Query 019466
Match_columns 340
No_of_seqs 127 out of 1280
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 09:41:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019466.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019466hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01559 squal_synth farnesyl 100.0 1.3E-60 2.8E-65 456.6 30.6 287 36-325 1-294 (336)
2 PLN02632 phytoene synthase 100.0 4.8E-57 1E-61 434.0 29.0 280 31-328 43-327 (334)
3 TIGR03464 HpnC squalene syntha 100.0 3.7E-56 8E-61 416.2 28.0 262 45-326 2-265 (266)
4 cd00683 Trans_IPPS_HH Trans-Is 100.0 2.2E-55 4.8E-60 410.7 26.0 261 39-318 2-265 (265)
5 TIGR03465 HpnD squalene syntha 100.0 4.3E-55 9.2E-60 409.1 27.6 261 45-326 2-264 (266)
6 COG1562 ERG9 Phytoene/squalene 100.0 2.5E-52 5.3E-57 391.8 27.7 278 32-327 5-284 (288)
7 PF00494 SQS_PSY: Squalene/phy 100.0 1.7E-51 3.7E-56 384.4 17.7 258 44-317 1-267 (267)
8 KOG1459 Squalene synthetase [L 100.0 7.2E-38 1.6E-42 291.5 14.0 316 6-325 2-320 (413)
9 KOG4411 Phytoene/squalene synt 100.0 2.8E-31 6.1E-36 234.0 22.9 268 34-327 9-289 (292)
10 cd00867 Trans_IPPS Trans-Isopr 99.8 2.4E-19 5.2E-24 164.1 13.6 169 50-233 1-197 (236)
11 cd00385 Isoprenoid_Biosyn_C1 I 99.7 5.2E-17 1.1E-21 145.7 13.9 217 50-278 1-228 (243)
12 KOG1459 Squalene synthetase [L 99.2 2.6E-10 5.7E-15 107.6 13.9 253 42-325 134-398 (413)
13 TIGR02749 prenyl_cyano solanes 95.3 1.3 2.8E-05 42.7 17.1 141 137-280 135-304 (322)
14 PLN02890 geranyl diphosphate s 95.3 0.77 1.7E-05 46.0 15.7 141 137-280 229-398 (422)
15 PRK10888 octaprenyl diphosphat 95.1 1.8 4E-05 41.7 17.4 140 137-280 132-305 (323)
16 cd00685 Trans_IPPS_HT Trans-Is 94.9 2.3 4.9E-05 39.5 17.0 126 138-280 111-243 (259)
17 TIGR02748 GerC3_HepT heptapren 94.6 2.7 5.9E-05 40.4 17.0 140 138-280 132-301 (319)
18 CHL00151 preA prenyl transfera 93.8 4.3 9.3E-05 39.1 16.5 136 142-280 141-305 (323)
19 PLN02857 octaprenyl-diphosphat 92.2 2.5 5.3E-05 42.4 12.5 142 136-280 228-398 (416)
20 PF00348 polyprenyl_synt: Poly 92.0 3.4 7.3E-05 38.4 12.6 58 159-216 132-193 (260)
21 PRK10581 geranyltranstransfera 89.5 4.3 9.4E-05 38.7 11.0 110 146-280 153-280 (299)
22 PF06330 TRI5: Trichodiene syn 88.6 10 0.00022 37.3 12.9 175 52-243 75-258 (376)
23 cd00868 Terpene_cyclase_C1 Ter 76.7 61 0.0013 29.7 16.9 182 51-242 33-238 (284)
24 cd00686 Terpene_cyclase_cis_tr 75.4 33 0.00071 33.5 10.4 169 58-243 81-258 (357)
25 COG0142 IspA Geranylgeranyl py 71.2 1E+02 0.0022 29.7 18.6 137 139-278 138-302 (322)
26 PF03936 Terpene_synth_C: Terp 65.4 1.1E+02 0.0023 27.8 15.0 181 52-242 50-253 (270)
27 cd00687 Terpene_cyclase_nonpla 54.8 1.8E+02 0.004 27.1 17.9 207 51-273 44-267 (303)
28 TIGR01439 lp_hng_hel_AbrB loop 44.4 13 0.00029 23.9 1.3 20 223-242 6-25 (43)
29 PRK02899 adaptor protein; Prov 38.5 38 0.00083 30.3 3.6 43 224-268 11-53 (197)
30 cd00684 Terpene_cyclase_plant_ 38.1 4.7E+02 0.01 27.0 19.9 197 53-270 271-491 (542)
31 PRK02315 adaptor protein; Prov 24.4 94 0.002 28.5 3.8 43 224-268 11-53 (233)
No 1
>TIGR01559 squal_synth farnesyl-diphosphate farnesyltransferase. This model describes farnesyl-diphosphate farnesyltransferase, also known as squalene synthase, as found in eukaryotes. This family is related to phytoene synthases. Tentatively identified archaeal homologs (excluded from this model) lack the C-terminal predicted transmembrane region universally conserved among members of this family.
Probab=100.00 E-value=1.3e-60 Score=456.61 Aligned_cols=287 Identities=62% Similarity=1.049 Sum_probs=262.3
Q ss_pred hHHHHHHHHhhcCCCHHHHHHhcChhhhhHHHHHHHHHhhhhhccCCCCCChhhhHHHHHHHHHHHcccccccccC-Ccc
Q 019466 36 HWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCG-TKE 114 (340)
Q Consensus 36 ~~~~c~~ilr~~s~sfyla~~lLP~~~R~av~alYAf~R~~DdI~D~~~~~~~~~~~~L~~w~~~l~~~~~~~~~g-~~~ 114 (340)
++++|.++++++|+|||+++.+||+++|++|+++|+|||.+|||+|+.+.+.+.|+..|++|.+.+....|.+..+ .+.
T Consensus 1 ~~~~C~~~l~~~SrSF~~ai~~Lp~~lR~aV~~~Yl~cR~~DdIeDd~~~~~~~kl~~l~~~~~~l~~~~~~~~~~~~~~ 80 (336)
T TIGR01559 1 SLGFCYELLNLTSRSFAAVIQELPPELRNAVCIFYLVLRALDTVEDDMTISVDKKIPLLRDFHEKIYDPDWRFTESDNEK 80 (336)
T ss_pred ChHHHHHHHhhcCccHHHHHHHcCHHHHHHHHHHHHHHHhccccccCCCCCHHHHHHHHHHHHHHHhccCcccCCCCChh
Confidence 3679999999999999999999999999999999999999999999988877788999999999998766655422 445
Q ss_pred hhHHHhhHHHHHHHHHhcChhHHHHHHHHHHhhhhHHHhhhh-hhc--CCHHHHHHHHHhhhhHHHHHHHHHhcccCCCC
Q 019466 115 YKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC-KEV--ESIDDYDEYCYYVAGLVGLGLSKLFYASGTED 191 (340)
Q Consensus 115 ~~~l~~~l~~v~~~~~~~~~~~~~li~~~~~~~~~g~~~Dl~-~~~--~t~~eL~~Yc~~vAg~VG~l~~~il~~~~~~~ 191 (340)
+..+...++.+...|..++++++++|.+++.+|++||++|+. ..| +|++||+.|||+|||+||+|+++|++.+|..+
T Consensus 81 ~~~L~~~~~~v~~~~~~l~~~~~~~I~~~~~~M~~GMa~dl~~~~~~~~T~~dL~~YCy~VAG~VG~mlt~l~~~~~~~~ 160 (336)
T TIGR01559 81 DRQVLDDFPVVSLEFLKLKPKYQEVIADITRRMGNGMADFIDKEVTNEQTVGDYDKYCHYVAGLVGIGLSRLFVASGFED 160 (336)
T ss_pred hHHHHHhchHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCcCCCCCHHHHHHHHhccccHHHHHHHHHHhhcCCCC
Confidence 567888999999999999999999999999999999999997 567 99999999999999999999999997643322
Q ss_pred C---ChhHHHHHHHHHHHHHHHHhchhhhhccCCCCcccccHHHHHhcCCChhhhhcccCCHHHHHHHHHHHHHHHHHHH
Q 019466 192 L---APDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVE 268 (340)
Q Consensus 192 ~---~~~~~A~~lG~AlQltNiLRDi~eD~~~~~~GR~YLP~d~L~~~gv~~edl~~~~~~~~~~~~i~~~~~~a~~~l~ 268 (340)
+ ...+.|.++|.|||+||||||++||++ +||||||.|+|.+||++.+++..+.+++++..++.+++.+|+.||.
T Consensus 161 ~~~~~~~~~A~~lG~aLQlTNIlRDv~ED~~---~GR~YlP~e~l~~~g~~~~dl~~~~~~~~~~~~l~~lv~~A~~~~~ 237 (336)
T TIGR01559 161 PSLGESEALSNSMGLFLQKTNIIRDYLEDIN---EGRMFWPREIWSKYAKKLGDFKKPENSDKALQCLNELVTNALHHAT 237 (336)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHhHHh---CCCCCCCHHHHHHcCCCHHHhcCccccHHHHHHHHHHHHHHHHHHH
Confidence 2 235789999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccccchhhhhhHHHHHHHHHHHhcCCCccccccccCHHHHHHHHHHH
Q 019466 269 DCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGMILILNMYF 325 (340)
Q Consensus 269 ~a~~~~~~lp~~~~~~~~~~p~~~a~~~l~~~~~~~dv~~~~v~~~r~~~~~~l~~~ 325 (340)
.|..|+..++..+++.||+||..||++||+.+++|.++|++.||++|+....+.+++
T Consensus 238 ~al~yl~~l~~~~~~~fcaip~~mAi~TL~~~~~n~~~~~~~VKi~r~~~~~~~~~~ 294 (336)
T TIGR01559 238 DCLTYLSRLRDQSIFNFCAIPQVMAIATLALCYNNPQVFQGNVKIRKGTTVKLILDS 294 (336)
T ss_pred HHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHhcChhhcCCCceecHHHHHHHHHHc
Confidence 999999999888888899999999999999999999999999999999988887655
No 2
>PLN02632 phytoene synthase
Probab=100.00 E-value=4.8e-57 Score=434.00 Aligned_cols=280 Identities=20% Similarity=0.239 Sum_probs=244.6
Q ss_pred CCCchhHHHHHHHHhhcCCCHHHHHHhcChhhhhHHHHHHHHHhhhhhccCCCCCChhhhHHHHHHHHHHHccccccccc
Q 019466 31 IPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSC 110 (340)
Q Consensus 31 ~~l~~~~~~c~~ilr~~s~sfyla~~lLP~~~R~av~alYAf~R~~DdI~D~~~~~~~~~~~~L~~w~~~l~~~~~~~~~ 110 (340)
-++.+++.+|.++++++|+|||+++++||+++|++++++|+|||++|||+|+++.+. .+..+|+||++.+.. ++.
T Consensus 43 ~~l~~a~~~c~~i~r~~s~sFyla~~lLP~~~R~ai~alYAf~R~~DdI~D~~~~~~-~~~~~L~~w~~~l~~---~~~- 117 (334)
T PLN02632 43 ALLEEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASH-ITPAALDRWEARLED---LFD- 117 (334)
T ss_pred ccchHHHHHHHHHHhhcCchHHHHHHhCCHHHHHHHHHHHHHHHHHhHHhcCCCCCh-hhHHHHHHHHHHHHH---HhC-
Confidence 357899999999999999999999999999999999999999999999999877643 456789999999987 465
Q ss_pred CCcchhHHHhhHHHHHHHHHhcChhHHHHHHHHHHhhhhHHHhhhh-hhcCCHHHHHHHHHhhhhHHHHHHHHHhcccCC
Q 019466 111 GTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC-KEVESIDDYDEYCYYVAGLVGLGLSKLFYASGT 189 (340)
Q Consensus 111 g~~~~~~l~~~l~~v~~~~~~~~~~~~~li~~~~~~~~~g~~~Dl~-~~~~t~~eL~~Yc~~vAg~VG~l~~~il~~~~~ 189 (340)
|.+ .+|+..++.+++..|..+..++.++|+ ||++|+. .+|+|++||+.|||+|||+||+|+++|+|..+.
T Consensus 118 g~~-~~pv~~aL~~~~~~~~L~~~~~~~li~--------g~~~Dl~~~~~~t~~eL~~Ycy~vAgtVG~l~l~vlg~~~~ 188 (334)
T PLN02632 118 GRP-YDMLDAALADTVSKFPLDIQPFRDMIE--------GMRMDLVKSRYENFDELYLYCYYVAGTVGLMSVPVMGIAPE 188 (334)
T ss_pred CCC-CChHHHHHHHHHHHCCCChHHHHHHHH--------HHHHHhccCCCCCHHHHHHHHHHhhHHHHHHHHHHhCCCCc
Confidence 655 567889999999998766677888887 9999997 789999999999999999999999999986321
Q ss_pred CC---CChhHHHHHHHHHHHHHHHHhchhhhhccCCCCcccccHHHHHhcCCChhhhhcccCCHHHHHHHHHHHHHHHHH
Q 019466 190 ED---LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMH 266 (340)
Q Consensus 190 ~~---~~~~~~A~~lG~AlQltNiLRDi~eD~~~~~~GR~YLP~d~L~~~gv~~edl~~~~~~~~~~~~i~~~~~~a~~~ 266 (340)
.. ....+.|.++|+|+|+|||||||+||++ +||||||.|+|.+||+++++++++..+++++.++.+++++|+.+
T Consensus 189 ~~~~~~~~~~~A~~lG~AlQltNILRDv~eD~~---~GRvYLP~e~L~~~Gv~~edl~~~~~~~~~~~l~~~~~~~Ar~~ 265 (334)
T PLN02632 189 SKASTESVYNAALALGIANQLTNILRDVGEDAR---RGRVYLPQDELAQFGLTDEDIFAGKVTDKWRAFMKFQIKRARMY 265 (334)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CCceeCCHHHHHHcCCCHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 01 2246789999999999999999999998 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccccccchhhhhhHHHHHHHHH-HHhcCCCccccccccCHHHHHHHHHHHhcc
Q 019466 267 VEDCLKYMSALRDHAIFRFCAIPQIMAIGTLA-LCYNNIEVFRGVVKMRRGMILILNMYFFKG 328 (340)
Q Consensus 267 l~~a~~~~~~lp~~~~~~~~~~p~~~a~~~l~-~~~~~~dv~~~~v~~~r~~~~~~l~~~~~~ 328 (340)
|++|+.++..+|+.+ ..+...+..+....+. +..+||++|++++.+++++|+|++.++|.+
T Consensus 266 ~~~a~~~l~~lp~~~-r~~v~~a~~~y~~iL~~i~~~~~~v~~~R~~l~~~~Kl~~~~~~~~~ 327 (334)
T PLN02632 266 FAEAEEGVSELDPAS-RWPVWASLLLYRQILDAIEANDYDNFTKRAYVGKWKKLLALPLAYAR 327 (334)
T ss_pred HHHHHHhHhhCCHHh-HHHHHHHHHHHHHHHHHHHHcCCCcCCCCCccCHHHHHHHHHHHHHh
Confidence 999999999999885 2233445555555564 456899999999999999999999988754
No 3
>TIGR03464 HpnC squalene synthase HpnC. This family of genes are members of a superfamily (pfam00494) of phytoene and squalene synthases which catalyze the head-t0-head condensation of polyisoprene pyrophosphates. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. In the organisms Zymomonas mobilis and Bradyrhizobium japonicum these genes have been characterized as squalene synthases (farnesyl-pyrophosphate ligases). Often, these genes appear in tandem with the HpnD gene which appears to have resulted from an ancient gene duplication event. Presumably these proteins form a heteromeric complex, but this has not yet been experimentally demonstrated.
