BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019459
(340 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93W28|Y4554_ARATH Uncharacterized protein At4g15545 OS=Arabidopsis thaliana
GN=At4g15545 PE=1 SV=1
Length = 337
Score = 244 bits (622), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 206/342 (60%), Gaps = 33/342 (9%)
Query: 10 GGPDFHLPDEVLAVIPTDPYDQLDLARKITSMAIASRVSKLETETGTMRQMLYEKDRLIC 69
G F LPDE+L V+P+DP++QLD+ARKITS+A+++RVS LE+E+ +R++L EK++
Sbjct: 18 GSRSFDLPDELLQVLPSDPFEQLDVARKITSIALSTRVSALESESSDLRELLAEKEKEFE 77
Query: 70 ELEERLSHVQKVYQEADSKLKIFIDDNAKLAKERDSLAMTARNLSRDLAKLETFKRQLMQ 129
EL+ + ++ +A KL + + L +E SL+ T + L RD++KLE F++ LM
Sbjct: 78 ELQSHVESLEASLSDAFHKLSLADGEKENLIRENASLSNTVKRLQRDVSKLEGFRKTLMM 137
Query: 130 SLNDDNSSAETVDIGTCDQPVPRAYPDKDGGNNGYTAHHSFNGSTDMGNTVDEVS---RN 186
SL DD+ +A T I +P P D + HS S ++ + N
Sbjct: 138 SLQDDDQNAGTTQI--IAKPTP-----NDDDTPFQPSRHSSIQSQQASEAIEPAATDNEN 190
Query: 187 TAQRFSLT---PYI----TPRLTPTGTPKVISTSVSPRGYSVAGSPKRTSGTMSPTKTQ- 238
A + SL+ P + TPRLTP G+P ++S S +P+ S SP+R S + + T+
Sbjct: 191 DAPKPSLSASLPLVSQTTTPRLTPPGSPPILSASGTPKTTSRPISPRRHSVSFATTRGMF 250
Query: 239 NDGRISLSSWYPSSQQSSAANSPPRGRSLPGRTPRIDGKEFFRQARSRLSYEQFSAFLAS 298
+D R S+S P SQ RT R+DGKEFFRQ RSRLSYEQF AFL +
Sbjct: 251 DDTRSSISISEPGSQT--------------ART-RVDGKEFFRQVRSRLSYEQFGAFLGN 295
Query: 299 IKELNAQKQTREETLRKAEEIFGTDNKDLYLYFQGLLNRNVH 340
+K+LNA KQTREETLRKAEEIFG DN+DLY+ F+GL+ RN H
Sbjct: 296 VKDLNAHKQTREETLRKAEEIFGGDNRDLYVIFEGLITRNAH 337
>sp|Q8T079|GLYR1_DROME Putative oxidoreductase GLYR1 homolog OS=Drosophila melanogaster
GN=CG4747 PE=1 SV=1
Length = 602
Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 160 GNNGYTAHHSFNGSTDMGNTVD-EVSRNTAQRFSLTPYITPRLTPTGTPK---VISTSV- 214
GNNG AH GS D G+ +D E++ +++ +P +T + TPK V +TSV
Sbjct: 152 GNNGVVAH--VVGSPDEGDGLDVEINADSSASPVTSPAVTTKAAGKRTPKAKSVAATSVK 209
Query: 215 SPRGYSVAGSPKRTSGTMSPTKTQNDGRISLSSWYPSSQQSSAANSPPRGR 265
S +G + + +RTS SP+ N R + Q + A+S P GR
Sbjct: 210 STKGSAKSAQKRRTSAQQSPSGPSNAKRGKRDVSGEALQDADEASSTPTGR 260
>sp|Q8TAV0|FA76A_HUMAN Protein FAM76A OS=Homo sapiens GN=FAM76A PE=2 SV=1
Length = 307
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 47 VSKLETETGTMRQMLYEKDRLICELEERLSHVQKVYQEADSKLKIFIDDNAKLAKE-RDS 105
+++L+ E T+++ML++KD++I E E++++ ++ +Q +S+++ ++ K KE +
Sbjct: 218 IAQLKEEVATLKKMLHQKDQMILEKEKKITELKADFQYQESQMRAKMNQMEKTHKEVTEQ 277
Query: 106 LAMTARNLSRDLAKL 120
L R L + A L
Sbjct: 278 LQAKNRELLKQAAAL 292
>sp|Q5EA89|FA76A_BOVIN Protein FAM76A OS=Bos taurus GN=FAM76A PE=2 SV=1
Length = 307
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 47 VSKLETETGTMRQMLYEKDRLICELEERLSHVQKVYQEADSKLKIFIDDNAKLAKE-RDS 105
+++L+ E T+++ML++KD++I E E++++ ++ +Q +S+++ ++ K KE +
Sbjct: 218 IAQLKEEVATLKKMLHQKDQMILEKEKKITELKADFQYQESQMRAKMNQMEKTHKEVTEQ 277
Query: 106 LAMTARNLSRDLAKL 120
L R L + A L
Sbjct: 278 LQAKNRELLKQAAAL 292
>sp|Q80WC3|TNC18_MOUSE Trinucleotide repeat-containing gene 18 protein OS=Mus musculus
GN=Tnrc18 PE=1 SV=2
Length = 2878
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 15 HLPDEVLAVIPTDPYDQLDLARKITSMAIASRVSKLETETGTMRQMLYEKDRLICELEER 74
