Query 019457
Match_columns 340
No_of_seqs 186 out of 1128
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 16:23:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019457.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019457hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hcn_A Ferrochelatase, mitocho 100.0 4.6E-69 1.6E-73 528.3 29.3 235 97-340 2-241 (359)
2 1lbq_A Ferrochelatase; rossman 100.0 2.4E-67 8.3E-72 516.7 29.2 238 96-340 4-246 (362)
3 2h1v_A Ferrochelatase; rossman 100.0 3.2E-58 1.1E-62 442.9 25.3 218 96-339 2-223 (310)
4 2xvy_A Chelatase, putative; me 99.7 5.3E-16 1.8E-20 144.7 14.4 127 178-319 30-171 (269)
5 2jh3_A Ribosomal protein S2-re 99.5 7.9E-15 2.7E-19 148.5 8.3 155 162-339 9-180 (474)
6 2xwp_A Sirohydrochlorin cobalt 99.3 1.8E-11 6.1E-16 114.4 15.2 129 163-299 9-150 (264)
7 3lyh_A Cobalamin (vitamin B12) 98.9 1.6E-08 5.5E-13 84.0 12.0 112 162-280 11-123 (126)
8 1tjn_A Sirohydrochlorin cobalt 98.8 3.6E-09 1.2E-13 91.7 6.8 111 163-281 31-150 (156)
9 2xws_A Sirohydrochlorin cobalt 98.8 1.2E-08 4.3E-13 84.8 9.3 110 163-280 10-128 (133)
10 2xwp_A Sirohydrochlorin cobalt 97.8 0.00013 4.3E-09 67.9 11.6 104 163-279 144-257 (264)
11 2h1v_A Ferrochelatase; rossman 97.5 0.00033 1.1E-08 66.8 10.0 104 166-279 194-309 (310)
12 2xvy_A Chelatase, putative; me 97.5 0.00011 3.8E-09 67.9 6.4 105 163-280 153-267 (269)
13 3hcn_A Ferrochelatase, mitocho 97.4 0.0011 3.6E-08 64.9 11.3 112 163-281 207-328 (359)
14 1lbq_A Ferrochelatase; rossman 97.2 0.00045 1.5E-08 67.6 7.0 111 164-280 213-328 (362)
15 2jh3_A Ribosomal protein S2-re 94.5 0.059 2E-06 54.4 7.1 100 169-279 154-266 (474)
16 4b4o_A Epimerase family protei 74.8 6.2 0.00021 35.4 6.8 35 99-135 211-247 (298)
17 3fkr_A L-2-keto-3-deoxyarabona 47.7 1.2E+02 0.0043 28.0 10.5 53 188-244 76-134 (309)
18 2ojp_A DHDPS, dihydrodipicolin 44.6 1.5E+02 0.0053 27.0 10.5 52 188-243 69-123 (292)
19 2ehh_A DHDPS, dihydrodipicolin 43.8 1.9E+02 0.0065 26.4 11.2 53 188-244 68-123 (294)
20 3cpr_A Dihydrodipicolinate syn 43.8 2E+02 0.0067 26.5 11.2 53 188-244 84-139 (304)
21 3qze_A DHDPS, dihydrodipicolin 43.4 1.9E+02 0.0067 26.8 11.1 53 188-244 91-146 (314)
22 2yxb_A Coenzyme B12-dependent 42.7 44 0.0015 28.1 5.9 106 99-219 18-126 (161)
23 2yxg_A DHDPS, dihydrodipicolin 42.5 1.9E+02 0.0065 26.3 10.8 53 188-244 68-123 (289)
24 1xky_A Dihydrodipicolinate syn 41.9 2E+02 0.0069 26.4 10.9 53 188-244 80-135 (301)
25 1o5k_A DHDPS, dihydrodipicolin 41.8 1.6E+02 0.0055 27.2 10.2 50 189-242 81-133 (306)
26 3flu_A DHDPS, dihydrodipicolin 40.8 2.2E+02 0.0074 26.1 11.2 53 188-244 75-130 (297)
27 1uta_A FTSN, MSGA, cell divisi 40.2 15 0.00052 27.2 2.3 47 173-219 20-75 (81)
28 3si9_A DHDPS, dihydrodipicolin 39.8 2.2E+02 0.0076 26.4 10.9 53 188-244 90-145 (315)
29 3lub_A Putative creatinine ami 39.6 58 0.002 29.6 6.6 51 173-223 48-119 (254)
30 2wkj_A N-acetylneuraminate lya 39.6 1.5E+02 0.0051 27.3 9.6 53 188-244 79-134 (303)
31 1f6k_A N-acetylneuraminate lya 38.9 1.6E+02 0.0055 26.9 9.7 53 188-244 72-127 (293)
32 2v9d_A YAGE; dihydrodipicolini 37.9 2.2E+02 0.0074 26.9 10.6 52 188-243 99-153 (343)
33 3d0c_A Dihydrodipicolinate syn 37.7 2.3E+02 0.0078 26.2 10.6 52 188-244 80-134 (314)
34 2rfg_A Dihydrodipicolinate syn 37.3 1.9E+02 0.0063 26.6 9.8 52 189-244 69-123 (297)
35 2vc6_A MOSA, dihydrodipicolina 36.8 2.4E+02 0.0084 25.6 10.8 52 189-244 69-123 (292)
36 3rpe_A MDAB, modulator of drug 36.5 1.9E+02 0.0066 25.5 9.4 69 169-243 42-110 (218)
37 1t5b_A Acyl carrier protein ph 36.4 1.8E+02 0.006 23.9 8.8 23 165-187 9-33 (201)
38 3l21_A DHDPS, dihydrodipicolin 36.3 2.3E+02 0.0077 26.1 10.3 52 187-242 82-136 (304)
39 2r8w_A AGR_C_1641P; APC7498, d 35.1 2.3E+02 0.0079 26.5 10.3 53 188-244 102-157 (332)
40 3daq_A DHDPS, dihydrodipicolin 34.9 2E+02 0.0069 26.2 9.7 54 187-244 69-125 (292)
41 3na8_A Putative dihydrodipicol 34.1 2.6E+02 0.0088 25.9 10.3 53 188-244 92-147 (315)
42 1x60_A Sporulation-specific N- 33.2 39 0.0013 24.5 3.6 45 173-217 20-73 (79)
43 3m5v_A DHDPS, dihydrodipicolin 32.8 2.9E+02 0.0099 25.3 11.1 52 189-244 77-131 (301)
44 3rot_A ABC sugar transporter, 32.6 2.5E+02 0.0085 24.4 11.1 14 203-216 75-88 (297)
45 3e96_A Dihydrodipicolinate syn 31.7 1.3E+02 0.0046 27.8 7.9 57 183-244 75-134 (316)
46 3b4u_A Dihydrodipicolinate syn 30.4 2.5E+02 0.0087 25.6 9.5 62 179-244 62-127 (294)
47 3eb2_A Putative dihydrodipicol 29.6 3.1E+02 0.01 25.1 10.0 53 188-244 72-127 (300)
48 3tak_A DHDPS, dihydrodipicolin 29.4 3.2E+02 0.011 24.8 10.8 53 188-244 69-124 (291)
49 1o97_C Electron transferring f 29.2 1.9E+02 0.0064 26.3 8.3 50 195-245 61-110 (264)
50 3a5f_A Dihydrodipicolinate syn 28.4 1.9E+02 0.0065 26.4 8.2 46 189-238 70-118 (291)
51 4dpp_A DHDPS 2, dihydrodipicol 27.3 2E+02 0.0067 27.6 8.4 50 187-240 126-178 (360)
52 3jrn_A AT1G72930 protein; TIR 26.9 77 0.0026 27.4 4.9 82 174-265 23-108 (176)
53 2ftp_A Hydroxymethylglutaryl-C 26.6 1.1E+02 0.0037 28.2 6.2 46 176-221 126-179 (302)
54 3k9c_A Transcriptional regulat 26.2 1.2E+02 0.0041 26.4 6.3 11 205-216 80-90 (289)
55 3jy6_A Transcriptional regulat 26.0 3.1E+02 0.011 23.4 8.9 13 204-216 75-87 (276)
56 3ngf_A AP endonuclease, family 25.6 3.3E+02 0.011 23.5 9.7 32 190-221 12-43 (269)
57 1ydo_A HMG-COA lyase; TIM-barr 25.3 89 0.0031 29.1 5.4 46 176-221 124-177 (307)
58 3szu_A ISPH, 4-hydroxy-3-methy 25.1 37 0.0013 32.5 2.7 38 285-322 77-124 (328)
59 2cw6_A Hydroxymethylglutaryl-C 24.4 2.5E+02 0.0086 25.6 8.3 42 180-221 127-176 (298)
60 3dbi_A Sugar-binding transcrip 24.2 3.7E+02 0.013 23.8 9.3 8 97-104 61-68 (338)
61 3k6t_A Female germline-specifi 23.6 18 0.00062 26.4 0.2 45 115-163 5-50 (60)
62 3dlo_A Universal stress protei 22.9 2.5E+02 0.0084 22.3 7.2 65 173-239 77-143 (155)
63 3v4k_A DNA DC->DU-editing enzy 22.3 2.4E+02 0.0081 25.2 7.3 101 157-278 98-202 (203)
64 3qk7_A Transcriptional regulat 21.7 3.9E+02 0.013 23.1 10.0 51 172-224 25-75 (294)
65 2q7s_A N-formylglutamate amido 21.0 62 0.0021 30.2 3.3 31 265-299 147-177 (290)
66 3lyh_A Cobalamin (vitamin B12) 20.7 46 0.0016 26.3 2.1 16 96-111 2-17 (126)
67 3e61_A Putative transcriptiona 20.6 2.5E+02 0.0087 23.8 7.2 50 171-222 22-72 (277)
68 2nu8_B SCS-beta, succinyl-COA 20.5 1.5E+02 0.0051 28.5 6.1 78 105-214 287-365 (388)
No 1
>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A*
Probab=100.00 E-value=4.6e-69 Score=528.29 Aligned_cols=235 Identities=39% Similarity=0.661 Sum_probs=218.5
Q ss_pred CCceEEEEEccCCCCCcCcHHHHHHhhcCCCCcccCChhhhhhhhHHHHHHHhccchhhHHhhcccCCCCchhHHHHHHH
Q 019457 97 EDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQA 176 (340)
Q Consensus 97 ~~k~aVLLlNlG~P~s~~dV~~FL~~~l~D~~VI~lP~~~~~~~~~L~~lI~~~R~~ksa~~Y~~IGggSPL~~~T~~Qa 176 (340)
++|+||||||||||++++||++||+|||+||+||++|. +++|+++|+++|++|++++|+.|||||||+.+|++|+
T Consensus 2 ~~k~gVLL~nlG~P~~~~~V~~fL~~~~~d~~Vi~~P~-----~~~L~~~I~~~R~~k~~~~Y~~igggSPL~~~t~~Q~ 76 (359)
T 3hcn_A 2 KPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPI-----QNKLAPFIAKRRTPKIQEQYRRIGGGSPIKIWTSKQG 76 (359)
T ss_dssp CCCEEEEEEECCCCSSGGGHHHHHHHHHTCTTTCCCTT-----HHHHHHHHHHHHHHHHHHHHHHTTSSCCHHHHHHHHH
T ss_pred CCceEEEEEeCCCCCCHHHHHHHHHHHccCCcccccch-----HHHHhHHhcccchHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 56899999999999999999999999999999999983 5689999999999999999999999999999999999
Q ss_pred HHHHHHHHhcC---CCceeEeeeeccCCCHHHHHHHHHHcCCCEEEEEecCCCccccchHHHHHHHHHHHHhhccCCCCC
Q 019457 177 QALKTALEAKN---LPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLP 253 (340)
Q Consensus 177 ~~L~~~L~~~g---~~~~V~~aMrY~~P~i~eal~~l~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~~~~~~~~~~~~ 253 (340)
++|++.|++.+ .+++|++|||||+|+|+|+|++|+++|+++||+||||||||.+||||+++.+.+.+++....+.++
T Consensus 77 ~~L~~~L~~~~~~~~~~~V~~amry~~P~i~~~l~~l~~~G~~~ivvlPlyPqyS~~Ttgs~~~~~~~~~~~~~~~~~~~ 156 (359)
T 3hcn_A 77 EGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMK 156 (359)
T ss_dssp HHHHHHHHHHCGGGCSEEEEEEESSSSSBHHHHHHHHHHTTCSEEEEEESCSSCCTTTHHHHHHHHHHHHHHTTCCCSSE
T ss_pred HHHHHHHhhhcccccCceEEEEEeeCCCCHHHHHHHHHhcCCCeEEEEECCccccccchhhHHHHHHHHHHHhccCCCCc
Confidence 99999998754 468999999999999999999999999999999999999999999999999999988765555567
Q ss_pred EEEecCCCCChHHHHHHHHHHHHHHhhcCCC--CceEEEEEecCCchhhhccCCCchHHHHHHHHHHHHHHhhccCCCCC
Q 019457 254 VSIIRSWYQREGYVNSMADLIQKELGKFQKP--EEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINND 331 (340)
Q Consensus 254 v~~I~~~~~~p~yI~a~a~~I~~~L~~~~~~--~~~~LlFSaHglP~~~ie~~GDpY~~q~~~T~~~Iae~L~~~gl~~~ 331 (340)
+++|++||+||+||+|++++|++++++++.+ ++++|||||||||+++++ +||||.+||++|+++|+++| |+.++
T Consensus 157 ~~~i~~~~~~p~yI~a~a~~I~~~l~~~~~~~~~~~~LlfSaHgiP~~~~~-~GDpY~~q~~~t~~lv~e~L---g~~~~ 232 (359)
T 3hcn_A 157 WSTIDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVN-RGDPYPQEVSATVQKVMERL---EYCNP 232 (359)
T ss_dssp EEEECCCTTCHHHHHHHHHHHHHHHTTSCTTTGGGCEEEEEEECCBHHHHT-TTCSHHHHHHHHHHHHHHHT---TTCSC
T ss_pred eEEeCCccCCHHHHHHHHHHHHHHHHhCCccccCCcEEEEEcCCChHhhcc-cCCCHHHHHHHHHHHHHHHc---CCCCC
Confidence 9999999999999999999999999987642 457899999999999996 69999999999999999999 77667
Q ss_pred eEEEEecCC
Q 019457 332 HTLAYQVWF 340 (340)
Q Consensus 332 ~~layQSrf 340 (340)
|.++|||||
T Consensus 233 ~~l~~QSr~ 241 (359)
T 3hcn_A 233 YRLVWQSKV 241 (359)
T ss_dssp EEEEEECCS
T ss_pred EEEEEEcCC
Confidence 999999997
No 2
>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A
Probab=100.00 E-value=2.4e-67 Score=516.74 Aligned_cols=238 Identities=35% Similarity=0.627 Sum_probs=220.4
Q ss_pred CCCceEEEEEccCCCCCcCcHHHHHHhhcCCCCcccCChhhhhhhhHHHHHHHhccchhhHHhhcccCCCCchhHHHHHH
Q 019457 96 AEDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQ 175 (340)
Q Consensus 96 ~~~k~aVLLlNlG~P~s~~dV~~FL~~~l~D~~VI~lP~~~~~~~~~L~~lI~~~R~~ksa~~Y~~IGggSPL~~~T~~Q 175 (340)
+++|+||||||||||++++||++||+|||+||+||++|++ +|++|+++|+++|++|++++|+.|||||||+.+|++|
T Consensus 4 ~~~k~gvLL~nlG~P~~~~~V~~fL~~~~~d~~vi~~p~~---~~~~l~~~I~~~R~~k~~~~Y~~ig~gSPL~~~t~~q 80 (362)
T 1lbq_A 4 KRSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAK---YQKTIAKYIAKFRTPKIEKQYREIGGGSPIRKWSEYQ 80 (362)
T ss_dssp -CCCEEEEEEECCCCSSGGGHHHHHHHHTTCCSSSCCCSS---SHHHHHHHHHHHHHHHHHHHHHHTTSSCSHHHHHHHH
T ss_pred CCCceEEEEEECCCCCCHHHHHHHHHHhccCCccccCCHH---HHHHHhhhcCccchHHHHHHHHHcCCCCccHHHHHHH
Confidence 5678999999999999999999999999999999999986 3568999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcC---CCceeEeeeeccCCCHHHHHHHHHHcCCCEEEEEecCCCccccchHHHHHHHHHHHHhhccCCCC
Q 019457 176 AQALKTALEAKN---LPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRL 252 (340)
Q Consensus 176 a~~L~~~L~~~g---~~~~V~~aMrY~~P~i~eal~~l~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~~~~~~~~~~~ 252 (340)
+++|++.|++.+ .+++|++|||||+|+|+|+|++|+++|+++|++||||||||.+|||++.+.+.+++.+....+.+
T Consensus 81 ~~~L~~~L~~~~~~~~~~~V~~amry~~P~i~d~l~~l~~~G~~~ivvlPlyPqyS~~ttgs~~~~i~~~l~~~~~~~~i 160 (362)
T 1lbq_A 81 ATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKDGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSI 160 (362)
T ss_dssp HHHHHHHHHHHCGGGCCEEEEEEESSSSSCHHHHHHHHHTTTCCEEEEEESCSSCCTTTHHHHHHHHHHHHHHHCTTCCS
T ss_pred HHHHHHHHHhhcccCCCceEEeecccCCCCHHHHHHHHHHcCCCeEEEEecchhccccchhHHHHHHHHHHHhcccCCCc
Confidence 999999998643 47899999999999999999999999999999999999999999999999999998877655666
Q ss_pred CEEEecCCCCChHHHHHHHHHHHHHHhhcCCC--CceEEEEEecCCchhhhccCCCchHHHHHHHHHHHHHHhhccCCCC
Q 019457 253 PVSIIRSWYQREGYVNSMADLIQKELGKFQKP--EEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINN 330 (340)
Q Consensus 253 ~v~~I~~~~~~p~yI~a~a~~I~~~L~~~~~~--~~~~LlFSaHglP~~~ie~~GDpY~~q~~~T~~~Iae~L~~~gl~~ 330 (340)
.+++|++||+||+||+|++++|++++++++.+ ++++|||||||||+++++ +||||.+||++|+++|+++| |++.
