209 (326)
T ss_dssp ECSC----CHHHHHHHHHHHHHHTCCEEECCGGGGG-GCCHHHHHHHHHHCSEEEEEHHHHHHHHHHHC---CCHHH---
T ss_pred ECCc----cHHHHHHHHHHHHHCCCEEEEeCchhhh-hccHHHHHHHHHhCCEEecCHHHHHHHhCCCC---CCHHH---
Confidence 9763 3678889999999999999999964321 00234567888999999999999999987532 23333
Q ss_pred HHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHHH
Q 019448 243 KLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYT 322 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~~ 322 (341)
+ .+ +++.||||+|++|++++++++.+++|+++++ .++|||||||+|+|||+++|++|+++++|+++|+++
T Consensus 210 -l------~~-~~~~vvvT~G~~Ga~~~~~~~~~~~~~~~v~--~vvDttGAGDaF~ag~l~~l~~g~~~~~a~~~A~~~ 279 (326)
T 3b1n_A 210 -I------AS-RVQALIITRGEHGATIRHRDGTEQIPAVRAE--RVIDPTGCGDAFRGGLLYGIEHGFDWATAGRLASLM 279 (326)
T ss_dssp -H------HT-TSSEEEEECGGGCEEEEETTEEEEECCCCCS--CCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred -H------Hh-cCCEEEEecCCCceEEEECCcEEEeCCCCCC--CCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 3 12 2688999999999999988888888876541 378999999999999999999999999999999999
Q ss_pred hhhhhhhcccc--CCCCCC
Q 019448 323 SHVIIQRSGCT--YPEKPE 339 (341)
Q Consensus 323 Aa~~v~~~g~~--~p~~~~ 339 (341)
|+++|++.|+. +|+.+|
T Consensus 280 aa~~v~~~G~~~~~~~~~e 298 (326)
T 3b1n_A 280 GALKIAHQGPQTYAPTRAE 298 (326)
T ss_dssp HHHHHTSSSTTCCCCCHHH
T ss_pred HHHHHcCCCCCCCCCCHHH
Confidence 99999999984 566554
No 44
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=100.00 E-value=1.4e-42 Score=315.79 Aligned_cols=297 Identities=17% Similarity=0.175 Sum_probs=231.9
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i 84 (341)
++|+|+|++++|++..++++++..+- .+++|..++..........+||++.|+|+++++ ||.++.++
T Consensus 11 m~i~v~G~~~~D~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~i 77 (334)
T 2pkf_A 11 MTIAVTGSIATDHLMRFPGRFSEQLL----------PEHLHKVSLSFLVDDLVMHRGGVAGNMAFAIGV---LGGEVALV 77 (334)
T ss_dssp SEEEEESCCEEEEEEECSSCTHHHHT----------TSCGGGCCCCCCCSEEEEEEECHHHHHHHHHHH---TTCEEEEE
T ss_pred CeEEEECChhheEEEecChHHhhhhc----------hhhccccccccccccceecCCChHHHHHHHHHH---cCCCeEEE
Confidence 48999999999999988544443220 113454444444556778999999999999998 46999999
Q ss_pred eeeecCchhHHHHHHHHhcCcceeeeec-CCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccceEEE
Q 019448 85 GCIGKDKFGEEMKKNSKLAGVNVHYYED-ESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFY 162 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~~-~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 162 (341)
|.+|+| +|+ +++.|++.||+++++.. ++.+|+.++++++ +|++.+..+.++...++++++.. ....+.+++++|
T Consensus 78 ~~vG~D-~g~-i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~--~~~~l~~~~~v~ 153 (334)
T 2pkf_A 78 GAAGAD-FAD-YRDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYPGAMSEARNIKLAD--VVSAIGKPELVI 153 (334)
T ss_dssp CEECGG-GHH-HHHHHHTTTEECTTCEECSSCCCEEEEEEECTTCCEEEEEECGGGGGGGGCCHHH--HHHHHCSCSEEE
T ss_pred EEEeCc-hHH-HHHHHHHCCCceeeeEecCCCCceEEEEEEcCCCCEEEEECCchhhhCCHhhcCh--hhhhhcCCCEEE
Confidence 999999 999 99999999999998754 4568999888876 57777766666655666655542 112357899999
Q ss_pred EeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHH
Q 019448 163 IAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIAL 242 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~ 242 (341)
+++. .++.+..+++.+++++.++++|+.... .....+.++++++++|++++|++|++.+++... .+.++
T Consensus 154 ~~~~----~~~~~~~~~~~a~~~g~~v~~D~~~~~-~~~~~~~l~~~l~~~dil~~N~~E~~~l~g~~~---~~~~~--- 222 (334)
T 2pkf_A 154 IGAN----DPEAMFLHTEECRKLGLAFAADPSQQL-ARLSGEEIRRLVNGAAYLFTNDYEWDLLLSKTG---WSEAD--- 222 (334)
T ss_dssp EESC----CHHHHHHHHHHHHHHTCCEEEECGGGG-GTSCHHHHHTTTTTCSEEEEEHHHHHHHHHHHC---CCHHH---
T ss_pred EcCC----ChHHHHHHHHHHHhcCCeEEEeccchh-hhhhHHHHHHHHhcCCEEecCHHHHHHHhccCC---CCHHH---
Confidence 9864 367888899999999999999996432 000234577899999999999999999987532 23332
Q ss_pred HHhcCCccccCCccEEEEEeCCCceEEEECCe-eEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHH
Q 019448 243 KLSQWPKASEIRKRTAVITQGADPVVVAQDGK-LKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCY 321 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~-~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~ 321 (341)
+ .+. ++.||||+|++|++++++++ .+++|+++++ .++||+||||+|+|||+++|++|+++++|+++|++
T Consensus 223 -l------~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~--~vvDttGAGDaF~a~~~~~l~~g~~~~~a~~~A~~ 292 (334)
T 2pkf_A 223 -V------MAQ-IDLRVTTLGPKGVDLVEPDGTTIHVGVVPET--SQTDPTGVGDAFRAGFLTGRSAGLGLERSAQLGSL 292 (334)
T ss_dssp -H------HTT-CSCEEEECGGGCEEEECTTSCEEEECCCCCS--CCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred -H------Hhc-CCEEEEEeCCCCeEEEeCCCcEEEeCCcCCC--CCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 3 222 67899999999999998777 7888876541 37899999999999999999999999999999999
Q ss_pred Hhhhhhhhcccc--CCCCCC
Q 019448 322 TSHVIIQRSGCT--YPEKPE 339 (341)
Q Consensus 322 ~Aa~~v~~~g~~--~p~~~~ 339 (341)
+|+.+|++.|+. +|+.+|
T Consensus 293 ~aa~~v~~~G~~~~~p~~~e 312 (334)
T 2pkf_A 293 VAVLVLESTGTQEWQWDYEA 312 (334)
T ss_dssp HHHHHHTSSSSSCCCCCHHH
T ss_pred HHHHHHhCCCCCcCCCCHHH
Confidence 999999999984 566554
No 45
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=100.00 E-value=7.6e-42 Score=308.29 Aligned_cols=276 Identities=20% Similarity=0.267 Sum_probs=220.2
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCC-cEEE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPG-ATSY 83 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~-~v~~ 83 (341)
++|+|+|++++|++.... .+....+||++.|+|+++++ ||. ++.+
T Consensus 3 ~~ilviG~~~iD~~~~~~-------------------------------~~~~~~~GG~~~NvA~~la~---LG~~~~~~ 48 (313)
T 3kd6_A 3 LSLLVIGSLAFDDIETPF-------------------------------GRSDNTLGGSSTYIALSASY---FTDEPIRM 48 (313)
T ss_dssp CCEEEESCCEEEEEECSS-------------------------------CEEEEEEECHHHHHHHHHTT---TCSSCEEE
T ss_pred ccEEEEeEEEEeeecCCC-------------------------------CcccccCCCHHHHHHHHHHH---hCCCceEE
Confidence 479999999999996432 23467999999999999987 569 9999
Q ss_pred EeeeecCchhHHHHHHHHhcCcceeeeec-CCCCceeEEEEE--e-CCccceeecccccccCCcccCCCcchhhhhccce
Q 019448 84 IGCIGKDKFGEEMKKNSKLAGVNVHYYED-ESASTGTCAVCV--V-GGERSLVANLSAANCYKSEHLKKPENWALVEKAK 159 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~~-~~~~t~~~~~~~--~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 159 (341)
+|.+|+| +|+.+++.|+++||+++++.. ++.+|....-.. + ++++.+....+....+.++. ...++++|
T Consensus 49 ig~vG~D-~g~~~~~~L~~~gVd~~~v~~~~~~~T~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 121 (313)
T 3kd6_A 49 VGVVGSD-FGKEHFDLLHAKNIDTRGIQVIEDGKTFRWAGRYHYDMNTRDTLDTQLNVFAEFDPHV------PQYYRDSK 121 (313)
T ss_dssp EEEEETT-SCHHHHHHHHHTTEEEEEEEEETTCCCEEEEEEECTTSSCEEEEEEECGGGTTCCCCC------CGGGTTCS
T ss_pred EEecCCC-cHHHHHHHHHHcCCCccceEEcCCCCeeeeeeeeeccccccceeecccchHhhcCccc------hHHHccCC
Confidence 9999999 999999999999999999854 445563321111 1 33444444444434444322 24578999
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHH
Q 019448 160 YFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEE 239 (341)
Q Consensus 160 ~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~ 239 (341)
++++++ ++++....+++.+ +.+.++++||. ..|.....+.++++++++|++++|++|++.|++ .+++++
T Consensus 122 ~v~~~~----~~~~~~~~~~~~~-~~~~~v~~Dp~-~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g-----~~~~~~ 190 (313)
T 3kd6_A 122 FVCLGN----IDPELQLKVLDQI-DDPKLVVCDTM-NFWIEGKPEELKKVLARVDVFIVNDSEARLLSG-----DPNLVK 190 (313)
T ss_dssp EEEECS----SCHHHHHHHHTTC-SSCSEEEEECC-HHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHS-----CSCHHH
T ss_pred EEEEcC----CCHHHHHHHHHHH-hhCCEEEEcCh-hhhhhhhHHHHHHHHhcCCEEEeCHHHHHHHhC-----CCCHHH
Confidence 999965 3566667777766 56788999995 456555667788999999999999999999987 357889
Q ss_pred HHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCC-----CHHH
Q 019448 240 IALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK-----PIEE 314 (341)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~-----~~~~ 314 (341)
+++.+ .+.|++.||||+|++|++++++++.+++|++++ .+++||+||||+|+|||+++|++|+ ++++
T Consensus 191 ~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~--~~vvdttGAGDaf~a~~~~~l~~g~~~~~~~l~~ 262 (313)
T 3kd6_A 191 TARII------REMGPKTLIIKKGEHGALLFTDNGIFAAPAFPL--ESIYDPTGAGDTFAGGFIGHLARCGNTSEAEMRK 262 (313)
T ss_dssp HHHHH------HTTSCSEEEEECTTSCEEEEETTEEEEECCCTT--CCCSCCTTHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_pred HHHHH------HHcCCCEEEEeeCCCcEEEEECCceEEeCCCCC--CCcCCCCCccHHHHHHHHHHHHcCCCccccCHHH
Confidence 99998 667899999999999999999998888887654 2689999999999999999999998 8999
Q ss_pred HHHHHHHHhhhhhhhcccc---CCCCCCC
Q 019448 315 CVRAGCYTSHVIIQRSGCT---YPEKPEF 340 (341)
Q Consensus 315 a~~~a~~~Aa~~v~~~g~~---~p~~~~~ 340 (341)
|+++|+++|+++|++.|+. .|+.+|+
T Consensus 263 a~~~a~~~aa~~v~~~G~~~~~~~~~~ev 291 (313)
T 3kd6_A 263 AVLYGSAMASFCVEQFGPYRYNDLDLLEV 291 (313)
T ss_dssp HHHHHHHHHHHHTTSSTTGGGGTCCHHHH
T ss_pred HHHHHHHHHHHHHeecCCCCCCCCCHHHH
Confidence 9999999999999999995 4666553
No 46
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=100.00 E-value=1.3e-42 Score=312.38 Aligned_cols=285 Identities=16% Similarity=0.172 Sum_probs=229.6
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
.+++.|++.+|+++.++ + +..++..+..+....+||++.|+|+++++ ||.++.++|
T Consensus 2 i~tvt~n~~~D~~~~~~--------------------~-~~~g~~~~~~~~~~~~GG~~~N~A~~la~---LG~~~~~~~ 57 (306)
T 2jg5_A 2 IYTVTFNPSIDYVIFTN--------------------D-FKIDGLNRATATYKFAGGKGINVSRVLKT---LDVESTALG 57 (306)
T ss_dssp EEEEESSCEEEEEEECS--------------------S-CCTTSEEECSEEEEEEESHHHHHHHHHHH---TTCCCEEEE
T ss_pred EEEEecCceEEEEEEcC--------------------C-cccCceEEeceeEecCCchHHHHHHHHHH---cCCCeeEEE
Confidence 57899999999999987 2 34455555567788999999999999998 469999999
Q ss_pred eeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhh---hccceEEE
Q 019448 86 CIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWAL---VEKAKYFY 162 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~v~ 162 (341)
.+|+ .+|+.+++.|++.||+++++...+ .|+.++.+ .+|+++.+...++ .++++++.. .... ++++|+++
T Consensus 58 ~vG~-~~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~-~~g~~~~~~~~g~--~~~~~~~~~--~~~~~~~~~~~~~v~ 130 (306)
T 2jg5_A 58 FAGG-FPGKFIIDTLNNSAIQSNFIEVDE-DTRINVKL-KTGQETEINAPGP--HITSTQFEQ--LLQQIKNTTSEDIVI 130 (306)
T ss_dssp EECH-HHHHHHHHHHHHTTCEECCEECSS-CCEEEEEE-ESSSEEEEECCCC--CCCHHHHHH--HHHHHTTCCTTCEEE
T ss_pred EecC-cchHHHHHHHHHCCCceeEEEcCC-CCeEEEEE-cCCCEEEEECCCC--CCCHHHHHH--HHHHHHhccCCCEEE
Confidence 9999 699999999999999999986543 47777665 6777766555443 355554432 1111 57899999
Q ss_pred Eecccc-ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC-CCcEEecCHHHHHHHhhhcCCCCCCHHHH
Q 019448 163 IAGFFL-TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP-YMDYIFGNETEARTFSKVQGWETDDVEEI 240 (341)
Q Consensus 163 i~~~~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~-~~dvl~~n~~E~~~l~~~~~~~~~d~~~~ 240 (341)
++++.. ..+.+.+..+++.+++++.++++|+.... +.++++ ++|++++|++|++.|++....+.+++.++
T Consensus 131 ~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~--------~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~ 202 (306)
T 2jg5_A 131 VAGSVPSSIPSDAYAQIAQITAQTGAKLVVDAEKEL--------AESVLPYHPLFIKPNKDELEVMFNTTVNSDADVIKY 202 (306)
T ss_dssp EESCCCTTSCTTHHHHHHHHHHHHCCEEEEECCHHH--------HHHHGGGCCSEECCBHHHHHHHTTSCCCSHHHHHHH
T ss_pred EeCCCCCCCChHHHHHHHHHHHHCCCEEEEECChHH--------HHHHHhcCCeEEecCHHHHHHHhCCCCCCHHHHHHH
Confidence 987653 23467888999999999999999997532 456677 69999999999999987533222355677
Q ss_pred HHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHH
Q 019448 241 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGC 320 (341)
Q Consensus 241 ~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~ 320 (341)
++.+ .+.|++.+|||+|++|++++++++.+++|++++ +++||+||||+|+|||+++|++|+++++|+++|+
T Consensus 203 ~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~ 273 (306)
T 2jg5_A 203 GRLL------VDKGAQSVIVSLGGDGAIYIDKEISIKAVNPQG---KVVNTVGSGDSTVAGMVAGIASGLSIEKAFQQAV 273 (306)
T ss_dssp HHHH------HHTTCSCEEEECGGGCEEEECSSEEEEEECCCC---CCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHH------HHcCCCEEEEccCCCceEEEeCCcEEEEeCCcc---cccCCcChHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 7777 566889999999999999998888888887654 7899999999999999999999999999999999
Q ss_pred HHhhhhhhhccccCCCCCCC
Q 019448 321 YTSHVIIQRSGCTYPEKPEF 340 (341)
Q Consensus 321 ~~Aa~~v~~~g~~~p~~~~~ 340 (341)
++|+++|++.| +|+.+|+
T Consensus 274 a~aa~~v~~~G--~~~~~ev 291 (306)
T 2jg5_A 274 ACGTATAFDED--LATRDAI 291 (306)
T ss_dssp HHHHHHHTSSS--SCCHHHH
T ss_pred HHHHHHHcCCC--CCCHHHH
Confidence 99999999999 7876653
No 47
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=3.5e-42 Score=308.18 Aligned_cols=277 Identities=19% Similarity=0.229 Sum_probs=219.7
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i 84 (341)
++|+|+|++++|++. . ...+||++.|+|+++++ ||.++.++
T Consensus 4 ~~v~viG~~~~D~~p-----------------------~-------------~~~~GG~~~N~A~~la~---LG~~~~~~ 44 (296)
T 2qhp_A 4 NIIVGMGEALWDVLP-----------------------E-------------GKKIGGAPANFAYHVSQ---FGFDSRVV 44 (296)
T ss_dssp CEEEEESCCEEEEET-----------------------T-------------EEEEECHHHHHHHHHHH---TTCEEEEE
T ss_pred ceEEEEchhheEecC-----------------------C-------------CCCCCCHHHHHHHHHHH---cCCCeeEE
Confidence 489999999999972 0 26899999999999998 46999999
Q ss_pred eeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeecccc-cccCCcccCCCcchhhhhccceEE
Q 019448 85 GCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSA-ANCYKSEHLKKPENWALVEKAKYF 161 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~v 161 (341)
|.+|+|.+|+.+++.|++.|| +++. .++.+|+.+++.++ +|+|++....+. ...+.+.+ .....++++|++
T Consensus 45 ~~vG~D~~g~~~~~~l~~~gv--~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~v 118 (296)
T 2qhp_A 45 SAVGNDELGDEIMEVFKEKQL--KNQIERVDYPTGTVQVTLDDEGVPCYEIKEGVAWDNIPFTD----ELKRLALNTRAV 118 (296)
T ss_dssp EEEESSHHHHHHHHHHHHTTC--CEEEEEESSCCEEEEEC------CCEEECSSCGGGCCCCCH----HHHHHHHTEEEE
T ss_pred EEeCCChHHHHHHHHHHHcCC--CEEeecCCCCceEEEEEECCCCCEEEEEecCChhhhCCcch----hhHhhhcCCCEE