Probab=100.00 E-value=3.7e-56 Score=416.20 Aligned_cols=262 Identities=17% Similarity=0.154 Sum_probs=232.6
Q ss_pred hhcCCCHHHHHHhcChhhhhHHHHHHHHHhhhhhccCCCCCChhhhHHHHHHHHHHHcccccccccCCcchhHHHhhHHH
Q 019466 45 HKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHH 124 (340)
Q Consensus 45 r~~s~sfyla~~lLP~~~R~av~alYAf~R~~DdI~D~~~~~~~~~~~~L~~w~~~l~~~~~~~~~g~~~~~~l~~~l~~ 124 (340)
+++++|||+|+++||+++|++++++|||||++|||+|+++.+++++..+|+||++.+++ .+. |.+ .+|+..++.+
T Consensus 2 ~~~~~sf~~a~~~lp~~~R~~~~alYAf~R~~Ddi~D~~~~~~~~~~~~L~~wr~~l~~---~~~-g~~-~~pv~~aL~~ 76 (266)
T TIGR03464 2 VAHYENFPVASLLLPARLRAPIHAVYAFARTADDIADEGDGSAEERLALLDDFRAELDA---IYS-GEP-AAPVFVALAR 76 (266)
T ss_pred CCccCcHHHHHHhCCHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHHH---HhC-CCC-CChHHHHHHH
Confidence 57899999999999999999999999999999999999765667788999999999987 355 655 6689999999
Q ss_pred HHHHHHhcChhHHHHHHHHHHhhhhHHHhhhh-hhcCCHHHHHHHHHhhhhHHHHHHHHHhcccCCCCCChhHHHHHHHH
Q 019466 125 VSTAFLELGKGYQDAIEDITKRMGAGMAKFIC-KEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGL 203 (340)
Q Consensus 125 v~~~~~~~~~~~~~li~~~~~~~~~g~~~Dl~-~~~~t~~eL~~Yc~~vAg~VG~l~~~il~~~~~~~~~~~~~A~~lG~ 203 (340)
+++.+....+++.++|+ ||++|+. .+|.|++||+.|||+|||+||+|+++|+|.. +....+.|.++|+
T Consensus 77 ~~~~~~l~~~~~~~li~--------~~~~Dl~~~~~~t~~eL~~Y~~~vAg~vg~l~~~i~g~~---~~~~~~~A~~lG~ 145 (266)
T TIGR03464 77 TVQRHGLPIEPFLDLLD--------AFRQDVVVTRYATWAELLDYCRYSANPVGRLVLDLYGAS---DPENVALSDAICT 145 (266)
T ss_pred HHHHcCCChHHHHHHHH--------HHHHhccCCCCCCHHHHHHHHHHhHHHHHHHHHHHcCCC---ChhHHHHHHHHHH
Confidence 99998766667788876 9999997 7899999999999999999999999999852 2335678999999
Q ss_pred HHHHHHHHhchhhhhccCCCCcccccHHHHHhcCCChhhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Q 019466 204 FLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIF 283 (340)
Q Consensus 204 AlQltNiLRDi~eD~~~~~~GR~YLP~d~L~~~gv~~edl~~~~~~~~~~~~i~~~~~~a~~~l~~a~~~~~~lp~~~~~ 283 (340)
|+|+|||||||+||++ +||||||.|+|++||++++++.++..+++++.++++++++|+.+|.+|+.++..+|.+. .
T Consensus 146 AlQltniLRDl~eD~~---~gR~YLP~~~l~~~Gv~~edl~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~lp~~~-~ 221 (266)
T TIGR03464 146 ALQLINFWQDVGVDYR---KGRVYLPRDDLARFGVSEEDLAAGRATPALRELMAFEVSRTRALLDRGAPLAARVDGRL-G 221 (266)
T ss_pred HHHHHHHHHhhHHHHh---cCCccCCHHHHHHcCCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHhHHhCCHhh-h
Confidence 9999999999999999 99999999999999999999999999999999999999999999999999999999774 3
Q ss_pred hhhhhhHHHHHHHHHH-HhcCCCccccccccCHHHHHHHHHHHh
Q 019466 284 RFCAIPQIMAIGTLAL-CYNNIEVFRGVVKMRRGMILILNMYFF 326 (340)
Q Consensus 284 ~~~~~p~~~a~~~l~~-~~~~~dv~~~~v~~~r~~~~~~l~~~~ 326 (340)
.++..+..+...++.. .++++++|++++++++.+|+|++++++
T Consensus 222 ~~~~~~~~~y~~iL~~l~~~~~~~~~~r~~~~~~~kl~~~~~a~ 265 (266)
T TIGR03464 222 LELALIVRGGLRILEKIERQGYDVLRERPKLGKFDWAGLLLRAL 265 (266)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCCcCCHHHHHHHHHHHh
Confidence 3345555566666754 457999999999999999999999885
No 4
>cd00683 Trans_IPPS_HH Trans-Isoprenyl Diphosphate Synthases, head-to-head. These trans-Isoprenyl Diphosphate Synthases (Trans_IPPS) catalyze a head-to-head (HH) (1'-1) condensation reaction. This CD includes squalene and phytoene synthases which catalyze the 1'-1 condensation of two 15-carbon (farnesyl) and 20-carbon (geranylgeranyl) isoprenyl diphosphates, respectively. The catalytic site consists of a large central cavity formed by mostly antiparallel alpha helices with two aspartate-rich regions (DXXXD) located on opposite walls. These residues mediate binding of prenyl phosphates. A two-step reaction has been proposed for squalene synthase (farnesyl-diphosphate farnesyltransferase) in which, two molecules of FPP react to form a stable cyclopropylcarbinyl diphosphate intermediate, and then the intermediate undergoes heterolysis, isomerization, and reduction with NADPH to form squalene, a precursor of cholestrol. The carotenoid biosynthesis enzyme, phytoene synthase (CrtB), catalyzes
Probab=100.00 E-value=2.2e-55 Score=410.69 Aligned_cols=261 Identities=33% Similarity=0.502 Sum_probs=231.0
Q ss_pred HHHHHHhhcCCCHHHHHHhcChhhhhHHHHHHHHHhhhhhccCCCCCChhhhHHHHHHHHHHHcccccccccCCcchhHH
Q 019466 39 FCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVL 118 (340)
Q Consensus 39 ~c~~ilr~~s~sfyla~~lLP~~~R~av~alYAf~R~~DdI~D~~~~~~~~~~~~L~~w~~~l~~~~~~~~~g~~~~~~l 118 (340)
+|.++++++|+|||+++++||++.|+++++||||||++|||+|+++.+...+..+|+||++.+.. .+. |.++.+|+
T Consensus 2 ~c~~~~~~~~~sf~~a~~~lp~~~R~~~~alYaf~r~~Ddi~D~~~~~~~~~~~~L~~w~~~l~~---~~~-~~~~~~pv 77 (265)
T cd00683 2 YCRAILRKGSRSFYLASRLLPPELRRAVCALYAFCRAADDIVDDPAAPPDEKLALLDAFRAELDA---AYW-GGAPTHPV 77 (265)
T ss_pred HHHHHHHHhCCcHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhCCCCCchhHHHHHHHHHHHHHH---HHc-CCCCCChH
Confidence 79999999999999999999999999999999999999999999887656888999999999987 355 55566789
Q ss_pred HhhHHHHHHHHHhcChhHHHHHHHHHHhhhhHHHhhhh-hhcCCHHHHHHHHHhhhhHHHHHHHHHhcccCCCCCChhHH
Q 019466 119 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC-KEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSL 197 (340)
Q Consensus 119 ~~~l~~v~~~~~~~~~~~~~li~~~~~~~~~g~~~Dl~-~~~~t~~eL~~Yc~~vAg~VG~l~~~il~~~~~~~~~~~~~ 197 (340)
+.+|..+++.+.....++.++|+ ||++|+. .+|+|++||+.|||+|||+||+|+++|+|.+ ......+.
T Consensus 78 ~~al~~~~~~~~l~~~~~~~li~--------g~~~Dl~~~~~~t~~eL~~Y~~~vAg~vg~l~~~i~~~~--~~~~~~~~ 147 (265)
T cd00683 78 LRALADLARRYGIPREPFRDLLA--------GMAMDLDKRRYETLDELDEYCYYVAGVVGLMLLRVFGAS--SDEAALER 147 (265)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHH--------HHHHhCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHhCCC--CChHHHHH
Confidence 99999999987666667788886 9999997 7999999999999999999999999999852 23345689
Q ss_pred HHHHHHHHHHHHHHhchhhhhccCCCCcccccHHHHHhcCCChhhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 019466 198 SNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSAL 277 (340)
Q Consensus 198 A~~lG~AlQltNiLRDi~eD~~~~~~GR~YLP~d~L~~~gv~~edl~~~~~~~~~~~~i~~~~~~a~~~l~~a~~~~~~l 277 (340)
|.++|+|+|+||||||+++|++ +||||||.|+|.+||++++++.++..+++++.++.+++++|+.+|..|+.++..+
T Consensus 148 A~~lG~AlqltnilRdv~eD~~---~gR~YlP~d~l~~~gv~~~~l~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~l 224 (265)
T cd00683 148 ARALGLALQLTNILRDVGEDAR---RGRIYLPREELARFGVTLEDLLAPENSPAFRALLRRLIARARAHYREALAGLAAL 224 (265)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc---cCCCcCCHHHHHHcCCCHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhHHhC
Confidence 9999999999999999999998 9999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhhhHHHH-HHHH-HHHhcCCCccccccccCHHHH
Q 019466 278 RDHAIFRFCAIPQIMA-IGTL-ALCYNNIEVFRGVVKMRRGMI 318 (340)
Q Consensus 278 p~~~~~~~~~~p~~~a-~~~l-~~~~~~~dv~~~~v~~~r~~~ 318 (340)
|+.. +++.+++... ...+ .+..+++++|+.++++++.+|
T Consensus 225 p~~~--~~~~~~~~~~y~~il~~i~~~~~~~~~~r~~~~~~~k 265 (265)
T cd00683 225 PRRS--RFCVRAAAMLYRTILDEIEARGYDVLSVRVRVPKARK 265 (265)
T ss_pred CHhh--HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Confidence 9773 4566666555 3333 345679999999999887653
No 5
>TIGR03465 HpnD squalene synthase HpnD. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. In the organisms Zymomonas mobilis and Bradyrhizobium japonicum these genes have been characterized as squalene synthases (farnesyl-pyrophosphate ligases). Often, these genes appear in tandem with the HpnC gene which appears to have resulted from an ancient gene duplication event. Presumably these proteins form a heteromeric complex, but this has not yet been experimentally demonstrated.
Probab=100.00 E-value=4.3e-55 Score=409.06 Aligned_cols=261 Identities=20% Similarity=0.229 Sum_probs=233.9
Q ss_pred hhcCCCHHHHHHhcChhhhhHHHHHHHHHhhhhhccCCCCCChhhhHHHHHHHHHHHcccccccccCCcchhHHHhhHHH
Q 019466 45 HKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHH 124 (340)
Q Consensus 45 r~~s~sfyla~~lLP~~~R~av~alYAf~R~~DdI~D~~~~~~~~~~~~L~~w~~~l~~~~~~~~~g~~~~~~l~~~l~~ 124 (340)
+++|+|||+|+.+||++.|+++++||||||++|||+|+.+. +..+..+|+||++.+.. ++. |.+ .+|+..++..
T Consensus 2 ~~~s~sF~~a~~~lp~~~R~~~~alYaf~r~~d~i~D~~~~-~~~~~~~L~~w~~~l~~---~~~-g~~-~~pv~~al~~ 75 (266)
T TIGR03465 2 AASGSSFYYGMRLLPPERRRAMTALYAFCREVDDIVDEDSD-PEVAQAKLAWWRAEIDR---LYA-GAP-SHPVARALAD 75 (266)
T ss_pred CCCcCcHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhcCCCC-chHHHHHHHHHHHHHHH---HhC-CCC-CChHHHHHHH
Confidence 67999999999999999999999999999999999999654 55788999999999987 354 554 5689999999
Q ss_pred HHHHHHhcChhHHHHHHHHHHhhhhHHHhhhh-hhcCCHHHHHHHHHhhhhHHHHHHHHHhcccCCCCCChhHHHHHHHH
Q 019466 125 VSTAFLELGKGYQDAIEDITKRMGAGMAKFIC-KEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGL 203 (340)
Q Consensus 125 v~~~~~~~~~~~~~li~~~~~~~~~g~~~Dl~-~~~~t~~eL~~Yc~~vAg~VG~l~~~il~~~~~~~~~~~~~A~~lG~ 203 (340)
+++.+.....++.++|+ ||++|+. ++|+|++||+.|||+|||+||+|+++++|. .+....+.|+++|+
T Consensus 76 ~~~~~~l~~~~~~~li~--------g~~~Dl~~~~~~t~~dL~~Y~~~vAg~vg~l~~~llg~---~~~~~~~~a~~lG~ 144 (266)
T TIGR03465 76 PARRFDLPQEDFLEVID--------GMEMDLEQTRYPDFAELDLYCDRVAGAVGRLSARIFGA---TDARTLEYAHHLGR 144 (266)
T ss_pred HHHHcCCCHHHHHHHHH--------HHHHHcCCCCCCCHHHHHHHHHHhHHHHHHHHHHHhCC---CChhHHHHHHHHHH
Confidence 99998766667777776 9999997 799999999999999999999999999984 23345789999999
Q ss_pred HHHHHHHHhchhhhhccCCCCcccccHHHHHhcCCChhhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Q 019466 204 FLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIF 283 (340)
Q Consensus 204 AlQltNiLRDi~eD~~~~~~GR~YLP~d~L~~~gv~~edl~~~~~~~~~~~~i~~~~~~a~~~l~~a~~~~~~lp~~~~~ 283 (340)
|+|+||||||+++|++ +||||||.|+|.+||+++++|.++..++++++++.+++++|+.+|.+|+.++..+|++. .
T Consensus 145 AlqltnilRdv~eD~~---~gR~ylP~~~l~~~gv~~~~l~~~~~~~~~~~~~~~l~~~A~~~l~~a~~~~~~~p~~~-~ 220 (266)
T TIGR03465 145 ALQLTNILRDVGEDAR---RGRIYLPAEELQRFGVPAADILEGRYSPALAALCRFQAERARAHYAEADALLPACDRRA-Q 220 (266)
T ss_pred HHHHHHHHHHhHHHHh---CCCeecCHHHHHHcCCCHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhCCHhh-h
Confidence 9999999999999999 99999999999999999999999999999999999999999999999999999999865 3
Q ss_pred hhhhhhHHHHHHHHHH-HhcCCCccccccccCHHHHHHHHHHHh
Q 019466 284 RFCAIPQIMAIGTLAL-CYNNIEVFRGVVKMRRGMILILNMYFF 326 (340)
Q Consensus 284 ~~~~~p~~~a~~~l~~-~~~~~dv~~~~v~~~r~~~~~~l~~~~ 326 (340)
.++.++..++..++.. .+++|++|++++++++.+|+|++++++
T Consensus 221 ~~~~~~~~~~~~iL~~i~~~~~~~~~~r~~~~~~~k~~~~~~~~ 264 (266)
T TIGR03465 221 RAARAMAAIYRALLDEIEADGFQVLRQRVSLTPLRKLWIALRTW 264 (266)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCcCCHHHHHHHHHHHH
Confidence 4566677777777764 467999999999999999999999985
No 6
>COG1562 ERG9 Phytoene/squalene synthetase [Lipid metabolism]
Probab=100.00 E-value=2.5e-52 Score=391.85 Aligned_cols=278 Identities=25% Similarity=0.308 Sum_probs=242.8
Q ss_pred CCchhHHHHHHHHhhcCCCHHHHHHhcChhhhhHHHHHHHHHhhhhhccCCCCCChhhhHHHHHHHHHHHcccccccccC
Q 019466 32 PPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCG 111 (340)
Q Consensus 32 ~l~~~~~~c~~ilr~~s~sfyla~~lLP~~~R~av~alYAf~R~~DdI~D~~~~~~~~~~~~L~~w~~~l~~~~~~~~~g 111 (340)
....++.+|.++++.+|+|||+++++||+++|++++++|+|||++|||+|+++.+.... ..+.+|+..+... +. +
T Consensus 5 ~~~~~~~~c~~i~~~~srtf~la~~~lp~~~R~av~alYa~~R~~Ddv~D~~~~~~~~~-e~~~~~~~~~~~~---~~-~ 79 (288)
T COG1562 5 EIMEALDYCLDILRETSRTFYLAILLLPPEKREAVWALYAFCREADDVVDGVSDPDLPA-EILLAWRRELDGD---FS-G 79 (288)
T ss_pred chhHHHHHHHHHHHHhCcchHHHHHhCCHHHHHHHHHHHHHHHHHHHHhhcccchhhHH-HHHHHHHHHHhcc---cc-C
Confidence 34567899999999999999999999999999999999999999999999998763333 3444454445441 33 4
Q ss_pred Cc-chhHHHhhHHHHHHHHHhcChhHHHHHHHHHHhhhhHHHhhhh-hhcCCHHHHHHHHHhhhhHHHHHHHHHhcccCC
Q 019466 112 TK-EYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC-KEVESIDDYDEYCYYVAGLVGLGLSKLFYASGT 189 (340)
Q Consensus 112 ~~-~~~~l~~~l~~v~~~~~~~~~~~~~li~~~~~~~~~g~~~Dl~-~~~~t~~eL~~Yc~~vAg~VG~l~~~il~~~~~ 189 (340)
.+ .++|+..+|.+++++|..+..++.++++ ||++|+. .+|.+++||+.|||+|||+||.|++.|++.+.
