Your job contains 1 sequence.
>019461
MAEVGECSASKPSREIWAKLEPSDSRFADVDISSNEVVICSEITSSSSDKHEWCKITRNS
DLHSAKMQNKSSNAILVDDTMVQNEEVVDIKCGTEIIPGPDREVYLNFRFKVVPVQESSN
QQLEISIDIEHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPHCRA
VVQFVGRNHYLHNIEQSILQAHSSLRRSDEEVALLDSYAYIKSNLVIRNGKKHRRKRAHS
PIDEESDSIELPCPQCGTEINGFHCNQTTVHLQCQGCGGMMPSRNDSVPQHCLGCDRAFC
GAYWHAQMVARSDSQPMCSHETFKPISERTSLGFHFLRTK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019461
(340 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2015318 - symbol:AT1G47570 species:3702 "Arabi... 1032 3.2e-104 1
UNIPROTKB|Q6P256 - symbol:chfr "E3 ubiquitin-protein liga... 190 2.1e-17 3
UNIPROTKB|Q5FWP4 - symbol:chfr "E3 ubiquitin-protein liga... 190 6.8e-17 3
UNIPROTKB|F5GWT6 - symbol:CHFR "E3 ubiquitin-protein liga... 199 7.5e-17 2
UNIPROTKB|Q5RF77 - symbol:CHFR "E3 ubiquitin-protein liga... 199 3.1e-16 2
ZFIN|ZDB-GENE-030131-3522 - symbol:chfr "checkpoint with ... 175 3.3e-16 3
UNIPROTKB|Q96EP1 - symbol:CHFR "E3 ubiquitin-protein liga... 199 1.8e-15 2
RGD|1306360 - symbol:Chfr "checkpoint with forkhead and r... 218 2.8e-15 1
UNIPROTKB|F1LN16 - symbol:Chfr "Protein Chfr" species:101... 218 2.8e-15 1
UNIPROTKB|E1BBP0 - symbol:CHFR "Uncharacterized protein" ... 195 2.9e-15 3
UNIPROTKB|F1NVB6 - symbol:F1NVB6 "Uncharacterized protein... 190 3.9e-15 3
UNIPROTKB|F1RI73 - symbol:CHFR "Uncharacterized protein" ... 189 9.4e-14 2
MGI|MGI:2444898 - symbol:Chfr "checkpoint with forkhead a... 203 1.7e-13 2
UNIPROTKB|E2QUI8 - symbol:CHFR "Uncharacterized protein" ... 185 2.2e-13 3
UNIPROTKB|J3KN56 - symbol:CHFR "E3 ubiquitin-protein liga... 198 6.5e-13 1
DICTYBASE|DDB_G0279263 - symbol:DDB_G0279263 "E3 ubiquiti... 171 1.7e-12 2
ZFIN|ZDB-GENE-070912-318 - symbol:ftr27 "finTRIM family, ... 110 3.6e-06 2
UNIPROTKB|Q2YDF9 - symbol:PCGF1 "Polycomb group RING fing... 126 1.5e-05 1
ZFIN|ZDB-GENE-070912-229 - symbol:ftr07 "finTRIM family, ... 133 2.3e-05 2
WB|WBGene00008588 - symbol:F08G12.5 species:6239 "Caenorh... 118 3.1e-05 1
UNIPROTKB|C9J3G7 - symbol:PCGF3 "Polycomb group RING fing... 105 3.3e-05 1
ZFIN|ZDB-GENE-070912-225 - symbol:ftr03 "finTRIM family, ... 118 6.9e-05 2
UNIPROTKB|Q14258 - symbol:TRIM25 "E3 ubiquitin/ISG15 liga... 126 7.6e-05 1
UNIPROTKB|D6RAS2 - symbol:TRIM60 "Tripartite motif-contai... 101 8.9e-05 1
RGD|1549782 - symbol:Pcgf1 "polycomb group ring finger 1"... 118 0.00010 1
UNIPROTKB|Q6DLV9 - symbol:Pcgf1 "Polycomb group RING fing... 118 0.00010 1
UNIPROTKB|C9JYD0 - symbol:PCGF3 "Polycomb group RING fing... 100 0.00011 1
UNIPROTKB|F8WD60 - symbol:RNF168 "E3 ubiquitin-protein li... 99 0.00015 1
UNIPROTKB|F1MM90 - symbol:PCGF1 "Polycomb group RING fing... 116 0.00021 1
UNIPROTKB|E2R984 - symbol:PCGF1 "Uncharacterized protein"... 116 0.00021 1
UNIPROTKB|Q9BSM1 - symbol:PCGF1 "Polycomb group RING fing... 116 0.00021 1
MGI|MGI:1917087 - symbol:Pcgf1 "polycomb group ring finge... 116 0.00021 1
WB|WBGene00019828 - symbol:R02E12.4 species:6239 "Caenorh... 122 0.00021 1
UNIPROTKB|F1RZM3 - symbol:RFPL4B "Uncharacterized protein... 116 0.00026 1
UNIPROTKB|I3LB91 - symbol:RFPL4B "Uncharacterized protein... 116 0.00029 1
UNIPROTKB|E1BAF7 - symbol:E1BAF7 "Uncharacterized protein... 111 0.00066 1
UNIPROTKB|I3LDV4 - symbol:I3LDV4 "Uncharacterized protein... 112 0.00066 1
ZFIN|ZDB-GENE-080215-17 - symbol:ftr50 "finTRIM family, m... 115 0.00071 2
UNIPROTKB|I3LUY7 - symbol:I3LUY7 "Uncharacterized protein... 97 0.00073 1
UNIPROTKB|C9IZE0 - symbol:TRIM59 "Tripartite motif-contai... 92 0.00085 1
UNIPROTKB|C9J9F0 - symbol:TRIM59 "Tripartite motif-contai... 92 0.00085 1
UNIPROTKB|G3X8D4 - symbol:RNF168 "E3 ubiquitin-protein li... 107 0.00087 1
>TAIR|locus:2015318 [details] [associations]
symbol:AT1G47570 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=RCA]
[GO:0006310 "DNA recombination" evidence=RCA] [GO:0007062 "sister
chromatid cohesion" evidence=RCA] [GO:0007126 "meiosis"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0010332 "response to gamma radiation"
evidence=RCA] [GO:0032204 "regulation of telomere maintenance"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 EMBL:CP002684 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:BT011232
EMBL:BT012537 IPI:IPI00521071 RefSeq:NP_175188.3 UniGene:At.38596
ProteinModelPortal:Q6NL06 SMR:Q6NL06 PRIDE:Q6NL06
EnsemblPlants:AT1G47570.1 GeneID:841166 KEGG:ath:AT1G47570
OMA:RTQHHNE ProtClustDB:CLSN2680745 Genevestigator:Q6NL06
Uniprot:Q6NL06
Length = 466
Score = 1032 (368.3 bits), Expect = 3.2e-104, P = 3.2e-104
Identities = 191/338 (56%), Positives = 239/338 (70%)
Query: 2 AEVGECSASKPSRE-IWAKLEPSDSRFADVDISSNEVVICSEITSSSSDKHEWCKITRNS 60
AE G+ S SKPS + WAKL P D+RF+D++I N++VICSEI SS +KHEWC+IT+N
Sbjct: 5 AETGQSSGSKPSDDDAWAKLVPLDTRFSDIEIRCNDMVICSEIKPSSLEKHEWCRITKNL 64
Query: 61 DLHSAKMQNKSSNAILVDDTMVQNEEVVDIKCGTEIIPGPDREVYLNFRFKVVPVQESSN 120
SA + NKSS+AILVD +V + VDI G+EI+PGP+ + YL +RF ++P ES
Sbjct: 65 GQSSATIHNKSSDAILVDKAVVPKDGAVDIISGSEIVPGPEEQGYLQYRFTIMPAPESRT 124
Query: 121 QQLEISIDIEHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPHCRA 180
Q L+ISID EHAKC ICLNIWHDVVT APCLHNFCNGCFSEW+RRS+EK VLCP CR
Sbjct: 125 QLLQISIDPEHAKCSICLNIWHDVVTAAPCLHNFCNGCFSEWMRRSEEKHKHVLCPQCRT 184
Query: 181 VVQFVGRNHYLHNIEQSILQAHSSLRRSDEEVALLDSYAYIKSNLVIRNGKKHRRKRAHS 240
VQ+VG+NH+L NI++ IL+ ++LRR E++A+LDS A I+SNL+I K+ RR +
Sbjct: 185 TVQYVGKNHFLKNIQEEILKVDAALRRPAEDIAVLDSSASIQSNLII-GSKRKRRLNMPA 243
Query: 241 PIDEESDSIELPCPQCGTEINGFHCNQTTVHLQCQGCGGMMPSR-NDSVPQHCLGCDRAF 299
P EE DS+ L CPQC I G+ C HLQC C GMMP R N VP HC GCDR F
Sbjct: 244 PTHEERDSLRLQCPQCVANIGGYRCEHHGAHLQCHLCQGMMPFRANLQVPLHCKGCDRPF 303
Query: 300 CGAYWHAQMVARSDSQPMCSHETFKPISERTSLGFHFL 337
CGAYW ++ V + S P+C ETF+PISERT F+
Sbjct: 304 CGAYWSSENVTQGVSGPVCVRETFRPISERTITRIPFI 341
>UNIPROTKB|Q6P256 [details] [associations]
symbol:chfr "E3 ubiquitin-protein ligase CHFR" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000166 "nucleotide binding"
evidence=ISS] [GO:0000209 "protein polyubiquitination"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0007093
"mitotic cell cycle checkpoint" evidence=ISS] [GO:0016605 "PML
body" evidence=ISS] [GO:0019941 "modification-dependent protein
catabolic process" evidence=ISS] InterPro:IPR001841
InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 Pfam:PF13639
PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184 SMART:SM00240
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0051301 GO:GO:0007067
GO:GO:0000166 GO:GO:0046872 GO:GO:0016605 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000209 GO:GO:0007093
GO:GO:0019941 InterPro:IPR017907 CTD:55743 eggNOG:NOG253207
GeneTree:ENSGT00400000022306 HOGENOM:HOG000290186 KO:K10644
OrthoDB:EOG43FGWJ HSSP:Q96EP1 EMBL:BC064721 RefSeq:NP_989378.1
UniGene:Str.20502 ProteinModelPortal:Q6P256 SMR:Q6P256
STRING:Q6P256 Ensembl:ENSXETT00000052239 GeneID:395009
KEGG:xtr:395009 Xenbase:XB-GENE-998659 InParanoid:Q6P256
OMA:SASEPAC Bgee:Q6P256 Uniprot:Q6P256
Length = 626
Score = 190 (71.9 bits), Expect = 2.1e-17, Sum P(3) = 2.1e-17
Identities = 44/138 (31%), Positives = 67/138 (48%)
Query: 130 EHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPHCRAVVQFVGRNH 189
E C IC + HD V++ PC+H FC C+S W+ RS LCP CR V+ + +NH
Sbjct: 263 ETLTCIICQELLHDCVSLQPCMHTFCAACYSGWMERSS------LCPTCRCPVERICKNH 316
Query: 190 YLHNIEQSILQAHSSLRRSDEEVALLDSYAYIKSNLV---IRNGKKHRRKRAH-----SP 241
L+N+ ++ L H RS+E+ +D+ I +++ +R + S
Sbjct: 317 ILNNLVEAYLIQHPEKCRSEEDRCSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSD 376
Query: 242 IDEESDSIELP---CPQC 256
+D ES I P C QC
