Query 019479
Match_columns 340
No_of_seqs 392 out of 3640
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 16:44:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019479.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019479hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kkz_A Uncharacterized protein 99.9 7.9E-22 2.7E-26 175.3 20.5 176 81-258 14-197 (267)
2 3dtn_A Putative methyltransfer 99.9 5.6E-22 1.9E-26 172.6 18.2 156 102-258 33-215 (234)
3 3ujc_A Phosphoethanolamine N-m 99.9 8.9E-22 3E-26 174.4 19.3 162 98-261 41-210 (266)
4 4gek_A TRNA (CMO5U34)-methyltr 99.9 4E-22 1.4E-26 176.5 16.2 142 112-255 69-243 (261)
5 3l8d_A Methyltransferase; stru 99.9 1.7E-22 6E-27 176.6 13.6 143 113-257 53-200 (242)
6 3f4k_A Putative methyltransfer 99.9 1.2E-21 4.1E-26 172.9 18.9 162 95-258 28-197 (257)
7 2p7i_A Hypothetical protein; p 99.9 4.1E-22 1.4E-26 174.5 15.4 141 113-257 42-199 (250)
8 3hnr_A Probable methyltransfer 99.9 2E-21 6.9E-26 167.4 19.0 145 113-261 45-205 (220)
9 1vl5_A Unknown conserved prote 99.9 3.4E-21 1.2E-25 170.4 17.3 145 112-258 36-191 (260)
10 3ege_A Putative methyltransfer 99.9 1.5E-21 5E-26 173.1 14.2 169 79-258 4-179 (261)
11 3h2b_A SAM-dependent methyltra 99.9 3.6E-22 1.2E-26 170.0 9.8 141 114-259 42-184 (203)
12 3e23_A Uncharacterized protein 99.9 2E-21 6.9E-26 166.5 14.0 171 75-260 12-185 (211)
13 3bus_A REBM, methyltransferase 99.9 8.1E-21 2.8E-25 169.1 18.2 160 99-260 48-219 (273)
14 3dli_A Methyltransferase; PSI- 99.9 3.4E-21 1.1E-25 168.5 15.3 155 98-259 26-186 (240)
15 3dh0_A SAM dependent methyltra 99.9 3.7E-21 1.3E-25 165.7 15.3 145 112-260 36-184 (219)
16 3ou2_A SAM-dependent methyltra 99.9 2.9E-21 1E-25 165.9 14.6 143 112-258 45-206 (218)
17 4htf_A S-adenosylmethionine-de 99.9 2.4E-21 8.3E-26 173.8 14.6 144 113-258 68-233 (285)
18 3dlc_A Putative S-adenosyl-L-m 99.9 6.8E-21 2.3E-25 163.5 16.7 157 99-258 31-204 (219)
19 3mgg_A Methyltransferase; NYSG 99.9 5.3E-21 1.8E-25 170.6 16.4 147 111-257 35-198 (276)
20 1nkv_A Hypothetical protein YJ 99.9 5.7E-21 2E-25 168.4 16.4 160 96-258 20-188 (256)
21 1xxl_A YCGJ protein; structura 99.9 1.1E-20 3.9E-25 165.1 17.5 145 112-258 20-175 (239)
22 2o57_A Putative sarcosine dime 99.9 1.1E-20 3.8E-25 170.4 17.3 147 112-259 81-236 (297)
23 3bkw_A MLL3908 protein, S-aden 99.9 4.6E-21 1.6E-25 167.5 13.5 145 113-259 43-216 (243)
24 3vc1_A Geranyl diphosphate 2-C 99.8 3.1E-20 1.1E-24 168.8 18.7 156 102-259 106-271 (312)
25 2ex4_A Adrenal gland protein A 99.8 4.3E-21 1.5E-25 167.9 12.4 154 101-258 67-226 (241)
26 3gu3_A Methyltransferase; alph 99.8 1.7E-20 6E-25 168.2 16.1 156 101-257 10-190 (284)
27 3g5l_A Putative S-adenosylmeth 99.8 1.1E-20 3.8E-25 166.4 14.6 154 104-259 36-218 (253)
28 3sm3_A SAM-dependent methyltra 99.8 3.3E-20 1.1E-24 161.1 17.3 153 112-266 29-216 (235)
29 2p35_A Trans-aconitate 2-methy 99.8 4.3E-20 1.5E-24 162.9 17.9 149 100-252 21-185 (259)