T Consensus 161 ~i~~i~~~~~~p~~I~ala~~I~~~l~~~~~~~~~~~~llfSaHglP~~~~~-~GDpY~~q~~~ta~ll~e~l---g~~~ 236 (362)
T 1lbq_A 161 SWSVIDRWPTNEGLIKAFSENITKKLQEFPQPVRDKVVLLFSAHSLPMDVVN-TGDAYPAEVAATVYNIMQKL---KFKN 236 (362)
T ss_dssp EEEEECCCTTCHHHHHHHHHHHHHHHHTSCSTTGGGCEEEEEEECCBHHHHT-TTCSHHHHHHHHHHHHHHHT---TTCS
T ss_pred eEEEecCCCCCHHHHHHHHHHHHHHHHhcCcccCCCeEEEEecCCCcccccc-CCCcHHHHHHHHHHHHHHHc---CCCC
Confidence 77899999999999999999999999887543 567999999999999996 69999999999999999999 6645
Q ss_pred CeEEEEecCC
Q 019457 331 DHTLAYQVWF 340 (340)
Q Consensus 331 ~~~layQSrf 340 (340)
+|.++|||||
T Consensus 237 ~~~~~fQSr~ 246 (362)
T 1lbq_A 237 PYRLVWQSQV 246 (362)
T ss_dssp CEEEEEECCC
T ss_pred CEEEEEECCC
Confidence 7999999997
No 3
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A
Probab=100.00 E-value=3.2e-58 Score=442.90 Aligned_cols=218 Identities=28% Similarity=0.466 Sum_probs=198.8
Q ss_pred CCCceEEEEEccCCCCCcCcHHHHHHhhcCCCCcccCChhhhhhhhHHHHHHHhccchhhHHhhcccCCCCchhHHHHHH
Q 019457 96 AEDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQ 175 (340)
Q Consensus 96 ~~~k~aVLLlNlG~P~s~~dV~~FL~~~l~D~~VI~lP~~~~~~~~~L~~lI~~~R~~ksa~~Y~~IGggSPL~~~T~~Q 175 (340)
+++|+||||||||||++++||++||+|+|+|+.| | ..|+++++++|+.|||||||+.+|++|
T Consensus 2 ~~~~~~vLl~n~G~P~~~~~v~~fL~~~~~~~~~---~---------------~~r~~~~~~~Y~~ig~gSPl~~~t~~q 63 (310)
T 2h1v_A 2 SRKKMGLLVMAYGTPYKEEDIERYYTHIRRGRKP---E---------------PEMLQDLKDRYEAIGGISPLAQITEQQ 63 (310)
T ss_dssp CCEEEEEEEEECCCCSSGGGHHHHHHHHTTTCCC---C---------------HHHHHHHHHHHHHTTCSHHHHHHHHHH
T ss_pred CCCCeEEEEEeCCCCCChHHHHHHHHHHhcCCCC---C---------------hHHHHHHHHHHHHCCCCChhHHHHHHH
Confidence 3568999999999999999999999999998642 4 235788899999999999999999999
Q ss_pred HHHHHHHHHhcCC--CceeEeeeeccCCCHHHHHHHHHHcCCCEEEEEecCCCccccchHHHHHHHHHHHHhhccCCCCC
Q 019457 176 AQALKTALEAKNL--PVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLP 253 (340)
Q Consensus 176 a~~L~~~L~~~g~--~~~V~~aMrY~~P~i~eal~~l~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~~~~~~~~~~~~ 253 (340)
+++|++.|++.+. +++|++|||||+|+|+|+|++|+++|+++|+++|||||||.+|||++.+.+.+++.+.. .+.
T Consensus 64 ~~~L~~~L~~~~~~~~~~V~~amry~~P~i~~~l~~l~~~G~~~ivvlPl~pq~s~st~g~~~~~i~~~l~~~~---~~~ 140 (310)
T 2h1v_A 64 AHNLEQHLNEIQDEITFKAYIGLAHIEPFIEDAVAEMHKDGITEAVSIVLAPHFSTFSVQSYNKRAKEEAEKLG---GLT 140 (310)
T ss_dssp HHHHHHHHHHHCSSEEEEEEEEESSSSSBHHHHHHHHHHTTCCEEEEEESSSSCCTTTHHHHHHHHHHHHHHHC---SCE
T ss_pred HHHHHHHHHhcCCCCCceEeehhcCCCCCHHHHHHHHHhcCCCEEEEEECccchhhhhHHHHHHHHHHHHHhCC---CCe
Confidence 9999999987664 79999999999999999999999999999999999999999999999999999887754 367
Q ss_pred EEEecCCCCChHHHHHHHHHHHHHHhhcCC--CCceEEEEEecCCchhhhccCCCchHHHHHHHHHHHHHHhhccCCCCC
Q 019457 254 VSIIRSWYQREGYVNSMADLIQKELGKFQK--PEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINND 331 (340)
Q Consensus 254 v~~I~~~~~~p~yI~a~a~~I~~~L~~~~~--~~~~~LlFSaHglP~~~ie~~GDpY~~q~~~T~~~Iae~L~~~gl~~~ 331 (340)
+++|++||+||.||+|++++|++++++++. +++.+|||||||+|+++++ +||||.+||++|+++|+++| |+ .+
T Consensus 141 i~~i~~~~~~p~~i~a~a~~i~~~l~~~~~~~~~~~~llfs~HG~P~~~~~-~gDpY~~~~~~t~~~l~e~l---~~-~~ 215 (310)
T 2h1v_A 141 ITSVESWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSAHSLPEKIKE-FGDPYPDQLHESAKLIAEGA---GV-SE 215 (310)
T ss_dssp EEECCCCTTCHHHHHHHHHHHHHHHHHSCHHHHTSEEEEEEEECCBGGGGG-GTCCHHHHHHHHHHHHHHHH---TC-SC
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHhcccccCCCceEEEecCCCchhhcc-CCCChHHHHHHHHHHHHHHc---CC-CC
Confidence 999999999999999999999999987753 3567999999999999996 69999999999999999999 65 58
Q ss_pred eEEEEecC
Q 019457 332 HTLAYQVW 339 (340)
Q Consensus 332 ~~layQSr 339 (340)
|.++||||
T Consensus 216 ~~~~fqSr 223 (310)
T 2h1v_A 216 YAVGWQSE 223 (310)
T ss_dssp EEEEEESC
T ss_pred EEEEEEcC
Confidence 99999997
No 4
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=99.67 E-value=5.3e-16 Score=144.72 Aligned_cols=127 Identities=17% Similarity=0.156 Sum_probs=95.3
Q ss_pred HHHHHHHhcCCCceeEeeeec------------cCCCHHHHHHHHHHcCCCEEEEEecCCCccccchHHHHHHHHHH---
Q 019457 178 ALKTALEAKNLPVNVYVGMRY------------WYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNI--- 242 (340)
Q Consensus 178 ~L~~~L~~~g~~~~V~~aMrY------------~~P~i~eal~~l~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~--- 242 (340)
++.+.|.+...+++|++||.+ ++|+++++|++|.++|+++|+++||||. +|+..+.+.+.
T Consensus 30 ~~~~~l~~~~~~~~V~~af~~~~i~~~l~~~~~~~P~i~~al~~l~~~G~~~ivV~Pl~l~-----~G~~~~di~~~~~~ 104 (269)
T 2xvy_A 30 KMGDRVRAAHPDIPVRWAYTAKMIRAKLRAEGIAAPSPAEALAGMAEEGFTHVAVQSLHTI-----PGEEFHGLLETAHA 104 (269)
T ss_dssp HHHHHHHHHCTTSCEEEEESCHHHHHHHHHTTCCCCCHHHHHHHHHHTTCCEEEEEECCSS-----SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCeEEeehhhHHHHHHHHHcCCCCCCHHHHHHHHHHCCCCEEEEEeceee-----ccHhHHHHHHHHHH
Confidence 333344443457899999997 8899999999999999999999999995 45567777776
Q ss_pred HHhhccCCCCCEEEecCCCCChHHHHHHHHHHHHHHhhcCCCCceEEEEEecCCchhhhccCCCchHHHHHHHHHHH
Q 019457 243 FREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLI 319 (340)
Q Consensus 243 ~~~~~~~~~~~v~~I~~~~~~p~yI~a~a~~I~~~L~~~~~~~~~~LlFSaHglP~~~ie~~GDpY~~q~~~T~~~I 319 (340)
+.+... .-+.++++++|++||.|+++++++|++++.... +++..|||++||+|. .||++..+ +++++
T Consensus 105 l~~~~~-~~~~i~~~~pl~~~p~~i~~la~~i~~~~~~~~-~~~~~lll~~HGs~~-----~~~~~~~~---~a~~l 171 (269)
T 2xvy_A 105 FQGLPK-GLTRVSVGLPLIGTTADAEAVAEALVASLPADR-KPGEPVVFMGHGTPH-----PADICYPG---LQYYL 171 (269)
T ss_dssp HTTCTT-SCSEEEEECCSSCSHHHHHHHHHHHHHHSCTTC-CTTCCEEEEECCCSS-----GGGGHHHH---HHHHH
T ss_pred HHHhhc-cCCeEEEeCCCCCCHHHHHHHHHHHHHhchhhc-cCCceEEEEECCCCh-----hhccHHHH---HHHHH
Confidence 443221 114699999999999999999999999986421 234579999999996 25554432 45555
No 5
>2jh3_A Ribosomal protein S2-related protein; CBIX, SAD phasing, structural genomics, chelatase super-family fold, 4Fe-4S iron-sulphur cluster; 1.9A {Deinococcus radiodurans}
Probab=99.53 E-value=7.9e-15 Score=148.48 Aligned_cols=155 Identities=17% Similarity=0.186 Sum_probs=123.1
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHhcCC-----CceeEeeeeccCCCHHHHHHHHHHcCCCEEEEEecCCCccccchHHHH
Q 019457 162 IGGGSPLRKITDEQAQALKTALEAKNL-----PVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSI 236 (340)
Q Consensus 162 IGggSPL~~~T~~Qa~~L~~~L~~~g~-----~~~V~~aMrY~~P~i~eal~~l~~~G~~~IvvlPLyPqYS~sTtgS~~ 236 (340)
+|.|||+...++++.++|++.|.+.+. ++.|++||..+.|+++++|++| |+++|+++|||++++..+..
