Query 019476
Match_columns 340
No_of_seqs 343 out of 1744
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 16:41:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019476.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019476hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3h6l_A Histone-lysine N-methyl 100.0 1.1E-58 3.8E-63 436.8 16.9 236 26-261 17-265 (278)
2 3ooi_A Histone-lysine N-methyl 100.0 6.6E-57 2.2E-61 415.0 19.4 217 37-253 13-232 (232)
3 3ope_A Probable histone-lysine 100.0 5E-55 1.7E-59 400.1 22.2 212 43-257 2-218 (222)
4 1mvh_A Cryptic LOCI regulator 100.0 3.2E-50 1.1E-54 383.1 21.2 238 11-254 12-299 (299)
5 3bo5_A Histone-lysine N-methyl 100.0 1.1E-48 3.7E-53 371.1 20.3 232 20-255 16-288 (290)
6 2r3a_A Histone-lysine N-methyl 100.0 8.8E-49 3E-53 373.1 19.0 240 9-253 22-300 (300)
7 1ml9_A Histone H3 methyltransf 100.0 3.9E-49 1.3E-53 376.3 14.6 227 26-253 8-302 (302)
8 3hna_A Histone-lysine N-methyl 100.0 2.6E-49 8.8E-54 374.7 13.2 218 21-251 35-287 (287)
9 2w5y_A Histone-lysine N-methyl 100.0 7.3E-40 2.5E-44 293.1 11.4 151 102-253 40-192 (192)
10 3f9x_A Histone-lysine N-methyl 100.0 7.8E-35 2.7E-39 254.1 12.5 132 104-235 20-155 (166)
11 2f69_A Histone-lysine N-methyl 100.0 3.6E-29 1.2E-33 233.7 12.7 141 88-235 83-235 (261)
12 1n3j_A A612L, histone H3 lysin 100.0 3E-29 1E-33 207.6 7.7 110 113-237 3-112 (119)
13 3s8p_A Histone-lysine N-methyl 99.9 6.7E-29 2.3E-33 232.0 4.9 136 114-256 131-272 (273)
14 1h3i_A Histone H3 lysine 4 spe 99.9 3.9E-27 1.3E-31 223.2 11.4 117 113-235 162-289 (293)
15 2qpw_A PR domain zinc finger p 99.9 3.6E-27 1.2E-31 202.7 8.0 111 111-236 26-147 (149)
16 3rq4_A Histone-lysine N-methyl 99.9 1.6E-25 5.5E-30 206.8 6.2 125 122-254 116-241 (247)
17 3ep0_A PR domain zinc finger p 99.8 4E-20 1.4E-24 161.9 10.4 111 113-235 26-148 (170)
18 3db5_A PR domain zinc finger p 99.8 2.4E-19 8.2E-24 154.3 9.7 112 114-235 23-144 (151)
19 3dal_A PR domain zinc finger p 99.7 1.3E-18 4.4E-23 155.4 7.5 109 114-234 58-177 (196)
20 3ray_A PR domain-containing pr 99.7 3.5E-17 1.2E-21 149.4 6.3 131 114-261 72-212 (237)
21 3ihx_A PR domain zinc finger p 99.6 1.3E-15 4.6E-20 130.9 3.9 102 115-234 24-142 (152)
22 3n71_A Histone lysine methyltr 99.2 4E-11 1.4E-15 120.9 12.3 60 187-250 200-281 (490)
23 3qww_A SET and MYND domain-con 99.1 4.2E-10 1.4E-14 111.8 12.0 54 187-244 201-265 (433)
24 3qwp_A SET and MYND domain-con 98.8 1.5E-09 5.1E-14 107.6 4.5 47 186-236 200-246 (429)
25 3qxy_A N-lysine methyltransfer 97.0 0.00038 1.3E-08 69.2 4.3 42 187-232 222-263 (449)
26 2h21_A Ribulose-1,5 bisphospha 96.9 0.00043 1.5E-08 68.3 3.8 47 187-233 189-242 (440)
27 3smt_A Histone-lysine N-methyl 96.3 0.0022 7.6E-08 64.5 4.2 43 187-232 272-314 (497)
28 3qwp_A SET and MYND domain-con 86.6 0.57 1.9E-05 45.7 4.6 35 113-147 4-38 (429)
29 3smt_A Histone-lysine N-methyl 76.5 1.8 6.1E-05 43.2 3.9 31 115-145 94-124 (497)
30 3qxy_A N-lysine methyltransfer 65.7 3.8 0.00013 40.2 3.5 32 115-146 39-71 (449)
31 1wvo_A Sialic acid synthase; a 51.8 5.4 0.00018 29.6 1.4 18 212-229 7-24 (79)
32 3bw1_A SMX4 protein, U6 snRNA- 49.9 6.2 0.00021 30.3 1.5 38 288-325 7-44 (96)
33 2h21_A Ribulose-1,5 bisphospha 48.8 11 0.00039 36.4 3.6 24 123-146 31-54 (440)
34 4emg_A Probable U6 snRNA-assoc 44.9 9.8 0.00034 29.0 1.9 37 289-325 7-43 (93)
35 1n9r_A SMF, small nuclear ribo 42.6 15 0.00053 27.9 2.7 35 291-325 21-56 (93)
36 1mgq_A SM-like protein; LSM, R 41.2 14 0.00049 27.3 2.3 38 289-326 13-50 (83)
37 1ljo_A Archaeal SM-like protei 39.2 11 0.00037 27.4 1.3 37 289-325 3-40 (77)
38 1i4k_A Putative snRNP SM-like 36.1 21 0.00071 25.8 2.4 34 292-325 5-38 (77)
39 1t2y_A Metallothionein, MT; pr 35.5 21 0.00071 20.8 1.8 17 68-86 3-19 (26)
40 4emk_A U6 snRNA-associated SM- 33.7 12 0.00041 28.7 0.8 36 290-325 19-54 (94)
41 1i8f_A Putative snRNP SM-like 32.6 12 0.00042 27.5 0.7 36 290-325 10-45 (81)
42 2lua_A Protein MALE-specific l 32.0 31 0.0011 23.4 2.5 40 65-106 4-46 (52)
43 1d3b_B Protein (small nuclear 30.2 34 0.0012 25.5 2.9 33 294-326 7-39 (91)
44 1h64_1 SnRNP SM-like protein; 29.7 29 0.00098 24.9 2.3 33 293-325 6-38 (75)
45 4emk_B U6 snRNA-associated SM- 28.6 33 0.0011 24.6 2.5 31 295-325 8-38 (75)
46 3k3s_A Altronate hydrolase; st 26.6 36 0.0012 26.7 2.4 16 214-229 34-49 (105)
47 4emh_A Probable U6 snRNA-assoc 26.4 40 0.0014 26.2 2.7 34 292-325 17-50 (105)
48 1n3j_A A612L, histone H3 lysin 26.3 27 0.00094 27.2 1.8 20 211-231 15-34 (119)
49 2fwk_A U6 snRNA-associated SM- 25.9 16 0.00053 29.2 0.2 38 288-325 25-62 (121)
50 3s6n_F Small nuclear ribonucle 25.7 31 0.0011 25.7 1.9 34 292-325 7-40 (86)
51 1th7_A SnRNP-2, small nuclear 25.4 29 0.00099 25.4 1.6 33 293-325 11-43 (81)
52 4emk_C U6 snRNA-associated SM- 24.7 45 0.0015 26.2 2.7 33 293-325 25-57 (113)
53 3s6n_G Small nuclear ribonucle 24.1 45 0.0016 24.0 2.5 32 294-325 7-38 (76)
54 1b34_A Protein (small nuclear 22.9 29 0.00098 27.6 1.3 34 293-326 4-37 (119)
55 2m0o_A PHD finger protein 1; t 22.5 79 0.0027 23.3 3.4 39 297-335 26-64 (79)
56 4hcz_A PHD finger protein 1; p 21.7 97 0.0033 21.5 3.6 35 301-335 7-41 (58)
57 3qii_A PHD finger protein 20; 20.1 1E+02 0.0035 23.1 3.7 49 284-334 8-57 (85)
No 1
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=100.00 E-value=1.1e-58 Score=436.76 Aligned_cols=236 Identities=36% Similarity=0.691 Sum_probs=200.3
Q ss_pred CCeeEeCCCCCC-----CCCCCCcEEccceeeccccccccC--CCCCCcccccCCC-----CCCCCCCCCCCccceeeeC
Q 019476 26 NPVEFELPDWFI-----KPKAIPYVFIKRNIYLTKRIKRRL--EDDGIFCSCTASP-----GSSGVCDRDCHCGMLLSSC 93 (340)
Q Consensus 26 ~~~~~~lp~~~~-----~~~p~~f~~I~~n~~~~~~~~~~~--~~~~~~C~C~~~~-----~~~~~C~~~C~c~~~~~eC 93 (340)
.+.+|++|..+. ...||.|++|++|+|+.++.+... +.+.+.|+|.+.. .+...|+.+|+|+++++||
T Consensus 17 ~~~~f~~~~~~~~~~~~~~~p~~~~~i~~n~y~~~~~~~~~~~~~~~~~C~C~~~~~~~~~~~~~~C~~~C~nr~~~~EC 96 (278)
T 3h6l_A 17 VMDDFRDPQRWKECAKQGKMPCYFDLIEENVYLTERKKNKSHRDIKRMQCECTPLSKDERAQGEIACGEDCLNRLLMIEC 96 (278)
T ss_dssp EGGGGGCHHHHHHHHHTTSSCCCCEECSSCEECC--------------CCCCCCCCHHHHHHTCCSSCTTCTTGGGTBCC
T ss_pred ChhhcCCcHHHHHHHhcccCCCCceEeeeeeccccccccccccccccceeeccCCCcccccccCCCCCCCCCCcceEecc
Confidence 455677765542 457999999999999976533322 2346789999854 2356899999999999999
Q ss_pred CCCCCCCCCCCCccCccCCcccEEEEEecCCCcEEEeccccCCCceEEEEeeEEechhhHHHHHHHhhhcCCCceEEeee
Q 019476 94 SSGCKCGNSCLNKPFQNRPVKKMKLVQTEKCGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLGETNFYLCEI 173 (340)
Q Consensus 94 ~~~C~C~~~C~Nr~~q~~~~~~l~i~~t~~kG~GlfA~~~I~~G~~I~ey~Geii~~~e~~~r~~~~~~~~~~~~y~~~l 173 (340)
++.|+|+..|+||++|++...+++|++++++||||||+++|++|+||+||+||||+..++++|...+......++|++.+
T Consensus 97 ~~~C~C~~~C~Nr~~q~g~~~~leV~~t~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~y~~~~~~~~y~~~l 176 (278)
T 3h6l_A 97 SSRCPNGDYCSNRRFQRKQHADVEVILTEKKGWGLRAAKDLPSNTFVLEYCGEVLDHKEFKARVKEYARNKNIHYYFMAL 176 (278)
T ss_dssp CTTCTTGGGCSSCTTTTTCCCCEEEEECSSSCEEEEESSCBCTTCEEEECCCEEECHHHHHHHHHHHHHTTCCCCCEEEE
T ss_pred CCCCCcCCCCCCccccCCCccCEEEEEcCCCceEEEeCCccCCCCEeEEeeeeecCHHHHHHHHHHHHhccCccceeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999988877766778899999
Q ss_pred ccceEEeecccCCccccccCCCCCCcceeEEEECCeEEEEEEEcCCCCCCCeEEEecCCCcCCC-CceeecCCCCCcccc
Q 019476 174 NRDMVIDATYKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQFGA-DQDCHCGAAGCRRKL 252 (340)
Q Consensus 174 ~~~~~IDa~~~Gn~aRfINHSC~PN~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~~~~-~~~C~Cgs~~Crg~l 252 (340)
+.+++|||+.+||++|||||||+|||.++.|.+++.++++|||+|||++||||||||++..++. .+.|+||+++|||+|
T Consensus 177 ~~~~~IDa~~~GN~aRFiNHSC~PN~~~~~~~v~g~~ri~~fA~RdI~~GEELT~dY~~~~~~~~~~~C~CGs~~Crg~l 256 (278)
T 3h6l_A 177 KNDEIIDATQKGNCSRFMNHSCEPNCETQKWTVNGQLRVGFFTTKLVPSGSELTFDYQFQRYGKEAQKCFCGSANCRGYL 256 (278)
T ss_dssp ETTEEEECSSEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTTEECSSCEECCCCCTTCCSEE
T ss_pred cCCeEEeCcccCChhhhcccCCCCCceeEEEEeCCceEEEEEECCccCCCCEEEEecCCCcCCCCCcEeECCCCCCeeec
Confidence 9999999999999999999999999999999999999999999999999999999999988764 589999999999999
Q ss_pred CCCCCCCCC
Q 019476 253 GAKPSKPKI 261 (340)
Q Consensus 253 ~~~~~~~~~ 261 (340)
+++...+..
T Consensus 257 ~~~~~~~~~ 265 (278)
T 3h6l_A 257 GGENRVSIR 265 (278)
T ss_dssp CCC------
T ss_pred CCCCcCCcc
Confidence 987654433
No 2
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=100.00 E-value=6.6e-57 Score=415.03 Aligned_cols=217 Identities=38% Similarity=0.698 Sum_probs=196.8
Q ss_pred CCCCCCCcEEccceeecccccc-ccCCCCCCcccccCCCCCCCCCCCCCCccceeeeCCC-CCCCCCCCCCccCccCCcc
Q 019476 37 IKPKAIPYVFIKRNIYLTKRIK-RRLEDDGIFCSCTASPGSSGVCDRDCHCGMLLSSCSS-GCKCGNSCLNKPFQNRPVK 114 (340)
Q Consensus 37 ~~~~p~~f~~I~~n~~~~~~~~-~~~~~~~~~C~C~~~~~~~~~C~~~C~c~~~~~eC~~-~C~C~~~C~Nr~~q~~~~~ 114 (340)
...+||+|++|++|+++..... ....++...|+|++.+.+.++|+.+|+|+++++||++ .|+|+..|+||++|++...