Sbjct: 377 VDSESSDISQPYTVCRQC 394
Score = 67 (28.6 bits), Expect = 2.1e-17, Sum P(3) = 2.1e-17
Identities = 22/75 (29%), Positives = 26/75 (34%)
Query: 241 PIDEESDSIELPCPQCGTEI----NGFHCNQTTVHLQCQGCGGMMPSR------NDSV-P 289
P D E+ + P T + C H+ C C MP R N V P
Sbjct: 410 PSDTEASRTQGDAPSTSTNFPTATQEYVCPSHGSHVICTCCFQPMPDRRAEREHNSHVAP 469
Query: 290 QHCLGCDRAFCGAYW 304
Q C C FC YW
Sbjct: 470 QQCTICLEPFCHMYW 484
Score = 61 (26.5 bits), Expect = 2.1e-17, Sum P(3) = 2.1e-17
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 52 EWCKITRNSDLHSAKMQNKSSNAILVDDTMVQNEEVVDIKCGTEI 96
E CKIT N + S +++ S+N +++ V ++ +K G I
Sbjct: 55 EHCKITVNEESGSVSLEDTSTNGTVINKLKVVKKQTYPLKNGDVI 99
>UNIPROTKB|Q5FWP4 [details] [associations]
symbol:chfr "E3 ubiquitin-protein ligase CHFR" species:8355
"Xenopus laevis" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0000209 "protein polyubiquitination" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISS]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=ISS]
[GO:0016605 "PML body" evidence=IDA] [GO:0019941
"modification-dependent protein catabolic process" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
Pfam:PF00498 Pfam:PF13639 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0051301 GO:GO:0007067 GO:GO:0000166 GO:GO:0046872
GO:GO:0016605 GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000209
GO:GO:0007093 GO:GO:0019941 InterPro:IPR017907 CTD:55743 KO:K10644
HSSP:Q96EP1 EMBL:BC089260 RefSeq:NP_001089240.1 UniGene:Xl.25667
ProteinModelPortal:Q5FWP4 SMR:Q5FWP4 IntAct:Q5FWP4 GeneID:734287
KEGG:xla:734287 Xenbase:XB-GENE-6251657 Uniprot:Q5FWP4
Length = 625
Score = 190 (71.9 bits), Expect = 6.8e-17, Sum P(3) = 6.8e-17
Identities = 44/138 (31%), Positives = 67/138 (48%)
Query: 130 EHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPHCRAVVQFVGRNH 189
E C IC + HD V++ PC+H FC C+S W+ RS LCP CR V+ + +NH
Sbjct: 262 ETLTCIICQELLHDCVSLQPCMHTFCAACYSGWMERSS------LCPTCRCPVERICKNH 315
Query: 190 YLHNIEQSILQAHSSLRRSDEEVALLDSYAYIKSNLV---IRNGKKHRRKRAH-----SP 241
L+N+ ++ L H RS+E+ +D+ I +++ +R + S
Sbjct: 316 ILNNLVEAYLIQHPEKCRSEEDRCSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSD 375
Query: 242 IDEESDSIELP---CPQC 256
+D ES I P C QC
Sbjct: 376 VDSESSDISQPYTVCRQC 393
Score = 67 (28.6 bits), Expect = 6.8e-17, Sum P(3) = 6.8e-17
Identities = 22/75 (29%), Positives = 26/75 (34%)
Query: 241 PIDEESDSIELPCPQCGTEI----NGFHCNQTTVHLQCQGCGGMMPSR------NDSV-P 289
P D E+ + P T + C H+ C C MP R N V P
Sbjct: 409 PSDTETSRTQGDAPSTSTNFPTATQEYVCPSHGSHVICTCCFQPMPDRRAEREHNSHVAP 468
Query: 290 QHCLGCDRAFCGAYW 304
Q C C FC YW
Sbjct: 469 QQCTICLEPFCHMYW 483
Score = 56 (24.8 bits), Expect = 6.8e-17, Sum P(3) = 6.8e-17
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 52 EWCKITRNSDLHSAKMQNKSSNAILVDDTMVQNEEVVDIKCGTEI 96
E CKIT N + +++ S+N +++ V ++ +K G I
Sbjct: 55 EHCKITVNEESGEVSLEDTSTNGTVINKLKVIRKQTYPLKNGDVI 99
>UNIPROTKB|F5GWT6 [details] [associations]
symbol:CHFR "E3 ubiquitin-protein ligase CHFR" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC127070 HGNC:HGNC:20455 ChiTaRS:CHFR
IPI:IPI00973335 ProteinModelPortal:F5GWT6 SMR:F5GWT6 PRIDE:F5GWT6
Ensembl:ENST00000541837 ArrayExpress:F5GWT6 Bgee:F5GWT6
Uniprot:F5GWT6
Length = 349
Score = 199 (75.1 bits), Expect = 7.5e-17, Sum P(2) = 7.5e-17
Identities = 45/138 (32%), Positives = 69/138 (50%)
Query: 130 EHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPHCRAVVQFVGRNH 189
E C IC ++ HD V++ PC+H FC C+S W+ RS LCP CR V+ + +NH
Sbjct: 100 ETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSS------LCPTCRCPVERICKNH 153
Query: 190 YLHNIEQSILQAHSSLRRSDEEVALLDSYAYIKSNLV---IRNGKKHRRKRAH-----SP 241
L+N+ ++ L H RS+E+V +D+ I +++ +R + S
Sbjct: 154 ILNNLVEAYLIQHPDKSRSEEDVQSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSD 213
Query: 242 IDEESDSIELP---CPQC 256
+D ES I P C QC
Sbjct: 214 VDSESSDISQPYVVCRQC 231
Score = 64 (27.6 bits), Expect = 7.5e-17, Sum P(2) = 7.5e-17
Identities = 16/54 (29%), Positives = 19/54 (35%)
Query: 258 TEINGFHCNQTTVHLQCQGCGGMMPSRNDS-------VPQHCLGCDRAFCGAYW 304
T + + C H C C MP R PQ C C + FC YW
Sbjct: 269 TAVQDYVCPLQGSHALCTCCFQPMPDRRAEREQDPRVAPQQCAVCLQPFCHLYW 322
>UNIPROTKB|Q5RF77 [details] [associations]
symbol:CHFR "E3 ubiquitin-protein ligase CHFR" species:9601
"Pongo abelii" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0000209 "protein polyubiquitination" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0007093 "mitotic cell cycle checkpoint"
evidence=ISS] [GO:0016605 "PML body" evidence=ISS] [GO:0019941
"modification-dependent protein catabolic process" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
Pfam:PF00498 Pfam:PF13639 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0051301 GO:GO:0007067 GO:GO:0000166 GO:GO:0046872
GO:GO:0016605 GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000209
GO:GO:0007093 GO:GO:0019941 InterPro:IPR017907 CTD:55743
HOGENOM:HOG000290186 KO:K10644 EMBL:CR857284 RefSeq:NP_001124696.1
UniGene:Pab.10380 HSSP:Q96EP1 ProteinModelPortal:Q5RF77 SMR:Q5RF77
PRIDE:Q5RF77 GeneID:100171543 KEGG:pon:100171543 Uniprot:Q5RF77
Length = 571
Score = 199 (75.1 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 45/138 (32%), Positives = 69/138 (50%)
Query: 130 EHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPHCRAVVQFVGRNH 189
E C IC ++ HD V++ PC+H FC C+S W+ RS LCP CR V+ + +NH
Sbjct: 208 ETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSS------LCPTCRCPVERICKNH 261
Query: 190 YLHNIEQSILQAHSSLRRSDEEVALLDSYAYIKSNLV---IRNGKKHRRKRAH-----SP 241
L+N+ ++ L H RS+E+V +D+ I +++ +R + S
Sbjct: 262 ILNNLVEAYLIQHPDKSRSEEDVQSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSD 321
Query: 242 IDEESDSIELP---CPQC 256
+D ES I P C QC
Sbjct: 322 VDSESSDISQPYVVCRQC 339
Score = 69 (29.3 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 22/70 (31%), Positives = 27/70 (38%)
Query: 242 IDEESDSIELPCPQCGTEINGFHCNQTTVHLQCQGCGGMMPSR------NDSV-PQHCLG 294
+D S S+ L T + + C H C C MP R N V PQ C
Sbjct: 366 VDAPSTSVSL------TTVQDYVCPLQGSHALCTCCFQPMPDRRAEREQNPRVAPQQCAV 419
Query: 295 CDRAFCGAYW 304
C + FC YW
Sbjct: 420 CLQPFCHLYW 429
>ZFIN|ZDB-GENE-030131-3522 [details] [associations]
symbol:chfr "checkpoint with forkhead and ring
finger domains, E3 ubiquitin protein ligase" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA;ISS] [GO:0007093 "mitotic cell cycle
checkpoint" evidence=ISS] [GO:0000209 "protein polyubiquitination"
evidence=ISS] [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0016605 "PML body" evidence=ISS] [GO:0019941
"modification-dependent protein catabolic process" evidence=ISS]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000253
InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 UniPathway:UPA00143 Prosite:PS00518
ZFIN:ZDB-GENE-030131-3522 GO:GO:0051301 GO:GO:0007067 GO:GO:0000166
GO:GO:0046872 GO:GO:0016605 GO:GO:0008270 Gene3D:2.60.200.20
SUPFAM:SSF49879 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000209 GO:GO:0007093 GO:GO:0019941 InterPro:IPR017907
EMBL:CT573109 EMBL:BC153311 IPI:IPI00854275 IPI:IPI00944855
RefSeq:NP_001093485.1 UniGene:Dr.148986 ProteinModelPortal:A5WW08
SMR:A5WW08 STRING:A5WW08 Ensembl:ENSDART00000110783
Ensembl:ENSDART00000115227 GeneID:564271 KEGG:dre:564271 CTD:55743
eggNOG:NOG253207 GeneTree:ENSGT00400000022306 HOGENOM:HOG000290186
KO:K10644 OMA:LYWGCAR OrthoDB:EOG43FGWJ NextBio:20885304
Bgee:A5WW08 Uniprot:A5WW08
Length = 637
Score = 175 (66.7 bits), Expect = 3.3e-16, Sum P(3) = 3.3e-16
Identities = 36/119 (30%), Positives = 66/119 (55%)
Query: 130 EHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPHCRAVVQFVGRNH 189
E C IC ++ +D ++V PC+H FC C+S W+ RS CP CR V+ + +NH
Sbjct: 273 ESLTCIICQDLLYDCISVQPCMHTFCAACYSGWMERSS------FCPTCRCPVERIRKNH 326
Query: 190 YLHNIEQSILQAHSSLRRSDEEVALLDSYAYIKSNLVIRNGKKHRRKRAHSPIDEESDS 248
L+N+ ++ L H R+++++ +D+ N + ++ + + +R+ S DEE+ S
Sbjct: 327 ILNNLVEAYLLQHPEKCRTEDDLRSMDA-----RNKITQDMLQPKVERSFS--DEEASS 378
Score = 89 (36.4 bits), Expect = 3.3e-16, Sum P(3) = 3.3e-16
Identities = 20/48 (41%), Positives = 21/48 (43%)
Query: 263 FHCNQTTVHLQCQGCGGMMPSRN-----DSV-PQHCLGCDRAFCGAYW 304
F C HL C C MP R V PQHCL C + FC YW
Sbjct: 448 FRCPPQASHLICTCCLQPMPDRRFEHLPPQVSPQHCLVCQKPFCHVYW 495
Score = 46 (21.3 bits), Expect = 3.3e-16, Sum P(3) = 3.3e-16
Identities = 22/125 (17%), Positives = 57/125 (45%)
Query: 10 SKPSREIWAKLEPSD-SRFADVDISSNEVVI-----CS-EITSSSSDKHEWCKITRNSDL 62
++ S + W KL D S +++ + ++E + C ++ CKIT + +
Sbjct: 3 NQDSDQAWGKLVKVDASPGSEIVLINSECTVGRKKDCDLSFPANKLVSGNHCKITHDQNS 62
Query: 63 HSAKMQNKSSNAILVDDTMVQNEEVVDIKCGTEII---PGPDREVYLNFRFKVVPVQESS 119
+++ S+N +++ + V ++ ++ G I + E + + ++ + QES+
Sbjct: 63 GKVWLEDMSTNGTVINMSKVVKKQTHLLQNGDVIYFVYRKNEPEQNIAYVYQSITPQESA 122
Query: 120 NQQLE 124
+ +E
Sbjct: 123 SHDVE 127
>UNIPROTKB|Q96EP1 [details] [associations]
symbol:CHFR "E3 ubiquitin-protein ligase CHFR" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=IMP;TAS]
[GO:0016605 "PML body" evidence=IDA] [GO:0019941
"modification-dependent protein catabolic process" evidence=IDA]
[GO:0000209 "protein polyubiquitination" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR001841 InterPro:IPR000253
InterPro:IPR008984 Pfam:PF00498 Pfam:PF13639 PROSITE:PS50006
PROSITE:PS50089 SMART:SM00184 SMART:SM00240 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0051301 GO:GO:0007067 GO:GO:0000166
GO:GO:0046872 GO:GO:0016605 GO:GO:0008270 Gene3D:2.60.200.20
SUPFAM:SSF49879 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004842 GO:GO:0000209 GO:GO:0007093 GO:GO:0019941
InterPro:IPR017907 CTD:55743 eggNOG:NOG253207 KO:K10644 OMA:LYWGCAR
OrthoDB:EOG43FGWJ EMBL:AF170724 EMBL:AK001658 EMBL:AK027687
EMBL:AK302785 EMBL:AK304333 EMBL:AC127070 EMBL:BC012072
EMBL:AL137561 IPI:IPI00023513 IPI:IPI00397548 IPI:IPI00796680
IPI:IPI00930659 IPI:IPI00953641 PIR:T46399 RefSeq:NP_001154816.1
RefSeq:NP_001154817.1 RefSeq:NP_001154818.1 RefSeq:NP_001154819.1
RefSeq:NP_060693.2 UniGene:Hs.720197 PDB:1LGP PDB:1LGQ PDB:2XOC
PDB:2XOY PDB:2XOZ PDB:2XP0 PDBsum:1LGP PDBsum:1LGQ PDBsum:2XOC
PDBsum:2XOY PDBsum:2XOZ PDBsum:2XP0 ProteinModelPortal:Q96EP1
SMR:Q96EP1 DIP:DIP-40098N IntAct:Q96EP1 MINT:MINT-1381330
STRING:Q96EP1 PhosphoSite:Q96EP1 DMDM:41688511 PRIDE:Q96EP1
DNASU:55743 Ensembl:ENST00000315585 Ensembl:ENST00000432561
Ensembl:ENST00000443047 Ensembl:ENST00000450056 GeneID:55743
KEGG:hsa:55743 UCSC:uc001uld.2 UCSC:uc001ule.2 UCSC:uc001ulf.2
UCSC:uc010tbs.1 UCSC:uc010tbt.1 GeneCards:GC12M133416
HGNC:HGNC:20455 MIM:605209 neXtProt:NX_Q96EP1 PharmGKB:PA134898949
HOVERGEN:HBG048005 InParanoid:Q96EP1 ChiTaRS:CHFR
EvolutionaryTrace:Q96EP1 GenomeRNAi:55743 NextBio:60707
ArrayExpress:Q96EP1 Bgee:Q96EP1 CleanEx:HS_CHFR
Genevestigator:Q96EP1 GermOnline:ENSG00000072609 Uniprot:Q96EP1
Length = 664
Score = 199 (75.1 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 45/138 (32%), Positives = 69/138 (50%)
Query: 130 EHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPHCRAVVQFVGRNH 189
E C IC ++ HD V++ PC+H FC C+S W+ RS LCP CR V+ + +NH
Sbjct: 300 ETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSS------LCPTCRCPVERICKNH 353
Query: 190 YLHNIEQSILQAHSSLRRSDEEVALLDSYAYIKSNLV---IRNGKKHRRKRAH-----SP 241
L+N+ ++ L H RS+E+V +D+ I +++ +R + S
Sbjct: 354 ILNNLVEAYLIQHPDKSRSEEDVQSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSD 413
Query: 242 IDEESDSIELP---CPQC 256
+D ES I P C QC
Sbjct: 414 VDSESSDISQPYVVCRQC 431
Score = 64 (27.6 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 16/54 (29%), Positives = 19/54 (35%)
Query: 258 TEINGFHCNQTTVHLQCQGCGGMMPSRNDS-------VPQHCLGCDRAFCGAYW 304
T + + C H C C MP R PQ C C + FC YW
Sbjct: 469 TAVQDYVCPLQGSHALCTCCFQPMPDRRAEREQDPRVAPQQCAVCLQPFCHLYW 522
>RGD|1306360 [details] [associations]
symbol:Chfr "checkpoint with forkhead and ring finger domains,
E3 ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=ISO] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000278 "mitotic cell cycle"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=ISO]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016605 "PML
body" evidence=ISO] [GO:0019941 "modification-dependent protein
catabolic process" evidence=ISO] InterPro:IPR001841
InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 Pfam:PF13639
PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184 SMART:SM00240
RGD:1306360 Prosite:PS00518 GO:GO:0000166 GO:GO:0046872
GO:GO:0016605 GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879
EMBL:CH473973 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004842 GO:GO:0000209 GO:GO:0007093 GO:GO:0019941
InterPro:IPR017907 CTD:55743 eggNOG:NOG253207 HOGENOM:HOG000290186
KO:K10644 OrthoDB:EOG43FGWJ HOVERGEN:HBG048005 IPI:IPI00190180
EMBL:BC087162 RefSeq:NP_001009258.1 UniGene:Rn.15515 SMR:Q5PQJ8
STRING:Q5PQJ8 GeneID:288734 KEGG:rno:288734 UCSC:RGD:1306360
InParanoid:Q5PQJ8 NextBio:628621 Genevestigator:Q5PQJ8
Uniprot:Q5PQJ8
Length = 663
Score = 218 (81.8 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 72/269 (26%), Positives = 119/269 (44%)
Query: 44 TSSSSDKHEWCKITRNSDLHSAKMQNKSSNAILVDDTMVQNEEVVDIKCGTEIIPGPDRE 103
T S S K E + N +L S + + A ++++ E+ +++ + + G D E
Sbjct: 210 TISISPK-ECSSLVANGELSSLSSVFQDNEASF---SLLKTEDTEELEPAKKKMKG-DGE 264
Query: 104 VYLNFRFKVVP----VQESSNQQLEISIDIEHAK----CCICLNIWHDVVTVAPCLHNFC 155
+ LN + V Q SS + S+ + + C IC ++ HD V++ PC+H FC
Sbjct: 265 LDLNLQLSVADQRGIAQTSSEDVKDASVKPDKMEETLTCIICQDLLHDCVSLQPCMHTFC 324
Query: 156 NGCFSEWLRRSQEKRSTVLCPHCRAVVQFVGRNHYLHNIEQSILQAHSSLRRSDEEVALL 215
C+S W+ RS LCP CR V+ + +NH L+N+ ++ L H RS+E+V +
Sbjct: 325 AACYSGWMERSS------LCPTCRCPVERICKNHILNNLVEAYLLQHPDKSRSEEDVRSM 378
Query: 216 DSYAYIKSNLV---IRNGKKHRRKRAH-----SPIDEESDSIELP---CPQCGT----EI 260
D+ I +++ +R + S +D ES I P C QC +
Sbjct: 379 DARNKITQDMLQPKVRRSFSDEEGSSEDLLELSDVDSESSDISQPYIVCRQCPEYRRQAV 438
Query: 261 NGFHCNQTTVHLQC-QGCGGMMPSRNDSV 288
C L Q GG PS + S+
Sbjct: 439 QSLPCPVPESELGATQALGGEAPSTSASL 467
>UNIPROTKB|F1LN16 [details] [associations]
symbol:Chfr "Protein Chfr" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0000278
"mitotic cell cycle" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016605 "PML body" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
Pfam:PF00498 Pfam:PF13639 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 RGD:1306360 Prosite:PS00518
GO:GO:0000166 GO:GO:0046872 GO:GO:0016605 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842 GO:GO:0000209
InterPro:IPR017907 GO:GO:0000278 GeneTree:ENSGT00400000022306
OMA:LYWGCAR IPI:IPI00190180 Ensembl:ENSRNOT00000056639
ArrayExpress:F1LN16 Uniprot:F1LN16
Length = 664
Score = 218 (81.8 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 72/269 (26%), Positives = 119/269 (44%)
Query: 44 TSSSSDKHEWCKITRNSDLHSAKMQNKSSNAILVDDTMVQNEEVVDIKCGTEIIPGPDRE 103
T S S K E + N +L S + + A ++++ E+ +++ + + G D E
Sbjct: 210 TISISPK-ECSSLVANGELSSLSSVFQDNEASF---SLLKTEDTEELEPAKKKMKG-DGE 264
Query: 104 VYLNFRFKVVP----VQESSNQQLEISIDIEHAK----CCICLNIWHDVVTVAPCLHNFC 155
+ LN + V Q SS + S+ + + C IC ++ HD V++ PC+H FC
Sbjct: 265 LDLNLQLSVADQRGIAQTSSEDVKDASVKPDKMEETLTCIICQDLLHDCVSLQPCMHTFC 324
Query: 156 NGCFSEWLRRSQEKRSTVLCPHCRAVVQFVGRNHYLHNIEQSILQAHSSLRRSDEEVALL 215