T Consensus 80 ~~~~~~pv~~al~~~~~~~~~~~~~~~~~~d--------a~~~Dl~~~~y~~~~eL~~Yc~~vAg~vG~l~~~Il~~~~- 150 (288)
T COG1562 80 QPASDHPVLAALVEVARRFGLPREAFPALID--------AMRMDLDRTRYLDFEELEEYCYGVAGAVGLLLARILGPDK- 150 (288)
T ss_pred CCcccCHHHHHHHHHHHHcCCCHHHHHHHHH--------HHHHHhhhccccCHHHHHHHHHHhHHHHHHHHHHHhCccc-
Confidence 32 5678999999999998777777888887 9999997 79999999999999999999999999998632
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhchhhhhccCCCCcccccHHHHHhcCCChhhhhcccCCHHHHHHHHHHHHHHHHHHHH
Q 019466 190 EDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVED 269 (340)
Q Consensus 190 ~~~~~~~~A~~lG~AlQltNiLRDi~eD~~~~~~GR~YLP~d~L~~~gv~~edl~~~~~~~~~~~~i~~~~~~a~~~l~~ 269 (340)
.....+.|..+|.|+|+||||||++||.. +||+|||.|+|.+||++.+++..+.+++++++++++++.+|+.++..
T Consensus 151 -~~~~~~~a~~lG~A~QlvNilRdv~eD~~---~GrvylP~e~l~~~g~~~~d~~~~~~~~~~~~~~~~~~~~ar~~~~~ 226 (288)
T COG1562 151 -DAATRAYARGLGLALQLVNILRDVGEDRR---RGRVYLPAEELARFGVSEADLLAGRVDDAFRELMRFEADRARDHLAE 226 (288)
T ss_pred -chhhHHHHHHHHHHHHHHHHHHHhHHHHh---CCcccCCHHHHHHhCCCHHHHHcccchhHHHHHHHHHHHHHHHHHHH
Confidence 22234567779999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccccccchhhhhhHHHHHHHHHHHhcCCCccccccccCHHHHHHHHHHHhc
Q 019466 270 CLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGMILILNMYFFK 327 (340)
Q Consensus 270 a~~~~~~lp~~~~~~~~~~p~~~a~~~l~~~~~~~dv~~~~v~~~r~~~~~~l~~~~~ 327 (340)
|+.+++.+|......+|..+.+.+..+..+..++.+||++++.++++++.|++++++.
T Consensus 227 a~~~~~~lp~~~~~~~~~~~~~~~~~~~~i~a~~~~vl~~~~~l~~~~~~~~~~~~~~ 284 (288)
T COG1562 227 ARRGLPALPGRAQLAVLAAALLYAYLLDAIEADPADVLSQRAVLPKLRKLWLLLKAWL 284 (288)
T ss_pred HHHhhhhCCccccchhhHHHHHHHHHHHHHHccchhhhccCcccCcchHHHHHHHHHH
Confidence 9999999999986667777777888787888889999999999999999999998853
No 7
>PF00494 SQS_PSY: Squalene/phytoene synthase; InterPro: IPR002060 Squalene synthase 2.5.1.21 from EC (farnesyl-diphosphate farnesyltransferase) (SQS) and Phytoene synthase 2.5.1.32 from EC (PSY) share a number of functional similarities. These similarities are also reflected at the level of their primary structure [, , ]. In particular three well conserved regions are shared by SQS and PSY; they could be involved in substrate binding and/or the catalytic mechanism. SQS catalyzes the conversion of two molecules of farnesyl diphosphate (FPP) into squalene. It is the first committed step in the cholesterol biosynthetic pathway. The reaction carried out by SQS is catalyzed in two separate steps: the first is a head-to-head condensation of the two molecules of FPP to form presqualene diphosphate; this intermediate is then rearranged in a NADP-dependent reduction, to form squalene: 2 FPP -> presqualene diphosphate + NADP -> squalene SQS is found in eukaryotes. In yeast it is encoded by the ERG9 gene, in mammals by the FDFT1 gene. SQS seems to be membrane-bound. PSY catalyzes the conversion of two molecules of geranylgeranyl diphosphate (GGPP) into phytoene. It is the second step in the biosynthesis of carotenoids from isopentenyl diphosphate. The reaction carried out by PSY is catalyzed in two separate steps: the first is a head-to-head condensation of the two molecules of GGPP to form prephytoene diphosphate; this intermediate is then rearranged to form phytoene. 2 GGPP -> prephytoene diphosphate -> phytoene PSY is found in all organisms that synthesize carotenoids: plants and photosynthetic bacteria as well as some non- photosynthetic bacteria and fungi. In bacteria PSY is encoded by the gene crtB. In plants PSY is localized in the chloroplast.; GO: 0016740 transferase activity, 0009058 biosynthetic process; PDB: 3NRI_A 3NPR_A 2ZCR_A 2ZCP_B 4F6V_A 4EA0_A 3ACW_A 4F6X_A 3VJE_B 3ACX_A ....
Probab=100.00 E-value=1.7e-51 Score=384.36 Aligned_cols=258 Identities=26% Similarity=0.316 Sum_probs=210.0
Q ss_pred HhhcCCCHHHHHHhcChhhhhHHHHHHHHHhhhhhccCCCCCChhhhHHHHHHHHHHHccccccccc----CCcchhHHH
Q 019466 44 LHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSC----GTKEYKVLM 119 (340)
Q Consensus 44 lr~~s~sfyla~~lLP~~~R~av~alYAf~R~~DdI~D~~~~~~~~~~~~L~~w~~~l~~~~~~~~~----g~~~~~~l~ 119 (340)
+|++|+|||+|+++||++.|++++++|||||++|||+|+++. +..+.++|+||++.+.. .+.. +.++.+|++
T Consensus 1 lr~~~~sf~~a~~~lP~~~R~~~~alyaf~r~~d~i~D~~~~-~~~~~~~L~~w~~~l~~---~~~~~~~~~~~~~~pv~ 76 (267)
T PF00494_consen 1 LRKHSRSFYLASLLLPKEKRPAVFALYAFCRELDDIVDEPSD-PEEARARLQWWRDALNS---IFASYEDSLPEPSHPVA 76 (267)
T ss_dssp -HHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHHHHHHCTSS--HSCHHHHHHHHHHHHH---HHH-TSTHHHSSHHHHH
T ss_pred CCCCCccHHHHHHHCCHHHHHHHHHHHHHHHHHhhccccchh-hHHHHHHHHHHHHHHHH---HhhhhhhccCCCcCHHH
Confidence 588999999999999999999999999999999999999985 45677899999999997 3421 234667899
Q ss_pred hhHHHHHHHHHhcChhHHHHHHHHHHhhhhHHHhhhh-hhcCCHHHHHHHHHhhhhHHHHHHHHHhcccCCCCCChhHHH
Q 019466 120 DQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC-KEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLS 198 (340)
Q Consensus 120 ~~l~~v~~~~~~~~~~~~~li~~~~~~~~~g~~~Dl~-~~~~t~~eL~~Yc~~vAg~VG~l~~~il~~~~~~~~~~~~~A 198 (340)
.+|..+++.+.....++.++|+ ||++|+. ++|+|++||+.|||+|||+||+|++++++... ++....++|
T Consensus 77 ~~l~~~~~~~~l~~~~l~~li~--------~~~~dl~~~~~~t~~~L~~Y~~~vag~vg~l~~~~~~~~~-~~~~~~~~a 147 (267)
T PF00494_consen 77 RALADLVRRYGLPREPLLELID--------GMEMDLEFTPYETFADLERYCYYVAGSVGLLLLQLLGAHD-PDEAARDAA 147 (267)
T ss_dssp HHHHHHHCCSHHHHHHHHHHHH--------HHHHCTT-S--SSHHHHHHHHHHHTHHHHHHHHHHHHSST-SHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHH--------HhcccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhcccc-chhhHHHHH
Confidence 9999999887766666777776 9999997 89999999999999999999999999998621 112467899
Q ss_pred HHHHHHHHHHHHHhchhhh-hccCCCCcccccHHHHHhcCCChhhhhccc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 019466 199 NSMGLFLQKTNIIRDYLED-INEIPKCRMFWPREIWSKYVNKLEDLKYEE-NSDKAVQCLNDMVTNALMHVEDCLKYMSA 276 (340)
Q Consensus 199 ~~lG~AlQltNiLRDi~eD-~~~~~~GR~YLP~d~L~~~gv~~edl~~~~-~~~~~~~~i~~~~~~a~~~l~~a~~~~~~ 276 (340)
.++|.|+|+||||||+++| +. +||||||.|+|.+||++++++..+. .+++++.++.+++.+|+.+|.+|+.++..
T Consensus 148 ~~lG~alql~nilRd~~~D~~~---~gR~ylP~d~l~~~gv~~~dl~~~~~~~~~~~~~~~~~~~~A~~~l~~a~~~~~~ 224 (267)
T PF00494_consen 148 RALGRALQLTNILRDIPEDALR---RGRIYLPLDDLRRFGVTPEDLLAGRPRSERLRALIRELAARARAHLDEARAGLSA 224 (267)
T ss_dssp HHHHHHHHHHHHHHTHHHH-HH---TT---S-HHHHHHTTSSHHHHHHHG-GGHHHHHHHHHHHHHHHHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHHHHhHHHHHh---cccccCCchhHHHcCCCHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999 78 9999999999999999999998876 78889999999999999999999999999
Q ss_pred ccccccchhhhhhHHHHHHHHHH-HhcCCC-ccccccccCHHH
Q 019466 277 LRDHAIFRFCAIPQIMAIGTLAL-CYNNIE-VFRGVVKMRRGM 317 (340)
Q Consensus 277 lp~~~~~~~~~~p~~~a~~~l~~-~~~~~d-v~~~~v~~~r~~ 317 (340)
+|+.....++.+++.++..++.. ..++++ ||++++++++++
T Consensus 225 l~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~v~~~r~~~~~~r 267 (267)
T PF00494_consen 225 LPPPRARPAVAAAAALYRAILDKLERNGYDPVFQRRVKVSKWR 267 (267)
T ss_dssp S--TTHHHHHHHHHHHHHHHHHHHHHTTT--GSSS-----HH-
T ss_pred cCCHhhhHHHHHHHHHHHHHHHHHHcCCCcccCCCCCcCCCCC
Confidence 94443355678888889988865 557899 889999999885
No 8
>KOG1459 consensus Squalene synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=7.2e-38 Score=291.52 Aligned_cols=316 Identities=61% Similarity=0.997 Sum_probs=284.5
Q ss_pred hhhcChhhHHHHHHHH-HhhcccccCCCCchhHHHHHHHHhhcCCCHHHHHHhcChhhhhHHHHHHHHHhhhhhccCCCC
Q 019466 6 AVLRHPDDLYPLLKLK-MASRQAEKQIPPEPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTS 84 (340)
Q Consensus 6 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~c~~ilr~~s~sfyla~~lLP~~~R~av~alYAf~R~~DdI~D~~~ 84 (340)
.++.||+++++++|++ +..-+.-.+.++ ..+..|.+++..+|+||...+.-++.+.|++++.+|...|.+|++.|+.+
T Consensus 2 ~~l~~p~e~~~l~~~k~~~l~~~~eq~~~-~~~~~Cy~~l~~tsrsfa~Vi~~l~~elRNav~ifylVlraLdtvedd~s 80 (413)
T KOG1459|consen 2 ALLWHPEESYNLLKMKKLPLVRVLEQSPL-PLLSPCYNLLNLTSRSFAAVIQELSSELRNAVCIFYLVLRALDTVEDDMS 80 (413)
T ss_pred ccccChhhhcCchhhccCCcchhhhcCCc-hHHHHHHHHHHhhcchHHHHHHhhCHHHhhhhheeeeehhhhccCCCCCc
Confidence 5789999999999996 222222245455 88999999999999999999999999999999999999999999999999
Q ss_pred CChhhhHHHHHHHHHHHcccccccccCCcchhHHHhhHHHHHHHHHhcChhHHHHHHHHHHhhhhHHHhhhhhhcCCHHH
Q 019466 85 IPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDD 164 (340)
Q Consensus 85 ~~~~~~~~~L~~w~~~l~~~~~~~~~g~~~~~~l~~~l~~v~~~~~~~~~~~~~li~~~~~~~~~g~~~Dl~~~~~t~~e 164 (340)
.|.+.|...|..+...+....|.|.++.+.+..+...++.+..+|..+.+.+++.|.++.++|..||...+....+|..|
T Consensus 81 I~~d~kvpil~~fhk~i~~~~w~f~~s~~k~r~~l~qf~~v~~ef~~L~e~Yqeviaeitk~mg~Gma~~~~~~v~ti~d 160 (413)
T KOG1459|consen 81 IPLDKKVPILRVFHKQIYLVDWQFRESSPKDRQLLPQFVVVSGEFLNLGEGYQEVIAEITKRMGLGMALFIPEEVETIWD 160 (413)
T ss_pred ccccccccHHHHHHHHHhhcCceecCCChhhhhhccccccchHHHHHhhHHHHHHHHHHHHHHhchHHHhhHHHHhHHHH
Confidence 98888889999999999998999986777777888889999999999999999999999999999999998888999999
Q ss_pred HHHHHHhhhhHHHHHHHHHhcccCCCC--CChhHHHHHHHHHHHHHHHHhchhhhhccCCCCcccccHHHHHhcCCChhh
Q 019466 165 YDEYCYYVAGLVGLGLSKLFYASGTED--LAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLED 242 (340)
Q Consensus 165 L~~Yc~~vAg~VG~l~~~il~~~~~~~--~~~~~~A~~lG~AlQltNiLRDi~eD~~~~~~GR~YLP~d~L~~~gv~~ed 242 (340)
...||.+|||-||.-++.++..+..++ .+..+.++.+|..||.|||+||..||.. -||-|+|.++|.++--.-+|
T Consensus 161 ~d~yChyvagLVg~glsrlf~~s~le~~~~~~e~l~ns~glfLqktnIirdy~ed~~---d~r~Fwp~eIwg~y~d~L~d 237 (413)
T KOG1459|consen 161 YDVYCHYVAGLVGIGLSRLFTASKLEDLLARLEQLSNSMGLFLQKTNIIRDYLEDPV---DGRPFWPREIWGKYMDKLKD 237 (413)
T ss_pred HHHHHHHHHHhhCCchHhhhhHHHHhhhhhhHHHHhcccchHHHHhHHHHHHHhccc---cCCccChHHHHHHHHHHHHh
Confidence 999999999999999999998743332 2234788999999999999999999999 79999999999998666788
Q ss_pred hhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhhhhHHHHHHHHHHHhcCCCccccccccCHHHHHHHH
Q 019466 243 LKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDHAIFRFCAIPQIMAIGTLALCYNNIEVFRGVVKMRRGMILILN 322 (340)
Q Consensus 243 l~~~~~~~~~~~~i~~~~~~a~~~l~~a~~~~~~lp~~~~~~~~~~p~~~a~~~l~~~~~~~dv~~~~v~~~r~~~~~~l 322 (340)
+..+++++....++.++++.|..|......|...+...+++.||++|..++++|+...++|-+||+++|+++++....+.