T Consensus 13 ~~~~pp~y~~i~~n~~~~~~~~~~~~~~~~~~C~C~~~~~~~C~~~~~C~nr~~~~EC~~~~C~c~~~C~Nr~~q~~~~~ 92 (232)
T 3ooi_A 13 NDKKPPPYKHIKVNRPIGRVQIFTADLSEIPRCNCKATDENPCGIDSECINRMLLYECHPTVCPAGGRCQNQCFSKRQYP 92 (232)
T ss_dssp HCCSCCCCEECSSCEECTTCCCCCCCGGGSCCCSCCTTSSSTTCTTSCCHHHHTTBCCCTTTCTTGGGCCCCHHHHTCCC
T ss_pred cCCCCCCceEeeccccccccccccCCcccCCcccccCCCCCCCCCCCCCcCcCceeEeCCCCCCCCCCcCCccccCCCCc
Confidence 3588999999999999876332 2334566789999876655556688999999999998 6999999999999999999
Q ss_pred cEEEEEecCCCcEEEeccccCCCceEEEEeeEEechhhHHHHHHHhhhcCCCceEEeeeccceEEeecccCCccccccCC
Q 019476 115 KMKLVQTEKCGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLGETNFYLCEINRDMVIDATYKGNKSRYINHS 194 (340)
Q Consensus 115 ~l~i~~t~~kG~GlfA~~~I~~G~~I~ey~Geii~~~e~~~r~~~~~~~~~~~~y~~~l~~~~~IDa~~~Gn~aRfINHS 194 (340)
+++|++++++||||||+++|++|++|+||+|++++.+++++|..........++|++.++.+++|||+..||++||||||
T Consensus 93 ~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~~y~~~l~~~~~IDa~~~Gn~aRfiNHS 172 (232)
T 3ooi_A 93 EVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIRYAQEHDITNFYMLTLDKDRIIDAGPKGNYARFMNHC 172 (232)
T ss_dssp CEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHHHHHHTTCCCCCEEEEETTEEEEEEEEECGGGGCEEC
T ss_pred cEEEEEcCCceeEEEECceecCCceeeEeeeeccCHHHHHHHHHHHhhcCCCceeeeecCcceEEecccccccccccccc
Confidence 99999999999999999999999999999999999999999877666666778899999999999999999999999999
Q ss_pred CCCCcceeEEEECCeEEEEEEEcCCCCCCCeEEEecCCCcCCC-CceeecCCCCCccccC
Q 019476 195 CCPNTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQFGA-DQDCHCGAAGCRRKLG 253 (340)
Q Consensus 195 C~PN~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~~~~-~~~C~Cgs~~Crg~l~ 253 (340)
|+||+.++.|.+++..+++|||+|||++||||||||++.+++. .+.|+|||++|||+||
T Consensus 173 C~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~~~~~~C~CGs~~CrG~lG 232 (232)
T 3ooi_A 173 CQPNCETQKWSVNGDTRVGLFALSDIKAGTELTFNYNLECLGNGKTVCKCGAPNCSGFLG 232 (232)
T ss_dssp SSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTCSTTCTTCBCCCCCTTCCSBCC
T ss_pred CCCCeEEEEEEECCceEEEEEECCccCCCCEEEEECCCCcCCCCCcEeECCCCcCcCcCC
Confidence 9999999999999999999999999999999999999988765 5999999999999997
No 3
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=100.00 E-value=5e-55 Score=400.06 Aligned_cols=212 Identities=36% Similarity=0.740 Sum_probs=186.9
Q ss_pred CcEEccceeeccccccccCCCCCCcccccCCCC-CCCCCCCCCCccceeeeCCC-CCCCCCCCCCccCccCCcc-cEEEE
Q 019476 43 PYVFIKRNIYLTKRIKRRLEDDGIFCSCTASPG-SSGVCDRDCHCGMLLSSCSS-GCKCGNSCLNKPFQNRPVK-KMKLV 119 (340)
Q Consensus 43 ~f~~I~~n~~~~~~~~~~~~~~~~~C~C~~~~~-~~~~C~~~C~c~~~~~eC~~-~C~C~~~C~Nr~~q~~~~~-~l~i~ 119 (340)
.|++|++|+|+..+. ....+...|+|++... .+.+|+++|+||++++||++ .|+|+..|.||++|++... +++|+
T Consensus 2 ~~~~i~~n~~~~~~~--~~~~~~~~C~C~~~~~~~~~~c~~~C~nr~~~~EC~~~~C~C~~~C~Nr~~q~~~~~~~lev~ 79 (222)
T 3ope_A 2 SYKKIRSNVYVDVKP--LSGYEATTCNCKKPDDDTRKGCVDDCLNRMIFAECSPNTCPCGEQCCNQRIQRHEWVQCLERF 79 (222)
T ss_dssp CCEECSSCEECSCCC--BCCCCCCCCCCCCCSCSSSCSSCSCCTTGGGTBCCCTTTCTTTTSCSSCTTTTTCCCSCCEEE
T ss_pred CccCcccceeeeecc--CccccCccccCcCCCcCCCCCCcccCcCcCeEeEeCCCCCcCCCCCCCceEeCCCccccEEEE
Confidence 699999999998654 3446678999997643 34689999999999999998 7999999999999998765 59999
Q ss_pred EecCCCcEEEeccccCCCceEEEEeeEEechhhHHHHHHHhhhcCCCceEEeeeccceEEeecccCCccccccCCCCCCc
Q 019476 120 QTEKCGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLGETNFYLCEINRDMVIDATYKGNKSRYINHSCCPNT 199 (340)
Q Consensus 120 ~t~~kG~GlfA~~~I~~G~~I~ey~Geii~~~e~~~r~~~~~~~~~~~~y~~~l~~~~~IDa~~~Gn~aRfINHSC~PN~ 199 (340)
+++++||||||+++|++|++|+||+||+++.+++.+|...... ...+.|++.++.+++|||+.+||++|||||||+||+
T Consensus 80 ~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~-~~~~~y~~~l~~~~~IDa~~~Gn~aRfiNHSC~PN~ 158 (222)
T 3ope_A 80 RAEEKGWGIRTKEPLKAGQFIIEYLGEVVSEQEFRNRMIEQYH-NHSDHYCLNLDSGMVIDSYRMGNEARFINHSCDPNC 158 (222)
T ss_dssp ECTTSSEEEECSSCBCTTCEEEECCSEEECHHHHHHHHHHTST-TCCSCCEEEEETTEEEECSSEECGGGGCEECSSCSE
T ss_pred EcCCCceEEEECceECCCCEEEEecceecCHHHHHHHHHHHhc-ccCCeEEEecCCCEEEeCccccccceeeccCCCCCe
Confidence 9999999999999999999999999999999999888654332 234579999999999999999999999999999999
Q ss_pred ceeEEEECCeEEEEEEEcCCCCCCCeEEEecCCCcCCC--CceeecCCCCCccccCCCCC
Q 019476 200 EMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQFGA--DQDCHCGAAGCRRKLGAKPS 257 (340)
Q Consensus 200 ~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~~~~--~~~C~Cgs~~Crg~l~~~~~ 257 (340)
.++.|.+++.++++|||+|||++||||||||++..|+. .+.|+|||++|||+|++++.
T Consensus 159 ~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~~~~~~~C~CGs~~Crg~i~~~~q 218 (222)
T 3ope_A 159 EMQKWSVNGVYRIGLYALKDMPAGTELTYDYNFHSFNVEKQQLCKCGFEKCRGIIGGKSQ 218 (222)
T ss_dssp EEEEEEETTEEEEEEEESSCBCTTCBCEECTTSSBCCCSCCCBCCCCCTTCCSBCC----
T ss_pred EeEEEEECCeEEEEEEECCccCCCCEEEEECCCcccCCcCCCEeeCCCcCCCCccCCCCc
Confidence 99999999999999999999999999999999988764 58999999999999998764
No 4
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=100.00 E-value=3.2e-50 Score=383.08 Aligned_cols=238 Identities=25% Similarity=0.416 Sum_probs=174.7
Q ss_pred hhHHHHHHHHHHhhCCCeeEeCCCCCCCCCCC--CcEEccceeeccccccccCCCCCCcccccC--CCCCCCCCCCCCCc
Q 019476 11 SRIGHAFNKLLKQIGNPVEFELPDWFIKPKAI--PYVFIKRNIYLTKRIKRRLEDDGIFCSCTA--SPGSSGVCDRDCHC 86 (340)
Q Consensus 11 ~~~~~~~~~l~~~~~~~~~~~lp~~~~~~~p~--~f~~I~~n~~~~~~~~~~~~~~~~~C~C~~--~~~~~~~C~~~C~c 86 (340)
...+.+|++.++.+ |.+++.+-+.++..+|| .|+||.++++..... .........|+|.+ +|... ...+|.|
T Consensus 12 ~~~~~~~~~~~~g~-e~~pi~~~N~vd~~~~p~~~F~Yi~~~~~~~~~~-~~~~~~~~gC~C~~~~~C~~~--~~~~C~C 87 (299)
T 1mvh_A 12 YEKRELFRKKLREI-EGPEVTLVNEVDDEPCPSLDFQFISQYRLTQGVI-PPDPNFQSGCNCSSLGGCDLN--NPSRCEC 87 (299)
T ss_dssp HHHHHHHHHHHHTS-SSSCEEEECSSCCCCCSCCCSEECSSCEECTTCC-CCCGGGCCCCCCCCSSSSCTT--CTTTCSS
T ss_pred hHHHHHHHHHHcCc-CCCCEEEEeCCCCCCCCCCCcEEccceecCCCcC-cCCCcCCCCCcCcCCCCcCCC--CCCCCcc
Confidence 34577888888876 56677765666555544 599999999865432 22223347899996 33320 0013333
Q ss_pred c----------------------ceeeeCCCCCCCCCCCCCccCccCCcccEEEEEecCCCcEEEeccccCCCceEEEEe
Q 019476 87 G----------------------MLLSSCSSGCKCGNSCLNKPFQNRPVKKMKLVQTEKCGAGIVADEDIKRGEFVIEYV 144 (340)
Q Consensus 87 ~----------------------~~~~eC~~~C~C~~~C~Nr~~q~~~~~~l~i~~t~~kG~GlfA~~~I~~G~~I~ey~ 144 (340)
. .+++||++.|+|+..|+||++|++...+++|++++.+||||||+++|++|+||+||+
T Consensus 88 ~~~~~~~~~~~y~~~g~l~~~~~~~i~EC~~~C~C~~~C~Nr~~q~g~~~~l~v~~t~~~G~Gv~A~~~I~kG~~I~EY~ 167 (299)
T 1mvh_A 88 LDDLDEPTHFAYDAQGRVRADTGAVIYECNSFCSCSMECPNRVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYL 167 (299)
T ss_dssp STTCCSSCCCSBCTTSSBCTTCCSEEECCCTTSCSCTTCTTCTGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECC
T ss_pred ccccccccccccCCCCceeecCCCCeEeCCCCCCCCCCcCCccccccccccEEEEEcCCCcceEeeCceeCCCCEEEEee
Confidence 2 247999999999999999999999999999999999999999999999999999999
Q ss_pred eEEechhhHHHHHHHhhhcCCCceEEeeecc-----ceEEeecccCCccccccCCCCCCcceeEEEEC----CeEEEEEE
Q 019476 145 GEVIDDQTCEERLWKMKHLGETNFYLCEINR-----DMVIDATYKGNKSRYINHSCCPNTEMQKWIID----GETRIGIF 215 (340)
Q Consensus 145 Geii~~~e~~~r~~~~~~~~~~~~y~~~l~~-----~~~IDa~~~Gn~aRfINHSC~PN~~~~~~~~~----g~~ri~i~ 215 (340)
|||++.+++++|...+.. ....|+|.++. .++|||+.+||++|||||||+||+.++.++.+ +.++++||
T Consensus 168 Gevi~~~ea~~R~~~y~~--~~~~Y~f~l~~~~~~~~~~IDa~~~GN~aRfiNHSC~PN~~~~~v~~~~~~~~~~~i~~~ 245 (299)
T 1mvh_A 168 GEVITSAEAAKRDKNYDD--DGITYLFDLDMFDDASEYTVDAQNYGDVSRFFNHSCSPNIAIYSAVRNHGFRTIYDLAFF 245 (299)
T ss_dssp CEEEEHHHHHHHHTTCCS--CSCCCEEEECSSCSSSCEEEECSSEECGGGGCEECSSCSEEEEEEESCTTCTTSCEEEEE
T ss_pred eEECcHHHHHHHHHhhhc--cCceEEEEecCCCCCccEEEeCcccCChhheEeecCCCCeEEEEEEeecCCCCceEEEEE
Confidence 999999999888654432 23568888874 68999999999999999999999998766654 35799999
Q ss_pred EcCCCCCCCeEEEecCCCcCC--------------C-CceeecCCCCCccccCC
Q 019476 216 ATRDIKKGENLTYDYQFVQFG--------------A-DQDCHCGAAGCRRKLGA 254 (340)
Q Consensus 216 A~RdI~~GEELT~dY~~~~~~--------------~-~~~C~Cgs~~Crg~l~~ 254 (340)
|+|||++||||||||++.++. . .+.|+|||++|||+|++
T Consensus 246 A~rdI~~GEELt~dY~~~~~~~~~~~~~~~~~~~~k~~~~C~CGs~~Crg~l~g 299 (299)
T 1mvh_A 246 AIKDIQPLEELTFDYAGAKDFSPVQSQKSQQNRISKLRRQCKCGSANCRGWLFG 299 (299)
T ss_dssp ESSCBCTTCBCEECCCTTSSSSCCC-----------------------------
T ss_pred EccCcCCCCEEEEEcCCcccccccccccccccccccCCcCcCCCCCCCccccCC
Confidence 999999999999999988771 1 26999999999999864
No 5
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=100.00 E-value=1.1e-48 Score=371.09 Aligned_cols=232 Identities=25% Similarity=0.400 Sum_probs=180.5
Q ss_pred HHHhhCCCeeEeCCCCCCCCCCCCcEEccceeeccccccccCCCCCCcccccCC-CC-CCCCCC--------CCCC----
Q 019476 20 LLKQIGNPVEFELPDWFIKPKAIPYVFIKRNIYLTKRIKRRLEDDGIFCSCTAS-PG-SSGVCD--------RDCH---- 85 (340)
Q Consensus 20 l~~~~~~~~~~~lp~~~~~~~p~~f~~I~~n~~~~~~~~~~~~~~~~~C~C~~~-~~-~~~~C~--------~~C~---- 85 (340)
.++...|.+++.+-+ ....|+.|+||.++++..............+|+|..+ |. ..+.|. ..|.
T Consensus 16 Dis~G~E~~pi~~~n--~~~~p~~f~Y~~~~~~~~~~~~~~~~~~~~gC~C~~~~C~~~~C~C~~~~~~y~~~~~l~~~~ 93 (290)
T 3bo5_A 16 DVACGQENLPVGAWP--PGAAPAPFQYTPDHVVGPGADIDPTQITFPGCICVKTPCLPGTCSCLRHGENYDDNSCLRDIG 93 (290)
T ss_dssp CTTTTCSSSCCEEES--TTCCCCCCEECSSCEECTTCSSCTTSCCCCCCCCCSSCCCTTTCGGGTTSCSBCTTSCBCC--
T ss_pred hhhCCCCCCceeeEC--CCCCCCCcEEeeceecCCCCcCCcccccCCCCCCCCCCcCCCCCcchhhcCccCccccccccc
Confidence 344444555554423 2567899999999988554322222223468999863 32 122331 1122
Q ss_pred ----ccceeeeCCCCCCCCCCCCCccCccCCcccEEEEEecCCCcEEEeccccCCCceEEEEeeEEechhhHHHHHHHhh
Q 019476 86 ----CGMLLSSCSSGCKCGNSCLNKPFQNRPVKKMKLVQTEKCGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMK 161 (340)
Q Consensus 86 ----c~~~~~eC~~~C~C~~~C~Nr~~q~~~~~~l~i~~t~~kG~GlfA~~~I~~G~~I~ey~Geii~~~e~~~r~~~~~ 161 (340)
++.+++||++.|+|+..|+||++|++...+|+|++++.+||||||+++|++|+||+||+||||+.+++++|...+.
T Consensus 94 ~~~~~~~~~~EC~~~C~C~~~C~Nr~~q~g~~~~l~V~~s~~~G~Gl~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~~~ 173 (290)
T 3bo5_A 94 SGGKYAEPVFECNVLCRCSDHCRNRVVQKGLQFHFQVFKTHKKGWGLRTLEFIPKGRFVCEYAGEVLGFSEVQRRIHLQT 173 (290)
T ss_dssp ---CCCCCEECCCTTCCSCTTCTTCCGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHTTCC
T ss_pred cccccCCceEeCCCCCCCCCCCCCeEcccCCcccEEEEEcCCCcceEeECCccCCCCEEEEEeeEEeCHHHHHHHHHhhc
Confidence 2346899999999999999999999999999999999999999999999999999999999999999988764322
Q ss_pred hcCCCceEEeeecc--------ceEEeecccCCccccccCCCCCCcceeEEEECC-eEEEEEEEcCCCCCCCeEEEecCC
Q 019476 162 HLGETNFYLCEINR--------DMVIDATYKGNKSRYINHSCCPNTEMQKWIIDG-ETRIGIFATRDIKKGENLTYDYQF 232 (340)
Q Consensus 162 ~~~~~~~y~~~l~~--------~~~IDa~~~Gn~aRfINHSC~PN~~~~~~~~~g-~~ri~i~A~RdI~~GEELT~dY~~ 232 (340)
.....|+|.+.. .++|||+.+||++|||||||+||+.++.|.+++ .++++|||+|||++||||||||+.