Confidence 999999999999999999999 6554 44667888877776 688777655443 22343221 123567899999
Q ss_pred EEecccc--ccCHHHHHHHHHHHHh-CCCeEEEeCCc--hhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCC
Q 019448 162 YIAGFFL--TVSPDSIQLVAEHAAA-NNKVFMMNLSA--PFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDD 236 (341)
Q Consensus 162 ~i~~~~~--~~~~~~~~~~~~~a~~-~~~~v~~d~~~--~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d 236 (341)
|++++.. +.+.+.+..+++.+++ ++.++++|+.. ..|. .+.++++++++|++++|++|++.|++....+.++
T Consensus 119 ~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~v~~D~~~~~~~~~---~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~ 195 (296)
T 2qhp_A 119 CFGSLAQRNEVSRATINRFLDTMPDIDGQLKIFDINLRQDFYT---KEVLRESFKRCNILKINDEELVTISRMFGYPGID 195 (296)
T ss_dssp EECSGGGSSHHHHHHHHHHHHHSCCTTSCEEEEECCCCTTCCC---HHHHHHHHHHCSEEEEEHHHHHHHHHHTTCTTSC
T ss_pred EECChHhcChHHHHHHHHHHHHHHhcCCCEEEEECcCCccccC---HHHHHHHHHHCCEEECCHHHHHHHhcccCCCCCC
Confidence 9987543 2245678888888877 68899999853 2221 3456778899999999999999999865545578
Q ss_pred HHHHHHHHhcCCcccc-CCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHH
Q 019448 237 VEEIALKLSQWPKASE-IRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEEC 315 (341)
Q Consensus 237 ~~~~~~~l~~~~~~~~-~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a 315 (341)
++++++++ .+ .|++.+|||+|++|++++++++.+++|++++ +++||+||||+|+|||+++|++|+++++|
T Consensus 196 ~~~~~~~l------~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vdttGAGD~f~a~~~~~l~~g~~~~~a 266 (296)
T 2qhp_A 196 LQDKCWIL------LAKYNLKMLILTCGINGSYVFTPGVVSFQETPKV---PVADTVGAGDSFTAAFCASILNGKSVPEA 266 (296)
T ss_dssp HHHHHHHH------HHHTTCSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHHTCCHHHH
T ss_pred HHHHHHHH------HHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCC---ccccCCCchHHHHHHHHHHHHcCCCHHHH
Confidence 88888888 44 3789999999999999999888888887654 78999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhccccCCCCC
Q 019448 316 VRAGCYTSHVIIQRSGCTYPEKP 338 (341)
Q Consensus 316 ~~~a~~~Aa~~v~~~g~~~p~~~ 338 (341)
+++|+++|+.++++.|+..+.++
T Consensus 267 ~~~a~~~aa~~v~~~G~~~~~~~ 289 (296)
T 2qhp_A 267 HKLAVEVSAYVCTQSGAMPELPV 289 (296)
T ss_dssp HHHHHHHHHHHHTSSSSSCCCCH
T ss_pred HHHHHHHHHHHHcCCCCCCCCcH
Confidence 99999999999999999655443
No 48
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=5.6e-42 Score=314.07 Aligned_cols=295 Identities=16% Similarity=0.173 Sum_probs=230.6
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i 84 (341)
++|+++|+.+.++..... ....+..+....+||+++|+|+++++ ||.++.++
T Consensus 13 ~~~~~~ge~l~~~~~~~~-------------------------~~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~i 64 (351)
T 2afb_A 13 MKVVTFGEIMLRLSPPDH-------------------------KRIFQTDSFDVTYGGAEANVAAFLAQ---MGLDAYFV 64 (351)
T ss_dssp CEEEEESCCEEEEECSTT-------------------------CCGGGCSEEEEEEECHHHHHHHHHHH---TTSEEEEE
T ss_pred ceEEEechhhheecCCCC-------------------------ccccccceeeEecCChHHHHHHHHHH---cCCCeEEE
Confidence 589999999988764221 11234456788999999999999998 46999999
Q ss_pred eeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccc-eeeccc---ccccCCcccCCCcchhhhhccceE
Q 019448 85 GCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERS-LVANLS---AANCYKSEHLKKPENWALVEKAKY 160 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~-~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~ 160 (341)
|.+|+|.+|+.+++.|++.||+++++...+.+|+.+++..++++|. ++.+.. +...++++++.. ...+.++++
T Consensus 65 ~~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~t~~~~v~~~~~~r~~~v~~~~~~~a~~~~~~~~~~~---~~~~~~~~~ 141 (351)
T 2afb_A 65 TKLPNNPLGDAAAGHLRKFGVKTDYIARGGNRIGIYFLEIGASQRPSKVVYDRAHSAISEAKREDFDW---EKILDGARW 141 (351)
T ss_dssp EEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCEEEEECCBTTBCCEEEEECTTCTTTTCCGGGCCH---HHHTTTEEE
T ss_pred EEeCCCHHHHHHHHHHHHcCCcceeEEECCCcceEEEEEecCCCCcceEEEeCCCChhhhCChhhCCH---HHhhcCCCE
Confidence 9999999999999999999999998865556788776655556554 344332 223556665541 234689999
Q ss_pred EEEeccccccC---HHHHHHHHHHHHhCCCeEEEeCCc--hhHH-HHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCC--
Q 019448 161 FYIAGFFLTVS---PDSIQLVAEHAAANNKVFMMNLSA--PFIC-EFFKDALEKVLPYMDYIFGNETEARTFSKVQGW-- 232 (341)
Q Consensus 161 v~i~~~~~~~~---~~~~~~~~~~a~~~~~~v~~d~~~--~~~~-~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~-- 232 (341)
+|++++.+..+ .+.+.++++.++++++++++||.. ..|. ...++.+.++++++|++++|++|++.|++....
T Consensus 142 v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~ 221 (351)
T 2afb_A 142 FHFSGITPPLGKELPLILEDALKVANEKGVTVSCDLNYRARLWTKEEAQKVMIPFMEYVDVLIANEEDIEKVLGISVEGL 221 (351)
T ss_dssp EEEETTSGGGSTTHHHHHHHHHHHHHHHTCEEEEECCCCTTTCCHHHHHHHHHHHGGGCSEEEECHHHHHHHHCCCCSCC
T ss_pred EEEeCcccccChhHHHHHHHHHHHHHHcCCEEEEeCCCchhcCChHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCcccc
Confidence 99998765433 377889999999999999999973 2232 124566788999999999999999999875321
Q ss_pred -------CCCCHHHHHHHHhcCCccccC-CccEEEEEeCCCce--------EEEECCeeEEEeceecCCCcccCCCCCch
Q 019448 233 -------ETDDVEEIALKLSQWPKASEI-RKRTAVITQGADPV--------VVAQDGKLKKFPVIVLPKDKLVDTNGAGD 296 (341)
Q Consensus 233 -------~~~d~~~~~~~l~~~~~~~~~-~~~~vvvt~G~~G~--------~~~~~~~~~~~~~~~~~~~~~vd~tGAGD 296 (341)
+.+++.++++.+ .+. |++.||||+|++|+ +++++++.+++|++++ +++|||||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~l------~~~~g~~~vvvT~G~~G~~~~~~~g~~~~~~~~~~~~~~~~v---~vvdttGAGD 292 (351)
T 2afb_A 222 DLKTGKLNREAYAKIAEEV------TRKYNFKTVGITLRESISATVNYWSVMVFENGQPHFSNRYEI---HIVDRVGAGD 292 (351)
T ss_dssp -------CHHHHHHHHHHH------HHHHCCSEEEEEEEECSCSSEEEEEEEEEETTEEEECCCEEE---ECSCCTTHHH
T ss_pred cccccccchhhHHHHHHHH------HHHcCCCEEEEEeCCcCccccccceeEEEeCCcEEEcCCCCC---ccCCCCCchH
Confidence 122355667776 443 78999999999975 7777888888888776 7899999999
Q ss_pred hhHHHHHHHHhcCCCHHHHHHHHHHHhhhhhhhccc-cCCCCCC
Q 019448 297 AFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGC-TYPEKPE 339 (341)
Q Consensus 297 af~ag~~~~l~~g~~~~~a~~~a~~~Aa~~v~~~g~-~~p~~~~ 339 (341)
+|+|||+++|++|+++++|+++|+++|++++++.|+ .+|+.+|
T Consensus 293 aF~ag~~~~l~~g~~l~~a~~~A~~~aa~~v~~~G~~~~~~~~e 336 (351)
T 2afb_A 293 SFAGALIYGSLMGFDSQKKAEFAAAASCLKHTIPGDFVVLSIEE 336 (351)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTSSSSSCCCCHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 999999999999999999999999999999999998 5676654
No 49
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=100.00 E-value=1.6e-42 Score=311.53 Aligned_cols=270 Identities=21% Similarity=0.255 Sum_probs=218.0
Q ss_pred CCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEE
Q 019448 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATS 82 (341)
Q Consensus 3 ~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~ 82 (341)
++++|+|+|++++|++..++ ++| .++..........+||+++|+|+++++ ||.++.
T Consensus 19 ~~~~v~viG~~~iD~~~~~~--------------------~~p-~g~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~ 74 (306)
T 3bf5_A 19 GMRFLAYFGHLNIDVLISVD--------------------SIP-REGSVNVKDLRPRFGGTAGNFAIVAQK---FRIPFD 74 (306)
T ss_dssp CCEEEEEECCCEEEEEEECS--------------------CCC-SSEEEECSEEEEEEEHHHHHHHHHHHH---TTCCCE
T ss_pred CCCcEEEECCceEEEEEecC--------------------CCC-CCceEECcceEecCCChHHHHHHHHHH---cCCCeE
Confidence 45689999999999999887 344 444444556778999999999999998 469999
Q ss_pred EEeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccceEE
Q 019448 83 YIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYF 161 (341)
Q Consensus 83 ~i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 161 (341)
++|.+|+| +|+.+++.|++.||+++++. .++.+|+.+++++++|+|+++.+.++...++ +++. .+++++
T Consensus 75 ~i~~vG~D-~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~g~r~~~~~~ga~~~~~-~~l~--------~~~~~v 144 (306)
T 3bf5_A 75 LYSAVGMK-THREYLAMIESMGINTGHVEKFEDESGPICYIATDGKKQVSFMHQGAMAAWA-PQLA--------DEYEYV 144 (306)
T ss_dssp EEEEEETT-TCHHHHHHHHHTTCCCTTEEEETTCCCSEEEEEECSSCEEEEEECTHHHHCC-CCCC--------SCEEEE
T ss_pred EEEEEeCC-hHHHHHHHHHHcCCCchheEecCCCCCceEEEEEcCCeeEEEEeCChhhhhh-Hhhc--------CCCCEE
Confidence 99999999 99999999999999999874 5666799998888778888877777665665 3331 689999
Q ss_pred EEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHH
Q 019448 162 YIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIA 241 (341)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~ 241 (341)
|+++.. .+.++++.+++ ++++|+....|. ...+.++++++++|++++|++|++.+++....+..
T Consensus 145 ~~~~~~------~~~~~~~~a~~---~v~~D~~~~~~~-~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~------ 208 (306)
T 3bf5_A 145 HFSTGP------NYLDMAKSIRS---KIIFDPSQEIHK-YSKDELKKFHEISYMSIFNDHEYRVFREMTGLSSP------ 208 (306)
T ss_dssp EECSSS------SHHHHHHHCCS---EEEECCGGGGGG-SCHHHHHHHHHHCSEEEEEHHHHHHHHHHHCCSSC------
T ss_pred EECChH------HHHHHHHHhCC---cEEEcCchhhhh-ccHHHHHHHHhcCCEEEcCHHHHHHHhCCCCcCcc------
Confidence 998743 45666666654 899999854332 12455678889999999999999999875322110
Q ss_pred HHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHH
Q 019448 242 LKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCY 321 (341)
Q Consensus 242 ~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~ 321 (341)
.+ . +|||+|++|++++++++.+++|++++ + +|||||||+|+|||+++|++|+++++|+++|++
T Consensus 209 -~l------~------vvvT~G~~Ga~~~~~~~~~~~~~~~v---~-vDttGAGDaF~ag~~~~l~~g~~~~~a~~~A~~ 271 (306)
T 3bf5_A 209 -KV------T------TIVTNGERGSSLFMDGKKYDFPAIPS---S-GDTVGAGDSFRAGLYLALYNRRSIEKGMIYGTI 271 (306)
T ss_dssp -SS------C------EEEEEGGGEEEEEETTEEEEEECCCC---C-SCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred -cE------E------EEEeecccCeEEEeCCcEEEecCCcC---C-CCCCCccHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 12 1 99999999999998888888887754 7 999999999999999999999999999999999
Q ss_pred Hhhhhhhh--ccc--cCCCCCC
Q 019448 322 TSHVIIQR--SGC--TYPEKPE 339 (341)
Q Consensus 322 ~Aa~~v~~--~g~--~~p~~~~ 339 (341)
+|+++|++ .|+ .+|+.+|
T Consensus 272 ~aa~~v~~~~~G~~~~~p~~~e 293 (306)
T 3bf5_A 272 IAHHVIDDGIENFSLNMEDLER 293 (306)
T ss_dssp HHHHHHHHCSTTCCCCHHHHHH
T ss_pred HHHHHhccCCccccccCCCHHH
Confidence 99999999 998 4565443
No 50
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=3.4e-38 Score=282.43 Aligned_cols=257 Identities=15% Similarity=0.108 Sum_probs=200.1
Q ss_pred ccCCceEecCchHHHHHHHHHHHhcCCCcEEEEeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccce
Q 019448 52 SKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSL 131 (341)
Q Consensus 52 ~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~ 131 (341)
+..+....+||++.|+|+++++ ||.++.++|.+|+|. +.+++.|++.||+++++.. ..+|+.+.++..+|++++
T Consensus 27 ~~~~~~~~~GG~~~NvA~~la~---LG~~~~~i~~vG~D~--~~~~~~L~~~gVd~~~v~~-~~~t~~~~i~~~~g~~~~ 100 (298)
T 1vk4_A 27 VDGKREIAYGGGVVMGAITSSL---LGVKTKVITKCTRED--VSKFSFLRDNGVEVVFLKS-PRTTSIENRYGSDPDTRE 100 (298)
T ss_dssp ETTEEEEEEECHHHHHHHHHHH---TTCEEEEEEEECTTT--GGGGTTTGGGTCEEEEEEC-SSCEEEEEEC-----CCE
T ss_pred ecCeEEEecCCHHHHHHHHHHH---cCCceEEEEEEcCCH--HHHHHHHHHcCCceEEEec-CCCcEEEEEEcCCCCeeE
Confidence 3345678999999999999998 469999999999997 7788999999999998865 345665544433688887
Q ss_pred eecccccccCCcccCCCcchhhhhccceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhH---H----HHHHH
Q 019448 132 VANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFI---C----EFFKD 204 (341)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~---~----~~~~~ 204 (341)
+...++...++++++.. ..+++++++++.. .+....+++.+++++.++++|+.+... . ...++
T Consensus 101 ~~~~~~~~~l~~~~~~~-------~~~~~v~~~~~~~---~~~~~~~~~~~~~~g~~v~~D~~~~~~~~~~~~~~~~~~~ 170 (298)
T 1vk4_A 101 SFLISAADPFTESDLAF-------IEGEAVHINPLWY---GEFPEDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDWE 170 (298)
T ss_dssp EEEEECCCCCCGGGGGG-------CCSSEEEECCSST---TSSCGGGHHHHHHHCSEEEEETHHHHEEEETTEEEECCCT
T ss_pred EEeccccccCCHHHcCc-------CCCCEEEECCccc---ccccHHHHHHHHHcCCEEEEecCccccccccccccccchH
Confidence 77666666676666531 5789999987642 122245667778889999999963110 0 00112
Q ss_pred HHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecC
Q 019448 205 ALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLP 284 (341)
Q Consensus 205 ~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~ 284 (341)
.+.++++++|++++|++|++.|++. .+++++++.+ .+.|++.||||+ ++|++++++ +.+++|+++
T Consensus 171 ~~~~~l~~~dil~~N~~E~~~l~g~-----~~~~~~~~~l------~~~g~~~vvvT~-~~G~~~~~~-~~~~~~~~~-- 235 (298)
T 1vk4_A 171 MKEKYLKYLDLFKVDSREAETLTGT-----NDLRESCRII------RSFGAKIILATH-ASGVIVFDG-NFYEASFRS-- 235 (298)
T ss_dssp THHHHGGGCSEEEEEHHHHHHHHSC-----SCHHHHHHHH------HHTTCSSEEEEE-TTEEEEESS-SEEEEECCC--
T ss_pred HHHhhcccCCEEecCHHHHHHHhCC-----CCHHHHHHHH------HhcCCCEEEEEc-CCCcEEEeC-CEEEeccCC--
Confidence 3567899999999999999999873 4788888888 567889999999 999999877 777888654
Q ss_pred CCcccCCCCCchhhHHHHHHHHhc-CCCHHHHHHHHHHHhhhhhhhccc-cCCCCCCC
Q 019448 285 KDKLVDTNGAGDAFVGGFLSQLVQ-EKPIEECVRAGCYTSHVIIQRSGC-TYPEKPEF 340 (341)
Q Consensus 285 ~~~~vd~tGAGDaf~ag~~~~l~~-g~~~~~a~~~a~~~Aa~~v~~~g~-~~p~~~~~ 340 (341)
++++|||||||+|+|||+++|++ |+++++|+++|+++|+++|++.|+ ..|+.+|+
T Consensus 236 -v~vvDttGAGDaF~a~~~~~l~~~g~~~~~a~~~A~a~aa~~v~~~G~~~~~~~~el 292 (298)
T 1vk4_A 236 -WSLEGRTGRGDTCTAAFLVGFVFKKMSIEKATKFAAAVTSVKMRHPGPLRREDLEAI 292 (298)
T ss_dssp -SSGGGGTTHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHTTSSSSCCGGGGGGC
T ss_pred -cccCCCcCccHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHccCCCCCCCCHHHH
Confidence 48999999999999999999999 999999999999999999999999 44676665
No 51
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=99.92 E-value=1e-25 Score=202.67 Aligned_cols=222 Identities=17% Similarity=0.173 Sum_probs=153.4
Q ss_pred cEEEEeeeecCchhHHHHHHHHhcCcceeeeecC--CCCceeEEEEEeCCccceeecccccccCCcccCCCc-chhhh--
Q 019448 80 ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDE--SASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKP-ENWAL-- 154 (341)
Q Consensus 80 ~v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~--~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~-- 154 (341)
.+.++|.+|+|. |+.+ |+++||+++++... ...|+..+ ..+ ..++++++... +.+..