C+S W+ RS LCP CR V+ + +NH L+N+ ++ L H RS+E+V +
Sbjct: 325 AACYSGWMERSS------LCPTCRCPVERICKNHILNNLVEAYLLQHPDKSRSEEDVRSM 378
Query: 216 DSYAYIKSNLV---IRNGKKHRRKRAH-----SPIDEESDSIELP---CPQCGT----EI 260
D+ I +++ +R + S +D ES I P C QC +
Sbjct: 379 DARNKITQDMLQPKVRRSFSDEEGSSEDLLELSDVDSESSDISQPYIVCRQCPEYRRQAV 438
Query: 261 NGFHCNQTTVHLQC-QGCGGMMPSRNDSV 288
C L Q GG PS + S+
Sbjct: 439 QSLPCPVPESELGATQALGGEAPSTSASL 467
>UNIPROTKB|E1BBP0 [details] [associations]
symbol:CHFR "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016605 "PML body" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000278 "mitotic cell cycle" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
Pfam:PF00498 Pfam:PF13639 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 Prosite:PS00518 GO:GO:0000166
GO:GO:0046872 GO:GO:0016605 GO:GO:0008270 Gene3D:2.60.200.20
SUPFAM:SSF49879 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004842 GO:GO:0000209 InterPro:IPR017907 GO:GO:0000278
CTD:55743 GeneTree:ENSGT00400000022306 KO:K10644 OMA:LYWGCAR
EMBL:DAAA02044944 IPI:IPI00692825 RefSeq:NP_001192403.1
UniGene:Bt.45882 ProteinModelPortal:E1BBP0
Ensembl:ENSBTAT00000018544 GeneID:614816 KEGG:bta:614816
NextBio:20899304 Uniprot:E1BBP0
Length = 663
Score = 195 (73.7 bits), Expect = 2.9e-15, Sum P(3) = 2.9e-15
Identities = 45/122 (36%), Positives = 68/122 (55%)
Query: 130 EHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPHCRAVVQFVGRNH 189
E C IC ++ HD V++ PC+H FC C+S W+ RS LCP CR V+ + +NH
Sbjct: 300 ETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERS------ALCPTCRCPVERICKNH 353
Query: 190 YLHNIEQSILQAHSSLRRSDEEVALLDSYAYIKSNLVIRNGKKHRRKRAHSPIDEESDSI 249
L+N+ ++ L H RRS+E+ L S A N + ++ + + +RA S DEE S
Sbjct: 354 ILNNLVEAYLLQHPDKRRSEED---LRSMA--ARNKITQDMLQPKVRRAFS--DEEGSSE 406
Query: 250 EL 251
+L
Sbjct: 407 DL 408
Score = 58 (25.5 bits), Expect = 2.9e-15, Sum P(3) = 2.9e-15
Identities = 16/54 (29%), Positives = 18/54 (33%)
Query: 258 TEINGFHCNQTTVHLQCQGCGGMMPSRNDS-------VPQHCLGCDRAFCGAYW 304
T + C H C C MP R PQ C C + FC YW
Sbjct: 468 TAAQDYVCALQGSHAICTCCFQPMPDRRAERERDPRIAPQQCAICLQPFCHLYW 521
Score = 44 (20.5 bits), Expect = 2.9e-15, Sum P(3) = 2.9e-15
Identities = 9/43 (20%), Positives = 21/43 (48%)
Query: 54 CKITRNSDLHSAKMQNKSSNAILVDDTMVQNEEVVDIKCGTEI 96
CKIT + +++ S+N +++ V ++ ++ G I
Sbjct: 61 CKITVDEKSGQVSLEDTSANGTVINKLKVVKKQTCPLQTGDVI 103
Score = 37 (18.1 bits), Expect = 4.0e-13, Sum P(3) = 4.0e-13
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 292 CLGCDRAFC 300
CLGC FC
Sbjct: 528 CLGCLAPFC 536
>UNIPROTKB|F1NVB6 [details] [associations]
symbol:F1NVB6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016605 "PML body" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
Pfam:PF00498 Pfam:PF13639 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 Prosite:PS00518 GO:GO:0000166
GO:GO:0046872 GO:GO:0016605 GO:GO:0008270 Gene3D:2.60.200.20
SUPFAM:SSF49879 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004842 GO:GO:0000209 InterPro:IPR017907 GO:GO:0000278
GeneTree:ENSGT00400000022306 OMA:LYWGCAR EMBL:AADN02034798
IPI:IPI00597975 Ensembl:ENSGALT00000003414 Uniprot:F1NVB6
Length = 662
Score = 190 (71.9 bits), Expect = 3.9e-15, Sum P(3) = 3.9e-15
Identities = 43/138 (31%), Positives = 68/138 (49%)
Query: 130 EHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPHCRAVVQFVGRNH 189
E C IC + HD V++ PC+H FC C+S W+ RS LCP CR V+ + +NH
Sbjct: 292 ETLTCIICQELLHDCVSLQPCMHTFCAACYSGWMERSS------LCPTCRCPVERICKNH 345
Query: 190 YLHNIEQSILQAHSSLRRSDEEVALLDSYAYIKSNLV---IRNGKKHRRKRAH-----SP 241
L+N+ ++ L H R++++V +D+ I +++ +R + S
Sbjct: 346 ILNNLVEAYLIQHPDKCRNEDDVRSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSD 405
Query: 242 IDEESDSIELP---CPQC 256
+D ES I P C QC
Sbjct: 406 VDSESSDISQPYIVCRQC 423
Score = 66 (28.3 bits), Expect = 3.9e-15, Sum P(3) = 3.9e-15
Identities = 20/67 (29%), Positives = 25/67 (37%)
Query: 260 INGFHCNQTTVHLQCQGCGGMMPSR------NDSV-PQHCLGCDRAFCGAYWHA-QMVAR 311
+ + C H+ C C MP R N V PQ C C + FC YW +M
Sbjct: 469 VQEYVCPAQGSHVICTCCFQPMPDRRAEREQNPHVAPQQCTVCLQPFCHLYWGCTRMACF 528
Query: 312 SDSQPMC 318
P C
Sbjct: 529 GCLAPFC 535
Score = 41 (19.5 bits), Expect = 3.9e-15, Sum P(3) = 3.9e-15
Identities = 8/43 (18%), Positives = 21/43 (48%)
Query: 54 CKITRNSDLHSAKMQNKSSNAILVDDTMVQNEEVVDIKCGTEI 96
CKI + + +++ S+N +++ V ++ ++ G I
Sbjct: 49 CKIIVDEESGQVSLEDTSTNGTVINKLKVVKKQTYPLQTGDVI 91
>UNIPROTKB|F1RI73 [details] [associations]
symbol:CHFR "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016605 "PML body" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000278 "mitotic cell cycle" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
Pfam:PF00498 Pfam:PF13639 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 Prosite:PS00518 GO:GO:0000166
GO:GO:0046872 GO:GO:0016605 GO:GO:0008270 Gene3D:2.60.200.20
SUPFAM:SSF49879 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004842 GO:GO:0000209 InterPro:IPR017907 GO:GO:0000278
GeneTree:ENSGT00400000022306 OMA:LYWGCAR EMBL:CU468405
Ensembl:ENSSSCT00000010670 Uniprot:F1RI73
Length = 664
Score = 189 (71.6 bits), Expect = 9.4e-14, Sum P(2) = 9.4e-14
Identities = 42/122 (34%), Positives = 67/122 (54%)
Query: 130 EHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPHCRAVVQFVGRNH 189
E C IC ++ HD V++ PC+H FC C+S W+ RS LCP CR V+ + +NH
Sbjct: 300 ETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERS------TLCPTCRCPVERICKNH 353
Query: 190 YLHNIEQSILQAHSSLRRSDEEVALLDSYAYIKSNLVIRNGKKHRRKRAHSPIDEESDSI 249
L+N+ ++ L H RS+E+V + + N + ++ + + +RA S DEE S
Sbjct: 354 ILNNLVEAYLLQHPDKGRSEEDVRSMAA-----RNKITQDMLQPKVRRAFS--DEEGSSE 406
Query: 250 EL 251
+L
Sbjct: 407 DL 408
Score = 59 (25.8 bits), Expect = 9.4e-14, Sum P(2) = 9.4e-14
Identities = 16/54 (29%), Positives = 18/54 (33%)
Query: 258 TEINGFHCNQTTVHLQCQGCGGMMPSRNDS-------VPQHCLGCDRAFCGAYW 304
T + C H C C MP R PQ C C + FC YW
Sbjct: 469 TATQDYVCALQGSHAICTCCFQPMPDRRAERERDPRIAPQQCAVCLQPFCHLYW 522
Score = 37 (18.1 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 292 CLGCDRAFC 300
CLGC FC
Sbjct: 529 CLGCLAPFC 537
>MGI|MGI:2444898 [details] [associations]
symbol:Chfr "checkpoint with forkhead and ring finger
domains" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=ISO] [GO:0000209 "protein polyubiquitination"
evidence=ISO;IDA] [GO:0000278 "mitotic cell cycle" evidence=IMP]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007093 "mitotic cell cycle
checkpoint" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IMP]
[GO:0016605 "PML body" evidence=ISO] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0019941 "modification-dependent protein catabolic
process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
Pfam:PF00498 Pfam:PF13639 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 UniPathway:UPA00143 MGI:MGI:2444898
Prosite:PS00518 GO:GO:0051301 GO:GO:0007067 GO:GO:0000166
GO:GO:0046872 GO:GO:0016605 GO:GO:0008270 EMBL:CH466529
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842 GO:GO:0000209
GO:GO:0007093 InterPro:IPR017907 CTD:55743 eggNOG:NOG253207
GeneTree:ENSGT00400000022306 KO:K10644 OMA:LYWGCAR
HOVERGEN:HBG048005 ChiTaRS:CHFR EMBL:AK052473 EMBL:AK077629
EMBL:AK147892 EMBL:AK154038 EMBL:AK155295 EMBL:AK155525
EMBL:AK169182 EMBL:AK169193 EMBL:BC049792 IPI:IPI00336194
IPI:IPI00400444 IPI:IPI00653343 IPI:IPI00944802 RefSeq:NP_766305.2
UniGene:Mm.30264 ProteinModelPortal:Q810L3 SMR:Q810L3 STRING:Q810L3
PhosphoSite:Q810L3 PRIDE:Q810L3 Ensembl:ENSMUST00000014812
Ensembl:ENSMUST00000112519 GeneID:231600 KEGG:mmu:231600