T Consensus 174 --~~~~~Y~~~l~~~~~~~~~~~~~IDa~~~GN~arfiNHSC~PN~~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~ 251 (290)
T 3bo5_A 174 --KSDSNYIIAIREHVYNGQVMETFVDPTYIGNIGRFLNHSCEPNLLMIPVRIDSMVPKLALFAAKDIVPEEELSYDYSG 251 (290)
T ss_dssp --SSCCCCCEEEEECC-----EEEEEEEEEEECGGGGCEECSSCSEEEEEEESSSSSCEEEEEESSCBCTTCEEEECTTS
T ss_pred --ccCCcceeeecccccCCccceeEEeeeecCCchheeeecCCCCEEEEEEEeCCCceEEEEEEccccCCCCEEEEECCC
Confidence 123457776642 468999999999999999999999998888776 589999999999999999999998
Q ss_pred CcCC--------------CCceeecCCCCCccccCCC
Q 019476 233 VQFG--------------ADQDCHCGAAGCRRKLGAK 255 (340)
Q Consensus 233 ~~~~--------------~~~~C~Cgs~~Crg~l~~~ 255 (340)
.+|. ..+.|+|||++|||+|+..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~C~CGs~~CrG~l~~~ 288 (290)
T 3bo5_A 252 RYLNLTVSASKERLDHGKLRKPCYCGAKSCTAFLPFD 288 (290)
T ss_dssp CTTCCSSSEEEEEEECSSCCCBCCCCCTTCCSBCCCE
T ss_pred ccccccccccccccccCCCCccccCCCcCCCccCCCC
Confidence 7653 2478999999999999753
No 6
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.8e-49 Score=373.08 Aligned_cols=240 Identities=29% Similarity=0.464 Sum_probs=186.6
Q ss_pred chhhHHHHHHHHHHhhCC-CeeEeCCCCCCCC-CCCCcEEccceeeccccccccCCCCCCcccccCCCCCCCCCCCCCCc
Q 019476 9 DNSRIGHAFNKLLKQIGN-PVEFELPDWFIKP-KAIPYVFIKRNIYLTKRIKRRLEDDGIFCSCTASPGSSGVCDRDCHC 86 (340)
Q Consensus 9 ~~~~~~~~~~~l~~~~~~-~~~~~lp~~~~~~-~p~~f~~I~~n~~~~~~~~~~~~~~~~~C~C~~~~~~~~~C~~~C~c 86 (340)
+|....+.|++.++..+. ..++.+.+.++.. .|+.|+||+++++..... .......+|+|.+ |.....|...+..
T Consensus 22 ~q~~~~~~w~~~~~~~~~~~~~i~~~N~vd~~~~P~~f~yi~~~~~~~~~~--~~~~~~~gC~C~~-C~~~~cc~~~~~~ 98 (300)
T 2r3a_A 22 KQRIALQRWQDELNRRKNHKGMIFVENTVDLEGPPSDFYYINEYKPAPGIS--LVNEATFGCSCTD-CFFQKCCPAEAGV 98 (300)
T ss_dssp HHHHHHHHHHHHHHHHCCSSSCEEEECSSSCCCCCSSCEECSSCEECTTCC--CC---CCCCCCSS-TTTSSCHHHHTTS
T ss_pred hhHHHHHHHHHHhcccccCCCCeEEEeCcCCccCCCCEEECcccccCCCCc--cCCCCCCCcCCcC-CCCCCcchhhccC
Confidence 344556778888888744 3456666666554 456899999998865421 1134457899985 4332222111111
Q ss_pred --------------cceeeeCCCCCCCCCCCCCccCccCCcccEEEEEec-CCCcEEEeccccCCCceEEEEeeEEechh
Q 019476 87 --------------GMLLSSCSSGCKCGNSCLNKPFQNRPVKKMKLVQTE-KCGAGIVADEDIKRGEFVIEYVGEVIDDQ 151 (340)
Q Consensus 87 --------------~~~~~eC~~~C~C~~~C~Nr~~q~~~~~~l~i~~t~-~kG~GlfA~~~I~~G~~I~ey~Geii~~~ 151 (340)
+.+++||++.|+|+..|+||++|++...+++|+++. .+||||||+++|++|+||+||+|||++.+
T Consensus 99 ~~~Y~~~g~l~~~~~~~i~EC~~~C~C~~~C~Nr~~q~g~~~~l~vfrt~~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~ 178 (300)
T 2r3a_A 99 LLAYNKNQQIKIPPGTPIYECNSRCQCGPDCPNRIVQKGTQYSLCIFRTSNGRGWGVKTLVKIKRMSFVMEYVGEVITSE 178 (300)
T ss_dssp CCSBCTTSCBCSCTTCCEECCCTTSSCCTTCTTCSGGGCCCSCEEEEECSSSCCEEEEESSCBCTTCEEEEECCEEEEHH
T ss_pred ccccccCCcEeccCCCcEEeCCCCCCCCCcCCCccccccccccEEEEEeCCCceEEEEeCccccCCCEeEEEeeEEecHH
Confidence 235899999999999999999999999999999985 79999999999999999999999999999
Q ss_pred hHHHHHHHhhhcCCCceEEeeec---cceEEeecccCCccccccCCCCCCcceeEEEEC----CeEEEEEEEcCCCCCCC
Q 019476 152 TCEERLWKMKHLGETNFYLCEIN---RDMVIDATYKGNKSRYINHSCCPNTEMQKWIID----GETRIGIFATRDIKKGE 224 (340)
Q Consensus 152 e~~~r~~~~~~~~~~~~y~~~l~---~~~~IDa~~~Gn~aRfINHSC~PN~~~~~~~~~----g~~ri~i~A~RdI~~GE 224 (340)
++++|...+... ...|+|.++ ..++|||+.+||++|||||||+||+.+..|.++ +.++++|||+|||++||
T Consensus 179 ea~~R~~~y~~~--~~~Y~f~l~~~~~~~~IDa~~~GN~aRfiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~rdI~~GE 256 (300)
T 2r3a_A 179 EAERRGQFYDNK--GITYLFDLDYESDEFTVDAARYGNVSHFVNHSCDPNLQVFNVFIDNLDTRLPRIALFSTRTINAGE 256 (300)
T ss_dssp HHHHHHHTCCHH--HHHTEEECCSSCSSEEEECSSEECGGGGCEECSSCSEEEEEEESSCCCTTSCEEEEEESSCBCTTC
T ss_pred HHHHHHHHhhhc--cccEEEEeecCCceEEEecccccChHHheecCCCCCEEEEEEEeccCCCCceEEEEEEccCCCCCC
Confidence 998886544322 235777775 568999999999999999999999999888765 35799999999999999
Q ss_pred eEEEecCCCcCC---------------CCceeecCCCCCccccC
Q 019476 225 NLTYDYQFVQFG---------------ADQDCHCGAAGCRRKLG 253 (340)
Q Consensus 225 ELT~dY~~~~~~---------------~~~~C~Cgs~~Crg~l~ 253 (340)
||||||++.... ..+.|+|||++|||+|.
T Consensus 257 ELt~dY~~~~~~~~~~~~~d~~~~~~~~~~~C~CGs~~Crg~ln 300 (300)
T 2r3a_A 257 ELTFDYQMKGSGDISSDSIDHSPAKKRVRTVCKCGAVTCRGYLN 300 (300)
T ss_dssp EEEECGGGSSCC--------------CCCCBCCCCCTTCCSBCC
T ss_pred EEEEECCCCccccccccccccccccccCCCEeeCCCccccccCc
Confidence 999999977432 14799999999999973
No 7
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=100.00 E-value=3.9e-49 Score=376.31 Aligned_cols=227 Identities=26% Similarity=0.462 Sum_probs=162.6
Q ss_pred CCeeEeCCCCCC-CCCCCCcEEccceeeccccccccCCCCCCcccccC--CCC-CCCCCCCC------------------
Q 019476 26 NPVEFELPDWFI-KPKAIPYVFIKRNIYLTKRIKRRLEDDGIFCSCTA--SPG-SSGVCDRD------------------ 83 (340)
Q Consensus 26 ~~~~~~lp~~~~-~~~p~~f~~I~~n~~~~~~~~~~~~~~~~~C~C~~--~~~-~~~~C~~~------------------ 83 (340)
|.+++.+-+..+ ...|+.|+||+++++.... .........+|+|.. +|. +.+.|...
T Consensus 8 e~~pi~~~N~vd~~~~P~~F~Yi~~~~~~~~~-~~~~~~~~~gC~C~~~~~C~~~~C~C~~~~~~~~~~~~~~~~~~~~~ 86 (302)
T 1ml9_A 8 AQLPISIVNREDDAFLNPNFRFIDHSIIGKNV-PVADQSFRVGCSCASDEECMYSTCQCLDEMAPDSDEEADPYTRKKRF 86 (302)
T ss_dssp -CCCEEEECSSSSCCCCTTCEECSSCEECTTC-CCCCGGGCCCCCCSSTTGGGSTTSGGGTTSCCC-----------CCS
T ss_pred CCCCEEEEeCCCCCCCCCCCEEeeeeecCCCc-cccCcccCCCccCcCCCCcCCCCCcChhhcccccccccccccccccc
Confidence 445566545554 4568899999999986552 222233457899987 442 22334110
Q ss_pred ----------CC------ccceeeeCCCCCCCCCCCCCccCccCCcccEEEEEecCCCcEEEeccccCCCceEEEEeeEE
Q 019476 84 ----------CH------CGMLLSSCSSGCKCGNSCLNKPFQNRPVKKMKLVQTEKCGAGIVADEDIKRGEFVIEYVGEV 147 (340)
Q Consensus 84 ----------C~------c~~~~~eC~~~C~C~~~C~Nr~~q~~~~~~l~i~~t~~kG~GlfA~~~I~~G~~I~ey~Gei 147 (340)
++ .+.+++||++.|+|+..|.||++|++...+++|++++.+||||||+++|++|+||+||+|||
T Consensus 87 ~y~~~g~~~g~l~~~~~~~~~~i~EC~~~C~C~~~C~Nr~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~EY~Gev 166 (302)
T 1ml9_A 87 AYYSQGAKKGLLRDRVLQSQEPIYECHQGCACSKDCPNRVVERGRTVPLQIFRTKDRGWGVKCPVNIKRGQFVDRYLGEI 166 (302)
T ss_dssp SBBCSSTTBTSBCHHHHHHCCCEECCCTTCSSCTTCTTCHHHHCCCSCEEEEECSSSCEEEECSSCBCTTCEEEECCCEE
T ss_pred ccccCCcccceeehhcccCCCCeEecCCCCCCCCCCCCcccccCCccceEEEEcCCCceEEEECCeeCCCCEEEEEeeEE
Confidence 11 12457999999999999999999999999999999999999999999999999999999999
Q ss_pred echhhHHHHHHHhhhcCCCceEEeeecc--------------ceEEeecccCCccccccCCCCCCcceeEEEEC----Ce
Q 019476 148 IDDQTCEERLWKMKHLGETNFYLCEINR--------------DMVIDATYKGNKSRYINHSCCPNTEMQKWIID----GE 209 (340)
Q Consensus 148 i~~~e~~~r~~~~~~~~~~~~y~~~l~~--------------~~~IDa~~~Gn~aRfINHSC~PN~~~~~~~~~----g~ 209 (340)
++.+++++|...+......+.|+|.++. .++|||+.+||++|||||||+||+.+..+..+ +.
T Consensus 167 i~~~e~~~R~~~~~~~~~~~~Y~f~l~~~~~~~~~d~~~~~~~~~IDa~~~GN~arfiNHSC~PN~~~~~~~~~~~~~~~ 246 (302)
T 1ml9_A 167 ITSEEADRRRAESTIARRKDVYLFALDKFSDPDSLDPLLAGQPLEVDGEYMSGPTRFINHSCDPNMAIFARVGDHADKHI 246 (302)
T ss_dssp ECHHHHHHHHHHSCGGGCHHHHEEECCSSCCSSSSCHHHHSCCCEEECSSEECGGGGCEECSSCSEEEEEEESSGGGGGG
T ss_pred eCHHHHHHHHHHHhhhcCCceEEEEeccccCcccccccccCCcEEEeCcccCCHHHhcccCCCCCeeEEEEEeccCCCCc
Confidence 9999999887655333345678888763 68999999999999999999999988755433 23
Q ss_pred EEEEEEEcCCCCCCCeEEEecCCCcCCC------------CceeecCCCCCccccC
Q 019476 210 TRIGIFATRDIKKGENLTYDYQFVQFGA------------DQDCHCGAAGCRRKLG 253 (340)
Q Consensus 210 ~ri~i~A~RdI~~GEELT~dY~~~~~~~------------~~~C~Cgs~~Crg~l~ 253 (340)
++++|||+|||++||||||||++.++.. .+.|+|||++|||+|.