T Consensus 9 VgHGSp~~~~a~~~i~~La~~l~~~~~~~~L~~~~V~~Afle~~PsI~eaL~~L---G~~rVvVvPLfl~~G~H~~~--- 82 (474)
T 2jh3_A 9 IGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPGLRQVLRTV---AYSDVTVVPVFLSEGYVTET--- 82 (474)
T ss_dssp EECCCSSCTHHHHHHHHHHHHHHHHHHTTCCSCSEEEEEESSSSSBTTTGGGGC---CBSEEEEEECCSCCSHHHHT---
T ss_pred EeCCCCCChhHHHHHHHHHHHHHHhCCccccCCCeEEEEEcCCCCCHHHHHHHc---CcCeEEEEEEehhccHhHHH---
Confidence 477899988999999999999977654 6899999888999999999999 99999999999998764443
Q ss_pred HHHHHHHHhhc-----------cCCCCCEEEecCCCCChHHHHHHHHHHHHHHhhcCCCCceEEEEEecCCchhhhccCC
Q 019457 237 RVLQNIFREDA-----------YLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAG 305 (340)
Q Consensus 237 ~~l~~~~~~~~-----------~~~~~~v~~I~~~~~~p~yI~a~a~~I~~~L~~~~~~~~~~LlFSaHglP~~~ie~~G 305 (340)
.+.+.+.+.. ..+.+.++++++|++||.|+++++++|+++++.-..+++..|||.+
T Consensus 83 -DIp~~l~~~~~~~dsw~~~~~~~p~~~I~~~~pLG~~P~lie~la~rI~eal~~g~~~~~~avvlvg------------ 149 (474)
T 2jh3_A 83 -VLPRELGLGHQGPVPTGGVVRVLGGRRVRYTRPLGAHPGMADAIAAQARDTLPEGTDPADVTLLLLA------------ 149 (474)
T ss_dssp -HHHHHHTCCCCSCCCTTCEEEEETTEEEEECCCGGGSTTHHHHHHHHHHHHSCTTCCGGGCEEEEEE------------
T ss_pred -HHHHHHHHhhhccccchhhhhhcCCceEEEeCccCCCHHHHHHHHHHHHHHHhhccCcccceEEEec------------
Confidence 3444333221 1233568999999999999999999999998651123455677766
Q ss_pred Cc-hHHHHHHHHHHHHHHhhccCCCCCeEEEEecC
Q 019457 306 DP-YRDQMEECIYLIMQRLKDRGINNDHTLAYQVW 339 (340)
Q Consensus 306 Dp-Y~~q~~~T~~~Iae~L~~~gl~~~~~layQSr 339 (340)
|| |..+|++++++|++++ |+ .+|.++|||+
T Consensus 150 dp~a~~~~~~la~~L~e~l---g~-~~v~vaf~s~ 180 (474)
T 2jh3_A 150 ARPGNAALETHAQALRERG---QF-AGVEVVLESR 180 (474)
T ss_dssp SSTTCHHHHHHHHHHHHHC---CS-SEEEEEECCC
T ss_pred CchHHHHHHHHHHHHHHhc---CC-CcEEEEEEeC
Confidence 44 5689999999999997 55 3699999996
No 6
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*
Probab=99.33 E-value=1.8e-11 Score=114.41 Aligned_cols=129 Identities=10% Similarity=0.106 Sum_probs=98.5
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcCCCceeEeee-----------ecc--CCCHHHHHHHHHHcCCCEEEEEecCCCccc
Q 019457 163 GGGSPLRKITDEQAQALKTALEAKNLPVNVYVGM-----------RYW--YPFTEEAVQQIKRDRITRLVVLPLYPQFSI 229 (340)
Q Consensus 163 GggSPL~~~T~~Qa~~L~~~L~~~g~~~~V~~aM-----------rY~--~P~i~eal~~l~~~G~~~IvvlPLyPqYS~ 229 (340)
+-||...+..++..+++.+.+.+...+++|++|| ||+ .|+++++|++|.++|+++|+|+|||+
T Consensus 9 ~hGSr~~~~~~~~~~~~~~~v~~~~p~~~V~~af~s~~i~~~l~~~~g~~~psi~~aL~~l~~~G~~~vvV~Pl~l---- 84 (264)
T 2xwp_A 9 SFGTSYHDTCEKNIVACERDLAASCPDRDLFRAFTSGMIIRKLRQRDGIDIDTPLQALQKLAAQGYQDVAIQSLHI---- 84 (264)
T ss_dssp ECCCSCHHHHHHHHHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHCCCCCCHHHHHHHHHHHTCCEEEEEECCS----
T ss_pred ECCCCCHHHHHHHHHHHHHHHHHHCCCCeEEeehhhHHHHHHHHHhcCCCCCCHHHHHHHHHhCCCCEEEEEeCcc----
Confidence 5567666555535555666665555689999999 454 59999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHhhccCCCCCEEEecCCCCChHHHHHHHHHHHHHHhhcCCCCceEEEEEecCCchh
Q 019457 230 STTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVS 299 (340)
Q Consensus 230 sTtgS~~~~l~~~~~~~~~~~~~~v~~I~~~~~~p~yI~a~a~~I~~~L~~~~~~~~~~LlFSaHglP~~ 299 (340)
+.|...+++.+.+.+.... -..+++.+++..+|.+++++++.|.+.+... +++..|||++||.|..
T Consensus 85 -~~G~~~~di~~~v~~~~~~-~~~i~~~~pl~~~~~~~~~l~~~l~~~~~~~--~~~~~lvl~gHGs~~~ 150 (264)
T 2xwp_A 85 -INGDEYEKIVREVQLLRPL-FTRLTLGVPLLSSHNDYVQLMQALRQQMPSL--RQTEKVVFMGHGASHH 150 (264)
T ss_dssp -SSSHHHHHHHHHHHHHGGG-CSEEEEECCSSCSHHHHHHHHHHHHTTSCCC--CTTEEEEEEECCCSSG
T ss_pred -cCcHHHHHHHHHHHHHHhh-CCceEEecCCCCCHHHHHHHHHHHHHhcccc--CCCCeEEEEECCCCch
Confidence 3466667777766554322 1268899999999999999999998877543 2456899999999954
No 7
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=98.89 E-value=1.6e-08 Score=83.95 Aligned_cols=112 Identities=14% Similarity=0.187 Sum_probs=82.0
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHhcCCCceeEee-eeccCCCHHHHHHHHHHcCCCEEEEEecCCCccccchHHHHHHHH
Q 019457 162 IGGGSPLRKITDEQAQALKTALEAKNLPVNVYVG-MRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQ 240 (340)
Q Consensus 162 IGggSPL~~~T~~Qa~~L~~~L~~~g~~~~V~~a-MrY~~P~i~eal~~l~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~ 240 (340)
+|-||+-... .+..+++.+.|.+.. ..|+.| |.+..|.+++++++|.+.|+++|+++|+|.....-+....-..+.
T Consensus 11 v~HGS~~~~~-~~~~~~l~~~l~~~~--~~V~~a~le~~~P~l~~~l~~l~~~G~~~vvvvPlfl~~G~H~~~Dip~~~~ 87 (126)
T 3lyh_A 11 LAHGSSDARW-CETFEKLAEPTVESI--ENAAIAYMELAEPSLDTIVNRAKGQGVEQFTVVPLFLAAGRHLRKDVPAMIE 87 (126)
T ss_dssp EECCCSCHHH-HHHHHHHHHHHHHHS--TTCEEEESSSSSSBHHHHHHHHHHTTCCEEEEEECCSCCCHHHHHHHHHHHH
T ss_pred EeCCCCCHHH-HHHHHHHHHHHHhhc--CCEEEEEEeCCCCCHHHHHHHHHHcCCCEEEEEecccCCCchhhhHHHHHHH
Confidence 3667765433 335556666665554 468888 678999999999999999999999999999886444433333333
Q ss_pred HHHHhhccCCCCCEEEecCCCCChHHHHHHHHHHHHHHhh
Q 019457 241 NIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGK 280 (340)
Q Consensus 241 ~~~~~~~~~~~~~v~~I~~~~~~p~yI~a~a~~I~~~L~~ 280 (340)
++-.+. .+.+.+.+++..||.++++++++|++++..
T Consensus 88 ~~~~~~----~~~i~~~~~LG~~p~l~~~l~~ri~~al~~ 123 (126)
T 3lyh_A 88 RLEAEH----GVTIRLAEPIGKNPRLGLAIRDVVKEELER 123 (126)
T ss_dssp HHHHHH----TCEEEECCCGGGSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHh----CceEEEcCCCCCChHHHHHHHHHHHHHHhc
Confidence 322111 356888999999999999999999999864
No 8
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3
Probab=98.85 E-value=3.6e-09 Score=91.70 Aligned_cols=111 Identities=15% Similarity=0.172 Sum_probs=77.1
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcCCCceeEee-eec-cCCCHHHHHHHHHHcCCCEEEEEecCCCccccchHHHHHHHH
Q 019457 163 GGGSPLRKITDEQAQALKTALEAKNLPVNVYVG-MRY-WYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQ 240 (340)
Q Consensus 163 GggSPL~~~T~~Qa~~L~~~L~~~g~~~~V~~a-MrY-~~P~i~eal~~l~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~ 240 (340)
|-||+-.. ..+..+++.+.|.+......|++| |.| ..|.++++|++| |+++|+|+|||+++...++.. +.
T Consensus 31 ~HGS~~p~-~~~~~~~la~~l~~~~~~~~V~~afle~~~~Psl~~~l~~l---G~~~VvVvPlfL~~G~h~~~D----Ip 102 (156)
T 1tjn_A 31 GHGSQLNH-YREVMELHRKRIEESGAFDEVKIAFAARKRRPMPDEAIREM---NCDIIYVVPLFISYGLHVTED----LP 102 (156)
T ss_dssp ECCTTSTT-HHHHHHHHHHHHHHHTSSSEEEEEECSSSCSSCHHHHHHHC---CCSEEEEEECCSSCSHHHHTH----HH
T ss_pred ECCCCCHH-HHHHHHHHHHHHHhhCCCCeEEEEEecCCCCCCHHHHHHHc---CCCEEEEEechhcCCchhHhH----HH
Confidence 55665432 223334444444443345789999 888 999999999999 999999999999997655543 33
Q ss_pred HHHHhhc-------cCCCCCEEEecCCCCChHHHHHHHHHHHHHHhhc
Q 019457 241 NIFREDA-------YLSRLPVSIIRSWYQREGYVNSMADLIQKELGKF 281 (340)
Q Consensus 241 ~~~~~~~-------~~~~~~v~~I~~~~~~p~yI~a~a~~I~~~L~~~ 281 (340)
+.+.+.. ..+.+.+.+.+++..+|.++++++++|+++++..
T Consensus 103 ~~l~~~~~~~sw~~~~~~~~i~~~~pLG~~p~l~~~l~~ri~ea~~~~ 150 (156)
T 1tjn_A 103 DLLGFPRGRGIKEGEFEGKKVVICEPIGEDYFVTYAILNSVFRIGRDG 150 (156)
T ss_dssp HHHTCCCSSSCEEEEETTEEEEECCCSTTCHHHHHHHHHHHHCCC---
T ss_pred HHHHHHHhcccccccCCCceEEEeCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 3332211 1234567889999999999999999999887543
No 9
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A
Probab=98.83 E-value=1.2e-08 Score=84.81 Aligned_cols=110 Identities=15% Similarity=0.179 Sum_probs=78.8
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcCCCceeEee-eec-cCCCHHHHHHHHHHcCCCEEEEEecCCCccccchHHHHHHHH
Q 019457 163 GGGSPLRKITDEQAQALKTALEAKNLPVNVYVG-MRY-WYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQ 240 (340)
Q Consensus 163 GggSPL~~~T~~Qa~~L~~~L~~~g~~~~V~~a-MrY-~~P~i~eal~~l~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~ 240 (340)
|-||+-.. ..+..+++.+.|.+......|++| |.| ..|.++++|++| |+++|+++|||+++..-+.. ++.
T Consensus 10 ~HGS~~~~-~~~~~~~la~~l~~~~~~~~V~~a~le~~~~Psl~~~l~~l---g~~~v~v~Plfl~~G~h~~~----di~ 81 (133)
T 2xws_A 10 GHGSQLNH-YREVMELHRKRIEESGAFDEVKIAFAARKRRPMPDEAIREM---NCDIIYVVPLFISYGLHVTE----DLP 81 (133)
T ss_dssp ECSCCCHH-HHHHHHHHHHHHHHHTSSSEEEEEESSTTCSSCHHHHHHHC---CCSEEEEEECCSSCCHHHHT----HHH
T ss_pred ECCCCCHH-HHHHHHHHHHHHHhhCCCCcEEeeeeecCCCCCHHHHHHHc---CCCEEEEEeeeeCCCcchHh----HHH
Confidence 55676433 333455566666555446789999 777 999999999999 99999999999998655443 333
Q ss_pred HHHHhhc-------cCCCCCEEEecCCCCChHHHHHHHHHHHHHHhh
Q 019457 241 NIFREDA-------YLSRLPVSIIRSWYQREGYVNSMADLIQKELGK 280 (340)
Q Consensus 241 ~~~~~~~-------~~~~~~v~~I~~~~~~p~yI~a~a~~I~~~L~~ 280 (340)
+.+.+.. ..+.+.+.+.+++..+|.++++++++|+++++.
T Consensus 82 ~~~~~~~~~~s~~~~~~~~~i~~~~pLg~~p~~~~~l~~ri~~a~~~ 128 (133)
T 2xws_A 82 DLLGFPRGRGIKEGEFEGKKVVICEPIGEDYFVTYAILNSVFRIGRD 128 (133)
T ss_dssp HHHTCCCSSSCEEEEETTEEEEECCCSTTSHHHHHHHHHHHHCCC--
T ss_pred HHHHHhhccccccccCCCceEEEcCCCCCCHHHHHHHHHHHHHhhcC
Confidence 3333211 123356788999999999999999999887643
No 10
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*
Probab=97.82 E-value=0.00013 Score=67.86 Aligned_cols=104 Identities=14% Similarity=0.220 Sum_probs=75.6
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcCCCceeEeeeeccCCCHHHHHHHHHHcCCCEEEEEecCCCccccchHHHH-HH---
Q 019457 163 GGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSI-RV--- 238 (340)
Q Consensus 163 GggSPL~~~T~~Qa~~L~~~L~~~g~~~~V~~aMrY~~P~i~eal~~l~~~G~~~IvvlPLyPqYS~sTtgS~~-~~--- 238 (340)
|-|||-. .....++++..|.+.+ . .|++|+--|.|+++++++++.+.|+++|+++|++=.- |-.. ++
T Consensus 144 gHGs~~~--~~~~~~~~a~~l~~~~-~-~v~~g~~e~~P~~~~~l~~l~~~G~~~v~v~P~~l~a-----G~h~~~Di~~ 214 (264)
T 2xwp_A 144 GHGASHH--AFAAYACLDHMMTAQR-F-PARVGAVESYPEVDILIDSLRDEGVTGVHLMPLMLVA-----GDHAINDMAS 214 (264)
T ss_dssp ECCCSSG--GGHHHHHHHHHHHHTT-C-SEEEEESSSSSCHHHHHHHHHHHTCCEEEEEECSSCC-----CHHHHHHHHS
T ss_pred ECCCCch--hhHHHHHHHHHHHhhC-C-CEEEEEeCCCCCHHHHHHHHHHCCCCEEEEEeeeccc-----Ccchhhhccc
Confidence 7778765 2334556666776665 2 8899988889999999999999999999999996542 2222 21
Q ss_pred -----HHHHHHhhccCCCCCEE-EecCCCCChHHHHHHHHHHHHHHh
Q 019457 239 -----LQNIFREDAYLSRLPVS-IIRSWYQREGYVNSMADLIQKELG 279 (340)
Q Consensus 239 -----l~~~~~~~~~~~~~~v~-~I~~~~~~p~yI~a~a~~I~~~L~ 279 (340)
+.+.+.+. ...+. .+++..+||.+++++++++++++.
T Consensus 215 ~~~d~~~~~~~~~----g~~~~~~~~~LG~~p~i~~~~~~r~~ea~~ 257 (264)
T 2xwp_A 215 DDGDSWKMRFNAA----GIPATPWLSGLGENPAIRAMFVAHLHQALN 257 (264)
T ss_dssp SSTTSHHHHHHHT----TCCEEECCCCGGGCHHHHHHHHHHHHHHHC
T ss_pred cchhHHHHHHHHc----CCeEEEeccCCCCCHHHHHHHHHHHHHHHh
Confidence 22333332 22343 468899999999999999999985
No 11
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A
Probab=97.53 E-value=0.00033 Score=66.82 Aligned_cols=104 Identities=13% Similarity=0.147 Sum_probs=72.4
Q ss_pred CchhHHHHHHHHHHHHHHHhcCCCceeEeeeec--------cCCCHHHHHHHHHHc-CCCEEEEEecCCCccccchHHHH
Q 019457 166 SPLRKITDEQAQALKTALEAKNLPVNVYVGMRY--------WYPFTEEAVQQIKRD-RITRLVVLPLYPQFSISTTGSSI 236 (340)
Q Consensus 166 SPL~~~T~~Qa~~L~~~L~~~g~~~~V~~aMrY--------~~P~i~eal~~l~~~-G~~~IvvlPLyPqYS~sTtgS~~ 236 (340)
.|-+...++-++.|.+.|.- -.+.+++.- ..|+++++|++|.+. |+++|+|+|.. |.+-...+..