UCSC:uc008ypv.2 UCSC:uc008ypw.2 UCSC:uc008ypx.2 UCSC:uc008ypz.2
InParanoid:Q3TFD8 NextBio:380643 Bgee:Q810L3 CleanEx:MM_CHFR
Genevestigator:Q810L3 GermOnline:ENSMUSG00000014668 Uniprot:Q810L3
Length = 664
Score = 203 (76.5 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 53/176 (30%), Positives = 80/176 (45%)
Query: 130 EHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPHCRAVVQFVGRNH 189
E C IC ++ HD V++ PC+H FC C+S W+ RS LCP CR V+ + +NH
Sbjct: 299 ETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSS------LCPTCRCPVERICKNH 352
Query: 190 YLHNIEQSILQAHSSLRRSDEEVALLDSYAYIKSNLV---IRNGKKHRRKRAH-----SP 241
L+N+ ++ L H RS+E+V +D+ I +++ +R + S
Sbjct: 353 ILNNLVEAYLIQHPDKSRSEEDVRSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSD 412
Query: 242 IDEESDSIELP---CPQCGT----EINGFHCNQTTVHLQCQ-GCGGMMPSRNDSVP 289
+D ES I P C QC + C L GG PS + S+P
Sbjct: 413 VDSESSDISQPYIVCRQCPEYRRQAVQSLPCPVPESELGATLALGGEAPSTSASLP 468
Score = 40 (19.1 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 9/44 (20%), Positives = 23/44 (52%)
Query: 54 CKITRNSDLHSAKMQNKSSNAILVDDTMVQNEEVVDIKCGTEII 97
CK+T + +++ S+N +++ V ++ ++ G +II
Sbjct: 61 CKLTVDEISGEVTLEDTSTNGTVINKLQVVKKQTYPLQSG-DII 103
>UNIPROTKB|E2QUI8 [details] [associations]
symbol:CHFR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
Pfam:PF00498 Pfam:PF13639 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 CTD:55743
GeneTree:ENSGT00400000022306 KO:K10644 OMA:LYWGCAR
EMBL:AAEX03014572 EMBL:AAEX03014573 RefSeq:XP_534631.3
Ensembl:ENSCAFT00000009830 GeneID:477434 KEGG:cfa:477434
Uniprot:E2QUI8
Length = 661
Score = 185 (70.2 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 42/138 (30%), Positives = 67/138 (48%)
Query: 130 EHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPHCRAVVQFVGRNH 189
E C IC ++ HD V++ PC+H FC C+S W+ RS CP CR V+ + +NH
Sbjct: 298 ETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERS------TWCPTCRCPVERICKNH 351
Query: 190 YLHNIEQSILQAHSSLRRSDEEVALLDSYAYIKSNLV---IRNGKKHRRKRAH-----SP 241
L+N+ ++ L H RS+E+V + + I +++ +R + S
Sbjct: 352 ILNNLVEAYLLQHPDKSRSEEDVRSMAARNKITQDMLQPKVRRSFSDEEGSSEDLLELSD 411
Query: 242 IDEESDSIELP---CPQC 256
+D ES + P C QC
Sbjct: 412 VDSESSDVSQPYIVCRQC 429
Score = 57 (25.1 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 14/41 (34%), Positives = 15/41 (36%)
Query: 271 HLQCQGCGGMMPSRNDS-------VPQHCLGCDRAFCGAYW 304
H C C MP R PQ C C + FC YW
Sbjct: 479 HAICTCCFQPMPDRRAEREQDPRIAPQQCAVCLQPFCHLYW 519
Score = 39 (18.8 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 17/80 (21%), Positives = 37/80 (46%)
Query: 54 CKITRNSDLHSAKMQNKSSNAILVDDTMVQNEEVVDIKCGTEIIPGPDREVYLNFR---- 109
CKI + +++ S+N +++ V ++ ++ G ++I YL +R
Sbjct: 61 CKIIVDEKSGQVSLEDTSTNGTVINKLKVVKKQTCPLQTG-DVI-------YLVYRKNEP 112
Query: 110 -FKVVPVQESSNQQLEISID 128
V + ES N++ +I+ D
Sbjct: 113 EHNVAYLYESLNEKQDITQD 132
Score = 37 (18.1 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 292 CLGCDRAFC 300
CLGC FC
Sbjct: 526 CLGCLAPFC 534
>UNIPROTKB|J3KN56 [details] [associations]
symbol:CHFR "E3 ubiquitin-protein ligase CHFR" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
Pfam:PF00498 Pfam:PF13639 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC127070 HGNC:HGNC:20455
ChiTaRS:CHFR ProteinModelPortal:J3KN56 Ensembl:ENST00000266880
Uniprot:J3KN56
Length = 663
Score = 198 (74.8 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 45/138 (32%), Positives = 69/138 (50%)
Query: 130 EHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPHCRAVVQFVGRNH 189
E C IC ++ HD V++ PC+H FC C+S W+ RS LCP CR V+ + +NH
Sbjct: 300 ETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSS------LCPTCRCPVERICKNH 353
Query: 190 YLHNIEQSILQAHSSLRRSDEEVALLDSYAYIKSNLV---IRNGKKHRRKRAH-----SP 241
L+N+ ++ L H RS+E+V +D+ I +++ +R + S
Sbjct: 354 ILNNLVEAYLIQHPGNSRSEEDVQSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSD 413
Query: 242 IDEESDSIELP---CPQC 256
+D ES I P C QC
Sbjct: 414 VDSESSDISQPYVVCRQC 431
>DICTYBASE|DDB_G0279263 [details] [associations]
symbol:DDB_G0279263 "E3 ubiquitin-protein ligase
CHFR" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000253
InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 dictyBase:DDB_G0279263 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AAFI02000030
InterPro:IPR017907 eggNOG:NOG253207 RefSeq:XP_641760.1
ProteinModelPortal:Q54X17 EnsemblProtists:DDB0205685 GeneID:8621958
KEGG:ddi:DDB_G0279263 InParanoid:Q54X17 OMA:HICEQTK Uniprot:Q54X17
Length = 742
Score = 171 (65.3 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 49/206 (23%), Positives = 91/206 (44%)
Query: 46 SSSDKHEWCKITRNSDLHSAKMQNKSSNAILVDDTMVQNEEVVDIKCGTEIIPGPDREVY 105
S SD+++ K T N+ + + + N ++ N + T P D
Sbjct: 318 SMSDENDSKKSTTNTTTTTTTTTSSTDNN---NNKNNNNNNNNNNNTNTPTKPNNDNNNN 374
Query: 106 LNFRFKVVPVQESSNQQLEISIDI-EHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLR 164
+ ++ ++++I I E+ C IC +I + +T+ PC+HNFC C+ +W
Sbjct: 375 TPTKTTTTTTTTATKKEIDIEETIGENLICGICQDIIYKCLTLIPCMHNFCVCCYGDWRA 434
Query: 165 RSQEKRSTVLCPHCRAVVQFVGRNHYLHNIEQSILQAHSSLRRSDEEVALLDSYAYIKSN 224
S + CP CR V+ +NH ++N+ + L+ + R EE+ +D I
Sbjct: 435 NSMD------CPQCRQSVKSAQKNHAINNLIELYLKKNPEKVRDPEELESMDKRCKITDE 488
Query: 225 LVIRNGKKHRRKRAHSPIDEESDSIE 250
+ ++NG ++ R + DE D E
Sbjct: 489 M-LKNGSLNKSSRKYDN-DEYEDEDE 512
Score = 69 (29.3 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 17/52 (32%), Positives = 22/52 (42%)
Query: 253 CPQCGTEINGFHCNQTTVHLQCQGCGGMMPSRN-DSVPQHCLGCDRAFCGAY 303
CP+ + N + QT HL C C + P + V C C AFC Y
Sbjct: 550 CPE--SPANATYATQTK-HLNCSNCYKIFPKEPVEPVGIRCGFCHNAFCNLY 598
Score = 37 (18.1 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 280 MMPSRNDSVPQHCLGCDRAF 299
+MP+ S CLGC F
Sbjct: 669 IMPTSPCSEQYRCLGCASHF 688
>ZFIN|ZDB-GENE-070912-318 [details] [associations]
symbol:ftr27 "finTRIM family, member 27"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-070912-318 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:KOG2177 OrthoDB:EOG4R23TJ
GeneTree:ENSGT00670000097622 HOVERGEN:HBG106862 EMBL:BX548047
IPI:IPI00862890 UniGene:Dr.88749 Ensembl:ENSDART00000135584
OMA:YESHEES Uniprot:B0S6S1
Length = 171
Score = 110 (43.8 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 122 QLEISIDIEHAKCCICLNIWHDVVTVAPCLHNFCNGCFSE-WLRRSQEKRSTVLCPHCR 179
+ IS+ + C ICL++ D VT+ PC H++C C +E W RR S CP CR
Sbjct: 3 EASISVAQDQFSCSICLDLLKDPVTI-PCGHSYCMNCITEYWNRRDLSINS---CPQCR 57
Score = 47 (21.6 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 272 LQCQGCGGMMPSRNDSVPQHCLGCDRAFCGAYWHAQMVARS 312
++C C G R + CL C ++C ++ + +RS
Sbjct: 99 VECDVCNG----RKRKAVKSCLVCLESYCQCHYESHEESRS 135
>UNIPROTKB|Q2YDF9 [details] [associations]
symbol:PCGF1 "Polycomb group RING finger protein 1"
species:9913 "Bos taurus" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519 HSSP:P25916
HOVERGEN:HBG052826 eggNOG:NOG277991 HOGENOM:HOG000231946
EMBL:BC110242 IPI:IPI00687683 RefSeq:NP_001039912.2
UniGene:Bt.52040 ProteinModelPortal:Q2YDF9 GeneID:539040
KEGG:bta:539040 CTD:84759 InParanoid:Q2YDF9 KO:K11487
OrthoDB:EOG4894N6 NextBio:20877740 Uniprot:Q2YDF9
Length = 259
Score = 126 (49.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 29/105 (27%), Positives = 50/105 (47%)
Query: 110 FKVVPVQESSNQQLEISIDIEHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEK 169
+K+ P++ +++I EH CC+C + D T+ CLH FC C ++L+ S+
Sbjct: 23 YKMDPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSK-- 80
Query: 170 RSTVLCPHCRAVVQFVGR--NHYLHNIEQSIL-QAHSSLRRSDEE 211
CP C + NH L + Q I+ + L+ S+E+
Sbjct: 81 ----YCPMCNIKIHETQPLLNHKLDRVMQDIVYKLVPGLQDSEEK 121
>ZFIN|ZDB-GENE-070912-229 [details] [associations]