T Consensus 238 ~~~~en~dl~l~Cln~m~tnaL~hv~d~l~yls~l~~qsvfnfcaipqimai~Tlal~~nn~dvfrG~VklrkGl~~~~I 317 (413)
T KOG1459|consen 238 FRYPENDDLALQCLNEMVTNALMHVPDVLTYLSKLRTQSVFNFCAIPQIMAIATLALCYNNEDVFRGNVKLRKGLAVELI 317 (413)
T ss_pred hhCccchhHHHHHHHHHHHHHhhccHHHHHHHhhcccHHHHHHHHHHHHHHHHHHHHHhcCHhHhccceeecCCchHHHH
Confidence 99999999999999999999999999999999999988889999999999999999999999999999999998876665
Q ss_pred HHH
Q 019466 323 MYF 325 (340)
Q Consensus 323 ~~~ 325 (340)
+++
T Consensus 318 ~~~ 320 (413)
T KOG1459|consen 318 LAS 320 (413)
T ss_pred Hhc
Confidence 544
No 9
>KOG4411 consensus Phytoene/squalene synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=2.8e-31 Score=234.01 Aligned_cols=268 Identities=14% Similarity=0.113 Sum_probs=212.3
Q ss_pred chhHHHHHHHHhhcCCCHHHHHHhcChhhhhHHHHHHHHHhhhhhccCCCCCChhhhHHHHHHHHHHHcccccccccCCc
Q 019466 34 EPHWAFCYSMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTK 113 (340)
Q Consensus 34 ~~~~~~c~~ilr~~s~sfyla~~lLP~~~R~av~alYAf~R~~DdI~D~~~~~~~~~~~~L~~w~~~l~~~~~~~~~g~~ 113 (340)
..+.. |.+.+++.++..|++.+.+|.+.|.++++|.|||.++..|+=+....+.+..++|+||+|.+++ +|. ..|
T Consensus 9 ~~A~s-c~~~vr~ydy~~ylc~l~lp~e~r~aafaLrAfNVE~ar~~~d~~~~p~ia~mRL~fW~daIdk---~y~-~~p 83 (292)
T KOG4411|consen 9 RSALS-CVQQVRNYDYHHYLCLLELPTEMRKAAFALRAFNVELARIKVDTRKGPAIAMMRLQFWKDAIDK---IYG-ISP 83 (292)
T ss_pred hhHHH-HHHHHHhhhHHHHHHHHhCcHHHHHHHHHHHHhhHHHHHHhhccccCcHHHHHHHHHHHHHHHH---HcC-CCC
Confidence 34555 9999999999999999999999999999999999999996544444567889999999999998 564 223
Q ss_pred ---chhHHHhhHHHHHHHHHhcCh-hHHHHHHHHHHhhhhHHHhhhh-hhcCCHHHHHHHHHhhhhHHHHHHHHHhcccC
Q 019466 114 ---EYKVLMDQFHHVSTAFLELGK-GYQDAIEDITKRMGAGMAKFIC-KEVESIDDYDEYCYYVAGLVGLGLSKLFYASG 188 (340)
Q Consensus 114 ---~~~~l~~~l~~v~~~~~~~~~-~~~~li~~~~~~~~~g~~~Dl~-~~~~t~~eL~~Yc~~vAg~VG~l~~~il~~~~ 188 (340)
+++|++.++-..+... ...+ .+..++ ++++.|.. +.|++..||++|.+.+-|++-.+.+...|
T Consensus 84 ~~v~~qPva~aL~~~~~~~-~~nk~~L~rlV--------~aR~r~~~d~~fesI~eLeeY~e~TissLL~l~l~agg--- 151 (292)
T KOG4411|consen 84 LPVPRQPVAIALCSFAAGH-NANKDMLLRLV--------EARQRTIGDRQFESINELEEYGESTISSLLCLQLDAGG--- 151 (292)
T ss_pred CCCCCcHHHHHHHHHHhcc-ccCHHHHHHHH--------HHhhcCCcccchHHHHHHHHHHHhHHHHHHHHHHHhcC---
Confidence 5667887777776653 3333 334444 49999874 78999999999999977777666666665
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhchhhhhccCCCCcccccHHHHHhcCCChhhhh-cccCCHHHHHHHHHHHHHHHHHH
Q 019466 189 TEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLK-YEENSDKAVQCLNDMVTNALMHV 267 (340)
Q Consensus 189 ~~~~~~~~~A~~lG~AlQltNiLRDi~eD~~~~~~GR~YLP~d~L~~~gv~~edl~-~~~~~~~~~~~i~~~~~~a~~~l 267 (340)
...+.++++|.|+|.|.+++|+||.++.... +|-+|||.|+|..||+++++++ .....+++..++++++..|..|+
T Consensus 152 ~~~~~AdhaAshlGkA~gia~llrs~p~~~~---r~~~~iPadv~~lhGvtq~~il~~k~~~~g~~~~~fd~as~an~hL 228 (292)
T KOG4411|consen 152 KVLPMADHAASHLGKAYGIANLLRSTPPLLA---RGIVLIPADVMSLHGVTQLDILYKKKKLDGMVGMTFDLASEANRHL 228 (292)
T ss_pred ccccchHHHHHHHhHHHHHHHHHHhccHHHh---CCCccccHHHHHHcCCCHHHHHhhccchhhhhhHHHHHHHHHHHHH
Confidence 4556688999999999999999999999999 9999999999999999997655 56678899999999999999999
Q ss_pred HHHHHHHHhccccccchhhhhhHHHHHHHH----H-HHhcCCCccccccccC-HH-HHHHHHHHHhc
Q 019466 268 EDCLKYMSALRDHAIFRFCAIPQIMAIGTL----A-LCYNNIEVFRGVVKMR-RG-MILILNMYFFK 327 (340)
Q Consensus 268 ~~a~~~~~~lp~~~~~~~~~~p~~~a~~~l----~-~~~~~~dv~~~~v~~~-r~-~~~~~l~~~~~ 327 (340)
..|+.....+|+.. .|+.++..+. + +.++|||+|++...-+ .. -+..++||+|.
T Consensus 229 ~~AR~l~~kVP~~v------rp~ll~tv~td~~l~~l~k~nfdi~~p~~~~R~~L~lp~lLfw~sl~ 289 (292)
T KOG4411|consen 229 IDARSLIEKVPKAV------RPALLATVTTDYILKTLEKNNFDIYSPHLQRRNPLLLPSLLFWRSLC 289 (292)
T ss_pred HHHHhHhhhCCHHH------HHHHHHhhhHHHHHHHHHHccccccCHhhhcCCcccccHHHHHHHHH
Confidence 99999999999873 3444444333 2 4568999998732222 22 34556777764
No 10
>cd00867 Trans_IPPS Trans-Isoprenyl Diphosphate Synthases. Trans-Isoprenyl Diphosphate Synthases (Trans_IPPS) of class 1 isoprenoid biosynthesis enzymes which either synthesis geranyl/farnesyl diphosphates (GPP/FPP) or longer chained products from isoprene precursors, isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), or use geranyl (C10)-, farnesyl (C15)-, or geranylgeranyl (C20)-diphosphate as substrate. These enzymes produce a myriad of precursors for such end products as steroids, cholesterol, sesquiterpenes, heme, carotenoids, retinoids, diterpenes, ubiquinone, and archaeal ether linked lipids; and are widely distributed among archaea, bacteria, and eukareya. The enzymes in this family share the same 'isoprenoid synthase fold' and include the head-to-tail (HT) IPPS which catalyze the successive 1'-4 condensation of the 5-carbon IPP to the growing isoprene chain to form linear, all-trans, C10-, C15-, C20- C25-, C30-, C35-, C40-, C45-, or C50-isoprenoid diphosphates
Probab=99.81 E-value=2.4e-19 Score=164.09 Aligned_cols=169 Identities=24% Similarity=0.253 Sum_probs=126.0
Q ss_pred CHHHHHHhcCh----------hhhhHHHHHHHHHhhhhhccCCCCCChhhhHHHHHH-HHHHHcccccccccCCcchhHH
Q 019466 50 SFALVIQQLGT----------DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIA-FHRHVYDREWHFSCGTKEYKVL 118 (340)
Q Consensus 50 sfyla~~lLP~----------~~R~av~alYAf~R~~DdI~D~~~~~~~~~~~~L~~-w~~~l~~~~~~~~~g~~~~~~l 118 (340)
+|++++.++|+ ..+.++..+|+||+..|||.|+...+. .+.....+ |...... . ..+.++
T Consensus 1 ~r~~~~~~~~~~~~~~~~~~~~~a~ave~l~~~~li~DDI~D~~~~rr-g~~~~~~~~~g~~~ai----~----~gd~l~ 71 (236)
T cd00867 1 SRPLLVLLLARALGGDLEAALRLAAAVELLHAASLVHDDIVDDSDLRR-GKPTAHLRRFGNALAI----L----AGDYLL 71 (236)
T ss_pred CcHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHcccccCCccCC-CCccHhHHhhCHhHHH----H----HHHHHH
Confidence 47888999999 999999999999999999999976532 33345555 6554332 1 124456
Q ss_pred HhhHHHHHHHHHhcChhHHHHHHHHHHhhhhHHHhhhh-hh--cCCHHHHHHHHHh-hhhHHHHHHHHHhcccCCCC---
Q 019466 119 MDQFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFIC-KE--VESIDDYDEYCYY-VAGLVGLGLSKLFYASGTED--- 191 (340)
Q Consensus 119 ~~~l~~v~~~~~~~~~~~~~li~~~~~~~~~g~~~Dl~-~~--~~t~~eL~~Yc~~-vAg~VG~l~~~il~~~~~~~--- 191 (340)
..++..+.+.. .....+++.+.+..|++|+..|+. .. +.|++++.+||++ ||+.+|.++..+....+.+.
T Consensus 72 ~~a~~~l~~~~---~~~~~~~~~~~~~~~~~Gq~~Dl~~~~~~~~t~~~y~~~~~~Kta~l~~~~~~~~~~~~~~~~~~~ 148 (236)
T cd00867 72 ARAFQLLARLG---YPRALELFAEALRELLEGQALDLEFERDTYETLDEYLEYCRYKTAGLVGLLCLLGAGLSGADDEQA 148 (236)
T ss_pred HHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHhccHHHHHHHHHHHHHHcCcCHHHH
Confidence 66666555410 112234444566677779999996 44 8999999999999 99999998887765433221
Q ss_pred CChhHHHHHHHHHHHHHHHHhchhhhh----------ccCCCCcccccHHHH
Q 019466 192 LAPDSLSNSMGLFLQKTNIIRDYLEDI----------NEIPKCRMFWPREIW 233 (340)
Q Consensus 192 ~~~~~~A~~lG~AlQltNiLRDi~eD~----------~~~~~GR~YLP~d~L 233 (340)
.....++.++|+|+|++|+++|+.+|. . .||+|||.+.+
T Consensus 149 ~~~~~~~~~lG~a~Qi~dd~~D~~~d~~~~gk~~~D~~---~gr~tlp~~~~ 197 (236)
T cd00867 149 EALKDYGRALGLAFQLTDDLLDVFGDAEELGKVGSDLR---EGRITLPVILA 197 (236)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccCChHHHCccHHHHH---cCCchHHHHHH
Confidence 224578999999999999999999988 7 89999999987
No 11
>cd00385 Isoprenoid_Biosyn_C1 Isoprenoid Biosynthesis enzymes, Class 1. Superfamily of trans-isoprenyl diphosphate synthases (IPPS) and class I terpene cyclases which either synthesis geranyl/farnesyl diphosphates (GPP/FPP) or longer chained products from isoprene precursors, isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), or use geranyl (C10)-, farnesyl (C15)-, or geranylgeranyl (C20)-diphosphate as substrate. These enzymes produce a myriad of precursors for such end products as steroids, cholesterol, sesquiterpenes, heme, carotenoids, retinoids, and diterpenes; and are widely distributed among archaea, bacteria, and eukaryota.The enzymes in this superfamily share the same 'isoprenoid synthase fold' and include several subgroups. The head-to-tail (HT) IPPS catalyze the successive 1'-4 condensation of the 5-carbon IPP to the growing isoprene chain to form linear, all-trans, C10-, C15-, C20- C25-, C30-, C35-, C40-, C45-, or C50-isoprenoid diphosphates. Cyclic monoter
Probab=99.73 E-value=5.2e-17 Score=145.71 Aligned_cols=217 Identities=22% Similarity=0.169 Sum_probs=159.7
Q ss_pred CHHHHHHhcCh--hhhhHHHHHHHHHhhhhhccCCCCCChhhhHHHHHHHHHHHcccccccccCCcchhHHHhhHHHHHH
Q 019466 50 SFALVIQQLGT--DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVST 127 (340)
Q Consensus 50 sfyla~~lLP~--~~R~av~alYAf~R~~DdI~D~~~~~~~~~~~~L~~w~~~l~~~~~~~~~g~~~~~~l~~~l~~v~~ 127 (340)
+|++++.+.|+ +.|..+..+|+|++.+|||.|+.+... .+.....+| ...+.. .. ..+...++...+..+..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DDi~D~~~~~~-~~~~~~~~~--~~~~~~--~~-~~~~~~~~~~~~~~~~~ 74 (243)
T cd00385 1 FRPLAVLLEPEASRLRAAVEKLHAASLVHDDIVDDSGTRR-GLPTAHLAV--AIDGLP--EA-ILAGDLLLADAFEELAR 74 (243)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCC-CchhhhhhH--HhcCch--HH-HHHHHHHHHHHHHHHHh
Confidence 47889999999 999999999999999999999887543 333344454 111100 00 11223344444444433
Q ss_pred HHHhcChhHHHHHHHHHHhhhhHHHhhhh-hh--cCCHHHHHHHHHhh-hhHHHHHHHHHhcccCCC---CCChhHHHHH
Q 019466 128 AFLELGKGYQDAIEDITKRMGAGMAKFIC-KE--VESIDDYDEYCYYV-AGLVGLGLSKLFYASGTE---DLAPDSLSNS 200 (340)
Q Consensus 128 ~~~~~~~~~~~li~~~~~~~~~g~~~Dl~-~~--~~t~~eL~~Yc~~v-Ag~VG~l~~~il~~~~~~---~~~~~~~A~~ 200 (340)
. .+....+.+.+.+.++..|+..|+. .. ++|++|+..||+.+ ++++|.++....+..+.. ......++.+
T Consensus 75 ~---~~~~~~~~~~~~~~~~~~g~~~d~~~~~~~~~t~~ey~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (243)
T cd00385 75 E---GSPEALEILAEALLDLLEGQLLDLKWRREYVPTLEEYLEYCRYKTAGLVGALCLLGAGLSGGEAELLEALRKLGRA 151 (243)
T ss_pred C---CCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 2 1122334444556667779999996 33 89999999999999 888888887777643211 1223578899
Q ss_pred HHHHHHHHHHHhchhhhhccCCC--CcccccHHHHHhcCCChhhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 019466 201 MGLFLQKTNIIRDYLEDINEIPK--CRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALR 278 (340)
Q Consensus 201 lG~AlQltNiLRDi~eD~~~~~~--GR~YLP~d~L~~~gv~~edl~~~~~~~~~~~~i~~~~~~a~~~l~~a~~~~~~lp 278 (340)
+|.++|++|.++|+..|.. . |++++|...+.++|++.+++.....++.+.+++..+...++..+.+..+....++
T Consensus 152 ~g~~~ql~nDl~~~~~e~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 228 (243)
T cd00385 152 LGLAFQLTNDLLDYEGDAE---RGEGKCTLPVLYALEYGVPAEDLLLVEKSGSLEEALEELAKLAEEALKELNELILSLP 228 (243)
T ss_pred HHHHHHHHHHHHhccCCHH---HhCCchHHHHHHHHHhCChhhHHHHHHHCChHHHHHHHHHHHHHHHHHHHhcCCCCcH
Confidence 9999999999999999998 6 8999999999999999999888888888999999999999888887776665554
No 12
>KOG1459 consensus Squalene synthetase [Lipid transport and metabolism]
Probab=99.20 E-value=2.6e-10 Score=107.63 Aligned_cols=253 Identities=9% Similarity=-0.033 Sum_probs=171.2
Q ss_pred HHHhhcCCCHHHHHHhcChhhhhHHHHHHHHHhhhhhccCCCCCChhhhHHHHHHHHHHHcccccccccCCcchhHHHhh
Q 019466 42 SMLHKVSRSFALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ 121 (340)
Q Consensus 42 ~ilr~~s~sfyla~~lLP~~~R~av~alYAf~R~~DdI~D~~~~~~~~~~~~L~~w~~~l~~~~~~~~~g~~~~~~l~~~ 121 (340)
+++...-+.++.+...+-.+.++.++..|-+||.++.+++.+-. .-.-.+.|+.|....++ ++. +.+ ++-.
T Consensus 134 eviaeitk~mg~Gma~~~~~~v~ti~d~d~yChyvagLVg~gls-rlf~~s~le~~~~~~e~---l~n-s~g----lfLq 204 (413)
T KOG1459|consen 134 EVIAEITKRMGLGMALFIPEEVETIWDYDVYCHYVAGLVGIGLS-RLFTASKLEDLLARLEQ---LSN-SMG----LFLQ 204 (413)
T ss_pred HHHHHHHHHHhchHHHhhHHHHhHHHHHHHHHHHHHHhhCCchH-hhhhHHHHhhhhhhHHH---Hhc-ccc----hHHH
Confidence 55566666788998888888899999999999999999997542 22233455556555554 232 222 2111
Q ss_pred HHHHHHHHHhcC---hhHH-HHHHHHHHhhhhHHHhh-hh-hhcCCHHHHHHHHHhhhhHHHHHHHHHhcc--cCCCCCC
Q 019466 122 FHHVSTAFLELG---KGYQ-DAIEDITKRMGAGMAKF-IC-KEVESIDDYDEYCYYVAGLVGLGLSKLFYA--SGTEDLA 193 (340)
Q Consensus 122 l~~v~~~~~~~~---~~~~-~li~~~~~~~~~g~~~D-l~-~~~~t~~eL~~Yc~~vAg~VG~l~~~il~~--~~~~~~~ 193 (340)
=...++.|...+ ++|- +.| .|+-.| +. -.+++.+|+--||+++++|+|+|-.+..-. ++..++.