T Consensus 194 DpY~~~~~~t~~~l~e~l~~----~~~~~~fqSrg~g~~~Wl~P~~~~~l~~l~~~~G~k~v~V~P~~--F~sD~lEtl~ 267 (310)
T 2h1v_A 194 DPYPDQLHESAKLIAEGAGV----SEYAVGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQAFVYVPVG--FVADHLEVLY 267 (310)
T ss_dssp CCHHHHHHHHHHHHHHHHTC----SCEEEEEESCCCCSSCBSSCBHHHHHHHHHHHHCCSEEEEECTT--CCSSCHHHHT
T ss_pred CChHHHHHHHHHHHHHHcCC----CCEEEEEEcCCCCCCCcCCCCHHHHHHHHHHHcCCceEEEECCc--ccccceeeHH
Confidence 45566666777777777742 245555533 589999999999999 99999999952 4333333221
Q ss_pred H---HHHHHHHhhccCCCCCEEEecCCCCChHHHHHHHHHHHHHHh
Q 019457 237 R---VLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELG 279 (340)
Q Consensus 237 ~---~l~~~~~~~~~~~~~~v~~I~~~~~~p~yI~a~a~~I~~~L~ 279 (340)
+ ...+.+.+. ...+..++...+||.||+++++.|++.++
T Consensus 268 ei~~e~~e~~~~~----G~~~~~~p~ln~~p~~i~~l~~~v~~~l~ 309 (310)
T 2h1v_A 268 DNDYECKVVTDDI----GASYYRPEMPNAKPEFIDALATVVLKKLG 309 (310)
T ss_dssp TTTTHHHHHHHHH----TCEEECCCCCTTCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHc----CCeEEECCCCCCCHHHHHHHHHHHHHHhc
Confidence 1 122333332 24688999999999999999999998764
No 12
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=97.53 E-value=0.00011 Score=67.91 Aligned_cols=105 Identities=14% Similarity=0.217 Sum_probs=72.4
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcCCCceeEeeeeccCCCHHHHHHHHHHcCCCEEEEEecCCCccccchHHHHH-----
Q 019457 163 GGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIR----- 237 (340)
Q Consensus 163 GggSPL~~~T~~Qa~~L~~~L~~~g~~~~V~~aMrY~~P~i~eal~~l~~~G~~~IvvlPLyPqYS~sTtgS~~~----- 237 (340)
|-|||.. .....+++.+.|.+.+ -.+|+|.--|.|+++++|++|.+.|+++|+++|++=.- |-..+
T Consensus 153 ~HGs~~~--~~~~~~~~a~~l~~~~--~~~~~g~~e~~P~~~~~l~~l~~~G~~~v~v~P~~l~~-----G~h~~~di~~ 223 (269)
T 2xvy_A 153 GHGTPHP--ADICYPGLQYYLWRLD--PDLLVGTVEGSPSFDNVMAELDVRKAKRVWLMPLMAVA-----GDHARNDMAG 223 (269)
T ss_dssp ECCCSSG--GGGHHHHHHHHHHTTC--TTEEEEESSSSSCHHHHHHHHHHHTCSEEEEEEESSSC-----CHHHHTTTTC
T ss_pred ECCCChh--hccHHHHHHHHHHhcC--CCEEEEEcCCCCCHHHHHHHHHHCCCCEEEEECCcccc-----ccchhhhcCC
Confidence 6778862 2223334566665544 45778865589999999999999999999999995331 11111
Q ss_pred ----HHHHHHHhhccCCCCCEE-EecCCCCChHHHHHHHHHHHHHHhh
Q 019457 238 ----VLQNIFREDAYLSRLPVS-IIRSWYQREGYVNSMADLIQKELGK 280 (340)
Q Consensus 238 ----~l~~~~~~~~~~~~~~v~-~I~~~~~~p~yI~a~a~~I~~~L~~ 280 (340)
.+.+.+.+. ...+. .+++..++|.++++++++++++++.
T Consensus 224 ~~~~~~~~~~~~~----g~~~~~~~~~Lg~~p~~~~~l~~~~~~a~~~ 267 (269)
T 2xvy_A 224 DEDDSWTSQLARR----GIEAKPVLHGTAESDAVAAIWLRHLDDALAR 267 (269)
T ss_dssp SSTTSHHHHHHHT----TCEEEECCCCGGGCHHHHHHHHHHHHHHHHT
T ss_pred CchhHHHHHHHHc----CcEEEEecCCCCCCHHHHHHHHHHHHHHHHh
Confidence 122333332 23444 7899999999999999999998864
No 13
>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A*
Probab=97.36 E-value=0.0011 Score=64.94 Aligned_cols=112 Identities=15% Similarity=0.207 Sum_probs=77.4
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcCCCceeEeeeecc-----CCCHHHHHHHHHHcCCCEEEEEecCCCccccchHHHHH
Q 019457 163 GGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYW-----YPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIR 237 (340)
Q Consensus 163 GggSPL~~~T~~Qa~~L~~~L~~~g~~~~V~~aMrY~-----~P~i~eal~~l~~~G~~~IvvlPLyPqYS~sTtgS~~~ 237 (340)
..|.|-....++-++.|.+.|.-. .++.+.+==|.| .|+++|+|++|.+.|+++|+++|. -|.+--..+..+
T Consensus 207 ~~GDpY~~q~~~t~~lv~e~Lg~~-~~~~l~~QSr~G~~~WL~P~t~d~l~~L~~~G~k~vvv~P~--gFvsD~lETL~E 283 (359)
T 3hcn_A 207 NRGDPYPQEVSATVQKVMERLEYC-NPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPI--AFTSDHIETLYE 283 (359)
T ss_dssp TTTCSHHHHHHHHHHHHHHHTTTC-SCEEEEEECCSCSSCBSSSBHHHHHHHHHHTTCCEEEEECT--TCCSCCCCCHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHcCCC-CCEEEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCeEEEECC--ccchhhHHhHHH
Confidence 346787777777888888877532 123333222234 799999999999999999999996 344333333333
Q ss_pred HH----HHHHHhhccCCCC-CEEEecCCCCChHHHHHHHHHHHHHHhhc
Q 019457 238 VL----QNIFREDAYLSRL-PVSIIRSWYQREGYVNSMADLIQKELGKF 281 (340)
Q Consensus 238 ~l----~~~~~~~~~~~~~-~v~~I~~~~~~p~yI~a~a~~I~~~L~~~ 281 (340)
.- .+.+.+. .+ .+..|+.--++|.||+++++.|.+.++..
T Consensus 284 id~E~~~e~a~e~----G~~~~~rip~LNd~p~fi~~La~lv~~~l~~~ 328 (359)
T 3hcn_A 284 LDIEYSQVLAKEC----GVENIRRAESLNGNPLFSKALADLVHSHIQSN 328 (359)
T ss_dssp HCHHHHHHHHHHT----CCCEEEECCCSTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhC----CCceEEEcCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 21 1223332 34 48899999999999999999999999763
No 14
>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A
Probab=97.22 E-value=0.00045 Score=67.57 Aligned_cols=111 Identities=14% Similarity=0.155 Sum_probs=74.3
Q ss_pred CCCchhHHHHHHHHHHHHHHHhcCCCceeEeeeecc-----CCCHHHHHHHHHHcCCCEEEEEecCCCccccchHHHHHH
Q 019457 164 GGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYW-----YPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRV 238 (340)
Q Consensus 164 ggSPL~~~T~~Qa~~L~~~L~~~g~~~~V~~aMrY~-----~P~i~eal~~l~~~G~~~IvvlPLyPqYS~sTtgS~~~~ 238 (340)
.|.|-....++-++.|.+.|.-. .++.+.+-=|.+ .|+++++|++| +.|+++|+|+|. -|++--..+..+
T Consensus 213 ~GDpY~~q~~~ta~ll~e~lg~~-~~~~~~fQSr~G~~~WL~P~t~~~l~~L-~~G~k~vvVvP~--gFvsD~lETL~e- 287 (362)
T 1lbq_A 213 TGDAYPAEVAATVYNIMQKLKFK-NPYRLVWQSQVGPKPWLGAQTAEIAEFL-GPKVDGLMFIPI--AFTSDHIETLHE- 287 (362)
T ss_dssp TTCSHHHHHHHHHHHHHHHTTTC-SCEEEEEECCCSSSCBCSCBHHHHHHHH-GGGCSCEEEECT--TCSSCCHHHHTC-
T ss_pred CCCcHHHHHHHHHHHHHHHcCCC-CCEEEEEECCCCCcccCCCCHHHHHHHH-HcCCCeEEEECC--eechhhHhhHHH-
Confidence 56787777777777777777521 134443333566 69999999999 999999999994 454433333211
Q ss_pred HHHHHHhhccCCCCCEEEecCCCCChHHHHHHHHHHHHHHhh
Q 019457 239 LQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGK 280 (340)
Q Consensus 239 l~~~~~~~~~~~~~~v~~I~~~~~~p~yI~a~a~~I~~~L~~ 280 (340)
+....++....... +..++...+||.||+++++.|++.++.
T Consensus 288 id~e~~e~~~~~G~-~~~~p~Ln~~p~fi~~L~~lv~~~l~~ 328 (362)
T 1lbq_A 288 IDLGVIGESEYKDK-FKRCESLNGNQTFIEGMADLVKSHLQS 328 (362)
T ss_dssp CCCCCCTTCTTGGG-EEECCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCC-EEEcCCCCCCHHHHHHHHHHHHHHhcc
Confidence 10001111111122 889999999999999999999999864
No 15
>2jh3_A Ribosomal protein S2-related protein; CBIX, SAD phasing, structural genomics, chelatase super-family fold, 4Fe-4S iron-sulphur cluster; 1.9A {Deinococcus radiodurans}
Probab=94.52 E-value=0.059 Score=54.42 Aligned_cols=100 Identities=14% Similarity=0.106 Sum_probs=63.5
Q ss_pred hHHHHHHHHHHHHHHHhcCCCceeEeeeeccCC-----------CHHHHHHHHHHcCCCEEEEEecCCCccccchHHHHH
Q 019457 169 RKITDEQAQALKTALEAKNLPVNVYVGMRYWYP-----------FTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIR 237 (340)
Q Consensus 169 ~~~T~~Qa~~L~~~L~~~g~~~~V~~aMrY~~P-----------~i~eal~~l~~~G~~~IvvlPLyPqYS~sTtgS~~~ 237 (340)
+...++.++.|++.+ | --.|++|+.-..| .+++++++| |+++|+++|+|-.- ..- ..+
T Consensus 154 ~~~~~~la~~L~e~l---g-~~~v~vaf~s~~Pwl~P~~~wleP~l~d~l~~L---G~krVvV~P~Fl~d---G~h-~~~ 222 (474)
T 2jh3_A 154 NAALETHAQALRERG---Q-FAGVEVVLESREALTPESHAASAVPLSEWPSRV---EAGQAVLVPFLTHL---GKH-AAE 222 (474)
T ss_dssp CHHHHHHHHHHHHHC---C-SSEEEEEECCCC---------CCEEGGGGGGGC---CSSCEEEEECSSCC---CHH-HHH
T ss_pred HHHHHHHHHHHHHhc---C-CCcEEEEEEeCCCCCCcccccccCCHHHHHHHc---CCCeEEEEEeeccC---Ccc-hHH
Confidence 334444444444433 2 1257777666677 999999988 99999999995442 111 122
Q ss_pred HHHHHHHhhc-cCC-CCCEEEecCCCCChHHHHHHHHHHHHHHh
Q 019457 238 VLQNIFREDA-YLS-RLPVSIIRSWYQREGYVNSMADLIQKELG 279 (340)
Q Consensus 238 ~l~~~~~~~~-~~~-~~~v~~I~~~~~~p~yI~a~a~~I~~~L~ 279 (340)
++....+... ..+ .+.+..++....||.++++++++|+++++
T Consensus 223 DI~~~~~~~~~~~p~G~~v~~~~~LG~~p~~~~ll~~rv~eal~ 266 (474)
T 2jh3_A 223 RLQQALAQAAERFPQAPPLHVGGPVGEHPAVAEVVLALAAEGRE 266 (474)
T ss_dssp HHHHHHHHHHHHCTTCCCEEECCCGGGSTTHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHhccCCcEEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 3333222111 112 46788999999999999999999988763
No 16
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=74.76 E-value=6.2 Score=35.42 Aligned_cols=35 Identities=26% Similarity=0.235 Sum_probs=26.7
Q ss_pred ceEEEEEccCCCC--CcCcHHHHHHhhcCCCCcccCChh
Q 019457 99 KVGVLLLNLGGPD--TLHDVQPFLFNLFADPDIIRLPRL 135 (340)
Q Consensus 99 k~aVLLlNlG~P~--s~~dV~~FL~~~l~D~~VI~lP~~ 135 (340)
..++ .|+|+|+ |..|+-..+.+.+.-|.++++|.|
T Consensus 211 ~~g~--yn~~~~~~~t~~e~~~~ia~~lgrp~~~pvP~~ 247 (298)
T 4b4o_A 211 VHGV--LNGVAPSSATNAEFAQTFGAALGRRAFIPLPSA 247 (298)
T ss_dssp CCEE--EEESCSCCCBHHHHHHHHHHHHTCCCCCCBCHH
T ss_pred CCCe--EEEECCCccCHHHHHHHHHHHhCcCCcccCCHH
Confidence 3564 5777776 667999999999987777888865
No 17
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=47.69 E-value=1.2e+02 Score=28.02 Aligned_cols=53 Identities=11% Similarity=0.019 Sum_probs=34.0
Q ss_pred CCceeEeeeeccCCCHHHHHHHH---HHcCCCEEEEEecCCCc---cccchHHHHHHHHHHHH
Q 019457 188 LPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQF---SISTTGSSIRVLQNIFR 244 (340)
Q Consensus 188 ~~~~V~~aMrY~~P~i~eal~~l---~~~G~~~IvvlPLyPqY---S~sTtgS~~~~l~~~~~ 244 (340)
..++|..|- +...++++++.. .+.|+|-++++| |.| ...|-...++.+....+
T Consensus 76 grvpviaGv--g~~~t~~ai~la~~A~~~Gadavlv~~--Pyy~~~~~~s~~~l~~~f~~va~ 134 (309)
T 3fkr_A 76 GRVPVIVTT--SHYSTQVCAARSLRAQQLGAAMVMAMP--PYHGATFRVPEAQIFEFYARVSD 134 (309)
T ss_dssp TSSCEEEEC--CCSSHHHHHHHHHHHHHTTCSEEEECC--SCBTTTBCCCHHHHHHHHHHHHH
T ss_pred CCCcEEEec--CCchHHHHHHHHHHHHHcCCCEEEEcC--CCCccCCCCCHHHHHHHHHHHHH
Confidence 467777764 678899988744 456999888877 666 33444444444444433
No 18
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=44.55 E-value=1.5e+02 Score=27.01 Aligned_cols=52 Identities=17% Similarity=0.190 Sum_probs=35.2
Q ss_pred CCceeEeeeeccCCCHHHHHHHHHH---cCCCEEEEEecCCCccccchHHHHHHHHHHH
Q 019457 188 LPVNVYVGMRYWYPFTEEAVQQIKR---DRITRLVVLPLYPQFSISTTGSSIRVLQNIF 243 (340)
Q Consensus 188 ~~~~V~~aMrY~~P~i~eal~~l~~---~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~~ 243 (340)
.+++|..|- +...++++++..+. .|+|-++++| |.|...|-...++.+....