T Consensus 12 ~~~~~g~vG~D~-g~~i---L~~~GV~~~~v~~~~~~~~t~~~~------------~~g--~~l~~~~i~~~~~~~~~~~ 73 (312)
T 2yxt_A 12 SHVIRGYVGNRA-ATFP---LQVLGFEIDAVNSVQFSNHTGYAH------------WKG--QVLNSDELQELYEGLRLNN 73 (312)
T ss_dssp EEESSSCSTHHH-HHHH---HHHTTCEEEEEEEEEESSCTTSSC------------CCE--EECCHHHHHHHHHHHHHTT
T ss_pred cccCCCccchHh-hHHH---HHHcCCeEEEEEEEEecCCCCcCC------------ccC--ccCCHHHHHHHHHHHHhcC
Confidence 467889999998 9988 99999999987531 11222111 111 23444544320 01111
Q ss_pred hccceEEEEeccccccCHHHHHHHHHHHHhCCC--eEEEeCCch--------hH-HHHHHHHHHh-hcCCCcEEecCHHH
Q 019448 155 VEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNK--VFMMNLSAP--------FI-CEFFKDALEK-VLPYMDYIFGNETE 222 (341)
Q Consensus 155 l~~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~--~v~~d~~~~--------~~-~~~~~~~~~~-~l~~~dvl~~n~~E 222 (341)
+.++++++++........+.+.++++.+++++. ++++||... .| .....+.+++ +++++|++++|++|
T Consensus 74 ~~~~~~v~~G~~~~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~~~~~~~l~~~ll~~~dil~pN~~E 153 (312)
T 2yxt_A 74 MNKYDYVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPEDLLPVYKEKVVPLADIITPNQFE 153 (312)
T ss_dssp CCCCSEEEECCCCCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSCTTHHHHHHHTTGGGCSEECCCHHH
T ss_pred CccCCEEEECCCCCHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCCHHHHHHHHHHhhhhCCEEcCCHHH
Confidence 567899876432111113556688888888875 488997421 11 1123445654 89999999999999
Q ss_pred HHHHhhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCC------ceEEE-------EC-C----eeEEEeceecC
Q 019448 223 ARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGAD------PVVVA-------QD-G----KLKKFPVIVLP 284 (341)
Q Consensus 223 ~~~l~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~------G~~~~-------~~-~----~~~~~~~~~~~ 284 (341)
++.|++....+.+++.++++++ .+.|++.||||.|.. |++++ ++ + +.++++++++
T Consensus 154 a~~L~g~~~~~~~~~~~~~~~l------~~~g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~v- 226 (312)
T 2yxt_A 154 AELLSGRKIHSQEEALRVMDML------HSMGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDIRKV- 226 (312)
T ss_dssp HHHHHSCCCCSHHHHHHHHHHH------HHHSCSEEEECCCSCCCTTCTTEEEEEEEEEC----CCCCEEEEEEEEECC-
T ss_pred HHHHhCCCCCCHHHHHHHHHHH------HHcCCCEEEEecccCCCCCCCceEEEEEeccccccccccccceEEEeeccc-
Confidence 9999885433335667778887 567889999998876 47665 44 2 5677777654
Q ss_pred CCcccCCCCCchhhHHHHHHHHhc-CCCHHHHHHHHHHHhhhhhhh
Q 019448 285 KDKLVDTNGAGDAFVGGFLSQLVQ-EKPIEECVRAGCYTSHVIIQR 329 (341)
Q Consensus 285 ~~~~vd~tGAGDaf~ag~~~~l~~-g~~~~~a~~~a~~~Aa~~v~~ 329 (341)
++ ||+||||+|+|+|+++|++ |+++++|+++|+++|+.++++
T Consensus 227 --~v-dttGAGDaf~a~~~~~l~~~g~~l~~a~~~A~a~a~~~v~~ 269 (312)
T 2yxt_A 227 --DA-VFVGTGDLFAAMLLAWTHKHPNNLKVACEKTVSTLHHVLQR 269 (312)
T ss_dssp --SS-CCSSHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH
T ss_pred --CC-CCCCchHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 55 9999999999999999999 999999999999999888864
No 52
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=99.91 E-value=2.3e-24 Score=191.19 Aligned_cols=227 Identities=14% Similarity=0.093 Sum_probs=158.1
Q ss_pred CcEEE-EeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCc-c-hhh-
Q 019448 79 GATSY-IGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKP-E-NWA- 153 (341)
Q Consensus 79 ~~v~~-i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~-~-~~~- 153 (341)
..... +|.+|.| ..+..|++.||++.++.. . ++.+ +|.+.+ .+ ..++++++... + ...
T Consensus 21 i~~~~~~g~~G~d----~~~~~l~~~Gv~~~~v~t-------~-i~~~~~g~~~~---~g--~~~~~~~~~~~~~~l~~~ 83 (283)
T 2ddm_A 21 VQSQVVYGSVGNS----IAVPAIKQNGLNVFAVPT-------V-LLSNTPHYDTF---YG--GAIPDEWFSGYLRALQER 83 (283)
T ss_dssp EEEEESSSSSTHH----HHHHHHHHTTCCEEEEEE-------E-EESSCTTSSCC---CE--EECCHHHHHHHHHHHHHT
T ss_pred EecccCCCcchHH----HHHHHHHHcCCeeeEEeE-------E-EeccCCCcCce---ee--eeCCHHHHHHHHHHHHhc
Confidence 45444 7788877 346788999999988742 1 1212 343331 11 23444443320 0 111
Q ss_pred -hhccceEEEEeccccccCHHHHHHHHHHHHh--CCCeEEEeCCch-----hHH-HH-HHHHHHhhcCCCcEEecCHHHH
Q 019448 154 -LVEKAKYFYIAGFFLTVSPDSIQLVAEHAAA--NNKVFMMNLSAP-----FIC-EF-FKDALEKVLPYMDYIFGNETEA 223 (341)
Q Consensus 154 -~l~~~~~v~i~~~~~~~~~~~~~~~~~~a~~--~~~~v~~d~~~~-----~~~-~~-~~~~~~~~l~~~dvl~~n~~E~ 223 (341)
.++++++++++........+.+.++++.+++ +++++++||... .|. .. .....+++++++|++++|++|+
T Consensus 84 ~~~~~~~~v~~G~l~~~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~E~ 163 (283)
T 2ddm_A 84 DALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFEL 163 (283)
T ss_dssp TCCTTCCEEEECCCSCHHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEECCBHHHH
T ss_pred CCcccCCEEEECCcCCHHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEecCCHHHH
Confidence 3457899998654333334677888888887 789999997422 111 11 1222346889999999999999
Q ss_pred HHHhhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCC-------ceEEEECCeeEEEeceecCCCcccCCCCCch
Q 019448 224 RTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGAD-------PVVVAQDGKLKKFPVIVLPKDKLVDTNGAGD 296 (341)
Q Consensus 224 ~~l~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~-------G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGD 296 (341)
+.|++....+.++..++++++ .+.|++.||||.|++ |++++++++.++++++++ . +|++||||
T Consensus 164 ~~L~g~~~~~~~~~~~~a~~l------~~~g~~~Vvvt~G~~~~~~~~~G~~~~~~~~~~~~~~~~v---~-vdt~GAGD 233 (283)
T 2ddm_A 164 EILTGKNCRDLDSAIAAAKSL------LSDTLKWVVVTSASGNEENQEMQVVVVTADSVNVISHSRV---K-TDLKGTGD 233 (283)
T ss_dssp HHHHTSCCSSHHHHHHHHHHH------CCSSCCEEEEEC-------CEEEEEEEETTEEEEEEEECC---C-CCCCCHHH
T ss_pred HHHhCCCCCCHHHHHHHHHHH------HHcCCCEEEEccccCccCCCceeEEEEeCCceEEEeecee---C-CCCCChHH
Confidence 999985433334567778887 667889999999999 889888888888887654 4 79999999
Q ss_pred hhHHHHHHHHhcCCCHHHHHHHHHHHhhhhhhhccc
Q 019448 297 AFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGC 332 (341)
Q Consensus 297 af~ag~~~~l~~g~~~~~a~~~a~~~Aa~~v~~~g~ 332 (341)
+|+|+|+++|++|+++++|+++|+++++.++++...
T Consensus 234 af~a~~~~~l~~g~~~~~A~~~A~a~a~~~v~~~~~ 269 (283)
T 2ddm_A 234 LFCAQLISGLLKGKALTDAVHRAGLRVLEVMRYTQQ 269 (283)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999987643
No 53
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=99.90 E-value=2e-23 Score=185.43 Aligned_cols=161 Identities=12% Similarity=0.110 Sum_probs=123.1
Q ss_pred ceEEEEeccccccCHHHHHHHHHHHHhCCCe-EEEeCCch------hHHHHHHHHHHh-hcCCCcEEecCHHHHHHHhhh
Q 019448 158 AKYFYIAGFFLTVSPDSIQLVAEHAAANNKV-FMMNLSAP------FICEFFKDALEK-VLPYMDYIFGNETEARTFSKV 229 (341)
Q Consensus 158 ~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~-v~~d~~~~------~~~~~~~~~~~~-~l~~~dvl~~n~~E~~~l~~~ 229 (341)
+|++++.. ..+.+.+..+++.+++.+.+ +++||... .|.....+.+.+ +++++|++++|+.|++.|++.
T Consensus 95 ~~~v~~G~---l~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~g~~l~~~~~~~~l~~~ll~~~dil~pN~~Ea~~L~g~ 171 (288)
T 1jxh_A 95 IDTTKIGM---LAETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAALLDA 171 (288)
T ss_dssp CSEEEECC---CCSHHHHHHHHHHHHHTTCCSEEEECCCC------CCCHHHHHHHHHHTGGGCSEEECBHHHHHHHHTC
T ss_pred CCEEEECC---CCCHHHHHHHHHHHHHCCCCeEEEcCcccCCCCCccCCHHHHHHHHHHHHhhCcEEcCCHHHHHHHcCC
Confidence 68887753 22678889999999999986 99998542 122222233554 789999999999999999875
Q ss_pred -cCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCc-----eEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHH
Q 019448 230 -QGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADP-----VVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL 303 (341)
Q Consensus 230 -~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G-----~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~ 303 (341)
...+.++..++++++ .+.+++.||||.|++| ++++++++.++++++++ +++|++||||+|+|+|+
T Consensus 172 ~~~~~~~~~~~~a~~l------~~~g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~---~~vdttGAGD~f~a~~~ 242 (288)
T 1jxh_A 172 PHARTEQEMLAQGRAL------LAMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRV---NTKNTHGTGCTLSAALA 242 (288)
T ss_dssp CCCCSHHHHHHHHHHH------HHTTCSEEEEBC---------CEEECSSCEEEC---CC---CCSCCBTHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH------HHhCCCEEEEeccCCCCCceeEEEEECCeEEEEecccc---CCCCCCCchHHHHHHHH
Confidence 333334566777887 5678899999999999 88887777777776544 78999999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHhhhhhhhc
Q 019448 304 SQLVQEKPIEECVRAGCYTSHVIIQRS 330 (341)
Q Consensus 304 ~~l~~g~~~~~a~~~a~~~Aa~~v~~~ 330 (341)
++|++|+++++|+++|+++++.++++.
T Consensus 243 a~l~~g~~~~~A~~~A~a~a~~~v~~~ 269 (288)
T 1jxh_A 243 ALRPRHRSWGETVNEAKAWLSAALAQA 269 (288)
T ss_dssp HHGGGSSSHHHHHHHHHHHHHHHHTTG
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999766
No 54
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=99.88 E-value=5.2e-22 Score=173.62 Aligned_cols=162 Identities=16% Similarity=0.200 Sum_probs=126.1
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhCC-CeEEEeCCch------hHHHHHHHHH-HhhcCCCcEEecCHHHHHHHhh
Q 019448 157 KAKYFYIAGFFLTVSPDSIQLVAEHAAANN-KVFMMNLSAP------FICEFFKDAL-EKVLPYMDYIFGNETEARTFSK 228 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~-~~v~~d~~~~------~~~~~~~~~~-~~~l~~~dvl~~n~~E~~~l~~ 228 (341)
+.+.+++... .+.+.+..+++.+++++ .++++||... .|.....+.+ .++++++|++++|++|++.|++
T Consensus 70 ~~~~v~~G~l---~~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~g~~l~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g 146 (258)
T 1ub0_A 70 PLHAAKTGAL---GDAAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNRLEAEALLG 146 (258)
T ss_dssp CCSEEEECCC---CSHHHHHHHHHHHHHTTCCSEEECCCC---------CHHHHHHHHHHTGGGCSEECCBHHHHHHHHC
T ss_pred CCCEEEECCc---CCHHHHHHHHHHHHhCCCCcEEECCeeecCCCCcccChHHHHHHHHhhcccCeEEeCCHHHHHHHhC
Confidence 3677776532 25677888889999988 8999998532 2222222334 4688999999999999999987
Q ss_pred hcCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCC-c----eEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHH
Q 019448 229 VQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGAD-P----VVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL 303 (341)
Q Consensus 229 ~~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~-G----~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~ 303 (341)
....+.++..++++++ .+.|++.||+|.|++ | ++++++++.++++++++ +++||+||||+|+|+|+
T Consensus 147 ~~~~~~~~~~~~a~~l------~~~g~~~vvvt~g~~~G~~~~~~~~~~~~~~~~~~~~~---~~~dt~GaGD~f~a~~~ 217 (258)
T 1ub0_A 147 RPIRTLKEAEEAAKAL------LALGPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPRV---HTRNTHGTGCTLSAAIA 217 (258)
T ss_dssp SCCCSHHHHHHHHHHH------HTTSCSCEEEEEEECC---EEEEEEETTEEEEEEECCC---CCSCCTTHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH------HHcCCCEEEEccCCCCCCceEEEEEeCCeEEEEecccc---CCCCCCChHHHHHHHHH
Confidence 5433334566778887 556888999999998 8 78888888788876544 78999999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHhhhhhhhc
Q 019448 304 SQLVQEKPIEECVRAGCYTSHVIIQRS 330 (341)
Q Consensus 304 ~~l~~g~~~~~a~~~a~~~Aa~~v~~~ 330 (341)
++|++|+++++|+++|+++++.++++.
T Consensus 218 ~~l~~g~~~~~a~~~a~~~~~~~~~~~ 244 (258)
T 1ub0_A 218 ALLAKGRPLAEAVAEAKAYLTRALKTA 244 (258)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998754
No 55
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=99.83 E-value=5.7e-20 Score=161.82 Aligned_cols=162 Identities=20% Similarity=0.189 Sum_probs=127.7
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhCCC-eEEEeCCch------hHHHHHHHHHH-hhcCCCcEEecCHHHHHHHhh
Q 019448 157 KAKYFYIAGFFLTVSPDSIQLVAEHAAANNK-VFMMNLSAP------FICEFFKDALE-KVLPYMDYIFGNETEARTFSK 228 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~-~v~~d~~~~------~~~~~~~~~~~-~~l~~~dvl~~n~~E~~~l~~ 228 (341)
+.|++++... .+.+.+..+++.+++.+. ++++||... .+.+...+.+. ++++++|+++||..|++.|++
T Consensus 74 ~~d~v~~G~l---~~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L~g 150 (271)
T 2i5b_A 74 GVDAMKTGML---PTVDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQLSG 150 (271)
T ss_dssp CCSEEEECCC---CSHHHHHHHHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHHHT
T ss_pred CCCEEEECCC---CCHHHHHHHHHHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHHhC
Confidence 5788888542 246788888999999888 599998421 11222334454 788999999999999999998
Q ss_pred hc-CCCCCCHHHHHHHHhcCCccccCCccEEEEEeCC--Cce----EEEECCeeEEEeceecCCCcccCCCCCchhhHHH
Q 019448 229 VQ-GWETDDVEEIALKLSQWPKASEIRKRTAVITQGA--DPV----VVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGG 301 (341)
Q Consensus 229 ~~-~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~--~G~----~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag 301 (341)
.. ..+.++..++++++ .+.+.+.||+|.|. +|+ +++++++.++++.+.+ +++|++||||+|+|+
T Consensus 151 ~~~~~~~~~~~~~a~~l------~~~g~~~Vvvt~g~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~dt~GaGD~f~a~ 221 (271)
T 2i5b_A 151 MDELKTVDDMIEAAKKI------HALGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMI---DTPYTHGAGCTFSAA 221 (271)
T ss_dssp CCCCCSHHHHHHHHHHH------HTTTCSEEEEECGGGSCSSSEEEEEECSSCEEEEEECCC---CCSCCBTHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHH------HHhCCCEEEEcCCCCCCCCceEEEEEeCCeEEEEecccc---CCCCCCChHHHHHHH
Confidence 54 33334566778887 56788999999999 784 6777777777776544 789999999999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHhhhhhhhc
Q 019448 302 FLSQLVQEKPIEECVRAGCYTSHVIIQRS 330 (341)
Q Consensus 302 ~~~~l~~g~~~~~a~~~a~~~Aa~~v~~~ 330 (341)
|+++|++|+++++|+++|+++++.++++.