30 2yqz_A Hypothetical protein TT 99.8 3.6E-20 1.2E-24 163.8 15.5 144 112-257 38-196 (263)
31 3i53_A O-methyltransferase; CO 99.8 2.7E-20 9.1E-25 170.7 14.9 153 103-259 160-323 (332)
32 3hem_A Cyclopropane-fatty-acyl 99.8 9.3E-20 3.2E-24 164.8 18.1 155 102-261 62-247 (302)
33 4fsd_A Arsenic methyltransfera 99.8 3.7E-20 1.3E-24 173.0 15.7 147 112-258 82-252 (383)
34 3p9c_A Caffeic acid O-methyltr 99.8 1.4E-20 4.8E-25 174.6 12.5 202 49-259 135-355 (364)
35 3reo_A (ISO)eugenol O-methyltr 99.8 1.2E-20 4E-25 175.5 11.7 201 49-258 137-356 (368)
36 3ccf_A Cyclopropane-fatty-acyl 99.8 1.1E-19 3.6E-24 162.6 17.5 142 112-258 56-211 (279)
37 1y8c_A S-adenosylmethionine-de 99.8 1.3E-20 4.5E-25 164.7 11.3 142 113-257 37-225 (246)
38 3pfg_A N-methyltransferase; N, 99.8 1.1E-20 3.6E-25 167.5 10.3 138 113-255 50-235 (263)
39 3ocj_A Putative exported prote 99.8 2.6E-20 9E-25 168.8 12.9 146 112-258 117-292 (305)
40 2aot_A HMT, histamine N-methyl 99.8 1.9E-20 6.5E-25 168.6 11.7 144 112-256 51-220 (292)
41 2gs9_A Hypothetical protein TT 99.8 9.1E-20 3.1E-24 156.0 15.1 127 113-248 36-171 (211)
42 1pjz_A Thiopurine S-methyltran 99.8 1.4E-20 4.8E-25 160.5 9.9 139 112-258 21-177 (203)
43 3gwz_A MMCR; methyltransferase 99.8 2.5E-20 8.6E-25 173.3 12.4 152 102-257 192-356 (369)
44 1xtp_A LMAJ004091AAA; SGPP, st 99.8 5.1E-20 1.7E-24 162.0 13.7 152 103-258 84-239 (254)
45 1vlm_A SAM-dependent methyltra 99.8 8.1E-20 2.8E-24 157.5 14.3 135 114-258 48-189 (219)
46 1kpg_A CFA synthase;, cyclopro 99.8 7.1E-19 2.4E-23 157.8 19.0 155 101-260 53-231 (287)
47 4a6d_A Hydroxyindole O-methylt 99.8 8.9E-20 3E-24 168.5 13.1 153 102-258 169-335 (353)
48 3e8s_A Putative SAM dependent 99.8 6.7E-20 2.3E-24 158.1 11.4 139 113-257 52-209 (227)
49 3i9f_A Putative type 11 methyl 99.8 7.4E-20 2.5E-24 151.2 11.2 136 112-260 16-151 (170)
50 3g07_A 7SK snRNA methylphospha 99.8 9.3E-20 3.2E-24 164.1 12.6 145 113-257 46-269 (292)
51 3lcc_A Putative methyl chlorid 99.8 2.2E-19 7.6E-24 156.3 14.0 139 113-260 66-210 (235)
52 3jwh_A HEN1; methyltransferase 99.8 1.8E-19 6.1E-24 155.0 12.9 140 113-252 29-187 (217)
53 3dp7_A SAM-dependent methyltra 99.8 1.2E-19 4.2E-24 168.3 12.5 143 113-257 179-342 (363)
54 3ggd_A SAM-dependent methyltra 99.8 5.1E-19 1.7E-23 155.0 15.5 144 111-258 54-220 (245)
55 2fk8_A Methoxy mycolic acid sy 99.8 7.1E-19 2.4E-23 160.2 17.0 156 100-260 78-257 (318)
56 4hg2_A Methyltransferase type 99.8 1.3E-19 4.4E-24 159.9 11.5 128 80-218 11-138 (257)
57 3jwg_A HEN1, methyltransferase 99.8 2.7E-19 9.4E-24 154.0 13.0 145 113-258 29-192 (219)
58 2ip2_A Probable phenazine-spec 99.8 6.3E-19 2.1E-23 161.7 15.9 153 101-258 157-323 (334)
59 3lst_A CALO1 methyltransferase 99.8 1.3E-19 4.5E-24 167.2 11.2 147 104-257 176-336 (348)
60 3bxo_A N,N-dimethyltransferase 99.8 9.9E-20 3.4E-24 158.6 9.5 102 112-218 39-144 (239)
61 3cc8_A Putative methyltransfer 99.8 1.7E-18 5.9E-23 149.6 17.3 141 112-258 31-186 (230)