T Consensus 69 gr~pviaGv--g~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~s~~~l~~~f~~ia 123 (292)
T 2ojp_A 69 GRIPVIAGT--GANATAEAISLTQRFNDSGIVGCLTVT--PYYNRPSQEGLYQHFKAIA 123 (292)
T ss_dssp TSSCEEEEC--CCSSHHHHHHHHHHTTTSSCSEEEEEC--CCSSCCCHHHHHHHHHHHH
T ss_pred CCCcEEEec--CCccHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHHH
Confidence 357777664 77889999886653 5999888876 6676666555555554443
No 19
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=43.85 E-value=1.9e+02 Score=26.39 Aligned_cols=53 Identities=19% Similarity=0.149 Sum_probs=35.7
Q ss_pred CCceeEeeeeccCCCHHHHHHHH---HHcCCCEEEEEecCCCccccchHHHHHHHHHHHH
Q 019457 188 LPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (340)
Q Consensus 188 ~~~~V~~aMrY~~P~i~eal~~l---~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~~~ 244 (340)
..++|..|- +...++++++.. .+.|+|-++++| |.|...|-...++.+....+
T Consensus 68 grvpviaGv--g~~~t~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~va~ 123 (294)
T 2ehh_A 68 GRIKVIAGT--GGNATHEAVHLTAHAKEVGADGALVVV--PYYNKPTQRGLYEHFKTVAQ 123 (294)
T ss_dssp TSSEEEEEC--CCSCHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCCcEEEec--CCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHHHH
Confidence 357777664 678899998754 456999888886 66766665555555555443
No 20
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=43.75 E-value=2e+02 Score=26.52 Aligned_cols=53 Identities=15% Similarity=0.140 Sum_probs=35.3
Q ss_pred CCceeEeeeeccCCCHHHHHHHH---HHcCCCEEEEEecCCCccccchHHHHHHHHHHHH
Q 019457 188 LPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (340)
Q Consensus 188 ~~~~V~~aMrY~~P~i~eal~~l---~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~~~ 244 (340)
..++|..|- +...++++++.. .+.|+|-++++| |.|...|-...++.+....+
T Consensus 84 grvpviaGv--g~~st~~ai~la~~A~~~Gadavlv~~--P~y~~~~~~~l~~~f~~ia~ 139 (304)
T 3cpr_A 84 DRAKLIAGV--GTNNTRTSVELAEAAASAGADGLLVVT--PYYSKPSQEGLLAHFGAIAA 139 (304)
T ss_dssp TTSEEEEEC--CCSCHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCCcEEecC--CCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHHHH
Confidence 357777663 678899998754 456999888886 56766565555555544433
No 21
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=43.38 E-value=1.9e+02 Score=26.76 Aligned_cols=53 Identities=19% Similarity=0.163 Sum_probs=34.9
Q ss_pred CCceeEeeeeccCCCHHHHHHHH---HHcCCCEEEEEecCCCccccchHHHHHHHHHHHH
Q 019457 188 LPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (340)
Q Consensus 188 ~~~~V~~aMrY~~P~i~eal~~l---~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~~~ 244 (340)
..++|..| -+...++++++.. .+.|+|-++++| |.|...|-...++.+....+
T Consensus 91 grvpViaG--vg~~st~eai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~va~ 146 (314)
T 3qze_A 91 GRIPVIAG--TGANSTREAVALTEAAKSGGADACLLVT--PYYNKPTQEGMYQHFRHIAE 146 (314)
T ss_dssp TSSCEEEE--CCCSSHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCCcEEEe--CCCcCHHHHHHHHHHHHHcCCCEEEEcC--CCCCCCCHHHHHHHHHHHHH
Confidence 35777765 4677899988754 457999888876 56666565555555554443
No 22
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=42.68 E-value=44 Score=28.10 Aligned_cols=106 Identities=13% Similarity=0.087 Sum_probs=59.6
Q ss_pred ceEEEEEccCCCCCcCcHHHHHHhhcC--CCCcccCChhhhhhhhHHHHHHHhccchhhHHhhcccCCCCchhHHHHHHH
Q 019457 99 KVGVLLLNLGGPDTLHDVQPFLFNLFA--DPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQA 176 (340)
Q Consensus 99 k~aVLLlNlG~P~s~~dV~~FL~~~l~--D~~VI~lP~~~~~~~~~L~~lI~~~R~~ksa~~Y~~IGggSPL~~~T~~Qa 176 (340)
+.-|||...|+ |..+==..++..+|. +=+|+.++.. -|...++...+ ......|| -|=+...+..+.
T Consensus 18 ~~~vlla~~~g-d~HdiG~~~va~~l~~~G~eVi~lG~~-----~p~e~lv~aa~----~~~~diV~-lS~~~~~~~~~~ 86 (161)
T 2yxb_A 18 RYKVLVAKMGL-DGHDRGAKVVARALRDAGFEVVYTGLR-----QTPEQVAMAAV----QEDVDVIG-VSILNGAHLHLM 86 (161)
T ss_dssp SCEEEEEEESS-SSCCHHHHHHHHHHHHTTCEEECCCSB-----CCHHHHHHHHH----HTTCSEEE-EEESSSCHHHHH
T ss_pred CCEEEEEeCCC-CccHHHHHHHHHHHHHCCCEEEECCCC-----CCHHHHHHHHH----hcCCCEEE-EEeechhhHHHH
Confidence 34588888887 533211234444443 3467766531 13455544332 23344454 244444555666
Q ss_pred HHHHHHHHhcCC-CceeEeeeeccCCCHHHHHHHHHHcCCCEEE
Q 019457 177 QALKTALEAKNL-PVNVYVGMRYWYPFTEEAVQQIKRDRITRLV 219 (340)
Q Consensus 177 ~~L~~~L~~~g~-~~~V~~aMrY~~P~i~eal~~l~~~G~~~Iv 219 (340)
..+-+.|.+.+. +++|.+| +.|..++ .+.+.+.|+|.++
T Consensus 87 ~~~i~~L~~~g~~~i~v~vG---G~~~~~~-~~~l~~~G~d~v~ 126 (161)
T 2yxb_A 87 KRLMAKLRELGADDIPVVLG---GTIPIPD-LEPLRSLGIREIF 126 (161)
T ss_dssp HHHHHHHHHTTCTTSCEEEE---ECCCHHH-HHHHHHTTCCEEE
T ss_pred HHHHHHHHhcCCCCCEEEEe---CCCchhc-HHHHHHCCCcEEE
Confidence 667777777663 6889988 6676555 3456778998543
No 23
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=42.46 E-value=1.9e+02 Score=26.32 Aligned_cols=53 Identities=17% Similarity=0.165 Sum_probs=35.8
Q ss_pred CCceeEeeeeccCCCHHHHHHHH---HHcCCCEEEEEecCCCccccchHHHHHHHHHHHH
Q 019457 188 LPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (340)
Q Consensus 188 ~~~~V~~aMrY~~P~i~eal~~l---~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~~~ 244 (340)
..++|..|- +...++++++.. .+.|+|-++++| |.|...|-...++.+.+..+
T Consensus 68 gr~pviaGv--g~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~s~~~l~~~f~~ia~ 123 (289)
T 2yxg_A 68 GRVQVIAGA--GSNCTEEAIELSVFAEDVGADAVLSIT--PYYNKPTQEGLRKHFGKVAE 123 (289)
T ss_dssp TSSEEEEEC--CCSSHHHHHHHHHHHHHHTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCCcEEEeC--CCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHHHH
Confidence 357777764 678899998754 456999888886 66766665555555555443
No 24
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=41.89 E-value=2e+02 Score=26.41 Aligned_cols=53 Identities=11% Similarity=0.157 Sum_probs=35.3
Q ss_pred CCceeEeeeeccCCCHHHHHHHH---HHcCCCEEEEEecCCCccccchHHHHHHHHHHHH
Q 019457 188 LPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (340)
Q Consensus 188 ~~~~V~~aMrY~~P~i~eal~~l---~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~~~ 244 (340)
.+++|..|- +...++++++.. .+.|+|-++++| |.|...|-...++.+....+
T Consensus 80 grvpViaGv--g~~~t~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~va~ 135 (301)
T 1xky_A 80 KRVPVIAGT--GSNNTHASIDLTKKATEVGVDAVMLVA--PYYNKPSQEGMYQHFKAIAE 135 (301)
T ss_dssp TSSCEEEEC--CCSCHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCceEEeCC--CCCCHHHHHHHHHHHHhcCCCEEEEcC--CCCCCCCHHHHHHHHHHHHH
Confidence 357777663 678899998754 456999888876 56766665555555544433
No 25
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=41.77 E-value=1.6e+02 Score=27.17 Aligned_cols=50 Identities=20% Similarity=0.257 Sum_probs=32.5
Q ss_pred CceeEeeeeccCCCHHHHHHHHH---HcCCCEEEEEecCCCccccchHHHHHHHHHH
Q 019457 189 PVNVYVGMRYWYPFTEEAVQQIK---RDRITRLVVLPLYPQFSISTTGSSIRVLQNI 242 (340)
Q Consensus 189 ~~~V~~aMrY~~P~i~eal~~l~---~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~ 242 (340)
+++|..|- +...++++++..+ +.|+|-++++| |.|...|-...++.+...
T Consensus 81 rvpViaGv--g~~st~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~v 133 (306)
T 1o5k_A 81 KIPVIVGA--GTNSTEKTLKLVKQAEKLGANGVLVVT--PYYNKPTQEGLYQHYKYI 133 (306)
T ss_dssp SSCEEEEC--CCSCHHHHHHHHHHHHHHTCSEEEEEC--CCSSCCCHHHHHHHHHHH
T ss_pred CCeEEEcC--CCccHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHH
Confidence 56777663 6778888887543 46999888776 556665555444444443
No 26
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=40.76 E-value=2.2e+02 Score=26.11 Aligned_cols=53 Identities=15% Similarity=0.108 Sum_probs=35.0
Q ss_pred CCceeEeeeeccCCCHHHHHHHH---HHcCCCEEEEEecCCCccccchHHHHHHHHHHHH
Q 019457 188 LPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (340)
Q Consensus 188 ~~~~V~~aMrY~~P~i~eal~~l---~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~~~ 244 (340)
..++|..| -+...++++++.. .+.|+|-++++| |.|...|-...++.+.+..+
T Consensus 75 grvpviaG--vg~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~~~~~l~~~f~~va~ 130 (297)
T 3flu_A 75 KRVPVIAG--TGANNTVEAIALSQAAEKAGADYTLSVV--PYYNKPSQEGIYQHFKTIAE 130 (297)
T ss_dssp TSSCEEEE--CCCSSHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCCcEEEe--CCCcCHHHHHHHHHHHHHcCCCEEEECC--CCCCCCCHHHHHHHHHHHHH
Confidence 35777776 4678899998854 457999888876 55665555545555544433
No 27
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=40.17 E-value=15 Score=27.16 Aligned_cols=47 Identities=17% Similarity=0.196 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHhcCCC---------ceeEeeeeccCCCHHHHHHHHHHcCCCEEE
Q 019457 173 DEQAQALKTALEAKNLP---------VNVYVGMRYWYPFTEEAVQQIKRDRITRLV 219 (340)
Q Consensus 173 ~~Qa~~L~~~L~~~g~~---------~~V~~aMrY~~P~i~eal~~l~~~G~~~Iv 219 (340)
++.|++|.+.|...|.+ ++|.+|-.-..--.+.+.++|++.|++..+
T Consensus 20 ~~~A~~l~~~L~~~G~~a~i~~~~~~yRV~vGpf~s~~~A~~~~~~L~~~g~~~~i 75 (81)
T 1uta_A 20 AEQAETVRAQLAFEGFDSKITTNNGWNRVVIGPVKGKENADSTLNRLKMAGHTNCI 75 (81)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECSSSEEEEESSCBTTTHHHHHHHHHHHHCCSCCB
T ss_pred HHHHHHHHHHHHhCCCCeEEEeCCcEEEEEECCcCCHHHHHHHHHHHHHcCCCcEE
Confidence 45667777777655532 344444222222233445555555555443
No 28
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=39.84 E-value=2.2e+02 Score=26.40 Aligned_cols=53 Identities=19% Similarity=0.194 Sum_probs=35.3
Q ss_pred CCceeEeeeeccCCCHHHHHHHH---HHcCCCEEEEEecCCCccccchHHHHHHHHHHHH
Q 019457 188 LPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (340)
Q Consensus 188 ~~~~V~~aMrY~~P~i~eal~~l---~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~~~ 244 (340)
..++|..| -+...++++++.. .+.|+|-++++| |.|...|-...++.+....+
T Consensus 90 grvpViaG--vg~~st~~ai~la~~A~~~Gadavlv~~--P~y~~~~~~~l~~~f~~va~ 145 (315)
T 3si9_A 90 KRVPVVAG--AGSNSTSEAVELAKHAEKAGADAVLVVT--PYYNRPNQRGLYTHFSSIAK 145 (315)
T ss_dssp TSSCBEEE--CCCSSHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCCcEEEe--CCCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHHHH
Confidence 35777766 4678899998754 457999888876 56666665555555554443
No 29
>3lub_A Putative creatinine amidohydrolase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Bacteroides fragilis}
Probab=39.63 E-value=58 Score=29.63 Aligned_cols=51 Identities=14% Similarity=0.184 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHhc-CCCceeEeeeeccC--------C------------CHHHHHHHHHHcCCCEEEEEec
Q 019457 173 DEQAQALKTALEAK-NLPVNVYVGMRYWY--------P------------FTEEAVQQIKRDRITRLVVLPL 223 (340)
Q Consensus 173 ~~Qa~~L~~~L~~~-g~~~~V~~aMrY~~--------P------------~i~eal~~l~~~G~~~IvvlPL 223 (340)
+..++++.+.|.++ +.++.|...+.|+. | .+.|.++.+.+.|++++|++.=
T Consensus 48 ~~ia~~~a~~l~~~~~~~~lv~P~i~yG~~s~~h~~fPGTisl~~~tl~~~l~di~~sl~~~G~rrlvivNg 119 (254)
T 3lub_A 48 HDIAVEAAELALSRSGVRCMVMPPVPFGAHNPGQRELPFCIHTRYATQQAILEDIVSSLHVQGFRKLLILSG 119 (254)
T ss_dssp HHHHHHHHHHHHHHHCCCEEECCCBCCBCCCTTTTTSTTCCBCCHHHHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred HHHHHHHHHhhhhhcCCCEEEeCCccccCCCccccCcCCeEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 34555555555443 34566666666665 2 1677888888999999999875
No 30
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=39.58 E-value=1.5e+02 Score=27.34 Aligned_cols=53 Identities=13% Similarity=0.055 Sum_probs=35.6
Q ss_pred CCceeEeeeeccCCCHHHHHHHH---HHcCCCEEEEEecCCCccccchHHHHHHHHHHHH
Q 019457 188 LPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (340)
Q Consensus 188 ~~~~V~~aMrY~~P~i~eal~~l---~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~~~ 244 (340)
.+++|..|- +...++++++.. .+.|+|-++++| |.|...|-...++.+....+
T Consensus 79 grvpViaGv--g~~~t~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~va~ 134 (303)
T 2wkj_A 79 GKIKLIAHV--GCVSTAESQQLAASAKRYGFDAVSAVT--PFYYPFSFEEHCDHYRAIID 134 (303)
T ss_dssp TTSEEEEEC--CCSSHHHHHHHHHHHHHHTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCCcEEEec--CCCCHHHHHHHHHHHHhCCCCEEEecC--CCCCCCCHHHHHHHHHHHHH
Confidence 367777764 677899998754 456999888886 56665565555555554443
No 31
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=38.93 E-value=1.6e+02 Score=26.88 Aligned_cols=53 Identities=13% Similarity=-0.011 Sum_probs=35.1
Q ss_pred CCceeEeeeeccCCCHHHHHHHHH---HcCCCEEEEEecCCCccccchHHHHHHHHHHHH
Q 019457 188 LPVNVYVGMRYWYPFTEEAVQQIK---RDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (340)
Q Consensus 188 ~~~~V~~aMrY~~P~i~eal~~l~---~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~~~ 244 (340)
.+++|..|- +...++++++..+ +.|+|-++++| |.|...|-...++.+....+
T Consensus 72 grvpviaGv--g~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~~~~~l~~~f~~va~ 127 (293)
T 1f6k_A 72 DQIALIAQV--GSVNLKEAVELGKYATELGYDCLSAVT--PFYYKFSFPEIKHYYDTIIA 127 (293)
T ss_dssp TSSEEEEEC--CCSCHHHHHHHHHHHHHHTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCCeEEEec--CCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHHHH
Confidence 367777764 7788999987543 46999888876 56766565555554444433
No 32
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=37.90 E-value=2.2e+02 Score=26.86 Aligned_cols=52 Identities=17% Similarity=0.231 Sum_probs=34.2
Q ss_pred CCceeEeeeeccCCCHHHHHHHH---HHcCCCEEEEEecCCCccccchHHHHHHHHHHH
Q 019457 188 LPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIF 243 (340)
Q Consensus 188 ~~~~V~~aMrY~~P~i~eal~~l---~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~~ 243 (340)
.+++|..| -+...++++++.. .+.|+|-++++| |.|...|-...++.+..+.
