BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019475
(340 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 34/183 (18%)
Query: 1 MKWAMRLRVALYLAQALEY----CSSKGRALYHDLNAYRILFDKDGNPRLSSFGL----- 51
+ W R R+AL A+ L Y C K ++ D+ A IL D++ + FGL
Sbjct: 136 LDWPKRQRIALGSARGLAYLHDHCDPK--IIHRDVKAANILLDEEFEAVVGDFGLAKLMD 193
Query: 52 MKNSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIR- 110
K+ + + PEY+ TG+ + ++ V+ +G MLL+L++G+ A DL R
Sbjct: 194 YKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR-----AFDLARL 248
Query: 111 -----------------SKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAK 153
K L+D L+G++ ++E +L+++A C QS ERP
Sbjct: 249 ANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS 308
Query: 154 SLV 156
+V
Sbjct: 309 EVV 311
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 24/178 (13%)
Query: 1 MKWAMRLRVALYLAQALEY----CSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK--- 53
+ W R R+AL A+ L Y C K ++ D+ A IL D++ + FGL K
Sbjct: 128 LDWPKRQRIALGSARGLAYLHDHCDPK--IIHRDVKAANILLDEEFEAVVGDFGLAKLMD 185
Query: 54 --NSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHAL----- 106
+ + + PEY+ TG+ + ++ V+ +G MLL+L++G+ L
Sbjct: 186 YKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 245
Query: 107 --------DLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 156
L++ K L+D L+G++ ++E +L+++A C QS ERP +V
Sbjct: 246 VMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 303
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 9/105 (8%)
Query: 1 MKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRD-G 58
M W RL + + A+ L Y + RA+ H D+ + IL D++ P+++ FG+ K + G
Sbjct: 136 MSWEQRLEICIGAARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELG 193
Query: 59 KSY-----STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 98
+++ L + PEY GR+T +S VYSFG +L ++L +
Sbjct: 194 QTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Query: 1 MKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRD-- 57
M W RL + + A+ L Y + RA+ H D+ + IL D++ P+++ FG+ K +
Sbjct: 136 MSWEQRLEICIGAARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELD 193
Query: 58 ----GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 98
L + PEY GR+T +S VYSFG +L ++L +
Sbjct: 194 QTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 82/175 (46%), Gaps = 27/175 (15%)
Query: 1 MKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--- 57
+ W MR ++A A + + + ++ D+ + IL D+ ++S FGL + S
Sbjct: 130 LSWHMRCKIAQGAANGINFLH-ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 58 ---GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF 114
A+ PE +R G +TP+S +YSFG +LL++++G +P A+D R
Sbjct: 189 TVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG--LP---AVDEHREPQL 242
Query: 115 LLLMDSA-----------LEGHFSNDEGTE---LVRLASRCLQSEARERPNAKSL 155
LL + ++ ++ + T + +AS+CL + +RP+ K +
Sbjct: 243 LLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 82/175 (46%), Gaps = 27/175 (15%)
Query: 1 MKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--- 57
+ W MR ++A A + + + ++ D+ + IL D+ ++S FGL + S
Sbjct: 130 LSWHMRCKIAQGAANGINFLH-ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 58 ---GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF 114
A+ PE +R G +TP+S +YSFG +LL++++G +P A+D R
Sbjct: 189 TVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG--LP---AVDEHREPQL 242
Query: 115 LLLMDSA-----------LEGHFSNDEGTE---LVRLASRCLQSEARERPNAKSL 155
LL + ++ ++ + T + +AS+CL + +RP+ K +
Sbjct: 243 LLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 82/175 (46%), Gaps = 27/175 (15%)
Query: 1 MKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--- 57
+ W MR ++A A + + + ++ D+ + IL D+ ++S FGL + S
Sbjct: 124 LSWHMRCKIAQGAANGINFLH-ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 182
Query: 58 ---GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF 114
A+ PE +R G +TP+S +YSFG +LL++++G +P A+D R
Sbjct: 183 XVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG--LP---AVDEHREPQL 236
Query: 115 LLLMDSA-----------LEGHFSNDEGTE---LVRLASRCLQSEARERPNAKSL 155
LL + ++ ++ + T + +AS+CL + +RP+ K +
Sbjct: 237 LLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 291
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 27/175 (15%)
Query: 1 MKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--- 57
+ W R ++A A + + + ++ D+ + IL D+ ++S FGL + S
Sbjct: 121 LSWHXRCKIAQGAANGINFLH-ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 179
Query: 58 ---GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF 114
A+ PE +R G +TP+S +YSFG +LL++++G +P A+D R
Sbjct: 180 XVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITG--LP---AVDEHREPQL 233
Query: 115 LLLMDSALEGHF----------SNDEGTELVR----LASRCLQSEARERPNAKSL 155
LL + +E ND + V +AS+CL + +RP+ K +
Sbjct: 234 LLDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKV 288
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 10 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 64
L +A+ +EY + + + ++ DL A + D+ +++ FGL ++ D + YS
Sbjct: 130 GLQVARGMEYLAEQ-KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHA 188
Query: 65 ---LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA 121
+ +T E ++T R T +S V+SFG +L +LL+ + PP +D +FL
Sbjct: 189 RLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT-RGAPPYRHIDPFDLTHFLAQGRRL 247
Query: 122 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 156
+ + D L ++ +C +++ RP + LV
Sbjct: 248 PQPEYCPD---SLYQVMQQCWEADPAVRPTFRVLV 279
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 33/185 (17%)
Query: 15 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 70
QALE+ S + ++ D+ + IL DG+ +L+ FG +S + + TP P
Sbjct: 128 QALEFLHS-NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAP 186
Query: 71 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 130
E + P+ ++S G M ++++ G+ PP + +R+ L L+ + N E
Sbjct: 187 EVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLRA---LYLIATNGTPELQNPE 241
Query: 131 GTELV--RLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPL- 187
+ +RCL+ + +R +AK L IQH+ KPL
Sbjct: 242 KLSAIFRDFLNRCLEMDVEKRGSAKEL--------------------IQHQFLKIAKPLS 281
Query: 188 SLTPL 192
SLTPL
Sbjct: 282 SLTPL 286
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 33/185 (17%)
Query: 15 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 70
QALE+ S + ++ D+ + IL DG+ +L+ FG +S + + TP P
Sbjct: 127 QALEFLHS-NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAP 185
Query: 71 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 130
E + P+ ++S G M ++++ G+ PP + +R+ L L+ + N E
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLRA---LYLIATNGTPELQNPE 240
Query: 131 GTELV--RLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPL- 187
+ +RCL+ + +R +AK L +QH+ KPL
Sbjct: 241 KLSAIFRDFLNRCLEMDVEKRGSAKEL--------------------LQHQFLKIAKPLS 280
Query: 188 SLTPL 192
SLTPL
Sbjct: 281 SLTPL 285
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 33/185 (17%)
Query: 15 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 70
QALE+ S + ++ ++ + IL DG+ +L+ FG +S + + TP P
Sbjct: 128 QALEFLHS-NQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 186
Query: 71 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 130
E + P+ ++S G M ++++ G+ PP + +R+ L L+ + N E
Sbjct: 187 EVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLRA---LYLIATNGTPELQNPE 241
Query: 131 GTELV--RLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPL- 187
+ +RCL+ + +R +AK L IQH+ KPL
Sbjct: 242 KLSAIFRDFLNRCLEMDVEKRGSAKEL--------------------IQHQFLKIAKPLS 281
Query: 188 SLTPL 192
SLTPL
Sbjct: 282 SLTPL 286
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 8 RVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN 64
R Y A+ L++ SKG +Y DL IL DKDG+ +++ FG+ K + G + +
Sbjct: 120 RATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNE 178
Query: 65 LAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 107
TP PE + + +SFG +L ++L G+ P H D
Sbjct: 179 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ--SPFHGQD 223
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 10 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 64
L +A+ ++Y +SK + ++ DL A + D+ +++ FGL ++ D + YS +
Sbjct: 139 GLQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 197
Query: 65 ---LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA 121
+ + E ++T + T +S V+SFG +L +L++ + PP ++ +LL
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRL 256
Query: 122 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 156
L+ + D L + +C +A RP+ LV
Sbjct: 257 LQPEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 33/185 (17%)
Query: 15 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 70
QALE+ S + ++ D+ + IL DG+ +L+ FG +S + + TP P
Sbjct: 127 QALEFLHS-NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAP 185
Query: 71 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 130
E + P+ ++S G M ++++ G+ PP + +R+ L L+ + N E
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLRA---LYLIATNGTPELQNPE 240
Query: 131 GTELV--RLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPL- 187
+ +RCL + +R +AK L +QH+ KPL
Sbjct: 241 KLSAIFRDFLNRCLDMDVEKRGSAKEL--------------------LQHQFLKIAKPLS 280
Query: 188 SLTPL 192
SLTPL
Sbjct: 281 SLTPL 285
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 33/185 (17%)
Query: 15 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 70
QALE+ S + ++ D+ + IL DG+ +L+ FG +S + + TP P
Sbjct: 127 QALEFLHS-NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 185
Query: 71 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDE 130
E + P+ ++S G M ++++ G+ PP + +R+ L L+ + N E
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLRA---LYLIATNGTPELQNPE 240
Query: 131 GTELV--RLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPL- 187
+ +RCL + +R +AK L +QH+ KPL
Sbjct: 241 KLSAIFRDFLNRCLDMDVEKRGSAKEL--------------------LQHQFLKIAKPLS 280
Query: 188 SLTPL 192
SLTPL
Sbjct: 281 SLTPL 285
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 8 RVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN 64
R Y A+ L++ SKG +Y DL IL DKDG+ +++ FG+ K + G + +
Sbjct: 119 RATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNX 177
Query: 65 LAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALD 107
TP PE + + +SFG +L ++L G+ P H D
Sbjct: 178 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ--SPFHGQD 222
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 10 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 64
L +A+ ++Y +SK + ++ DL A + D+ +++ FGL ++ D + YS +
Sbjct: 137 GLQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 195
Query: 65 ---LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA 121
+ + E ++T + T +S V+SFG +L +L++ + PP ++ +LL
Sbjct: 196 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRL 254
Query: 122 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 156
L+ + D L + +C +A RP+ LV
Sbjct: 255 LQPEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 286
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 10 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 64
L +A+ ++Y +SK + ++ DL A + D+ +++ FGL ++ D + YS +
Sbjct: 136 GLQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 194
Query: 65 ---LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA 121
+ + E ++T + T +S V+SFG +L +L++ + PP ++ +LL
Sbjct: 195 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRL 253
Query: 122 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 156
L+ + D L + +C +A RP+ LV
Sbjct: 254 LQPEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 285
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 10 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 64
L +A+ ++Y +SK + ++ DL A + D+ +++ FGL ++ D + YS +
Sbjct: 131 GLQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 189
Query: 65 ---LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA 121
+ + E ++T + T +S V+SFG +L +L++ + PP ++ +LL
Sbjct: 190 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRL 248
Query: 122 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 156
L+ + D L + +C +A RP+ LV
Sbjct: 249 LQPEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 280
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 10 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 64
L +A+ ++Y +SK + ++ DL A + D+ +++ FGL ++ D + YS +
Sbjct: 139 GLQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 197
Query: 65 ---LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA 121
+ + E ++T + T +S V+SFG +L +L++ + PP ++ +LL
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRL 256
Query: 122 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 156
L+ + D L + +C +A RP+ LV
Sbjct: 257 LQPEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 10 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 64
L +A+ ++Y +SK + ++ DL A + D+ +++ FGL ++ D + YS +
Sbjct: 138 GLQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 196
Query: 65 ---LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA 121
+ + E ++T + T +S V+SFG +L +L++ + PP ++ +LL
Sbjct: 197 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRL 255
Query: 122 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 156
L+ + D L + +C +A RP+ LV
Sbjct: 256 LQPEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 287
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 10 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 64
L +A+ ++Y +SK + ++ DL A + D+ +++ FGL ++ D + YS +
Sbjct: 157 GLQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 215
Query: 65 ---LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA 121
+ + E ++T + T +S V+SFG +L +L++ + PP ++ +LL
Sbjct: 216 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRL 274
Query: 122 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 156
L+ + D L + +C +A RP+ LV
Sbjct: 275 LQPEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 306
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 9 VALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SY 61
V YLA+ AL++ S G +Y DL IL D++G+ +L+ FGL K S D + S+
Sbjct: 129 VKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 187
Query: 62 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSG 97
+ + PE + T + +SFG ++ ++L+G
Sbjct: 188 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 10 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 64
L +A+ ++Y +SK + ++ DL A + D+ +++ FGL ++ D + YS +
Sbjct: 158 GLQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 216
Query: 65 ---LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA 121
+ + E ++T + T +S V+SFG +L +L++ + PP ++ +LL
Sbjct: 217 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRL 275
Query: 122 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 156
L+ + D L + +C +A RP+ LV
Sbjct: 276 LQPEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 307
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 9 VALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SY 61
V YLA+ AL++ S G +Y DL IL D++G+ +L+ FGL K S D + S+
Sbjct: 128 VKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 186
Query: 62 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSG 97
+ + PE + T + +SFG ++ ++L+G
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 10 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 64
L +A+ ++Y +SK + ++ DL A + D+ +++ FGL ++ D + YS +
Sbjct: 134 GLQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 192
Query: 65 ---LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA 121
+ + E ++T + T +S V+SFG +L +L++ + PP ++ +LL
Sbjct: 193 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRL 251
Query: 122 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 156
L+ + D L + +C +A RP+ LV
Sbjct: 252 LQPEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 283
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 9 VALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SY 61
V YLA+ AL++ S G +Y DL IL D++G+ +L+ FGL K S D + S+
Sbjct: 128 VKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 186
Query: 62 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSG 97
+ + PE + T + +SFG ++ ++L+G
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 79/199 (39%), Gaps = 28/199 (14%)
Query: 8 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 67
++ L +AL + + ++ D+ IL D+ GN +L FG+ D + + +
Sbjct: 129 KITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGC 188
Query: 68 TPPEYMRTGRVTP---------ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM 118
P YM R+ P S V+S G L +L +G+ P + + +
Sbjct: 189 RP--YMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYP-------KWNSVFDQL 239
Query: 119 DSALEG---HFSNDEGTE----LVRLASRCLQSEARERPNAKSLV---ISLMSLQKEAEV 168
++G SN E E + + CL + +RP K L+ LM ++ EV
Sbjct: 240 TQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEERAVEV 299
Query: 169 PSYVLLGIQHETAPSTKPL 187
YV + A + P+
Sbjct: 300 ACYVCKILDQMPATPSSPM 318
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST-NL 65
L+ +L + +A+EY ++ DL A +L +D ++S FGL K + + +
Sbjct: 105 LKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 163
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 101
+T PE +R + + +S V+SFG +L ++ S +P
Sbjct: 164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST-NL 65
L+ +L + +A+EY ++ DL A +L +D ++S FGL K + + +
Sbjct: 120 LKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 178
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 101
+T PE +R + + +S V+SFG +L ++ S +P
Sbjct: 179 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 14/150 (9%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP--- 69
+ + L+Y S+ R ++ D+ A +L + G+ +L+ FG+ D + TP
Sbjct: 125 ILKGLDYLHSE-RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWM 183
Query: 70 -PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS--ALEGHF 126
PE ++ ++ ++S G ++L G+ PP+ L +R FL+ +S LEG
Sbjct: 184 APEVIKQSAYDFKADIWSLGITAIELAKGE--PPNSDLHPMRVL-FLIPKNSPPTLEGQH 240
Query: 127 SNDEGTELVRLASRCLQSEARERPNAKSLV 156
S CL + R RP AK L+
Sbjct: 241 SK----PFKEFVEACLNKDPRFRPTAKELL 266
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST-NL 65
L+ +L + +A+EY ++ DL A +L +D ++S FGL K + + +
Sbjct: 292 LKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 350
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 101
+T PE +R + + +S V+SFG +L ++ S +P
Sbjct: 351 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST-NL 65
L+ +L + +A+EY ++ DL A +L +D ++S FGL K + + +
Sbjct: 111 LKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 169
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 101
+T PE +R + +S V+SFG +L ++ S +P
Sbjct: 170 KWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 30/168 (17%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST-----NLAF 67
+ +A+EY SK + L+ DL A L + G ++S FGL + D + S+ + +
Sbjct: 129 VCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRW 187
Query: 68 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS 127
+PPE + + + +S +++FG ++ ++ S +P + +S H +
Sbjct: 188 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP------------YERFTNSETAEHIA 235
Query: 128 NDEGTELVR--LASR--------CLQSEARERPNAKSLVISLMSLQKE 165
+G L R LAS C +A ERP K L+ +++ + E
Sbjct: 236 --QGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 6 RLRVALYL------AQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK 59
RLRV L A +EY SK ++ DL A L + ++S FG+ + DG
Sbjct: 209 RLRVKTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267
Query: 60 SYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN 113
++ + +T PE + GR + ES V+SFG +L + S P L +++
Sbjct: 268 XAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS-LGASPYPNLSNQQTRE 326
Query: 114 FLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 164
F+ D + RL +C E +RP+ ++ L S++K
Sbjct: 327 FVEKGGRLPCPELCPD---AVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 30/168 (17%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-----LAF 67
+ +A+EY SK + L+ DL A L + G ++S FGL + D + S+ + +
Sbjct: 113 VCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW 171
Query: 68 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS 127
+PPE + + + +S +++FG ++ ++ S +P + +S H +
Sbjct: 172 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP------------YERFTNSETAEHIA 219
Query: 128 NDEGTELVR--LASR--------CLQSEARERPNAKSLVISLMSLQKE 165
+G L R LAS C +A ERP K L+ +++ + E
Sbjct: 220 --QGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 265
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 30/168 (17%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-----LAF 67
+ +A+EY SK + L+ DL A L + G ++S FGL + D + S+ + +
Sbjct: 114 VCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW 172
Query: 68 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS 127
+PPE + + + +S +++FG ++ ++ S +P + +S H +
Sbjct: 173 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP------------YERFTNSETAEHIA 220
Query: 128 NDEGTELVR--LASR--------CLQSEARERPNAKSLVISLMSLQKE 165
+G L R LAS C +A ERP K L+ +++ + E
Sbjct: 221 --QGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 266
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 30/168 (17%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST-----NLAF 67
+ +A+EY SK + L+ DL A L + G ++S FGL + D + S+ + +
Sbjct: 129 VCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW 187
Query: 68 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS 127
+PPE + + + +S +++FG ++ ++ S +P + +S H +
Sbjct: 188 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP------------YERFTNSETAEHIA 235
Query: 128 NDEGTELVR--LASR--------CLQSEARERPNAKSLVISLMSLQKE 165
+G L R LAS C +A ERP K L+ +++ + E
Sbjct: 236 --QGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 24/160 (15%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL-MKNSRDGKSY---- 61
+ +A AQ ++Y +K ++ DL + I +D ++ FGL + SR S+
Sbjct: 107 IDIARQTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ 165
Query: 62 -STNLAFTPPEYMRTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLL 117
S ++ + PE +R P +S VY+FG +L +L++G+ +P S+ I +++ ++
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSN----INNRDQIIF 220
Query: 118 MDSALEGHFSNDEG-------TELVRLASRCLQSEARERP 150
M G+ S D + RL + CL+ + ERP
Sbjct: 221 MVG--RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 258
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 30/168 (17%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-----LAF 67
+ +A+EY SK + L+ DL A L + G ++S FGL + D + S+ + +
Sbjct: 109 VCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW 167
Query: 68 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS 127
+PPE + + + +S +++FG ++ ++ S +P + +S H +
Sbjct: 168 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP------------YERFTNSETAEHIA 215
Query: 128 NDEGTELVR--LASR--------CLQSEARERPNAKSLVISLMSLQKE 165
+G L R LAS C +A ERP K L+ +++ + E
Sbjct: 216 --QGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 261