T Consensus 222 ~~~~l~~g~~~~~A~~~A~~~~~~~~~~~ 250 (271)
T 2i5b_A 222 VTAELAKGAEVKEAIYAAKEFITAAIKES 250 (271)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999865
No 56
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=99.82 E-value=7.5e-20 Score=162.36 Aligned_cols=167 Identities=11% Similarity=0.116 Sum_probs=127.2
Q ss_pred hccceEEEEecccc-ccCHHHHHHHHHHHHhCC--CeEEEeC----C--chhHHHHHHHHHHh-hcCCCcEEecCHHHHH
Q 019448 155 VEKAKYFYIAGFFL-TVSPDSIQLVAEHAAANN--KVFMMNL----S--APFICEFFKDALEK-VLPYMDYIFGNETEAR 224 (341)
Q Consensus 155 l~~~~~v~i~~~~~-~~~~~~~~~~~~~a~~~~--~~v~~d~----~--~~~~~~~~~~~~~~-~l~~~dvl~~n~~E~~ 224 (341)
+.+.|++.+ |+.. ....+.+.++++.+++++ .++++|| . ...|.+...+.+++ +++++|+++||..|++
T Consensus 75 l~~~d~v~~-G~l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~~~~~~~l~~~ll~~~diitpN~~E~~ 153 (289)
T 3pzs_A 75 LKDCDAVLS-GYIGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEFFCNEALPASDMIAPNLLELE 153 (289)
T ss_dssp GGGCCEEEE-CCCSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCHHHHHHHHHTHHHHCSEECCCHHHHH
T ss_pred ccCCCEEEE-CCCCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccCHHHHHHHHHHhhccCCEEeCCHHHHH
Confidence 357888654 4432 223467788888888766 7899997 2 12344444555664 7899999999999999
Q ss_pred HHhhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEEeC-CCce-------EEEECCeeEEEeceecCCCcccCCCCCch
Q 019448 225 TFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQG-ADPV-------VVAQDGKLKKFPVIVLPKDKLVDTNGAGD 296 (341)
Q Consensus 225 ~l~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G-~~G~-------~~~~~~~~~~~~~~~~~~~~~vd~tGAGD 296 (341)
.|++....+.++..++++++ .+.|++.||||.| .+|+ +++++++.++++.+.++ ..++|++|+||
T Consensus 154 ~L~g~~~~~~~~~~~aa~~l------~~~g~~~Vvvt~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~dt~GaGD 226 (289)
T 3pzs_A 154 QLSGERVENVEQAVQVARSL------CARGPKVVLVKHLSRAGYHADCFEMLLVTADDAWHICRPLVD-FGKRQPVGVGD 226 (289)
T ss_dssp HHHTSCCCSHHHHHHHHHHH------HTTSCSEEEECCCGGGSSCTTEEEEEEECSSCEEEEEEECCC-CTTSCCTTHHH
T ss_pred HHhCCCCCCHHHHHHHHHHH------HHHCCCEEEEecccCCCCCCCeEEEEEEeCCeEEEEEeeeec-CCCCCCCcHHH
Confidence 99986544445677788888 6678999999985 5786 77777777777766542 12389999999
Q ss_pred hhHHHHHHHHhcCCCHHHHHHHHHHHhhhhhhh
Q 019448 297 AFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQR 329 (341)
Q Consensus 297 af~ag~~~~l~~g~~~~~a~~~a~~~Aa~~v~~ 329 (341)
+|+|+|+++|++|+++++|+++|+++++.++++
T Consensus 227 ~f~a~~~~~l~~g~~~~~A~~~A~~~~~~~i~~ 259 (289)
T 3pzs_A 227 LTSGLLLVNLLKGEPLDKALEHVTAAVYEVMLK 259 (289)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998888764
No 57
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=99.81 E-value=6.5e-19 Score=155.45 Aligned_cols=161 Identities=17% Similarity=0.124 Sum_probs=128.2
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhC-CCeEEEeCCc----hhH---HHHHHHHHHhhcCCCcEEecCHHHHHHHhh
Q 019448 157 KAKYFYIAGFFLTVSPDSIQLVAEHAAAN-NKVFMMNLSA----PFI---CEFFKDALEKVLPYMDYIFGNETEARTFSK 228 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~a~~~-~~~v~~d~~~----~~~---~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~ 228 (341)
+.|.+.++-. .+++.+..+.+.+++. +.++++||-. ..| .+...+.++++++++|+++||..|++.|++
T Consensus 74 ~~daik~G~l---~s~~~i~~v~~~l~~~~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~~adiitpN~~Ea~~L~g 150 (282)
T 3h74_A 74 HFDQALIGYV---GSVALCQQITTYLEQQTLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQQADVILPNTTEAALLTG 150 (282)
T ss_dssp CCSEEEECCC---CSHHHHHHHHHHHHHSCCSEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCCHHHHHHHHT
T ss_pred ccCEEEECCC---CCHHHHHHHHHHHHHCCCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhccCCEECCCHHHHHHHhC
Confidence 5788887532 2566777777766664 5789999931 112 344556678899999999999999999998
Q ss_pred hcCCCCCCHHHHHHHHhcCCcccc-CCc-cEEEEEeCC----CceEEEE-CCeeEEEeceecCCCcccCCCCCchhhHHH
Q 019448 229 VQGWETDDVEEIALKLSQWPKASE-IRK-RTAVITQGA----DPVVVAQ-DGKLKKFPVIVLPKDKLVDTNGAGDAFVGG 301 (341)
Q Consensus 229 ~~~~~~~d~~~~~~~l~~~~~~~~-~~~-~~vvvt~G~----~G~~~~~-~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag 301 (341)
....+.++.+++++++ .+ .|+ +.||||.|. .|+++++ +++.++++.+.+ .+|++|+||+|+|+
T Consensus 151 ~~~~~~~~~~~aa~~L------~~~~g~~~~Vvvt~G~~~~~~g~~~~~~~~~~~~~~~~~v----~~dt~GaGD~fsaa 220 (282)
T 3h74_A 151 APYQVTPDLEVILPAL------QAQLKTGAHAVITDVQRADQIGCAWLDEAGHVQYCGARRL----PGHYNGTGDTLAAV 220 (282)
T ss_dssp CCCCSSCCHHHHHHHH------HTTSCTTCEECEEEEEETTEEEEEEECTTSCEEEEEEECC----SSCCTTHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH------HHHhCCCCEEEEEecCCCCceEEEEEeCCCeEEEEEecCC----CCCCcCHHHHHHHH
Confidence 7655567899999998 55 788 899999984 7888885 666777776543 38999999999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHhhhhhhhc
Q 019448 302 FLSQLVQEKPIEECVRAGCYTSHVIIQRS 330 (341)
Q Consensus 302 ~~~~l~~g~~~~~a~~~a~~~Aa~~v~~~ 330 (341)
|+++|++|+++++|+++|+++++.++++.
T Consensus 221 i~a~l~~g~~l~~A~~~A~~~~~~ai~~~ 249 (282)
T 3h74_A 221 IAGLLGRGYPLAPTLARANQWLNMAVAET 249 (282)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998753
No 58
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=99.78 E-value=1.6e-18 Score=153.69 Aligned_cols=163 Identities=13% Similarity=0.061 Sum_probs=121.7
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCch----hH---HHHHHHHHHhhcCCCcEEecCHHHHHHHhhh
Q 019448 157 KAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAP----FI---CEFFKDALEKVLPYMDYIFGNETEARTFSKV 229 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~----~~---~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~ 229 (341)
..|.+.++-.......+.+.++++.+++.+.++++||... .| .+...+.++++++++|+++||..|++.|++.
T Consensus 77 ~~~aik~G~l~s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~~adiitpN~~Ea~~L~g~ 156 (291)
T 3mbh_A 77 QFDAIYTGYLGSPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLITKADVITPNLTELFYLLDE 156 (291)
T ss_dssp CCSEEEECCCSSTTHHHHHHHHHHHHCCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCBHHHHHHHHTC
T ss_pred ccCEEEECCCCCHHHHHHHHHHHHHhcCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhccCCEEeCCHHHHHHHhCC
Confidence 5678887432111123556666666655678999999432 12 2445556788999999999999999999986
Q ss_pred cCC---CCCCHHHHHHHHhcCCccccCCccEEEEEeC-------CCceEEEEC--CeeEEEeceecCCCcccCCCCCchh
Q 019448 230 QGW---ETDDVEEIALKLSQWPKASEIRKRTAVITQG-------ADPVVVAQD--GKLKKFPVIVLPKDKLVDTNGAGDA 297 (341)
Q Consensus 230 ~~~---~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G-------~~G~~~~~~--~~~~~~~~~~~~~~~~vd~tGAGDa 297 (341)
... +.++.+++++++ .+.|++.||||.| ..|++++++ ++.++++.+.+ . +|++|+||+
T Consensus 157 ~~~~~~~~~~~~~aa~~L------~~~g~~~Vvvtgg~~~~~~g~~g~~~~~~~~~~~~~~~~~~~---~-~dt~GaGD~ 226 (291)
T 3mbh_A 157 PYKADSTDEELKEYLRLL------SDKGPQVVIITSVPVHDEPHKTSVYAYNRQGNRYWKVTCPYL---P-AHYPGTGDT 226 (291)
T ss_dssp CCCSCCCHHHHHHHHHHH------HHTSCSEEEEEEEEETTEEEEEEEEEEETTTTEEEEEEESCC---G-GGSTTHHHH
T ss_pred CCCCCCCHHHHHHHHHHH------HhhCCCEEEEEeccccCCCCcEEEEEEeCCCCeEEEEEeccc---C-CCCCChHHH
Confidence 432 234567788888 6678999999955 357788876 34666665432 4 899999999
Q ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHhhhhhhh
Q 019448 298 FVGGFLSQLVQEKPIEECVRAGCYTSHVIIQR 329 (341)
Q Consensus 298 f~ag~~~~l~~g~~~~~a~~~a~~~Aa~~v~~ 329 (341)
|+|+|+++|++|+++++|+++|+++++.++++
T Consensus 227 f~aai~a~l~~g~~l~~A~~~A~~~~~~ai~~ 258 (291)
T 3mbh_A 227 FTSVITGSLMQGDSLPMALDRATQFILQGIRA 258 (291)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988865
No 59
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=99.77 E-value=2.1e-18 Score=153.45 Aligned_cols=163 Identities=14% Similarity=0.080 Sum_probs=117.0
Q ss_pred ccceEEEEeccccccCHHHHHHHHHHHHhCC------CeEEEeCCc----hhHH-HHHHHHHHhhcCCCcEEecCHHHHH
Q 019448 156 EKAKYFYIAGFFLTVSPDSIQLVAEHAAANN------KVFMMNLSA----PFIC-EFFKDALEKVLPYMDYIFGNETEAR 224 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~------~~v~~d~~~----~~~~-~~~~~~~~~~l~~~dvl~~n~~E~~ 224 (341)
.++|++.++-.......+.+.++++.+++++ .++++||-- ..|. +...+.++++++++|+++||..|++
T Consensus 75 ~~~daV~tG~l~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~~~~~~~~~~~Ll~~adiitPN~~Ea~ 154 (300)
T 3zs7_A 75 SNYRYILTGYINNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYCKKEVLDAYRELVPLADIVTPNYFEAS 154 (300)
T ss_dssp GGCSEEEECCCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC---------CTHHHHHHHHGGGCSEECCCHHHHH
T ss_pred ccCCEEEECCCCCHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeecCHHHHHHHHHHhhhCCEecCCHHHHH
Confidence 4788876643221222355667777776554 689999921 1222 2345567779999999999999999
Q ss_pred HHhhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCc----e--EEE-EC------CeeEEEeceecCCCcccCC
Q 019448 225 TFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADP----V--VVA-QD------GKLKKFPVIVLPKDKLVDT 291 (341)
Q Consensus 225 ~l~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G----~--~~~-~~------~~~~~~~~~~~~~~~~vd~ 291 (341)
.|++....+.++..+++++| .+.|++.||||.|..| + .++ .. ++.++++.+.+ +. |+
T Consensus 155 ~L~g~~~~~~~~~~~aa~~L------~~~G~~~Vvvt~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v---~~-~~ 224 (300)
T 3zs7_A 155 LLSGVTVNDLSSAILAADWF------HNCGVAHVIIKSFREQENPTHLRFLYSVKEGSEAAVRRFSGVVPYH---EG-RY 224 (300)
T ss_dssp HHHSSCCCSHHHHHHHHHHH------HHHTCSEEEEEEEC---CCSEEEEEEEECCSTTSCCEEEEEEEECC---SS-CB
T ss_pred HHhCCCCCCHHHHHHHHHHH------HHhCCCEEEEecCcCCCCCceEEEEEeccccccCCCeEEEEEeccC---CC-CC
Confidence 99986544445677788888 6678999999999887 2 333 34 46677776554 33 89
Q ss_pred CCCchhhHHHHHHHHhcCCCHHHHHHHHHHHhhhhhhh
Q 019448 292 NGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQR 329 (341)
Q Consensus 292 tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~~Aa~~v~~ 329 (341)
+|+||+|+|+|+++| +|+++++|+++|+++...++++
T Consensus 225 ~GtGD~fsaal~a~l-~g~~~~~Av~~A~~~v~~~i~~ 261 (300)
T 3zs7_A 225 TGTGDVFAACLLAFS-HSHPMDVAIGKSMAVLQELIIA 261 (300)
T ss_dssp TTHHHHHHHHHHHHH-TTSCHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999997777753
No 60
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=99.65 E-value=9.5e-16 Score=134.45 Aligned_cols=165 Identities=15% Similarity=0.084 Sum_probs=110.5
Q ss_pred hhhccceEEEEeccccc-cCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC--CCcEEecCHHHHHHHhhh
Q 019448 153 ALVEKAKYFYIAGFFLT-VSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP--YMDYIFGNETEARTFSKV 229 (341)
Q Consensus 153 ~~l~~~~~v~i~~~~~~-~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~--~~dvl~~n~~E~~~l~~~ 229 (341)
+.+..++++++..-.+. ...+.+..+++.+++.++++++||..........+..+++++ +.|+|+||..|+..|++.
T Consensus 54 ~~~~~a~~lvi~~G~~~~~~~~~~~~~~~~a~~~~~pvVlDp~g~~~~~~~~~~~~~ll~~~~~~vitPN~~E~~~L~g~ 133 (272)
T 1ekq_A 54 DMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEIAHTVGV 133 (272)
T ss_dssp HHHHHSSEEEEECTTCCHHHHHHHHHHHHHHHHTTCCEEEECTTBTTBHHHHHHHHHHHHHSCCSEEEECHHHHHHHCC-
T ss_pred HHHHhCCEEEEECCCCCHHHHHHHHHHHHHHHhcCCeEEEeCCCcCcccchHHHHHHHHccCCCeEECCCHHHHHHHhCC
Confidence 45677899988432221 123567778888889999999999743211111233345665 899999999999999875
Q ss_pred c-C--------CCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHH
Q 019448 230 Q-G--------WETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG 300 (341)
Q Consensus 230 ~-~--------~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~a 300 (341)
. . .+.++..++++++. +.....||+| |+.+ +++++++.++++... ....|++|+||+|.|
T Consensus 134 ~~~~~~gvd~~~~~~~~~~aa~~l~------~~~~~vVv~~-G~~~-~i~~~~~~~~~~~~~---~~~~~ttGaGD~lag 202 (272)
T 1ekq_A 134 TDWLIKGVDAGEGGGDIIRLAQQAA------QKLNTVIAIT-GEVD-VIADTSHVYTLHNGH---KLLTKVTGAGCLLTS 202 (272)
T ss_dssp --------------HHHHHHHHHHH------HHHTSEEEEC-SSSE-EEECSSCEEEECCCC---GGGGGSTTHHHHHHH
T ss_pred CcccccCccCCCCHHHHHHHHHHHH------HHcCCEEEEE-CCCC-EEEeCCEEEEEcCCC---ccccCccCchHHHHH
Confidence 3 2 12334556777763 3323344555 8887 555666677776532 366799999999988
Q ss_pred HHHHHHhcCCCHHHHHHHHHH----Hhhhhhh
Q 019448 301 GFLSQLVQEKPIEECVRAGCY----TSHVIIQ 328 (341)
Q Consensus 301 g~~~~l~~g~~~~~a~~~a~~----~Aa~~v~ 328 (341)
++.+.+.+|.++.+|+++|+. ++..+.+
T Consensus 203 ~iaa~la~g~~~~~A~~~A~~~~~~A~~~a~~ 234 (272)
T 1ekq_A 203 VVGAFCAVEENPLFAAIAAISSYGVAAQLAAQ 234 (272)
T ss_dssp HHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 888888889999999999986 5554444
No 61
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=99.57 E-value=1.1e-14 Score=139.93 Aligned_cols=159 Identities=16% Similarity=0.200 Sum_probs=114.0
Q ss_pred cceEEEEeccccccCHHH---HHHHHHHHHhCCCeEEEeCCc------hhHHHHHHHHHH-hhcCCCcEEecCHHHHHHH
Q 019448 157 KAKYFYIAGFFLTVSPDS---IQLVAEHAAANNKVFMMNLSA------PFICEFFKDALE-KVLPYMDYIFGNETEARTF 226 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~---~~~~~~~a~~~~~~v~~d~~~------~~~~~~~~~~~~-~~l~~~dvl~~n~~E~~~l 226 (341)
..|.+.++.. +.+. +.++++..++.+.++++||-. ..+.+...+.++ ++++.+|++.||..|++.|
T Consensus 91 ~~daIkiG~l----s~~~i~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~~~~~~~~l~~~Ll~~a~iitPN~~Ea~~L 166 (550)
T 3rm5_A 91 KCNVIKTGML----TAAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLAGKDIVSLITEKVAPFADILTPNIPECYKL 166 (550)
T ss_dssp CCSEEEECSC----CHHHHHHHHHHHHHHGGGSCEEEECCCC---------CTTHHHHHHHHTGGGCSEECCBHHHHHHH