symbol:ftr07 "finTRIM family, member 7"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070912-229 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
EMBL:BX572635 GeneTree:ENSGT00670000097622 IPI:IPI00482574
RefSeq:XP_698750.3 UniGene:Dr.152968 Ensembl:ENSDART00000022008
GeneID:570209 KEGG:dre:570209 CTD:570209 NextBio:20890028
Uniprot:F1R523
Length = 541
Score = 133 (51.9 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 42/146 (28%), Positives = 64/146 (43%)
Query: 126 SIDIEHAKCCICLNIWHDVVTVAPCLHNFCNGCFSE-WLRRSQEKRSTVLCPHCRAVVQ- 183
S+ + C +CL++ D VT+ PC H++C C S+ W E+ CPHCR
Sbjct: 7 SLAQDQFSCSVCLDLLKDPVTI-PCGHSYCMSCISDCW--DQDEQNGVYSCPHCRQTFTP 63
Query: 184 --FVGRNHYLHNIEQSILQAHSSLRRSDEEVALL--DSYAYIKSNLVI----------RN 229
+G+N L + + + L+ D E + + Y +KS LV R+
Sbjct: 64 RPVLGKNTMLTEVVEK--PKKTKLQAEDVECDICCGEKYKAVKSCLVCLDSYCQTHFDRH 121
Query: 230 GKKHRRKRAHSPIDEESDSIELPCPQ 255
+ H RKR H D E+ CPQ
Sbjct: 122 EELHSRKR-HKVTDATGRLQEMICPQ 146
Score = 38 (18.4 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 307 QMVARSDSQPMC------SHETFK---PISERTSLGFHFLRT 339
+M R+D + +C H+T K P ER HF T
Sbjct: 152 EMYCRTDQRCICILCLMNEHKTHKTALPAEERAEKQKHFKET 193
>WB|WBGene00008588 [details] [associations]
symbol:F08G12.5 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 EMBL:Z66561
PIR:T20590 RefSeq:NP_509890.2 UniGene:Cel.23669
ProteinModelPortal:Q19214 SMR:Q19214 EnsemblMetazoa:F08G12.5
GeneID:184211 KEGG:cel:CELE_F08G12.5 UCSC:F08G12.5 CTD:184211
WormBase:F08G12.5 eggNOG:NOG313410 HOGENOM:HOG000021081
InParanoid:Q19214 OMA:EYYNYVA NextBio:923930 Uniprot:Q19214
Length = 185
Score = 118 (46.6 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 30/93 (32%), Positives = 49/93 (52%)
Query: 127 IDIEHAKCCICLNIWHDVVTVAPCLHNFCNGCF-----SEWLRRSQE-KRSTVLCPHCRA 180
+D+E +C +CLNI+ + C H+FC+ C SE + ++E R++ CP CR
Sbjct: 33 VDVETLRCAVCLNIFQGIPQTLTCGHSFCHRCIEEVAHSEVMNDTREPNRNSFHCPICRK 92
Query: 181 VVQF--VGRNHYLHNIEQSILQAHSSLRRSDEE 211
V V +N+ L N+ SI + L R +E+
Sbjct: 93 RVSMSKVIQNYTLKNVLDSI----NELSREEEK 121
>UNIPROTKB|C9J3G7 [details] [associations]
symbol:PCGF3 "Polycomb group RING finger protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC139887 HOGENOM:HOG000231946
HGNC:HGNC:10066 ChiTaRS:PCGF3 EMBL:AC107464 IPI:IPI00878168
ProteinModelPortal:C9J3G7 SMR:C9J3G7 STRING:C9J3G7
Ensembl:ENST00000433814 ArrayExpress:C9J3G7 Bgee:C9J3G7
Uniprot:C9J3G7
Length = 109
Score = 105 (42.0 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 27/92 (29%), Positives = 43/92 (46%)
Query: 128 DIE-HAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPHCRAVV---- 182
DI H C +C D TV CLH FC C ++L E+ +T CP CR V+
Sbjct: 10 DINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL----EENNT--CPTCRIVIHQSH 63
Query: 183 --QFVGRNHYLHNIEQSILQA--HSSLRRSDE 210
Q++G + + +I ++ + +R+ E
Sbjct: 64 PLQYIGHDRTMQDIVYKLVPGLQEAEMRKQRE 95
>ZFIN|ZDB-GENE-070912-225 [details] [associations]
symbol:ftr03 "finTRIM family, member 3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-070912-225 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
eggNOG:KOG2177 EMBL:BX572635 OrthoDB:EOG4R23TJ
GeneTree:ENSGT00670000097622 HOVERGEN:HBG106862 IPI:IPI00868407
Ensembl:ENSDART00000143094 OMA:ACEESIQ Uniprot:B0S723
Length = 276
Score = 118 (46.6 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 41/144 (28%), Positives = 64/144 (44%)
Query: 125 ISIDIEHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPHCRAVVQ- 183
+S + C ICL++ D V + PC H++C C S++ + E R CP CR
Sbjct: 7 VSFAQDQFNCSICLDLLKDPVAI-PCGHSYCMSCISDYWDQD-EWRGVYSCPQCRQTFTP 64
Query: 184 --FVGRNHYLHNIEQSILQAHSSLRRSDEEVALLDSYAYIKSNLVI----------RNGK 231
+G+N L + ++I + L+ D E + A +KS LV ++ +
Sbjct: 65 RPALGKNTMLTEVVENIRKR--KLQAGDVECDVCIGKA-VKSCLVCLESYCQTHFEQHEE 121
Query: 232 KHRRKRAHSPIDEESDSIELPCPQ 255
H RKR H D E+ CPQ
Sbjct: 122 FHSRKR-HKVTDANGRLQEMICPQ 144
Score = 40 (19.1 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 307 QMVARSDSQPMC---------SHETFKPISERTSLGFHF 336
+M R+D + +C +HET P ER HF
Sbjct: 150 EMYCRTDQRCICMLCLMNEHKTHETVLPAEERAEKQKHF 188
>UNIPROTKB|Q14258 [details] [associations]
symbol:TRIM25 "E3 ubiquitin/ISG15 ligase TRIM25"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0032480
"negative regulation of type I interferon production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0030054 "cell junction" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005829
GO:GO:0005634 Reactome:REACT_6900 GO:GO:0019048 GO:GO:0046872
GO:GO:0030054 GO:GO:0008270 GO:GO:0045087 GO:GO:0003700
GO:GO:0051607 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
GO:GO:0032480 InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407
SMART:SM00589 EMBL:D21205 EMBL:AC015912 EMBL:BC016924 EMBL:BC042541
IPI:IPI00029629 PIR:A49656 RefSeq:NP_005073.2 UniGene:Hs.528952
ProteinModelPortal:Q14258 SMR:Q14258 IntAct:Q14258 STRING:Q14258
PhosphoSite:Q14258 DMDM:12585547 PaxDb:Q14258 PeptideAtlas:Q14258
PRIDE:Q14258 Ensembl:ENST00000316881 Ensembl:ENST00000537230
GeneID:7706 KEGG:hsa:7706 UCSC:uc002iut.3 CTD:7706
GeneCards:GC17M054965 HGNC:HGNC:12932 HPA:HPA005909 MIM:600453
neXtProt:NX_Q14258 PharmGKB:PA37519 eggNOG:NOG253760
HOVERGEN:HBG101063 InParanoid:Q14258 KO:K10652 OMA:SHINGAT
OrthoDB:EOG42JNRQ PhylomeDB:Q14258 ChiTaRS:TRIM25 GenomeRNAi:7706
NextBio:29876 ArrayExpress:Q14258 Bgee:Q14258 CleanEx:HS_TRIM25
Genevestigator:Q14258 GermOnline:ENSG00000121060 Uniprot:Q14258
Length = 630
Score = 126 (49.4 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 31/76 (40%), Positives = 39/76 (51%)
Query: 130 EHAKCCICLNIWHDVVTVAPCLHNFCNGCFSE-WLRRSQEKRSTVLCPHCRAVVQF---V 185
E C ICL + + VT PC HNFC C +E W + S LCP CRAV Q +
Sbjct: 9 EELSCSICLEPFKEPVTT-PCGHNFCGSCLNETWAVQG----SPYLCPQCRAVYQARPQL 63
Query: 186 GRNHYLHNIEQSILQA 201
+N L N+ + LQA
Sbjct: 64 HKNTVLCNVVEQFLQA 79
>UNIPROTKB|D6RAS2 [details] [associations]
symbol:TRIM60 "Tripartite motif-containing protein 60"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000234133 HGNC:HGNC:21162
EMBL:AC106872 IPI:IPI00967237 ProteinModelPortal:D6RAS2 SMR:D6RAS2
Ensembl:ENST00000507119 ArrayExpress:D6RAS2 Bgee:D6RAS2
Uniprot:D6RAS2
Length = 90
Score = 101 (40.6 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 29/82 (35%), Positives = 37/82 (45%)
Query: 130 EHAKCCICLNIWHDVVTVAPCLHNFCNGCFS-EWLRRSQEKRSTVLCPHCRAVVQFVG-- 186
E + C ICL D VT+ C HNFC C S W ++ T CP CR +
Sbjct: 12 EESSCPICLEYLKDPVTIN-CGHNFCRSCLSVSW----KDLDDTFPCPVCRFCFPYKSFR 66
Query: 187 RNHYLHNIEQSILQAHSSLRRS 208
RN L N+ + Q +RRS
Sbjct: 67 RNPQLRNLTEIAKQLQ--IRRS 86
>RGD|1549782 [details] [associations]
symbol:Pcgf1 "polycomb group ring finger 1" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=IEA;ISO;ISS] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 RGD:1549782 Prosite:PS00518
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GO:GO:0035518 GO:GO:0031519 HSSP:P25916 HOVERGEN:HBG052826
eggNOG:NOG277991 HOGENOM:HOG000231946 CTD:84759 KO:K11487
OrthoDB:EOG4894N6 EMBL:AY662670 IPI:IPI00464918
RefSeq:NP_001007001.1 UniGene:Rn.203514 ProteinModelPortal:Q6DLV9
SMR:Q6DLV9 PhosphoSite:Q6DLV9 PRIDE:Q6DLV9 GeneID:312480
KEGG:rno:312480 UCSC:RGD:1549782 InParanoid:Q6DLV9 NextBio:664916
Genevestigator:Q6DLV9 Uniprot:Q6DLV9
Length = 243
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 29/111 (26%), Positives = 48/111 (43%)
Query: 110 FKVVPVQESSNQQLEISIDIEHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEK 169
+K+ P++ +++I EH CC+C + D T+ CLH FC C ++L+ S+
Sbjct: 11 YKMDPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSK-- 68