T Consensus 247 ~~i~~~A~rdI~~GeELt~dY~~~~~~~~~~~~~~~k~~~~~~C~CGs~~Crg~l~ 302 (302)
T 1ml9_A 247 HDLALFAIKDIPKGTELTFDYVNGLTGLESDAHDPSKISEMTKCLCGTAKCRGYLW 302 (302)
T ss_dssp CEEEEEESSCBCTTCEEEECTTC---------------------------------
T ss_pred eEEEEEECCCcCCCCEEEEEECCCccccccccccccccCCCcEeeCCCCcCccccC
Confidence 6999999999999999999999876642 3689999999999984
No 8
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=100.00 E-value=2.6e-49 Score=374.74 Aligned_cols=218 Identities=30% Similarity=0.546 Sum_probs=174.4
Q ss_pred HHhhCCCeeEeCCCCCCC-CCCCCcEEccceeeccccccccCCCCCCcccccCCCCCCCCCCCCCCc-------------
Q 019476 21 LKQIGNPVEFELPDWFIK-PKAIPYVFIKRNIYLTKRIKRRLEDDGIFCSCTASPGSSGVCDRDCHC------------- 86 (340)
Q Consensus 21 ~~~~~~~~~~~lp~~~~~-~~p~~f~~I~~n~~~~~~~~~~~~~~~~~C~C~~~~~~~~~C~~~C~c------------- 86 (340)
++...|.+++.+-+.++. +.|+.|+||.++++..............+|+|..+|.+ ..|.|
T Consensus 35 is~G~E~~pi~~~N~vD~~~~p~~f~Y~~~~~~~~~~~~~~~~~~~~gC~C~~~C~~-----~~C~C~~~~~~~~y~~~g 109 (287)
T 3hna_A 35 IARGYERIPIPCVNAVDSEPCPSNYKYVSQNCVTSPMNIDRNITHLQYCVCIDDCSS-----SNCMCGQLSMRCWYDKDG 109 (287)
T ss_dssp TTTTCSSSCCCEEESSSSCCCCCSSEECSSCEESSCCCCCCBGGGCCCCCCSSSSCS-----TTCHHHHHTSSCCBCTTS
T ss_pred hCCCCCCCCEEEEeCCCCCCCCCCcEEccccccCCCccccccCCCCCCCcCcCCCCC-----CCCcCcccCcccccCCCC
Confidence 344444455554444444 45889999999988654222222234568999986543 13433
Q ss_pred ----------cceeeeCCCCCCCCCCCCCccCccCCcccEEEEEecCCCcEEEeccccCCCceEEEEeeEEechhhHHHH
Q 019476 87 ----------GMLLSSCSSGCKCGNSCLNKPFQNRPVKKMKLVQTEKCGAGIVADEDIKRGEFVIEYVGEVIDDQTCEER 156 (340)
Q Consensus 87 ----------~~~~~eC~~~C~C~~~C~Nr~~q~~~~~~l~i~~t~~kG~GlfA~~~I~~G~~I~ey~Geii~~~e~~~r 156 (340)
..+++||++.|+|+..|+||++|++...+++|++++++||||||+++|++|++|+||+||+++.++++.|
T Consensus 110 ~l~~~~~~~~~~~i~EC~~~C~C~~~C~Nr~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~eY~Gevi~~~e~~~r 189 (287)
T 3hna_A 110 RLLPEFNMAEPPLIFECNHACSCWRNCRNRVVQNGLRARLQLYRTRDMGWGVRSLQDIPPGTFVCEYVGELISDSEADVR 189 (287)
T ss_dssp CBCTTCCSSSCCCEECCCTTSSSCTTCSSCSGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEEECEEEEEHHHHHTC
T ss_pred cccccccccCCceEEecCCCCCCCCCCCCcccCcCCcccEEEEEcCCCceEEEeCcccCCCCEEEEeeeEEccHHHHhhh
Confidence 2458999999999999999999999999999999999999999999999999999999999999887654
Q ss_pred HHHhhhcCCCceEEeeeccc----eEEeecccCCccccccCCCCCCcceeEEEECC----eEEEEEEEcCCCCCCCeEEE
Q 019476 157 LWKMKHLGETNFYLCEINRD----MVIDATYKGNKSRYINHSCCPNTEMQKWIIDG----ETRIGIFATRDIKKGENLTY 228 (340)
Q Consensus 157 ~~~~~~~~~~~~y~~~l~~~----~~IDa~~~Gn~aRfINHSC~PN~~~~~~~~~g----~~ri~i~A~RdI~~GEELT~ 228 (340)
..+.|+|.++.. ++|||+.+||++|||||||+||+.++.+++.+ .++++|||+|||++||||||
T Consensus 190 --------~~~~Y~f~l~~~~~~~~~IDa~~~GN~aRFiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~RdI~~GEELT~ 261 (287)
T 3hna_A 190 --------EEDSYLFDLDNKDGEVYCIDARFYGNVSRFINHHCEPNLVPVRVFMAHQDLRFPRIAFFSTRLIEAGEQLGF 261 (287)
T ss_dssp --------SCCTTEEESCCSSSSCEEEEEEEEECGGGGCEECSSCSEEEEEEESSCCCTTCCEEEEEESSCBCTTCBCEE
T ss_pred --------cccceEEEeccCCCceEEEeccccCCchheeeecCCCCceeEEEEEecCCCCceeEEEEEcceeCCCCeEEE
Confidence 234677777653 69999999999999999999999988776543 46999999999999999999
Q ss_pred ecCCCcCC---CCceeecCCCCCccc
Q 019476 229 DYQFVQFG---ADQDCHCGAAGCRRK 251 (340)
Q Consensus 229 dY~~~~~~---~~~~C~Cgs~~Crg~ 251 (340)
||+..++. ..+.|+||+++|||.
T Consensus 262 dYg~~~~~~~~~~~~C~CGs~~CRgs 287 (287)
T 3hna_A 262 DYGERFWDIKGKLFSCRCGSPKCRHS 287 (287)
T ss_dssp CCCHHHHHHHTTTCCCCCCCTTCSCC
T ss_pred eCCCcccccCCCcCEeeCCCCCCCCC
Confidence 99976653 468999999999984
No 9
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=100.00 E-value=7.3e-40 Score=293.09 Aligned_cols=151 Identities=36% Similarity=0.614 Sum_probs=132.9
Q ss_pred CCCCccCccCCcccEEEEEecCCCcEEEeccccCCCceEEEEeeEEechhhHHHHHHHhhhcCCCceEEeeeccceEEee
Q 019476 102 SCLNKPFQNRPVKKMKLVQTEKCGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLGETNFYLCEINRDMVIDA 181 (340)
Q Consensus 102 ~C~Nr~~q~~~~~~l~i~~t~~kG~GlfA~~~I~~G~~I~ey~Geii~~~e~~~r~~~~~~~~~~~~y~~~l~~~~~IDa 181 (340)
.|.++.+|++...+++|++++.+||||||+++|++|++|+||+|++++..++++|...+...+ ...|+|.++..++|||
T Consensus 40 ~~~~~~l~~~~~~~l~V~~s~~~G~GlfA~~~I~~G~~I~EY~Gevi~~~e~~~R~~~y~~~~-~~~Y~f~l~~~~~IDa 118 (192)
T 2w5y_A 40 PMRFRHLKKTSKEAVGVYRSPIHGRGLFCKRNIDAGEMVIEYAGNVIRSIQTDKREKYYDSKG-IGCYMFRIDDSEVVDA 118 (192)
T ss_dssp HHHHTTHHHHHHHHEEEEECSSSSEEEEESSCBCTTCEEEECCSEEEEGGGHHHHHHHHHHHT-CCCCEEECSSSEEEEC
T ss_pred chhHHHHhccCCCcEEEEEcCCceeEEEECcccCCCCEEEEeeeeEechHHHHHHHHHHhhcC-CceeeeeecCceEEEC
Confidence 566778888888899999999999999999999999999999999999999888765554432 3468899999999999
Q ss_pred cccCCccccccCCCCCCcceeEEEECCeEEEEEEEcCCCCCCCeEEEecCCCcCC--CCceeecCCCCCccccC
Q 019476 182 TYKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQFG--ADQDCHCGAAGCRRKLG 253 (340)
Q Consensus 182 ~~~Gn~aRfINHSC~PN~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~~~--~~~~C~Cgs~~Crg~l~ 253 (340)
+..||++|||||||+|||.++.|.++|..+++|||+|||++|||||+||++..+. ..+.|.||+++|||+|.
T Consensus 119 ~~~Gn~arfiNHSC~PN~~~~~~~~~g~~~i~i~A~rdI~~GEELt~dY~~~~~~~~~~~~C~Cgs~~Crg~ln 192 (192)
T 2w5y_A 119 TMHGNAARFINHSCEPNCYSRVINIDGQKHIVIFAMRKIYRGEELTYDYKFPIEDASNKLPCNCGAKKCRKFLN 192 (192)
T ss_dssp TTTCCGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCEEEECCCC-------CCBCCCCCTTCCSBCC
T ss_pred ccccChhHhhccCCCCCEEEEEEEECCcEEEEEEECcccCCCCEEEEEcCCchhcCCCCceeECCCCCCcCcCC
Confidence 9999999999999999999998889999999999999999999999999998875 36899999999999983
No 10
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=100.00 E-value=7.8e-35 Score=254.07 Aligned_cols=132 Identities=29% Similarity=0.470 Sum_probs=117.1
Q ss_pred CCccCccCCcccEEEEEecCCCcEEEeccccCCCceEEEEeeEEechhhHHHHHHHhhhcCCC---ceEEeeeccceEEe
Q 019476 104 LNKPFQNRPVKKMKLVQTEKCGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLGET---NFYLCEINRDMVID 180 (340)
Q Consensus 104 ~Nr~~q~~~~~~l~i~~t~~kG~GlfA~~~I~~G~~I~ey~Geii~~~e~~~r~~~~~~~~~~---~~y~~~l~~~~~ID 180 (340)
.++++|++...+++|+.++++||||||+++|++|++|+||+|++++..+++.|...+...... .+++..++..++||
T Consensus 20 ~~~~~q~g~~~~l~v~~~~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~y~~~~~~~~~~~~iD 99 (166)
T 3f9x_A 20 IDELIESGKEEGMKIDLIDGKGRGVIATKQFSRGDFVVEYHGDLIEITDAKKREALYAQDPSTGCYMYYFQYLSKTYCVD 99 (166)
T ss_dssp HHHHHHHTCCTTEEEEEETTTEEEEEESSCBCTTCEEEECCSEEEEHHHHHHHHHHHTTCTTSCCCEEEEEETTEEEEEE
T ss_pred HHHHHHcCCccCeEEEECCCceeEEEECCCcCCCCEEEEeeceEcCHHHHHHHHHHHhhccCCCceEEEEecCCCCeEEe
Confidence 356788899999999999999999999999999999999999999999999887666543333 23444477889999
Q ss_pred eccc-CCccccccCCCCCCcceeEEEECCeEEEEEEEcCCCCCCCeEEEecCCCcC
Q 019476 181 ATYK-GNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQF 235 (340)
Q Consensus 181 a~~~-Gn~aRfINHSC~PN~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~~ 235 (340)
|+.. ||++|||||||+|||.+..+.+++.++++|||+|||++||||||||++.+.
T Consensus 100 a~~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~ 155 (166)
T 3f9x_A 100 ATRETNRLGRLINHSKCGNCQTKLHDIDGVPHLILIASRDIAAGEELLFDYGDRSK 155 (166)
T ss_dssp CCSCCSCSGGGCEECTTCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCCCCCH
T ss_pred chhcCCChhheeecCCCCCeeEEEEEECCeeEEEEEECCcCCCCCEEEEEcCCChh
Confidence 9996 999999999999999999999999999999999999999999999998764
No 11
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=99.96 E-value=3.6e-29 Score=233.67 Aligned_cols=141 Identities=18% Similarity=0.229 Sum_probs=113.4
Q ss_pred ceeeeCCCCCCCCCCCCCccCccCC-cccEEEEEecCC--CcEEEeccccCCCceEEEEeeEEechhhHHHHHHHhhhcC
Q 019476 88 MLLSSCSSGCKCGNSCLNKPFQNRP-VKKMKLVQTEKC--GAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLG 164 (340)
Q Consensus 88 ~~~~eC~~~C~C~~~C~Nr~~q~~~-~~~l~i~~t~~k--G~GlfA~~~I~~G~~I~ey~Geii~~~e~~~r~~~~~~~~ 164 (340)
...++|...|.. ..|.|..+.... ...++|.+++.+ ||||||+++|++|++|+||+||+|+..++++|...+
T Consensus 83 ~~~~~~d~~~~~-~i~~~~~~~~~~~~~~~~v~~S~i~~kG~GvfA~~~I~~G~~I~eY~Gevi~~~e~~~R~~~~---- 157 (261)
T 2f69_A 83 NSVYHFDKSTSS-CISTNALLPDPYESERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWAL---- 157 (261)
T ss_dssp CCEECCCCCCSS-CSCSCTTSCCHHHHTTEEEEECSSTTCCEEEEESSCBCTTCEEEEECCEEECHHHHHTSCGGG----
T ss_pred CceEecCcccCc-ceeCccccCCcccCceEEEEecCCCCCceEEEECcccCCCCEEEEEeeEEeCHHHHHHHhhhh----
Confidence 357888876542 346777665432 457899998755 999999999999999999999999999988765433
Q ss_pred CCceEEeeeccceEEeec--------ccCCccccccCCCCCCcceeEEEECCeEE-EEEEEcCCCCCCCeEEEecCCCcC
Q 019476 165 ETNFYLCEINRDMVIDAT--------YKGNKSRYINHSCCPNTEMQKWIIDGETR-IGIFATRDIKKGENLTYDYQFVQF 235 (340)
Q Consensus 165 ~~~~y~~~l~~~~~IDa~--------~~Gn~aRfINHSC~PN~~~~~~~~~g~~r-i~i~A~RdI~~GEELT~dY~~~~~ 235 (340)
..|.|.++..++||+. ..||++|||||||+|||.+..|...+..+ ++|||+|||++|||||+||++...
T Consensus 158 --~~~~f~l~~~~~IDa~~~~~~~~~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dYg~~~~ 235 (261)
T 2f69_A 158 --NGNTLSLDEETVIDVPEPYNHVSKYCASLGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHS 235 (261)
T ss_dssp --CSSCEECSSSCEEECCTTTTSTTTCCSCCGGGCEECSSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEECCCCCSC
T ss_pred --ccceeeecCCeEEEccccccccccccccceeeEeeCCCCCeEEEEEEcCCCCcEEEEEECcccCCCCEEEEEcCCccc
Confidence 2356889999999995 48999999999999999998874434334 499999999999999999997654
No 12
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=99.95 E-value=3e-29 Score=207.61 Aligned_cols=110 Identities=22% Similarity=0.269 Sum_probs=97.1
Q ss_pred cccEEEEEecCCCcEEEeccccCCCceEEEEeeEEechhhHHHHHHHhhhcCCCceEEeeeccceEEeecccCCcccccc
Q 019476 113 VKKMKLVQTEKCGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLGETNFYLCEINRDMVIDATYKGNKSRYIN 192 (340)
Q Consensus 113 ~~~l~i~~t~~kG~GlfA~~~I~~G~~I~ey~Geii~~~e~~~r~~~~~~~~~~~~y~~~l~~~~~IDa~~~Gn~aRfIN 192 (340)
.++++|.+++.+||||||+++|++|++|+||.|++++.++++. ....|+|.++. |+...+|.+||||
T Consensus 3 ~~~~~v~~s~~~G~GvfA~~~I~~G~~I~ey~g~vi~~~e~~~---------~~~~y~f~~~~----d~~~~~~~~~~~N 69 (119)
T 1n3j_A 3 NDRVIVKKSPLGGYGVFARKSFEKGELVEECLCIVRHNDDWGT---------ALEDYLFSRKN----MSAMALGFGAIFN 69 (119)
T ss_dssp CSSEEEECSCSSCCEEEECCCBCSCEEECCCCCEEECSHHHHH---------HSCSEEEEETT----EEEEESSSHHHHH
T ss_pred CCCEEEEECCCceeEEEECCcCCCCCEEEEeeEEEECHHHHhh---------ccCCeEEEeCC----ccccccCceeeec
Confidence 4689999999999999999999999999999999999877654 12347888776 8999999999999
Q ss_pred CCCCCCcceeEEEECCeEEEEEEEcCCCCCCCeEEEecCCCcCCC
Q 019476 193 HSCCPNTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQFGA 237 (340)
Q Consensus 193 HSC~PN~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~~~~ 237 (340)
|||+|||.+.. ..+..++.++|+|||++|||||+||+..+|+.