T ss_pred CCCEEEECCC----CHHHHHHHHHHHHHhcccCCCEEEecceecCCCCcCCCHHHHHHHHHHhhCcceEEecCHHHHHHH
Confidence 6788888643 5554 444555554458899999942 112222334455 7889999999999999999
Q ss_pred hhhc--CCCCCCHHHHHHHHhcCCccccCCc-cEEEEEeCCCc--------e--EEE--ECCeeEEEeceecCCCcccCC
Q 019448 227 SKVQ--GWETDDVEEIALKLSQWPKASEIRK-RTAVITQGADP--------V--VVA--QDGKLKKFPVIVLPKDKLVDT 291 (341)
Q Consensus 227 ~~~~--~~~~~d~~~~~~~l~~~~~~~~~~~-~~vvvt~G~~G--------~--~~~--~~~~~~~~~~~~~~~~~~vd~ 291 (341)
++.. ..+.++..++++++ .+.+. +.||||.|..+ + +++ .+++.++++.+.+ ..+|+
T Consensus 167 ~g~~~~i~~~~d~~~aa~~L------~~~g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~~~~~~~~~~~v---~~~~t 237 (550)
T 3rm5_A 167 LGEERKVNGLQDIFQIAKDL------AKITKCSNILVKGGHIPWNDEKEKYITDVLFLGAEQKFIIFKGNFV---NTTHT 237 (550)
T ss_dssp HSCCCCCCSSHHHHHHHHHH------HHHHCCSCEEEEECC-------CCEEEEEEEETTTTEEEEEEEECC---CCSCC
T ss_pred hCCCCCCCCHHHHHHHHHHH------HHhCCCCEEEEeCCCCCcccCCCCeEEEEEEEcCCCeEEEEEecCc---CCCCC
Confidence 9853 23345677888888 55555 78999998753 3 455 3566677776544 67899
Q ss_pred CCCchhhHHHHHHHHhcCCCHHHHHHHHHHHhhhhhh
Q 019448 292 NGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQ 328 (341)
Q Consensus 292 tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~~Aa~~v~ 328 (341)
+|+||+|+|++++.|++|+++++|+++|+..-..+++
T Consensus 238 ~GtGD~fsaaiaa~La~G~~l~eAv~~A~~~v~~ai~ 274 (550)
T 3rm5_A 238 HGTGCTLASAIASNLARGYSLPQSVYGGIEYVQNAVA 274 (550)
T ss_dssp BTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred cChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999976555554
No 62
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=99.27 E-value=6.2e-11 Score=103.18 Aligned_cols=159 Identities=15% Similarity=0.081 Sum_probs=106.5
Q ss_pred hhhhhccceEEEEeccccccCHH---HHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC-CCcEEecCHHHHHHH
Q 019448 151 NWALVEKAKYFYIAGFFLTVSPD---SIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP-YMDYIFGNETEARTF 226 (341)
Q Consensus 151 ~~~~l~~~~~v~i~~~~~~~~~~---~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~-~~dvl~~n~~E~~~l 226 (341)
..+.++.+|++++..-.+ +.+ .+..+++.+++.++|+++||..........+...++++ ..+++.||..|+..|
T Consensus 50 ~~~~~~~~dalvi~~G~~--~~~~~~~~~~~~~~a~~~~~pvVlDpv~~~~~~~~~~~~~~ll~~~~~vITPN~~E~~~L 127 (265)
T 1v8a_A 50 LEEMIRLADAVVINIGTL--DSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISAL 127 (265)
T ss_dssp HHHHHHHCSEEEEECTTC--CHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEHHHHHHH
T ss_pred HHHHHHHCCEEEEEECCC--CHHHHHHHHHHHHHHHHcCCcEEEcCccccccccCHHHHHHHHHhCCcEEcCCHHHHHHH
Confidence 345678899999964322 333 55667778888999999999752211111222233332 289999999999999
Q ss_pred hhhcC----CC----C-CCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchh
Q 019448 227 SKVQG----WE----T-DDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDA 297 (341)
Q Consensus 227 ~~~~~----~~----~-~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDa 297 (341)
++... .+ . ++..++++.+. +.+...||+| |..+. +++++..+.++... ....+++|+||+
T Consensus 128 ~g~~~~~~gvd~~~~~~~~~~~aa~~la------~~~~~~Vvlk-G~~d~-i~~~~~~~~~~~g~---~~~~~~~GtGD~ 196 (265)
T 1v8a_A 128 LGEEGKTRGVDSLEYGEEEAKKLTMNAA------REFNTTVAVT-GAVDY-VSDGRRTFAVYNGH---ELLGRVTGTGCM 196 (265)
T ss_dssp HHHHC----------CHHHHHHHHHHHH------HHTTSEEEEE-SSSEE-EECSSCEEEECCCC---GGGGGSTTHHHH
T ss_pred hCCcccccCcCcccccHHHHHHHHHHHH------HHhCcEEEEc-CCCcE-EEcCCEEEEEcCCC---cCcCCccChhHH
Confidence 88642 11 1 34566777773 3333456666 87664 45666666666432 245599999999
Q ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHh
Q 019448 298 FVGGFLSQLVQEKPIEECVRAGCYTS 323 (341)
Q Consensus 298 f~ag~~~~l~~g~~~~~a~~~a~~~A 323 (341)
|.|.+.+.+.+|.+ .+|+..|...-
T Consensus 197 Lsg~iaa~lA~g~~-~~Aa~~a~~~~ 221 (265)
T 1v8a_A 197 VAALTGAFVAVTEP-LKATTSALVTF 221 (265)
T ss_dssp HHHHHHHHHTTSCH-HHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCC-HHHHHHHHHHH
Confidence 99999999999999 88888776543
No 63
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=98.99 E-value=2e-09 Score=95.56 Aligned_cols=156 Identities=13% Similarity=0.102 Sum_probs=94.0
Q ss_pred hhhccceEEEEeccccccCHHHHHHHHHHHHh--CCCeEEEeCCchhHHHHHHHHHHhh-c-CCCcEEecCHHHHHHHhh
Q 019448 153 ALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAA--NNKVFMMNLSAPFICEFFKDALEKV-L-PYMDYIFGNETEARTFSK 228 (341)
Q Consensus 153 ~~l~~~~~v~i~~~~~~~~~~~~~~~~~~a~~--~~~~v~~d~~~~~~~~~~~~~~~~~-l-~~~dvl~~n~~E~~~l~~ 228 (341)
..++..|++.++. .+..+.+....+.+..+. .+.++++|+.......... .+ + +..++|+||..|+..|++
T Consensus 121 ~~~~~~dav~IG~-Gl~~~~~~~~~v~~~l~~~~~~~pvVlDa~g~~ll~~~~----~l~L~~~~~viTPN~~E~~~L~g 195 (311)
T 3bgk_A 121 EQITAADVVLMGP-GLAEDDLAQTTFDVVWQAIEPKQTLIIDGSAINLLAKRK----PAIWPTKQIILTPHQKEWERLSG 195 (311)
T ss_dssp HHHHHCSEEEECT-TCCSSHHHHHHHHHHHHHCCTTSEEEEETHHHHHHHHCC-----CCCSCSCEEEECCSCC-CTTTC
T ss_pred HHhccCCEEEEcC-CCCCCHHHHHHHHHHHHHcCCCCeEEEeCChhhhhccCh----hhcCCCCCEEECCcHHHHHHHhC
Confidence 4456789999963 122234333333333333 3789999996543211100 12 3 468899999999999987
Q ss_pred hcCCCC-CCH-HHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHH
Q 019448 229 VQGWET-DDV-EEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQL 306 (341)
Q Consensus 229 ~~~~~~-~d~-~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l 306 (341)
....+. ++. .++++++ .+ + .+|+..| .+.++++++.. ++... .....+++|+||++ +|+++++
T Consensus 196 ~~~~~~~~d~~~~aa~~l------~~-g--~~VvlkG-~~~~i~~~~~~-~~~~~---~~~~~~t~GtGD~L-ag~iaa~ 260 (311)
T 3bgk_A 196 LTIPEQIEAATQTALAHF------PK-E--TILVAKS-HQTKIYQGQKI-GHIQV---GGPYQATGGMGDTL-AGMIAGF 260 (311)
T ss_dssp CCSTTCCHHHHHHHHTTS------CT-T--CEEEECS-SSCEEEETTEE-EEECC---CCGGGCSTTHHHHH-HHHHHHH
T ss_pred CCCCcchhhHHHHHHHHH------hc-C--CEEEEeC-CCeEEEECCEE-EEECC---CCCCCCCCcHHHHH-HHHHHHH
Confidence 543222 133 4455554 33 3 3455556 56667764444 44433 33678999999997 5555555
Q ss_pred -hc-CCCHHHHHHHHHHHhhhhhh
Q 019448 307 -VQ-EKPIEECVRAGCYTSHVIIQ 328 (341)
Q Consensus 307 -~~-g~~~~~a~~~a~~~Aa~~v~ 328 (341)
.+ |.++.+|+.+|+.+.+..-+
T Consensus 261 lA~~g~~~~eA~~~A~~~~~~ag~ 284 (311)
T 3bgk_A 261 VAQFHTDRFEVAAAAVFLHSYIAD 284 (311)
T ss_dssp HHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHccCCCHHHHHHHHHHHHHHHHH
Confidence 68 99999999999877666443
No 64
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=98.99 E-value=1.5e-09 Score=96.34 Aligned_cols=154 Identities=18% Similarity=0.153 Sum_probs=92.7
Q ss_pred hhhccceEEEEeccccccCHHHHHHHHHHHHh--CCCeEEEeCCchhHHHHHHHHHHhhc--CCCcEEecCHHHHHHHhh
Q 019448 153 ALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAA--NNKVFMMNLSAPFICEFFKDALEKVL--PYMDYIFGNETEARTFSK 228 (341)
Q Consensus 153 ~~l~~~~~v~i~~~~~~~~~~~~~~~~~~a~~--~~~~v~~d~~~~~~~~~~~~~~~~~l--~~~dvl~~n~~E~~~l~~ 228 (341)
..++..|++.++. .+..+.+....+.+..+. .+.++++|+.......... +++ +..++|.||..|+..|++
T Consensus 107 ~~~~~~dav~IG~-Gl~~~~~~~~~v~~~l~~~~~~~pvVlDa~g~~ll~~~~----~~l~~~~~~viTPN~~E~~~L~g 181 (310)
T 2r3b_A 107 NVVEQADVILIGP-GLGLDATAQQILKMVLAQHQKQQWLIIDGSAITLFSQGN----FSLTYPEKVVFTPHQMEWQRLSH 181 (310)
T ss_dssp HHHHHCSEEEECT-TCCSSHHHHHHHHHHHHHCCTTCEEEEETHHHHHHHHTT----CCCSSGGGEEEECCHHHHHHHHC
T ss_pred HHhccCCEEEEeC-CCCCCHHHHHHHHHHHHhcCCCCcEEEcCCcchhcccch----hhhcCCCCEEEcCCHHHHHHHhC
Confidence 3456788999863 122233333333333333 4789999996543211100 223 357899999999999987
Q ss_pred hcCCCCC-CH-HHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHH
Q 019448 229 VQGWETD-DV-EEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQL 306 (341)
Q Consensus 229 ~~~~~~~-d~-~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l 306 (341)
....+.+ +. .++++++ ++ +|+..| .+.++++++..+ +... .....+++|+||++.|.+.+.+
T Consensus 182 ~~~~~~~~~~a~~aA~~l---------g~--~VvlKG-~~~vi~~~~~~~-~~~~---g~~~~~t~GtGD~Lag~Iaa~l 245 (310)
T 2r3b_A 182 LPIEQQTLANNQRQQAKL---------GS--TIVLKS-HRTTIFHAGEPF-QNTG---GNPGMATGGTGDTLAGIIAGFL 245 (310)
T ss_dssp CCGGGCCHHHHHHHHHHH---------TS--EEEECS-TTCEEECSSSCE-ECCC---CCGGGCSTTHHHHHHHHHHHHH
T ss_pred CCCCcccchHHHHHHHHh---------Cc--EEEEeC-CceEEEECCEEE-EECC---CCCCCCCCChHHHHHHHHHHHH
Confidence 5322222 33 5556654 32 455556 456666543343 3332 2366789999999744444444
Q ss_pred hcCCCHHHHHHHHHHHhhhhh
Q 019448 307 VQEKPIEECVRAGCYTSHVII 327 (341)
Q Consensus 307 ~~g~~~~~a~~~a~~~Aa~~v 327 (341)
.+|.++.+|+..|+.+.+..-
T Consensus 246 A~g~~~~eA~~~A~~~~~~ag 266 (310)
T 2r3b_A 246 AQFKPTIETIAGAVYLHSLIG 266 (310)
T ss_dssp HHSCSSHHHHHHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHHHHHHHH
Confidence 699999999999987666643
No 65
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=98.90 E-value=3.9e-08 Score=85.22 Aligned_cols=161 Identities=14% Similarity=0.087 Sum_probs=104.4
Q ss_pred hhhhhccceEEEEecccccc-CHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhc-CCCcEEecCHHHHHHHhh
Q 019448 151 NWALVEKAKYFYIAGFFLTV-SPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVL-PYMDYIFGNETEARTFSK 228 (341)
Q Consensus 151 ~~~~l~~~~~v~i~~~~~~~-~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l-~~~dvl~~n~~E~~~l~~ 228 (341)
..+.++.++.+++..-.+.. ..+.+...++.+++.++|+++||-.........+..++++ .+.++|.+|..|+..|++
T Consensus 52 ~~e~~~~a~alvIn~G~l~~~~~~~~~~a~~~a~~~~~PvVlDPVg~gas~~r~~~~~~Ll~~~~~VItpN~~E~~~L~g 131 (273)
T 3dzv_A 52 FPQMFQQTSALVLNLGHLSQEREQSLLAASDYARQVNKLTVVDLVGYGASDIRNEVGEKLVHNQPTVVKGNLSEMRTFCQ 131 (273)
T ss_dssp HHHHHTTCSEEEEECCSCCHHHHHHHHHHHHHHHHTTCCEEEECTTTTSCHHHHHHHHHHHHTCCSEEEEEHHHHHHHTT
T ss_pred HHHHHHHCCeEEEecCCCChHHHHHHHHHHHHHHHcCCcEEEchhhcCCcccCHHHHHHHHhcCCcEECCCHHHHHHHhC
Confidence 34567889999997533211 1245667777788899999999954322211122223333 368999999999999998
Q ss_pred hcC----CCC-------C---CHHHHHHHHhcCCccccCCc-cEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCC
Q 019448 229 VQG----WET-------D---DVEEIALKLSQWPKASEIRK-RTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNG 293 (341)
Q Consensus 229 ~~~----~~~-------~---d~~~~~~~l~~~~~~~~~~~-~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tG 293 (341)
... .+. + +..++++.+. +... ..|++| |..- ++++++..+.++.- +....+++|
T Consensus 132 ~~~~~~GVds~~~~~~~~~~~d~~~aa~~la------~~~~~~~Vvlk-G~~D-~i~dg~~~~~~~~G---~~~~~~v~G 200 (273)
T 3dzv_A 132 LVSHGRGVDGSPLDQSEEAIEELIQALRQQT------QKFPQTVFLAT-GIQD-VLVSQEQVIVLQNG---VPELDCFTG 200 (273)
T ss_dssp CCCC-------CGGGSHHHHHHHHHHHHHHH------HHSTTCEEEEE-SSSE-EEECSSCEEEECCC---CGGGGSSTT
T ss_pred CcccccccccccccchhhhhHHHHHHHHHHH------HHhCCeEEEEE-CCee-EEEcCCEEEEeCCC---CcccCCcCC
Confidence 542 121 1 3345666663 2223 566777 4432 45555566665432 124456799
Q ss_pred CchhhHHHHHHHHhcCCCHHHHHHHHHHH
Q 019448 294 AGDAFVGGFLSQLVQEKPIEECVRAGCYT 322 (341)
Q Consensus 294 AGDaf~ag~~~~l~~g~~~~~a~~~a~~~ 322 (341)
.||++.|.+.+.+.+|.++.+|+..|...
T Consensus 201 tGc~Ls~~Iaa~lA~g~~~~~Aa~~A~~~ 229 (273)
T 3dzv_A 201 TGDLVGALVAALLGEGNAPMTAAVAAVSY 229 (273)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 99999999999999999999998888754
No 66
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=98.90 E-value=5.8e-07 Score=83.05 Aligned_cols=214 Identities=11% Similarity=0.016 Sum_probs=123.5
Q ss_pred eEEEEcCceeeeEeecChhHHHHh----C-------------------------------CCCCceEecccccccHHHHH
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKY----D-------------------------------IKLNNAILAEEKHLPLYDEM 50 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~----~-------------------------------~~~~~~~~~~~~~~~~~~~~ 50 (341)
.|++-=++++|.+.+++++.++++ + +..++.++.+. .+...-..
T Consensus 29 ~i~~ayN~NVDai~~~~~~~i~~li~~~~~~~v~~~~~~~p~~I~s~~dl~~~~~~~~~~G~aaE~~v~~~-~~~~~~~~ 107 (474)
T 3drw_A 29 SIYTAYNANIAAIVKLNQETIQNLINAFDPDEVKRRIEEYPREINEPIDFVARLVHTLKLGKPAAVPLVNE-KMNEWFDK 107 (474)
T ss_dssp EEEEESCCEEEEEEECCHHHHHHHHHTSCHHHHHHHHHHCCSSBSSHHHHHHHHHHHHHHTCCEEEEECCT-THHHHHHH
T ss_pred ceEEEecccEEEEEEcCHHHHHHHHHhcChHHhhhhhhcCCccCCCHHHHHHHHHHHHhCCCceEEecccH-hHHHHHHH
Confidence 688888999999999998655533 1 22345556554 22211111
Q ss_pred hccCCceEecCchHHHHHHHHHHHhcCCC-cEEEEeeeecCchhHHHHHHHHhcCcceeee--------e----cC-CCC
Q 019448 51 ASKYNVEYIAGGATQNSIRVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYY--------E----DE-SAS 116 (341)
Q Consensus 51 ~~~~~~~~~~GG~a~n~a~~l~~l~~lg~-~v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~--------~----~~-~~~ 116 (341)
.......+.||.|.-+|..++. +|. +|.+.++... +...+.| ..+|-.... . .. +.+
T Consensus 108 -~~~~~~~~~GGnA~imAn~La~---lg~~~Vi~~~p~~s----k~~~~ll-~~~i~~p~~e~g~l~l~~~~ea~~~~~~ 178 (474)
T 3drw_A 108 -TFRYEEERLGGQAGIIANTLAG---LKIRKVIAYTPFLP----KRLAELF-KKGVLYPVVENGELQFKPIQEAYREGDP 178 (474)
T ss_dssp -HCCCSEEEEESHHHHHHHHHHH---TTCSEEEECCSCCC----HHHHTTS-CTTEEEEEESSSSEEEEEGGGCCCTTCC
T ss_pred -hcccceEecCChHHHHHHHHHH---cCCCcEEEecCcCC----HHHHHhc-CCcceeecccCCceeecCchhhhccCCC
Confidence 1233467899999999999887 458 5777777543 3445555 233322211 0 00 111
Q ss_pred ceeEEEEE-eCCc---------------cceeecccccc-cCC-cccCCCcchhhhh-ccceEEEEeccccccC------
Q 019448 117 TGTCAVCV-VGGE---------------RSLVANLSAAN-CYK-SEHLKKPENWALV-EKAKYFYIAGFFLTVS------ 171 (341)
Q Consensus 117 t~~~~~~~-~~g~---------------~~~~~~~~~~~-~~~-~~~~~~~~~~~~l-~~~~~v~i~~~~~~~~------ 171 (341)
...-+++- ..|+ |-++.....+. .+. .+.+. +....+ +.+|+++++|++....