T Consensus 205 ktnIirdy~ed~~d~r~Fwp~eI--------wg~y~d~L~d~~~~en~dl~l~Cln~m~tnaL~hv~d~l~yls~l~~qs 276 (413)
T KOG1459|consen 205 KTNIIRDYLEDPVDGRPFWPREI--------WGKYMDKLKDFRYPENDDLALQCLNEMVTNALMHVPDVLTYLSKLRTQS 276 (413)
T ss_pred HhHHHHHHHhccccCCccChHHH--------HHHHHHHHHhhhCccchhHHHHHHHHHHHHHhhccHHHHHHHhhcccHH
Confidence 122233333222 3442 344 388888 54 589999999999999999999986655422 2233334
Q ss_pred hhHHHHHHHHHHHHHHHHhchhhhhccCCCCcccccHHHHHhcCCChhhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 019466 194 PDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKY 273 (340)
Q Consensus 194 ~~~~A~~lG~AlQltNiLRDi~eD~~~~~~GR~YLP~d~L~~~gv~~edl~~~~~~~~~~~~i~~~~~~a~~~l~~a~~~ 273 (340)
....|-..|++-|.||+|++..+|.. +|++|||. |.+.+.++.+...++++.++......++..++.+.+.
T Consensus 277 vfnfcaipqimai~Tlal~~nn~dvf---rG~Vklrk------Gl~~~~I~~~k~~~~v~~~f~~y~~~i~~k~d~~dpn 347 (413)
T KOG1459|consen 277 VFNFCAIPQIMAIATLALCYNNEDVF---RGNVKLRK------GLAVELILASKTMDKVRNIFYMYLRDIRMKFDEADPN 347 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHhHh---ccceeecC------CchHHHHHhcccHHHHHHHHHHHHHHHHhhCCccCCC
Confidence 45778889999999999999999999 99999998 9999999999999999999999988888877766644
Q ss_pred HHhccccccchhhhhhHHHHHHHH----HHHhcCCCccccccccCHHHHHHHHHHH
Q 019466 274 MSALRDHAIFRFCAIPQIMAIGTL----ALCYNNIEVFRGVVKMRRGMILILNMYF 325 (340)
Q Consensus 274 ~~~lp~~~~~~~~~~p~~~a~~~l----~~~~~~~dv~~~~v~~~r~~~~~~l~~~ 325 (340)
.-.|.... .+|..-++... .++.+.++.|.+++.+..-.++..+-.+
T Consensus 348 flklsask-----~~qv~esl~~~~~~~~il~n~~~~f~k~~~v~~V~~i~al~~a 398 (413)
T KOG1459|consen 348 FLKLSASK-----TEQVWESLLLYRRPDEILANRYNNFTKRIYVGFVKKIAALPLA 398 (413)
T ss_pred chhhhhhh-----HHHHHHHHHHhhccccccccccccccchhHHHHHHHHHHHHHH
Confidence 33332111 12211122111 1334566788888777766555443333
No 13
>TIGR02749 prenyl_cyano solanesyl diphosphate synthase. Members of this family all are from cyanobacteria or plastid-containing eukaryotes. A member from Arabidopsis (where both plastoquinone and ubiquinone contain the C(45) prenyl moiety) was characterized by heterologous expression as a solanesyl diphosphate synthase.
Probab=95.35 E-value=1.3 Score=42.70 Aligned_cols=141 Identities=20% Similarity=0.108 Sum_probs=76.5
Q ss_pred HHHHHHHHHhhhhHHHhhhhh---hcCCHHHHHHHHHhhhhHHHHHHHHHhcc-cCCCC---CChhHHHHHHHHHHHHHH
Q 019466 137 QDAIEDITKRMGAGMAKFICK---EVESIDDYDEYCYYVAGLVGLGLSKLFYA-SGTED---LAPDSLSNSMGLFLQKTN 209 (340)
Q Consensus 137 ~~li~~~~~~~~~g~~~Dl~~---~~~t~~eL~~Yc~~vAg~VG~l~~~il~~-~~~~~---~~~~~~A~~lG~AlQltN 209 (340)
.+.+.+.+..++.|...|+.. .-.|.++..+-+++=.|++...++.+-.. .|.++ .....++.++|.|+|+.+
T Consensus 135 ~~~~~~~~~~~~~Gq~~~~~~~~~~~~~~~~y~~~~~~KTa~L~~~~~~~ga~~ag~~~~~~~~l~~~G~~lG~aFQi~D 214 (322)
T TIGR02749 135 VKLISKVITDFAEGEIKQGLNQFDSDLSLEDYLEKSFYKTASLVAASSKAAAVLSDVPSQVANDLYEYGKHLGLAFQVVD 214 (322)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccCCCCCHHHHHHHHHccHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445556677787666642 23466666655555555555544433221 22221 123478899999999998
Q ss_pred HHhc-----------hhhhhccCCCCcccccHHHHHhcCCChhhhhc-ccC-CHHHHHH---------HHHHHHHHHHHH
Q 019466 210 IIRD-----------YLEDINEIPKCRMFWPREIWSKYVNKLEDLKY-EEN-SDKAVQC---------LNDMVTNALMHV 267 (340)
Q Consensus 210 iLRD-----------i~eD~~~~~~GR~YLP~d~L~~~gv~~edl~~-~~~-~~~~~~~---------i~~~~~~a~~~l 267 (340)
=+.| ++.|+. .|.+-+|.=..-+..-....++. ... .+.+..+ +...-..++.+.
T Consensus 215 Dild~~~~~~~~GK~~g~Dl~---~Gk~Tlp~l~al~~~~~~~~~l~~~~~~~~~~~~~~~~i~~~ga~~~a~~~~~~~~ 291 (322)
T TIGR02749 215 DILDFTGSTEQLGKPAGSDLM---KGNLTAPVLFALEEEPKLSELIEREFSQKGDLEQALSLVRKSGGIKKARELAKEQA 291 (322)
T ss_pred HhccCCCChHhhCCChhHHHh---CCCchHHHHHHHhcChHHHHHHHhccCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 7777 467888 79888885322221111111221 111 1122222 233334466677
Q ss_pred HHHHHHHHhcccc
Q 019466 268 EDCLKYMSALRDH 280 (340)
Q Consensus 268 ~~a~~~~~~lp~~ 280 (340)
++|...+..+|..
T Consensus 292 ~~A~~~L~~lp~~ 304 (322)
T TIGR02749 292 QLALQSLSFLPPS 304 (322)
T ss_pred HHHHHHHHhCCCC
Confidence 7777777777654
No 14
>PLN02890 geranyl diphosphate synthase
Probab=95.33 E-value=0.77 Score=45.98 Aligned_cols=141 Identities=15% Similarity=0.131 Sum_probs=82.1
Q ss_pred HHHHHHHHHhhhhHHHhhhhh---hcCCHHHHHHHHHhhhhHHHHHHHHHhcc-cCCCCC---ChhHHHHHHHHHHHHHH
Q 019466 137 QDAIEDITKRMGAGMAKFICK---EVESIDDYDEYCYYVAGLVGLGLSKLFYA-SGTEDL---APDSLSNSMGLFLQKTN 209 (340)
Q Consensus 137 ~~li~~~~~~~~~g~~~Dl~~---~~~t~~eL~~Yc~~vAg~VG~l~~~il~~-~~~~~~---~~~~~A~~lG~AlQltN 209 (340)
.+.+.+.+..|++|-..|+.. .-.|+++..+-.++=.|++...+|.+-+. .|.++. ....++.++|.|+|+.+
T Consensus 229 ~~~~s~a~~~l~~Gq~ld~~~~~~~~~s~~~Yl~~i~~KTa~Lf~~s~~~gAilaga~~~~~~~l~~fG~~lGlAFQI~D 308 (422)
T PLN02890 229 VSLLATAVEHLVTGETMQITSSREQRRSMDYYMQKTYYKTASLISNSCKAVAILAGQTAEVAVLAFEYGRNLGLAFQLID 308 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455566777787777752 34577777776666666666656544221 122221 13478899999999998
Q ss_pred HHhch-----------hhhhccCCCCcccccHHHHHhcCCChhhhh-cccCC-HHHHHH---------HHHHHHHHHHHH
Q 019466 210 IIRDY-----------LEDINEIPKCRMFWPREIWSKYVNKLEDLK-YEENS-DKAVQC---------LNDMVTNALMHV 267 (340)
Q Consensus 210 iLRDi-----------~eD~~~~~~GR~YLP~d~L~~~gv~~edl~-~~~~~-~~~~~~---------i~~~~~~a~~~l 267 (340)
=+-|+ +.|+. .|.+-+|.=..-+..-....+. .+..+ +.+..+ +..-...++.+.
T Consensus 309 DiLD~~g~~~~~GK~~g~DL~---eGk~TlPvl~al~~~~~l~~~l~~~~~~~~~v~~~~~~i~~~gaie~a~~la~~~~ 385 (422)
T PLN02890 309 DVLDFTGTSASLGKGSLSDIR---HGVITAPILFAMEEFPQLREVVDRGFDNPANVDIALEYLGKSRGIQRTRELAREHA 385 (422)
T ss_pred HHHhhcCChhhhCCCchhhHh---cCCccHHHHHHHhcCHHHHHHHhcccCCHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 88776 46787 7888888632222110011122 11111 122222 334445578888
Q ss_pred HHHHHHHHhcccc
Q 019466 268 EDCLKYMSALRDH 280 (340)
Q Consensus 268 ~~a~~~~~~lp~~ 280 (340)
++|...+..+|..
T Consensus 386 ~~A~~~L~~lp~s 398 (422)
T PLN02890 386 NLAAAAIESLPET 398 (422)
T ss_pred HHHHHHHHhCCCC
Confidence 8888888888765
No 15
>PRK10888 octaprenyl diphosphate synthase; Provisional
Probab=95.14 E-value=1.8 Score=41.70 Aligned_cols=140 Identities=12% Similarity=0.079 Sum_probs=83.2
Q ss_pred HHHHHHHHHhhhhHHHhhhh---hhcCCHHHHHHHHHhhhhHHHHHHHHHhcc-cCCCCC---ChhHHHHHHHHHHHHHH
Q 019466 137 QDAIEDITKRMGAGMAKFIC---KEVESIDDYDEYCYYVAGLVGLGLSKLFYA-SGTEDL---APDSLSNSMGLFLQKTN 209 (340)
Q Consensus 137 ~~li~~~~~~~~~g~~~Dl~---~~~~t~~eL~~Yc~~vAg~VG~l~~~il~~-~~~~~~---~~~~~A~~lG~AlQltN 209 (340)
.+.+.+.+..+..|-..|+. ..-.|.+++.+-+++=.|++..+++.+-.. .|.++. ....++.++|.|+|+.+
T Consensus 132 ~~~~~~~~~~~~~Gq~~d~~~~~~~~~s~~~y~~~i~~KTa~lf~~~~~~ga~lag~~~~~~~~l~~~g~~lG~aFQi~D 211 (323)
T PRK10888 132 LEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDYGRYLGTAFQLID 211 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555667778777774 245688888887788777887777664332 222221 12468899999999998
Q ss_pred HHhch-----------hhhhccCCCCcccccHHHHHhcCCChhh---h---hcccCC-HHHHHH---------HHHHHHH
Q 019466 210 IIRDY-----------LEDINEIPKCRMFWPREIWSKYVNKLED---L---KYEENS-DKAVQC---------LNDMVTN 262 (340)
Q Consensus 210 iLRDi-----------~eD~~~~~~GR~YLP~d~L~~~gv~~ed---l---~~~~~~-~~~~~~---------i~~~~~~ 262 (340)
=+-|+ +.|+. .|.+-+|.=..-+. .++++ + ...... +.+..+ +......
T Consensus 212 D~ld~~~~~~~~GK~~g~Dl~---~gk~Tlp~l~al~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~e~~~~~ 287 (323)
T PRK10888 212 DLLDYSADGETLGKNVGDDLN---EGKPTLPLLHAMHH-GTPEQAAMIRTAIEQGNGRHLLEPVLEAMNACGSLEWTRQR 287 (323)
T ss_pred HhhcccCChHhhCCCchhhhh---cCCchHHHHHHHHh-CCHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcChHHHHHHH
Confidence 77666 67888 79998985322221 12211 1 111111 222222 3333444
Q ss_pred HHHHHHHHHHHHHhcccc
Q 019466 263 ALMHVEDCLKYMSALRDH 280 (340)
Q Consensus 263 a~~~l~~a~~~~~~lp~~ 280 (340)
++.+..+|.+.+..+|..
T Consensus 288 a~~~~~~A~~~L~~lp~~ 305 (323)
T PRK10888 288 AEEEADKAIAALQVLPDT 305 (323)
T ss_pred HHHHHHHHHHHHhcCCCC
Confidence 667777777777777755
No 16
>cd00685 Trans_IPPS_HT Trans-Isoprenyl Diphosphate Synthases, head-to-tail. These trans-Isoprenyl Diphosphate Synthases (Trans_IPPS) catalyze head-to-tail (HT) (1'-4) condensation reactions. This CD includes all-trans (E)-isoprenyl diphosphate synthases which synthesize various chain length (C10, C15, C20, C25, C30, C35, C40, C45, and C50) linear isoprenyl diphosphates from precursors, isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). They catalyze the successive 1'-4 condensation of the 5-carbon IPP to allylic substrates geranyl-, farnesyl-, or geranylgeranyl-diphosphate. Isoprenoid chain elongation reactions proceed via electrophilic alkylations in which a new carbon-carbon single bond is generated through interaction between a highly reactive electron-deficient allylic carbocation and an electron-rich carbon-carbon double bond. The catalytic site consists of a large central cavity formed by mostly antiparallel alpha helices with two aspartate-rich regions (DDXX(XX
Probab=94.95 E-value=2.3 Score=39.48 Aligned_cols=126 Identities=14% Similarity=0.083 Sum_probs=73.9
Q ss_pred HHHHHHHHhhhhHHHhhhhh---hcCCHHHHHHHHHhhhhHHHHHHHHHhcc-cCCCC---CChhHHHHHHHHHHHHHHH
Q 019466 138 DAIEDITKRMGAGMAKFICK---EVESIDDYDEYCYYVAGLVGLGLSKLFYA-SGTED---LAPDSLSNSMGLFLQKTNI 210 (340)
Q Consensus 138 ~li~~~~~~~~~g~~~Dl~~---~~~t~~eL~~Yc~~vAg~VG~l~~~il~~-~~~~~---~~~~~~A~~lG~AlQltNi 210 (340)
+.+.+....+..|-..|+.. ...|+++..+-+..-.|+...+++.+.+. .+.+. .....++.++|.|+|+.|=
T Consensus 111 ~~~~~~~~~~~~GQ~~d~~~~~~~~~~~~~y~~~~~~KT~~l~~~~~~~~a~l~~~~~~~~~~l~~~g~~lG~afQi~DD 190 (259)
T cd00685 111 ELFSEAILELVEGQLLDLLSEYDTDVTEEEYLRIIRLKTAALFAAAPLLGALLAGADEEEAEALKRFGRNLGLAFQIQDD 190 (259)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555677788888852 25789999888888888776666654432 12111 1234789999999999988
Q ss_pred HhchhhhhccCCCCcccccHHHHHhcCCChhhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 019466 211 IRDYLEDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDH 280 (340)
Q Consensus 211 LRDi~eD~~~~~~GR~YLP~d~L~~~gv~~edl~~~~~~~~~~~~i~~~~~~a~~~l~~a~~~~~~lp~~ 280 (340)
+.|+-.|... .|+- .-+|+.+|+.+=-+.-+ +-..+..+..++...++.+|..
T Consensus 191 ~ld~~~~~~~--~gK~------------~~~Di~~gk~T~~~~~~---l~~~~~~~~~~a~~~l~~~~~~ 243 (259)
T cd00685 191 ILDLFGDPET--LGKP------------VGSDLREGKCTLPVLLA---LRELAREYEEKALEALKALPES 243 (259)
T ss_pred hhcccCChHH--HCCC------------cchHHHcCCchHHHHHH---HHHHHHHHHHHHHHHHHcCCCc
Confidence 8877543321 1221 01233333322111111 1455666677777777777754
No 17
>TIGR02748 GerC3_HepT heptaprenyl diphosphate synthase component II. Members of this family are component II of the heterodimeric heptaprenyl diphosphate synthase. The trusted cutoff was set such that all members identified are encoded near to a recognizable gene for component I (in Pfam family pfam07307). This enzyme acts in menaquinone-7 isoprenoid side chain biosynthesis.