T Consensus 70 Hsc~pN~~~~~--~~~~~~~~~~A~rdI~~GeElt~~Y~~~~~~~ 112 (119)
T 1n3j_A 70 HSKDPNARHEL--TAGLKRMRIFTIKPIAIGEEITISYGDDYWLS 112 (119)
T ss_dssp SCSSCCCEEEE--CSSSSCEEEEECSCBCSSEEECCCCCCCCCCC
T ss_pred cCCCCCeeEEE--ECCCeEEEEEEccccCCCCEEEEecCchhhcC
Confidence 99999998754 45677999999999999999999999998865
No 13
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=99.95 E-value=6.7e-29 Score=231.96 Aligned_cols=136 Identities=26% Similarity=0.367 Sum_probs=104.3
Q ss_pred ccEEEEEe-----cCCCcEEEeccccCCCceEEEEeeEEechhhHHHHHHHhhhcCCCceEEeeeccceEEeecccCCcc
Q 019476 114 KKMKLVQT-----EKCGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLGETNFYLCEINRDMVIDATYKGNKS 188 (340)
Q Consensus 114 ~~l~i~~t-----~~kG~GlfA~~~I~~G~~I~ey~Geii~~~e~~~r~~~~~~~~~~~~y~~~l~~~~~IDa~~~Gn~a 188 (340)
.+++|..+ +++||||||+++|++|++|+||+|+++...+.+++. +.......+++.... ...+++.+||.+
T Consensus 131 ~gfeV~~~~ry~~e~~G~GlfA~~~I~kGe~I~EY~Geii~~~e~ee~~--~~~~~~~dF~i~~s~--~~~~a~~~g~~a 206 (273)
T 3s8p_A 131 SGFEILPCNRYSSEQNGAKIVATKEWKRNDKIELLVGCIAELSEIEENM--LLRHGENDFSVMYST--RKNCAQLWLGPA 206 (273)
T ss_dssp GCEEEEEECCCTTCSSEEEEEESSCBCTTCEEEEEEEEEEEECHHHHHH--HCCTTTSCTTEEEET--TTTEEEEEESGG
T ss_pred CCceEEeccceeecCCCceEEECCccCCCCEEEEEEEEEccccHHHHHH--Hhhhcccccceeccc--cccccceecchH
Confidence 35666664 569999999999999999999999998777665542 212222222222211 123578899999
Q ss_pred ccccCCCCCCcceeEEEECCeEEEEEEEcCCCCCCCeEEEecCCCcCCC-CceeecCCCCCccccCCCC
Q 019476 189 RYINHSCCPNTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQFGA-DQDCHCGAAGCRRKLGAKP 256 (340)
Q Consensus 189 RfINHSC~PN~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~~~~-~~~C~Cgs~~Crg~l~~~~ 256 (340)
|||||||+|||.+. ..+..++.|+|+|||++|||||+||+...++. .+.|.||+++|||..+.++
T Consensus 207 rfiNHSC~PN~~~~---~~~~~~i~i~A~RdI~~GEELt~~Y~~~~~~~~~f~C~C~~c~crG~g~f~s 272 (273)
T 3s8p_A 207 AFINHDCRPNCKFV---STGRDTACVKALRDIEPGEEISCYYGDGFFGENNEFCECYTCERRGTGAFKS 272 (273)
T ss_dssp GGCEECSSCSEEEE---EEETTEEEEEESSCBCTTCBCEECCCTTTTSGGGTTCCCHHHHHHTCGGGCC
T ss_pred HhhCCCCCCCeEEE---EcCCCEEEEEECceeCCCCEEEEecCchhcCCCCeEEECCCCcCCCCCCCcC
Confidence 99999999999763 23446899999999999999999999988865 5899999999999976553
No 14
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=99.94 E-value=3.9e-27 Score=223.21 Aligned_cols=117 Identities=21% Similarity=0.300 Sum_probs=99.7
Q ss_pred cccEEEEEecC--CCcEEEeccccCCCceEEEEeeEEechhhHHHHHHHhhhcCCCceEEeeeccceEEee--------c
Q 019476 113 VKKMKLVQTEK--CGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLGETNFYLCEINRDMVIDA--------T 182 (340)
Q Consensus 113 ~~~l~i~~t~~--kG~GlfA~~~I~~G~~I~ey~Geii~~~e~~~r~~~~~~~~~~~~y~~~l~~~~~IDa--------~ 182 (340)
...++|.+|+. +||||||+++|++|++|+||+|++++..++++|.... ..|.|.++...+||| +
T Consensus 162 ~~~~~v~~S~i~GkG~Gvfa~~~I~~G~~I~ey~Ge~i~~~~~~~r~~~~------~~~~~~l~~~~~iDa~~~~~~~~~ 235 (293)
T 1h3i_A 162 SERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWAL------NGNTLSLDEETVIDVPEPYNHVSK 235 (293)
T ss_dssp HTTEEEEECSSSSSSEEEEESSCBCTTCEEEEECCEEECHHHHHHSCGGG------CTTEEECSSSCEEECCTTTTSTTT
T ss_pred ceeEEEeeeecCCCcceEEECCcCCCCCEEEEeccEEcCHHHHhHHhhhc------ccCEEecCCCEEEeCcccccccce
Confidence 35789998855 4599999999999999999999999999988874332 235688999999999 7
Q ss_pred ccCCccccccCCCCCCcceeEEEECCeEE-EEEEEcCCCCCCCeEEEecCCCcC
Q 019476 183 YKGNKSRYINHSCCPNTEMQKWIIDGETR-IGIFATRDIKKGENLTYDYQFVQF 235 (340)
Q Consensus 183 ~~Gn~aRfINHSC~PN~~~~~~~~~g~~r-i~i~A~RdI~~GEELT~dY~~~~~ 235 (340)
..||++|||||||+|||.++.+...+..+ ++|||+|||++|||||+||+++..
T Consensus 236 ~~gn~ar~iNHsc~pN~~~~~~~~~~~~~~~~~~a~r~I~~geElt~~Yg~~~~ 289 (293)
T 1h3i_A 236 YCASLGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHS 289 (293)
T ss_dssp CCSCCGGGSEEESSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEEEEETTBC
T ss_pred eeccceeeeccCCCCCeEEEEEEcCCCCcEEEEEECCccCCCCEEEEecCCCCC
Confidence 79999999999999999998875544345 489999999999999999998764
No 15
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*
Probab=99.94 E-value=3.6e-27 Score=202.71 Aligned_cols=111 Identities=28% Similarity=0.321 Sum_probs=92.8
Q ss_pred CCcccEEEEEe--cCCCcEEEeccccCCCceEEEEeeEEechhhHHHHHHHhhhcCCCceEEeeec---c-ceEEeecc-
Q 019476 111 RPVKKMKLVQT--EKCGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLGETNFYLCEIN---R-DMVIDATY- 183 (340)
Q Consensus 111 ~~~~~l~i~~t--~~kG~GlfA~~~I~~G~~I~ey~Geii~~~e~~~r~~~~~~~~~~~~y~~~l~---~-~~~IDa~~- 183 (340)
.....++|.+| +++||||||+++|++|++|++|.|++++.+++. ...|+|.+. . .++|||+.
T Consensus 26 ~lp~~l~l~~S~i~~~G~GVfA~~~I~kG~~~gey~Ge~i~~~e~~-----------~~~Y~f~i~~~~~~~~~IDa~~~ 94 (149)
T 2qpw_A 26 GLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFVGDKKKRSQVK-----------NNVYMWEVYYPNLGWMCIDATDP 94 (149)
T ss_dssp TCCTTEEEEECSSCTTSEEEEESSCBCTTCEECCCCCEEECGGGCC-----------CSSSEEEEEETTTEEEEEECSSG
T ss_pred CCCCCeEEEEcCCCCCceEEEECCccCCCCEEEEEeCEEcCHHHhc-----------cCceEEEEecCCCeeEEEeCCCC
Confidence 45568999998 467999999999999999999999999876531 245777773 2 36799997
Q ss_pred -cCCccccccCCCCC---CcceeEEEECCeEEEEEEEcCCCCCCCeEEEecCCCcCC
Q 019476 184 -KGNKSRYINHSCCP---NTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQFG 236 (340)
Q Consensus 184 -~Gn~aRfINHSC~P---N~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~~~ 236 (340)
.||++|||||||+| ||... .. ..++.|+|+|||++|||||+||+..++.
T Consensus 95 ~~gn~~RfINhSc~p~eqNl~~~--~~--~~~I~~~A~RdI~~GEEL~~dY~~~~~~ 147 (149)
T 2qpw_A 95 EKGNWLRYVNWACSGEEQNLFPL--EI--NRAIYYKTLKPIAPGEELLVWYNGEDNP 147 (149)
T ss_dssp GGSCGGGGCEECBTTBTCCEEEE--EE--TTEEEEEESSCBCTTCBCEECCCCCCCC
T ss_pred CCCcceeeeeccCChhhcCEEEE--EE--CCEEEEEEccCCCCCCEEEEccCCccCC
Confidence 99999999999999 88763 23 3589999999999999999999988764
No 16
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}
Probab=99.91 E-value=1.6e-25 Score=206.84 Aligned_cols=125 Identities=26% Similarity=0.360 Sum_probs=93.3
Q ss_pred cCCCcEEEeccccCCCceEEEEeeEEechhhHHHHHHHhhhcCCCceEEeeeccceEEeecccCCccccccCCCCCCcce
Q 019476 122 EKCGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLGETNFYLCEINRDMVIDATYKGNKSRYINHSCCPNTEM 201 (340)
Q Consensus 122 ~~kG~GlfA~~~I~~G~~I~ey~Geii~~~e~~~r~~~~~~~~~~~~y~~~l~~~~~IDa~~~Gn~aRfINHSC~PN~~~ 201 (340)
.++||||||+++|++|++|.+|+|+++...+.+++. .......+..... ....++..+||++|||||||+|||.+
T Consensus 116 ~~~G~Gv~A~~~I~kGE~I~ey~Geli~~t~~e~~~---~~~~~n~f~i~~~--~~~~~~~l~~~~ar~iNHSC~PN~~~ 190 (247)
T 3rq4_A 116 ETNGAKIVSTRAWKKNEKLELLVGCIAELREADEGL---LRAGENDFSIMYS--TRKRSAQLWLGPAAFINHDCKPNCKF 190 (247)
T ss_dssp CSSCEEEEESSCBCTTCEEEEEEEEEEECCGGGGGG---CCTTTSCTTEEEE--TTTTEEEEEESGGGGCEECSSCSEEE
T ss_pred cCCcceEEeCCccCCCCEEEEEEeEEEeCcHHHHHh---hhccCCcEEEEec--CCcccceeecchhhhcCCCCCCCEEE
Confidence 578999999999999999999999998655544421 1111222222221 22257888999999999999999976
Q ss_pred eEEEECCeEEEEEEEcCCCCCCCeEEEecCCCcCCC-CceeecCCCCCccccCC
Q 019476 202 QKWIIDGETRIGIFATRDIKKGENLTYDYQFVQFGA-DQDCHCGAAGCRRKLGA 254 (340)
Q Consensus 202 ~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~~~~-~~~C~Cgs~~Crg~l~~ 254 (340)
.. ++ ..++.|+|+|||++|||||+||+..+|+. .+.|.|+++...+..+.
T Consensus 191 ~~--~~-~~~i~v~A~rdI~~GEElt~~Y~~~~~~~~~f~C~C~~C~~~~~g~f 241 (247)
T 3rq4_A 191 VP--AD-GNAACVKVLRDIEPGDEVTCFYGEGFFGEKNEHCECHTCERKGEGAF 241 (247)
T ss_dssp EE--ET-TTEEEEEESSCBCTTCBCEECCCTTSSSGGGTTCCCHHHHHHTCGGG
T ss_pred EE--eC-CCEEEEEECCcCCCCCEEEEecCchhcCCCCCEEECCCCCCCCCCcc
Confidence 44 33 35899999999999999999999998865 48899987655544443
No 17
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}
Probab=99.82 E-value=4e-20 Score=161.86 Aligned_cols=111 Identities=23% Similarity=0.212 Sum_probs=80.3
Q ss_pred cccEEEEEe--cCCCcEEEeccccCCCceEEEEeeEEechhhHHHHHHHhhhcCCCceEEeeecc-----ceEEeecc--
Q 019476 113 VKKMKLVQT--EKCGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLGETNFYLCEINR-----DMVIDATY-- 183 (340)
Q Consensus 113 ~~~l~i~~t--~~kG~GlfA~~~I~~G~~I~ey~Geii~~~e~~~r~~~~~~~~~~~~y~~~l~~-----~~~IDa~~-- 183 (340)
...+.|.+| +++|+||||+++|++|+++++|.|++++.+++... ..+.|++.+.. .++||++.
T Consensus 26 P~~l~l~~S~i~~~G~GVfA~~~IpkGt~fGpY~Ge~i~~~ea~~~--------~~~~y~w~i~~~~G~~~~~IDa~~e~ 97 (170)
T 3ep0_A 26 PAEVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDIC--------KNNNLMWEVFNEDGTVRYFIDASQED 97 (170)
T ss_dssp CTTEEEEECSSSSCSEEEEESSCBCTTCEEEEECCEEECC------------------CEEEEECTTSSEEEEEECC---
T ss_pred CCCeEEEEcCCCCCceEEEECcccCCCCEEEecCceecCHHHhccc--------cCCceEEEEecCCCcEEEEEECCCCC
Confidence 457899997 56799999999999999999999999998775431 12346666532 26899997
Q ss_pred cCCccccccCCCC---CCcceeEEEECCeEEEEEEEcCCCCCCCeEEEecCCCcC
Q 019476 184 KGNKSRYINHSCC---PNTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQF 235 (340)
Q Consensus 184 ~Gn~aRfINHSC~---PN~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~~ 235 (340)
.||++|||||+|. +|+.... .+ .++.++|+|||.+||||+++|+..+.