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 32/169 (18%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA------ 66
+ +A+EY SK + L+ DL A L + G ++S FGL + D + Y++++
Sbjct: 120 VCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVR 177
Query: 67 FTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHF 126
++PPE + + + +S +++FG ++ ++ S +P + +S H
Sbjct: 178 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP------------YERFTNSETAEHI 225
Query: 127 SNDEGTELVR--LASR--------CLQSEARERPNAKSLVISLMSLQKE 165
+ +G L R LAS C +A ERP K L+ +++ + E
Sbjct: 226 A--QGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 272
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL-MKNSRDGKSY---- 61
+ +A A+ ++Y +K ++ DL + I +D ++ FGL + SR S+
Sbjct: 123 IDIARQTARGMDYLHAKS-IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ 181
Query: 62 -STNLAFTPPEYMRTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLL 117
S ++ + PE +R P +S VY+FG +L +L++G+ +P S+ I +++ ++
Sbjct: 182 LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ-LPYSN----INNRDQIIE 236
Query: 118 MDSALEGHFSNDEGT-------ELVRLASRCLQSEARERPNAKSLVISLMSLQKE 165
M G S D + RL + CL+ + ERP+ ++ + L +E
Sbjct: 237 M--VGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELARE 289
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 24/160 (15%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL------MKNSRDGKS 60
+ +A AQ ++Y +K ++ DL + I +D ++ FGL S +
Sbjct: 107 IDIARQTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 165
Query: 61 YSTNLAFTPPEYMRTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLL 117
S ++ + PE +R P +S VY+FG +L +L++G+ +P S+ I +++ ++
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSN----INNRDQIIF 220
Query: 118 MDSALEGHFSNDEG-------TELVRLASRCLQSEARERP 150
M G+ S D + RL + CL+ + ERP
Sbjct: 221 MVG--RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 258
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 24/158 (15%)
Query: 9 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL-MKNSRDGKSY-----S 62
+A AQ ++Y +K ++ DL + I +D ++ FGL + SR S+ S
Sbjct: 129 IARQTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS 187
Query: 63 TNLAFTPPEYMRTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD 119
++ + PE +R P +S VY+FG +L +L++G+ +P S+ I +++ ++ M
Sbjct: 188 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSN----INNRDQIIFMV 242
Query: 120 SALEGHFSNDEG-------TELVRLASRCLQSEARERP 150
G+ S D + RL + CL+ + ERP
Sbjct: 243 G--RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 278
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 30/165 (18%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-----LAF 67
+ +A+EY SK + L+ DL A L + G ++S FGL + D + S+ + +
Sbjct: 114 VCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRW 172
Query: 68 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS 127
+PPE + + + +S +++FG ++ ++ S +P + +S H +
Sbjct: 173 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP------------YERFTNSETAEHIA 220
Query: 128 NDEGTELVR--LASR--------CLQSEARERPNAKSLVISLMSL 162
+G L R LAS C +A ERP K L+ +++ +
Sbjct: 221 --QGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV 263
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 24/160 (15%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL------MKNSRDGKS 60
+ +A AQ ++Y +K ++ DL + I +D ++ FGL S +
Sbjct: 107 IDIARQTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 165
Query: 61 YSTNLAFTPPEYMRTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLL 117
S ++ + PE +R P +S VY+FG +L +L++G+ +P S+ I +++ ++
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSN----INNRDQIIF 220
Query: 118 MDSALEGHFSNDEG-------TELVRLASRCLQSEARERP 150
M G+ S D + RL + CL+ + ERP
Sbjct: 221 MVG--RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 258
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL-MKNSRDGKSY---- 61
+ +A A+ ++Y +K ++ DL + I +D ++ FGL + SR S+
Sbjct: 123 IDIARQTARGMDYLHAKS-IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ 181
Query: 62 -STNLAFTPPEYMRTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLL 117
S ++ + PE +R P +S VY+FG +L +L++G+ +P S+ I +++ ++
Sbjct: 182 LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ-LPYSN----INNRDQIIE 236
Query: 118 MDSALEGHFSNDEGT-------ELVRLASRCLQSEARERPNAKSLVISLMSLQKE 165
M G S D + RL + CL+ + ERP+ ++ + L +E
Sbjct: 237 M--VGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELARE 289
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 24/160 (15%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL------MKNSRDGKS 60
+ +A AQ ++Y +K ++ DL + I +D ++ FGL S +
Sbjct: 112 IDIARQTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 170
Query: 61 YSTNLAFTPPEYMRTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLL 117
S ++ + PE +R P +S VY+FG +L +L++G+ +P S+ I +++ ++
Sbjct: 171 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSN----INNRDQIIF 225
Query: 118 MDSALEGHFSNDEG-------TELVRLASRCLQSEARERP 150
M G+ S D + RL + CL+ + ERP
Sbjct: 226 MVG--RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 263
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 24/158 (15%)
Query: 9 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL-MKNSRDGKSY-----S 62
+A AQ ++Y +K ++ DL + I +D ++ FGL + SR S+ S
Sbjct: 137 IARQTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS 195
Query: 63 TNLAFTPPEYMRTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD 119
++ + PE +R P +S VY+FG +L +L++G+ +P S+ I +++ ++ M
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSN----INNRDQIIFMV 250
Query: 120 SALEGHFSNDEG-------TELVRLASRCLQSEARERP 150
G+ S D + RL + CL+ + ERP
Sbjct: 251 G--RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 286
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 24/160 (15%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL------MKNSRDGKS 60
+ +A AQ ++Y +K ++ DL + I +D ++ FGL S +
Sbjct: 112 IDIARQTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 170
Query: 61 YSTNLAFTPPEYMRTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLL 117
S ++ + PE +R P +S VY+FG +L +L++G+ +P S+ I +++ ++
Sbjct: 171 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSN----INNRDQIIF 225
Query: 118 MDSALEGHFSNDEG-------TELVRLASRCLQSEARERP 150
M G+ S D + RL + CL+ + ERP
Sbjct: 226 MVG--RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 263
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 6 RLRVALYL------AQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK 59
RLRV L A +EY SK ++ DL A L + ++S FG+ + DG
Sbjct: 209 RLRVKTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267
Query: 60 SYSTN------LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKN 113
++ + +T PE + GR + ES V+SFG +L + S P L +++
Sbjct: 268 YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS-LGASPYPNLSNQQTRE 326
Query: 114 FLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 164
F+ D + RL +C E +RP+ ++ L S++K
Sbjct: 327 FVEKGGRLPCPELCPD---AVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 24/158 (15%)
Query: 9 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL------MKNSRDGKSYS 62
+A AQ ++Y +K ++ DL + I +D ++ FGL S + S
Sbjct: 111 IARQTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 169
Query: 63 TNLAFTPPEYMRTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD 119
++ + PE +R P +S VY+FG +L +L++G+ +P S+ I +++ ++ M
Sbjct: 170 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSN----INNRDQIIFMV 224
Query: 120 SALEGHFSNDEG-------TELVRLASRCLQSEARERP 150
G+ S D + RL + CL+ + ERP
Sbjct: 225 G--RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 260
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 24/158 (15%)
Query: 9 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL------MKNSRDGKSYS 62
+A AQ ++Y +K ++ DL + I +D ++ FGL S + S
Sbjct: 137 IARQTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 195
Query: 63 TNLAFTPPEYMRTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD 119
++ + PE +R P +S VY+FG +L +L++G+ +P S+ I +++ ++ M
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSN----INNRDQIIFMV 250
Query: 120 SALEGHFSNDEG-------TELVRLASRCLQSEARERP 150
G+ S D + RL + CL+ + ERP
Sbjct: 251 G--RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 286
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 24/158 (15%)
Query: 9 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL------MKNSRDGKSYS 62
+A AQ ++Y +K ++ DL + I +D ++ FGL S + S
Sbjct: 136 IARQTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 194
Query: 63 TNLAFTPPEYMRTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD 119
++ + PE +R P +S VY+FG +L +L++G+ +P S+ I +++ ++ M
Sbjct: 195 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSN----INNRDQIIFMV 249
Query: 120 SALEGHFSNDEG-------TELVRLASRCLQSEARERP 150
G+ S D + RL + CL+ + ERP
Sbjct: 250 G--RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 285
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 15/156 (9%)
Query: 15 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL---------MKNSRDGKSYSTNL 65
+ LEY G+ ++ D+ A IL +DG+ +++ FG+ + ++ K++
Sbjct: 127 EGLEYLHKNGQ-IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 185
Query: 66 AFTPPEYMRTGR-VTPESVVYSFGTMLLDLLSG----KHIPPSHALDLIRSKNFLLLMDS 120
+ PE M R ++ ++SFG ++L +G PP L L + L
Sbjct: 186 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETG 245
Query: 121 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 156
+ G ++ S CLQ + +RP A L+
Sbjct: 246 VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 9 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFT 68
V L + QAL ++G ++ D+ + IL DG +LS FG L T
Sbjct: 132 VCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGT 190
Query: 69 P----PEYMRTGRVTPESVVYSFGTMLLDLLSGK----HIPPSHALDLIR 110
P PE + PE ++S G M+++++ G+ + PP A+ +IR
Sbjct: 191 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 240
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 9 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFT 68
V L + QAL ++G ++ D+ + IL DG +LS FG L T
Sbjct: 121 VCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGT 179
Query: 69 P----PEYMRTGRVTPESVVYSFGTMLLDLLSGK----HIPPSHALDLIR 110
P PE + PE ++S G M+++++ G+ + PP A+ +IR
Sbjct: 180 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 229
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 16/169 (9%)
Query: 9 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL------MKNSRDGKSYS 62
+A A+ ++Y +K ++ DL + I +D ++ FGL S + S
Sbjct: 113 IARQTARGMDYLHAKS-IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLS 171
Query: 63 TNLAFTPPEYMRTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD 119
++ + PE +R P +S VY+FG +L +L++G+ +P S+ + R + ++
Sbjct: 172 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ-LPYSNINN--RDQIIEMVGR 228
Query: 120 SALEGHFSNDEGT---ELVRLASRCLQSEARERPNAKSLVISLMSLQKE 165
+L S + RL + CL+ + ERP+ ++ + L +E
Sbjct: 229 GSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELARE 277
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 9 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFT 68
V L + QAL ++G ++ D+ + IL DG +LS FG L T
Sbjct: 130 VCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGT 188
Query: 69 P----PEYMRTGRVTPESVVYSFGTMLLDLLSGK----HIPPSHALDLIR 110
P PE + PE ++S G M+++++ G+ + PP A+ +IR
Sbjct: 189 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 238
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 15/156 (9%)
Query: 15 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL---------MKNSRDGKSYSTNL 65
+ LEY G+ ++ D+ A IL +DG+ +++ FG+ + ++ K++
Sbjct: 132 EGLEYLHKNGQ-IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 190
Query: 66 AFTPPEYMRTGR-VTPESVVYSFGTMLLDLLSG----KHIPPSHALDLIRSKNFLLLMDS 120
+ PE M R ++ ++SFG ++L +G PP L L + L
Sbjct: 191 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETG 250
Query: 121 ALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 156
+ G ++ S CLQ + +RP A L+
Sbjct: 251 VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 9 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFT 68
V L + QAL ++G ++ D+ + IL DG +LS FG L T
Sbjct: 125 VCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGT 183
Query: 69 P----PEYMRTGRVTPESVVYSFGTMLLDLLSGK----HIPPSHALDLIR 110
P PE + PE ++S G M+++++ G+ + PP A+ +IR
Sbjct: 184 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 233
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 9 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFT 68
V L + QAL ++G ++ D+ + IL DG +LS FG L T
Sbjct: 252 VCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGT 310
Query: 69 P----PEYMRTGRVTPESVVYSFGTMLLDLLSGK----HIPPSHALDLIR 110
P PE + PE ++S G M+++++ G+ + PP A+ +IR
Sbjct: 311 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 360
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 9 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFT 68
V L + QAL ++G ++ D+ + IL DG +LS FG L T
Sbjct: 175 VCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGT 233
Query: 69 P----PEYMRTGRVTPESVVYSFGTMLLDLLSGK----HIPPSHALDLIR 110
P PE + PE ++S G M+++++ G+ + PP A+ +IR
Sbjct: 234 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 283
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 18/179 (10%)
Query: 4 AMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-- 61
A L A + + + Y S+ ++ +L A +L D D ++ FGL K +G Y
Sbjct: 117 AQLLLFAQQICEGMAYLHSQ-HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 175
Query: 62 -----STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI---R 110
+ + + PE ++ + S V+SFG L +LL+ PP+ L+LI +
Sbjct: 176 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQ 235
Query: 111 SKNFLLLMDSALEGH----FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 165
+ +L + LE + E+ L C ++EA RP ++L+ L ++ ++
Sbjct: 236 GQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 294
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 10/131 (7%)
Query: 16 ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PE 71
ALEY SK +Y DL IL DK+G+ +++ FG K D + L TP PE
Sbjct: 118 ALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPD---VTYXLCGTPDYIAPE 173
Query: 72 YMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEG 131
+ T +SFG ++ ++L+G P + + +++ +L + F+ D
Sbjct: 174 VVSTKPYNKSIDWWSFGILIYEMLAG--YTPFYDSNTMKTYEKILNAELRFPPFFNEDVK 231
Query: 132 TELVRLASRCL 142
L RL +R L
Sbjct: 232 DLLSRLITRDL 242
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP--- 69
+ A++YC K R ++ DL A +L D D N +++ FG G T P
Sbjct: 120 IVSAVQYCHQK-RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAA 178
Query: 70 PEYMRTGRVT-PESVVYSFGTMLLDLLSG 97
PE + + PE V+S G +L L+SG
Sbjct: 179 PELFQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 12/142 (8%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS-RDG---KSYSTNLAFT 68
+ AL+Y S+ +Y DL ++ DKDG+ +++ FGL K +DG K++ +
Sbjct: 257 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYL 316
Query: 69 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF-LLLMDSALEGHFS 127
PE + + G ++ +++ G+ P + D K F L+LM+ E F
Sbjct: 317 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD--HEKLFELILME---EIRFP 369
Query: 128 NDEGTELVRLASRCLQSEARER 149
G E L S L+ + ++R
Sbjct: 370 RTLGPEAKSLLSGLLKKDPKQR 391
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 18/179 (10%)
Query: 4 AMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-- 61
A L A + + + Y ++ ++ +L A +L D D ++ FGL K +G Y
Sbjct: 117 AQLLLFAQQICEGMAYLHAQ-HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 175
Query: 62 -----STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI---R 110
+ + + PE ++ + S V+SFG L +LL+ PP+ L+LI +
Sbjct: 176 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQ 235
Query: 111 SKNFLLLMDSALEGH----FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 165
+ +L + LE + E+ L C ++EA RP ++L+ L ++ ++
Sbjct: 236 GQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 294
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 9 VALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGK----SY 61
V YLA+ L++ S G +Y DL IL D++G+ +L+ FGL K + D + S+
Sbjct: 132 VKFYLAELALGLDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSF 190
Query: 62 STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSG 97
+ + PE + + + +S+G ++ ++L+G
Sbjct: 191 CGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 12/142 (8%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS-RDG---KSYSTNLAFT 68
+ AL+Y S+ +Y DL ++ DKDG+ +++ FGL K +DG K++ +
Sbjct: 260 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYL 319
Query: 69 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF-LLLMDSALEGHFS 127
PE + + G ++ +++ G+ P + D K F L+LM+ E F
Sbjct: 320 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD--HEKLFELILME---EIRFP 372
Query: 128 NDEGTELVRLASRCLQSEARER 149
G E L S L+ + ++R
Sbjct: 373 RTLGPEAKSLLSGLLKKDPKQR 394
>pdb|1A17|A Chain A, Tetratricopeptide Repeats Of Protein Phosphatase 5
Length = 166
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 239 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPT---VYARRCLSYLMNDMPQEALGDAMQ 295
K + F+AKD+ AI Y+Q I+ ++P+ Y R L+YL + ALGDA +
Sbjct: 17 KTQANDYFKAKDYENAIKFYSQAIE----LNPSNAIYYGNRSLAYLRTECYGYALGDATR 72
Query: 296 AQVVSPDWPTALYLQAACLFSLG 318
A + + Y +AA +LG
Sbjct: 73 AIELDKKYIKGYYRRAASNMALG 95
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 20/186 (10%)
Query: 4 AMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-- 61
A L A + + + Y ++ ++ DL A +L D D ++ FGL K +G
Sbjct: 134 AQLLLFAQQICEGMAYLHAQ-HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYR 192
Query: 62 -----STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI---R 110
+ + + PE ++ + S V+SFG L +LL+ PP+ L+LI +
Sbjct: 193 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQ 252
Query: 111 SKNFLLLMDSALEGH----FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK-- 164
+ +L + LE + E+ L C ++EA RP ++L+ L ++ +
Sbjct: 253 GQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312
Query: 165 EAEVPS 170
+ + PS
Sbjct: 313 QGQAPS 318
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 14/158 (8%)
Query: 8 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 67
++A+ + +ALE+ SK ++ D+ +L + G ++ FG+ D + + +
Sbjct: 157 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGC 216
Query: 68 TPPEYMRTGRVTPE---------SVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM 118
P YM R+ PE S ++S G +++L + S + K +
Sbjct: 217 KP--YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP 274
Query: 119 DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 156
L ++ E V S+CL+ ++ERP L+
Sbjct: 275 SPQLP---ADKFSAEFVDFTSQCLKKNSKERPTYPELM 309
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 12/142 (8%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS-RDG---KSYSTNLAFT 68
+ AL+Y S+ +Y DL ++ DKDG+ +++ FGL K +DG K + +
Sbjct: 118 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYL 177
Query: 69 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF-LLLMDSALEGHFS 127
PE + + G ++ +++ G+ P + D K F L+LM+ E F
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD--HEKLFELILME---EIRFP 230
Query: 128 NDEGTELVRLASRCLQSEARER 149
G E L S L+ + ++R
Sbjct: 231 RTLGPEAKSLLSGLLKKDPKQR 252
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 12/142 (8%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS-RDG---KSYSTNLAFT 68
+ AL+Y S+ +Y DL ++ DKDG+ +++ FGL K +DG K + +
Sbjct: 119 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYL 178
Query: 69 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF-LLLMDSALEGHFS 127
PE + + G ++ +++ G+ P + D K F L+LM+ E F
Sbjct: 179 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD--HEKLFELILME---EIRFP 231
Query: 128 NDEGTELVRLASRCLQSEARER 149
G E L S L+ + ++R
Sbjct: 232 RTLGPEAKSLLSGLLKKDPKQR 253
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 12/142 (8%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS-RDG---KSYSTNLAFT 68
+ AL+Y S+ +Y DL ++ DKDG+ +++ FGL K +DG K + +
Sbjct: 117 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYL 176
Query: 69 PPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNF-LLLMDSALEGHFS 127
PE + + G ++ +++ G+ P + D K F L+LM+ E F
Sbjct: 177 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD--HEKLFELILME---EIRFP 229
Query: 128 NDEGTELVRLASRCLQSEARER 149
G E L S L+ + ++R
Sbjct: 230 RTLGPEAKSLLSGLLKKDPKQR 251
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 69/147 (46%), Gaps = 18/147 (12%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYSTNL 65
+A+ + + + ++ DL A IL +++ FGL + +R+G + +
Sbjct: 120 IAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFP--I 176
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHA-LDLIRSKNFLLLMDSALE 123
+T PE + G T +S V+SFG +L+++++ IP P + ++IR+ ++
Sbjct: 177 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA------LERGYR 230
Query: 124 GHFSNDEGTELVRLASRCLQSEARERP 150
+ EL + RC ++ ERP
Sbjct: 231 MPRPENCPEELYNIMMRCWKNRPEERP 257
>pdb|1WAO|1 Chain 1, Pp5 Structure
pdb|1WAO|2 Chain 2, Pp5 Structure
pdb|1WAO|3 Chain 3, Pp5 Structure
pdb|1WAO|4 Chain 4, Pp5 Structure
Length = 477
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 239 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPT---VYARRCLSYLMNDMPQEALGDAMQ 295
K + F+AKD+ AI Y+Q I+ ++P+ Y R L+YL + ALGDA +
Sbjct: 10 KTQANDYFKAKDYENAIKFYSQAIE----LNPSNAIYYGNRSLAYLRTECYGYALGDATR 65
Query: 296 AQVVSPDWPTALYLQAACLFSLG 318
A + + Y +AA +LG
Sbjct: 66 AIELDKKYIKGYYRRAASNMALG 88
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTP 69
+ A++YC K R ++ DL A +L D D N +++ FG G ++ +
Sbjct: 123 IVSAVQYCHQK-RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAA 181
Query: 70 PEYMRTGRVT-PESVVYSFGTMLLDLLSG 97
PE + + PE V+S G +L L+SG
Sbjct: 182 PELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 66/158 (41%), Gaps = 14/158 (8%)
Query: 8 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 67
++A+ + +ALE+ SK ++ D+ +L + G ++ FG+ D + +
Sbjct: 113 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGC 172
Query: 68 TPPEYMRTGRVTPE---------SVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM 118
P YM R+ PE S ++S G +++L + S + K +
Sbjct: 173 KP--YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP 230
Query: 119 DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLV 156
L ++ E V S+CL+ ++ERP L+
Sbjct: 231 SPQLP---ADKFSAEFVDFTSQCLKKNSKERPTYPELM 265
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 17/161 (10%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFD-KDGNPRLSSFG--LMKNSRDGKSYSTNLAFTP 69
+ A+++C S+G ++ D+ IL D + G +L FG + + + ++P
Sbjct: 148 VVAAIQHCHSRG-VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSP 206
Query: 70 PEYM-RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSN 128
PE++ R + V+S G +L D++ G IP +++ + E HF
Sbjct: 207 PEWISRHQYHALPATVWSLGILLYDMVCGD-IPFERDQEILEA-----------ELHFPA 254
Query: 129 DEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVP 169
+ L RCL + RP+ + +++ +VP
Sbjct: 255 HVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAEDVP 295