H+ EVL +DP L L R++ S S + K E M+ L + D L + R
Sbjct: 1356 HMLKEVLESPFSDPLKNLRLPRELNSNKKYSWMQKKEERMFAMKSSLEDMDALELDFRMR 1415
Query: 75 LSHVQKVYQEADSKLKIFIDDNAKLAKERDS 105
L+ VQ+ Y+E +L KL + RDS
Sbjct: 1416 LAEVQRRYKEKQREL-------VKLQRRRDS 1439
>sp|Q922G2|FA76A_MOUSE Protein FAM76A OS=Mus musculus GN=Fam76a PE=2 SV=1
Length = 307
Score = 36.6 bits (83), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 47 VSKLETETGTMRQMLYEKDRLICELEERLSHVQKVYQEADSKLKIFIDDNAKLAKE-RDS 105
+++L+ E T+++ML++KD++I E E++++ ++ +Q +S+ + ++ K KE +
Sbjct: 218 IAQLKEEVATLKKMLHQKDQMILEKEKKITELKADFQYQESQTRAKMNQMEKTHKEVTEQ 277
Query: 106 LAMTARNLSRDLAKL 120
L R L + A L
Sbjct: 278 LQAKNRELLKQAAAL 292
>sp|Q5ZJ65|FA76A_CHICK Protein FAM76A OS=Gallus gallus GN=FAM76A PE=2 SV=1
Length = 307
Score = 36.2 bits (82), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 47 VSKLETETGTMRQMLYEKDRLICELEERLSHVQKVYQEADSKLKIFIDDNAKLAKE-RDS 105
+++L+ E T+++ML++KD++I E E++++ ++ Q +S+++ ++ K KE +
Sbjct: 218 IAQLKEEVATLKKMLHQKDQMILEKEKKITELKADLQYQESQMRAKMNQMEKTHKEVMEQ 277
Query: 106 LAMTARNLSRDLAKLETFKR 125
L R L + A L K+
Sbjct: 278 LQAKNRELLKQAAALSKGKK 297
>sp|Q0BY00|UVRC_HYPNA UvrABC system protein C OS=Hyphomonas neptunium (strain ATCC 15444)
GN=uvrC PE=3 SV=1
Length = 614
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 11/88 (12%)
Query: 23 VIPTDPYDQLDLARKITSMAIASRVSKLETETGTMRQMLYEKDRLICEL----------- 71
++ ++P DQ DL + ++ R+ E GT R +L + +R E
Sbjct: 314 ILVSEPPDQADLIEEALALKAGRRIELRRPERGTKRDLLTQAERNASEALSRKLAESASQ 373
Query: 72 EERLSHVQKVYQEADSKLKIFIDDNAKL 99
E L+ VQKV+ A++ +I + DN+ +
Sbjct: 374 ERLLTEVQKVFDLAEAPQRIEVYDNSHI 401
>sp|Q8IBG1|DYHC1_PLAF7 Dynein heavy chain-like protein MAL7P1.162 OS=Plasmodium falciparum
(isolate 3D7) GN=MAL7P1.162 PE=2 SV=2
Length = 4985
Score = 33.9 bits (76), Expect = 1.9, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 16/81 (19%)
Query: 39 TSMAIASRVSKLETETGTMRQMLYEKDRLICELEERL-----------SHVQKVYQE--- 84
T + + KL+ ET E+ +ICELE++L S VQ + QE
Sbjct: 3609 TVQPLEKEIEKLQEETKVAEDQYNEQRDIICELEKKLVQYKNDYAQLISQVQNIKQEMEM 3668
Query: 85 ADSKLKIFID--DNAKLAKER 103
++K+K I+ DN K KER
Sbjct: 3669 VENKIKRSINLIDNLKSEKER 3689
>sp|Q9UF83|YM012_HUMAN Uncharacterized protein DKFZp434B061 OS=Homo sapiens PE=2 SV=2
Length = 564
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 15/77 (19%)
Query: 199 PRLTPTGTPKVISTSVSPRGYSVAGSPKRTSGTMSPTK------------TQNDGRISLS 246
PR +PTGTP S + +P S G+P R S T +P + T+ R SL+
Sbjct: 111 PRASPTGTPSTASPTGTPSSASPTGTPPRASPTGTPPRAWATRSPSTASLTRTPSRASLT 170
Query: 247 SWYPSSQQSSAANSPPR 263
W P ++S +PPR
Sbjct: 171 RWPP---RASPTRTPPR 184
>sp|O15417|TNC18_HUMAN Trinucleotide repeat-containing gene 18 protein OS=Homo sapiens
GN=TNRC18 PE=1 SV=3
Length = 2968
Score = 32.7 bits (73), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%)
Query: 15 HLPDEVLAVIPTDPYDQLDLARKITSMAIASRVSKLETETGTMRQMLYEKDRLICELEER 74
H+ EVL DP L L R++ S + K E M+ L + D L + R
Sbjct: 1427 HMLREVLDGPVVDPLKNLRLPRELKPNKKYSWMRKKEERMYAMKSSLEDMDALELDFRMR 1486
Query: 75 LSHVQKVYQEADSKL 89
L+ VQ+ Y+E +L
Sbjct: 1487 LAEVQRQYKEKQREL 1501
>sp|P02567|MYO1_CAEEL Myosin-1 OS=Caenorhabditis elegans GN=let-75 PE=2 SV=3