T Consensus 98 ~~NWmR~Vn~A~~~~eqNl~a~q--~~--~~I~~~a~RdI~pGeELlvwYg~~y~ 148 (170)
T 3ep0_A 98 HRSWMTYIKCARNEQEQNLEVVQ--IG--TSIFYKAIEMIPPDQELLVWYGNSHN 148 (170)
T ss_dssp ---GGGGCEECSSTTTCCEEEEE--ET--TEEEEEESSCBCTTCBCEEEECC---
T ss_pred CcceeeeEEecCCcccCCeeeEE--EC--CEEEEEECcCcCCCCEEEEeeCHHHH
Confidence 7999999999996 7876532 33 58999999999999999999998764
No 18
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}
Probab=99.79 E-value=2.4e-19 Score=154.29 Aligned_cols=112 Identities=17% Similarity=0.133 Sum_probs=79.0
Q ss_pred ccEEEEEe-cCCCcEEEeccccCCCceEEEEeeEEechhhHHHHHHHhhhcCCCceEEeeec---c-ceEEeecc--cCC
Q 019476 114 KKMKLVQT-EKCGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLGETNFYLCEIN---R-DMVIDATY--KGN 186 (340)
Q Consensus 114 ~~l~i~~t-~~kG~GlfA~~~I~~G~~I~ey~Geii~~~e~~~r~~~~~~~~~~~~y~~~l~---~-~~~IDa~~--~Gn 186 (340)
..++|..+ +++|+||||++.|++|+.+++|.|++++.+++..+. + ....|++.+. . ..+||++. .||
T Consensus 23 ~~l~l~~S~~~~g~GVfa~~~Ip~G~~fGPy~Ge~~~~~e~~~~~----~--~~~~y~w~i~~~~~~~~~iD~~~~~~~N 96 (151)
T 3db5_A 23 KQLVLRQSIVGAEVGVWTGETIPVRTCFGPLIGQQSHSMEVAEWT----D--KAVNHIWKIYHNGVLEFCIITTDENECN 96 (151)
T ss_dssp TTEEEEECC---CEEEEESSCBCTTCEECCCCCEEEC-----------------CCSEEEEEETTEEEEEEECCCTTTSC
T ss_pred CCeEEEEccCCCceEEEEecccCCCCEEEEeccEEeCHHHhhccc----c--cCCCceEEEEeCCCEEEEEECcCCCCCc
Confidence 46888885 678999999999999999999999999998776542 1 1122444432 2 35899997 599
Q ss_pred ccccccCCCCC---CcceeEEEECCeEEEEEEEcCCCCCCCeEEEecCCCcC
Q 019476 187 KSRYINHSCCP---NTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQF 235 (340)
Q Consensus 187 ~aRfINHSC~P---N~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~~ 235 (340)
++|||||||.+ |+.... .+ .++.++|+|||++||||+++|+..++
T Consensus 97 WmR~Vn~A~~~~eqNl~a~q--~~--~~I~~~a~rdI~pGeELlv~Yg~~y~ 144 (151)
T 3db5_A 97 WMMFVRKARNREEQNLVAYP--HD--GKIFFCTSQDIPPENELLFYYSRDYA 144 (151)
T ss_dssp GGGGCEECSSTTTCCEEEEE--ET--TEEEEEESSCBCTTCBCEEEECC---
T ss_pred ceeEEEecCCcccCceEEEE--EC--CEEEEEEccccCCCCEEEEecCHHHH
Confidence 99999999965 876632 33 58999999999999999999998765
No 19
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}
Probab=99.75 E-value=1.3e-18 Score=155.38 Aligned_cols=109 Identities=19% Similarity=0.229 Sum_probs=86.4
Q ss_pred ccEEEEEe--cCCCcEEEeccccCCCceEEEEeeEEechhhHHHHHHHhhhcCCCceEEeeecc----ceEEeecc--cC
Q 019476 114 KKMKLVQT--EKCGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLGETNFYLCEINR----DMVIDATY--KG 185 (340)
Q Consensus 114 ~~l~i~~t--~~kG~GlfA~~~I~~G~~I~ey~Geii~~~e~~~r~~~~~~~~~~~~y~~~l~~----~~~IDa~~--~G 185 (340)
..+.|.++ +++|+||||++.|++|+.+++|.|++++.+++.+. ..+.|++.+.. ..+||++. .|
T Consensus 58 ~~L~lr~S~i~~~G~GVfa~~~IpkGt~fGPY~Ge~~~~~e~~~~--------~~~~y~w~i~~~g~~~~~IDas~e~~g 129 (196)
T 3dal_A 58 RNLLFKYATNSEEVIGVMSKEYIPKGTRFGPLIGEIYTNDTVPKN--------ANRKYFWRIYSRGELHHFIDGFNEEKS 129 (196)
T ss_dssp TTEEEEECTTSCCEEEEEESSCBCTTEEECCCCCEEECTTTCC-----------CCTTEEEEEETTEEEEEEECCCTTSS
T ss_pred CCeEEEECCCCCceeEEEEccccCCCCEEEeccceEcCHHHhhhc--------cCCcceeeeccCCCEEEEEECCCCCCC
Confidence 47888887 55999999999999999999999999998764221 12345555532 36899987 89
Q ss_pred CccccccCCCC---CCcceeEEEECCeEEEEEEEcCCCCCCCeEEEecCCCc
Q 019476 186 NKSRYINHSCC---PNTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQ 234 (340)
Q Consensus 186 n~aRfINHSC~---PN~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~ 234 (340)
|++|||||+|. +|+... ..+ .++.++|+|||.+||||+++|+..+
T Consensus 130 NWmRfVn~A~~~~eqNl~a~--q~~--~~I~y~a~RdI~pGeELlvwYg~~Y 177 (196)
T 3dal_A 130 NWMRYVNPAHSPREQNLAAC--QNG--MNIYFYTIKPIPANQELLVWYCRDF 177 (196)
T ss_dssp CGGGGCEECSSTTTCCEEEE--EET--TEEEEEESSCBCTTCBCEEEECHHH
T ss_pred ceEEeEEecCCcccCCcEEE--EEC--CEEEEEECcccCCCCEEEEecCHHH
Confidence 99999999996 687653 233 5899999999999999999999654
No 20
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens}
Probab=99.67 E-value=3.5e-17 Score=149.39 Aligned_cols=131 Identities=21% Similarity=0.172 Sum_probs=86.4
Q ss_pred ccEEEEEecCCCcEEEec-cccCCCceEEEEeeEEechhhHHHHHHHhhhcCCCceEEeeec--c--ceEEeecc--cCC
Q 019476 114 KKMKLVQTEKCGAGIVAD-EDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLGETNFYLCEIN--R--DMVIDATY--KGN 186 (340)
Q Consensus 114 ~~l~i~~t~~kG~GlfA~-~~I~~G~~I~ey~Geii~~~e~~~r~~~~~~~~~~~~y~~~l~--~--~~~IDa~~--~Gn 186 (340)
..++|.++...|.|||+. +.|++|+.+++|.|++++..++. ..|++.+. . ..+||+.. .||
T Consensus 72 ~~L~vr~S~i~~~Gv~~~~~~IpkGt~fGPY~Ge~~s~~ea~------------~~y~wei~~~~g~~~~IDgsde~~gN 139 (237)
T 3ray_A 72 QGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQISTQDKSA------------GFFSWLIVDKNNRYKSIDGSDETKAN 139 (237)
T ss_dssp TTEEEEECTTSCEEEEECSSCBCTTEEECCCCSEEECC-----------------CCEEEEECTTSCEEEEECCCTTTSC
T ss_pred CCeEEEEcCCCCcceEEEeCcCCCCCEEEecccEEcChHHcc------------ccceEEEEcCCCcEEEEecCCCCCCc
Confidence 468999999999999987 89999999999999999875431 12444442 2 35899997 799
Q ss_pred ccccccCCCC---CCcceeEEEECCeEEEEEEEcCCCCCCCeEEEecCCCcCCCCceeecCCCCCccccCCCCCCCCC
Q 019476 187 KSRYINHSCC---PNTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQFGADQDCHCGAAGCRRKLGAKPSKPKI 261 (340)
Q Consensus 187 ~aRfINHSC~---PN~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~~~~~~~C~Cgs~~Crg~l~~~~~~~~~ 261 (340)
++|||||+|. +|+... ..+ .+|.++|+|||.+||||+++|+..++ ....+.|++.-|++...+.+....+
T Consensus 140 WmRfVn~Ar~~~EqNL~A~--q~~--~~Iyy~a~RdI~pGeELlVwYg~~Y~-~~l~~~~~~~~~~~~~~~~k~~~~~ 212 (237)
T 3ray_A 140 WMRYVVISREEREQNLLAF--QHS--ERIYFRACRDIRPGEWLRVWYSEDYM-KRLHSMSQETIHRNLARGEKRLQRE 212 (237)
T ss_dssp GGGGCEECCCTTTCCEEEE--EET--TEEEEEESSCBCTTCBCEEEECHHHH-HHHCC--------------------
T ss_pred ceeEEEcCCCcccccceeE--EeC--CEEEEEEccccCCCCEEEEeeCHHHH-HHhcccccchhcccccchhhccccc
Confidence 9999999996 576553 233 58999999999999999999997654 3467888999998888665443333
No 21
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens}
Probab=99.55 E-value=1.3e-15 Score=130.91 Aligned_cols=102 Identities=8% Similarity=0.089 Sum_probs=77.0
Q ss_pred cEEEEEecCCCcEEEeccccCCCceEEEEeeEEechhhHHHHHHHhhhcCCCceEEeee------------ccceEEeec
Q 019476 115 KMKLVQTEKCGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLGETNFYLCEI------------NRDMVIDAT 182 (340)
Q Consensus 115 ~l~i~~t~~kG~GlfA~~~I~~G~~I~ey~Geii~~~e~~~r~~~~~~~~~~~~y~~~l------------~~~~~IDa~ 182 (340)
.++|. ..|+||||++.|++|+.+++|.|++++.+++.. ..|.+.+ +..++||++
T Consensus 24 ~L~i~---~~g~GVfA~~~IpkGt~fGPy~Ge~~~~~e~~~-----------~~~~~~v~~~d~~~~~~~~~~~~~iD~~ 89 (152)
T 3ihx_A 24 VLYID---RFLGGVFSKRRIPKRTQFGPVEGPLVRGSELKD-----------CYIHLKVSLDKGDRKERDLHEDLWFELS 89 (152)
T ss_dssp TEEEC---TTTCSEEESSCBCSSCEECCCCSCEECSTTCCS-----------SSCCCBC---------------CEECCC
T ss_pred ceEEe---ecCCeEEECceecCCCEEEeeccEEcCHHHhcc-----------CcceEEEEccccccccccCCccEEEEcc
Confidence 45553 358999999999999999999999999865311 1121111 135789998
Q ss_pred c--cCCccccccCCCC---CCcceeEEEECCeEEEEEEEcCCCCCCCeEEEecCCCc
Q 019476 183 Y--KGNKSRYINHSCC---PNTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQ 234 (340)
Q Consensus 183 ~--~Gn~aRfINHSC~---PN~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~ 234 (340)
. .||++|||||+|. +|+... .. ..++.+.|+|+|.+||||+++|+..+
T Consensus 90 ~~~~~NWmr~vn~a~~~~eqNl~a~--q~--~~~I~~~~~r~I~pGeELlv~Y~~~y 142 (152)
T 3ihx_A 90 DETLCNWMMFVRPAQNHLEQNLVAY--QY--GHHVYYTTIKNVEPKQELKVWYAASY 142 (152)
T ss_dssp CTTTSCGGGGCCBCCSTTTCCEEEE--EC--SSSEEEEESSCBCTTCBCCEEECHHH
T ss_pred CCCCCcceeeeeccCCccCCCcEEE--Ee--CCeEEEEEeeecCCCCEEEEechHHH
Confidence 6 5999999999997 677552 22 35789999999999999999998654
No 22
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.23 E-value=4e-11 Score=120.87 Aligned_cols=60 Identities=32% Similarity=0.547 Sum_probs=44.8
Q ss_pred ccccccCCCCCCcceeEEEECCe-----------EEEEEEEcCCCCCCCeEEEecCCCcCCC-----------CceeecC
Q 019476 187 KSRYINHSCCPNTEMQKWIIDGE-----------TRIGIFATRDIKKGENLTYDYQFVQFGA-----------DQDCHCG 244 (340)
Q Consensus 187 ~aRfINHSC~PN~~~~~~~~~g~-----------~ri~i~A~RdI~~GEELT~dY~~~~~~~-----------~~~C~Cg 244 (340)
.+.||||||.||+.+.. .++. .++.|+|+|||++|||||++|....+.. .|.|.|
T Consensus 200 ~~s~~NHSC~PN~~~~~--~~~~~~~~~~~~~~~~~~~v~A~rdI~~GEEltisY~~~~~~~~~R~~~L~~~~~F~C~C- 276 (490)
T 3n71_A 200 NLGLVNHDCWPNCTVIF--NNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYIDFLHLSEERRRQLKKQYYFDCSC- 276 (490)
T ss_dssp TGGGCEECSSCSEEEEE--ECCCCSSSCCCGGGSCEEEEEESSCBCTTCBCEECSSCSCSCHHHHHHHHHHHHSSCCCC-
T ss_pred hhhhcccCCCCCeeEEe--cCCccccccccccccceEEEEECCCCCCCCEEEEeecCCCCCHHHHHHHHHCCCCeEeeC-
Confidence 35688999999997633 3321 3899999999999999999998765532 367777
Q ss_pred CCCCcc
Q 019476 245 AAGCRR 250 (340)
Q Consensus 245 s~~Crg 250 (340)
..|..
T Consensus 277 -~~C~~ 281 (490)
T 3n71_A 277 -EHCQK 281 (490)
T ss_dssp -HHHHH
T ss_pred -CCCCC
Confidence 45644
No 23
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.09 E-value=4.2e-10 Score=111.76 Aligned_cols=54 Identities=26% Similarity=0.511 Sum_probs=42.5
Q ss_pred ccccccCCCCCCcceeEEEECCeEEEEEEEcCCCCCCCeEEEecCCCcCCC-----------CceeecC
Q 019476 187 KSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQFGA-----------DQDCHCG 244 (340)
Q Consensus 187 ~aRfINHSC~PN~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~~~~-----------~~~C~Cg 244 (340)
.+.|+||||.||+.+. +.+ ..+.|+|+|||++|||||++|....++. .|.|.|.
T Consensus 201 ~~s~~NHsC~PN~~~~--~~~--~~~~~~a~r~I~~Geel~i~Y~~~~~~~~~R~~~L~~~~~F~C~C~ 265 (433)
T 3qww_A 201 DVALMNHSCCPNVIVT--YKG--TLAEVRAVQEIHPGDEVFTSYIDLLYPTEDRNDRLRDSYFFTCECR 265 (433)
T ss_dssp TGGGSEECSSCSEEEE--EET--TEEEEEESSCBCTTCEEEECCSCTTSCHHHHHHHHHHHHSCCCCSH
T ss_pred cccccCCCCCCCceEE--EcC--CEEEEEeccCcCCCCEEEEeecCCcCCHHHHHHHHhCcCCEEeECC
Confidence 4568999999998663 233 3689999999999999999999765431 4788884
No 24
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.83 E-value=1.5e-09 Score=107.55 Aligned_cols=47 Identities=32% Similarity=0.400 Sum_probs=38.6
Q ss_pred CccccccCCCCCCcceeEEEECCeEEEEEEEcCCCCCCCeEEEecCCCcCC
Q 019476 186 NKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQFG 236 (340)
Q Consensus 186 n~aRfINHSC~PN~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~~~ 236 (340)
..++|+||||.||+.+.. .+ .++.|+|+|||++|||||++|....+.
T Consensus 200 ~~~s~~NHsC~PN~~~~~--~~--~~~~~~a~r~I~~GeEl~isY~~~~~~ 246 (429)
T 3qwp_A 200 PSISLLNHSCDPNCSIVF--NG--PHLLLRAVRDIEVGEELTICYLDMLMT 246 (429)
T ss_dssp TTGGGCEECSSCSEEEEE--ET--TEEEEEECSCBCTTCEEEECCSCSSCC
T ss_pred hhhHhhCcCCCCCeEEEE--eC--CEEEEEEeeeECCCCEEEEEecCCCCC
Confidence 457799999999997642 22 478999999999999999999876554
No 25
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=97.03 E-value=0.00038 Score=69.18 Aligned_cols=42 Identities=21% Similarity=0.352 Sum_probs=34.7
Q ss_pred ccccccCCCCCCcceeEEEECCeEEEEEEEcCCCCCCCeEEEecCC
Q 019476 187 KSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQF 232 (340)
Q Consensus 187 ~aRfINHSC~PN~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~ 232 (340)
++-++||||.||+.+. .++ ..+.++|.|+|++||||+++||.
T Consensus 222 ~~D~~NH~~~~~~~~~---~~~-~~~~~~a~~~i~~Geei~~~YG~ 263 (449)
T 3qxy_A 222 AADILNHLANHNANLE---YSA-NCLRMVATQPIPKGHEIFNTYGQ 263 (449)
T ss_dssp TGGGCEECSSCSEEEE---ECS-SEEEEEESSCBCTTCEEEECCSS
T ss_pred cHHHhcCCCCCCeEEE---EeC-CeEEEEECCCcCCCchhhccCCC
Confidence 4568999999998653 333 36889999999999999999996
No 26
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=96.95 E-value=0.00043 Score=68.34 Aligned_cols=47 Identities=23% Similarity=0.374 Sum_probs=35.5
Q ss_pred ccccccCCCCCCcceeEEEECC-------eEEEEEEEcCCCCCCCeEEEecCCC
Q 019476 187 KSRYINHSCCPNTEMQKWIIDG-------ETRIGIFATRDIKKGENLTYDYQFV 233 (340)
Q Consensus 187 ~aRfINHSC~PN~~~~~~~~~g-------~~ri~i~A~RdI~~GEELT~dY~~~ 233 (340)
++-++||++.||.....|.+++ ...+.++|.|+|++||||+++||..
T Consensus 189 ~~D~~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~i~~Geei~~sYG~~ 242 (440)
T 2h21_A 189 MADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGEQVYIQYDLN 242 (440)
T ss_dssp STTSCEECTTCCCCCCEEEC----------CEEEEEESSCBCTTSBCEECSCTT
T ss_pred chHhhcCCCCcccccceeeecCcccccCCCceEEEEECCCCCCCCEEEEeCCCC
Confidence 4568999999986443444332 4578999999999999999999964
No 27
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=96.34 E-value=0.0022 Score=64.47 Aligned_cols=43 Identities=21% Similarity=0.206 Sum_probs=32.9
Q ss_pred ccccccCCCCCCcceeEEEECCeEEEEEEEcCCCCCCCeEEEecCC
Q 019476 187 KSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQF 232 (340)
Q Consensus 187 ~aRfINHSC~PN~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~ 232 (340)
++-++||||.||.. .|.. ....+.++|.|+|++||||+++||.