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGK 59
L +A +A+ + + + ++ DL A IL + +++ FGL + +R+G
Sbjct: 112 LDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGA 170
Query: 60 SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 101
+ + +T PE + G T +S V+SFG +L ++++ IP
Sbjct: 171 KFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGK 59
L +A +A+ + + + ++ DL A IL + +++ FGL + +R+G
Sbjct: 112 LDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 170
Query: 60 SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 101
+ + +T PE + G T +S V+SFG +L ++++ IP
Sbjct: 171 KFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGK 59
L +A +A+ + + + ++ DL A IL + +++ FGL + +R+G
Sbjct: 120 LDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 178
Query: 60 SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 101
+ + +T PE + G T +S V+SFG +L ++++ IP
Sbjct: 179 KFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 218
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGK 59
L +A +A+ + + + ++ DL A IL + +++ FGL + +R+G
Sbjct: 113 LDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 171
Query: 60 SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 101
+ + +T PE + G T +S V+SFG +L ++++ IP
Sbjct: 172 KFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 211
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGK 59
L +A +A+ + + + ++ DL A IL + +++ FGL + +R+G
Sbjct: 118 LDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 176
Query: 60 SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 101
+ + +T PE + G T +S V+SFG +L ++++ IP
Sbjct: 177 KFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGK 59
L +A +A+ + + + ++ DL A IL + +++ FGL + +R+G
Sbjct: 114 LDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 172
Query: 60 SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 101
+ + +T PE + G T +S V+SFG +L ++++ IP
Sbjct: 173 KFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 212
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGK 59
L +A +A+ + + + ++ DL A IL + +++ FGL + +R+G
Sbjct: 118 LDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 176
Query: 60 SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 101
+ + +T PE + G T +S V+SFG +L ++++ IP
Sbjct: 177 KFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGK 59
L +A +A+ + + + ++ DL A IL + +++ FGL + +R+G
Sbjct: 117 LDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 175
Query: 60 SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 101
+ + +T PE + G T +S V+SFG +L ++++ IP
Sbjct: 176 KFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 215
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGK 59
L +A +A+ + + + ++ DL A IL + +++ FGL + +R+G
Sbjct: 112 LDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 170
Query: 60 SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 101
+ + +T PE + G T +S V+SFG +L ++++ IP
Sbjct: 171 KFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGK 59
L +A +A+ + + + ++ DL A IL + +++ FGL + +R+G
Sbjct: 121 LDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 179
Query: 60 SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 101
+ + +T PE + G T +S V+SFG +L ++++ IP
Sbjct: 180 KFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 219
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGK 59
L +A +A+ + + + ++ DL A IL + +++ FGL + +R+G
Sbjct: 112 LDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 170
Query: 60 SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 101
+ + +T PE + G T +S V+SFG +L ++++ IP
Sbjct: 171 KFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 65/147 (44%), Gaps = 16/147 (10%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYSTNL 65
+A+ + Y K ++ DL A +L + +++ FGL + +R+G + +
Sbjct: 119 IAEGMAYIERKNY-IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP--I 175
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNFLLLMDSALEG 124
+T PE + G T +S V+SFG +L ++++ IP P + + + +
Sbjct: 176 KWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRT-----NADVMTALSQGYRM 230
Query: 125 HFSNDEGTELVRLASRCLQSEARERPN 151
+ EL + C + +A ERP
Sbjct: 231 PRVENCPDELYDIMKMCWKEKAEERPT 257
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVT 79
++ DL A IL +++ FGL + +R+G + + +T PE + G T
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGSFT 363
Query: 80 PESVVYSFGTMLLDLLSGKHIP-PSHA-LDLIRSKNFLLLMDSALEGHFSNDEGTELVRL 137
+S V+SFG +L+++++ IP P + ++IR+ ++ + EL +
Sbjct: 364 IKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA------LERGYRMPRPENCPEELYNI 417
Query: 138 ASRCLQSEARERPN 151
RC ++ ERP
Sbjct: 418 MMRCWKNRPEERPT 431
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGK 59
L +A +A+ + + + ++ DL A IL + +++ FGL + +R+G
Sbjct: 122 LDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 180
Query: 60 SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 101
+ + +T PE + G T +S V+SFG +L ++++ IP
Sbjct: 181 KFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 220
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGK 59
L +A +A+ + + + ++ DL A IL + +++ FGL + +R+G
Sbjct: 107 LDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 165
Query: 60 SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 101
+ + +T PE + G T +S V+SFG +L ++++ IP
Sbjct: 166 KFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 205
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 9/110 (8%)
Query: 9 VALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFT 68
V L + +AL Y ++G ++ D+ + IL DG +LS FG L T
Sbjct: 146 VCLSVLRALSYLHNQG-VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGT 204
Query: 69 P----PEYMRTGRVTPESVVYSFGTMLLDLLSGK----HIPPSHALDLIR 110
P PE + E ++S G M+++++ G+ + PP A+ IR
Sbjct: 205 PYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIR 254
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 13/127 (10%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYMRTGRVTPESVVYS 86
++ DL A IL +++ FGL +R G + + +T PE + G T +S V+S
Sbjct: 300 IHRDLRAANILVSASLVCKIADFGL---ARVGAKFP--IKWTAPEAINFGSFTIKSDVWS 354
Query: 87 FGTMLLDLLSGKHIP-PSHA-LDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQS 144
FG +L+++++ IP P + ++IR+ ++ + EL + RC ++
Sbjct: 355 FGILLMEIVTYGRIPYPGMSNPEVIRA------LERGYRMPRPENCPEELYNIMMRCWKN 408
Query: 145 EARERPN 151
ERP
Sbjct: 409 RPEERPT 415
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 6 RLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN 64
RL +A +A+ + Y ++ + H DL + +L DK ++ FGL + S
Sbjct: 139 RLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKX 198
Query: 65 LAFTP----PEYMRTGRVTPESVVYSFGTMLLDL 94
A TP PE +R +S VYSFG +L +L
Sbjct: 199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 12/151 (7%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN-----L 65
+A ++Y S G A++ DL A IL + + ++S FGL + D +Y+T +
Sbjct: 156 IASGMKYLSDMG-AVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH 125
+T PE + + T S V+S+G +L +++S P + +++ + +D
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDEGYRLP 270
Query: 126 FSNDEGTELVRLASRCLQSEARERPNAKSLV 156
D L +L C Q + RP + +V
Sbjct: 271 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 15 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----P 70
QAL Y ++G ++ D+ + IL DG +LS FG L TP P
Sbjct: 152 QALAYLHAQG-VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAP 210
Query: 71 EYMRTGRVTPESVVYSFGTMLLDLLSGKHIPP 102
E + E ++S G M+++++ G+ PP
Sbjct: 211 EVISRSLYATEVDIWSLGIMVIEMVDGE--PP 240
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 25 RALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTPPEYMRTGRVTPE 81
R +Y DL IL D G+ R+S GL + +G K + + PE ++ R T
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFS 365
Query: 82 SVVYSFGTMLLDLLSGK 98
++ G +L ++++G+
Sbjct: 366 PDWWALGCLLYEMIAGQ 382
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP--- 69
+ A++YC K ++ DL A +L D D N +++ FG G T P
Sbjct: 115 IVSAVQYCHQKF-IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAA 173
Query: 70 PEYMRTGRVT-PESVVYSFGTMLLDLLSG 97
PE + + PE V+S G +L L+SG
Sbjct: 174 PELFQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 13/136 (9%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVT 79
++ DL A IL ++ +++ FGL + +R G + + +T PE GR T
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFP--IKWTAPEAALYGRFT 190
Query: 80 PESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLAS 139
+S V+SFG +L +L + +P ++ + L ++ + L L
Sbjct: 191 IKSDVWSFGILLTELTTKGRVPYPGMVN----REVLDQVERGYRMPCPPECPESLHDLMC 246
Query: 140 RCLQSEARERPNAKSL 155
+C + E ERP + L
Sbjct: 247 QCWRKEPEERPTFEYL 262
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 75/171 (43%), Gaps = 11/171 (6%)
Query: 1 MKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDK-DGN----PRLSSFGLMKN 54
+KW+++LR+ L +A +EY ++ + H DL + I D N +++ FGL +
Sbjct: 119 IKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ 178
Query: 55 SRDGKS-YSTNLAFTPPEYM--RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS 111
S S N + PE + T ++ YSF +L +L+G+ ++ I+
Sbjct: 179 SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF 238
Query: 112 KNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 162
N ++ + L D L + C + ++RP+ +V L L
Sbjct: 239 IN--MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 13/136 (9%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVT 79
++ DL A IL ++ +++ FGL + +R G + + +T PE GR T
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP--IKWTAPEAALYGRFT 183
Query: 80 PESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLAS 139
+S V+SFG +L +L + +P ++ + L ++ + L L
Sbjct: 184 IKSDVWSFGILLTELTTKGRVPYPGMVN----REVLDQVERGYRMPCPPECPESLHDLMC 239
Query: 140 RCLQSEARERPNAKSL 155
+C + E ERP + L
Sbjct: 240 QCWRKEPEERPTFEYL 255
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 72/165 (43%), Gaps = 19/165 (11%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------STNL 65
+ + +EY +K R ++ DL IL + + ++ FGL K K + + +
Sbjct: 123 ICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI 181
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLMDSA 121
+ PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 241
Query: 122 LE-----GHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISL 159
+E G +G E+ + + C + +RP+ + L + +
Sbjct: 242 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 286
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 65/147 (44%), Gaps = 16/147 (10%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYSTNL 65
+A+ + Y K ++ DL A +L + +++ FGL + +R+G + +
Sbjct: 118 IAEGMAYIERKNY-IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP--I 174
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNFLLLMDSALEG 124
+T PE + G T +S V+SFG +L ++++ IP P + + + +
Sbjct: 175 KWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRT-----NADVMSALSQGYRM 229
Query: 125 HFSNDEGTELVRLASRCLQSEARERPN 151
+ EL + C + +A ERP
Sbjct: 230 PRMENCPDELYDIMKMCWKEKAEERPT 256
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 25 RALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG---KSYSTNLAFTPPEYMRTGRVTPE 81
R +Y DL IL D G+ R+S GL + +G K + + PE ++ R T
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFS 365
Query: 82 SVVYSFGTMLLDLLSGK 98
++ G +L ++++G+
Sbjct: 366 PDWWALGCLLYEMIAGQ 382
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP--- 69
+ A++YC K ++ DL A +L D D N +++ FG G T P
Sbjct: 122 IVSAVQYCHQKF-IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAA 180
Query: 70 PEYMRTGRVT-PESVVYSFGTMLLDLLSG 97
PE + + PE V+S G +L L+SG
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 13/136 (9%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVT 79
++ DL A IL ++ +++ FGL + +R G + + +T PE GR T
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 190
Query: 80 PESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLAS 139
+S V+SFG +L +L + +P ++ + L ++ + L L
Sbjct: 191 IKSDVWSFGILLTELTTKGRVPYPGMVN----REVLDQVERGYRMPCPPECPESLHDLMC 246
Query: 140 RCLQSEARERPNAKSL 155
+C + E ERP + L
Sbjct: 247 QCWRKEPEERPTFEYL 262
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 13/136 (9%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVT 79
++ DL A IL ++ +++ FGL + +R G + + +T PE GR T
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 186
Query: 80 PESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLAS 139
+S V+SFG +L +L + +P ++ + L ++ + L L
Sbjct: 187 IKSDVWSFGILLTELTTKGRVPYPGMVN----REVLDQVERGYRMPCPPECPESLHDLMC 242
Query: 140 RCLQSEARERPNAKSL 155
+C + E ERP + L
Sbjct: 243 QCWRKEPEERPTFEYL 258
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP--- 69
+ A++YC K ++ DL A +L D D N +++ FG G T P
Sbjct: 122 IVSAVQYCHQKF-IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAA 180
Query: 70 PEYMRTGRVT-PESVVYSFGTMLLDLLSG 97
PE + + PE V+S G +L L+SG
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2BUG|A Chain A, Solution Structure Of The Tpr Domain From Protein
Phosphatase 5 In Complex With Hsp90 Derived Peptide
Length = 140
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 239 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPT---VYARRCLSYLMNDMPQEALGDAMQ 295
K + F+AKD+ AI Y+Q I+ ++P+ Y R L+YL + AL DA +
Sbjct: 25 KTQANDYFKAKDYENAIKFYSQAIE----LNPSNAIYYGNRSLAYLRTECYGYALNDATR 80
Query: 296 AQVVSPDWPTALYLQAACLFSLG 318
A + + Y +AA +LG
Sbjct: 81 AIELDKKYIKGYYRRAASNMALG 103
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP--- 69
+ A++YC K ++ DL A +L D D N +++ FG G T P
Sbjct: 122 IVSAVQYCHQKF-IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAA 180
Query: 70 PEYMRTGRVT-PESVVYSFGTMLLDLLSG 97
PE + + PE V+S G +L L+SG
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3SZ7|A Chain A, Crystal Structure Of The Sgt2 Tpr Domain From Aspergillus
Fumigatus
Length = 164
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Query: 239 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQV 298
K G+ A K++S AID YTQ + +P + R +Y + ++A DA A V
Sbjct: 15 KSEGNAAMARKEYSKAIDLYTQALSIAP-ANPIYLSNRAAAYSASGQHEKAAEDAELATV 73
Query: 299 VSPDWPTALYLQAACLFSLGMENDARETLKDGTNLE 334
V P + A F + A+E + G E
Sbjct: 74 VDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAE 109
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 24/180 (13%)
Query: 3 WAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL----------- 51
W+ R+ A +A + Y S ++ DLN++ L ++ N ++ FGL
Sbjct: 107 WSQRVSFAKDIASGMAYLHSMN-IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165
Query: 52 -----MKNSRDGKSYST--NLAFTPPEYMRTGRVTPESV-VYSFGTMLLDLLSGKHIPPS 103
+K K Y+ N + PE M GR E V V+SFG +L +++ + P
Sbjct: 166 EGLRSLKKPDRKKRYTVVGNPYWMAPE-MINGRSYDEKVDVFSFGIVLCEIIGRVNADPD 224
Query: 104 HALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQ 163
+ L R+ +F L + L+ + + + RC + +RP+ L L +L+
Sbjct: 225 Y---LPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVT 79
++ DL A IL ++ +++ FGL + +R G + + +T PE GR T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 193
Query: 80 PESVVYSFGTMLLDLLSGKHIP 101
+S V+SFG +L +L + +P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVT 79
++ DL A IL ++ +++ FGL + +R G + + +T PE GR T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP--IKWTAPEAALYGRFT 193
Query: 80 PESVVYSFGTMLLDLLSGKHIP 101
+S V+SFG +L +L + +P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVT 79
++ DL A IL ++ +++ FGL + +R G + + +T PE GR T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 193
Query: 80 PESVVYSFGTMLLDLLSGKHIP 101
+S V+SFG +L +L + +P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 16/155 (10%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--------- 57
L VA +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 143 LHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 201
Query: 58 GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNFLL 116
G + + PPE G T ++ +SFG +L ++ S ++P PS + ++ L
Sbjct: 202 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEVLE 256
Query: 117 LMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 151
+ S + + R+ ++C Q + +RPN
Sbjct: 257 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 291
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 72/165 (43%), Gaps = 19/165 (11%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------STNL 65
+ + +EY +K R ++ +L IL + + ++ FGL K K Y + +
Sbjct: 124 ICKGMEYLGTK-RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPI 182
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLMDSA 121
+ PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 183 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 242
Query: 122 LE-----GHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISL 159
+E G +G E+ + + C + +RP+ + L + +
Sbjct: 243 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 287
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 16/155 (10%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--------- 57
L VA +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 135 LHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 193
Query: 58 GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNFLL 116
G + + PPE G T ++ +SFG +L ++ S ++P PS + ++ L
Sbjct: 194 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEVLE 248
Query: 117 LMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 151
+ S + + R+ ++C Q + +RPN
Sbjct: 249 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 283
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 15/137 (10%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVT 79
++ DL + IL +++ FGL + +R G + + +T PE GR T
Sbjct: 127 IHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFP--IKWTAPEAALYGRFT 184
Query: 80 PESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLA 138
+S V+SFG +L +L++ +P P + ++ L ++ D L L
Sbjct: 185 IKSDVWSFGILLTELVTKGRVPYPG-----MNNREVLEQVERGYRMPCPQDCPISLHELM 239
Query: 139 SRCLQSEARERPNAKSL 155
C + + ERP + L
Sbjct: 240 IHCWKKDPEERPTFEYL 256
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 16/155 (10%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--------- 57
L VA +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 158 LHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 216
Query: 58 GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNFLL 116
G + + PPE G T ++ +SFG +L ++ S ++P PS + ++ L
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEVLE 271
Query: 117 LMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 151
+ S + + R+ ++C Q + +RPN
Sbjct: 272 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 306
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVT 79
++ DL A IL ++ +++ FGL + +R G + + +T PE GR T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 193
Query: 80 PESVVYSFGTMLLDLLSGKHIP 101
+S V+SFG +L +L + +P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 16/155 (10%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--------- 57
L VA +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 143 LHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 201
Query: 58 GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNFLL 116
G + + PPE G T ++ +SFG +L ++ S ++P PS + ++ L
Sbjct: 202 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEVLE 256
Query: 117 LMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 151
+ S + + R+ ++C Q + +RPN
Sbjct: 257 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 291
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 16/155 (10%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--------- 57
L VA +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 158 LHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 216
Query: 58 GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNFLL 116
G + + PPE G T ++ +SFG +L ++ S ++P PS + ++ L
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEVLE 271
Query: 117 LMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 151
+ S + + R+ ++C Q + +RPN
Sbjct: 272 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 306
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVT 79
++ DL A IL ++ +++ FGL + +R G + + +T PE GR T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 193
Query: 80 PESVVYSFGTMLLDLLSGKHIP 101
+S V+SFG +L +L + +P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVT 79
++ DL A IL ++ +++ FGL + +R G + + +T PE GR T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 193
Query: 80 PESVVYSFGTMLLDLLSGKHIP 101
+S V+SFG +L +L + +P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVT 79
++ DL A IL ++ +++ FGL + +R G + + +T PE GR T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 193
Query: 80 PESVVYSFGTMLLDLLSGKHIP 101
+S V+SFG +L +L + +P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 16/155 (10%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--------- 57
L VA +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 144 LHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 202
Query: 58 GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNFLL 116
G + + PPE G T ++ +SFG +L ++ S ++P PS + ++ L
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEVLE 257
Query: 117 LMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 151
+ S + + R+ ++C Q + +RPN
Sbjct: 258 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 292
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVT 79
++ DL A IL ++ +++ FGL + +R G + + +T PE GR T
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 182
Query: 80 PESVVYSFGTMLLDLLSGKHIP 101
+S V+SFG +L +L + +P
Sbjct: 183 IKSDVWSFGILLTELTTKGRVP 204
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 11 LYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS-RDG---KSYST 63
YLA+ AL + KG +Y DL I+ + G+ +L+ FGL K S DG ++
Sbjct: 125 FYLAEISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCG 183
Query: 64 NLAFTPPEY-MRTGRVTPESVVYSFGTMLLDLLSGKHIPP 102
+ + PE MR+G +S G ++ D+L+G PP
Sbjct: 184 TIEYMAPEILMRSGHNRAVD-WWSLGALMYDMLTGA--PP 220
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVT 79
++ DL A IL ++ +++ FGL + +R G + + +T PE GR T
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 359
Query: 80 PESVVYSFGTMLLDLLSGKHIP 101
+S V+SFG +L +L + +P
Sbjct: 360 IKSDVWSFGILLTELTTKGRVP 381
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVT 79
++ DL A IL ++ +++ FGL + +R G + + +T PE GR T
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 359
Query: 80 PESVVYSFGTMLLDLLSGKHIP 101
+S V+SFG +L +L + +P
Sbjct: 360 IKSDVWSFGILLTELTTKGRVP 381
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVT 79
++ DL A IL ++ +++ FGL + +R G + + +T PE GR T
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 184
Query: 80 PESVVYSFGTMLLDLLSGKHIP 101
+S V+SFG +L +L + +P
Sbjct: 185 IKSDVWSFGILLTELTTKGRVP 206
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 16/155 (10%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--------- 57
L VA +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 144 LHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 202
Query: 58 GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNFLL 116
G + + PPE G T ++ +SFG +L ++ S ++P PS + ++ L