T Consensus 179 ~~iH~I~Ey~~G~~~~~~~~~~~aPraNRfI~s~D~~N~~~l~~~e~f~--~~l~e~~~~~d~~vLSGlq~m~~~y~dg~ 256 (474)
T 3drw_A 179 LKINRIFEFRKGLKFKLGDETIEIPNSGRFIVSARFESISRIETREDIK--PFLGEIGKEVDGAIFSGYQGLRTKYSDGK 256 (474)
T ss_dssp CCEEEEEEECTTCEEESSSCEEECCSCEEEEEEECCSGGGCCSCCTTTG--GGHHHHHHHCSEEEECCGGGCCSBCTTSC
T ss_pred CCcEEEEEcCCCCeeecCCceEEccCCCeEEEEcCCCCHHhccccHHHH--HHHHHhhcCCCEEEEeccccccccccccc
Confidence 22222222 2333 22333322222 222 22222 122333 3699999999985332
Q ss_pred --HH---HHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcC
Q 019448 172 --PD---SIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQG 231 (341)
Q Consensus 172 --~~---~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~ 231 (341)
.+ .+.+.++..+..++++-+...+..-.+.....+..+++++|.+-+|++|+..+.+..+
T Consensus 257 ~~~~~l~~~~e~i~~l~~~~~~iH~E~As~~~~~l~~~i~~~i~p~vDSlGmNEqELa~l~~~lg 321 (474)
T 3drw_A 257 DANYYLRRAKEDIIEFKEKDVKIHVEFASVQDRKLRKKIITNILPFVDSVGIDEAEIAQILSVLG 321 (474)
T ss_dssp BHHHHHHHHHHHHHHHHHTTCEEEEECCCCSCHHHHHHHHHHTGGGSSEEEEEHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHhcCCCCeEEEEeCccccHHHHHHHHHHhcccccccccCHHHHHHHHHHhc
Confidence 12 2335555556788999999987654444555567899999999999999999987643
No 67
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=98.78 E-value=3.6e-08 Score=92.92 Aligned_cols=157 Identities=15% Similarity=0.097 Sum_probs=100.5
Q ss_pred hhhccceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCC
Q 019448 153 ALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGW 232 (341)
Q Consensus 153 ~~l~~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~ 232 (341)
+.+..+|+++++.- +..+......+.+.+++.++++++|+....... .+.+ +..+..+++.||..|+..|++....
T Consensus 316 ~~~~~~davviGpG-lg~~~~~~~~~~~~l~~~~~pvVlDadgl~~l~--~~ll-~~~~~~~vlTPN~~E~~~L~g~~~~ 391 (502)
T 3rss_A 316 ELSKDVDVVAIGPG-LGNNEHVREFVNEFLKTLEKPAVIDADAINVLD--TSVL-KERKSPAVLTPHPGEMARLVKKTVG 391 (502)
T ss_dssp HHHTTCSEEEECTT-CCCSHHHHHHHHHHHHHCCSCEEECHHHHHTCC--HHHH-HHCSSCEEECCCHHHHHHHHTCCHH
T ss_pred HHhccCCEEEEeCC-CCCCHHHHHHHHHHHHhcCCCEEEeCcccchhc--HHHH-hccCCCEEEeCCHHHHHHHhCCCcc
Confidence 45678999999752 222233333333355677899999996533211 2222 2345678999999999999874321
Q ss_pred C-CCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCC
Q 019448 233 E-TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKP 311 (341)
Q Consensus 233 ~-~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~ 311 (341)
+ .++ .++++++.+ .. ..+|+..|. +.++++++..+..+ . .....+++|+||+++|.+.+.+.+|.+
T Consensus 392 ~~~~d-~~aa~~la~------~~-~~~VvlKG~-~~vi~~~~~~~~~~-~---g~~~~at~GsGD~Lag~iaa~lA~g~~ 458 (502)
T 3rss_A 392 DVKYN-YELAEEFAK------EN-DCVLVLKSA-TTIVTDGEKTLFNI-T---GNTGLSKGGSGDVLTGMIAGFIAQGLS 458 (502)
T ss_dssp HHTTC-HHHHHHHHH------HH-TSEEEECSS-SEEEECSSCEEEEC-C---CCGGGSSTTHHHHHHHHHHHHHHTTCC
T ss_pred chHHH-HHHHHHHHH------Hc-CCEEEEeCC-CeEEEcCCEEEEEC-C---CCCccccCCchHHHHHHHHHHHhCCCC
Confidence 1 244 667777632 22 235566565 45566555444333 2 235678999999988888888889999
Q ss_pred HHHHHHHHHHHhhhh
Q 019448 312 IEECVRAGCYTSHVI 326 (341)
Q Consensus 312 ~~~a~~~a~~~Aa~~ 326 (341)
+.+|+.+|+..-+.+
T Consensus 459 ~~~Aa~~A~~~hg~A 473 (502)
T 3rss_A 459 PLEASTVSVYLHGFA 473 (502)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999998766554
No 68
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=98.68 E-value=8.5e-08 Score=83.56 Aligned_cols=155 Identities=15% Similarity=0.141 Sum_probs=99.2
Q ss_pred hccceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhc---CCCcEEecCHHHHHHHhhhcC
Q 019448 155 VEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVL---PYMDYIFGNETEARTFSKVQG 231 (341)
Q Consensus 155 l~~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l---~~~dvl~~n~~E~~~l~~~~~ 231 (341)
++.+|++++.+ .+.. .+...++++.+.+.+.++++|...... +.+ ...++|.||..|+..|++...
T Consensus 96 l~~~davviGP-Glg~-~~~~~~~~~~~l~~~~p~VlDAdal~~---------~~l~~~~~~~vlTPN~~E~~~L~g~~~ 164 (279)
T 3rpz_A 96 EETYRAIAIGP-GLPQ-TESVQQAVDHVLTADCPVILDAGALAK---------RTYPKREGPVILTPHPGEFFRMTGVPV 164 (279)
T ss_dssp SSCCSEEEECT-TCCC-CHHHHHHHHHHTTSSSCEEECGGGCCS---------CCCCCCSSCEEECCCHHHHHHHHCCCH
T ss_pred ccCCCEEEECC-CCCC-CHHHHHHHHHHHhhCCCEEEECCccch---------hhhhhccCCEEEecCHHHHHHHhCCCc
Confidence 56789999964 2222 234566677777778899999976431 222 346899999999999987432
Q ss_pred CC-CCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCC
Q 019448 232 WE-TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK 310 (341)
Q Consensus 232 ~~-~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~ 310 (341)
.+ .++..++++++.+ ..+ . +|+-.|. +.+++++++.+++... ......++|+||++.+.+.+.+.+|.
T Consensus 165 ~~~~~d~~~aa~~la~-----~~~-~-~VvlKG~-~~vi~~~~g~~~~~~~---g~~~~at~GtGD~Lag~iaa~lA~g~ 233 (279)
T 3rpz_A 165 NELQKKRAEYAKEWAA-----QLQ-T-VIVLKGN-QTVIAFPDGDCWLNPT---GNGALAKGGTGDTLTGMILGMLCCHE 233 (279)
T ss_dssp HHHTTSHHHHHHHHHH-----HHT-S-EEEECST-TCEEECTTSCEEECCC---CCGGGCSTTHHHHHHHHHHHHHHHCS
T ss_pred cchHHHHHHHHHHHHH-----HcC-e-EEEEeCC-CcEEECCCceEEEeCC---CCCCCCCCChHHHHHHHHHHHHHCCC
Confidence 11 2466677777732 122 2 4454465 4455655544444332 22567899999987666666667999
Q ss_pred CHHHHHHHHHH----Hhhhhhhhcc
Q 019448 311 PIEECVRAGCY----TSHVIIQRSG 331 (341)
Q Consensus 311 ~~~~a~~~a~~----~Aa~~v~~~g 331 (341)
++.+|+..|.. ++-...++.|
T Consensus 234 ~~~~A~~~a~~lh~~Ag~~a~~~~g 258 (279)
T 3rpz_A 234 DPKHAVLNAVYLHGACAELWTDEHS 258 (279)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999874 3444444444
No 69
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=98.41 E-value=2.3e-05 Score=72.48 Aligned_cols=209 Identities=11% Similarity=-0.029 Sum_probs=116.0
Q ss_pred ceEEEEcCceeeeEeecChhHHH----HhCCC-------------------------------CCceEecccccccHHHH
Q 019448 5 GILLGMGNPLLDISSVVDDDFLN----KYDIK-------------------------------LNNAILAEEKHLPLYDE 49 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~----~~~~~-------------------------------~~~~~~~~~~~~~~~~~ 49 (341)
.+|++-=++++|.+...+++.++ +++.. .++.++.+.+-+.....
T Consensus 31 ~~i~~Gyn~nvD~iv~~~~~~i~~Ll~~~~~~~~~~~~~~~~~~I~s~~dl~~~~~~~~~~G~aaE~~v~~~~~f~~l~~ 110 (467)
T 1gc5_A 31 KGVLLAYNTNIDAIKYLDADDLEKRVTEKGKEKVFEIIENPPEKISSIEELLGGILRSIKLGKAMEWFVESEEVRRYLRE 110 (467)
T ss_dssp CCEEEESCCEEEEEEECCHHHHHHHHHHHCHHHHHHHHHSCCSSBCSHHHHHHHHHHHHHSCCCEEEEBCCHHHHHHHHH
T ss_pred CcEEEEecccEEEEEeCchHHHHHHHHHcCCcccccccccCccccCCHHHHHHHHHHHHhCCCceEEeccCHHHHHHHHH
Confidence 37777788999999999874433 33332 23344444322222222
Q ss_pred HhccCCceEecCchHHHHHHHHHHHhcCCCcEEE--EeeeecCchhHHHHHHHHhcCcceeeeec------------CCC
Q 019448 50 MASKYNVEYIAGGATQNSIRVAQWMLQIPGATSY--IGCIGKDKFGEEMKKNSKLAGVNVHYYED------------ESA 115 (341)
Q Consensus 50 ~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~--i~~vG~D~~g~~i~~~l~~~gi~~~~~~~------------~~~ 115 (341)
..-...+.||.|.-+|..++. +|.++.+ ++.+| +...+.|.+.+|....+.. .+.
T Consensus 111 ---~~~~~~~mGGnAgimAn~la~---lg~~~vl~~~~~~s-----~~~~~l~~~~~i~~p~~~~g~l~~~~~~ea~~~~ 179 (467)
T 1gc5_A 111 ---WGWDELRIGGQAGIMANLLGG---VYRIPTIVHVPQNP-----KLQAELFVDGPIYVPVFEGNKLKLVHPKDAIAEE 179 (467)
T ss_dssp ---HCCSEEEEESHHHHHHHHHHH---TSCCCEEECCSCCC-----HHHHTTSCSSSEEEEEECSSCEEEECGGGSCCSC
T ss_pred ---hcCcccccCccHHHHHHHHHh---cCCCEEEEcCCCCC-----HHHHHhcCCCCeeeeeccCCceecccchhhccCC
Confidence 111223999999999988886 4578776 55544 4556666534443321110 012
Q ss_pred CceeEEEEE-eCCccc-----------eeecccccccCCcccCCCcchhhhh----ccceEEEEeccccccC-------H
Q 019448 116 STGTCAVCV-VGGERS-----------LVANLSAANCYKSEHLKKPENWALV----EKAKYFYIAGFFLTVS-------P 172 (341)
Q Consensus 116 ~t~~~~~~~-~~g~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~v~i~~~~~~~~-------~ 172 (341)
+...-+++- ..|++. ++..+..+..+. -.+++...+ ..+|+++++|++.... .
T Consensus 180 ~~~iH~I~Ey~~G~~~~~~~aPraNRfI~s~D~~N~~l~----~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~y~~g~~~ 255 (467)
T 1gc5_A 180 EELIHYIYEFPRGFQVFDVQAPRENRFIANADDYNARVY----MRREFREGFEEITRNVELAIISGLQVLKEYYPDGTTY 255 (467)
T ss_dssp CCCEEEEEEECSSCEETTEECSSCEEEEEECCSSTTTTC----CCHHHHHSHHHHHTTCSEEEECCGGGCCSBCTTSCBH
T ss_pred CCcceEEEEcCCCCeecceeccCCceEEEecCCCCcccc----ccHHHHHHHHhhccCCCEEEEechhcccCccCCchhH
Confidence 222222222 244432 222211111111 012222334 4599999999984322 1
Q ss_pred -HHHH---HHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhh
Q 019448 173 -DSIQ---LVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKV 229 (341)
Q Consensus 173 -~~~~---~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~ 229 (341)
+.+. +.++.....++++.+.+.+..-.......+ .+++++|.+-+|++|+..+...
T Consensus 256 ~~~l~~~~~~l~~l~~~~~~iH~E~As~~~~~l~~~i~-~ilp~vDSlGmNEqELa~l~~~ 315 (467)
T 1gc5_A 256 KDVLDRVESHLNILNRYNVKSHFEFAYTANRRVREALV-ELLPKFTSVGLNEVELASIMEI 315 (467)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEECCCCCCHHHHHHHH-HHGGGCSEEEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCCeEEEEECCcccHHHHHHHH-hhccccccCccCHHHHHHHHHH
Confidence 2222 233332567889999998765444455656 8999999999999999866544
No 70
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=98.41 E-value=8.7e-06 Score=75.17 Aligned_cols=209 Identities=11% Similarity=-0.044 Sum_probs=113.7
Q ss_pred ceEEEEcCceeeeEeecChhHHH----HhCCC-------------------------------CCceEecccccccHHHH
Q 019448 5 GILLGMGNPLLDISSVVDDDFLN----KYDIK-------------------------------LNNAILAEEKHLPLYDE 49 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~----~~~~~-------------------------------~~~~~~~~~~~~~~~~~ 49 (341)
.+|++==++++|.+...+++.++ +++.. .++.++.+.+-+.....
T Consensus 26 ~~i~~gyn~nvD~iv~~~~~~i~~Ll~~~~~~~~~~~~~~~~~~I~s~~dl~~~~~~~~~~G~aaE~~v~~~~~f~~l~~ 105 (457)
T 1l2l_A 26 RGVLLAYNTNIDAIKYLKREDLEKRIEKVGKEEVLRYSEELPKEIETIPQLLGSILWSIKRGKAAELLVVSREVREYMRK 105 (457)
T ss_dssp CCEEEEECCEEEEECBCCHHHHHHHHHHHCHHHHHHHHHSCCSSBCSHHHHHHHHHHHHHHTCCEEEEBCCHHHHHHHHH
T ss_pred CcEEEEecccEEEEEECchHHHHHHHHHhCCcccccccccCCcccCCHHHHHHHHHHHHhCCCceEEeccCHHHHHHHHH
Confidence 36777778999999999874433 44332 13334443322212222
Q ss_pred HhccCCceEecCchHHHHHHHHHHHhcCCCcEEE--EeeeecCchhHHHHHHHHhcCcceeeeec------------CCC
Q 019448 50 MASKYNVEYIAGGATQNSIRVAQWMLQIPGATSY--IGCIGKDKFGEEMKKNSKLAGVNVHYYED------------ESA 115 (341)
Q Consensus 50 ~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~--i~~vG~D~~g~~i~~~l~~~gi~~~~~~~------------~~~ 115 (341)
. .-...+.||.|.-+|..++. +|.++.+ ++.+| +..++.|.+.+|....+.. .+.
T Consensus 106 -~--~~~~~~mGGnA~imAn~la~---lg~~~vl~~~~~~s-----~~~~~l~~~~~i~~p~~~~g~l~l~~~~e~~~~~ 174 (457)
T 1l2l_A 106 -W--GWDELRMGGQVGIMANLLGG---VYGIPVIAHVPQLS-----ELQASLFLDGPIYVPTFERGELRLIHPREFRKGE 174 (457)
T ss_dssp -H--CCSEEEEESHHHHHHHHHTT---TSCCCEEECCSSCC-----HHHHHTSCSSSEEEEC------CEECGGGC----
T ss_pred -h--cCCccccCchHHHHHHHHHH---cCCCEEEEcCCCCC-----HHHHHhcCCCCeEeeeccCCceeccCchhhccCC
Confidence 1 11233999998888888775 5688776 55544 4556666533343221100 001
Q ss_pred CceeEEEEE-eCCcc-----------ceeecccccccCCcccCCCcchhhhh----ccceEEEEeccccccC---HH---
Q 019448 116 STGTCAVCV-VGGER-----------SLVANLSAANCYKSEHLKKPENWALV----EKAKYFYIAGFFLTVS---PD--- 173 (341)
Q Consensus 116 ~t~~~~~~~-~~g~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~v~i~~~~~~~~---~~--- 173 (341)
+...-+++- ..|++ -++..+..+..+.. .+++...+ ..+|+++++|++.... +.
T Consensus 175 ~~~iH~I~Ey~~G~~~~~~~aPraNRfI~s~D~~N~~l~~----~e~f~~~l~e~~~~~d~~vlSG~q~l~~~~~~~~~~ 250 (457)
T 1l2l_A 175 EDCIHYIYEFPRNFKVLDFEAPRENRFIGAADDYNPILYV----REEWIERFEEIAKRSELAIISGLHPLTQENHGKPIK 250 (457)
T ss_dssp CCCEEECCEECTTCEETTEECSSCEEEEEEECSSGGGTCC----CHHHHHSHHHHHTTCSEEEEECCTTCCTTTCHHHHH
T ss_pred CCcceEEEEcCCCCeecceecCCCCeEEEEcCCCCCCCcc----cHHHHHHHHhhccCCCEEEEeccccccccchhhhHH
Confidence 111221221 23433 22222221122211 12222334 4599999999985333 22
Q ss_pred HHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhh
Q 019448 174 SIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKV 229 (341)
Q Consensus 174 ~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~ 229 (341)
.....++.....++++-+...+..-.+.....+ .+++++|.+-+|++|+..+...
T Consensus 251 ~~~~~i~~L~~~~~~iH~E~As~~~~~l~~~i~-~ilp~vDSlGmNEqELa~l~~~ 305 (457)
T 1l2l_A 251 LVREHLKILNDLGIRAHLEFAFTPDEVVRLEIV-KLLKHFYSVGLNEVELASVVSV 305 (457)
T ss_dssp HHHHHHHHHHHTTCEEEEECCCCSSHHHHHHHH-HHGGGCSEEEECHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCeEEEEECCcccHHHHHHHH-hhccccccCccCHHHHHHHHHH
Confidence 122333333678899999998765444455556 8999999999999999886443
No 71
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=98.40 E-value=2.3e-05 Score=72.51 Aligned_cols=163 Identities=10% Similarity=0.042 Sum_probs=92.4
Q ss_pred EecCchHHHHHHHHHHHhcCCCcEEE--EeeeecCchhHHHHHHHHhcCcceeeee------------cCCCCceeEEEE
Q 019448 58 YIAGGATQNSIRVAQWMLQIPGATSY--IGCIGKDKFGEEMKKNSKLAGVNVHYYE------------DESASTGTCAVC 123 (341)
Q Consensus 58 ~~~GG~a~n~a~~l~~l~~lg~~v~~--i~~vG~D~~g~~i~~~l~~~gi~~~~~~------------~~~~~t~~~~~~ 123 (341)
.+.||.|..+|..++. +|.++.+ ++.+|. ...+.|.+.+|...... ....+....+++
T Consensus 108 ~~~GGnA~imAn~la~---lg~~~vl~~~~~l~~-----~~~~lf~~~~i~~p~~~~~~~~l~~~~e~~~~~~~~iH~I~ 179 (455)
T 1ua4_A 108 LRMGGQAGIMANLLGG---VYGVPVIVHVPQLSR-----LQANLFLDGPIYVPTLENGEVKLIHPKEFSGDEENCIHYIY 179 (455)
T ss_dssp EEEESHHHHHHHHHTT---TTCCCEEECCSCCCH-----HHHTTSCSSSEEEEEEETTEEEEECGGGCSCCCCCCEEEEE
T ss_pred cccCCcHHHHHHHHHH---cCCCEEEEeCCCCCH-----HHHHhcCCCCeEeecccCCccccccchhhccCCCCCceEEE
Confidence 3999999998888775 5688877 676654 35555553334331110 012233333333
Q ss_pred E-eCCccc-----------eeecccccccCC-cccCCCcchhhhhccceEEEEeccccccC---HHHHHHHHH---HHHh
Q 019448 124 V-VGGERS-----------LVANLSAANCYK-SEHLKKPENWALVEKAKYFYIAGFFLTVS---PDSIQLVAE---HAAA 184 (341)
Q Consensus 124 ~-~~g~~~-----------~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~v~i~~~~~~~~---~~~~~~~~~---~a~~ 184 (341)
- ..|++. ++.....+..+. .+.+.. ...+....+|+++++|++.... .+.....++ ....