T Consensus 272 ~~Dm~NH~~~~~~~--~~~~-~~~~~~~~a~~~i~~Geei~isYG~ 314 (497)
T 3smt_A 272 LWDMCNHTNGLITT--GYNL-EDDRCECVALQDFRAGEQIYIFYGT 314 (497)
T ss_dssp TGGGCEECSCSEEE--EEET-TTTEEEEEESSCBCTTCEEEECCCS
T ss_pred hHHhhcCCCcccce--eeec-cCCeEEEEeCCccCCCCEEEEeCCC
Confidence 35589999999642 1222 2346788999999999999999985
No 28
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=86.59 E-value=0.57 Score=45.73 Aligned_cols=35 Identities=20% Similarity=0.233 Sum_probs=29.7
Q ss_pred cccEEEEEecCCCcEEEeccccCCCceEEEEeeEE
Q 019476 113 VKKMKLVQTEKCGAGIVADEDIKRGEFVIEYVGEV 147 (340)
Q Consensus 113 ~~~l~i~~t~~kG~GlfA~~~I~~G~~I~ey~Gei 147 (340)
...++.+.++++|.||+|+++|++|++|..-...+
T Consensus 4 ~~~i~~~~~~~~GR~l~Atr~i~~Ge~Il~e~P~~ 38 (429)
T 3qwp_A 4 PLKVEKFATANRGNGLRAVTPLRPGELLFRSDPLA 38 (429)
T ss_dssp CCSEEEEECSSSSEEEEESSCBCTTCEEEEECCSE
T ss_pred ccceeecccCCCCCeEEeCCCCCCCCEEEecCCce
Confidence 35688888999999999999999999998755544
No 29
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=76.46 E-value=1.8 Score=43.22 Aligned_cols=31 Identities=26% Similarity=0.336 Sum_probs=27.4
Q ss_pred cEEEEEecCCCcEEEeccccCCCceEEEEee
Q 019476 115 KMKLVQTEKCGAGIVADEDIKRGEFVIEYVG 145 (340)
Q Consensus 115 ~l~i~~t~~kG~GlfA~~~I~~G~~I~ey~G 145 (340)
.+++...++.|+||+|+++|++|+.|+..--
T Consensus 94 ~v~i~~~~~~GrGl~A~~dI~~ge~ll~IP~ 124 (497)
T 3smt_A 94 GFEMVNFKEEGFGLRATRDIKAEELFLWVPR 124 (497)
T ss_dssp TEEEEEETTTEEEEEESSCBCTTCEEEEEEG
T ss_pred ceEEEEcCCCccEEEEcccCCCCCEEEEcCH
Confidence 5888888999999999999999999987643
No 30
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=65.70 E-value=3.8 Score=40.15 Aligned_cols=32 Identities=25% Similarity=0.435 Sum_probs=25.8
Q ss_pred cEEEEEe-cCCCcEEEeccccCCCceEEEEeeE
Q 019476 115 KMKLVQT-EKCGAGIVADEDIKRGEFVIEYVGE 146 (340)
Q Consensus 115 ~l~i~~t-~~kG~GlfA~~~I~~G~~I~ey~Ge 146 (340)
+++|... +..|+||+|+++|++|+.|+..--.
T Consensus 39 ~v~i~~~~~~~G~Gv~A~~dI~~ge~ll~IP~~ 71 (449)
T 3qxy_A 39 KVAVSRQGTVAGYGMVARESVQAGELLFVVPRA 71 (449)
T ss_dssp TEEEESSSCSSSSEEEESSCBCTTCEEEEEEGG
T ss_pred ceEEEecCCCceEEEEECCCCCCCCEEEEeCcH
Confidence 5677654 4789999999999999999876443
No 31
>1wvo_A Sialic acid synthase; antifreeze protein like domain, N-acetylneuraminic acid phosphate synthase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.79 E-value=5.4 Score=29.58 Aligned_cols=18 Identities=33% Similarity=0.361 Sum_probs=15.5
Q ss_pred EEEEEcCCCCCCCeEEEe
Q 019476 212 IGIFATRDIKKGENLTYD 229 (340)
Q Consensus 212 i~i~A~RdI~~GEELT~d 229 (340)
-.++|.+||++||-||-+
T Consensus 7 rslvA~rdI~~Gevit~~ 24 (79)
T 1wvo_A 7 GSVVAKVKIPEGTILTMD 24 (79)
T ss_dssp CEEEESSCBCTTCBCCGG
T ss_pred EEEEEeCccCCCCCcCHH
Confidence 358999999999999854
No 32
>3bw1_A SMX4 protein, U6 snRNA-associated SM-like protein LSM3; RNA-binding protein, SM protein, ring, HOMO octamer, mRNA processing; 2.50A {Saccharomyces cerevisiae}
Probab=49.91 E-value=6.2 Score=30.27 Aligned_cols=38 Identities=11% Similarity=0.093 Sum_probs=32.6
Q ss_pred CCCCCCCccccccceeEeecCCCCcceeeEEeeehhcc
Q 019476 288 PYNQRQICPQCCIGKVIRISHPKNESSFGIIRRFDEYS 325 (340)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (340)
.|..+...+..+++.++.|.-..++.+.|+++-||++-
T Consensus 7 ~~~~p~~~L~~~i~k~V~V~Lk~gr~~~G~L~~fD~~m 44 (96)
T 3bw1_A 7 HMETPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHC 44 (96)
T ss_dssp CCCCHHHHHGGGTTSEEEEEEGGGCEEEEEEEEECTTC
T ss_pred hhhhHHHHHHHHCCCeEEEEECCCcEEEEEEEEECCCC
Confidence 45666678889999999999999999889999999764
No 33
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=48.80 E-value=11 Score=36.36 Aligned_cols=24 Identities=29% Similarity=0.495 Sum_probs=20.6
Q ss_pred CCCcEEEeccccCCCceEEEEeeE
Q 019476 123 KCGAGIVADEDIKRGEFVIEYVGE 146 (340)
Q Consensus 123 ~kG~GlfA~~~I~~G~~I~ey~Ge 146 (340)
..|+||+|+++|++|+.|+..--.
T Consensus 31 ~~GrGl~A~~~I~~ge~ll~IP~~ 54 (440)
T 2h21_A 31 TEGLGLVALKDISRNDVILQVPKR 54 (440)
T ss_dssp TTEEEEEESSCBCTTEEEEEEEGG
T ss_pred CCCCEEEEcccCCCCCEEEEeChh
Confidence 469999999999999999876444
No 34
>4emg_A Probable U6 snRNA-associated SM-like protein LSM3; SM fold, mRNA decay, LSM proteins, RNA binding protein; 2.70A {Schizosaccharomyces pombe}
Probab=44.87 E-value=9.8 Score=28.99 Aligned_cols=37 Identities=8% Similarity=0.113 Sum_probs=30.5
Q ss_pred CCCCCCccccccceeEeecCCCCcceeeEEeeehhcc
Q 019476 289 YNQRQICPQCCIGKVIRISHPKNESSFGIIRRFDEYS 325 (340)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (340)
...+...++.+++..+.|+...++.+.|+++.||++-
T Consensus 7 ~~~Pl~lL~~~~~~~V~V~l~~gr~~~G~L~~~D~~m 43 (93)
T 4emg_A 7 VAEPLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHL 43 (93)
T ss_dssp --CTTHHHHTTTTSEEEEEETTTEEEEEEEEEECTTC
T ss_pred cCCCHHHHHHhCCCEEEEEECCCcEEEEEEEEECCcc
Confidence 3456667888999999999998998889999999864
No 35
>1n9r_A SMF, small nuclear ribonucleoprotein F, snRNP-F, SM protein F; heptamer, translation; 2.80A {Saccharomyces cerevisiae} SCOP: b.38.1.1 PDB: 1n9s_A
Probab=42.58 E-value=15 Score=27.91 Aligned_cols=35 Identities=11% Similarity=0.088 Sum_probs=26.9
Q ss_pred CCCCccccccceeEeecCCCC-cceeeEEeeehhcc
Q 019476 291 QRQICPQCCIGKVIRISHPKN-ESSFGIIRRFDEYS 325 (340)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 325 (340)
.+...+..+++.+|.|+...+ +.+.|+++.||++-
T Consensus 21 ~P~~~L~~~i~k~V~V~Lk~g~~~~~G~L~~~D~~M 56 (93)
T 1n9r_A 21 NPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYF 56 (93)
T ss_dssp -----CGGGTTSEEEEEESSTTEEEEEEEEECCTTT
T ss_pred ChHHHHHHhCCCEEEEEEcCCCEEEEEEEEEEcccc
Confidence 445578889999999999888 88779999999874
No 36
>1mgq_A SM-like protein; LSM, RNA-binding, archea, RNA binding protein; 1.70A {Methanothermobacterthermautotrophicus} SCOP: b.38.1.1 PDB: 1i81_A 1loj_A* 1jbm_A 1jri_A
Probab=41.20 E-value=14 Score=27.25 Aligned_cols=38 Identities=11% Similarity=0.093 Sum_probs=31.3
Q ss_pred CCCCCCccccccceeEeecCCCCcceeeEEeeehhccc
Q 019476 289 YNQRQICPQCCIGKVIRISHPKNESSFGIIRRFDEYSR 326 (340)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (340)
...+...+..+++..+.|+-..++.+.|+++.||++--
T Consensus 13 ~~~P~~~L~~~~~~~V~V~Lk~g~~~~G~L~~~D~~mN 50 (83)
T 1mgq_A 13 VQRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMN 50 (83)
T ss_dssp TTCTTHHHHHTTTSEEEEEETTTEEEEEEEEEECTTCC
T ss_pred CcChHHHHHHhCCCEEEEEEcCCcEEEEEEEEECCCce
Confidence 34455578889999999999999888899999998743
No 37
>1ljo_A Archaeal SM-like protein AF-SM2; snRNP, core snRNP domain, RNA binding protein, unknown F; 1.95A {Archaeoglobus fulgidus} SCOP: b.38.1.1
Probab=39.22 E-value=11 Score=27.43 Aligned_cols=37 Identities=19% Similarity=0.339 Sum_probs=30.0
Q ss_pred CCCCCCccccccceeEeecCCCC-cceeeEEeeehhcc
Q 019476 289 YNQRQICPQCCIGKVIRISHPKN-ESSFGIIRRFDEYS 325 (340)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 325 (340)
|.++...+..+++..+.|.-..+ +.+.|+++.||++-
T Consensus 3 m~~P~~~L~~~~~~~v~V~lk~g~~~~~G~L~~~D~~m 40 (77)
T 1ljo_A 3 MVLPNQMVKSMVGKIIRVEMKGEENQLVGKLEGVDDYM 40 (77)
T ss_dssp CCCHHHHHHHTTTSEEEEEETTCSSEEEEEEEEECTTC
T ss_pred ccchHHHHHHHCCCEEEEEEeCCCEEEEEEEEEECCcc
Confidence 44566677888999999998888 77779999999774
No 38
>1i4k_A Putative snRNP SM-like protein; core snRNP domain, RNA binding protein; HET: CIT; 2.50A {Archaeoglobus fulgidus} SCOP: b.38.1.1 PDB: 1i5l_A*
Probab=36.07 E-value=21 Score=25.78 Aligned_cols=34 Identities=6% Similarity=-0.037 Sum_probs=28.3
Q ss_pred CCCccccccceeEeecCCCCcceeeEEeeehhcc
Q 019476 292 RQICPQCCIGKVIRISHPKNESSFGIIRRFDEYS 325 (340)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (340)
+...++.+++.++.|+-..++.+.|+++.||++-
T Consensus 5 P~~~L~~~~~~~V~V~L~~g~~~~G~L~~~D~~m 38 (77)
T 1i4k_A 5 PLDVLNRSLKSPVIVRLKGGREFRGTLDGYDIHM 38 (77)
T ss_dssp HHHHHHTTTTSEEEEEETTSCEEEEEEEEECTTC
T ss_pred HHHHHHHhCCCEEEEEEcCCCEEEEEEEEEcCCC
Confidence 3345677889999999999998889999999764
No 39
>1t2y_A Metallothionein, MT; protein fold, no secondary structural elements, metal binding protein; NMR {Synthetic} SCOP: g.46.1.1
Probab=35.45 E-value=21 Score=20.79 Aligned_cols=17 Identities=41% Similarity=1.183 Sum_probs=10.3
Q ss_pred ccccCCCCCCCCCCCCCCc
Q 019476 68 CSCTASPGSSGVCDRDCHC 86 (340)
Q Consensus 68 C~C~~~~~~~~~C~~~C~c 86 (340)
|.|.. .+++.|+.+|.|
T Consensus 3 CgCs~--tgtC~Cg~~CsC 19 (26)
T 1t2y_A 3 CGCSG--ASSCNCGSGCSC 19 (26)
T ss_dssp CSCSS--TTTCCCSSSCCS
T ss_pred cccCC--CccccCCCCccc
Confidence 56665 445666666665
No 40
>4emk_A U6 snRNA-associated SM-like protein LSM5; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_A
Probab=33.70 E-value=12 Score=28.66 Aligned_cols=36 Identities=19% Similarity=0.266 Sum_probs=29.9
Q ss_pred CCCCCccccccceeEeecCCCCcceeeEEeeehhcc
Q 019476 290 NQRQICPQCCIGKVIRISHPKNESSFGIIRRFDEYS 325 (340)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (340)
.++...+..+++..|.|....++.+.|+++.||++-
T Consensus 19 ~~Pl~lL~~~l~k~V~V~Lk~gr~~~G~L~gfD~~m 54 (94)
T 4emk_A 19 ILPLELIDKCIGSNLWVIMKSEREFAGTLVGFDDYV 54 (94)
T ss_dssp -CHHHHHHHTTTSEEEEEESSSEEEEEEEEEECTTC
T ss_pred ccCHHHHHHHcCCeEEEEECCCcEEEEEEEEEcccC
Confidence 344557788999999999999999889999999874
No 41
>1i8f_A Putative snRNP SM-like protein; beta barrel-like SMAP monomers form 35-stranded beta-sheet I heptamer, structural genomics; 1.75A {Pyrobaculum aerophilum} SCOP: b.38.1.1 PDB: 1lnx_A*
Probab=32.62 E-value=12 Score=27.50 Aligned_cols=36 Identities=25% Similarity=0.290 Sum_probs=29.7
Q ss_pred CCCCCccccccceeEeecCCCCcceeeEEeeehhcc
Q 019476 290 NQRQICPQCCIGKVIRISHPKNESSFGIIRRFDEYS 325 (340)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (340)
..+...+..+++.++.|+-..++.+.|+++.||++-
T Consensus 10 ~~P~~~L~~~~~~~V~V~l~~g~~~~G~L~~~D~~m 45 (81)
T 1i8f_A 10 ATLGATLQDSIGKQVLVKLRDSHEIRGILRSFDQHV 45 (81)
T ss_dssp CCHHHHHHTTTTSEEEEEEGGGEEEEEEEEEECTTC
T ss_pred cchHHHHHHHCCCeEEEEEcCCcEEEEEEEEEcCCC
Confidence 344556788899999999988888889999999774
No 42
>2lua_A Protein MALE-specific lethal-2; DNA binding protein, metal binding; NMR {Drosophila melanogaster}
Probab=31.99 E-value=31 Score=23.45 Aligned_cols=40 Identities=35% Similarity=0.834 Sum_probs=27.2
Q ss_pred CCcccccCCCCCC--CCC-CCCCCccceeeeCCCCCCCCCCCCCc
Q 019476 65 GIFCSCTASPGSS--GVC-DRDCHCGMLLSSCSSGCKCGNSCLNK 106 (340)
Q Consensus 65 ~~~C~C~~~~~~~--~~C-~~~C~c~~~~~eC~~~C~C~~~C~Nr 106 (340)
...|.|......+ ..| +..|+|..-...|. +|.|- .|.|.