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEVLE 257
Query: 117 LMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 151
+ S + + R+ ++C Q + +RPN
Sbjct: 258 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 292
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 16/155 (10%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--------- 57
L VA +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 161 LHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRK 219
Query: 58 GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNFLL 116
G + + PPE G T ++ +SFG +L ++ S ++P PS + ++ L
Sbjct: 220 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEVLE 274
Query: 117 LMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 151
+ S + + R+ ++C Q + +RPN
Sbjct: 275 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 309
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 16/155 (10%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--------- 57
L VA +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 160 LHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 218
Query: 58 GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNFLL 116
G + + PPE G T ++ +SFG +L ++ S ++P PS + ++ L
Sbjct: 219 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEVLE 273
Query: 117 LMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 151
+ S + + R+ ++C Q + +RPN
Sbjct: 274 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 308
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 63/156 (40%), Gaps = 20/156 (12%)
Query: 26 ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST--NLAFTPPEYMRTGRVTPESV 83
+Y DL IL D+ G+ R+S GL + K +++ + PE ++ G S
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 372
Query: 84 -VYSFGTMLLDLLSGKHIP-------PSHALDLIRSKNFLLLMD-------SALEGHFSN 128
+S G ML LL G H P H +D + + L D S LEG
Sbjct: 373 DWFSLGCMLFKLLRG-HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR 431
Query: 129 DEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 164
D L L E +E P +SL ++ LQK
Sbjct: 432 DVNRRLGCLGRGA--QEVKESPFFRSLDWQMVFLQK 465
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 63/156 (40%), Gaps = 20/156 (12%)
Query: 26 ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST--NLAFTPPEYMRTGRVTPESV 83
+Y DL IL D+ G+ R+S GL + K +++ + PE ++ G S
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 372
Query: 84 -VYSFGTMLLDLLSGKHIP-------PSHALDLIRSKNFLLLMD-------SALEGHFSN 128
+S G ML LL G H P H +D + + L D S LEG
Sbjct: 373 DWFSLGCMLFKLLRG-HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR 431
Query: 129 DEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 164
D L L E +E P +SL ++ LQK
Sbjct: 432 DVNRRLGCLGRGA--QEVKESPFFRSLDWQMVFLQK 465
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVT 79
++ DL A IL ++ +++ FGL + +R G + + +T PE GR T
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 359
Query: 80 PESVVYSFGTMLLDLLSGKHIP 101
+S V+SFG +L +L + +P
Sbjct: 360 IKSDVWSFGILLTELTTKGRVP 381
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 16/155 (10%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--------- 57
L VA +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 184 LHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRK 242
Query: 58 GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNFLL 116
G + + PPE G T ++ +SFG +L ++ S ++P PS + ++ L
Sbjct: 243 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEVLE 297
Query: 117 LMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 151
+ S + + R+ ++C Q + +RPN
Sbjct: 298 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 332
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 16/155 (10%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--------- 57
L VA +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 158 LHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 216
Query: 58 GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNFLL 116
G + + PPE G T ++ +SFG +L ++ S ++P PS + ++ L
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEVLE 271
Query: 117 LMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 151
+ S + + R+ ++C Q + +RPN
Sbjct: 272 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 306
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 13/100 (13%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA---FTP 69
+ A++YC + ++ DL +L D N +++ FGL DG+ T+ +
Sbjct: 120 ILSAVDYCH-RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAA 178
Query: 70 PEYMRTGRV--TPESVVYSFGTMLLDLLSG------KHIP 101
PE + +GR+ PE ++S G +L LL G +H+P
Sbjct: 179 PEVI-SGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP 217
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 63/156 (40%), Gaps = 20/156 (12%)
Query: 26 ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST--NLAFTPPEYMRTGRVTPESV 83
+Y DL IL D+ G+ R+S GL + K +++ + PE ++ G S
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 372
Query: 84 -VYSFGTMLLDLLSGKHIP-------PSHALDLIRSKNFLLLMD-------SALEGHFSN 128
+S G ML LL G H P H +D + + L D S LEG
Sbjct: 373 DWFSLGCMLFKLLRG-HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR 431
Query: 129 DEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 164
D L L E +E P +SL ++ LQK
Sbjct: 432 DVNRRLGCLGRGA--QEVKESPFFRSLDWQMVFLQK 465
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 16/155 (10%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--------- 57
L VA +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 150 LHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 208
Query: 58 GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNFLL 116
G + + PPE G T ++ +SFG +L ++ S ++P PS + ++ L
Sbjct: 209 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEVLE 263
Query: 117 LMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 151
+ S + + R+ ++C Q + +RPN
Sbjct: 264 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 298
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGK 59
L +A +A+ + + + ++ +L A IL + +++ FGL + +R+G
Sbjct: 108 LDMAAQIAEGMAFIEERN-YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 166
Query: 60 SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 101
+ + +T PE + G T +S V+SFG +L ++++ IP
Sbjct: 167 KFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 206
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 63/156 (40%), Gaps = 20/156 (12%)
Query: 26 ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST--NLAFTPPEYMRTGRVTPESV 83
+Y DL IL D+ G+ R+S GL + K +++ + PE ++ G S
Sbjct: 312 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 371
Query: 84 -VYSFGTMLLDLLSGKHIP-------PSHALDLIRSKNFLLLMD-------SALEGHFSN 128
+S G ML LL G H P H +D + + L D S LEG
Sbjct: 372 DWFSLGCMLFKLLRG-HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR 430
Query: 129 DEGTELVRLASRCLQSEARERPNAKSLVISLMSLQK 164
D L L E +E P +SL ++ LQK
Sbjct: 431 DVNRRLGCLGRGA--QEVKESPFFRSLDWQMVFLQK 464
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 17/158 (10%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------STNLAFTPPEYMRTGRVT 79
++ L A +L D D ++ FGL K +G Y + + + PE ++ +
Sbjct: 133 IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFY 192
Query: 80 PESVVYSFGTMLLDLLS---GKHIPPSHALDLI---RSKNFLLLMDSALEGH----FSND 129
S V+SFG L +LL+ P + +LI + + +L + LE +
Sbjct: 193 YASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDR 252
Query: 130 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAE 167
E+ L C ++EA RP ++LV L + Q++ +
Sbjct: 253 CPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQEKYQ 290
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 17/158 (10%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------STNLAFTPPEYMRTGRVT 79
++ L A +L D D ++ FGL K +G Y + + + PE ++ +
Sbjct: 134 IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFY 193
Query: 80 PESVVYSFGTMLLDLLS---GKHIPPSHALDLI---RSKNFLLLMDSALEGH----FSND 129
S V+SFG L +LL+ P + +LI + + +L + LE +
Sbjct: 194 YASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDR 253
Query: 130 EGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAE 167
E+ L C ++EA RP ++LV L + Q++ +
Sbjct: 254 CPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQEKYQ 291
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVT 79
++ DL A IL ++ +++ FGL + +R G + + +T PE GR T
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 193
Query: 80 PESVVYSFGTMLLDLLSGKHIP 101
+S V+SFG +L +L + +P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 17/105 (16%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA 66
L + L +A+A+E+ SKG ++ DL I F D ++ FGL+ + T L
Sbjct: 121 LHIFLQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 67 FTPPEYMRTGRV------TPESV----------VYSFGTMLLDLL 95
P TG+V +PE + ++S G +L +LL
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 12/157 (7%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN------LA 66
+A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ Y L
Sbjct: 159 VAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 217
Query: 67 FTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGH 125
+ PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 218 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGTRMR 273
Query: 126 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 162
+ E+ + C E +RP LV L +L
Sbjct: 274 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 310
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 12/157 (7%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN------LA 66
+A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ Y L
Sbjct: 157 VAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 215
Query: 67 FTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGH 125
+ PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGTRMR 271
Query: 126 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 162
+ E+ + C E +RP LV L +L
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 16/155 (10%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD--------- 57
L VA +A +Y + ++ D+ A L G R++ G +RD
Sbjct: 170 LHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 228
Query: 58 GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNFLL 116
G + + PPE G T ++ +SFG +L ++ S ++P PS + ++ L
Sbjct: 229 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEVLE 283
Query: 117 LMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 151
+ S + + R+ ++C Q + +RPN
Sbjct: 284 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 318
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 12/160 (7%)
Query: 10 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 64
+ +A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ Y
Sbjct: 206 SFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 65 -LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSAL 122
L + PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 265 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGT 320
Query: 123 EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 162
+ E+ + C E +RP LV L +L
Sbjct: 321 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 360
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 12/157 (7%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN------LA 66
+A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ Y L
Sbjct: 148 VAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 206
Query: 67 FTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGH 125
+ PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGTRMR 262
Query: 126 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 162
+ E+ + C E +RP LV L +L
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 12/160 (7%)
Query: 10 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 64
+ +A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ Y
Sbjct: 204 SFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 65 -LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSAL 122
L + PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 263 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGT 318
Query: 123 EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 162
+ E+ + C E +RP LV L +L
Sbjct: 319 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 358
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 12/157 (7%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN------LA 66
+A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ Y L
Sbjct: 148 VAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 206
Query: 67 FTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGH 125
+ PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGTRMR 262
Query: 126 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 162
+ E+ + C E +RP LV L +L
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 12/160 (7%)
Query: 10 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 64
+ +A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ Y
Sbjct: 199 SFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 65 -LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSAL 122
L + PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGT 313
Query: 123 EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 162
+ E+ + C E +RP LV L +L
Sbjct: 314 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 353
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 12/157 (7%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN------LA 66
+A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ Y L
Sbjct: 194 VAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 252
Query: 67 FTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGH 125
+ PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 253 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGTRMR 308
Query: 126 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 162
+ E+ + C E +RP LV L +L
Sbjct: 309 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 12/160 (7%)
Query: 10 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN----- 64
+ +A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ Y
Sbjct: 197 SFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 65 -LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSAL 122
L + PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 256 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGT 311
Query: 123 EGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 162
+ E+ + C E +RP LV L +L
Sbjct: 312 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 351
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 17/140 (12%)
Query: 25 RALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTP 80
+ L+ D+ + I KDG +L FG+ + + TP PE
Sbjct: 145 KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNN 204
Query: 81 ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSA----LEGHFSNDEGTELVR 136
+S +++ G +L +L + K HA + KN +L + S + H+S D L
Sbjct: 205 KSDIWALGCVLYELCTLK-----HAFEAGSMKNLVLKIISGSFPPVSLHYSYD----LRS 255
Query: 137 LASRCLQSEARERPNAKSLV 156
L S+ + R+RP+ S++
Sbjct: 256 LVSQLFKRNPRDRPSVNSIL 275
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVT 79
++ DL A IL ++ +++ FGL + +R G + + +T PE GR T
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 442
Query: 80 PESVVYSFGTMLLDLLSGKHIP 101
+S V+SFG +L +L + +P
Sbjct: 443 IKSDVWSFGILLTELTTKGRVP 464
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP--- 69
+ A++YC K ++ DL A +L D D N +++ FG G P
Sbjct: 122 IVSAVQYCHQK-FIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAA 180
Query: 70 PEYMRTGRVT-PESVVYSFGTMLLDLLSG 97
PE + + PE V+S G +L L+SG
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 11 LYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS-RDG---KSYST 63
YLA+ AL + KG +Y DL I+ + G+ +L+ FGL K S DG +
Sbjct: 125 FYLAEISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCG 183
Query: 64 NLAFTPPEY-MRTGRVTPESVVYSFGTMLLDLLSGKHIPP 102
+ + PE MR+G +S G ++ D+L+G PP
Sbjct: 184 TIEYMAPEILMRSGHNRAVD-WWSLGALMYDMLTGA--PP 220
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 16/173 (9%)
Query: 6 RLRVALYLAQALEYCSSKGRALYHDLNAYRILF-----DKDGNP---RLSSFGLMKNSRD 57
+L VA LA A+ + + ++ ++ A IL K GNP +LS G+
Sbjct: 115 KLEVAKQLAWAMHFLE-ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP 173
Query: 58 GKSYSTNLAFTPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL 116
+ + PPE + + + + +SFGT L ++ SG P S ALD R F
Sbjct: 174 KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLS-ALDSQRKLQFY- 231
Query: 117 LMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVP 169
+ EL L + C+ E RP+ ++++ L SL VP
Sbjct: 232 ----EDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVP 280
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS---YSTNLAFTP 69
+ A++YC K ++ DL A +L D D N +++ FG G + + +
Sbjct: 122 IVSAVQYCHQKF-IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAA 180
Query: 70 PEYMRTGRVT-PESVVYSFGTMLLDLLSG 97
PE + + PE V+S G +L L+SG
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 11/99 (11%)
Query: 9 VALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-----NSRDGKS 60
V +Y+ + ALE+ G +Y D+ IL D +G+ L+ FGL K +
Sbjct: 161 VQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD 219
Query: 61 YSTNLAFTPPEYMRTGRVTPESVV--YSFGTMLLDLLSG 97
+ + + P+ +R G + V +S G ++ +LL+G
Sbjct: 220 FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 6 RLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN 64
RL +A +A+ + Y ++ + H +L + +L DK ++ FGL + S +
Sbjct: 139 RLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKS 198
Query: 65 LAFTP----PEYMRTGRVTPESVVYSFGTMLLDL 94
A TP PE +R +S VYSFG +L +L
Sbjct: 199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGKSYSTNLAFTPPEYMRTGRVT 79
++ DL A IL ++ +++ FGL + +R G + + +T PE GR T
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFP--IKWTAPEAALYGRFT 360
Query: 80 PESVVYSFGTMLLDLLSGKHIP 101
+S V+SFG +L +L + +P
Sbjct: 361 IKSDVWSFGILLTELTTKGRVP 382
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN-----L 65
+A ++Y S G ++ DL A IL + + ++S FGL + D +Y+T +
Sbjct: 127 IASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH 125
+T PE + + T S V+S+G +L +++S P + +++ + +D
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDEGYRLP 241
Query: 126 FSNDEGTELVRLASRCLQSEARERPNAKSLV 156
D L +L C Q + RP + +V
Sbjct: 242 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 272
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN-----L 65
+A ++Y S G ++ DL A IL + + ++S FGL + D +Y+T +
Sbjct: 127 IASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH 125
+T PE + + T S V+S+G +L +++S P + +++ + +D
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDEGYRLP 241
Query: 126 FSNDEGTELVRLASRCLQSEARERPNAKSLV 156
D L +L C Q + RP + +V
Sbjct: 242 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 272
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST-----NLAF 67
+ A+ Y S+G A + DL +LFD+ +L FGL + K Y +LA+
Sbjct: 117 IVSAVAYVHSQGYA-HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAY 175
Query: 68 TPPEYMR-TGRVTPESVVYSFGTMLLDLLSG 97
PE ++ + E+ V+S G +L L+ G
Sbjct: 176 AAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 16 ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA---FTPPEY 72
A+EYC + + ++ DL +L D + N +++ FGL DG T+ + PE
Sbjct: 120 AIEYCH-RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 178
Query: 73 MRTGRVT--PESVVYSFGTMLLDLLSGK 98
+ G++ PE V+S G +L +L G+
Sbjct: 179 I-NGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN-----L 65
+A ++Y S G ++ DL A IL + + ++S FGL + D +Y+T +
Sbjct: 144 IASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 202
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH 125
+T PE + + T S V+S+G +L +++S P + +++ + +D
Sbjct: 203 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDEGYRLP 258
Query: 126 FSNDEGTELVRLASRCLQSEARERPNAKSLV 156
D L +L C Q + RP + +V
Sbjct: 259 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 289
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN-----L 65
+A ++Y S G ++ DL A IL + + ++S FGL + D +Y+T +
Sbjct: 156 IASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPI 214
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH 125
+T PE + + T S V+S+G +L +++S P + +++ + +D
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDEGYRLP 270
Query: 126 FSNDEGTELVRLASRCLQSEARERPNAKSLV 156
D L +L C Q + RP + +V
Sbjct: 271 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 19/165 (11%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------STNL 65
+ + +EY +K R ++ DL IL + + ++ FGL K K + +
Sbjct: 121 ICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 179
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLMDSA 121
+ PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 180 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 239
Query: 122 LE-----GHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISL 159
+E G +G E+ + + C + +RP+ + L + +
Sbjct: 240 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 284
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 16/173 (9%)
Query: 6 RLRVALYLAQALEYCSSKGRALYHDLNAYRILF-----DKDGNP---RLSSFGLMKNSRD 57
+L VA LA A+ + + ++ ++ A IL K GNP +LS G+
Sbjct: 115 KLEVAKQLAAAMHFLE-ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP 173
Query: 58 GKSYSTNLAFTPPEYMRTGR-VTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLL 116
+ + PPE + + + + +SFGT L ++ SG P S ALD R F
Sbjct: 174 KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLS-ALDSQRKLQFY- 231
Query: 117 LMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVP 169
+ EL L + C+ E RP+ ++++ L SL VP
Sbjct: 232 ----EDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVP 280
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 13/105 (12%)
Query: 16 ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL-MKNSRDGKSYSTNLAFTP----P 70
AL Y + ++ DL A ILF DG+ +L+ FG+ KN+R + TP P
Sbjct: 120 ALNYLHD-NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAP 178
Query: 71 EYM--RTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIR 110
E + T + P ++ V+S G L+++ + PP H L+ +R
Sbjct: 179 EVVMCETSKDRPYDYKADVWSLGITLIEMAEIE--PPHHELNPMR 221
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 19/165 (11%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------STNL 65
+ + +EY +K R ++ DL IL + + ++ FGL K K + +
Sbjct: 126 ICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 184
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLMDSA 121
+ PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 244
Query: 122 LE-----GHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISL 159
+E G +G E+ + + C + +RP+ + L + +
Sbjct: 245 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 289
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 19/165 (11%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------STNL 65
+ + +EY +K R ++ DL IL + + ++ FGL K K + +
Sbjct: 154 ICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 212
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLMDSA 121
+ PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 213 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 272
Query: 122 LE-----GHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISL 159
+E G +G E+ + + C + +RP+ + L + +
Sbjct: 273 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 317
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 74/171 (43%), Gaps = 11/171 (6%)
Query: 1 MKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDK-DGN----PRLSSFGLMKN 54
+KW+++LR+ L +A +EY ++ + H DL + I D N +++ FG +
Sbjct: 119 IKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ 178
Query: 55 SRDGKS-YSTNLAFTPPEYM--RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS 111
S S N + PE + T ++ YSF +L +L+G+ ++ I+
Sbjct: 179 SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF 238
Query: 112 KNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 162
N ++ + L D L + C + ++RP+ +V L L
Sbjct: 239 IN--MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 19/165 (11%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------STNL 65
+ + +EY +K R ++ DL IL + + ++ FGL K K + +
Sbjct: 129 ICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 187
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLMDSA 121
+ PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 188 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 247
Query: 122 LE-----GHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISL 159
+E G +G E+ + + C + +RP+ + L + +
Sbjct: 248 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 292
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP--- 69
+ A++YC K ++ DL A +L D D N +++ FG G P
Sbjct: 122 IVSAVQYCHQKF-IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAA 180
Query: 70 PEYMRTGRVT-PESVVYSFGTMLLDLLSG 97
PE + + PE V+S G +L L+SG
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 19/165 (11%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------STNL 65
+ + +EY +K R ++ DL IL + + ++ FGL K K + +
Sbjct: 123 ICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 181
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLMDSA 121
+ PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 241
Query: 122 LE-----GHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISL 159
+E G +G E+ + + C + +RP+ + L + +
Sbjct: 242 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 286
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 12/157 (7%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN------LA 66
+A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ Y L
Sbjct: 153 VAKGMEFLASR-KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 67 FTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGH 125
+ PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGTRMR 267
Query: 126 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 162
+ E+ + C E +RP LV L +L
Sbjct: 268 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 19/165 (11%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------STNL 65
+ + +EY +K R ++ DL IL + + ++ FGL K K + +
Sbjct: 122 ICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 180
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLMDSA 121
+ PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 181 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 240
Query: 122 LE-----GHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISL 159
+E G +G E+ + + C + +RP+ + L + +
Sbjct: 241 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 285
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 19/165 (11%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------STNL 65
+ + +EY +K R ++ DL IL + + ++ FGL K K + +
Sbjct: 126 ICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 184
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLMDSA 121
+ PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 244
Query: 122 LE-----GHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISL 159
+E G +G E+ + + C + +RP+ + L + +
Sbjct: 245 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 289
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 19/165 (11%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------STNL 65
+ + +EY +K R ++ DL IL + + ++ FGL K K + +
Sbjct: 141 ICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 199
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLMDSA 121
+ PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 200 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 259
Query: 122 LE-----GHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISL 159
+E G +G E+ + + C + +RP+ + L + +
Sbjct: 260 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 304
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 8/98 (8%)
Query: 8 RVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KS 60
R Y AQ LE+ + +Y DL +L D DGN R+S GL + G K
Sbjct: 290 RAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 61 YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 98
Y+ F PE + ++ G L ++++ +
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 12/172 (6%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
L A +A+ +E+ K ++ DL A +L ++ FGL ++ +Y
Sbjct: 175 LCFAYQVAKGMEFLEFKS-CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGN 233
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMD 119
+ + PE + G T +S V+S+G +L ++ S G + P +D NF L+
Sbjct: 234 ARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD----ANFYKLIQ 289
Query: 120 SALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSY 171
+ + E+ + C ++R+RP+ +L L +AE Y
Sbjct: 290 NGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEAMY 341
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 19/165 (11%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------STNL 65
+ + +EY +K R ++ DL IL + + ++ FGL K K + +
Sbjct: 127 ICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 185
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLMDSA 121
+ PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 186 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 245
Query: 122 LE-----GHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISL 159
+E G +G E+ + + C + +RP+ + L + +
Sbjct: 246 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 290
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 8 RVALY---LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY--- 61
R+ LY + + +EY S+ R ++ DL A IL + + + +++ FGL K K Y
Sbjct: 128 RLLLYSSQICKGMEYLGSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 186
Query: 62 ----STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 96
+ + + PE + + +S V+SFG +L +L +
Sbjct: 187 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 19/165 (11%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------STNL 65
+ + +EY +K R ++ DL IL + + ++ FGL K K + +
Sbjct: 128 ICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 186
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLMDSA 121
+ PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 187 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 246
Query: 122 LE-----GHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISL 159
+E G +G E+ + + C + +RP+ + L + +
Sbjct: 247 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 291
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 19/165 (11%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------STNL 65
+ + +EY +K R ++ DL IL + + ++ FGL K K + +
Sbjct: 130 ICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 188
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLMDSA 121
+ PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 189 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 248
Query: 122 LE-----GHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISL 159
+E G +G E+ + + C + +RP+ + L + +
Sbjct: 249 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 293
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN-----L 65
+A ++Y S G ++ DL A IL + + ++S FGL + D +Y+T +
Sbjct: 154 IASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 212
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH 125
+T PE + + T S V+S+G +L +++S P + +++ + +D
Sbjct: 213 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDEGYRLP 268
Query: 126 FSNDEGTELVRLASRCLQSEARERPNAKSLV 156
D L +L C Q + RP + +V
Sbjct: 269 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 299
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN-----L 65
+A ++Y S G ++ DL A IL + + ++S FGL + D +Y+T +
Sbjct: 156 IASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH 125
+T PE + + T S V+S+G +L +++S P + +++ + +D
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDEGYRLP 270
Query: 126 FSNDEGTELVRLASRCLQSEARERPNAKSLV 156
D L +L C Q + RP + +V
Sbjct: 271 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 19/100 (19%)
Query: 10 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-NSRDGKSYSTNLAFT 68
A +A L + SKG +Y DL ++ D +G+ +++ FG+ K N DG +T
Sbjct: 127 AAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG--VTTKXFCG 183
Query: 69 PPEYMRTGRVTPESVVY----------SFGTMLLDLLSGK 98
P+Y + PE + Y +FG +L ++L+G+
Sbjct: 184 TPDY-----IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN-----L 65
+A ++Y S G ++ DL A IL + + ++S FGL + D +Y+T +
Sbjct: 156 IASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH 125
+T PE + + T S V+S+G +L +++S P + +++ + +D
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDEGYRLP 270
Query: 126 FSNDEGTELVRLASRCLQSEARERPNAKSLV 156
D L +L C Q + RP + +V
Sbjct: 271 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 19/165 (11%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------STNL 65
+ + +EY +K R ++ DL IL + + ++ FGL K K + +
Sbjct: 123 ICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 181
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLMDSA 121
+ PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 241
Query: 122 LE-----GHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISL 159
+E G +G E+ + + C + +RP+ + L + +
Sbjct: 242 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 286
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 8/98 (8%)
Query: 8 RVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KS 60
R Y AQ LE+ + +Y DL +L D DGN R+S GL + G K
Sbjct: 290 RAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 61 YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 98
Y+ F PE + ++ G L ++++ +
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 8/98 (8%)
Query: 8 RVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KS 60
R Y AQ LE+ + +Y DL +L D DGN R+S GL + G K
Sbjct: 290 RAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 61 YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 98
Y+ F PE + ++ G L ++++ +
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 19/100 (19%)
Query: 10 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-NSRDGKSYSTNLAFT 68
A +A L + SKG +Y DL ++ D +G+ +++ FG+ K N DG +T
Sbjct: 448 AAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG--VTTKXFCG 504
Query: 69 PPEYMRTGRVTPESVVY----------SFGTMLLDLLSGK 98
P+Y + PE + Y +FG +L ++L+G+
Sbjct: 505 TPDY-----IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 19/165 (11%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------STNL 65
+ + +EY +K R ++ DL IL + + ++ FGL K K + +
Sbjct: 126 ICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 184
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLMDSA 121
+ PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 244
Query: 122 LE-----GHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISL 159
+E G +G E+ + + C + +RP+ + L + +
Sbjct: 245 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 289
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 67/155 (43%), Gaps = 16/155 (10%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSS---FGLMKN------SRD 57
L VA +A +Y + ++ D+ A L G R++ FG+ ++ R
Sbjct: 144 LHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRK 202
Query: 58 GKSYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-PSHALDLIRSKNFLL 116
G + + PPE G T ++ +SFG +L ++ S ++P PS + ++ L
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEVLE 257
Query: 117 LMDSALEGHFSNDEGTELVRLASRCLQSEARERPN 151
+ S + + R+ ++C Q + +RPN
Sbjct: 258 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 292
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 8 RVALY---LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY--- 61
R+ LY + + +EY S+ R ++ DL A IL + + + +++ FGL K K Y
Sbjct: 115 RLLLYSSQICKGMEYLGSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 173
Query: 62 ----STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 96
+ + + PE + + +S V+SFG +L +L +
Sbjct: 174 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 8/98 (8%)
Query: 8 RVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG----KS 60
R Y AQ LE+ + +Y DL +L D DGN R+S GL + G K
Sbjct: 290 RAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 61 YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 98
Y+ F PE + ++ G L ++++ +
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 12/157 (7%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN------LA 66
+A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ Y L
Sbjct: 153 VAKGMEFLASR-KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 67 FTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSALEGH 125
+ PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFXRRLKEGTRMR 267
Query: 126 FSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 162
+ E+ + C E +RP LV L +L
Sbjct: 268 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN-----L 65
+A ++Y S G ++ DL A IL + + ++S FGL + D +Y+T +
Sbjct: 156 IASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH 125
+T PE + + T S V+S+G +L +++S P + +++ + +D
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDEGYRLP 270
Query: 126 FSNDEGTELVRLASRCLQSEARERPNAKSLV 156
D L +L C Q + RP + +V
Sbjct: 271 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN-----L 65
+A ++Y S G ++ DL A IL + + ++S FGL + D +Y+T +
Sbjct: 156 IASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH 125
+T PE + + T S V+S+G +L +++S P + +++ + +D
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDEGYRLP 270
Query: 126 FSNDEGTELVRLASRCLQSEARERPNAKSLV 156
D L +L C Q + RP + +V
Sbjct: 271 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN-----L 65
+A ++Y S G ++ DL A IL + + ++S FGL + D +Y+T +
Sbjct: 156 IASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH 125
+T PE + + T S V+S+G +L +++S P + +++ + +D
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDEGYRLP 270
Query: 126 FSNDEGTELVRLASRCLQSEARERPNAKSLV 156
D L +L C Q + RP + +V
Sbjct: 271 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 8 RVALY---LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY--- 61
R+ LY + + +EY S+ R ++ DL A IL + + + +++ FGL K K Y
Sbjct: 116 RLLLYSSQICKGMEYLGSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 174
Query: 62 ----STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 96
+ + + PE + + +S V+SFG +L +L +
Sbjct: 175 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 19/165 (11%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-------STNL 65
+ + +EY +K R ++ DL IL + + ++ FGL K K + +
Sbjct: 141 ICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 199
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS---GKHIPPSHALDLI-RSKNFLLLMDSA 121
+ PE + + + S V+SFG +L +L + PP+ + +I K +++
Sbjct: 200 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 259
Query: 122 LE-----GHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISL 159
+E G +G E+ + + C + +RP+ + L + +
Sbjct: 260 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 304
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN-----L 65
+A ++Y S G ++ DL A IL + + ++S FGL + D +Y+T +
Sbjct: 156 IASGMKYLSDMG-FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH 125
+T PE + + T S V+S+G +L +++S P + +++ + +D
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDEGYRLP 270
Query: 126 FSNDEGTELVRLASRCLQSEARERPNAKSLV 156
D L +L C Q + RP + +V
Sbjct: 271 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 8 RVALYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN 64
R Y A+ AL + KG +Y DL +L D +G+ +L+ FG+ K +
Sbjct: 125 RARFYAAEIISALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTAT 183
Query: 65 LAFTP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 101
TP PE ++ P ++ G +L ++L G H P
Sbjct: 184 FCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG-HAP 223
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS-RDG---KSYSTNLAFT 68
+ ALEY S+ +Y D+ ++ DKDG+ +++ FGL K DG K++ +
Sbjct: 114 IVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 172
Query: 69 PPEYMRTGRVTPESVVYSFGTMLLDLLSGK 98
PE + + G ++ +++ G+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 78/180 (43%), Gaps = 19/180 (10%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN------SRDGKS 60
+++A +A + Y ++K + ++ DL A + D ++ FG+ ++ R G
Sbjct: 133 IQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGK 191
Query: 61 YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ + PE ++ G T S ++SFG +L ++ S P L + +MD
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ---GLSNEQVLKFVMDG 248
Query: 121 ALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQH 178
N + T+L+R+ C Q PN + + +++L K+ PS+ + H
Sbjct: 249 GYLDQPDNCPERVTDLMRM---CWQF----NPNMRPTFLEIVNLLKDDLHPSFPEVSFFH 301
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN-----L 65
+A ++Y S G ++ DL A IL + + ++S FGL + D +Y+T +
Sbjct: 156 IASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPI 214
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH 125
+T PE + + T S V+S+G +L +++S P + +++ + +D
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDEGYRLP 270
Query: 126 FSNDEGTELVRLASRCLQSEARERPNAKSLV 156
D L +L C Q + RP + +V
Sbjct: 271 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS-RDG---KSYSTNLAFT 68
+ ALEY S+ +Y D+ ++ DKDG+ +++ FGL K DG K++ +
Sbjct: 117 IVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 175
Query: 69 PPEYMRTGRVTPESVVYSFGTMLLDLLSGK 98
PE + + G ++ +++ G+
Sbjct: 176 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 74/171 (43%), Gaps = 11/171 (6%)
Query: 1 MKWAMRLRVALYLAQALEYCSSKGRALYH-DLNAYRILFDK-DGN----PRLSSFGLMKN 54
+KW+++LR+ L +A +EY ++ + H DL + I D N +++ F L +
Sbjct: 119 IKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQ 178
Query: 55 SRDGKS-YSTNLAFTPPEYM--RTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS 111
S S N + PE + T ++ YSF +L +L+G+ ++ I+
Sbjct: 179 SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF 238
Query: 112 KNFLLLMDSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 162
N ++ + L D L + C + ++RP+ +V L L
Sbjct: 239 IN--MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS-RDG---KSYSTNLAFT 68
+ ALEY S+ +Y D+ ++ DKDG+ +++ FGL K DG K++ +
Sbjct: 114 IVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 172
Query: 69 PPEYMRTGRVTPESVVYSFGTMLLDLLSGK 98
PE + + G ++ +++ G+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 14/161 (8%)
Query: 10 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN-------SRDGKSYS 62
+ +A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ R G +
Sbjct: 154 SFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA-R 211
Query: 63 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSA 121
L + PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEG 267
Query: 122 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 162
+ E+ + C E +RP LV L +L
Sbjct: 268 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 78/180 (43%), Gaps = 19/180 (10%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN------SRDGKS 60
+++A +A + Y ++K + ++ DL A + D ++ FG+ ++ R G
Sbjct: 130 IQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGK 188
Query: 61 YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ + PE ++ G T S ++SFG +L ++ S P L + +MD
Sbjct: 189 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ---GLSNEQVLKFVMDG 245
Query: 121 ALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQH 178
N + T+L+R+ C Q + RP + +++L K+ PS+ + H
Sbjct: 246 GYLDQPDNCPERVTDLMRM---CWQFNPKMRPT----FLEIVNLLKDDLHPSFPEVSFFH 298
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 78/180 (43%), Gaps = 19/180 (10%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN------SRDGKS 60
+++A +A + Y ++K + ++ DL A + D ++ FG+ ++ R G
Sbjct: 133 IQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGK 191
Query: 61 YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ + PE ++ G T S ++SFG +L ++ S P L + +MD
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ---GLSNEQVLKFVMDG 248
Query: 121 ALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQH 178
N + T+L+R+ C Q + RP + +++L K+ PS+ + H
Sbjct: 249 GYLDQPDNCPERVTDLMRM---CWQFNPKMRPT----FLEIVNLLKDDLHPSFPEVSFFH 301
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/144 (19%), Positives = 65/144 (45%), Gaps = 9/144 (6%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST-----NLAFTPPEYMRTGRVTPE 81
++ DL A L D+D ++S FG+ + D + S+ + ++ PE + + +
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSK 185
Query: 82 SVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSNDEGTELVRLASRC 141
S V++FG ++ ++ S +P DL + +L + + + + ++ C
Sbjct: 186 SDVWAFGILMWEVFSLGKMP----YDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSC 241
Query: 142 LQSEARERPNAKSLVISLMSLQKE 165
+RP + L+ S+ L+++
Sbjct: 242 WHELPEKRPTFQQLLSSIEPLREK 265
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS-RDG---KSYSTNLAFT 68
+ ALEY S+ +Y D+ ++ DKDG+ +++ FGL K DG K + +
Sbjct: 119 IVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYL 177
Query: 69 PPEYMRTGRVTPESVVYSFGTMLLDLLSGK 98
PE + + G ++ +++ G+
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 14/161 (8%)
Query: 10 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN-------SRDGKSYS 62
+ +A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ R G +
Sbjct: 154 SFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDA-R 211
Query: 63 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSA 121
L + PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEG 267
Query: 122 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 162
+ E+ + C E +RP LV L +L
Sbjct: 268 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS-RDG---KSYSTNLAFT 68
+ ALEY S+ +Y D+ ++ DKDG+ +++ FGL K DG K + +
Sbjct: 114 IVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYL 172
Query: 69 PPEYMRTGRVTPESVVYSFGTMLLDLLSGK 98
PE + + G ++ +++ G+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 14/161 (8%)
Query: 10 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN-------SRDGKSYS 62
+ +A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ R G +
Sbjct: 145 SFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA-R 202
Query: 63 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSA 121
L + PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEG 258