T Consensus 99 grvpViaG--vg~~st~eai~la~~A~~~Gadavlv~~--P~Y~~~s~~~l~~~f~~VA 153 (343)
T 2v9d_A 99 RRVPVLIG--TGGTNARETIELSQHAQQAGADGIVVIN--PYYWKVSEANLIRYFEQVA 153 (343)
T ss_dssp TSSCEEEE--CCSSCHHHHHHHHHHHHHHTCSEEEEEC--CSSSCCCHHHHHHHHHHHH
T ss_pred CCCcEEEe--cCCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHHH
Confidence 35677766 3677899988754 346999888876 5676656555555554443
No 33
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=37.70 E-value=2.3e+02 Score=26.24 Aligned_cols=52 Identities=15% Similarity=0.204 Sum_probs=34.5
Q ss_pred CCceeEeeeeccCCCHHHHHHHH---HHcCCCEEEEEecCCCccccchHHHHHHHHHHHH
Q 019457 188 LPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (340)
Q Consensus 188 ~~~~V~~aMrY~~P~i~eal~~l---~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~~~ 244 (340)
.+++|..|- +. .++++++.. .+.|+|-++++| |.|...|-...++.+....+
T Consensus 80 grvpViaGv--g~-st~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~va~ 134 (314)
T 3d0c_A 80 GRATVVAGI--GY-SVDTAIELGKSAIDSGADCVMIHQ--PVHPYITDAGAVEYYRNIIE 134 (314)
T ss_dssp TSSEEEEEE--CS-SHHHHHHHHHHHHHTTCSEEEECC--CCCSCCCHHHHHHHHHHHHH
T ss_pred CCCeEEecC--Cc-CHHHHHHHHHHHHHcCCCEEEECC--CCCCCCCHHHHHHHHHHHHH
Confidence 367787775 56 899998754 456999887776 66766665555555554443
No 34
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=37.29 E-value=1.9e+02 Score=26.60 Aligned_cols=52 Identities=12% Similarity=0.101 Sum_probs=35.3
Q ss_pred CceeEeeeeccCCCHHHHHHHH---HHcCCCEEEEEecCCCccccchHHHHHHHHHHHH
Q 019457 189 PVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (340)
Q Consensus 189 ~~~V~~aMrY~~P~i~eal~~l---~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~~~ 244 (340)
.++|..|- +...++++++.. .+.|+|-++++| |.|...|-...++.+....+
T Consensus 69 rvpviaGv--g~~~t~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~va~ 123 (297)
T 2rfg_A 69 RVPVIAGA--GSNNPVEAVRYAQHAQQAGADAVLCVA--GYYNRPSQEGLYQHFKMVHD 123 (297)
T ss_dssp SSCBEEEC--CCSSHHHHHHHHHHHHHHTCSEEEECC--CTTTCCCHHHHHHHHHHHHH
T ss_pred CCeEEEcc--CCCCHHHHHHHHHHHHhcCCCEEEEcC--CCCCCCCHHHHHHHHHHHHH
Confidence 57777663 678899998754 456999887776 66766666555555555443
No 35
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=36.82 E-value=2.4e+02 Score=25.62 Aligned_cols=52 Identities=17% Similarity=0.204 Sum_probs=34.2
Q ss_pred CceeEeeeeccCCCHHHHHHHH---HHcCCCEEEEEecCCCccccchHHHHHHHHHHHH
Q 019457 189 PVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (340)
Q Consensus 189 ~~~V~~aMrY~~P~i~eal~~l---~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~~~ 244 (340)
+++|..|- +...++++++.. .+.|+|-++++| |.|...|-...++.+....+
T Consensus 69 r~pviaGv--g~~~t~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~ia~ 123 (292)
T 2vc6_A 69 RVPVIAGA--GSNSTAEAIAFVRHAQNAGADGVLIVS--PYYNKPTQEGIYQHFKAIDA 123 (292)
T ss_dssp SSCBEEEC--CCSSHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCcEEEec--CCccHHHHHHHHHHHHHcCCCEEEEcC--CCCCCCCHHHHHHHHHHHHH
Confidence 56777663 677889988754 456999888776 56666565555555544433
No 36
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=36.48 E-value=1.9e+02 Score=25.51 Aligned_cols=69 Identities=7% Similarity=0.031 Sum_probs=42.7
Q ss_pred hHHHHHHHHHHHHHHHhcCCCceeEeeeeccCCCHHHHHHHHHHcCCCEEEEEecCCCccccchHHHHHHHHHHH
Q 019457 169 RKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIF 243 (340)
Q Consensus 169 ~~~T~~Qa~~L~~~L~~~g~~~~V~~aMrY~~P~i~eal~~l~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~~ 243 (340)
...|..+++.+.+.|++.|.++.+.. -+...-+++..+++.+ .|.||+. +|-|-.+-.+..-..+++.+
T Consensus 42 ~s~n~~L~~~~~~~l~~~g~ev~~~d--L~~~~Dv~~~~~~l~~--aD~iv~~--~P~y~~~~p~~lK~~iD~v~ 110 (218)
T 3rpe_A 42 GALNLTLTNVAADFLRESGHQVKITT--VDQGYDIESEIENYLW--ADTIIYQ--MPAWWMGEPWILKKYIDEVF 110 (218)
T ss_dssp SHHHHHHHHHHHHHHHHTTCCEEEEE--GGGCCCHHHHHHHHHH--CSEEEEE--EECBTTBCCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHhhCCCEEEEEE--CCCccCHHHHHHHHHh--CCEEEEE--CChHhccCCHHHHHHHHHHH
Confidence 46889999999999988776554432 2345567777777775 4655543 45555555554444444443
No 37
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=36.37 E-value=1.8e+02 Score=23.93 Aligned_cols=23 Identities=13% Similarity=0.076 Sum_probs=19.0
Q ss_pred CCch--hHHHHHHHHHHHHHHHhcC
Q 019457 165 GSPL--RKITDEQAQALKTALEAKN 187 (340)
Q Consensus 165 gSPL--~~~T~~Qa~~L~~~L~~~g 187 (340)
+||- ...|+..++.+.+.|.+.|
T Consensus 9 ~S~~~~~s~t~~la~~~~~~l~~~g 33 (201)
T 1t5b_A 9 SSILAGYSQSGQLTDYFIEQWREKH 33 (201)
T ss_dssp CCSSGGGCHHHHHHHHHHHHHHHHC
T ss_pred eCCCCCCChHHHHHHHHHHHHHHhC
Confidence 4776 4799999999999998765
No 38
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=36.34 E-value=2.3e+02 Score=26.15 Aligned_cols=52 Identities=13% Similarity=0.096 Sum_probs=33.9
Q ss_pred CCCceeEeeeeccCCCHHHHHHHH---HHcCCCEEEEEecCCCccccchHHHHHHHHHH
Q 019457 187 NLPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNI 242 (340)
Q Consensus 187 g~~~~V~~aMrY~~P~i~eal~~l---~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~ 242 (340)
+.+++|..| -+...++++++.. .+.|+|-++++| |.|...|-...++.+.+.
T Consensus 82 ~grvpviaG--vg~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~s~~~l~~~f~~v 136 (304)
T 3l21_A 82 GDRARVIAG--AGTYDTAHSIRLAKACAAEGAHGLLVVT--PYYSKPPQRGLQAHFTAV 136 (304)
T ss_dssp TTTSEEEEE--CCCSCHHHHHHHHHHHHHHTCSEEEEEC--CCSSCCCHHHHHHHHHHH
T ss_pred CCCCeEEEe--CCCCCHHHHHHHHHHHHHcCCCEEEECC--CCCCCCCHHHHHHHHHHH
Confidence 346778777 4778899988754 356999888875 456555554444444443
No 39
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=35.13 E-value=2.3e+02 Score=26.51 Aligned_cols=53 Identities=15% Similarity=0.120 Sum_probs=35.6
Q ss_pred CCceeEeeeeccCCCHHHHHHHH---HHcCCCEEEEEecCCCccccchHHHHHHHHHHHH
Q 019457 188 LPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (340)
Q Consensus 188 ~~~~V~~aMrY~~P~i~eal~~l---~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~~~ 244 (340)
..++|..|- +...++++++.. .+.|+|-++++| |.|...|-...++.+....+
T Consensus 102 grvpViaGv--g~~st~eai~la~~A~~~Gadavlv~~--P~Y~~~s~~~l~~~f~~VA~ 157 (332)
T 2r8w_A 102 GRRTLMAGI--GALRTDEAVALAKDAEAAGADALLLAP--VSYTPLTQEEAYHHFAAVAG 157 (332)
T ss_dssp TSSEEEEEE--CCSSHHHHHHHHHHHHHHTCSEEEECC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCCcEEEec--CCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHHHH
Confidence 367777763 678899998754 446999887776 66766665555555555443
No 40
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=34.87 E-value=2e+02 Score=26.22 Aligned_cols=54 Identities=17% Similarity=0.206 Sum_probs=35.1
Q ss_pred CCCceeEeeeeccCCCHHHHHHHH---HHcCCCEEEEEecCCCccccchHHHHHHHHHHHH
Q 019457 187 NLPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (340)
Q Consensus 187 g~~~~V~~aMrY~~P~i~eal~~l---~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~~~ 244 (340)
+.+++|..| -+...++++++.. .+.|+|-++++| |.|...|-...++.+....+
T Consensus 69 ~grvpviaG--vg~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~~~~~l~~~f~~ia~ 125 (292)
T 3daq_A 69 DKRVPVIAG--TGTNDTEKSIQASIQAKALGADAIMLIT--PYYNKTNQRGLVKHFEAIAD 125 (292)
T ss_dssp TTSSCEEEE--CCCSCHHHHHHHHHHHHHHTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCCCcEEEe--CCcccHHHHHHHHHHHHHcCCCEEEECC--CCCCCCCHHHHHHHHHHHHH
Confidence 346778776 4678899998854 456999888876 44555555544454444433
No 41
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=34.12 E-value=2.6e+02 Score=25.92 Aligned_cols=53 Identities=13% Similarity=0.060 Sum_probs=33.2
Q ss_pred CCceeEeeeeccCCCHHHHHHHH---HHcCCCEEEEEecCCCccccchHHHHHHHHHHHH
Q 019457 188 LPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (340)
Q Consensus 188 ~~~~V~~aMrY~~P~i~eal~~l---~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~~~ 244 (340)
..++|..| -+...++|+++.. .+.|+|-++++| |.|...|-...++.+.+..+
T Consensus 92 grvpViaG--vg~~~t~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~va~ 147 (315)
T 3na8_A 92 HRVPTIVS--VSDLTTAKTVRRAQFAESLGAEAVMVLP--ISYWKLNEAEVFQHYRAVGE 147 (315)
T ss_dssp TSSCBEEE--CCCSSHHHHHHHHHHHHHTTCSEEEECC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCCcEEEe--cCCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHHHH
Confidence 35667666 4677888888754 456999777754 56655555555555544443
No 42
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=33.24 E-value=39 Score=24.50 Aligned_cols=45 Identities=18% Similarity=0.161 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHhcCCC---------ceeEeeeeccCCCHHHHHHHHHHcCCCE
Q 019457 173 DEQAQALKTALEAKNLP---------VNVYVGMRYWYPFTEEAVQQIKRDRITR 217 (340)
Q Consensus 173 ~~Qa~~L~~~L~~~g~~---------~~V~~aMrY~~P~i~eal~~l~~~G~~~ 217 (340)
++.|+.+.+.|...|.+ ++|.+|---..--.++++++|+..|++-
T Consensus 20 ~~~A~~~~~~L~~~g~~~~i~~~~~~yRV~vGpf~~~~~A~~~~~~L~~~g~~~ 73 (79)
T 1x60_A 20 KANADSLASNAEAKGFDSIVLLKDGLYKVQIGAFSSKDNADTLAARAKNAGFDA 73 (79)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEETTEEEEEEEEESSHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHhCCCCeEEecCCcEEEEEECCcCCHHHHHHHHHHHHHcCCce
Confidence 45677777777655532 3455542112222334455566556643
No 43
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=32.82 E-value=2.9e+02 Score=25.27 Aligned_cols=52 Identities=21% Similarity=0.196 Sum_probs=34.6
Q ss_pred CceeEeeeeccCCCHHHHHHHH---HHcCCCEEEEEecCCCccccchHHHHHHHHHHHH
Q 019457 189 PVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (340)
Q Consensus 189 ~~~V~~aMrY~~P~i~eal~~l---~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~~~ 244 (340)
+++|..| -+...++++++.. .+.|+|-++++| |.|...|-...++.+.+..+
T Consensus 77 rvpviaG--vg~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~s~~~l~~~f~~va~ 131 (301)
T 3m5v_A 77 KVKVLAG--AGSNATHEAVGLAKFAKEHGADGILSVA--PYYNKPTQQGLYEHYKAIAQ 131 (301)
T ss_dssp SCEEEEE--CCCSSHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCeEEEe--CCCCCHHHHHHHHHHHHHcCCCEEEEcC--CCCCCCCHHHHHHHHHHHHH
Confidence 5777776 4678899998854 457999888875 55655555555555544443
No 44