T Consensus 4 k~~CrCG~~~~~~~~~TC~~~RCpCY~~~~sC~-~C~C~-GCkNP 46 (52)
T 2lua_A 4 KPKCRCGISGSSNTLTTCRNSRCPCYKSYNSCA-GCHCV-GCKNP 46 (52)
T ss_dssp CCCCCBTTBSCCCSSSTTTSTTCHHHHTTCCCS-SCCCS-SCCCS
T ss_pred CcccccCcccCCCCceeEcCCccceecCCCccC-CCEec-CcCCC
Confidence 3458886543222 235 67899998888897 58886 48885
No 43
>1d3b_B Protein (small nuclear ribonucleoprotein associat B); snRNP, splicing, core snRNP domain, systemic lupus eryth SLE, RNA binding protein; HET: CIT; 2.00A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_A 2y9b_A 2y9c_A 2y9d_A
Probab=30.22 E-value=34 Score=25.48 Aligned_cols=33 Identities=15% Similarity=0.066 Sum_probs=28.0
Q ss_pred CccccccceeEeecCCCCcceeeEEeeehhccc
Q 019476 294 ICPQCCIGKVIRISHPKNESSFGIIRRFDEYSR 326 (340)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (340)
..+..+++..++|.-..++.+.|+++-||++--
T Consensus 7 ~~L~~~~~k~V~V~l~~gr~~~G~L~~~D~~mN 39 (91)
T 1d3b_B 7 SKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMN 39 (91)
T ss_dssp CCCGGGTTSEEEEEETTCCEEEEEEEECCTTCC
T ss_pred HHHHHHcCCcEEEEECCCeEEEEEEEEECCCCe
Confidence 456778999999999999988899999997743
No 44
>1h64_1 SnRNP SM-like protein; SM fold, spliceosome, snRNP core; 1.9A {Pyrococcus abyssi} SCOP: b.38.1.1 PDB: 1m8v_A*
Probab=29.69 E-value=29 Score=24.91 Aligned_cols=33 Identities=12% Similarity=-0.055 Sum_probs=27.7
Q ss_pred CCccccccceeEeecCCCCcceeeEEeeehhcc
Q 019476 293 QICPQCCIGKVIRISHPKNESSFGIIRRFDEYS 325 (340)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (340)
...+..+++..+.|.-..++.+.|+++.||.+-
T Consensus 6 ~~~L~~~~~~~V~V~l~~g~~~~G~L~~~D~~m 38 (75)
T 1h64_1 6 LDVIHRSLDKDVLVILKKGFEFRGRLIGYDIHL 38 (75)
T ss_dssp HHHHHTTTTSEEEEEETTSEEEEEEEEEECTTC
T ss_pred HHHHHHHCCCEEEEEECCCCEEEEEEEEEeCCC
Confidence 345677889999999998988889999999764
No 45
>4emk_B U6 snRNA-associated SM-like protein LSM6; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_B
Probab=28.58 E-value=33 Score=24.65 Aligned_cols=31 Identities=26% Similarity=0.295 Sum_probs=26.8
Q ss_pred ccccccceeEeecCCCCcceeeEEeeehhcc
Q 019476 295 CPQCCIGKVIRISHPKNESSFGIIRRFDEYS 325 (340)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (340)
.++.+++..+.|+-..++.+.|+++.||.+-
T Consensus 8 ~L~~~~~k~V~V~Lk~g~~~~G~L~~~D~~m 38 (75)
T 4emk_B 8 FLNKVIGKKVLIRLSSGVDYKGILSCLDGYM 38 (75)
T ss_dssp HHHHTTTSEEEEECTTSCEEEEEEEEECTTC
T ss_pred HHHHhCCCeEEEEEcCCcEEEEEEEEEcCcc
Confidence 4677889999999998888889999999864
No 46
>3k3s_A Altronate hydrolase; structural genomics, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 2.15A {Shigella flexneri 2a str}
Probab=26.64 E-value=36 Score=26.66 Aligned_cols=16 Identities=25% Similarity=0.468 Sum_probs=13.5
Q ss_pred EEEcCCCCCCCeEEEe
Q 019476 214 IFATRDIKKGENLTYD 229 (340)
Q Consensus 214 i~A~RdI~~GEELT~d 229 (340)
.+|++||++||+|+++
T Consensus 34 aVAl~~L~aG~~v~~~ 49 (105)
T 3k3s_A 34 AVALADLAEGTEVSVD 49 (105)
T ss_dssp EEESSCBCTTCEEEET
T ss_pred EEecCccCCCCEEeeC
Confidence 5789999999999863
No 47
>4emh_A Probable U6 snRNA-associated SM-like protein LSM4; SM fold, mRNA decay, PRE-mRNA splicing, LSM proteins, RNA BI protein; 2.20A {Schizosaccharomyces pombe}
Probab=26.40 E-value=40 Score=26.21 Aligned_cols=34 Identities=18% Similarity=0.213 Sum_probs=22.7
Q ss_pred CCCccccccceeEeecCCCCcceeeEEeeehhcc
Q 019476 292 RQICPQCCIGKVIRISHPKNESSFGIIRRFDEYS 325 (340)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (340)
+...++.+++..|.|+...++.+.|++..||.+-
T Consensus 17 p~~lL~~~igk~V~V~Lk~G~~~~G~L~~~D~~M 50 (105)
T 4emh_A 17 PLTLLNATQGRPILVELKNGETFNGHLENCDNYM 50 (105)
T ss_dssp ---------CCEEEEEETTSCEEEEEEEEECTTC
T ss_pred HHHHHHHhCCCEEEEEECCCCEEEEEEEEEcCCc
Confidence 3447889999999999998888889999999864
No 48
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=26.25 E-value=27 Score=27.17 Aligned_cols=20 Identities=30% Similarity=0.589 Sum_probs=16.5
Q ss_pred EEEEEEcCCCCCCCeEEEecC
Q 019476 211 RIGIFATRDIKKGENLTYDYQ 231 (340)
Q Consensus 211 ri~i~A~RdI~~GEELT~dY~ 231 (340)
-.++||.++|++||-|. .|.
T Consensus 15 G~GvfA~~~I~~G~~I~-ey~ 34 (119)
T 1n3j_A 15 GYGVFARKSFEKGELVE-ECL 34 (119)
T ss_dssp CCEEEECCCBCSCEEEC-CCC
T ss_pred eeEEEECCcCCCCCEEE-Eee
Confidence 47899999999999886 453
No 49
>2fwk_A U6 snRNA-associated SM-like protein LSM5; structural genomics, structural genomics consortium, SGC, DNA binding protein; 2.14A {Cryptosporidium parvum} SCOP: b.38.1.1 PDB: 3pgg_A
Probab=25.86 E-value=16 Score=29.24 Aligned_cols=38 Identities=26% Similarity=0.380 Sum_probs=31.4
Q ss_pred CCCCCCCccccccceeEeecCCCCcceeeEEeeehhcc
Q 019476 288 PYNQRQICPQCCIGKVIRISHPKNESSFGIIRRFDEYS 325 (340)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (340)
.+..+...+..+++.+|.|....++.+.|+++.||++-
T Consensus 25 ~~~~Pl~lL~~~l~k~V~V~Lk~Gr~~~G~L~~fD~~m 62 (121)
T 2fwk_A 25 NIILPLALIDKCIGNRIYVVMKGDKEFSGVLRGFDEYV 62 (121)
T ss_dssp CCCCHHHHHHHTBTSBCEEEETTTEEECCEEEEECTTC
T ss_pred cccCcHHHHHHHcCCeEEEEECCCcEEEEEEEEEcccC
Confidence 44455567788999999999999999889999999763
No 50
>3s6n_F Small nuclear ribonucleoprotein F; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_F 2y9c_F 2y9d_F 3cw1_F 3pgw_F* 2y9a_F
Probab=25.65 E-value=31 Score=25.69 Aligned_cols=34 Identities=15% Similarity=0.085 Sum_probs=28.9
Q ss_pred CCCccccccceeEeecCCCCcceeeEEeeehhcc
Q 019476 292 RQICPQCCIGKVIRISHPKNESSFGIIRRFDEYS 325 (340)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (340)
+...++.+++..+.|+...++.+.|+++.||.+-
T Consensus 7 P~~~L~~~~~k~V~V~Lk~g~~~~G~L~~~D~~m 40 (86)
T 3s6n_F 7 PKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYM 40 (86)
T ss_dssp HHHHHHHHTTSEEEEEETTSCEEEEEEEEECTTC
T ss_pred cHHHHHHhCCCeEEEEEcCCeEEEEEEEEEcCce
Confidence 3446788999999999999988889999999864
No 51
>1th7_A SnRNP-2, small nuclear riboprotein protein; archaea, SM protein, SM fold, SS-SM1, RNA binding protein; 1.68A {Sulfolobus solfataricus} SCOP: b.38.1.1
Probab=25.43 E-value=29 Score=25.35 Aligned_cols=33 Identities=12% Similarity=0.257 Sum_probs=27.8
Q ss_pred CCccccccceeEeecCCCCcceeeEEeeehhcc
Q 019476 293 QICPQCCIGKVIRISHPKNESSFGIIRRFDEYS 325 (340)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (340)
...++.+++..+.|.-..++.+.|+++.||++-
T Consensus 11 ~~~L~~~~~~~V~V~l~~g~~~~G~L~~~D~~m 43 (81)
T 1th7_A 11 HKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHM 43 (81)
T ss_dssp HHHHHHHTTSEEEEEETTTEEEEEEEEEECTTC
T ss_pred HHHHHHhCCCeEEEEEcCCcEEEEEEEEEcCCC
Confidence 346677889999999988888889999999774
No 52
>4emk_C U6 snRNA-associated SM-like protein LSM7; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_C
Probab=24.74 E-value=45 Score=26.24 Aligned_cols=33 Identities=15% Similarity=0.202 Sum_probs=23.7
Q ss_pred CCccccccceeEeecCCCCcceeeEEeeehhcc
Q 019476 293 QICPQCCIGKVIRISHPKNESSFGIIRRFDEYS 325 (340)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (340)
...+..+++..|+|.-..++.+.|+++.||.+-
T Consensus 25 i~~L~~~l~k~V~V~L~dGr~~~G~L~~fD~~m 57 (113)
T 4emk_C 25 ILDLSRYQDQRIQATFTGGRQITGILKGFDQLM 57 (113)
T ss_dssp -------CCSEEEEEETTSCEEEEEEEEECTTC
T ss_pred HHHHHHHcCCcEEEEEeCCeEEEEEEEEEcCcc
Confidence 346777899999999999999889999999864
No 53
>3s6n_G Small nuclear ribonucleoprotein G; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_G 2y9c_G 2y9d_G 3cw1_G 3pgw_G* 2y9a_G
Probab=24.14 E-value=45 Score=23.99 Aligned_cols=32 Identities=19% Similarity=0.259 Sum_probs=22.5
Q ss_pred CccccccceeEeecCCCCcceeeEEeeehhcc
Q 019476 294 ICPQCCIGKVIRISHPKNESSFGIIRRFDEYS 325 (340)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (340)
..+...++..+.|.-..++.+.|+++.||.+-
T Consensus 7 ~~L~~~~~k~V~V~Lk~gr~~~G~L~~~D~~m 38 (76)
T 3s6n_G 7 PELKKFMDKKLSLKLNGGRHVQGILRGFDPFM 38 (76)
T ss_dssp -------CCEEEEEETTTEEEEEEEEEECTTC
T ss_pred HHHHHhCCCeEEEEECCCcEEEEEEEEECCcc
Confidence 35778899999999988888889999999764
No 54
>1b34_A Protein (small nuclear ribonucleoprotein SM D1); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_B 2y9b_B 2y9c_B 2y9d_B 3cw1_B 3pgw_X* 3s6n_A
Probab=22.87 E-value=29 Score=27.57 Aligned_cols=34 Identities=12% Similarity=-0.005 Sum_probs=28.2
Q ss_pred CCccccccceeEeecCCCCcceeeEEeeehhccc
Q 019476 293 QICPQCCIGKVIRISHPKNESSFGIIRRFDEYSR 326 (340)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (340)
+..++.++++.|.|+...++.+.|++..||++--
T Consensus 4 ~~~L~~~~gk~V~V~Lk~g~~~~G~L~~~D~~MN 37 (119)
T 1b34_A 4 VRFLMKLSHETVTIELKNGTQVHGTITGVDVSMN 37 (119)
T ss_dssp HHHHHTCTTCEEEEEETTCCEEEEEEEEECTTCC
T ss_pred HHHHHHhCCCEEEEEEcCCCEEEEEEEEEcccce
Confidence 3456778899999999888888899999998753
No 55
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=22.48 E-value=79 Score=23.27 Aligned_cols=39 Identities=10% Similarity=0.016 Sum_probs=32.4
Q ss_pred ccccceeEeecCCCCcceeeEEeeehhcccceeEEEeee
Q 019476 297 QCCIGKVIRISHPKNESSFGIIRRFDEYSRKHSMVRVSL 335 (340)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (340)
.--.|+-|=+.+.+++.|.|.|+.-+..+.+-.+.|.|-
T Consensus 26 ~f~eGeDVLarwsDGlfYLGTI~kV~~~~e~ClV~F~D~ 64 (79)
T 2m0o_A 26 RLWEGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDD 64 (79)
T ss_dssp CCCTTCEEEBCCTTSCCCEEEEEEEETTTTEEEEEETTS
T ss_pred eeccCCEEEEEecCCCEEeEEEEEeccCCCEEEEEEcCC
Confidence 344578888888899999999999999999889988653
No 56
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=21.67 E-value=97 Score=21.54 Aligned_cols=35 Identities=11% Similarity=0.053 Sum_probs=28.4
Q ss_pred ceeEeecCCCCcceeeEEeeehhcccceeEEEeee
Q 019476 301 GKVIRISHPKNESSFGIIRRFDEYSRKHSMVRVSL 335 (340)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (340)
|+-|-+.+...+.|.|.|...+.....-.++|.+-
T Consensus 7 GedVLarwsDG~fYlGtI~~V~~~~~~clV~F~D~ 41 (58)
T 4hcz_A 7 GQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDD 41 (58)
T ss_dssp TCEEEEECTTSCEEEEEEEEEETTTTEEEEEETTS
T ss_pred CCEEEEEecCCCEEeEEEEEEecCCCEEEEEEcCC
Confidence 56666777788888899999999888888888653
No 57
>3qii_A PHD finger protein 20; tudor domain, structural genomics, structural GE consortium, SGC, transcription regulator; 2.30A {Homo sapiens}
Probab=20.05 E-value=1e+02 Score=23.09 Aligned_cols=49 Identities=8% Similarity=-0.001 Sum_probs=27.7
Q ss_pred CCCCCCCCCCCccccccceeEeecCCCCccee-eEEeeehhcccceeEEEee
Q 019476 284 SSRPPYNQRQICPQCCIGKVIRISHPKNESSF-GIIRRFDEYSRKHSMVRVS 334 (340)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 334 (340)
+++.++........-.+|..+.-.| .+.+|+ |.|...+.. +.-+++|.+
T Consensus 8 ~~~~~~~~~~~~~~f~vGd~VlArW-~D~~yYPAkI~sV~~~-~~YtV~F~D 57 (85)
T 3qii_A 8 SSRENLYFQGGSSEFQINEQVLACW-SDCRFYPAKVTAVNKD-GTYTVKFYD 57 (85)
T ss_dssp -------------CCCTTCEEEEEC-TTSCEEEEEEEEECTT-SEEEEEETT
T ss_pred ccccccCcccCCcccccCCEEEEEe-CCCCEeeEEEEEECCC-CeEEEEEeC
Confidence 4555555444445556677777777 677767 999988887 678888876
Done!