Query: 122 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 162
+ E+ + C E +RP LV L +L
Sbjct: 259 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 14/161 (8%)
Query: 10 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN-------SRDGKSYS 62
+ +A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ R G +
Sbjct: 145 SFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA-R 202
Query: 63 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSA 121
L + PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEG 258
Query: 122 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 162
+ E+ + C E +RP LV L +L
Sbjct: 259 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 14/161 (8%)
Query: 10 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN-------SRDGKSYS 62
+ +A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ R G +
Sbjct: 154 SFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA-R 211
Query: 63 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSA 121
L + PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEG 267
Query: 122 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 162
+ E+ + C E +RP LV L +L
Sbjct: 268 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 17/105 (16%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA 66
L + + +A+A+E+ SKG ++ DL I F D ++ FGL+ + T L
Sbjct: 167 LHIFIQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 67 FTPPEYMRTGRV------TPESV----------VYSFGTMLLDLL 95
P G+V +PE + ++S G +L +LL
Sbjct: 226 PMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 6 RLRVALY-LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN-SRDGKSYS- 62
++++ LY L + + +C + R L+ DL +L + DG +L+ FGL + +SY+
Sbjct: 120 QIKIYLYQLLRGVAHCH-QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH 178
Query: 63 --TNLAFTPPEYMRTGRVTPESV-VYSFGTMLLDLLSGKHIPP 102
L + P+ + + SV ++S G + ++++GK + P
Sbjct: 179 EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFP 221
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 16 ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL-MKNSRDGK---SYSTNLAFTPPE 71
AL Y + ++ DL A ILF DG+ +L+ FG+ KN+R + S+ + PE
Sbjct: 147 ALNYLHD-NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPE 205
Query: 72 YM--RTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIR 110
+ T + P ++ V+S G L+++ + PP H L+ +R
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIE--PPHHELNPMR 247
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 6 RLRVALY-LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN-SRDGKSYS- 62
++++ LY L + + +C + R L+ DL +L + DG +L+ FGL + +SY+
Sbjct: 120 QIKIYLYQLLRGVAHCH-QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH 178
Query: 63 --TNLAFTPPEYMRTGRVTPESV-VYSFGTMLLDLLSGKHIPP 102
L + P+ + + SV ++S G + ++++GK + P
Sbjct: 179 EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFP 221
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 8 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA- 66
R+ + A++YC + ++ DL +L D N +++ FGL DG+ +
Sbjct: 115 RLFQQILSAVDYCH-RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGS 173
Query: 67 --FTPPEYMRTGRV--TPESVVYSFGTMLLDLLSG------KHIP 101
+ PE + +GR+ PE ++S G +L LL G +H+P
Sbjct: 174 PNYAAPEVI-SGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP 217
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 16 ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL-MKNSRDGK---SYSTNLAFTPPE 71
AL Y + ++ DL A ILF DG+ +L+ FG+ KN+R + S+ + PE
Sbjct: 147 ALNYLHD-NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPE 205
Query: 72 YM--RTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIR 110
+ T + P ++ V+S G L+++ + PP H L+ +R
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIE--PPHHELNPMR 247
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS-RDG---KSYSTNLAFT 68
+ ALEY S+ +Y D+ ++ DKDG+ +++ FGL K DG K + +
Sbjct: 114 IVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYL 172
Query: 69 PPEYMRTGRVTPESVVYSFGTMLLDLLSGK 98
PE + + G ++ +++ G+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS-RDG---KSYSTNLAFT 68
+ ALEY S+ +Y D+ ++ DKDG+ +++ FGL K DG K + +
Sbjct: 114 IVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYL 172
Query: 69 PPEYMRTGRVTPESVVYSFGTMLLDLLSGK 98
PE + + G ++ +++ G+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 69/151 (45%), Gaps = 12/151 (7%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS--YSTN-----L 65
+A + Y + G ++ DL A IL + + ++S FGL + D Y+T +
Sbjct: 154 IAAGMRYLADMG-YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPV 212
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH 125
+T PE ++ + T S V+S+G ++ +++S P D+ +++ + ++
Sbjct: 213 RWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP---YWDM-SNQDVIKAIEEGYRLP 268
Query: 126 FSNDEGTELVRLASRCLQSEARERPNAKSLV 156
D L +L C Q E ERP + +V
Sbjct: 269 APMDCPAGLHQLMLDCWQKERAERPKFEQIV 299
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 14/161 (8%)
Query: 10 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN-------SRDGKSYS 62
+ +A+ +E+ +S+ + ++ DL A IL + ++ FGL ++ R G +
Sbjct: 154 SFQVAKGMEFLASR-KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA-R 211
Query: 63 TNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS-GKHIPPSHALDLIRSKNFLLLMDSA 121
L + PE + T +S V+SFG +L ++ S G P +D + F +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEG 267
Query: 122 LEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSL 162
+ E+ + C E +RP LV L +L
Sbjct: 268 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFG-LMKNSRDGKSYSTNLAFTP----PEYMRT-----G 76
++ D+ IL D +G+ RL+ FG +K DG S+ TP PE ++ G
Sbjct: 197 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKG 256
Query: 77 RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS 111
R PE +S G + ++L G+ P +A L+ +
Sbjct: 257 RYGPECDWWSLGVCMYEMLYGE--TPFYAESLVET 289
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 78/180 (43%), Gaps = 19/180 (10%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
+++A +A + Y ++K + ++ DL A + D ++ FG+ ++ + Y
Sbjct: 133 IQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK 191
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ + PE ++ G T S ++SFG +L ++ S P L + +MD
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ---GLSNEQVLKFVMDG 248
Query: 121 ALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQH 178
N + T+L+R+ C Q + RP + +++L K+ PS+ + H
Sbjct: 249 GYLDQPDNCPERVTDLMRM---CWQFNPKMRPT----FLEIVNLLKDDLHPSFPEVSFFH 301
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS-RDGKSYSTNLA---FT 68
++ AL Y +G +Y DL +L D +G+ +L+ +G+ K R G + ST +
Sbjct: 162 ISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYI 220
Query: 69 PPEYMRTGRVTPESVVYSFGTMLLDLLSGK 98
PE +R ++ G ++ ++++G+
Sbjct: 221 APEILRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 78/180 (43%), Gaps = 19/180 (10%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN------SRDGKS 60
+++A +A + Y ++K + ++ DL A + D ++ FG+ ++ R G
Sbjct: 133 IQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGK 191
Query: 61 YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ + PE ++ G T S ++SFG +L ++ S P L + +MD
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ---GLSNEQVLKFVMDG 248
Query: 121 ALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQH 178
N + T+L+R+ C Q + RP + +++L K+ PS+ + H
Sbjct: 249 GYLDQPDNCPERVTDLMRM---CWQFNPKMRPT----FLEIVNLLKDDLHPSFPEVSFFH 301
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 78/180 (43%), Gaps = 19/180 (10%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN------SRDGKS 60
+++A +A + Y ++K + ++ DL A + D ++ FG+ ++ R G
Sbjct: 132 IQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK 190
Query: 61 YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ + PE ++ G T S ++SFG +L ++ S P L + +MD
Sbjct: 191 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ---GLSNEQVLKFVMDG 247
Query: 121 ALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQH 178
N + T+L+R+ C Q + RP + +++L K+ PS+ + H
Sbjct: 248 GYLDQPDNCPERVTDLMRM---CWQFNPKMRPT----FLEIVNLLKDDLHPSFPEVSFFH 300
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 62/157 (39%), Gaps = 14/157 (8%)
Query: 8 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 67
++A+ + +ALE+ SK ++ D+ +L + G + FG+ D + +
Sbjct: 140 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGC 199
Query: 68 TPPEYMRTGRVTPE---------SVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLM 118
P Y R+ PE S ++S G ++L + S + K +
Sbjct: 200 KP--YXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEP 257
Query: 119 DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSL 155
L ++ E V S+CL+ ++ERP L
Sbjct: 258 SPQLP---ADKFSAEFVDFTSQCLKKNSKERPTYPEL 291
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA---FTP 69
+ A+EYC + + ++ DL +L D+ N +++ FGL DG T+ +
Sbjct: 122 IISAVEYCH-RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAA 180
Query: 70 PEYMRTGRV--TPESVVYSFGTMLLDLL 95
PE + +G++ PE V+S G +L +L
Sbjct: 181 PEVI-SGKLYAGPEVDVWSCGVILYVML 207
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA---FTP 69
+ A+EYC + + ++ DL +L D+ N +++ FGL DG T+ +
Sbjct: 112 IISAVEYCH-RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAA 170
Query: 70 PEYMRTGRVT--PESVVYSFGTMLLDLL 95
PE + +G++ PE V+S G +L +L
Sbjct: 171 PEVI-SGKLYAGPEVDVWSCGVILYVML 197
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA---FTP 69
+ A+EYC + + ++ DL +L D+ N +++ FGL DG T+ +
Sbjct: 121 IISAVEYCH-RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAA 179
Query: 70 PEYMRTGRV--TPESVVYSFGTMLLDLL 95
PE + +G++ PE V+S G +L +L
Sbjct: 180 PEVI-SGKLYAGPEVDVWSCGVILYVML 206
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA---FTP 69
+ A+EYC + + ++ DL +L D+ N +++ FGL DG T+ +
Sbjct: 116 IISAVEYCH-RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAA 174
Query: 70 PEYMRTGRVT--PESVVYSFGTMLLDLL 95
PE + +G++ PE V+S G +L +L
Sbjct: 175 PEVI-SGKLYAGPEVDVWSCGVILYVML 201
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 16 ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL-MKNSRDGKSYSTNLA---FTPPE 71
AL Y + ++ DL A ILF DG+ +L+ FG+ KN+R + + + PE
Sbjct: 147 ALNYLHD-NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPE 205
Query: 72 YM--RTGRVTP---ESVVYSFGTMLLDLLSGKHIPPSHALDLIR 110
+ T + P ++ V+S G L+++ + PP H L+ +R
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIE--PPHHELNPMR 247
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 26 ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-----LAFTPPEYMRTGRVTP 80
++ DL A L ++ ++S FG+ + D + S+ + + PE R +
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 184
Query: 81 ESVVYSFGTMLLDLLSGKHIP 101
+S V+SFG ++ ++ S IP
Sbjct: 185 KSDVWSFGVLMWEVFSEGKIP 205
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYMR----------TG 76
++ D+ +L D +G+ RL+ FG D + +++A P+Y+ G
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 256
Query: 77 RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS 111
+ PE +S G + ++L G+ P +A L+ +
Sbjct: 257 KYGPECDWWSLGVCMYEMLYGE--TPFYAESLVET 289
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 26 ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-----LAFTPPEYMRTGRVTP 80
++ DL A L ++ ++S FG+ + D + S+ + + PE R +
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 186
Query: 81 ESVVYSFGTMLLDLLSGKHIP 101
+S V+SFG ++ ++ S IP
Sbjct: 187 KSDVWSFGVLMWEVFSEGKIP 207
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYMR----------TG 76
++ D+ +L D +G+ RL+ FG D + +++A P+Y+ G
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 272
Query: 77 RVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRS 111
+ PE +S G + ++L G+ P +A L+ +
Sbjct: 273 KYGPECDWWSLGVCMYEMLYGE--TPFYAESLVET 305
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 13 LAQALEYCSS-----KGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN--- 64
L L+ C + ++ DL A L ++ ++S FG+ + D + S+
Sbjct: 106 LGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 165
Query: 65 --LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP 101
+ + PE R + +S V+SFG ++ ++ S IP
Sbjct: 166 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 204
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 80/170 (47%), Gaps = 16/170 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
L +A ++ A+EY K ++ DL A L ++ +++ FGL + G +Y+ +
Sbjct: 119 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 176
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ +T PE + + + +S V++FG +L ++ + + P +DL + LL D
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYE-LLEKDY 234
Query: 121 ALEGHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEV 168
+E EG ++ L C Q +RP+ + + ++ +E+ +
Sbjct: 235 RME----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 280
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 80/170 (47%), Gaps = 16/170 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
L +A ++ A+EY K ++ DL A L ++ +++ FGL + G +Y+ +
Sbjct: 116 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 173
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ +T PE + + + +S V++FG +L ++ + + P +DL + LL D
Sbjct: 174 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYE-LLEKDY 231
Query: 121 ALEGHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEV 168
+E EG ++ L C Q +RP+ + + ++ +E+ +
Sbjct: 232 RME----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 277
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 80/170 (47%), Gaps = 16/170 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
L +A ++ A+EY K ++ DL A L ++ +++ FGL + G +Y+ +
Sbjct: 114 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 171
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ +T PE + + + +S V++FG +L ++ + + P +DL + LL D
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYE-LLEKDY 229
Query: 121 ALEGHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEV 168
+E EG ++ L C Q +RP+ + + ++ +E+ +
Sbjct: 230 RME----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 275
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 26 ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-----LAFTPPEYMRTGRVTP 80
++ DL A L ++ ++S FG+ + D + S+ + + PE R +
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 181
Query: 81 ESVVYSFGTMLLDLLSGKHIP 101
+S V+SFG ++ ++ S IP
Sbjct: 182 KSDVWSFGVLMWEVFSEGKIP 202
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 80/170 (47%), Gaps = 16/170 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
L +A ++ A+EY K ++ DL A L ++ +++ FGL + G +Y+ +
Sbjct: 116 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 173
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ +T PE + + + +S V++FG +L ++ + + P +DL + LL D
Sbjct: 174 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYE-LLEKDY 231
Query: 121 ALEGHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEV 168
+E EG ++ L C Q +RP+ + + ++ +E+ +
Sbjct: 232 RME----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 277
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 80/170 (47%), Gaps = 16/170 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
L +A ++ A+EY K ++ DL A L ++ +++ FGL + G +Y+ +
Sbjct: 114 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 171
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ +T PE + + + +S V++FG +L ++ + + P +DL + LL D
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYE-LLEKDY 229
Query: 121 ALEGHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEV 168
+E EG ++ L C Q +RP+ + + ++ +E+ +
Sbjct: 230 RME----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 275
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 35.0 bits (79), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 26 ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-----LAFTPPEYMRTGRVTP 80
++ DL A L ++ ++S FG+ + D + S+ + + PE R +
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 183
Query: 81 ESVVYSFGTMLLDLLSGKHIP 101
+S V+SFG ++ ++ S IP
Sbjct: 184 KSDVWSFGVLMWEVFSEGKIP 204
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 80/170 (47%), Gaps = 16/170 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
L +A ++ A+EY K ++ DL A L ++ +++ FGL + G +Y+ +
Sbjct: 114 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 171
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ +T PE + + + +S V++FG +L ++ + + P +DL + LL D
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYE-LLEKDY 229
Query: 121 ALEGHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEV 168
+E EG ++ L C Q +RP+ + + ++ +E+ +
Sbjct: 230 RME----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 275
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 80/170 (47%), Gaps = 16/170 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
L +A ++ A+EY K ++ DL A L ++ +++ FGL + G +Y+ +
Sbjct: 114 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 171
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ +T PE + + + +S V++FG +L ++ + + P +DL + LL D
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYE-LLEKDY 229
Query: 121 ALEGHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEV 168
+E EG ++ L C Q +RP+ + + ++ +E+ +
Sbjct: 230 RME----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 275
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 80/170 (47%), Gaps = 16/170 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
L +A ++ A+EY K ++ DL A L ++ +++ FGL + G +Y+ +
Sbjct: 119 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 176
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ +T PE + + + +S V++FG +L ++ + + P +DL + LL D
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYE-LLEKDY 234
Query: 121 ALEGHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEV 168
+E EG ++ L C Q +RP+ + + ++ +E+ +
Sbjct: 235 RME----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 280
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 80/170 (47%), Gaps = 16/170 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
L +A ++ A+EY K ++ DL A L ++ +++ FGL + G +Y+ +
Sbjct: 127 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 184
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ +T PE + + + +S V++FG +L ++ + + P +DL + LL D
Sbjct: 185 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYE-LLEKDY 242
Query: 121 ALEGHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEV 168
+E EG ++ L C Q +RP+ + + ++ +E+ +
Sbjct: 243 RME----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 288
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 68/153 (44%), Gaps = 16/153 (10%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN-----L 65
++ ++Y S G ++ DL A IL + + ++S FGL + D +Y+T +
Sbjct: 133 ISAGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 191
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHAL--DLIRSKNFLLLMDSALE 123
+T PE + + T S V+S+G ++ +++S P D+I++ + S +
Sbjct: 192 RWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPM- 250
Query: 124 GHFSNDEGTELVRLASRCLQSEARERPNAKSLV 156
D L +L C Q E RP +V
Sbjct: 251 -----DCPAALYQLMLDCWQKERNSRPKFDEIV 278
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 34.7 bits (78), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 26 ALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-----LAFTPPEYMRTGRVTP 80
++ DL A L ++ ++S FG+ + D + S+ + + PE R +
Sbjct: 144 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 203
Query: 81 ESVVYSFGTMLLDLLSGKHIP 101
+S V+SFG ++ ++ S IP
Sbjct: 204 KSDVWSFGVLMWEVFSEGKIP 224
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP--- 69
++ AL Y +G +Y DL +L D +G+ +L+ +G+ K ++ TP
Sbjct: 130 ISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYI 188
Query: 70 -PEYMRTGRVTPESVVYSFGTMLLDLLSGK 98
PE +R ++ G ++ ++++G+
Sbjct: 189 APEILRGEDYGFSVDWWALGVLMFEMMAGR 218
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 34.3 bits (77), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP--- 69
++ AL Y +G +Y DL +L D +G+ +L+ +G+ K ++ TP
Sbjct: 115 ISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYI 173
Query: 70 -PEYMRTGRVTPESVVYSFGTMLLDLLSGK 98
PE +R ++ G ++ ++++G+
Sbjct: 174 APEILRGEDYGFSVDWWALGVLMFEMMAGR 203
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP--- 69
++ AL Y +G +Y DL +L D +G+ +L+ +G+ K ++ TP
Sbjct: 119 ISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYI 177
Query: 70 -PEYMRTGRVTPESVVYSFGTMLLDLLSGK 98
PE +R ++ G ++ ++++G+
Sbjct: 178 APEILRGEDYGFSVDWWALGVLMFEMMAGR 207
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 10/155 (6%)
Query: 10 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 69
+L + +A+ Y S ++ D+ IL +L FGL + D Y ++ P
Sbjct: 115 SLQICKAMAYLESIN-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP 173
Query: 70 -----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG 124
PE + R T S V+ F + ++LS P + +K+ + +++
Sbjct: 174 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP----FFWLENKDVIGVLEKGDRL 229
Query: 125 HFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 159
+ L L +RC + +RP LV SL
Sbjct: 230 PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 264
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 78/180 (43%), Gaps = 19/180 (10%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN------SRDGKS 60
+++A +A + Y ++K + ++ +L A + D ++ FG+ ++ R G
Sbjct: 134 IQMAAEIADGMAYLNAK-KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK 192
Query: 61 YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ + PE ++ G T S ++SFG +L ++ S P L + +MD
Sbjct: 193 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ---GLSNEQVLKFVMDG 249
Query: 121 ALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQH 178
N + T+L+R+ C Q PN + + +++L K+ PS+ + H
Sbjct: 250 GYLDQPDNCPERVTDLMRM---CWQF----NPNMRPTFLEIVNLLKDDLHPSFPEVSFFH 302
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 86/206 (41%), Gaps = 30/206 (14%)
Query: 7 LRVALY-LAQALEYCSSKGRALYHDLNAYRILFDKDGNP-RLSSFGLMKNSRDGKSYSTN 64
+R +Y L +AL+YC SKG ++ D+ + ++ D RL +GL + + Y+
Sbjct: 134 IRFYMYELLKALDYCHSKG-IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVR 192
Query: 65 LA---FTPPEYMRTGRVTPESV-VYSFGTMLLDLLSGKHIPPSHALD----LIRSKN--- 113
+A F PE + ++ S+ ++S G ML ++ + P H D L+R
Sbjct: 193 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRRE-PFFHGQDNYDQLVRIAKVLG 251
Query: 114 ------FLLLMDSALEGHFSNDEGTELVRLASRCLQSEARE--RPNAKSLVISLMSLQ-- 163
+L L+ HF++ G + + SE R P A L+ L+
Sbjct: 252 TEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQ 311
Query: 164 -----KEAEVPSYVLLGIQHETAPST 184
KEA Y ++ ++ PS
Sbjct: 312 QRLTAKEAMEHPYFYPVVKEQSQPSA 337
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP--- 69
+A AL Y S +Y DL IL D G+ L+ FGL K + + S ++ TP
Sbjct: 148 IASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYL 206
Query: 70 -PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHA 105
PE + + G +L ++L G +PP ++
Sbjct: 207 APEVLHKQPYDRTVDWWCLGAVLYEMLYG--LPPFYS 241
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
L +A ++ A+EY K ++ DL A L ++ +++ FGL + G +Y+ +
Sbjct: 118 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 175