Query: 170 RSTVLCPHCRAVVQFVGR--NHYLHNIEQSILQAHSSLRRSDEEVALLDSY 218
CP C + N L + Q I+ + EE + D Y
Sbjct: 69 ----YCPMCNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIRDFY 115
>UNIPROTKB|Q6DLV9 [details] [associations]
symbol:Pcgf1 "Polycomb group RING finger protein 1"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 RGD:1549782 Prosite:PS00518
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GO:GO:0035518 GO:GO:0031519 HSSP:P25916 HOVERGEN:HBG052826
eggNOG:NOG277991 HOGENOM:HOG000231946 CTD:84759 KO:K11487
OrthoDB:EOG4894N6 EMBL:AY662670 IPI:IPI00464918
RefSeq:NP_001007001.1 UniGene:Rn.203514 ProteinModelPortal:Q6DLV9
SMR:Q6DLV9 PhosphoSite:Q6DLV9 PRIDE:Q6DLV9 GeneID:312480
KEGG:rno:312480 UCSC:RGD:1549782 InParanoid:Q6DLV9 NextBio:664916
Genevestigator:Q6DLV9 Uniprot:Q6DLV9
Length = 243
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 29/111 (26%), Positives = 48/111 (43%)
Query: 110 FKVVPVQESSNQQLEISIDIEHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEK 169
+K+ P++ +++I EH CC+C + D T+ CLH FC C ++L+ S+
Sbjct: 11 YKMDPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSK-- 68
Query: 170 RSTVLCPHCRAVVQFVGR--NHYLHNIEQSILQAHSSLRRSDEEVALLDSY 218
CP C + N L + Q I+ + EE + D Y
Sbjct: 69 ----YCPMCNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIRDFY 115
>UNIPROTKB|C9JYD0 [details] [associations]
symbol:PCGF3 "Polycomb group RING finger protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC139887 HGNC:HGNC:10066 ChiTaRS:PCGF3
EMBL:AC107464 IPI:IPI00879042 ProteinModelPortal:C9JYD0 SMR:C9JYD0
STRING:C9JYD0 Ensembl:ENST00000427463 ArrayExpress:C9JYD0
Bgee:C9JYD0 Uniprot:C9JYD0
Length = 62
Score = 100 (40.3 bits), Expect = 0.00011, P = 0.00011
Identities = 22/56 (39%), Positives = 28/56 (50%)
Query: 128 DIE-HAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPHCRAVV 182
DI H C +C D TV CLH FC C ++L E+ +T CP CR V+
Sbjct: 10 DINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL----EENNT--CPTCRIVI 59
>UNIPROTKB|F8WD60 [details] [associations]
symbol:RNF168 "E3 ubiquitin-protein ligase RNF168"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC092933 EMBL:AC117490 HGNC:HGNC:26661 IPI:IPI00925077
ProteinModelPortal:F8WD60 SMR:F8WD60 Ensembl:ENST00000437070
ArrayExpress:F8WD60 Bgee:F8WD60 Uniprot:F8WD60
Length = 116
Score = 99 (39.9 bits), Expect = 0.00015, P = 0.00015
Identities = 29/92 (31%), Positives = 47/92 (51%)
Query: 129 IEHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPHCRAVV----QF 184
+ +C IC+ I + VT+ PC H C CF +S +++++ CP CR V ++
Sbjct: 11 LSECQCGICMEILVEPVTL-PCNHTLCKPCF-----QSTVEKASLCCPFCRRRVSSWTRY 64
Query: 185 VGRNHYLHNIEQ-SILQAH----SSLRRSDEE 211
R + L N+E +I+Q H LR S +E
Sbjct: 65 HTRRNSLVNVELWTIIQKHYPRECKLRASGQE 96
>UNIPROTKB|F1MM90 [details] [associations]
symbol:PCGF1 "Polycomb group RING finger protein 1"
species:9913 "Bos taurus" [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GO:GO:0035518 GO:GO:0031519 GeneTree:ENSGT00550000074463
IPI:IPI00687683 OMA:NEHIVCY EMBL:DAAA02030322
Ensembl:ENSBTAT00000022090 Uniprot:F1MM90
Length = 259
Score = 116 (45.9 bits), Expect = 0.00021, P = 0.00021
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 110 FKVVPVQESSNQQLEISIDIEHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEK 169
+K+ P++ +++I EH CC+C + D T+ CLH FC C ++L+ S+
Sbjct: 23 YKMDPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSK-- 80
Query: 170 RSTVLCPHC 178
CP C
Sbjct: 81 ----YCPMC 85
>UNIPROTKB|E2R984 [details] [associations]
symbol:PCGF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035518 GO:GO:0031519
GeneTree:ENSGT00550000074463 CTD:84759 KO:K11487 OMA:NEHIVCY
EMBL:AAEX03010965 RefSeq:XP_532995.2 ProteinModelPortal:E2R984
Ensembl:ENSCAFT00000013424 GeneID:475785 KEGG:cfa:475785
Uniprot:E2R984
Length = 259
Score = 116 (45.9 bits), Expect = 0.00021, P = 0.00021
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 110 FKVVPVQESSNQQLEISIDIEHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEK 169
+K+ P++ +++I EH CC+C + D T+ CLH FC C ++L+ S+
Sbjct: 23 YKMDPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSK-- 80
Query: 170 RSTVLCPHC 178
CP C
Sbjct: 81 ----YCPMC 85
>UNIPROTKB|Q9BSM1 [details] [associations]
symbol:PCGF1 "Polycomb group RING finger protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IPI] [GO:0031519 "PcG protein complex"
evidence=IDA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035518 GO:GO:0031519
HSSP:P25916 HOVERGEN:HBG052826 EMBL:AC005041 eggNOG:NOG277991
HOGENOM:HOG000231946 CTD:84759 KO:K11487 OrthoDB:EOG4894N6
EMBL:AF087884 EMBL:BC004952 IPI:IPI00902987 IPI:IPI00921560
RefSeq:NP_116062.2 UniGene:Hs.316750 ProteinModelPortal:Q9BSM1
SMR:Q9BSM1 IntAct:Q9BSM1 MINT:MINT-1460887 STRING:Q9BSM1
PhosphoSite:Q9BSM1 DMDM:223590124 PRIDE:Q9BSM1 DNASU:84759
Ensembl:ENST00000233630 GeneID:84759 KEGG:hsa:84759 UCSC:uc002sly.3
GeneCards:GC02M074732 HGNC:HGNC:17615 HPA:HPA011356 MIM:610231
neXtProt:NX_Q9BSM1 PharmGKB:PA134976631 InParanoid:Q9BSM1
OMA:NEHIVCY ChiTaRS:PCGF1 GenomeRNAi:84759 NextBio:74901
Bgee:Q9BSM1 CleanEx:HS_PCGF1 Genevestigator:Q9BSM1 Uniprot:Q9BSM1
Length = 259
Score = 116 (45.9 bits), Expect = 0.00021, P = 0.00021
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 110 FKVVPVQESSNQQLEISIDIEHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEK 169
+K+ P++ +++I EH CC+C + D T+ CLH FC C ++L+ S+
Sbjct: 23 YKMDPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSK-- 80
Query: 170 RSTVLCPHC 178
CP C
Sbjct: 81 ----YCPMC 85
>MGI|MGI:1917087 [details] [associations]
symbol:Pcgf1 "polycomb group ring finger 1" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=ISO] [GO:0035518 "histone H2A monoubiquitination"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
MGI:MGI:1917087 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035518 GO:GO:0031519
HSSP:P25916 GeneTree:ENSGT00550000074463 HOVERGEN:HBG052826
EMBL:AC104324 eggNOG:NOG277991 HOGENOM:HOG000231946 CTD:84759
KO:K11487 OrthoDB:EOG4894N6 OMA:NEHIVCY EMBL:BC028560
IPI:IPI00153112 RefSeq:NP_932109.1 UniGene:Mm.12261
ProteinModelPortal:Q8R023 SMR:Q8R023 IntAct:Q8R023 STRING:Q8R023
PhosphoSite:Q8R023 PRIDE:Q8R023 Ensembl:ENSMUST00000092614
Ensembl:ENSMUST00000165164 GeneID:69837 KEGG:mmu:69837
UCSC:uc009cmg.1 InParanoid:Q8R023 NextBio:330455 Bgee:Q8R023
CleanEx:MM_PCGF1 Genevestigator:Q8R023 Uniprot:Q8R023
Length = 259
Score = 116 (45.9 bits), Expect = 0.00021, P = 0.00021
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 110 FKVVPVQESSNQQLEISIDIEHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEK 169
+K+ P++ +++I EH CC+C + D T+ CLH FC C ++L+ S+
Sbjct: 23 YKMDPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSK-- 80
Query: 170 RSTVLCPHC 178
CP C
Sbjct: 81 ----YCPMC 85
>WB|WBGene00019828 [details] [associations]
symbol:R02E12.4 species:6239 "Caenorhabditis elegans"
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000435
Pfam:PF03148 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0000226 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0005874 InterPro:IPR017907 EMBL:FO080560
PANTHER:PTHR19960 eggNOG:NOG251508 GeneTree:ENSGT00390000016344
PIR:T16648 RefSeq:NP_508689.1 UniGene:Cel.27376
ProteinModelPortal:Q21641 SMR:Q21641 EnsemblMetazoa:R02E12.4
GeneID:187525 KEGG:cel:CELE_R02E12.4 UCSC:R02E12.4 CTD:187525
WormBase:R02E12.4 HOGENOM:HOG000199578 InParanoid:Q21641
OMA:SEWIENT NextBio:935580 Uniprot:Q21641
Length = 639
Score = 122 (48.0 bits), Expect = 0.00021, P = 0.00021
Identities = 29/88 (32%), Positives = 40/88 (45%)
Query: 115 VQESSNQQLEISIDIEHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVL 174