T Consensus 180 Ef~~G~~~~~~~aPraNRfI~s~D~~n~~l~~~e~f~~-~l~e~~~~~dl~vlSG~q~l~~~~~~~~~~~~l~~i~~L~~ 258 (455)
T 1ua4_A 180 EFPRGFRVFEFEAPRENRFIGSADDYNTTLFIREEFRE-SFSEVIKNVQLAILSGLQALTKENYKEPFEIVKSNLEVLNE 258 (455)
T ss_dssp EECTTCEETTEECSSCEEEEEECCSSGGGTCCCGGGST-THHHHGGGCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHHH
T ss_pred EcCCCCeecceeccccceeEEecCCCcccCcccHHHHH-HHHhhccCCcEEEEechhcccccchHHHHHHHHHHHHHhcC
Confidence 3 255532 222222112221 122211 1112234499999999984222 122222222 3366
Q ss_pred CCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhc
Q 019448 185 NNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQ 230 (341)
Q Consensus 185 ~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~ 230 (341)
.+.++.+++.+..-.......+ .+++++|.+-+|++|+..+....
T Consensus 259 ~~~~iH~ElAs~~~~~~~~~i~-~ilp~vDSlGmNE~EL~~l~~~l 303 (455)
T 1ua4_A 259 REIPVHLEFAFTPDEKVREEIL-NVLGMFYSVGLNEVELASIMEIL 303 (455)
T ss_dssp TTCCEEEECCCCCCHHHHHHHH-HHGGGCSEEEECHHHHHHHHHHT
T ss_pred CCceEEEEeCCccCHHHHHHHH-hhhccCcccccCHHHHHHHHHHh
Confidence 7789999998765444445556 89999999999999999887653
No 72
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=98.30 E-value=2.3e-05 Score=74.46 Aligned_cols=159 Identities=13% Similarity=0.055 Sum_probs=102.0
Q ss_pred hhhhcc-ceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC--CCcEEecCHHHHHHHhh
Q 019448 152 WALVEK-AKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP--YMDYIFGNETEARTFSK 228 (341)
Q Consensus 152 ~~~l~~-~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~--~~dvl~~n~~E~~~l~~ 228 (341)
.+..+. ++.++|..-.+.. .+.+..+.+.+++.++|+++||-.-.......+..+++++ +.++|.+|..|+..|++
T Consensus 300 ~e~~~~~~~alvin~G~l~~-~~~~~~a~~~a~~~~~PvVlDPVg~~a~~~r~~~~~~Ll~~~~~~vItpN~~E~~~L~g 378 (540)
T 3nl6_A 300 NDLAAIPHATLLLNTGSVAP-PEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLLNNKLLTFGQFSCIKGNSSEILGLAE 378 (540)
T ss_dssp HHHTTSTTCEEEEESSCSCC-HHHHHHHHHHHHTTTCCEEEECTTCTTSHHHHHHHHHHTTSCCCSEEEECHHHHHHHTT
T ss_pred HHHHhccCCeEEEeCCCCCH-HHHHHHHHHHHHHcCCCEEEChHHhhcccccHHHHHHHHhhCCCeEECCCHHHHHHHhC
Confidence 345566 8999997644333 7788888888999999999999653322222344567777 78999999999999987
Q ss_pred hcC-----CC------CCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEEC-------------------CeeEEE
Q 019448 229 VQG-----WE------TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQD-------------------GKLKKF 278 (341)
Q Consensus 229 ~~~-----~~------~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~-------------------~~~~~~ 278 (341)
... .+ .++..++++.+.+ +.-..|++| |+.- +++++ +..+.+
T Consensus 379 ~~~~~~~GVds~~~~~~~d~~~aA~~lA~------~~~~vVvlk-G~~D-~I~dg~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (540)
T 3nl6_A 379 LNKERMKGVDASSGISNELLIQATKIVAF------KYKTVAVCT-GEFD-FIADGTIEGKYSLSKGTNGTSVEDIPCVAV 450 (540)
T ss_dssp C--------------CCHHHHHHHHHHHH------HTTSEEEEC-SSSE-EEEECCGGGBCCSSSCCSSCCTTSSCEEEE
T ss_pred CCcccccccccccccCHHHHHHHHHHHHH------HhCCEEEEc-CCCe-EEECCCccccccccccccccccCCccEEEE
Confidence 431 12 1344566666632 222445555 5533 34444 344544
Q ss_pred eceecCCCcccCCCCCchhhHHHHHHHHhcCC---CHHHHHHHHHH
Q 019448 279 PVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK---PIEECVRAGCY 321 (341)
Q Consensus 279 ~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~---~~~~a~~~a~~ 321 (341)
+.-.+ .-.-.++|.||++.+.+.+.+..+. ++.+|+..|..
T Consensus 451 ~~G~~--~~m~~vtGtGc~Lsg~Iaa~la~~~~~~~~~~Aa~~a~~ 494 (540)
T 3nl6_A 451 EAGPI--EIMGDITASGCSLGSTIACMIGGQPSEGNLFHAVVAGVM 494 (540)
T ss_dssp ECSCC--GGGGSSTTHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHH
T ss_pred CCCCh--hhccCccCchHHHHHHHHHHHhcCcCCCCHHHHHHHHHH
Confidence 42110 1223479999999998888888887 57777776654
No 73
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=98.16 E-value=3.2e-05 Score=66.40 Aligned_cols=158 Identities=15% Similarity=0.071 Sum_probs=90.7
Q ss_pred hhhhccceEEEEecccccc-CHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhc-CCCcEEecCHHHHHHHhhh
Q 019448 152 WALVEKAKYFYIAGFFLTV-SPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVL-PYMDYIFGNETEARTFSKV 229 (341)
Q Consensus 152 ~~~l~~~~~v~i~~~~~~~-~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l-~~~dvl~~n~~E~~~l~~~ 229 (341)
.+....++.++++--.+.. ..+.+....+.+.+.++|+++||-.-.....-.+..++++ .+.++|.+|..|...|++.
T Consensus 51 ~e~~~~a~al~iNiGtl~~~~~~~m~~A~~~A~~~~~PvVLDPVg~gas~~R~~~~~~ll~~~~~vIrgN~sEi~~L~g~ 130 (265)
T 3hpd_A 51 EEMIRLADAVVINIGTLDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISALLGE 130 (265)
T ss_dssp HHHHHHCSEEEEECTTCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEHHHHHHHHHH
T ss_pred HHHHHHCCeEEEECCCCChHHHHHHHHHHHHHHHcCCCEEEcCCCCCCcHHHHHHHHHHHhcCCcEEcCCHHHHHHHhcc
Confidence 3556678888887533211 1245666677888999999999954321111112223332 3689999999999999875
Q ss_pred cCC----C-----CCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHH
Q 019448 230 QGW----E-----TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG 300 (341)
Q Consensus 230 ~~~----~-----~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~a 300 (341)
... + .++..++++.+.+ +.+ ..|++| |+. -++.++++.+.++.= +..--..+|.||+..+
T Consensus 131 ~~~~~gvds~~~~~~d~~~~a~~lA~-----~~~-~vVvlk-G~~-d~I~dg~~~~~~~~G---~~~m~~vtGtGc~Lsg 199 (265)
T 3hpd_A 131 EGKTRGVDSLEYGEEEAKKLTMNAAR-----EFN-TTVAVT-GAV-DYVSDGRRTFAVYNG---HELLGRVTGTGCMVAA 199 (265)
T ss_dssp HC----------CHHHHHHHHHHHHH-----HTT-SEEEEE-SSS-EEEECSSCEEEECCC---CGGGGGSTTHHHHHHH
T ss_pred cCCCCCccCccccHHHHHHHHHHHHH-----HhC-CEEEEe-CCC-eEEEcCCEEEEECCC---ChHhhcCCccchHHHH
Confidence 422 1 1234566666642 222 345555 653 344555555554421 1122335899999766
Q ss_pred HHHHHHhcCCCHHHHHHHHHH
Q 019448 301 GFLSQLVQEKPIEECVRAGCY 321 (341)
Q Consensus 301 g~~~~l~~g~~~~~a~~~a~~ 321 (341)
.+.+.+..+ ++.+|...|..
T Consensus 200 ~iaa~lA~~-~~~~Aa~~a~~ 219 (265)
T 3hpd_A 200 LTGAFVAVT-EPLKATTSALV 219 (265)
T ss_dssp HHHHHHTTS-CHHHHHHHHHH
T ss_pred HHHHHHhcC-ChHHHHHHHHH
Confidence 555555555 55566655543
No 74
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=97.35 E-value=0.00077 Score=62.95 Aligned_cols=147 Identities=18% Similarity=0.183 Sum_probs=86.7
Q ss_pred ccceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcC----
Q 019448 156 EKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQG---- 231 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~---- 231 (341)
+++|.+++.+- +..+...+..++ .. . ++++|...-.. ..+.+.++...+|.||..|+.+|++..+
T Consensus 291 ~~~~a~~iGPG-lG~~~~~l~~~l---~~-~-p~VlDADaL~~-----~~~~~~~~~~~VlTPh~~E~~rL~g~~~~~v~ 359 (475)
T 3k5w_A 291 NLLSAFALGMG-LENIPKDFNRWL---EL-A-PCVLDAGVFYH-----KEILQALEKEAVLTPHPKEFLSLLNLVGINIS 359 (475)
T ss_dssp SSCSEEEECTT-CSSCCTTHHHHH---HH-S-CEEEEGGGGGS-----GGGGTTTTSSEEEECCHHHHHHHHHHTSCCCC
T ss_pred cCCCEEEEcCC-CCCCHHHHHHHH---hc-C-CEEEECcccCC-----chhhhccCCCEEECCCHHHHHHHhCCccCCCC
Confidence 57788888752 222221133333 23 4 88888864321 1122344556899999999999998621
Q ss_pred -CC-CCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcC
Q 019448 232 -WE-TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE 309 (341)
Q Consensus 232 -~~-~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g 309 (341)
.+ .++..++++++.+ ..+...|++| |..- .+++++..+..+. -..-..+.|.||++.+.+.+.+.+|
T Consensus 360 ~~~~~~d~~~aa~~la~-----~~g~~~VvlK-G~~~-vI~~~~~~~~~~~----g~~~mat~GtGdvLsg~Iaa~lA~g 428 (475)
T 3k5w_A 360 MLELLDNKLEIARDFSQ-----KYPKVVLLLK-GANT-LIAHQGQVFINIL----GSVALAKAGSGDVLAGLILSLLSQN 428 (475)
T ss_dssp TTSGGGSCC--CHHHHH-----HCTTEEEEEC-SSSE-EEEETTEEEEECC----CCGGGCSTTHHHHHHHHHHHHHHTT
T ss_pred cchhHHHHHHHHHHHHH-----HcCCeEEEEe-CCCC-EEECCCEEEEECC----CCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 11 1244456666632 1112345554 5543 4445555444332 1244568999999999999999999
Q ss_pred CCHHHHHHHHHHHhh
Q 019448 310 KPIEECVRAGCYTSH 324 (341)
Q Consensus 310 ~~~~~a~~~a~~~Aa 324 (341)
.++.+|+..|...-+
T Consensus 429 ~~~~~Aa~~a~~lhg 443 (475)
T 3k5w_A 429 YTPLDAAINASLAHA 443 (475)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 999999887754433
No 75
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=64.50 E-value=33 Score=24.32 Aligned_cols=68 Identities=15% Similarity=0.045 Sum_probs=43.7
Q ss_pred hhhhhccceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhc-CCCcEEecCHHH
Q 019448 151 NWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVL-PYMDYIFGNETE 222 (341)
Q Consensus 151 ~~~~l~~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l-~~~dvl~~n~~E 222 (341)
.|+.+...|++++-. .-+.+.+...++.|++.|+.+++-+....- ..-.+.-+++- ..+|+-.++..|
T Consensus 71 iwerypqldvvvivt---tddkewikdfieeakergvevfvvynnkdd-drrkeaqqefrsdgvdvrtvsdke 139 (162)
T 2l82_A 71 IWERYPQLDVVVIVT---TDDKEWIKDFIEEAKERGVEVFVVYNNKDD-DRRKEAQQEFRSDGVDVRTVSDKE 139 (162)
T ss_dssp HHHHCTTCCEEEEEE---CCCHHHHHHHHHHHHHTTCEEEEEEECSCH-HHHHHHHHHHCCSSCEEEEESSHH
T ss_pred HHHhCCCCcEEEEEe---cCcHHHHHHHHHHHHhcCcEEEEEecCCCc-hhHHHHHHHhhhcCceeeecCCHH
Confidence 456677788888753 346789999999999999875554432211 11223333443 468888877654
No 76
>2fcj_A Small toprim domain protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: MES; 1.30A {Geobacillus stearothermophilus} SCOP: c.136.1.1 PDB: 2i5r_A*
Probab=55.70 E-value=24 Score=25.78 Aligned_cols=78 Identities=9% Similarity=0.158 Sum_probs=56.5
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCC
Q 019448 157 KAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDD 236 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d 236 (341)
..+++..+|+ ++.+.+..+.+.++.+++.+..|+... -+.-+..+.+.++.+...++...+. +.+.-+
T Consensus 26 ~~~iI~t~Gs---i~~~~l~~I~~~~~~r~VIi~TD~D~~--GekIRk~i~~~lp~~~hafi~r~~~-------gVE~a~ 93 (119)
T 2fcj_A 26 PVVIVCTNGT---ISDARLEELADELEGYDVYLLADADEA--GEKLRRQFRRMFPEAEHLYIDRAYR-------EVAAAP 93 (119)
T ss_dssp CCEEEECCSC---CCHHHHHHHHHHTTTSEEEEECCSSHH--HHHHHHHHHHHCTTSEEECCCTTTC-------STTTSC
T ss_pred CCCEEEeCCc---cCHHHHHHHHHHhcCCCEEEEECCCcc--HHHHHHHHHHHCCCCcEEeccCCcc-------CcccCC
Confidence 5678887774 677778888777777788888888642 2345566778999999988887753 455667
Q ss_pred HHHHHHHHhc
Q 019448 237 VEEIALKLSQ 246 (341)
Q Consensus 237 ~~~~~~~l~~ 246 (341)
++.+.+.|.+
T Consensus 94 ~~~I~~aL~~ 103 (119)
T 2fcj_A 94 IWHLAQVLLR 103 (119)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 7777777744
No 77
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=48.85 E-value=35 Score=28.07 Aligned_cols=51 Identities=18% Similarity=0.172 Sum_probs=41.3
Q ss_pred ccceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEe
Q 019448 156 EKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIF 217 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~ 217 (341)
...|++.++|. .....+.+.++++..++...|+++-|+.+. .+.+++|.++
T Consensus 30 ~GtD~i~vGGs-~gvt~~~~~~~v~~ik~~~~Pvvlfp~~~~----------~v~~gaD~~l 80 (228)
T 3vzx_A 30 SGTDAVIIGGS-DGVTEDNVLRMMSKVRRFLVPCVLEVSAIE----------AIVPGFDLYF 80 (228)
T ss_dssp SSCSEEEECCC-SCCCHHHHHHHHHHHTTSSSCEEEECSCGG----------GCCSCCSEEE
T ss_pred cCCCEEEECCc-CCCCHHHHHHHHHHhhccCCCEEEeCCCHH----------HccccCCEEE
Confidence 45899999984 456788899999999988899999988743 4678888776
No 78
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=45.54 E-value=1e+02 Score=23.68 Aligned_cols=66 Identities=11% Similarity=0.099 Sum_probs=40.2
Q ss_pred eEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEec-----CHHHHHHHhh
Q 019448 159 KYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFG-----NETEARTFSK 228 (341)
Q Consensus 159 ~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~-----n~~E~~~l~~ 228 (341)
+.|.++|--+.+.++.+.++++.+++.+..+.+.-.+.. ..+.++.+++..|.+.+ +.+.-..+.+
T Consensus 5 ~~v~~tGGEPll~~~~~~~l~~~~~~~g~~~~l~TNG~l----~~~~~~~l~~~~d~v~isld~~~~~~~~~~~g 75 (182)
T 3can_A 5 GGVTFCGGEPLLHPEFLIDILKRCGQQGIHRAVDTTLLA----RKETVDEVMRNCELLLIDLKSMDSTVHQTFCD 75 (182)
T ss_dssp CCEEECSSTGGGSHHHHHHHHHHHHHTTCCEEEECTTCC----CHHHHHHHHHTCSEEEEECCCSCHHHHHHHHS
T ss_pred CEEEEEcccccCCHHHHHHHHHHHHHCCCcEEEECCCCC----CHHHHHHHHhhCCEEEEECCCCCHHHHHHHhC
Confidence 456666644555677778899999998988877765543 12334455555676554 3444444443
No 79
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=38.54 E-value=2.1e+02 Score=26.42 Aligned_cols=113 Identities=11% Similarity=-0.027 Sum_probs=61.4
Q ss_pred ceEecCchHHHHHHHHHHHhc--CCCcEEEEeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceee
Q 019448 56 VEYIAGGATQNSIRVAQWMLQ--IPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVA 133 (341)
Q Consensus 56 ~~~~~GG~a~n~a~~l~~l~~--lg~~v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~ 133 (341)
.-..+|.++.+.|..++.+-. .|.+..++..- +. +.+...+.-.|+...++... +++.