Length = 1938
Score = 32.3 bits (72), Expect = 5.1, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 57/141 (40%), Gaps = 31/141 (21%)
Query: 30 DQLDLARKIT--SMAIASRVSKLETETGTMRQMLYEKDRLICELEERLSHVQKVYQEADS 87
D+ LA ++T S A R+ ++E E RQ + DR EL+ L + + E +
Sbjct: 1103 DEQALANRLTRQSKENAQRIIEIEDELEHERQSRSKADRARAELQRELDELNERLDEQNK 1162
Query: 88 KLKIFIDDNAKLAKE---------------RDSLAMTARN--------------LSRDLA 118
+L+I D+N K E D +AM R L + A
Sbjct: 1163 QLEIQQDNNKKKDSEIIKFRRDLDEKNMANEDQMAMIRRKNNDQISALTNTLDALQKSKA 1222
Query: 119 KLETFKRQLMQSLNDDNSSAE 139
K+E K L + L+D N+ +
Sbjct: 1223 KIEKEKGVLQKELDDINAQVD 1243
>sp|P0CB23|Y4862_ARATH Uncharacterized protein At4g38062 OS=Arabidopsis thaliana
GN=At4g38062 PE=2 SV=1
Length = 1050
Score = 32.0 bits (71), Expect = 6.1, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 43 IASRVSKLETETGTMRQMLYEKDRLICELEERLSHVQKVYQEADSKLKIFIDDNAKLAKE 102
I+S KLET ++ E + ELE + + +++V + KL+ + +L KE
Sbjct: 909 ISSLSQKLETSNESVSCFRQEATKSRAELETKQTELKEVTTQMQEKLRTSEAEKTELVKE 968
Query: 103 RDSLAMTARNLSRDLAKLE 121
SL+ RNL ++++E
Sbjct: 969 VASLSTEKRNLLSFISEME 987
>sp|Q60JJ0|SAS4_CAEBR Spindle assembly abnormal protein 4 OS=Caenorhabditis briggsae
GN=sas-4 PE=3 SV=2
Length = 761
Score = 32.0 bits (71), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 63 EKDRLICELEERLSHVQ----KVYQE---ADSKLKIFIDDNAKLAKERDSLAMTARNLSR 115
E ++I +L E+LS+ + K+ Q+ + K+K FI++N KL K+ + T + L +
Sbjct: 386 EHTQMIAKLREKLSNSESQNAKLRQDKRAVEEKMKKFIEENEKLTKDLNRNRATCQRLEK 445
Query: 116 DLAKLETFKRQ 126
+ +L T K +
Sbjct: 446 HIKQLRTEKEK 456
>sp|A1XQX8|NR3AA_DANRE Neurexin-3a OS=Danio rerio GN=nrxn3a PE=2 SV=1
Length = 1697
Score = 31.6 bits (70), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 206 TPKVISTSVSPRGYSVAGSPKRTSGTMSPTKTQNDGRISLSSWYPSSQQSSAANSPPR 263
T K +S+S GY A +PK S P K + GR + +S+ P +S+ ++PP+
Sbjct: 1493 TDKTLSSSTFEGGYK-AHAPKWGSKDFRPNKVFDSGRTTTASFSPKLSRSTTTSTPPK 1549
>sp|B7GFG2|YABA_ANOFW Initiation-control protein YabA OS=Anoxybacillus flavithermus
(strain DSM 21510 / WK1) GN=Aflv_0028 PE=3 SV=1
Length = 115
Score = 31.6 bits (70), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 71 LEERLSHVQKVYQEADSKLKIFIDDNAKLAKERDSLAMTARNLSRDLAKLETFKRQLMQS 130
+EE+++H+ K E S L I++N +L E D L LS K+E K+Q
Sbjct: 13 IEEQIAHLYKQLGELKSYLGELIEENHRLQVENDHLRRRLEQLSE--RKVEQGKKQ---- 66
Query: 131 LNDDNSSAETVDIGTCDQPVPRAYPD 156
+ A+ VDIG + R Y +
Sbjct: 67 -----TKAKLVDIGEGYDNLARLYQE 87
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.128 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 125,721,271
Number of Sequences: 539616
Number of extensions: 5201114
Number of successful extensions: 17335
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 201
Number of HSP's that attempted gapping in prelim test: 16846
Number of HSP's gapped (non-prelim): 657
length of query: 340
length of database: 191,569,459
effective HSP length: 118
effective length of query: 222
effective length of database: 127,894,771
effective search space: 28392639162
effective search space used: 28392639162
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)