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ +T PE + + + +S V++FG +L ++ + + P +DL + LL D
Sbjct: 176 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYE-LLEKDY 233
Query: 121 ALEGHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 166
+E EG ++ L C Q +RP+ + + ++ +E+
Sbjct: 234 RME----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 277
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 78/180 (43%), Gaps = 19/180 (10%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN------SRDGKS 60
+++A +A + Y ++K + ++ +L A + D ++ FG+ ++ R G
Sbjct: 133 IQMAAEIADGMAYLNAK-KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK 191
Query: 61 YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ + PE ++ G T S ++SFG +L ++ S P L + +MD
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ---GLSNEQVLKFVMDG 248
Query: 121 ALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYVLLGIQH 178
N + T+L+R+ C Q PN + + +++L K+ PS+ + H
Sbjct: 249 GYLDQPDNCPERVTDLMRM---CWQF----NPNMRPTFLEIVNLLKDDLHPSFPEVSFFH 301
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 16/153 (10%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
L +A ++ A+EY K ++ DL A L ++ +++ FGL + G +Y+ +
Sbjct: 114 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 171
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ +T PE + + + +S V++FG +L ++ + + P +DL + LL D
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYE-LLEKDY 229
Query: 121 ALEGHFSNDEGT--ELVRLASRCLQSEARERPN 151
+E EG ++ L C Q +RP+
Sbjct: 230 RME----RPEGCPEKVYELMRACWQWNPSDRPS 258
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
L +A ++ A+EY K ++ DL A L ++ +++ FGL + G +Y+ +
Sbjct: 114 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 171
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ +T PE + + + +S V++FG +L ++ + + P +DL + LL D
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYE-LLEKDY 229
Query: 121 ALEGHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 166
+E EG ++ L C Q +RP+ + + ++ +E+
Sbjct: 230 RME----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 16/153 (10%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
L +A ++ A+EY K ++ DL A L ++ +++ FGL + G +Y+ +
Sbjct: 119 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 176
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ +T PE + + + +S V++FG +L + ++ + P +DL + LL D
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYE-LLEKDY 234
Query: 121 ALEGHFSNDEGT--ELVRLASRCLQSEARERPN 151
+E EG ++ L C Q +RP+
Sbjct: 235 RME----RPEGCPEKVYELMRACWQWNPSDRPS 263
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 8 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA- 66
R+ + ++YC + ++ DL +L D N +++ FGL DG+ +
Sbjct: 120 RLFQQILSGVDYCH-RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGS 178
Query: 67 --FTPPEYMRTGRVT--PESVVYSFGTMLLDLLSG------KHIP 101
+ PE + +GR+ PE ++S G +L LL G H+P
Sbjct: 179 PNYAAPEVI-SGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP 222
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 16/153 (10%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
L +A ++ A+EY K ++ DL A L ++ +++ FGL + G +Y+ +
Sbjct: 119 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 176
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ +T PE + + + +S V++FG +L ++ + + P +DL + LL D
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYE-LLEKDY 234
Query: 121 ALEGHFSNDEGT--ELVRLASRCLQSEARERPN 151
+E EG ++ L C Q +RP+
Sbjct: 235 RME----RPEGCPEKVYELMRACWQWNPSDRPS 263
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 10/155 (6%)
Query: 10 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 69
+L + +A+ Y S ++ D+ IL +L FGL + D Y ++ P
Sbjct: 131 SLQICKAMAYLESIN-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP 189
Query: 70 -----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG 124
PE + R T S V+ F + ++LS P + +K+ + +++
Sbjct: 190 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP----FFWLENKDVIGVLEKGDRL 245
Query: 125 HFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 159
+ L L +RC + +RP LV SL
Sbjct: 246 PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 280
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 8 RVALY---LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY--- 61
R+ LY + + +EY S+ R ++ DL A IL + + + +++ FGL K K
Sbjct: 112 RLLLYSSQICKGMEYLGSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVV 170
Query: 62 ----STNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 96
+ + + PE + + +S V+SFG +L +L +
Sbjct: 171 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 10/155 (6%)
Query: 10 ALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP 69
+L + +A+ Y S ++ D+ IL +L FGL + D Y ++ P
Sbjct: 119 SLQICKAMAYLESIN-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP 177
Query: 70 -----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEG 124
PE + R T S V+ F + ++LS P + +K+ + +++
Sbjct: 178 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP----FFWLENKDVIGVLEKGDRL 233
Query: 125 HFSNDEGTELVRLASRCLQSEARERPNAKSLVISL 159
+ L L +RC + +RP LV SL
Sbjct: 234 PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 268
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 71/161 (44%), Gaps = 15/161 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN------SRDGKS 60
+++A +A + Y ++ + ++ DL A + +D ++ FG+ ++ R G
Sbjct: 126 IQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGK 184
Query: 61 YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ + PE ++ G T S V+SFG +L ++ + P L + +M+
Sbjct: 185 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ---GLSNEQVLRFVMEG 241
Query: 121 ALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 159
L N D EL+R+ C Q + RP+ ++ S+
Sbjct: 242 GLLDKPDNCPDMLLELMRM---CWQYNPKMRPSFLEIISSI 279
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 79/170 (46%), Gaps = 16/170 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
L +A ++ A+EY K ++ DL A L ++ +++ FGL + G +Y+
Sbjct: 115 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAPAG 172
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ +T PE + + + +S V++FG +L ++ + + P +DL + LL D
Sbjct: 173 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYE-LLEKDY 230
Query: 121 ALEGHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEV 168
+E EG ++ L C Q +RP+ + + ++ +E+ +
Sbjct: 231 RME----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 276
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 79/170 (46%), Gaps = 16/170 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
L +A ++ A+EY K ++ DL A L ++ +++ FGL + G +Y+
Sbjct: 116 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAPAG 173
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ +T PE + + + +S V++FG +L ++ + + P +DL + LL D
Sbjct: 174 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYE-LLEKDY 231
Query: 121 ALEGHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEV 168
+E EG ++ L C Q +RP+ + + ++ +E+ +
Sbjct: 232 RME----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 277
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 71/161 (44%), Gaps = 15/161 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKN------SRDGKS 60
+++A +A + Y ++ + ++ DL A + +D ++ FG+ ++ R G
Sbjct: 135 IQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGK 193
Query: 61 YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ + PE ++ G T S V+SFG +L ++ + P L + +M+
Sbjct: 194 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ---GLSNEQVLRFVMEG 250
Query: 121 ALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 159
L N D EL+R+ C Q + RP+ ++ S+
Sbjct: 251 GLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSI 288
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN-----L 65
+A ++Y ++ ++ DL A IL + + ++S FGL + D +Y+T+ +
Sbjct: 156 IAAGMKYLANM-NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPI 214
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGH 125
+T PE + + T S V+SFG ++ ++++ P + + + ++
Sbjct: 215 RWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWE----LSNHEVMKAINDGFRLP 270
Query: 126 FSNDEGTELVRLASRCLQSEARERPNAKSLV 156
D + + +L +C Q E RP +V
Sbjct: 271 TPMDCPSAIYQLMMQCWQQERARRPKFADIV 301
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNS------RDGKS 60
L +A +A + Y +S+ ++ DL L + ++ FG+ ++ R G
Sbjct: 136 LHIASQIASGMVYLASQ-HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGH 194
Query: 61 YSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 96
+ + PPE + + T ES V+SFG +L ++ +
Sbjct: 195 TMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 7 LRVALY-LAQALEYCSSKGRALYHDLNAYRILFDKDGNP-RLSSFGLMKNSRDGKSYSTN 64
+R +Y L +AL+YC SKG ++ D+ + ++ D RL +GL + + Y+
Sbjct: 139 IRFYMYELLKALDYCHSKG-IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVR 197
Query: 65 LA---FTPPEYMRTGRVTPESV-VYSFGTMLLDLL 95
+A F PE + ++ S+ ++S G ML ++
Sbjct: 198 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 232
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 10/95 (10%)
Query: 15 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA-------F 67
QAL + G ++ D+ I+ ++ FG+ + D + T A +
Sbjct: 144 QALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 202
Query: 68 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPP 102
PE R V S VYS G +L ++L+G+ PP
Sbjct: 203 LSPEQARGDSVDARSDVYSLGCVLYEVLTGE--PP 235
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 10/95 (10%)
Query: 15 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA-------F 67
QAL + G ++ D+ I+ ++ FG+ + D + T A +
Sbjct: 127 QALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 68 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPP 102
PE R V S VYS G +L ++L+G+ PP
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGE--PP 218
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 10/95 (10%)
Query: 15 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA-------F 67
QAL + G ++ D+ I+ ++ FG+ + D + T A +
Sbjct: 127 QALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 68 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPP 102
PE R V S VYS G +L ++L+G+ PP
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGE--PP 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 10/95 (10%)
Query: 15 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA-------F 67
QAL + G ++ D+ I+ ++ FG+ + D + T A +
Sbjct: 127 QALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 68 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPP 102
PE R V S VYS G +L ++L+G+ PP
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGE--PP 218
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 10/95 (10%)
Query: 15 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLA-------F 67
QAL + G ++ D+ I+ ++ FG+ + D + T A +
Sbjct: 127 QALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 68 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPP 102
PE R V S VYS G +L ++L+G+ PP
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGE--PP 218
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 71/161 (44%), Gaps = 15/161 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
+++A +A + Y ++ + ++ DL A + +D ++ FG+ ++ + Y
Sbjct: 128 IQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 186
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ + PE ++ G T S V+SFG +L ++ + P L + +M+
Sbjct: 187 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ---GLSNEQVLRFVMEG 243
Query: 121 ALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 159
L N D EL+R+ C Q + RP+ ++ S+
Sbjct: 244 GLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSI 281
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 10/95 (10%)
Query: 15 QALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRD-GKSYSTNLA------F 67
QAL + G ++ D+ IL ++ FG+ + D G S A +
Sbjct: 127 QALNFSHQNG-IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQY 185
Query: 68 TPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPP 102
PE R V S VYS G +L ++L+G+ PP
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGE--PP 218
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 71/161 (44%), Gaps = 15/161 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
+++A +A + Y ++ + ++ DL A + +D ++ FG+ ++ + Y
Sbjct: 131 IQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 189
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ + PE ++ G T S V+SFG +L ++ + P L + +M+
Sbjct: 190 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ---GLSNEQVLRFVMEG 246
Query: 121 ALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 159
L N D EL+R+ C Q + RP+ ++ S+
Sbjct: 247 GLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSI 284
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 71/161 (44%), Gaps = 15/161 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
+++A +A + Y ++ + ++ DL A + +D ++ FG+ ++ + Y
Sbjct: 134 IQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 192
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ + PE ++ G T S V+SFG +L ++ + P L + +M+
Sbjct: 193 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ---GLSNEQVLRFVMEG 249
Query: 121 ALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 159
L N D EL+R+ C Q + RP+ ++ S+
Sbjct: 250 GLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSI 287
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 71/161 (44%), Gaps = 15/161 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
+++A +A + Y ++ + ++ DL A + +D ++ FG+ ++ + Y
Sbjct: 135 IQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 193
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ + PE ++ G T S V+SFG +L ++ + P L + +M+
Sbjct: 194 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ---GLSNEQVLRFVMEG 250
Query: 121 ALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 159
L N D EL+R+ C Q + RP+ ++ S+
Sbjct: 251 GLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSI 288
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 71/161 (44%), Gaps = 15/161 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
+++A +A + Y ++ + ++ DL A + +D ++ FG+ ++ + Y
Sbjct: 134 IQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 192
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ + PE ++ G T S V+SFG +L ++ + P L + +M+
Sbjct: 193 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ---GLSNEQVLRFVMEG 249
Query: 121 ALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 159
L N D EL+R+ C Q + RP+ ++ S+
Sbjct: 250 GLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSI 287
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 71/161 (44%), Gaps = 15/161 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
+++A +A + Y ++ + ++ DL A + +D ++ FG+ ++ + Y
Sbjct: 132 IQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 190
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ + PE ++ G T S V+SFG +L ++ + P L + +M+
Sbjct: 191 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ---GLSNEQVLRFVMEG 247
Query: 121 ALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 159
L N D EL+R+ C Q + RP+ ++ S+
Sbjct: 248 GLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSI 285
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 71/161 (44%), Gaps = 15/161 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
+++A +A + Y ++ + ++ DL A + +D ++ FG+ ++ + Y
Sbjct: 141 IQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 199
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ + PE ++ G T S V+SFG +L ++ + P L + +M+
Sbjct: 200 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ---GLSNEQVLRFVMEG 256
Query: 121 ALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 159
L N D EL+R+ C Q + RP+ ++ S+
Sbjct: 257 GLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSI 294
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 18/167 (10%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-STNL 65
L A +A+ ++Y S K + ++ DL A IL ++ +++ FGL SR + Y +
Sbjct: 145 LHFAADVARGMDYLSQK-QFIHRDLAARNILVGENYVAKIADFGL---SRGQEVYVKKTM 200
Query: 66 AFTPPEYMRTGRV-----TPESVVYSFGTMLLDLLSGKHIPPSH--ALDLIRSKNFLLLM 118
P +M + T S V+S+G +L +++S P +L L
Sbjct: 201 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK----LPQ 256
Query: 119 DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 165
LE + D+ E+ L +C + + ERP+ +++SL + +E
Sbjct: 257 GYRLEKPLNCDD--EVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 18/167 (10%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-STNL 65
L A +A+ ++Y S K + ++ DL A IL ++ +++ FGL SR + Y +
Sbjct: 135 LHFAADVARGMDYLSQK-QFIHRDLAARNILVGENYVAKIADFGL---SRGQEVYVKKTM 190
Query: 66 AFTPPEYMRTGRV-----TPESVVYSFGTMLLDLLSGKHIPPSH--ALDLIRSKNFLLLM 118
P +M + T S V+S+G +L +++S P +L L
Sbjct: 191 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK----LPQ 246
Query: 119 DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 165
LE + D+ E+ L +C + + ERP+ +++SL + +E
Sbjct: 247 GYRLEKPLNCDD--EVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 291
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 71/161 (44%), Gaps = 15/161 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
+++A +A + Y ++ + ++ DL A + +D ++ FG+ ++ + Y
Sbjct: 141 IQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 199
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ + PE ++ G T S V+SFG +L ++ + P L + +M+
Sbjct: 200 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ---GLSNEQVLRFVMEG 256
Query: 121 ALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 159
L N D EL+R+ C Q + RP+ ++ S+
Sbjct: 257 GLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSI 294
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGK 59
L +A ++ A+EY K ++ DL A L ++ +++ FGL + + G
Sbjct: 115 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 173
Query: 60 SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD 119
+ + +T PE + + + +S V++FG +L ++ + + P +DL + LL D
Sbjct: 174 KFP--IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYE-LLEKD 229
Query: 120 SALEGHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEV 168
+E EG ++ L C Q +RP+ + + ++ +E+ +
Sbjct: 230 YRME----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 276
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 80/170 (47%), Gaps = 16/170 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
L +A ++ A+EY K ++ +L A L ++ +++ FGL + G +Y+ +
Sbjct: 318 LYMATQISSAMEYLEKK-NFIHRNLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 375
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ +T PE + + + +S V++FG +L ++ + + P +DL + LL D
Sbjct: 376 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYE-LLEKDY 433
Query: 121 ALEGHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEV 168
+E EG ++ L C Q +RP+ + + ++ +E+ +
Sbjct: 434 RME----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 479
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 71/161 (44%), Gaps = 15/161 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
+++A +A + Y ++ + ++ DL A + +D ++ FG+ ++ + Y
Sbjct: 163 IQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 221
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ + PE ++ G T S V+SFG +L ++ + P L + +M+
Sbjct: 222 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ---GLSNEQVLRFVMEG 278
Query: 121 ALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 159
L N D EL+R+ C Q + RP+ ++ S+
Sbjct: 279 GLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSI 316
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 80/170 (47%), Gaps = 16/170 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
L +A ++ A+EY K ++ +L A L ++ +++ FGL + G +Y+ +
Sbjct: 321 LYMATQISSAMEYLEKK-NFIHRNLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 378
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ +T PE + + + +S V++FG +L ++ + + P +DL + LL D
Sbjct: 379 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYE-LLEKDY 436
Query: 121 ALEGHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEV 168
+E EG ++ L C Q +RP+ + + ++ +E+ +
Sbjct: 437 RME----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 482
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST------NLA 66
+A +EY SS ++ DL +L N ++S GL + Y +
Sbjct: 154 IAAGMEYLSSH-HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIR 212
Query: 67 FTPPEYMRTGRVTPESVVYSFGTMLLDLLS 96
+ PE + G+ + +S ++S+G +L ++ S
Sbjct: 213 WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 80/170 (47%), Gaps = 16/170 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
L +A ++ A+EY K ++ +L A L ++ +++ FGL + G +Y+ +
Sbjct: 360 LYMATQISSAMEYLEKK-NFIHRNLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAG 417
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ +T PE + + + +S V++FG +L ++ + + P +DL + LL D
Sbjct: 418 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYE-LLEKDY 475
Query: 121 ALEGHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEV 168
+E EG ++ L C Q +RP+ + + ++ +E+ +
Sbjct: 476 RME----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 521
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST------NLA 66
+A +EY SS ++ DL +L N ++S GL + Y +
Sbjct: 137 IAAGMEYLSSH-HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIR 195
Query: 67 FTPPEYMRTGRVTPESVVYSFGTMLLDLLS 96
+ PE + G+ + +S ++S+G +L ++ S
Sbjct: 196 WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 79/179 (44%), Gaps = 26/179 (14%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
L +A ++ A+EY K ++ DL A L ++ +++ FGL + G +++ +
Sbjct: 112 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTFTAHAG 169
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-----PSHALDLIRSKNFL 115
+ +T PE + + + +S V++FG +L ++ + P PS +L+
Sbjct: 170 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK---- 225
Query: 116 LLMDSALEGHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYV 172
D +E EG ++ L C Q +RP+ + + ++ +E+ + V
Sbjct: 226 ---DYRME----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 277
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN-----L 65
+ ++Y S A++ DL A IL + + ++S FG+ + D +Y+T +
Sbjct: 140 IGSGMKYLSDMS-AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 198
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 96
+T PE + + T S V+S+G ++ +++S
Sbjct: 199 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 77/169 (45%), Gaps = 18/169 (10%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGK 59
L +A ++ A+EY K ++ DL A L ++ +++ FGL + + G
Sbjct: 119 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 177
Query: 60 SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMD 119
+ + +T PE + + + +S V++FG +L ++ + + P +DL + LL D
Sbjct: 178 KFP--IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYE-LLEKD 233
Query: 120 SALEGHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISLMSLQKEA 166
+E EG ++ L C Q +RP+ + + ++ +E+
Sbjct: 234 YRME----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 278
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 70/161 (43%), Gaps = 15/161 (9%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-- 64