Probab=94.62 E-value=2.7 Score=40.40 Aligned_cols=140 Identities=13% Similarity=0.040 Sum_probs=79.0
Q ss_pred HHHHHHHHhhhhHHHhhhh---hhcCCHHHHHHHHHhhhhHHHHHHHHHhcc-cCCCCC---ChhHHHHHHHHHHHHHHH
Q 019466 138 DAIEDITKRMGAGMAKFIC---KEVESIDDYDEYCYYVAGLVGLGLSKLFYA-SGTEDL---APDSLSNSMGLFLQKTNI 210 (340)
Q Consensus 138 ~li~~~~~~~~~g~~~Dl~---~~~~t~~eL~~Yc~~vAg~VG~l~~~il~~-~~~~~~---~~~~~A~~lG~AlQltNi 210 (340)
+.+.+.+..++.|-..|+. +.-.|.++..+-++.-.|++...+|.+-.. .|.++. ....++.++|.|+|+.|=
T Consensus 132 ~~~~~~~~~~~~Gq~~~~~~~~~~~~~~~~Y~~~i~~KTa~L~~~~~~~ga~~ag~~~~~~~~l~~~g~~lG~aFQI~DD 211 (319)
T TIGR02748 132 QILSHTIVEVCRGEIEQIKDKYNFDQNLRTYLRRIKRKTALLIAASCQLGAIASGANEAIVKKLYWFGYYVGMSYQITDD 211 (319)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555667778777764 234577776666666667665555544221 122221 134688999999999988
Q ss_pred Hhch-----------hhhhccCCCCcccccHHHHHhcCCChhh---hhcccCCHHHHHH---------HHHHHHHHHHHH
Q 019466 211 IRDY-----------LEDINEIPKCRMFWPREIWSKYVNKLED---LKYEENSDKAVQC---------LNDMVTNALMHV 267 (340)
Q Consensus 211 LRDi-----------~eD~~~~~~GR~YLP~d~L~~~gv~~ed---l~~~~~~~~~~~~---------i~~~~~~a~~~l 267 (340)
+.|+ +.|+. .|..-+|.=..-+..-..+. +......+.+..+ +..-...+..+.
T Consensus 212 ilD~~~~~~~~GK~~~~Dl~---~gk~Tlp~l~al~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~g~~~~a~~~a~~~~ 288 (319)
T TIGR02748 212 ILDFVGTEEELGKPAGGDLL---QGNVTLPVLYAMEDPFLKKRIEQVLEETTAEEMEPLIEEVKKSDAIEYAYAVSDRYL 288 (319)
T ss_pred HHHccCCHHhhCCChhhHHh---CCCchHHHHHHhcCcchhHHHHHHHcCCCHHHHHHHHHHHHHcCcHHHHHHHHHHHH
Confidence 8876 47788 79988886433321111111 1111112222222 222334466777
Q ss_pred HHHHHHHHhcccc
Q 019466 268 EDCLKYMSALRDH 280 (340)
Q Consensus 268 ~~a~~~~~~lp~~ 280 (340)
.+|...+..+|..
T Consensus 289 ~~A~~~L~~lp~~ 301 (319)
T TIGR02748 289 KKALELLDGLPDG 301 (319)
T ss_pred HHHHHHHhcCCCC
Confidence 7777777777654
No 18
>CHL00151 preA prenyl transferase; Reviewed
Probab=93.78 E-value=4.3 Score=39.13 Aligned_cols=136 Identities=17% Similarity=0.120 Sum_probs=69.7
Q ss_pred HHHHhhhhHHHhhhhh---hcCCHHHHHHHHHhhhhHHHHHHHHHhcc-cCCCCC---ChhHHHHHHHHHHHHHHHHhch
Q 019466 142 DITKRMGAGMAKFICK---EVESIDDYDEYCYYVAGLVGLGLSKLFYA-SGTEDL---APDSLSNSMGLFLQKTNIIRDY 214 (340)
Q Consensus 142 ~~~~~~~~g~~~Dl~~---~~~t~~eL~~Yc~~vAg~VG~l~~~il~~-~~~~~~---~~~~~A~~lG~AlQltNiLRDi 214 (340)
+.+..+..|-..+... .-.|.++...=+++=.|++..+++.+-.. .|.++. ....++.++|.|+|+.+=+-|+
T Consensus 141 ~~~~~l~~G~~~~~~~~~~~~~~~~~yl~~i~~KTa~L~~~~~~~ga~lag~~~~~~~~l~~~G~~lG~aFQi~DDilD~ 220 (323)
T CHL00151 141 KVITDFAEGEIRQGLVQFDTTLSILNYIEKSFYKTASLIAASCKAAALLSDADEKDHNDFYLYGKHLGLAFQIIDDVLDI 220 (323)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3444455565444321 22344444443334344444444433211 122211 2347889999999999877774
Q ss_pred -----------hhhhccCCCCcccccHHHHHhcCCChhhhh-cccC-CHHHHHH---------HHHHHHHHHHHHHHHHH
Q 019466 215 -----------LEDINEIPKCRMFWPREIWSKYVNKLEDLK-YEEN-SDKAVQC---------LNDMVTNALMHVEDCLK 272 (340)
Q Consensus 215 -----------~eD~~~~~~GR~YLP~d~L~~~gv~~edl~-~~~~-~~~~~~~---------i~~~~~~a~~~l~~a~~ 272 (340)
+.|+. .|++-+|.=..-+..-....+. .... .+.+.++ +.+....+..+.++|.+
T Consensus 221 ~~~~~~~GK~~g~Dl~---eGk~Tlp~l~al~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~g~~~~a~~~a~~~~~~A~~ 297 (323)
T CHL00151 221 TSSTESLGKPIGSDLK---NGNLTAPVLFALTQNSKLAKLIEREFCETKDISQALQIIKETNGIEKAKDLALEHMQAAIQ 297 (323)
T ss_pred ccChhhhCCCchhhHh---cCchHHHHHHHHhcChHHHHHHHHhcCCHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHH
Confidence 67888 7999888532222110111111 1111 1222222 34444557788888888
Q ss_pred HHHhcccc
Q 019466 273 YMSALRDH 280 (340)
Q Consensus 273 ~~~~lp~~ 280 (340)
.+..+|..
T Consensus 298 ~L~~lp~~ 305 (323)
T CHL00151 298 CLKFLPPS 305 (323)
T ss_pred HHHhCCCC
Confidence 88888754
No 19
>PLN02857 octaprenyl-diphosphate synthase
Probab=92.21 E-value=2.5 Score=42.35 Aligned_cols=142 Identities=16% Similarity=0.124 Sum_probs=78.1
Q ss_pred HHHHHHHHHHhhhhHHHhhhh---hhcCCHHHHHHHHHhhhhHHHHHHHHHhcc-cCCCCC---ChhHHHHHHHHHHHHH
Q 019466 136 YQDAIEDITKRMGAGMAKFIC---KEVESIDDYDEYCYYVAGLVGLGLSKLFYA-SGTEDL---APDSLSNSMGLFLQKT 208 (340)
Q Consensus 136 ~~~li~~~~~~~~~g~~~Dl~---~~~~t~~eL~~Yc~~vAg~VG~l~~~il~~-~~~~~~---~~~~~A~~lG~AlQlt 208 (340)
..+++.+.+.++..|...++. ..-.|.+++.+-.++=.|.+...++.+-.. .|.++. ....++.++|.|+|+.
T Consensus 228 ~~~~~s~~~~~l~~Gei~q~~~~~~~~~s~~~Yl~~i~~KTa~L~~~a~~~gallaga~~~~~~~l~~fG~~LGiAFQI~ 307 (416)
T PLN02857 228 VIKLISQVIKDFASGEIKQASSLFDCDVTLDEYLLKSYYKTASLIAASTKSAAIFSGVDSSVKEQMYEYGKNLGLAFQVV 307 (416)
T ss_pred HHHHHHHHHHHHHhhHHHHHhcccCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 334455555566677655543 233467776666666666665555443221 222221 2347889999999999
Q ss_pred HHHhc-----------hhhhhccCCCCcccccHHHHHhcCCChhhhhc-cc-CCHHHHHH---------HHHHHHHHHHH
Q 019466 209 NIIRD-----------YLEDINEIPKCRMFWPREIWSKYVNKLEDLKY-EE-NSDKAVQC---------LNDMVTNALMH 266 (340)
Q Consensus 209 NiLRD-----------i~eD~~~~~~GR~YLP~d~L~~~gv~~edl~~-~~-~~~~~~~~---------i~~~~~~a~~~ 266 (340)
+=+.| ++.|+. .|.+-+|.=.--+..-...+++. .. ..+.+.++ +.+-...++.+
T Consensus 308 DDiLD~~~~~~~~GK~~g~DL~---eGK~TlPli~al~~~~~l~~~l~~~~~~~~~~~~~~~lv~~~Ggie~a~~~a~~~ 384 (416)
T PLN02857 308 DDILDFTQSTEQLGKPAGSDLA---KGNLTAPVIFALEKEPELREIIESEFCEEGSLEEAIELVNEGGGIERAQELAKEK 384 (416)
T ss_pred HHHHhhcCCHHHhCCCcchhhh---cCCccHHHHHHHhcChHHHHHHhhccCCHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 77777 457888 79998885321111101112221 11 11222222 33334446777
Q ss_pred HHHHHHHHHhcccc
Q 019466 267 VEDCLKYMSALRDH 280 (340)
Q Consensus 267 l~~a~~~~~~lp~~ 280 (340)
.++|.+.+..+|..
T Consensus 385 ~~~A~~~L~~Lp~~ 398 (416)
T PLN02857 385 ADLAIQNLECLPRG 398 (416)
T ss_pred HHHHHHHHHhCCCC
Confidence 77777777778755
No 20
>PF00348 polyprenyl_synt: Polyprenyl synthetase; InterPro: IPR000092 A variety of isoprenoid compounds are synthesized by various organisms. For example in eukaryotes the isoprenoid biosynthetic pathway is responsible for the synthesis of a variety of end products including cholesterol, dolichol, ubiquinone or coenzyme Q. In bacteria this pathway leads to the synthesis of isopentenyl tRNA, isoprenoid quinones, and sugar carrier lipids. Among the enzymes that participate in that pathway, are a number of polyprenyl synthetase enzymes which catalyze a 1'4-condensation between 5 carbon isoprene units. It has been shown [, , , , ] that all the above enzymes share some regions of sequence similarity. Two of these regions are rich in aspartic-acid residues and could be involved in the catalytic mechanism and/or the binding of the substrates.; GO: 0008299 isoprenoid biosynthetic process; PDB: 3AQC_B 3AQB_D 3Q1O_C 3LLW_B 3EFQ_A 3EGT_A 3DYG_A 2P1C_A 2OGD_A 2EWG_B ....
Probab=91.98 E-value=3.4 Score=38.39 Aligned_cols=58 Identities=16% Similarity=0.150 Sum_probs=43.0
Q ss_pred cCCHHHHHHHHHhhhhHHHHHHHHHhcc-cCCCC---CChhHHHHHHHHHHHHHHHHhchhh
Q 019466 159 VESIDDYDEYCYYVAGLVGLGLSKLFYA-SGTED---LAPDSLSNSMGLFLQKTNIIRDYLE 216 (340)
Q Consensus 159 ~~t~~eL~~Yc~~vAg~VG~l~~~il~~-~~~~~---~~~~~~A~~lG~AlQltNiLRDi~e 216 (340)
..|++++.+-++.-.|++..+.+.+-.. .|.+. .....++.++|.|+|+.|=+.|+-.
T Consensus 132 ~~~~~~y~~i~~~KTg~l~~~~~~~ga~lag~~~~~~~~l~~~g~~lG~afQi~DD~~d~~~ 193 (260)
T PF00348_consen 132 DPTEEEYLEIIRLKTGSLFALACQLGAILAGADEEQIEALREFGRHLGIAFQIRDDLLDLFG 193 (260)
T ss_dssp STSHHHHHHHHHHHTHHHHHHHHHHHHHHTTSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cccHHHHHHHHhhcchHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHhhhhhhhhccC
Confidence 7799999999999889888887766543 22221 1234788999999999987777664
No 21
>PRK10581 geranyltranstransferase; Provisional
Probab=89.48 E-value=4.3 Score=38.72 Aligned_cols=110 Identities=18% Similarity=0.171 Sum_probs=69.2
Q ss_pred hhhhHHHhhhh--hhcCCHHHHHHHHHhhhhHHHHHHHHHhcc-cCCCC----CChhHHHHHHHHHHHHHHHHhchh---
Q 019466 146 RMGAGMAKFIC--KEVESIDDYDEYCYYVAGLVGLGLSKLFYA-SGTED----LAPDSLSNSMGLFLQKTNIIRDYL--- 215 (340)
Q Consensus 146 ~~~~g~~~Dl~--~~~~t~~eL~~Yc~~vAg~VG~l~~~il~~-~~~~~----~~~~~~A~~lG~AlQltNiLRDi~--- 215 (340)
.|+.|-..|+. ....|.+++.+-+++=.|++..+++.+-.. .|.++ .....++.++|.|+|+.+=+.|+-
T Consensus 153 ~l~~GQ~ld~~~~~~~~~~~~y~~i~~~KTa~L~~~~~~~gailag~~~~~~~~~l~~~g~~lG~aFQI~DDilD~~g~~ 232 (299)
T PRK10581 153 GMCGGQALDLEAEGKQVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDRYAESIGLAFQVQDDILDVVGDT 232 (299)
T ss_pred hhhHhhHHHHhccCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHccccCCh
Confidence 36677777774 235678888877776666665555543221 22221 113468899999999999888873
Q ss_pred --------hhhccCCCCcccccHHHHHhcCCChhhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 019466 216 --------EDINEIPKCRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSALRDH 280 (340)
Q Consensus 216 --------eD~~~~~~GR~YLP~d~L~~~gv~~edl~~~~~~~~~~~~i~~~~~~a~~~l~~a~~~~~~lp~~ 280 (340)
.|.. .|++-+|. .-.++..-..++.+..+|...+..+|..
T Consensus 233 ~~~GK~~g~Dl~---~gk~T~p~----------------------l~~~e~a~~~a~~~~~~A~~~l~~l~~~ 280 (299)
T PRK10581 233 ATLGKRQGADQQ---LGKSTYPA----------------------LLGLEQARKKARDLIDDARQSLDQLAAQ 280 (299)
T ss_pred HHHCCCcchhhh---cCCCCHHH----------------------HHHHHHHHHHHHHHHHHHHHHHHhCcCC
Confidence 4444 45554443 2233445556778888888888888754
No 22
>PF06330 TRI5: Trichodiene synthase (TRI5); InterPro: IPR024652 This family consists of several fungal trichodiene synthase proteins (EC:4.2.3.6). TRI5 encodes the enzyme trichodiene synthase, which has been shown to catalyse the first step in the trichothecene pathways of Fusarium and Trichothecium species [, ].; GO: 0045482 trichodiene synthase activity, 0016106 sesquiterpenoid biosynthetic process; PDB: 1YYT_A 2PS5_A 2AEL_A 1YYS_A 1YJ4_A 2Q9Y_A 2PS4_A 2AEK_B 1KIY_B 2PS7_A ....
Probab=88.64 E-value=10 Score=37.33 Aligned_cols=175 Identities=12% Similarity=0.047 Sum_probs=93.5
Q ss_pred HHHHHhcChhhhhHHHHHHHHHhhhhhccCCCCCChhhhHHHHHHHHHHHcccccccccCCcchhHHHhhHHHHHHHHHh
Q 019466 52 ALVIQQLGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVSTAFLE 131 (340)
Q Consensus 52 yla~~lLP~~~R~av~alYAf~R~~DdI~D~~~~~~~~~~~~L~~w~~~l~~~~~~~~~g~~~~~~l~~~l~~v~~~~~~ 131 (340)
..+-..+|.+.+-.|...+++.-.+||+.++.. ..+..|.+.+-. |.+..+|++..+.........
T Consensus 75 ~~~y~~~~~evqv~IaiyT~yvi~iDD~~~~~~-------~~l~~F~~~l~~-------Gq~Q~~p~L~~~~~~L~~~~~ 140 (376)
T PF06330_consen 75 VYCYPHLPKEVQVAIAIYTTYVIIIDDSSQEPS-------DDLRTFHQRLIL-------GQPQKHPLLDGFASLLREMWR 140 (376)
T ss_dssp HHHSTTS-HHHHHHHHHHHHHHHHHTT--S-SH-------HHHTTHHHHHHH-------T---SSHHHHHHHHHHHHHHT
T ss_pred EeecCCCCHHHHHHHHHHHHHHHhccccccccc-------HHHHHHHHHHhc-------CCCCCCHHHHHHHHHHHHHHH
Confidence 456678899999999999999999999977643 134445555543 555567888888888776544
Q ss_pred cChhH-HHHHHHHHHhhhhHH--Hhhhhh---hcCCHHHHHHHHHhhhhHHHHHHHHHhcccCCCCCChhHHHHHHHHHH
Q 019466 132 LGKGY-QDAIEDITKRMGAGM--AKFICK---EVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDLAPDSLSNSMGLFL 205 (340)
Q Consensus 132 ~~~~~-~~li~~~~~~~~~g~--~~Dl~~---~~~t~~eL~~Yc~~vAg~VG~l~~~il~~~~~~~~~~~~~A~~lG~Al 205 (340)
.-.++ ..+|-.-+-+++.|. |....+ .=.++.+..+=..+++.+.+.++-+--.. .+......+...+....