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=32.57 E-value=2.5e+02 Score=24.39 Aligned_cols=14 Identities=14% Similarity=0.226 Sum_probs=7.5
Q ss_pred HHHHHHHHHHcCCC
Q 019457 203 TEEAVQQIKRDRIT 216 (340)
Q Consensus 203 i~eal~~l~~~G~~ 216 (340)
+.+.++++.+.|+-
T Consensus 75 ~~~~~~~~~~~giP 88 (297)
T 3rot_A 75 FSKSLQRANKLNIP 88 (297)
T ss_dssp THHHHHHHHHHTCC
T ss_pred HHHHHHHHHHCCCC
Confidence 34555555555554
No 45
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=31.75 E-value=1.3e+02 Score=27.85 Aligned_cols=57 Identities=19% Similarity=0.209 Sum_probs=35.2
Q ss_pred HHhcCCCceeEeeeeccCCCHHHHHHHH---HHcCCCEEEEEecCCCccccchHHHHHHHHHHHH
Q 019457 183 LEAKNLPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (340)
Q Consensus 183 L~~~g~~~~V~~aMrY~~P~i~eal~~l---~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~~~ 244 (340)
.+..+..++|..|- +. .++++++.. .+.|+|-++++| |.|...|-...++.+....+
T Consensus 75 v~~~~grvpViaGv--g~-~t~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~va~ 134 (316)
T 3e96_A 75 VEYVHGRALVVAGI--GY-ATSTAIELGNAAKAAGADAVMIHM--PIHPYVTAGGVYAYFRDIIE 134 (316)
T ss_dssp HHHHTTSSEEEEEE--CS-SHHHHHHHHHHHHHHTCSEEEECC--CCCSCCCHHHHHHHHHHHHH
T ss_pred HHHhCCCCcEEEEe--Cc-CHHHHHHHHHHHHhcCCCEEEEcC--CCCCCCCHHHHHHHHHHHHH
Confidence 33333468888886 45 899998854 456999888773 34544454545554544443
No 46
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=30.42 E-value=2.5e+02 Score=25.59 Aligned_cols=62 Identities=16% Similarity=0.283 Sum_probs=38.6
Q ss_pred HHHHHHhcCCCceeEeeeeccCCCHHHHHHHHH---HcCCCEEEEEecCCCccc-cchHHHHHHHHHHHH
Q 019457 179 LKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIK---RDRITRLVVLPLYPQFSI-STTGSSIRVLQNIFR 244 (340)
Q Consensus 179 L~~~L~~~g~~~~V~~aMrY~~P~i~eal~~l~---~~G~~~IvvlPLyPqYS~-sTtgS~~~~l~~~~~ 244 (340)
++...+..+.+++|..|- +...++++++..+ +.|+|-++++| |.|.. .|-...++.+....+
T Consensus 62 ~~~~~~~~~gr~pviaGv--g~~~t~~ai~la~~A~~~Gadavlv~~--P~y~~~~s~~~l~~~f~~va~ 127 (294)
T 3b4u_A 62 LSSFIAAGIAPSRIVTGV--LVDSIEDAADQSAEALNAGARNILLAP--PSYFKNVSDDGLFAWFSAVFS 127 (294)
T ss_dssp HHHHHHTTCCGGGEEEEE--CCSSHHHHHHHHHHHHHTTCSEEEECC--CCSSCSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCcEEEeC--CCccHHHHHHHHHHHHhcCCCEEEEcC--CcCCCCCCHHHHHHHHHHHHH
Confidence 333333333467777663 6778999987553 56999887775 66766 555555555555444
No 47
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=29.65 E-value=3.1e+02 Score=25.13 Aligned_cols=53 Identities=13% Similarity=0.053 Sum_probs=32.6
Q ss_pred CCceeEeeeeccCCCHHHHHHHH---HHcCCCEEEEEecCCCccccchHHHHHHHHHHHH
Q 019457 188 LPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (340)
Q Consensus 188 ~~~~V~~aMrY~~P~i~eal~~l---~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~~~ 244 (340)
..++|..| -+...++++++.. .+.|+|-++++| |.|...|-...++.+....+
T Consensus 72 grvpviaG--vg~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~~~~~l~~~f~~va~ 127 (300)
T 3eb2_A 72 RRVPVVAG--VASTSVADAVAQAKLYEKLGADGILAIL--EAYFPLKDAQIESYFRAIAD 127 (300)
T ss_dssp TSSCBEEE--EEESSHHHHHHHHHHHHHHTCSEEEEEE--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCCcEEEe--CCCCCHHHHHHHHHHHHHcCCCEEEEcC--CCCCCCCHHHHHHHHHHHHH
Confidence 35666665 3567788888754 456999888776 44555555555555544443
No 48
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=29.37 E-value=3.2e+02 Score=24.76 Aligned_cols=53 Identities=15% Similarity=0.135 Sum_probs=34.3
Q ss_pred CCceeEeeeeccCCCHHHHHHHH---HHcCCCEEEEEecCCCccccchHHHHHHHHHHHH
Q 019457 188 LPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 244 (340)
Q Consensus 188 ~~~~V~~aMrY~~P~i~eal~~l---~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~~~ 244 (340)
..++|..| -+...++++++.. .+.|+|-++++| |.|...|-...++.+.+..+
T Consensus 69 gr~pviaG--vg~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~~~~~l~~~f~~ia~ 124 (291)
T 3tak_A 69 KRIPIIAG--TGANSTREAIELTKAAKDLGADAALLVT--PYYNKPTQEGLYQHYKAIAE 124 (291)
T ss_dssp TSSCEEEE--CCCSSHHHHHHHHHHHHHHTCSEEEEEC--CCSSCCCHHHHHHHHHHHHH
T ss_pred CCCeEEEe--CCCCCHHHHHHHHHHHHhcCCCEEEEcC--CCCCCCCHHHHHHHHHHHHH
Confidence 35777766 4678899998854 456999888775 55655555555555544433
No 49
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=29.21 E-value=1.9e+02 Score=26.34 Aligned_cols=50 Identities=12% Similarity=-0.017 Sum_probs=35.4
Q ss_pred eeeccCCCHHHHHHHHHHcCCCEEEEEecCCCccccchHHHHHHHHHHHHh
Q 019457 195 GMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFRE 245 (340)
Q Consensus 195 aMrY~~P~i~eal~~l~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~~~~ 245 (340)
+..-++|..++++++....|+|+++++. -|.|....+..+-..+.+++++
T Consensus 61 av~~G~~~~~~~lr~ala~GaD~vi~v~-d~~~~~~~~~~~a~~La~~i~~ 110 (264)
T 1o97_C 61 VVSVGPDRVDESLRKCLAKGADRAVRVW-DDAAEGSDAIVVGRILTEVIKK 110 (264)
T ss_dssp EEEESCGGGHHHHHHHHHTTCSEEEEEC-CGGGTTCCHHHHHHHHHHHHHH
T ss_pred EEEeCchhHHHHHHHHHhcCCCEEEEEc-CcccccCCHHHHHHHHHHHHHh
Confidence 4455777789999999889999999997 5665555555554555555544
No 50
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=28.44 E-value=1.9e+02 Score=26.38 Aligned_cols=46 Identities=15% Similarity=0.213 Sum_probs=30.8
Q ss_pred CceeEeeeeccCCCHHHHHHHH---HHcCCCEEEEEecCCCccccchHHHHHH
Q 019457 189 PVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRV 238 (340)
Q Consensus 189 ~~~V~~aMrY~~P~i~eal~~l---~~~G~~~IvvlPLyPqYS~sTtgS~~~~ 238 (340)
+++|..|- +...++++++.. .+.|+|-++++| |.|...|-...++.
T Consensus 70 r~pvi~Gv--g~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~s~~~l~~~ 118 (291)
T 3a5f_A 70 RIPVIAGT--GSNNTAASIAMSKWAESIGVDGLLVIT--PYYNKTTQKGLVKH 118 (291)
T ss_dssp SSCEEEEC--CCSSHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHH
T ss_pred CCcEEEeC--CcccHHHHHHHHHHHHhcCCCEEEEcC--CCCCCCCHHHHHHH
Confidence 56777663 677899988754 456999888876 56665554443333
No 51
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=27.25 E-value=2e+02 Score=27.64 Aligned_cols=50 Identities=14% Similarity=0.081 Sum_probs=32.3
Q ss_pred CCCceeEeeeeccCCCHHHHHHHH---HHcCCCEEEEEecCCCccccchHHHHHHHH
Q 019457 187 NLPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQ 240 (340)
Q Consensus 187 g~~~~V~~aMrY~~P~i~eal~~l---~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~ 240 (340)
+..++|..|- +...++++++.. .+.|++-++++| |.|...|-...++.+.
T Consensus 126 ~grvpViaGv--g~~st~eai~la~~A~~~Gadavlvv~--PyY~k~sq~gl~~hf~ 178 (360)
T 4dpp_A 126 GGSIKVIGNT--GSNSTREAIHATEQGFAVGMHAALHIN--PYYGKTSIEGLIAHFQ 178 (360)
T ss_dssp TTTSEEEEEC--CCSSHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHH
T ss_pred CCCCeEEEec--CCCCHHHHHHHHHHHHHcCCCEEEEcC--CCCCCCCHHHHHHHHH
Confidence 3457777663 678899988754 356999888875 4565555444444443
No 52
>3jrn_A AT1G72930 protein; TIR domain arabidopsis thaliana, plant protein; 2.00A {Arabidopsis thaliana}
Probab=26.94 E-value=77 Score=27.43 Aligned_cols=82 Identities=13% Similarity=0.238 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHhcCCCceeEee---eeccCCCHHHHHHHHHHcCCCEEEEEecCCCccccchHHHHHHHHHHHHhhccCC
Q 019457 174 EQAQALKTALEAKNLPVNVYVG---MRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLS 250 (340)
Q Consensus 174 ~Qa~~L~~~L~~~g~~~~V~~a---MrY~~P~i~eal~~l~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~~~~~~~~~ 250 (340)
..+..|.++|...|. .+++- +.-|.+..++.++.+. -.++.++.+.|.|..++- +++++.++++....
T Consensus 23 ~Fv~~L~~~L~~~gi--~~f~D~~~l~~G~~i~~~l~~aIe---~Sri~IvV~S~ny~~S~W--Cl~EL~~i~~~~~~-- 93 (176)
T 3jrn_A 23 NFISFLYKELVRRSI--RTFKDDKELENGQRFSPELKSPIE---VSRFAVVVVSENYAASSW--CLDELVTIMDFEKK-- 93 (176)
T ss_dssp THHHHHHHHHHHTTC--CEECCCC--------------CCT---TEEEEEEEECTTTTTCHH--HHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHCCC--EEEEEcccccCCCchHHHHHHHHH---hCCEEEEEecCCcCCChh--HHHHHHHHHhhhcc--
Confidence 355667777777764 34432 4445544444444443 357889999999976643 56777776543221
Q ss_pred CCCEEEecCCCC-ChH
Q 019457 251 RLPVSIIRSWYQ-REG 265 (340)
Q Consensus 251 ~~~v~~I~~~~~-~p~ 265 (340)
....+|+=||+ +|.
T Consensus 94 -~~~~ViPIfy~V~ps 108 (176)
T 3jrn_A 94 -GSITVMPIFYGVEPN 108 (176)
T ss_dssp -TSCEEEEEECSSCHH
T ss_pred -CCCEEEEEEecCCHH
Confidence 13466776665 443
No 53
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=26.57 E-value=1.1e+02 Score=28.18 Aligned_cols=46 Identities=9% Similarity=0.042 Sum_probs=30.8
Q ss_pred HHHHHHHHHhcCCCceeEeeeeccCC--------CHHHHHHHHHHcCCCEEEEE
Q 019457 176 AQALKTALEAKNLPVNVYVGMRYWYP--------FTEEAVQQIKRDRITRLVVL 221 (340)
Q Consensus 176 a~~L~~~L~~~g~~~~V~~aMrY~~P--------~i~eal~~l~~~G~~~Ivvl 221 (340)
+..+-+...+.|..+.+++++-|+.| ++.+.++++.+.|++.|.+-
T Consensus 126 ~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~ 179 (302)
T 2ftp_A 126 FVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLG 179 (302)
T ss_dssp HHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 33333444567778888888887766 44556666778999976554
No 54
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=26.15 E-value=1.2e+02 Score=26.44 Aligned_cols=11 Identities=9% Similarity=0.404 Sum_probs=5.0
Q ss_pred HHHHHHHHcCCC
Q 019457 205 EAVQQIKRDRIT 216 (340)
Q Consensus 205 eal~~l~~~G~~ 216 (340)
+.++.+.+ |+-
T Consensus 80 ~~~~~~~~-~iP 90 (289)
T 3k9c_A 80 DELGALAD-RVP 90 (289)
T ss_dssp HHHHHHHT-TSC
T ss_pred HHHHHHHc-CCC
Confidence 44444443 444
No 55
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=25.95 E-value=3.1e+02 Score=23.38 Aligned_cols=13 Identities=23% Similarity=0.440 Sum_probs=6.5
Q ss_pred HHHHHHHHHcCCC
Q 019457 204 EEAVQQIKRDRIT 216 (340)
Q Consensus 204 ~eal~~l~~~G~~ 216 (340)
.+.++.+.+.|+-
T Consensus 75 ~~~~~~l~~~~iP 87 (276)
T 3jy6_A 75 PQTVQEILHQQMP 87 (276)
T ss_dssp HHHHHHHHTTSSC
T ss_pred HHHHHHHHHCCCC
Confidence 4455555555544
No 56
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=25.59 E-value=3.3e+02 Score=23.53 Aligned_cols=32 Identities=6% Similarity=-0.097 Sum_probs=23.9
Q ss_pred ceeEeeeeccCCCHHHHHHHHHHcCCCEEEEE
Q 019457 190 VNVYVGMRYWYPFTEEAVQQIKRDRITRLVVL 221 (340)
Q Consensus 190 ~~V~~aMrY~~P~i~eal~~l~~~G~~~Ivvl 221 (340)
+-+...|.|..-.++++++.+++.|++.|=+.