V+ SN E S++ E +C IC + H+ VT C H+ C GC WL S +
Sbjct: 8 VEMLSNLDFE-SLEFEDVQCHICFQVNHEPVTFLTCKHSICAGCAGRWLS------SCSV 60
Query: 175 CPHCRAVVQFVGRNHYLHNIEQSILQAH 202
CP CR V+ + N L L+ H
Sbjct: 61 CPMCRTRVREIHLNDDLKKKSLEFLKLH 88
>UNIPROTKB|F1RZM3 [details] [associations]
symbol:RFPL4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00680000099707 EMBL:CU019570
Ensembl:ENSSSCT00000004891 Uniprot:F1RZM3
Length = 286
Score = 116 (45.9 bits), Expect = 0.00026, P = 0.00026
Identities = 24/90 (26%), Positives = 48/90 (53%)
Query: 130 EHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPHCRAVVQFVG-RN 188
+ A C +CL ++ +T++ C H FC C W++ ++ + ++CP CR V++ ++
Sbjct: 7 DEAACTVCLEVFFSPITLS-CTHTFCLYCMQSWMKEQEDLK--LVCPMCRGVIENPPLKD 63
Query: 189 HYLHNIEQSILQAHSSLRRSDEEVALLDSY 218
+ + I Q HSS R ++ + + D Y
Sbjct: 64 WQIEELALLITQ-HSS--RLEQGMHMSDEY 90
>UNIPROTKB|I3LB91 [details] [associations]
symbol:RFPL4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099707
OMA:WIISMKA EMBL:CU019570 Ensembl:ENSSSCT00000027290 Uniprot:I3LB91
Length = 300
Score = 116 (45.9 bits), Expect = 0.00029, P = 0.00029
Identities = 24/90 (26%), Positives = 48/90 (53%)
Query: 130 EHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPHCRAVVQFVG-RN 188
+ A C +CL ++ +T++ C H FC C W++ ++ + ++CP CR V++ ++
Sbjct: 37 DEAACTVCLEVFFSPITLS-CTHTFCLYCMQSWMKEQEDLK--LVCPMCRGVIENPPLKD 93
Query: 189 HYLHNIEQSILQAHSSLRRSDEEVALLDSY 218
+ + I Q HSS R ++ + + D Y
Sbjct: 94 WQIEELALLITQ-HSS--RLEQGMHMSDEY 120
>UNIPROTKB|E1BAF7 [details] [associations]
symbol:E1BAF7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031519 "PcG protein complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519
GeneTree:ENSGT00550000074463 IPI:IPI00718391 OMA:THLKKFI
EMBL:DAAA02018518 EMBL:DAAA02018519 EMBL:DAAA02018520
EMBL:DAAA02018521 EMBL:DAAA02018522 Ensembl:ENSBTAT00000018621
Uniprot:E1BAF7
Length = 242
Score = 111 (44.1 bits), Expect = 0.00066, P = 0.00066
Identities = 29/97 (29%), Positives = 46/97 (47%)
Query: 128 DIE-HAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPHCRAVV---- 182
DI H C +C D TV CLH FC C ++L E+ +T CP CR V+
Sbjct: 10 DINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL----EENNT--CPTCRIVIHQSH 63
Query: 183 --QFVGRNHYLHNIEQSILQA--HSSLRRSDEEVALL 215
Q++G + + +I ++ +LRR +++ L
Sbjct: 64 PLQYIGHDRTMQDIVYKLVPGLQEGNLRRLEKKYCAL 100
>UNIPROTKB|I3LDV4 [details] [associations]
symbol:I3LDV4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035518 "histone H2A monoubiquitination" evidence=IEA]
[GO:0031519 "PcG protein complex" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074463
Ensembl:ENSSSCT00000029600 OMA:ISECSHT Uniprot:I3LDV4
Length = 269
Score = 112 (44.5 bits), Expect = 0.00066, P = 0.00066
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 118 SSNQQLEISI-DI-EHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLC 175
S +++ + I D+ EH CC+C + D T+ CLH FC C ++L+ S+ C
Sbjct: 31 SGEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSK------YC 84
Query: 176 PHC 178
P C
Sbjct: 85 PMC 87
>ZFIN|ZDB-GENE-080215-17 [details] [associations]
symbol:ftr50 "finTRIM family, member 50"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-080215-17
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 OrthoDB:EOG4R23TJ
HOGENOM:HOG000234136 HOVERGEN:HBG106862 EMBL:BC154751
IPI:IPI00859163 RefSeq:NP_001108183.1 UniGene:Dr.114073
ProteinModelPortal:A8WGK6 GeneID:100137114 KEGG:dre:100137114
CTD:100137114 eggNOG:NOG319664 NextBio:20789406 Uniprot:A8WGK6
Length = 456
Score = 115 (45.5 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 122 QLEISIDIEHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPHCR 179
+++IS+D KC +C N+ D VT+ PC H++C C ++ + ++KR CP C+
Sbjct: 3 EVDISVDQNQFKCPVCPNLLQDPVTI-PCGHSYCMSCITDCWNQEEQKR-IYSCPLCK 58
Score = 41 (19.5 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 18/74 (24%), Positives = 35/74 (47%)
Query: 193 NIEQSILQ-AHSSLRRSDEEVALLDSYAYIKSNLVIRNGKKHRRK--RAHS-PIDEESDS 248
++ +S+ Q H L+ S E++ + +K+ V + + + + HS P+ EES
Sbjct: 332 DVVKSVSQFRHRLLQFSSEQMEEISGI--VKTVQVTQTPEDQTSEEFQQHSHPVLEESSQ 389
Query: 249 IELPCPQCGTEING 262
+PC G+ G
Sbjct: 390 GSIPCFGFGSASTG 403
>UNIPROTKB|I3LUY7 [details] [associations]
symbol:I3LUY7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051301 "cell division" evidence=IEA] [GO:0016881
"acid-amino acid ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017335 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00400000022349 PANTHER:PTHR15067:SF3 EMBL:CU855572
Ensembl:ENSSSCT00000029099 OMA:VEMKEHR Uniprot:I3LUY7
Length = 135
Score = 97 (39.2 bits), Expect = 0.00073, P = 0.00073
Identities = 24/79 (30%), Positives = 38/79 (48%)
Query: 115 VQESSNQQLEISIDI--EHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRST 172
VQ + L D+ +C IC + + VT+ C H+FC+ C +EW++R E
Sbjct: 32 VQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLN-CAHSFCSYCINEWMKRKVE---- 86
Query: 173 VLCPHCRAVVQFVGRNHYL 191
CP CR ++ + H L
Sbjct: 87 --CPICRKDIK--SKTHSL 101
>UNIPROTKB|C9IZE0 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC024221 OrthoDB:EOG4K3KX1 HGNC:HGNC:30834
HOGENOM:HOG000199013 IPI:IPI00945336 ProteinModelPortal:C9IZE0
SMR:C9IZE0 STRING:C9IZE0 Ensembl:ENST00000471155
ArrayExpress:C9IZE0 Bgee:C9IZE0 Uniprot:C9IZE0
Length = 114
Score = 92 (37.4 bits), Expect = 0.00085, P = 0.00085
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 130 EHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRS------QEKRSTVLCPHCRAVVQ 183
E C IC +I+ D V PC H FC C L+ S + R + CP+CR++ +
Sbjct: 6 EELTCPICYSIFEDP-RVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCRSITE 64
>UNIPROTKB|C9J9F0 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC024221 HGNC:HGNC:30834 HOGENOM:HOG000199013 IPI:IPI00945495
ProteinModelPortal:C9J9F0 SMR:C9J9F0 STRING:C9J9F0
Ensembl:ENST00000494486 ArrayExpress:C9J9F0 Bgee:C9J9F0
Uniprot:C9J9F0
Length = 111
Score = 92 (37.4 bits), Expect = 0.00085, P = 0.00085
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 130 EHAKCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRS------QEKRSTVLCPHCRAVVQ 183
E C IC +I+ D V PC H FC C L+ S + R + CP+CR++ +
Sbjct: 6 EELTCPICYSIFEDP-RVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCRSITE 64
>UNIPROTKB|G3X8D4 [details] [associations]
symbol:RNF168 "E3 ubiquitin-protein ligase RNF168"
species:9913 "Bos taurus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00620000087973 EMBL:DAAA02001689
Ensembl:ENSBTAT00000056454 Uniprot:G3X8D4
Length = 190
Score = 107 (42.7 bits), Expect = 0.00087, P = 0.00087
Identities = 40/139 (28%), Positives = 64/139 (46%)
Query: 133 KCCICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPHCRAVV----QFVGRN 188
+C IC+ I + VT+ PC H C CF S +++++ CP CR V ++ R
Sbjct: 15 QCQICVEILFEPVTL-PCNHTLCKPCFE-----STVEKASLCCPFCRRRVSSWARYRSRT 68
Query: 189 HYLHNIEQ-SILQAH----SSLRRSDEEVA-LLDSYAYIKSNLVIRNGKKHRRKRAHSPI 242
+ L N+E I+Q H LR S +E ++D Y ++ L+ + G+ R
Sbjct: 69 NSLVNMELWEIIQKHYPKECKLRASGQESKEIVDDYQPVR--LLSKPGELRRE------Y 120
Query: 243 DEESDSIELPCPQCGTEIN 261
+EE +E C E N
Sbjct: 121 EEEISKVEAERRACEEEEN 139
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.132 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 340 340 0.00095 116 3 11 22 0.37 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 42
No. of states in DFA: 618 (66 KB)
Total size of DFA: 270 KB (2141 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.74u 0.12s 29.86t Elapsed: 00:00:02
Total cpu time: 29.75u 0.12s 29.87t Elapsed: 00:00:02
Start: Tue May 21 06:00:15 2013 End: Tue May 21 06:00:17 2013