T Consensus 141 ~fgpf~anmI~~STLdFi~g~~LE~~~f~~~p~A~~FP~fLR~ktGlsEaYA~FiFPk~~f--pe~~~~~~y~~AIpdl~ 218 (376)
T PF06330_consen 141 HFGPFCANMIVKSTLDFINGCWLEQKNFHGSPGAPDFPDFLRRKTGLSEAYAFFIFPKALF--PEVEYFIQYTPAIPDLM 218 (376)
T ss_dssp TS-HHHHHHHHHHHHHHHHHHHHHTTT----TT-TTHHHHHHHHHH-HHHHHHHT--TTTS---TTTTHHHHHHHHHHHH
T ss_pred HcchHHHHHHHHHHHHHHHHHHhhcccCCCCCCCccccHHHHhccCcchhheeeecccccC--ChHHHHHHHHHHHHHHH
Confidence 43443 333332222222232 221111 23467777777777777776665433221 11122335556778888
Q ss_pred HHHHHHhchhhhhccCC--CCc-ccccHHHHHhcCCChhhh
Q 019466 206 QKTNIIRDYLEDINEIP--KCR-MFWPREIWSKYVNKLEDL 243 (340)
Q Consensus 206 QltNiLRDi~eD~~~~~--~GR-~YLP~d~L~~~gv~~edl 243 (340)
..+|++-||--=+.|+. ..+ -|+ ...-.-+|++..+-
T Consensus 219 ~fi~~~NDILSFYKE~l~a~E~~NyI-~n~A~~~g~S~~ea 258 (376)
T PF06330_consen 219 RFINYVNDILSFYKEELVAGETGNYI-HNRARVHGVSILEA 258 (376)
T ss_dssp HHHHHHHHHHHHHHHHTTSSSSSSHH-HHHHHHHT--HHHH
T ss_pred HHHHhhhhHHHHHHhhcccccccchh-hhhhhccCCCHHHH
Confidence 88899999862221100 234 355 44566678886654
No 23
>cd00868 Terpene_cyclase_C1 Terpene cyclases, Class 1. Terpene cyclases, Class 1 (C1) of the class 1 family of isoprenoid biosynthesis enzymes, which share the 'isoprenoid synthase fold' and convert linear, all-trans, isoprenoids, geranyl (C10)-, farnesyl (C15)-, or geranylgeranyl (C20)-diphosphate into numerous cyclic forms of monoterpenes, diterpenes, and sesquiterpenes. Also included in this CD are the cis-trans terpene cyclases such as trichodiene synthase. The class I terpene cyclization reactions proceed via electrophilic alkylations in which a new carbon-carbon single bond is generated through interaction between a highly reactive electron-deficient allylic carbocation and an electron-rich carbon-carbon double bond. The catalytic site consists of a large central cavity formed by mostly antiparallel alpha helices with two aspartate-rich regions located on opposite walls. These residues mediate binding of prenyl phosphates via bridging Mg2+ ions, inducing proposed conformational ch
Probab=76.73 E-value=61 Score=29.69 Aligned_cols=182 Identities=15% Similarity=-0.001 Sum_probs=90.0
Q ss_pred HHHHHHhcChh----hhhHHHHHHHHHhhhhhccCCCCCChhhhHHHHHHHHHHHcccccccccCCc-chhHHHhhHHHH
Q 019466 51 FALVIQQLGTD----LRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTK-EYKVLMDQFHHV 125 (340)
Q Consensus 51 fyla~~lLP~~----~R~av~alYAf~R~~DdI~D~~~~~~~~~~~~L~~w~~~l~~~~~~~~~g~~-~~~~l~~~l~~v 125 (340)
.++++...|.. .+..++-+.+|.-.+||+-|+..... . ...+.+.+.........+.| ...|+..++.++
T Consensus 33 ~~~~a~~~p~~~~~~~l~~~a~~~~~~f~~DD~~D~~~~~~-~----~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~d~ 107 (284)
T cd00868 33 YFWAAGSYFEPQYSEARIALAKTIALLTVIDDTYDDYGTLE-E----LELFTEAVERWDISAIDELPEYMKPVFKALYDL 107 (284)
T ss_pred HHHHHHhhcCccchHHHHHHHHHHHHHHHHHhccccCCCHH-H----HHHHHHHHHhcChhhhhhCCHHHHHHHHHHHHH
Confidence 35666666644 67778888899999999999855321 1 12222222210000010222 235677777666
Q ss_pred HHHHHhcC------hhHHHHHHHHHHhhhhHHHhhhh----hhcCCHHHHHHHHHhhhhHHHHHHHHHhcccCCCCC---
Q 019466 126 STAFLELG------KGYQDAIEDITKRMGAGMAKFIC----KEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTEDL--- 192 (340)
Q Consensus 126 ~~~~~~~~------~~~~~li~~~~~~~~~g~~~Dl~----~~~~t~~eL~~Yc~~vAg~VG~l~~~il~~~~~~~~--- 192 (340)
..+..... .....+++ -+..+..++..... ..++|.+|...+-..++|.--.+.+--++. |..-+
T Consensus 108 ~~r~~~~~~~~~~~~~~~r~~~-~~~~~~~~~~~e~~~~~~~~~p~~~eYl~~R~~~~g~~~~~~l~~~~~-g~~l~~~~ 185 (284)
T cd00868 108 VNEIEEELAKEGGSESLPYLKE-AWKDLLRAYLVEAKWANEGYVPSFEEYLENRRVSIGYPPLLALSFLGM-GDILPEEA 185 (284)
T ss_pred HHHHHHHHHHhcCchHHHHHHH-HHHHHHHHHHHHHHHHHCCCCCCHHHHHHhceehhhHHHHHHHHHHHc-CCCCCHHH
Confidence 65443221 11222332 22233335444442 247777777666666655433222222221 11111
Q ss_pred -----ChhHHHHHHHHHHHHHHHHhchhhhhccCCCCcc-cccHHHHHhcCCChhh
Q 019466 193 -----APDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRM-FWPREIWSKYVNKLED 242 (340)
Q Consensus 193 -----~~~~~A~~lG~AlQltNiLRDi~eD~~~~~~GR~-YLP~d~L~~~gv~~ed 242 (340)
....+....+...-++|=+-....... .|.+ -+..=.+.++|++.++
T Consensus 186 ~~~~~~~~~l~~~~~~~~~l~NDl~S~~kE~~---~g~~~N~v~vl~~~~~~~~~e 238 (284)
T cd00868 186 FEWLPSYPKLVRASSTIGRLLNDIASYEKEIA---RGEVANSVECYMKEYGVSEEE 238 (284)
T ss_pred HHHhhhhHHHHHHHHHHHHHhccchHHHHHHc---cCCcccHHHHHHhccCCCHHH
Confidence 112344455555666665656656665 6765 4555567777877554
No 24
>cd00686 Terpene_cyclase_cis_trans_C1 Cis, Trans, Terpene Cyclases, Class 1. This CD includes the terpenoid cyclase, trichodiene synthase, which catalyzes the cyclization of farnesyl diphosphate (FPP) to trichodiene using a cis-trans pathway, and is the first committed step in the biosynthesis of trichothecene toxins and antibiotics. As with other enzymes with the 'terpenoid synthase fold', this enzyme has two conserved metal binding motifs that coordinate Mg2+ ion-bridged binding of the diphosphate moiety of FPP. Metal-triggered substrate ionization initiates catalysis, and the alpha-barrel active site serves as a template to channel and stabilize the conformations of reactive carbocation intermediates through a complex cyclization cascade. These enzymes function as homodimers and are found in several genera of fungi.
Probab=75.45 E-value=33 Score=33.46 Aligned_cols=169 Identities=12% Similarity=0.076 Sum_probs=90.3
Q ss_pred cChhhhhHHHHHHHHHhhhhhccCCCCCChhhhHHHHHHHHHHHcccccccccCCcchhHHHhh----HHHHHHHHHhcC
Q 019466 58 LGTDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQ----FHHVSTAFLELG 133 (340)
Q Consensus 58 LP~~~R~av~alYAf~R~~DdI~D~~~~~~~~~~~~L~~w~~~l~~~~~~~~~g~~~~~~l~~~----l~~v~~~~~~~~ 133 (340)
.+++...++..-|.+.-.+||+.|+... .|..|.+.|.. |.+..||++.. |..+.+.|+..-
T Consensus 81 ~skev~~~isi~~tY~~~lDD~~~e~~~-------~m~~f~~dL~~-------G~~qkhP~l~~v~~~l~~~lr~fGpF~ 146 (357)
T cd00686 81 VSKECMADLSIHYTYTLVLDDSKDDPYP-------TMVNYFDDLQA-------GREQAHPWWALVNEHFPNVLRHFGPFC 146 (357)
T ss_pred CCHHHHHHHHHHHheeeEecccccccch-------HHHHHHHHHhc-------CCCCCCcHHHHHHHHHHHHHHHhhhhh
Confidence 6899999999999999999999998652 45556666654 66666775443 445555554322
Q ss_pred hhHHHHHHHHHHhhhhHHHhhh--hhhcCCHHHHHHHHHhhhhHHHHHHHHHhcccCCCC-CChhHHHHHHHHHHHHHHH
Q 019466 134 KGYQDAIEDITKRMGAGMAKFI--CKEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTED-LAPDSLSNSMGLFLQKTNI 210 (340)
Q Consensus 134 ~~~~~li~~~~~~~~~g~~~Dl--~~~~~t~~eL~~Yc~~vAg~VG~l~~~il~~~~~~~-~~~~~~A~~lG~AlQltNi 210 (340)
. .+|-.-+-+++.|.-... ...++.-.+.=.|-+...|.-.-..+-+|-.+-.++ .....+..++...+...|.
T Consensus 147 s---~~IikSTLdFv~g~~iEq~nf~~~p~A~~fP~ylR~ksGl~E~yA~FiFPk~~FpE~~~~~qi~~AIp~~~~~i~~ 223 (357)
T cd00686 147 S---LNLIRSTLDFFEGCWIEQYNFGGFPGSHDYPQFLRRMNGLGHCVGASLWPKEQFNERSLFLEITSAIAQMENWMVW 223 (357)
T ss_pred H---HHHHHHHHHHHHHHHHhhhccCCCCCCcccchHHHhccCCcceeEEEecchhhCchHhhHHHhhHHHHHHHHHHHh
Confidence 1 111111111222322221 133555555666666666644333333342210011 1112344477777777777
Q ss_pred HhchhhhhccCC--CCcccccHHHHHhcCCChhhh
Q 019466 211 IRDYLEDINEIP--KCRMFWPREIWSKYVNKLEDL 243 (340)
Q Consensus 211 LRDi~eD~~~~~--~GR~YLP~d~L~~~gv~~edl 243 (340)
+-||--=+.|+. ..|+-+=.-...-+|+|..+-
T Consensus 224 ~NDILSFYKEe~~~~E~~n~V~Nya~~~GiS~~eA 258 (357)
T cd00686 224 VNDLMSFYKEFDDERDQISLVKNYVVSDEISLHEA 258 (357)
T ss_pred hhhhhheehhhcccccccchHHHhhhhcCCCHHHH
Confidence 778763333211 333433334455688886654
No 25
>COG0142 IspA Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism]
Probab=71.22 E-value=1e+02 Score=29.69 Aligned_cols=137 Identities=15% Similarity=0.135 Sum_probs=77.7
Q ss_pred HHHHHHHhhhhHHHhhhh--hhcCCHHHHHHHHHhhhhHHHHHHHHHhcc-cCCCC---CChhHHHHHHHHHHHHHHHHh
Q 019466 139 AIEDITKRMGAGMAKFIC--KEVESIDDYDEYCYYVAGLVGLGLSKLFYA-SGTED---LAPDSLSNSMGLFLQKTNIIR 212 (340)
Q Consensus 139 li~~~~~~~~~g~~~Dl~--~~~~t~~eL~~Yc~~vAg~VG~l~~~il~~-~~~~~---~~~~~~A~~lG~AlQltNiLR 212 (340)
.+.+-+..|+.|-..|+. ....|.+++.+=.+.=.|.....++.+-+. .+.+. .....++..+|.|+|+.+=+=
T Consensus 138 ~~~~~~~~~~~GQ~lDl~~~~~~~t~e~y~~~i~~KTa~L~~~a~~~ga~la~~~~~~~~~l~~~g~~lGlaFQi~DDiL 217 (322)
T COG0142 138 ALAEAINGLCGGQALDLAFENKPVTLEEYLRVIELKTAALFAAAAVLGAILAGADEELLEALEDYGRNLGLAFQIQDDIL 217 (322)
T ss_pred HHHHHHHHHHHhHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhHHHHHHHHhh
Confidence 333455567778888885 234677777776666666666666555433 22221 123578999999999997666
Q ss_pred chh-----------hhhccCCCCcccccHHHHHhcCCChhh-hhccc-CCHHHHHH---------HHHHHHHHHHHHHHH
Q 019466 213 DYL-----------EDINEIPKCRMFWPREIWSKYVNKLED-LKYEE-NSDKAVQC---------LNDMVTNALMHVEDC 270 (340)
Q Consensus 213 Di~-----------eD~~~~~~GR~YLP~d~L~~~gv~~ed-l~~~~-~~~~~~~~---------i~~~~~~a~~~l~~a 270 (340)
|+- .|+. .|.+-+|.=..-+.+-..+. +.... ....+.++ +..-...+..+..+|
T Consensus 218 D~~~d~~~lGK~~g~Dl~---~gK~T~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~a 294 (322)
T COG0142 218 DITGDEEELGKPVGSDLK---EGKPTLPVLLALEKANEDQKLLRILLEGGGEVEEALELLRKSGAIEYAKNLAKTYVEKA 294 (322)
T ss_pred cCCCChHHhCCCcchHHH---cCCchHHHHHHHHcCchhhHHHHHHhhcchHHHHHHHHHHHcchHHHHHHHHHHHHHHH
Confidence 654 4566 57777776544343322110 10000 00022222 122233477777888
Q ss_pred HHHHHhcc
Q 019466 271 LKYMSALR 278 (340)
Q Consensus 271 ~~~~~~lp 278 (340)
...++.+|
T Consensus 295 ~~~L~~l~ 302 (322)
T COG0142 295 KEALEKLP 302 (322)
T ss_pred HHHHHhCC
Confidence 88887777
No 26
>PF03936 Terpene_synth_C: Terpene synthase family, metal binding domain; InterPro: IPR005630 Sequences containing this domain belong to the terpene synthase family. It has been suggested that this gene family be designated tps (for terpene synthase). Sequence comparisons reveal similarities between the monoterpene (C10) synthases, sesquiterpene (C15) synthases and the diterpene (C20) synthases. It has been split into six subgroups on the basis of phylogeny, called Tpsa-Tpsf []. Tpsa includes vetispiridiene synthase Q39979 from SWISSPROT, 5-epi- aristolochene synthase, Q40577 from SWISSPROT and (+)-delta-cadinene synthase P93665 from SWISSPROT . Tpsb includes (-)-limonene synthase, Q40322 from SWISSPROT. Tpsc includes copalyl diphosphate synthase (kaurene synthase A), O04408 from SWISSPROT. Tpsd includes taxadiene synthase, Q41594 from SWISSPROT, pinene synthase, O24475 from SWISSPROT and myrcene synthase, O24474 from SWISSPROT. Tpse includes ent-kaurene synthase B Q39548 from SWISSPROT. Tpsf includes linalool synthase Q9ZPN5 from SWISSPROT. In the fungus Phaeosphaeria sp. (strain L487) the synthesis of ent-kaurene from geranylgeranyl dophosphate is promoted by a single bifunctional protein [].; GO: 0000287 magnesium ion binding, 0016829 lyase activity; PDB: 3PYB_A 3PYA_A 3G4F_A 3G4D_B 3CKE_A 2OA6_D 2E4O_B 3BNY_B 3BNX_A 3LG5_A ....