T Consensus 12 ~~~~~~~~f~~~~~~~~l~~~~~~G~~~vEl~ 43 (269)
T 3ngf_A 12 FAANLSTMFNEVPFLERFRLAAEAGFGGVEFL 43 (269)
T ss_dssp EEEETTTSCTTSCHHHHHHHHHHTTCSEEECS
T ss_pred eeeechhhhccCCHHHHHHHHHHcCCCEEEec
Confidence 44555677777788888888888888877654
No 57
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=25.32 E-value=89 Score=29.06 Aligned_cols=46 Identities=13% Similarity=0.158 Sum_probs=31.8
Q ss_pred HHHHHHHHHhcCCCceeEeeeeccCC--------CHHHHHHHHHHcCCCEEEEE
Q 019457 176 AQALKTALEAKNLPVNVYVGMRYWYP--------FTEEAVQQIKRDRITRLVVL 221 (340)
Q Consensus 176 a~~L~~~L~~~g~~~~V~~aMrY~~P--------~i~eal~~l~~~G~~~Ivvl 221 (340)
+...-+...+.|..+.+++.|.|+.| ++.+.++++.+.|+++|.+-
T Consensus 124 ~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~ 177 (307)
T 1ydo_A 124 LKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELSLG 177 (307)
T ss_dssp HHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEEc
Confidence 33333445567777888888887766 45666777888999976654
No 58
>3szu_A ISPH, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; 3Fe-4S iron-sulfur cluster, conserved cysteine, IPP and DMAP production final STEP; HET: H6P; 1.40A {Escherichia coli} PDB: 3szl_A* 3f7t_A* 3szo_A* 3t0f_A* 3t0g_A* 3urk_A* 3utc_A* 3utd_A* 3uv3_A* 3uv6_A* 3uv7_A* 3uwm_A* 3ke8_A* 3ke9_A* 3kef_A* 3kel_A 3kem_A*
Probab=25.13 E-value=37 Score=32.53 Aligned_cols=38 Identities=21% Similarity=0.325 Sum_probs=26.1
Q ss_pred CceEEEEEecCCchhhhc---cCC-------CchHHHHHHHHHHHHHH
Q 019457 285 EEVMIFFSAHGVPVSYVE---KAG-------DPYRDQMEECIYLIMQR 322 (340)
Q Consensus 285 ~~~~LlFSaHglP~~~ie---~~G-------DpY~~q~~~T~~~Iae~ 322 (340)
++..+||+|||+|....+ ++| -|+...++..++...++
T Consensus 77 ~g~~VIirAHGv~~~v~~~a~~rgl~iiDATCP~V~Kvh~~v~~~~~~ 124 (328)
T 3szu_A 77 DGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRR 124 (328)
T ss_dssp TTCEEEECTTCCCHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHCCCEEEECCCcchHHHHHHHHHHHhC
Confidence 445799999999987642 234 37777777776666554
No 59
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=24.41 E-value=2.5e+02 Score=25.55 Aligned_cols=42 Identities=17% Similarity=0.136 Sum_probs=28.8
Q ss_pred HHHHHhcCCCceeEeeeeccCC--------CHHHHHHHHHHcCCCEEEEE
Q 019457 180 KTALEAKNLPVNVYVGMRYWYP--------FTEEAVQQIKRDRITRLVVL 221 (340)
Q Consensus 180 ~~~L~~~g~~~~V~~aMrY~~P--------~i~eal~~l~~~G~~~Ivvl 221 (340)
-+...+.|.++.+++.|.|+.| ++.+.++++.+.|++.|.+-
T Consensus 127 i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~ 176 (298)
T 2cw6_A 127 LKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLG 176 (298)
T ss_dssp HHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEec
Confidence 3444566777777777666544 55667778888999976655
No 60
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=24.19 E-value=3.7e+02 Score=23.77 Aligned_cols=8 Identities=13% Similarity=0.613 Sum_probs=4.3
Q ss_pred CCceEEEE
Q 019457 97 EDKVGVLL 104 (340)
Q Consensus 97 ~~k~aVLL 104 (340)
..++||++
T Consensus 61 ~~~Igvi~ 68 (338)
T 3dbi_A 61 TQTLGLVV 68 (338)
T ss_dssp CSEEEEEE
T ss_pred CCEEEEEe
Confidence 34456665
No 61
>3k6t_A Female germline-specific tumor suppressor GLD-1; QUA1 homodimerization domain, helix-turn-helix motif, hydrophobic homodimer interface; 2.04A {Caenorhabditis elegans} PDB: 3kbl_A
Probab=23.62 E-value=18 Score=26.39 Aligned_cols=45 Identities=18% Similarity=0.247 Sum_probs=33.9
Q ss_pred cHHHHHHhhcCCCCccc-CChhhhhhhhHHHHHHHhccchhhHHhhcccC
Q 019457 115 DVQPFLFNLFADPDIIR-LPRLFRFLQWPLAKLISVVRAPKSKEGYAAIG 163 (340)
Q Consensus 115 dV~~FL~~~l~D~~VI~-lP~~~~~~~~~L~~lI~~~R~~ksa~~Y~~IG 163 (340)
....||.+++.|+..+. .|..|-.+-++|..-|.+.| ...|+.-+
T Consensus 5 ~~~eYL~qLlkdKk~l~~~p~~f~HlerLLdeEI~RVR----~~Lf~~~~ 50 (60)
T 3k6t_A 5 ATVEYLADLVKEKKHLTLFPHMFSNVERLLDDEIGRVR----VALFQTEF 50 (60)
T ss_dssp CCHHHHHHHHHHHHHHTTSTTTCHHHHHHHHHHHHHHH----HHHHHHHS
T ss_pred ccHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH----HHHHccCC
Confidence 34589999999998754 58777777777888899888 45665443
No 62
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=22.95 E-value=2.5e+02 Score=22.31 Aligned_cols=65 Identities=12% Similarity=0.037 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHhcCCCceeEeeeeccCCCHHHHHHHHHHcCCCEEEEEecCCC--ccccchHHHHHHH
Q 019457 173 DEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQ--FSISTTGSSIRVL 239 (340)
Q Consensus 173 ~~Qa~~L~~~L~~~g~~~~V~~aMrY~~P~i~eal~~l~~~G~~~IvvlPLyPq--YS~sTtgS~~~~l 239 (340)
++..+.+.+.+.+.|.++.+..-...+.| .++.++...+.++| +||+--... ....-.||..+.+
T Consensus 77 ~~~l~~~~~~~~~~g~~~~~~~~v~~G~~-~~~I~~~a~~~~~D-LIV~G~~g~~~~~~~~lGSv~~~v 143 (155)
T 3dlo_A 77 KETLSWAVSIIRKEGAEGEEHLLVRGKEP-PDDIVDFADEVDAI-AIVIGIRKRSPTGKLIFGSVARDV 143 (155)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEESSSCH-HHHHHHHHHHTTCS-EEEEECCEECTTSCEECCHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCceEEEEecCCCH-HHHHHHHHHHcCCC-EEEECCCCCCCCCCEEeccHHHHH
Confidence 33444455556666766666555566665 35556566666887 555554332 1222245554443
No 63
>3v4k_A DNA DC->DU-editing enzyme apobec-3G; antiviral defense, HOST-virus interaction, hydrola metal-binding, nucleus; HET: DNA; 1.38A {Homo sapiens} PDB: 3v4j_A* 3ir2_A* 2kem_A* 2jyw_A* 2kbo_A* 3e1u_A* 3iqs_A*
Probab=22.34 E-value=2.4e+02 Score=25.16 Aligned_cols=101 Identities=11% Similarity=0.185 Sum_probs=60.2
Q ss_pred HhhcccC--CCCchhHHHHHHHHHHHHHHHh-cCCCceeEee-eeccCCCHHHHHHHHHHcCCCEEEEEecCCCccccch
Q 019457 157 EGYAAIG--GGSPLRKITDEQAQALKTALEA-KNLPVNVYVG-MRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTT 232 (340)
Q Consensus 157 ~~Y~~IG--ggSPL~~~T~~Qa~~L~~~L~~-~g~~~~V~~a-MrY~~P~i~eal~~l~~~G~~~IvvlPLyPqYS~sTt 232 (340)
+.|+-.. --||=..=.++.++ -|.+ .++...++.| ..|+.|...++|+.|.++|++ |-+--|+.|
T Consensus 98 ~~Y~vTwy~SWSPC~~CA~~v~~----FL~~~~~v~L~If~aRLY~~~~~~~~gLr~L~~aG~~--v~iM~~~ef----- 166 (203)
T 3v4k_A 98 QDYRVTCFTSWSPCFSCAQEMAK----FISKNKHVSLCIKTARIYDDQGRCQEGLRTLAEAGAK--ISIMTYSEF----- 166 (203)
T ss_pred CeEEEEEEEeCCChHHHHHHHHH----HHhhCCCeEEEEEEEeecccCchHHHHHHHHHHCCCe--EEecCHHHH-----
Confidence 5677664 34888765544444 4443 3466788887 334589999999999999976 333222222
Q ss_pred HHHHHHHHHHHHhhccCCCCCEEEecCCCCChHHHHHHHHHHHHHH
Q 019457 233 GSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKEL 278 (340)
Q Consensus 233 gS~~~~l~~~~~~~~~~~~~~v~~I~~~~~~p~yI~a~a~~I~~~L 278 (340)
..-++......+ +--.+|.+=+...+++..++++-|
T Consensus 167 ---~~CW~~FV~nqg-------~pF~PW~~L~en~~~l~~~L~~IL 202 (203)
T 3v4k_A 167 ---KHCWDTFVDHQG-------APFQPWDGLDEHSQDLSGRLRAIL 202 (203)
T ss_pred ---HHHHHHHccCCC-------CCCCchhHHHHHHHHHHHHHHHHh
Confidence 112222222111 123458877778888887776654
No 64
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=21.72 E-value=3.9e+02 Score=23.07 Aligned_cols=51 Identities=12% Similarity=0.029 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHhcCCCceeEeeeeccCCCHHHHHHHHHHcCCCEEEEEecC
Q 019457 172 TDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLY 224 (340)
Q Consensus 172 T~~Qa~~L~~~L~~~g~~~~V~~aMrY~~P~i~eal~~l~~~G~~~IvvlPLy 224 (340)
..+..+.+++.+.+.|. .+.+......--..+.++.+.+.++|-||++|..
T Consensus 25 ~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~ 75 (294)
T 3qk7_A 25 FLEMISWIGIELGKRGL--DLLLIPDEPGEKYQSLIHLVETRRVDALIVAHTQ 75 (294)
T ss_dssp HHHHHHHHHHHHHHTTC--EEEEEEECTTCCCHHHHHHHHHTCCSEEEECSCC
T ss_pred HHHHHHHHHHHHHHCCC--EEEEEeCCChhhHHHHHHHHHcCCCCEEEEeCCC
Confidence 34455555666655553 3333222222223445555666677777766654
No 65
>2q7s_A N-formylglutamate amidohydrolase; YP_297560.1, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE; 2.00A {Ralstonia eutropha} SCOP: c.56.5.9
Probab=20.96 E-value=62 Score=30.20 Aligned_cols=31 Identities=13% Similarity=0.400 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCceEEEEEecCCchh
Q 019457 265 GYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVS 299 (340)
Q Consensus 265 ~yI~a~a~~I~~~L~~~~~~~~~~LlFSaHglP~~ 299 (340)
-|.+++++.|.+..++++ ..+|++.||+|-.
T Consensus 147 PYH~aL~~~l~~~~a~~g----~~vlid~HS~~~~ 177 (290)
T 2q7s_A 147 PYHAALTEAVEGAYQRFG----AVWHLNLHSMPNN 177 (290)
T ss_dssp HHHHHHHHHHHHHHHHHS----CEEEEEEEEECTT
T ss_pred HHHHHHHHHHHHHHHhCC----CEEEEEecCCCCc
Confidence 488999999988888774 2699999999875
No 66
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=20.66 E-value=46 Score=26.33 Aligned_cols=16 Identities=25% Similarity=0.424 Sum_probs=12.1
Q ss_pred CCCceEEEEEccCCCC
Q 019457 96 AEDKVGVLLLNLGGPD 111 (340)
Q Consensus 96 ~~~k~aVLLlNlG~P~ 111 (340)
|+.|.||||+.+|+++
T Consensus 2 m~~~~alllv~HGS~~ 17 (126)
T 3lyh_A 2 MTQPHQIILLAHGSSD 17 (126)
T ss_dssp ---CEEEEEEECCCSC
T ss_pred CCCCcEEEEEeCCCCC
Confidence 5567899999999986
No 67
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=20.62 E-value=2.5e+02 Score=23.83 Aligned_cols=50 Identities=10% Similarity=0.012 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHhcCCCceeEeeeeccCCC-HHHHHHHHHHcCCCEEEEEe
Q 019457 171 ITDEQAQALKTALEAKNLPVNVYVGMRYWYPF-TEEAVQQIKRDRITRLVVLP 222 (340)
Q Consensus 171 ~T~~Qa~~L~~~L~~~g~~~~V~~aMrY~~P~-i~eal~~l~~~G~~~IvvlP 222 (340)
+..+..+.+++.+.+.|..+ .+......+. ..+.++.+...+++-||+.|
T Consensus 22 ~~~~~~~gi~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~l~~~~~dgiIi~~ 72 (277)
T 3e61_A 22 FFTLIARGVEDVALAHGYQV--LIGNSDNDIKKAQGYLATFVSHNCTGMISTA 72 (277)
T ss_dssp HHHHHHHHHHHHHHHTTCCE--EEEECTTCHHHHHHHHHHHHHTTCSEEEECG
T ss_pred HHHHHHHHHHHHHHHCCCEE--EEEeCCCCHHHHHHHHHHHHhCCCCEEEEec
Confidence 33444555555555554322 2222222221 12345555556666666655
No 68
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=20.48 E-value=1.5e+02 Score=28.51 Aligned_cols=78 Identities=22% Similarity=0.226 Sum_probs=45.9
Q ss_pred EccCCCCCcCcHHHHHHhhcCCCCcccCChhhhhhhhHHHHHHHhccchhhHHhhccc-CCCCchhHHHHHHHHHHHHHH
Q 019457 105 LNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAI-GGGSPLRKITDEQAQALKTAL 183 (340)
Q Consensus 105 lNlG~P~s~~dV~~FL~~~l~D~~VI~lP~~~~~~~~~L~~lI~~~R~~ksa~~Y~~I-GggSPL~~~T~~Qa~~L~~~L 183 (340)
+.+||-.+.+.+...++-+++||+|=-+ .-.| ||--.- ...|+.+-+++
T Consensus 287 lD~gG~a~~~~~~~~~~~il~d~~v~~i--------------------------lvni~ggi~~~----~~vA~gii~a~ 336 (388)
T 2nu8_B 287 LDVGGGATKERVTEAFKIILSDDKVKAV--------------------------LVNIFGGIVRC----DLIADGIIGAV 336 (388)
T ss_dssp EECCSCCCHHHHHHHHHHHHTSTTCCEE--------------------------EEEEESCSSCH----HHHHHHHHHHH
T ss_pred eEecCCCCHHHHHHHHHHHhcCCCCCEE--------------------------EEEecCCcCCc----hHHHHHHHHHH
Confidence 3445555667888888888888875111 0012 442222 23445555555
Q ss_pred HhcCCCceeEeeeeccCCCHHHHHHHHHHcC
Q 019457 184 EAKNLPVNVYVGMRYWYPFTEEAVQQIKRDR 214 (340)
Q Consensus 184 ~~~g~~~~V~~aMrY~~P~i~eal~~l~~~G 214 (340)
++.+...+|.+ |-.-+..++..+-|.+.|
T Consensus 337 ~~~~~~~pivv--rl~G~n~~~g~~~l~~~g 365 (388)
T 2nu8_B 337 AEVGVNVPVVV--RLEGNNAELGAKKLADSG 365 (388)
T ss_dssp HHHTCCSCEEE--EEESTTHHHHHHHHHTTC
T ss_pred HhcCCCCeEEE--EeCCCCHHHHHHHHHHCC
Confidence 54344556665 556678889988887766
Done!