+++A +A + Y ++ + ++ DL A +D ++ FG+ ++ + Y
Sbjct: 128 IQMAGEIADGMAYLNAN-KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGK 186
Query: 65 ----LAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDS 120
+ + PE ++ G T S V+SFG +L ++ + P L + +M+
Sbjct: 187 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ---GLSNEQVLRFVMEG 243
Query: 121 ALEGHFSN--DEGTELVRLASRCLQSEARERPNAKSLVISL 159
L N D EL+R+ C Q + RP+ ++ S+
Sbjct: 244 GLLDKPDNCPDMLLELMRM---CWQYNPKMRPSFLEIISSI 281
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Query: 25 RALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTN-----LAFTPPEYMRTGRVT 79
R ++ D+ IL D + ++ FG+ K + TN + + PE + G T
Sbjct: 131 RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAK-GEAT 189
Query: 80 PESV-VYSFGTMLLDLLSGKHIPP 102
E +YS G +L ++L G+ PP
Sbjct: 190 DECTDIYSIGIVLYEMLVGE--PP 211
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKS---YSTNLA------FTPPEYMRTGR 77
++ DL A IL + + ++S FGL + D S Y++ L +T PE ++ +
Sbjct: 157 VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRK 216
Query: 78 VTPESVVYSFGTMLLDLLS 96
T S V+S+G ++ +++S
Sbjct: 217 FTSASDVWSYGIVMWEVMS 235
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 76/176 (43%), Gaps = 28/176 (15%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGK 59
L +A ++ A+EY K ++ DL A L ++ +++ FGL + + G
Sbjct: 112 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 170
Query: 60 SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-----PSHALDLIRSKNF 114
+ + +T PE + + + +S V++FG +L ++ + P PS +L+
Sbjct: 171 KFP--IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK--- 225
Query: 115 LLLMDSALEGHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEV 168
D +E EG ++ L C Q +RP+ + + ++ +E+ +
Sbjct: 226 ----DYRME----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 273
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 77/180 (42%), Gaps = 28/180 (15%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMK-------NSRDGK 59
L +A ++ A+EY K ++ DL A L ++ +++ FGL + + G
Sbjct: 112 LYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 170
Query: 60 SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGKHIP-----PSHALDLIRSKNF 114
+ + +T PE + + + +S V++FG +L ++ + P PS +L+
Sbjct: 171 KFP--IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK--- 225
Query: 115 LLLMDSALEGHFSNDEGT--ELVRLASRCLQSEARERPNAKSLVISLMSLQKEAEVPSYV 172
D +E EG ++ L C Q +RP+ + + ++ +E+ + V
Sbjct: 226 ----DYRME----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 277
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN-----L 65
+ + Y S G ++ DL A +L D + ++S FGL + D +Y+T +
Sbjct: 160 VGAGMRYLSDLG-YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPI 218
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 96
+T PE + + S V+SFG ++ ++L+
Sbjct: 219 RWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ LA TP PE + +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LAGTPEYLAPEIILSKGYNKAV 219
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 220 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 18/167 (10%)
Query: 7 LRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSY-STNL 65
L A +A+ ++Y S K + ++ +L A IL ++ +++ FGL SR + Y +
Sbjct: 142 LHFAADVARGMDYLSQK-QFIHRNLAARNILVGENYVAKIADFGL---SRGQEVYVKKTM 197
Query: 66 AFTPPEYMRTGRV-----TPESVVYSFGTMLLDLLSGKHIPPSH--ALDLIRSKNFLLLM 118
P +M + T S V+S+G +L +++S P +L L
Sbjct: 198 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK----LPQ 253
Query: 119 DSALEGHFSNDEGTELVRLASRCLQSEARERPNAKSLVISLMSLQKE 165
LE + D+ E+ L +C + + ERP+ +++SL + +E
Sbjct: 254 GYRLEKPLNCDD--EVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 298
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 8 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFG------LMKNSRDGKSY 61
RV L L Y + + L+ D+ A +L +DG +L+ FG L KNS+ +
Sbjct: 129 RVMQMLLNGLYYIH-RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 62 S--TNLAFTPPEYM 73
+ L + PPE +
Sbjct: 188 NRVVTLWYRPPELL 201
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 8 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFG------LMKNSRDGKSY 61
RV L L Y + + L+ D+ A +L +DG +L+ FG L KNS+ +
Sbjct: 129 RVMQMLLNGLYYIH-RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 62 S--TNLAFTPPEYM 73
+ L + PPE +
Sbjct: 188 NRVVTLWYRPPELL 201
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN-----LAFTPPEYMRTGRVT 79
++ DL A IL + + ++S FG+ + D +Y+T + +T PE + + T
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFT 197
Query: 80 PESVVYSFGTMLLDLLS 96
S V+S+G ++ +++S
Sbjct: 198 SASDVWSYGIVMWEVMS 214
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 12/105 (11%)
Query: 2 KWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFG-LMKNSRDGKS 60
KWA + LA L+ S G ++ D+ +L DK G+ +L+ FG MK G
Sbjct: 174 KWAKFYTAEVVLA--LDAIHSMG-LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMV 230
Query: 61 YSTNLAFTP----PEYMRT----GRVTPESVVYSFGTMLLDLLSG 97
+ TP PE +++ G E +S G L ++L G
Sbjct: 231 HCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 8 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFG------LMKNSRDGKSY 61
RV L L Y + + L+ D+ A +L +DG +L+ FG L KNS+ +
Sbjct: 129 RVMQMLLNGLYYIH-RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 62 S--TNLAFTPPEYM 73
+ L + PPE +
Sbjct: 188 NRVVTLWYRPPELL 201
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 8 RVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFG------LMKNSRDGKSY 61
RV L L Y + + L+ D+ A +L +DG +L+ FG L KNS+ +
Sbjct: 128 RVMQMLLNGLYYIH-RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 186
Query: 62 S--TNLAFTPPEYM 73
+ L + PPE +
Sbjct: 187 NRVVTLWYRPPELL 200
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 45 RLSSFGLMKN-SRDGK-SYSTNLAFTPPEYMRTGRVTPESVVYSFGTMLLDLLSGK 98
+++ FGL + R K S + A+ PE +R + S V+S+G +L +LL+G+
Sbjct: 156 KITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDG--KSYSTN-----LAFTPPEYMRTGRVT 79
++ DL A IL + + ++S FG+ + D +Y+T + +T PE + + T
Sbjct: 132 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFT 191
Query: 80 PESVVYSFGTMLLDLLS 96
S V+S+G ++ +++S
Sbjct: 192 SASDVWSYGIVMWEVMS 208
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGL---MKNSRDGKSYSTN----L 65
+ + Y S G ++ DL A +L D + ++S FGL +++ D +T +
Sbjct: 160 VGAGMRYLSDLG-YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPI 218
Query: 66 AFTPPEYMRTGRVTPESVVYSFGTMLLDLLS 96
+T PE + + S V+SFG ++ ++L+
Sbjct: 219 RWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 20/92 (21%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMK-NSRDGKSYSTNLAFTPPEYMRTGRVTPESVVY 85
+Y DL ++ D +G+ +++ FG+ K + DG +T P+Y + PE + Y
Sbjct: 142 IYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG--VTTREFCGTPDY-----IAPEIIAY 194
Query: 86 ----------SFGTMLLDLLSGKHIPPSHALD 107
++G +L ++L+G+ PP D
Sbjct: 195 QPYGKSVDWWAYGVLLYEMLAGQ--PPFDGED 224
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL ++ D+ G +++ FGL K + G+++ L TP PE + +
Sbjct: 163 IYRDLKPENLMIDQQGYIKVTDFGLAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 219
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 220 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 219
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A + I+ ++ HFS+D
Sbjct: 220 DWWALGVLIYEMAAG--YPPFFADEPIQIYEKIVSGKVRFPSHFSSD 264
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 11/85 (12%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMK----NSRDGKSYSTNLA------FTPPEYMRTG 76
++ DL A IL + + ++S FGL + NS D +Y+++L +T PE +
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD-PTYTSSLGGKIPIRWTAPEAIAFR 196
Query: 77 RVTPESVVYSFGTMLLDLLSGKHIP 101
+ T S +S+G ++ +++S P
Sbjct: 197 KFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G++++ L TP PE + +
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWT--LCGTPEYLAPEIILSKGYNKAV 220
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 221 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 265
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL ++ D+ G +++ FGL K + G+++ L TP PE + +
Sbjct: 163 IYRDLKPENLMIDQQGYIQVTDFGLAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 219
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 220 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 164 IYRDLKPENLLIDQQGYIKVADFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 220
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 221 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 265
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 13/126 (10%)
Query: 11 LYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 67
Y AQ EY S +Y DL +L D+ G +++ FG K + G++++ L
Sbjct: 131 FYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWT--LCG 186
Query: 68 TP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE 123
TP PE + + ++ G ++ ++ +G PP A I+ ++
Sbjct: 187 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFP 244
Query: 124 GHFSND 129
HFS+D
Sbjct: 245 SHFSSD 250
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 163 IYRDLKPENLLIDQQGYIKVADFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 219
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 220 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 163 IYRDLKPENLLIDQQGYIKVADFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 219
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 220 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 12/105 (11%)
Query: 2 KWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFG-LMKNSRDGKS 60
KWA + LA L+ S G ++ D+ +L DK G+ +L+ FG MK +++G
Sbjct: 173 KWARFYTAEVVLA--LDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 229
Query: 61 YSTNLAFTP----PEYMRT----GRVTPESVVYSFGTMLLDLLSG 97
TP PE +++ G E +S G L ++L G
Sbjct: 230 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 12/105 (11%)
Query: 2 KWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFG-LMKNSRDGKS 60
KWA + LA L+ S G ++ D+ +L DK G+ +L+ FG MK +++G
Sbjct: 173 KWARFYTAEVVLA--LDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 229
Query: 61 YSTNLAFTP----PEYMRT----GRVTPESVVYSFGTMLLDLLSG 97
TP PE +++ G E +S G L ++L G
Sbjct: 230 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 12/105 (11%)
Query: 2 KWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFG-LMKNSRDGKS 60
KWA + LA L+ S G ++ D+ +L DK G+ +L+ FG MK +++G
Sbjct: 168 KWARFYTAEVVLA--LDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 224
Query: 61 YSTNLAFTP----PEYMRT----GRVTPESVVYSFGTMLLDLLSG 97
TP PE +++ G E +S G L ++L G
Sbjct: 225 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 163 IYRDLKPENLLIDQQGYIKVADFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 219
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 220 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 219
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 220 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 219
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 220 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEALAPEIILSKGYNKAV 219
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 220 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 219
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 220 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 219
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 220 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 219
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 220 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 219
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 220 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
>pdb|3LCA|A Chain A, Structure Of Tom71 Complexed With Hsp70 Ssa1 C Terminal
Tail Indicating Conformational Plasticity
Length = 533
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 239 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQV 298
K G+ F AK+F+ AI Y I+ P Y+ Y+ ++ + +A
Sbjct: 25 KNRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALE 83
Query: 299 VSPDWPTALYLQAACLFSLGMENDA 323
+ PD AL +A+ SLG DA
Sbjct: 84 IKPDHSKALLRRASANESLGNFTDA 108
>pdb|3FP2|A Chain A, Crystal Structure Of Tom71 Complexed With Hsp82 C-Terminal
Fragment
pdb|3FP3|A Chain A, Crystal Structure Of Tom71
pdb|3FP4|A Chain A, Crystal Structure Of Tom71 Complexed With Ssa1 C-Terminal
Fragment
Length = 537
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 239 KKHGDTAFRAKDFSTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQV 298
K G+ F AK+F+ AI Y I+ P Y+ Y+ ++ + +A
Sbjct: 29 KNRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALE 87
Query: 299 VSPDWPTALYLQAACLFSLGMENDA 323
+ PD AL +A+ SLG DA
Sbjct: 88 IKPDHSKALLRRASANESLGNFTDA 112
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 220
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 221 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 265
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 219
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 220 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 219
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 220 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 220
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 221 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 265
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 220
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 221 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 265
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 158 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 214
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 215 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 259
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 220
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 221 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 265
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 219
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 220 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 240
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 241 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 285
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 219
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 220 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 219
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 220 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 220
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 221 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 265
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 219
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 220 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 219
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 220 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 219
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 220 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 219
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 220 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 219
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 220 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 240
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 241 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 285
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 220
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 221 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 265
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 219
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 220 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 264
>pdb|1PX5|A Chain A, Crystal Structure Of The 2'-Specific And Double-Stranded
Rna-Activated Interferon-Induced Antiviral Protein
2'-5'- Oligoadenylate Synthetase
pdb|1PX5|B Chain B, Crystal Structure Of The 2'-Specific And Double-Stranded
Rna-Activated Interferon-Induced Antiviral Protein
2'-5'- Oligoadenylate Synthetase
Length = 349
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 142 LQSEARERPNAKSLVISLMSLQKEAE---VPSYVLLGIQHETAPSTKP 186
+QS RE P A S V+S LQ+E E +P++ LG + P KP
Sbjct: 120 VQSPRRENPRALSFVLSSPQLQQEVEFDVLPAFDALG---QWTPGYKP 164
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 11 LYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 67
Y AQ EY S +Y DL +L D+ G +++ FG K + G+++ L
Sbjct: 138 FYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCG 193
Query: 68 TP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE 123
TP PE + + ++ G ++ ++ +G PP A I+ ++
Sbjct: 194 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFP 251
Query: 124 GHFSND 129
HFS+D
Sbjct: 252 SHFSSD 257
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G+++ L TP PE + +
Sbjct: 156 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAV 212
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 213 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 257
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTGRVTPES 82
+Y DL +L D+ G +++ FG K + G +++ L TP PE + +
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GATWT--LCGTPEYLAPEIILSKGYNKAV 240
Query: 83 VVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFSND 129
++ G ++ ++ +G PP A I+ ++ HFS+D
Sbjct: 241 DWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSHFSSD 285
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 11 LYLAQ---ALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAF 67
Y AQ EY S +Y DL +L D+ G +++ FG K + G+++ L
Sbjct: 132 FYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDEQGYIQVTDFGFAKRVK-GRTWX--LCG 187
Query: 68 TP----PEYMRTGRVTPESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALE 123
TP PE + + ++ G ++ ++ +G PP A I+ ++
Sbjct: 188 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFP 245
Query: 124 GHFSND 129
HFS+D
Sbjct: 246 SHFSSD 251
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 59/143 (41%), Gaps = 25/143 (17%)
Query: 27 LYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFTP----PEYMRTG--RVTP 80
++ DL IL D + RLS FG + G+ L TP PE ++ P
Sbjct: 222 VHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR-ELCGTPGYLAPEILKCSMDETHP 280
Query: 81 ----ESVVYSFGTMLLDLLSGKHIPPSHALDLIRSKNFLLLMDSALEGHFS------NDE 130
E +++ G +L LL+G PP + +L++ +EG + +D
Sbjct: 281 GYGKEVDLWACGVILFTLLAGS--PP------FWHRRQILMLRMIMEGQYQFSSPEWDDR 332
Query: 131 GTELVRLASRCLQSEARERPNAK 153
+ + L SR LQ + R A+
Sbjct: 333 SSTVKDLISRLLQVDPEARLTAE 355
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 28.1 bits (61), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 13 LAQALEYCSSKGRALYHDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYST--NLAFTPP 70
+ + Y ++ + D+ IL DK+G +LS FG + D K + F PP
Sbjct: 160 VLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPP 219
Query: 71 EYM 73
E+
Sbjct: 220 EFF 222
>pdb|3NRC|A Chain A, Crystal Stucture Of The Francisella Tularensis Enoyl-Acyl
Carrier Protein Reductase (Fabi) In Complex With Nad+
And Triclosan
pdb|3NRC|B Chain B, Crystal Stucture Of The Francisella Tularensis Enoyl-Acyl
Carrier Protein Reductase (Fabi) In Complex With Nad+
And Triclosan
pdb|3UIC|A Chain A, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|B Chain B, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|C Chain C, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|D Chain D, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|E Chain E, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|F Chain F, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|G Chain G, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|H Chain H, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|I Chain I, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|J Chain J, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|K Chain K, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|L Chain L, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|M Chain M, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|N Chain N, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|O Chain O, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|P Chain P, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
Length = 280
Score = 27.7 bits (60), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 53/126 (42%), Gaps = 3/126 (2%)
Query: 142 LQSEARER-PNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPLSLTPLGEACSRLD 200
L E R N + +++L + E +PSY +G+ + +T + LGE +++
Sbjct: 146 LAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMGVAKASLEATVRYTALALGEDGIKVN 205
Query: 201 LTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDT-AFRAKDFSTAIDCYT 259
+ I + + L + S +++ ++ + G+T AF D +T I
Sbjct: 206 AVSAGPI-KTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDMATGITGEV 264
Query: 260 QFIDGG 265
+D G
Sbjct: 265 VHVDAG 270
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 27.7 bits (60), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 11 LYLAQALEYCSSKGRALY--HDLNAYRILFDKDGNPRLSSFGLMKNSRDGKSYSTNLAFT 68
YLA+ + S R Y D+ IL D+ G+ RL+ FG R + + +A
Sbjct: 166 FYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVG 225
Query: 69 PPEYM 73
P+Y+
Sbjct: 226 TPDYL 230
>pdb|2JJY|A Chain A, Crystal Structure Of Francisella Tularensis Enoyl
Reductase (Ftfabi) With Bound Nad
pdb|2JJY|B Chain B, Crystal Structure Of Francisella Tularensis Enoyl
Reductase (Ftfabi) With Bound Nad
pdb|2JJY|C Chain C, Crystal Structure Of Francisella Tularensis Enoyl
Reductase (Ftfabi) With Bound Nad
pdb|2JJY|D Chain D, Crystal Structure Of Francisella Tularensis Enoyl
Reductase (Ftfabi) With Bound Nad
Length = 268
Score = 27.7 bits (60), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 53/126 (42%), Gaps = 3/126 (2%)
Query: 142 LQSEARER-PNAKSLVISLMSLQKEAEVPSYVLLGIQHETAPSTKPLSLTPLGEACSRLD 200
L E R N + +++L + E +PSY +G+ + +T + LGE +++
Sbjct: 126 LAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMGVAKASLEATVRYTALALGEDGIKVN 185
Query: 201 LTAIHEILEGMGYKDDEGIANELSFQMWTSQMQETLNSKKHGDT-AFRAKDFSTAIDCYT 259
+ I + + L + S +++ ++ + G+T AF D +T I
Sbjct: 186 AVSAGPI-KTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDMATGITGEV 244
Query: 260 QFIDGG 265
+D G
Sbjct: 245 VHVDAG 250
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.132 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,912,595
Number of Sequences: 62578
Number of extensions: 397610
Number of successful extensions: 1278
Number of sequences better than 100.0: 395
Number of HSP's better than 100.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 314
Number of HSP's that attempted gapping in prelim test: 1147
Number of HSP's gapped (non-prelim): 397
length of query: 340
length of database: 14,973,337
effective HSP length: 99
effective length of query: 241
effective length of database: 8,778,115
effective search space: 2115525715
effective search space used: 2115525715
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)