Probab=65.37 E-value=1.1e+02 Score=27.79 Aligned_cols=181 Identities=14% Similarity=0.022 Sum_probs=92.6
Q ss_pred HHHHHhcC--hhhhhHHHHHHHHHhhhhhccCCCCCChhhhHHHHHHHHHHHcccc-cccccCCcchhHHHhhHHHHHHH
Q 019466 52 ALVIQQLG--TDLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDRE-WHFSCGTKEYKVLMDQFHHVSTA 128 (340)
Q Consensus 52 yla~~lLP--~~~R~av~alYAf~R~~DdI~D~~~~~~~~~~~~L~~w~~~l~~~~-~~~~~g~~~~~~l~~~l~~v~~~ 128 (340)
.+++.+.| .+.+..++.+..|.-.+||+.|+... ... ++.+.+.+..-. .......+...|+..++..+..+
T Consensus 50 ~~aa~~~P~~~~~l~~~a~~~~w~f~~DD~~D~~~~--~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~r 124 (270)
T PF03936_consen 50 LLAARFYPDSSDELLAAADWMAWLFIFDDFFDDGGS--AEE---LEALTDAVERWDPNSGDPLPDPDKPLFRALADIWNR 124 (270)
T ss_dssp HHHHHHSGCGHHHHHHHHHHHHHHHHHHHHHHTTSH--HHH---HHHHHHHHHHTSSGGGGGSTHHHHHHHHHHHHHHHH
T ss_pred hhhheeCCCcHHHHHHHHhhchheeeeeeccccccc--hHH---HHHHHHHHhcccccccccccchhHHHHHHHHHHHHH
Confidence 34445555 35567888899999999999997652 122 444444444100 01111222344666667666655
Q ss_pred HHhcC-hh-HHH-----HHHHHHHhhhhHHHhhhh----hhcCCHHHHHHHHHhhhhHHHHHHHHHhccc---CCCCCC-
Q 019466 129 FLELG-KG-YQD-----AIEDITKRMGAGMAKFIC----KEVESIDDYDEYCYYVAGLVGLGLSKLFYAS---GTEDLA- 193 (340)
Q Consensus 129 ~~~~~-~~-~~~-----li~~~~~~~~~g~~~Dl~----~~~~t~~eL~~Yc~~vAg~VG~l~~~il~~~---~~~~~~- 193 (340)
..... .. ... ++..+ .+...|...... ..++|.+|...+=..++|.--.+.+-.++-. +....+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~ps~eeYl~~R~~t~g~~~~~~l~~~~~~~~~~~~~~~~ 203 (270)
T PF03936_consen 125 IAARMSPAQRRRDQIKRFRNSW-REYLNAYLWEARWRERGRIPSLEEYLEMRRHTSGVYPCLALIEFALEFALGELPPEV 203 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHTTS--SHHHHHHHHHHHTSHHHHHHHHHHHCSSCHTHHHHHH
T ss_pred HHHHhhhhhcccHHhhHHHHHH-HHHHHHHHHHHHHhccCCCCCHHHHHHhccccccccHHHHHHHHhCCCccccccHHH
Confidence 44221 11 122 22211 122223333322 2478888887777777776544444433210 100000
Q ss_pred ---hhHHHHHHHHHHHHHHHHhchhhhhccCCCCcc--cccHHHHHhcCCChhh
Q 019466 194 ---PDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRM--FWPREIWSKYVNKLED 242 (340)
Q Consensus 194 ---~~~~A~~lG~AlQltNiLRDi~eD~~~~~~GR~--YLP~d~L~~~gv~~ed 242 (340)
........+...-++|=|-....+.. .|.. +++. .+.++|++.++
T Consensus 204 ~~~~~~l~~~~~~~~~l~NDl~S~~KE~~---~g~~~N~v~~-l~~~~~~s~e~ 253 (270)
T PF03936_consen 204 LEHPPMLRRLAADIIRLVNDLYSYKKEIA---RGDVHNLVVV-LMNEHGLSLEE 253 (270)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHHHHHHH---TTSCCSHHHH-HHHHHTHHHHH
T ss_pred HHhchHHHHHHHHHHHHhcccchhhcchh---hcccccHHHH-hhhhcCCCHHH
Confidence 01144556777777787778878877 6765 4443 46666776554
No 27
>cd00687 Terpene_cyclase_nonplant_C1 Non-plant Terpene Cyclases, Class 1. This CD includes terpenoid cyclases such as pentalenene synthase and aristolochene synthase which, using an all-trans pathway, catalyze the ionization of farnesyl diphosphate, followed by the formation of a macrocyclic intermediate by bond formation between C1 with either C10 (aristolochene synthase) or C11 (pentalenene synthase), resulting in production of tricyclic hydrocarbon pentalenene or bicyclic hydrocarbon aristolochene. As with other enzymes with the 'terpenoid synthase fold', they have two conserved metal binding motifs, proposed to coordinate Mg2+ ion-bridged binding of the diphosphate moiety of FPP to the enzymes. Metal-triggered substrate ionization initiates catalysis, and the alpha-barrel active site serves as a template to channel and stabilize the conformations of reactive carbocation intermediates through a complex cyclization cascade. These enzymes function in the monomeric form and are found in
Probab=54.79 E-value=1.8e+02 Score=27.05 Aligned_cols=207 Identities=13% Similarity=0.015 Sum_probs=101.7
Q ss_pred HHHHHHhcChhhh---hHHHHHHHHHhhhhhccCCCCCChhhhHHHHHHHHHHHcccccccccCCcchhHHHhhHHHHHH
Q 019466 51 FALVIQQLGTDLR---NAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMDQFHHVST 127 (340)
Q Consensus 51 fyla~~lLP~~~R---~av~alYAf~R~~DdI~D~~~~~~~~~~~~L~~w~~~l~~~~~~~~~g~~~~~~l~~~l~~v~~ 127 (340)
..+++.+.|.... .-++-+..|.-..||.-|+...+++..........+.+.+.. .. +.....|+...+.++..
T Consensus 44 ~~~~a~~~P~a~~~~l~l~~~~~~w~f~~DD~~D~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~p~~~~~~d~~~ 120 (303)
T cd00687 44 GDLAALFYPDADDERLMLAADLMAWLFVFDDLLDRDQKSPEDGEAGVTRLLDILRGDG--LD-SPDDATPLEFGLADLWR 120 (303)
T ss_pred HHHHhhcCCCCCHHHHHHHHHHHHHHHHhcccCCccccCHHHHHHHHHHHHhccCCCC--CC-CCCCCCHHHHHHHHHHH
Confidence 3466667664433 334466788889999999863223222222222322232210 00 01233467777777766
Q ss_pred HHHhcC-h-hHHHHHHHHHHhhhhHHHhhhh----hhcCCHHHHHHHHHhhhhHHH-HHHHHHhcccCCC-----CCChh
Q 019466 128 AFLELG-K-GYQDAIEDITKRMGAGMAKFIC----KEVESIDDYDEYCYYVAGLVG-LGLSKLFYASGTE-----DLAPD 195 (340)
Q Consensus 128 ~~~~~~-~-~~~~li~~~~~~~~~g~~~Dl~----~~~~t~~eL~~Yc~~vAg~VG-~l~~~il~~~~~~-----~~~~~ 195 (340)
+..... . ....+++.+ ..+..|+..-.. ...+|+++...+-..+.|.-. ..++.+....... .+...
T Consensus 121 r~~~~~~~~~~~r~~~~~-~~~~~a~~~e~~~~~~~~~psl~eYl~~R~~~~g~~~~~~l~~~~~g~~lp~~~~~~~~~~ 199 (303)
T cd00687 121 RTLARMSAEWFNRFAHYT-EDYFDAYIWEGKNRLNGHVPDVAEYLEMRRFNIGADPCLGLSEFIGGPEVPAAVRLDPVMR 199 (303)
T ss_pred HhccCCCHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCCcCHHHHHHHhhhcccccccHHHHHHhcCCCCCHHHHhChHHH
Confidence 554332 2 222233222 222334333321 245676666655555544322 2222222210011 11122
Q ss_pred HHHHHHHHHHHHHHHHhchhhhh-ccCCCCcc-cccHHHHHhcCCChhhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 019466 196 SLSNSMGLFLQKTNIIRDYLEDI-NEIPKCRM-FWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVEDCLKY 273 (340)
Q Consensus 196 ~~A~~lG~AlQltNiLRDi~eD~-~~~~~GR~-YLP~d~L~~~gv~~edl~~~~~~~~~~~~i~~~~~~a~~~l~~a~~~ 273 (340)
.+-...+..+.++|=|-....+. + .|.. -+-.=.+.++|++.++ ..+.+..+.......|.++++.
T Consensus 200 ~l~~~~~~~~~l~NDl~S~~KE~~~---~g~~~N~V~vl~~~~g~s~~e---------A~~~~~~~~~~~~~~f~~~~~~ 267 (303)
T cd00687 200 ALEALASDAIALVNDIYSYEKEIKA---NGEVHNLVKVLAEEHGLSLEE---------AISVVRDMHNERITQFEELEAS 267 (303)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHh---CCccchHHHHHHHHcCCCHHH---------HHHHHHHHHHHHHHHHHHHHHh
Confidence 34556777777788777777777 5 6773 3333356678887654 3334555566666666655543
No 28
>TIGR01439 lp_hng_hel_AbrB looped-hinge helix DNA binding domain, AbrB family. This DNA-binding domain family includes AbrB, a transition state regulator in Bacillus subtilis, whose DNA-binding domain structure in solution was determined by NMR. The domain binds DNA as a dimer in what is termed a looped-hinge helix fold. Some members of the family have two copies of the domain in tandem. The domain is found usually at the N-terminus of a small protein. This model excludes members of family TIGR02609.
Probab=44.38 E-value=13 Score=23.90 Aligned_cols=20 Identities=35% Similarity=0.355 Sum_probs=17.3
Q ss_pred CCcccccHHHHHhcCCChhh
Q 019466 223 KCRMFWPREIWSKYVNKLED 242 (340)
Q Consensus 223 ~GR~YLP~d~L~~~gv~~ed 242 (340)
+||+.||.++.++.|+...+
T Consensus 6 kgri~iP~~~r~~l~~~~gd 25 (43)
T TIGR01439 6 KGQIVIPKEIREKLGLKEGD 25 (43)
T ss_pred CCeEEecHHHHHHcCcCCCC
Confidence 69999999999999987544
No 29
>PRK02899 adaptor protein; Provisional
Probab=38.51 E-value=38 Score=30.28 Aligned_cols=43 Identities=23% Similarity=0.193 Sum_probs=37.7
Q ss_pred CcccccHHHHHhcCCChhhhhcccCCHHHHHHHHHHHHHHHHHHH
Q 019466 224 CRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVE 268 (340)
Q Consensus 224 GR~YLP~d~L~~~gv~~edl~~~~~~~~~~~~i~~~~~~a~~~l~ 268 (340)
=||+|-.+.|...|++.+||..+ +++..++...+...|.....
T Consensus 11 Irv~it~~DL~eRgi~~~dL~~n--~~k~e~lF~~mm~Ea~~e~~ 53 (197)
T PRK02899 11 IKIFLTFDDLSERGLTKEDLWRD--APKVHQLFRDMMQEANKELG 53 (197)
T ss_pred EEEEEeHHHHHHcCCCHHHHhcC--cHHHHHHHHHHHHHhhhccC
Confidence 48999999999999999999865 58999999999999877654
No 30
>cd00684 Terpene_cyclase_plant_C1 Plant Terpene Cyclases, Class 1. This CD includes a diverse group of monomeric plant terpene cyclases (Tspa-Tspf) that convert the acyclic isoprenoid diphosphates, geranyl diphosphate (GPP), farnesyl diphosphate (FPP), or geranylgeranyl diphosphate (GGPP) into cyclic monoterpenes, diterpenes, or sesquiterpenes, respectively; a few form acyclic species. Terpnoid cyclases are soluble enzymes localized to the cytosol (sesquiterpene synthases) or plastids (mono- and diterpene synthases). All monoterpene and diterpene synthases have restrict substrate specificity, however, some sesquiterpene synthases can accept both FPP and GPP. The catalytic site consists of a large central cavity formed by mostly antiparallel alpha helices with two aspartate-rich regions located on opposite walls. These residues mediate binding of prenyl diphosphates, via bridging Mg2+ ions (K+ preferred by gymnosperm cyclases), inducing conformational changes such that an N-terminal regi
Probab=38.15 E-value=4.7e+02 Score=27.03 Aligned_cols=197 Identities=16% Similarity=0.082 Sum_probs=92.1
Q ss_pred HHHHhcCh--hhhhHHHHHHHHHhhhhhccCCCCCChhhhHHHHHHHHHHHcccccccc--cCCcc-hhHHHhhHHHHHH
Q 019466 53 LVIQQLGT--DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFS--CGTKE-YKVLMDQFHHVST 127 (340)
Q Consensus 53 la~~lLP~--~~R~av~alYAf~R~~DdI~D~~~~~~~~~~~~L~~w~~~l~~~~~~~~--~g~~~-~~~l~~~l~~v~~ 127 (340)
+|+.+-|. ..|-.+.-.-.+.-.+||+-|.... . ..++.+.+.+.. |... .+-|. ..++..++..+..
T Consensus 271 ~a~~feP~~s~~Rl~~aK~~~l~~~iDD~fD~~gt-~----eEl~~ft~ai~r--wd~~~~~~lPe~mk~~~~al~~~~~ 343 (542)
T cd00684 271 AGTYFEPQYSLARIALAKTIALITVIDDTYDVYGT-L----EELELFTEAVER--WDISAIDQLPEYMKIVFKALLNTVN 343 (542)
T ss_pred HhcccCccchHHHHHHHHHHHHHhhhHhhhccCCC-H----HHHHHHHHHHHh--ccccchhhccHHHHHHHHHHHHHHH
Confidence 34455552 3355666777788889999996542 2 234444444442 1100 02121 1245555554433
Q ss_pred HHHh----c-C-hhHHHHHHHHHHhhhhHHHhhhh----hhcCCHHHHHHHHHhhhhHHHHHHHHHhcccCCC-CCChh-
Q 019466 128 AFLE----L-G-KGYQDAIEDITKRMGAGMAKFIC----KEVESIDDYDEYCYYVAGLVGLGLSKLFYASGTE-DLAPD- 195 (340)
Q Consensus 128 ~~~~----~-~-~~~~~li~~~~~~~~~g~~~Dl~----~~~~t~~eL~~Yc~~vAg~VG~l~~~il~~~~~~-~~~~~- 195 (340)
.+.. . . .....+. +-+.+...|+-.... ...+|++|.......++|.--.++...++. |.. ..+..
T Consensus 344 ei~~~~~~~~~~~~~~~~~-~~~~~~~~a~l~EA~w~~~g~vPt~eEYl~~~~~S~g~~~~~~~~~~~~-g~~l~~e~~e 421 (542)
T cd00684 344 EIEEELLKEGGSYVVPYLK-EAWKDLVKAYLVEAKWAHEGYVPTFEEYMENALVSIGLGPLLLTSFLGM-GDILTEEAFE 421 (542)
T ss_pred HHHHHHHHhcCcchHHHHH-HHHHHHHHHHHHHHHHHhcCCCCCHHHHHhhhhHHhhHHHHHHHHHHhc-CCCCCHHHHH
Confidence 2111 0 0 1111122 222223335544442 357898888888777666554444444442 211 11111
Q ss_pred ------HHHHHHHHHHHHHHHHhchhhhhccCCCCcc-cccHHHHHhcCCChhhhhcccCCHHHHHHHHHHHHHHHHHHH
Q 019466 196 ------SLSNSMGLFLQKTNIIRDYLEDINEIPKCRM-FWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVE 268 (340)
Q Consensus 196 ------~~A~~lG~AlQltNiLRDi~eD~~~~~~GR~-YLP~d~L~~~gv~~edl~~~~~~~~~~~~i~~~~~~a~~~l~ 268 (340)
..-...+....+.|=+-....... +|-+ =.-.=.|.++|++.++ ..+-+..+++.+...+.
T Consensus 422 ~~~~~~~l~~~~~~i~rL~NDi~S~~kE~~---rGdv~n~V~~ymke~g~s~ee---------A~~~i~~~ie~~wk~ln 489 (542)
T cd00684 422 WLESRPKLVRASSTIGRLMNDIATYEDEMK---RGDVASSIECYMKEYGVSEEE---------AREEIKKMIEDAWKELN 489 (542)
T ss_pred HHhccHHHHHHHHHHHHHhcChhhhHHHHh---cCCcccHHHHHHHhcCCCHHH---------HHHHHHHHHHHHHHHHH
Confidence 111222222333333333333344 5663 4444467888887654 33445666666666555
Q ss_pred HH
Q 019466 269 DC 270 (340)
Q Consensus 269 ~a 270 (340)
+.
T Consensus 490 ~e 491 (542)
T cd00684 490 EE 491 (542)
T ss_pred HH
Confidence 43
No 31
>PRK02315 adaptor protein; Provisional
Probab=24.39 E-value=94 Score=28.52 Aligned_cols=43 Identities=16% Similarity=0.173 Sum_probs=37.3
Q ss_pred CcccccHHHHHhcCCChhhhhcccCCHHHHHHHHHHHHHHHHHHH
Q 019466 224 CRMFWPREIWSKYVNKLEDLKYEENSDKAVQCLNDMVTNALMHVE 268 (340)
Q Consensus 224 GR~YLP~d~L~~~gv~~edl~~~~~~~~~~~~i~~~~~~a~~~l~ 268 (340)
=||+|-.+.|...|++.+||..+ +++..++...+.+.|.....
T Consensus 11 IRv~it~~DL~eRGi~~~dL~~n--~~k~e~fF~~mm~Ea~~e~~ 53 (233)
T PRK02315 11 IKVFITYDDLEERGFEREDLLYN--REKIEEFFYSMMDEVDEEDD 53 (233)
T ss_pred EEEEecHHHHHHcCCCHHHHhcC--cHHHHHHHHHHHHHhccccC
Confidence 48999999999999999999855 58999999999999866553
Done!