T Consensus 137 ~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn--~H--KSv~kAliL~Gl~Pv~V~p~----------~d~~------ 196 (501)
T 3hl2_A 137 CFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRI--DQ--KSCFKSMITAGFEPVVIENV----------LEGD------ 196 (501)
T ss_dssp EEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECC--CC--HHHHHHHHHTTCEEEEECEE----------EETT------
T ss_pred EEEECcHHHHHHHHHHHHcCcccCCCCEEEEecc--hH--HHHHHHHHHcCCeEEEEeee----------eccc------
Confidence 455788988898888875331 13455666542 22 56777787788887776421 0111
Q ss_pred cccccccCCcccCCCcchhhhhc-cceEEE-Eeccc-cccCHHHHHHHHHHHHhCCCeEEEeCC
Q 019448 134 NLSAANCYKSEHLKKPENWALVE-KAKYFY-IAGFF-LTVSPDSIQLVAEHAAANNKVFMMNLS 194 (341)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~l~-~~~~v~-i~~~~-~~~~~~~~~~~~~~a~~~~~~v~~d~~ 194 (341)
...++++.+.. ..+... +.-+++ .+... .....+-+.++.+.|+++++++.+|-.
T Consensus 197 ----~~~id~e~le~--aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeA 254 (501)
T 3hl2_A 197 ----ELRTDLKAVEA--KVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNA 254 (501)
T ss_dssp ----EEEECHHHHHH--HHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECT
T ss_pred ----ccCCCHHHHHH--HHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCc
Confidence 01222333331 111111 122222 22111 122345688899999999999999963
No 80
>2orv_A Thymidine kinase; TP4A (P1-(5'-adenosyl)P4-(5'- (2'deoxythymidil))tetraphosphate, transferase; HET: 4TA; 2.30A {Homo sapiens} SCOP: c.37.1.24 g.39.1.14
Probab=36.91 E-value=1e+02 Score=25.35 Aligned_cols=62 Identities=13% Similarity=-0.012 Sum_probs=38.7
Q ss_pred hhhccceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEe
Q 019448 153 ALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIF 217 (341)
Q Consensus 153 ~~l~~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~ 217 (341)
..+.+.|+|.++-..+-. + +.++++.+...+++|++--....+.....+...++++.+|.+.
T Consensus 86 ~~~~~~dvViIDEaQF~~--~-v~el~~~l~~~gi~VI~~GL~~DF~~~~F~~~~~Ll~~AD~Vt 147 (234)
T 2orv_A 86 QEALGVAVIGIDEGQFFP--D-IVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVV 147 (234)
T ss_dssp HHHTTCSEEEESSGGGCT--T-HHHHHHHHHHTTCEEEEECCSBCTTSSBCTTGGGGGGGCSEEE
T ss_pred HHhccCCEEEEEchhhhh--h-HHHHHHHHHhCCCEEEEEecccccccCCcccHHHHHHhcccEE
Confidence 345678999999766442 2 7888888888999877643321100001122457788888876
No 81
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=33.65 E-value=57 Score=26.97 Aligned_cols=51 Identities=20% Similarity=0.328 Sum_probs=40.2
Q ss_pred ccceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEe
Q 019448 156 EKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIF 217 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~ 217 (341)
..+|++.+++. .....+.+.++++..|+...|+++-++.+ ..+.+.+|.++
T Consensus 35 ~GtDaI~vGgs-~gvt~~~~~~~v~~ik~~~~Piil~p~~~----------~~~~~gaD~il 85 (235)
T 3w01_A 35 SQTDAIMIGGT-DDVTEDNVIHLMSKIRRYPLPLVLEISNI----------ESVMPGFDFYF 85 (235)
T ss_dssp SSCSEEEECCS-SCCCHHHHHHHHHHHTTSCSCEEEECCCS----------TTCCTTCSEEE
T ss_pred cCCCEEEECCc-CCcCHHHHHHHHHHhcCcCCCEEEecCCH----------HHhhcCCCEEE
Confidence 45899999984 45678889999999999888988888754 24567888776
No 82
>1ztd_A Hypothetical protein PFU-631545-001; structural genomics, southeast collaboratory for structural genomics, secsg; 2.00A {Pyrococcus furiosus} SCOP: a.149.1.2
Probab=31.61 E-value=42 Score=23.88 Aligned_cols=31 Identities=19% Similarity=0.089 Sum_probs=27.3
Q ss_pred cCCCCCchhhHHHHHHHHhcC-CCHHHHHHHH
Q 019448 289 VDTNGAGDAFVGGFLSQLVQE-KPIEECVRAG 319 (341)
Q Consensus 289 vd~tGAGDaf~ag~~~~l~~g-~~~~~a~~~a 319 (341)
.|-.|-||..-|-+.++|+.| .+.+||++.-
T Consensus 64 ~DKh~kGd~aEA~iAyAWleG~is~eEaveil 95 (133)
T 1ztd_A 64 VDKHAKGDYAEALIAKAWLMGLISEREAVEII 95 (133)
T ss_dssp GGTTCHHHHHHHHHHHHHHTTSSCHHHHHHHH
T ss_pred ccccCccHHHHHHHHHHHHhccccHHHHHHHH
Confidence 577899999999999999998 5899998764
No 83
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=29.63 E-value=91 Score=25.27 Aligned_cols=54 Identities=7% Similarity=0.041 Sum_probs=31.7
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeC-----CchhHHHHHHHHHHhhcCCCcEEe
Q 019448 157 KAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNL-----SAPFICEFFKDALEKVLPYMDYIF 217 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~-----~~~~~~~~~~~~~~~~l~~~dvl~ 217 (341)
..|+|.++-..+ .+++.+ +.++.+...+++|++-- +...+ +....+++.+|.+.
T Consensus 101 ~~dvViIDEaQF-~~~~~V-~~l~~l~~~~~~Vi~~Gl~~DF~~~~F-----~~~~~Ll~~AD~Vt 159 (214)
T 2j9r_A 101 EMDVIAIDEVQF-FDGDIV-EVVQVLANRGYRVIVAGLDQDFRGLPF-----GQVPQLMAIAEHVT 159 (214)
T ss_dssp SCCEEEECCGGG-SCTTHH-HHHHHHHHTTCEEEEEECSBCTTSCBC-----TTHHHHHHHCSEEE
T ss_pred CCCEEEEECccc-CCHHHH-HHHHHHhhCCCEEEEEecccccccCcc-----ccHHHHHHhcccEE
Confidence 489999987554 455666 55565555688866533 22211 12445666677665
No 84
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=26.85 E-value=1.4e+02 Score=24.63 Aligned_cols=45 Identities=13% Similarity=-0.056 Sum_probs=25.5
Q ss_pred CchHHHHHHHHHHHhcCCCcEEEEeeeecCchhHHHHHHHHhcCcceeee
Q 019448 61 GGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYY 110 (341)
Q Consensus 61 GG~a~n~a~~l~~l~~lg~~v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~ 110 (341)
||-|.-+|..|++ .|.+|.+++.- ....+.+.+.++..+.+...+
T Consensus 14 ~GIG~aia~~la~---~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~ 58 (264)
T 3tfo_A 14 GGIGEGIARELGV---AGAKILLGARR--QARIEAIATEIRDAGGTALAQ 58 (264)
T ss_dssp SHHHHHHHHHHHH---TTCEEEEEESS--HHHHHHHHHHHHHTTCEEEEE
T ss_pred cHHHHHHHHHHHH---CCCEEEEEECC--HHHHHHHHHHHHhcCCcEEEE
Confidence 4666666666654 57887766431 123345566666666554443
No 85
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=26.74 E-value=1.4e+02 Score=26.66 Aligned_cols=38 Identities=11% Similarity=0.064 Sum_probs=28.1
Q ss_pred cceEEEEec----c-ccccCHHHHHHHHHHHHh--CCCeEEEeCC
Q 019448 157 KAKYFYIAG----F-FLTVSPDSIQLVAEHAAA--NNKVFMMNLS 194 (341)
Q Consensus 157 ~~~~v~i~~----~-~~~~~~~~~~~~~~~a~~--~~~~v~~d~~ 194 (341)
+.+++++.. . ++......+.++.+.+++ ++..+++|-.
T Consensus 159 ~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a 203 (409)
T 3jzl_A 159 KTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNC 203 (409)
T ss_dssp TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECT
T ss_pred CCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCC
Confidence 467888875 2 223345678889999999 8999999875
No 86
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=26.13 E-value=1.4e+02 Score=24.11 Aligned_cols=45 Identities=13% Similarity=-0.064 Sum_probs=25.7
Q ss_pred CchHHHHHHHHHHHhcCCCcEEEEeeeecCchhHHHHHHHHhcCcceee
Q 019448 61 GGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHY 109 (341)
Q Consensus 61 GG~a~n~a~~l~~l~~lg~~v~~i~~vG~D~~g~~i~~~l~~~gi~~~~ 109 (341)
||-|..+|..+++ .|.+|.++..-.. ...+.+.+.++..|.+...
T Consensus 14 ~gIG~~ia~~l~~---~G~~V~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 58 (246)
T 3osu_A 14 RGIGRSIALQLAE---EGYNVAVNYAGSK-EKAEAVVEEIKAKGVDSFA 58 (246)
T ss_dssp SHHHHHHHHHHHH---TTCEEEEEESSCH-HHHHHHHHHHHHTTSCEEE
T ss_pred ChHHHHHHHHHHH---CCCEEEEEeCCCH-HHHHHHHHHHHhcCCcEEE
Confidence 4667776666654 5788876543222 2345566666666554443
No 87
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=24.37 E-value=1.1e+02 Score=26.15 Aligned_cols=50 Identities=12% Similarity=0.021 Sum_probs=39.5
Q ss_pred ccceEEEEeccccccC--HHHHHHHHHHHHh-CCCeEEE-eC---CchhHHHHHHHHHHhhcCCCcEEe
Q 019448 156 EKAKYFYIAGFFLTVS--PDSIQLVAEHAAA-NNKVFMM-NL---SAPFICEFFKDALEKVLPYMDYIF 217 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~--~~~~~~~~~~a~~-~~~~v~~-d~---~~~~~~~~~~~~~~~~l~~~dvl~ 217 (341)
...|.+.++ +.++. .+.+.++++.+|+ ..+|+++ .| ++.. .+.+++|.++
T Consensus 65 sGtDai~VG--S~~vt~~~~~~~~~v~~ik~~~~lPvil~fPP~~g~~~----------~i~~~aDa~l 121 (286)
T 3vk5_A 65 LGFAAVLLA--STDYESFESHMEPYVAAVKAATPLPVVLHFPPRPGAGF----------PVVRGADALL 121 (286)
T ss_dssp TTCSCEEEE--CSCCSSHHHHHHHHHHHHHHHCSSCEEEECCCBTTTBS----------CCCTTCSEEE
T ss_pred cCCCEEEEc--cCCCCcchHHHHHHHHHHHHhCCCCEEEECCCCCCCcc----------ccccCCCEEE
Confidence 458999998 44667 8889999999998 7899999 77 5432 5678899887
No 88
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=23.43 E-value=2.2e+02 Score=25.37 Aligned_cols=38 Identities=5% Similarity=0.166 Sum_probs=24.6
Q ss_pred cceEEEEeccccc-cCHHHHHHHHHHHHh--CCCeEEEeCC
Q 019448 157 KAKYFYIAGFFLT-VSPDSIQLVAEHAAA--NNKVFMMNLS 194 (341)
Q Consensus 157 ~~~~v~i~~~~~~-~~~~~~~~~~~~a~~--~~~~v~~d~~ 194 (341)
+.++|++...+.. ....-+.++.+.|++ +++.+++|-.
T Consensus 167 ~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a 207 (415)
T 2fq6_A 167 NTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNT 207 (415)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECT
T ss_pred CCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECC
Confidence 3567777654321 111236777788888 9999888875
No 89
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=23.25 E-value=1.8e+02 Score=25.23 Aligned_cols=80 Identities=9% Similarity=0.066 Sum_probs=45.5
Q ss_pred hccceEEEEecccccc---CHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcC
Q 019448 155 VEKAKYFYIAGFFLTV---SPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQG 231 (341)
Q Consensus 155 l~~~~~v~i~~~~~~~---~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~ 231 (341)
++.-|-|.+-+-+... .++.+...++.+++.|..+.+.+.. ...-.++.-+.+|
T Consensus 9 L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~--------------~~~~~~~ag~d~~--------- 65 (331)
T 4e5s_A 9 LKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHA--------------EEIDRFASSSISS--------- 65 (331)
T ss_dssp CCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTT--------------TCCCTTSSCCHHH---------
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCch--------------hcccCccCCCHHH---------
Confidence 4444444444333223 3678888899999999988776532 1122233333222
Q ss_pred CCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCce
Q 019448 232 WETDDVEEIALKLSQWPKASEIRKRTAVITQGADPV 267 (341)
Q Consensus 232 ~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~ 267 (341)
..+++.+.+ .+..++.|++++|..|+
T Consensus 66 ----Ra~dL~~a~------~Dp~i~aI~~~rGG~g~ 91 (331)
T 4e5s_A 66 ----RVQDLHEAF------RDPNVKAILTTLGGYNS 91 (331)
T ss_dssp ----HHHHHHHHH------HCTTEEEEEESCCCSCG
T ss_pred ----HHHHHHHHh------hCCCCCEEEEccccccH
Confidence 122334444 45667888888888876
No 90
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=22.99 E-value=1.7e+02 Score=24.22 Aligned_cols=62 Identities=21% Similarity=0.125 Sum_probs=46.6
Q ss_pred hhhccceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC--CCcEEecCHHHH
Q 019448 153 ALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP--YMDYIFGNETEA 223 (341)
Q Consensus 153 ~~l~~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~--~~dvl~~n~~E~ 223 (341)
....++|++.+... .++.+.+..+++.+++.|..+.++..... + +...+. .+|++-+|..++
T Consensus 119 a~~~GAD~ilLi~a--~l~~~~l~~l~~~a~~lGl~~lvEv~~~e------E-~~~A~~l~g~~iIGinnr~l 182 (251)
T 1i4n_A 119 ASSVGADAILIIAR--ILTAEQIKEIYEAAEELGMDSLVEVHSRE------D-LEKVFSVIRPKIIGINTRDL 182 (251)
T ss_dssp HHHTTCSEEEEEGG--GSCHHHHHHHHHHHHTTTCEEEEEECSHH------H-HHHHHTTCCCSEEEEECBCT
T ss_pred HHHcCCCEEEEecc--cCCHHHHHHHHHHHHHcCCeEEEEeCCHH------H-HHHHHhcCCCCEEEEeCccc
Confidence 34578999999875 34668899999999999999999998642 2 444333 689998886554
No 91
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=22.56 E-value=2e+02 Score=24.70 Aligned_cols=40 Identities=3% Similarity=-0.017 Sum_probs=26.0
Q ss_pred hccceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCC
Q 019448 155 VEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLS 194 (341)
Q Consensus 155 l~~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~ 194 (341)
++.-|-|.+-+.+...+.+.+...++.+++.|..+.+.+.
T Consensus 14 L~~Gd~I~ivaPSs~~~~~~~~~~~~~L~~~G~~v~~~~~ 53 (311)
T 1zl0_A 14 QPIDGRVALIAPASAIATDVLEATLRQLEVHGVDYHLGRH 53 (311)
T ss_dssp CCCCSEEEEECCSBCCCHHHHHHHHHHHHHTTCCEEECTT
T ss_pred CCCcCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEECcc
Confidence 4444444444333334577788888999999988877653
No 92
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=20.32 E-value=94 Score=24.04 Aligned_cols=19 Identities=21% Similarity=0.228 Sum_probs=13.1
Q ss_pred CchhHHHHHHHHhcCccee
Q 019448 90 DKFGEEMKKNSKLAGVNVH 108 (341)
Q Consensus 90 D~~g~~i~~~l~~~gi~~~ 108 (341)
|..|.++.+.|++.|+++.
T Consensus 39 D~ng~~L~~~L~~~G~~v~ 57 (178)
T 3iwt_A 39 DESGDIIKQLLIENGHKII 57 (178)
T ss_dssp CHHHHHHHHHHHHTTCEEE
T ss_pred cchHHHHHHHHHHCCCEEE
Confidence 6677777777777776554
No 93
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=20.04 E-value=2.5e+02 Score=22.77 Aligned_cols=51 Identities=8% Similarity=0.053 Sum_probs=32.6
Q ss_pred ceEEEEeccccccCHHHHHHHHH---HHHhCCCe--EEEeCCchhHHHHHHHHHHhhcC--CCcEEe
Q 019448 158 AKYFYIAGFFLTVSPDSIQLVAE---HAAANNKV--FMMNLSAPFICEFFKDALEKVLP--YMDYIF 217 (341)
Q Consensus 158 ~~~v~i~~~~~~~~~~~~~~~~~---~a~~~~~~--v~~d~~~~~~~~~~~~~~~~~l~--~~dvl~ 217 (341)
+|++.+.... ..+.+...++ .+++.|.+ +.++|..+. +.++.+++ .+|++.
T Consensus 86 Ad~itvH~ea---~~~~~~~~i~~~~~i~~~G~k~gvalnp~tp~------~~~~~~l~~g~~D~Vl 143 (227)
T 1tqx_A 86 SNQLTFHFEA---LNEDTERCIQLAKEIRDNNLWCGISIKPKTDV------QKLVPILDTNLINTVL 143 (227)
T ss_dssp SSEEEEEGGG---GTTCHHHHHHHHHHHHTTTCEEEEEECTTSCG------GGGHHHHTTTCCSEEE
T ss_pred CCEEEEeecC---CccCHHHHHHHHHHHHHcCCeEEEEeCCCCcH------HHHHHHhhcCCcCEEE
Confidence 8888775533 1213455556 88999987 555555442 33667788 899984
No 94
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=20.01 E-value=2e+02 Score=19.00 Aligned_cols=36 Identities=19% Similarity=0.051 Sum_probs=26.1
Q ss_pred ccceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCC
Q 019448 156 EKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLS 194 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~ 194 (341)
..+.++++.. +.+++....+...|.++++|+..-.+
T Consensus 26 gkaklViiA~---D~~~~~~~~i~~lc~~~~Ip~~~v~s 61 (82)
T 3v7e_A 26 GSVKEVVVAK---DADPILTSSVVSLAEDQGISVSMVES 61 (82)
T ss_dssp TCEEEEEEET---TSCHHHHHHHHHHHHHHTCCEEEESC
T ss_pred CCeeEEEEeC---CCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 3567777765 56777777887888888888766554
Done!