62 1fp1_D Isoliquiritigenin 2'-O- 99.8 4.5E-20 1.6E-24 171.8 7.7 149 102-257 198-360 (372)
63 2kw5_A SLR1183 protein; struct 99.8 3.5E-19 1.2E-23 151.3 12.5 152 113-269 30-183 (202)
64 1qzz_A RDMB, aclacinomycin-10- 99.8 1.8E-19 6.1E-24 167.8 11.3 145 112-259 181-341 (374)
65 2gb4_A Thiopurine S-methyltran 99.8 6.9E-19 2.4E-23 154.8 14.3 139 112-258 67-228 (252)
66 3g2m_A PCZA361.24; SAM-depende 99.8 1.6E-19 5.4E-24 163.1 10.2 154 100-258 71-275 (299)
67 3mcz_A O-methyltransferase; ad 99.8 2E-18 7E-23 159.4 16.8 151 103-254 169-336 (352)
68 3d2l_A SAM-dependent methyltra 99.8 7.5E-19 2.6E-23 153.4 13.2 171 79-257 3-223 (243)
69 3bkx_A SAM-dependent methyltra 99.8 7E-19 2.4E-23 156.7 12.6 154 103-257 34-219 (275)
70 2i62_A Nicotinamide N-methyltr 99.8 4.8E-19 1.6E-23 156.7 11.1 147 112-260 55-242 (265)
71 1fp2_A Isoflavone O-methyltran 99.8 2.9E-19 1E-23 165.1 10.1 139 112-257 187-341 (352)
72 1ve3_A Hypothetical protein PH 99.8 7.6E-19 2.6E-23 151.8 11.6 144 113-259 38-217 (227)
73 2a14_A Indolethylamine N-methy 99.8 3.8E-19 1.3E-23 157.7 9.8 145 112-259 54-240 (263)
74 3g5t_A Trans-aconitate 3-methy 99.8 1.2E-18 4.3E-23 157.2 13.3 146 113-259 36-211 (299)
75 2r3s_A Uncharacterized protein 99.8 2.1E-18 7.2E-23 158.1 14.9 145 112-258 164-324 (335)
76 4e2x_A TCAB9; kijanose, tetron 99.8 1.9E-19 6.3E-24 170.2 6.7 157 99-258 94-254 (416)
77 2xvm_A Tellurite resistance pr 99.8 2.5E-18 8.6E-23 145.3 13.0 137 113-257 32-173 (199)
78 1ri5_A MRNA capping enzyme; me 99.8 9.3E-19 3.2E-23 157.5 10.8 147 112-259 63-252 (298)
79 1tw3_A COMT, carminomycin 4-O- 99.8 1E-18 3.5E-23 161.9 11.0 145 112-259 182-341 (360)
80 3thr_A Glycine N-methyltransfe 99.8 4.8E-19 1.6E-23 159.3 8.4 115 99-216 44-176 (293)
81 2g72_A Phenylethanolamine N-me 99.8 8E-19 2.7E-23 157.7 9.8 144 113-258 71-257 (289)
82 2qe6_A Uncharacterized protein 99.8 1.1E-17 3.7E-22 149.1 16.7 139 113-253 77-238 (274)
83 2avn_A Ubiquinone/menaquinone 99.8 1.4E-18 4.8E-23 153.7 10.4 138 113-258 54-214 (260)
84 3cgg_A SAM-dependent methyltra 99.8 1.8E-17 6.2E-22 139.3 16.5 128 112-257 45-175 (195)
85 2p8j_A S-adenosylmethionine-de 99.8 6.4E-19 2.2E-23 150.3 7.7 145 112-257 22-183 (209)
86 1x19_A CRTF-related protein; m 99.8 1.7E-17 5.7E-22 153.7 17.4 153 102-258 180-349 (359)
87 3e05_A Precorrin-6Y C5,15-meth 99.8 6.1E-17 2.1E-21 137.8 19.0 138 99-257 27-167 (204)
88 3ofk_A Nodulation protein S; N 99.7 7E-18 2.4E-22 144.8 12.4 132 112-254 50-185 (216)
89 1zg3_A Isoflavanone 4'-O-methy 99.7 1.1E-18 3.7E-23 161.6 7.8 139 113-258 193-348 (358)
90 2vdw_A Vaccinia virus capping 99.7 2.6E-18 8.8E-23 155.2 8.0 146 113-259 48-248 (302)
91 2zfu_A Nucleomethylin, cerebra 99.7 1.1E-17 3.8E-22 143.5 11.4 115 112-258 66-180 (215)
92 3m33_A Uncharacterized protein 99.7 1.9E-17 6.5E-22 143.3 12.9 133 97-258 34-168 (226)
93 3m70_A Tellurite resistance pr 99.7 1.8E-17 6E-22 148.6 11.6 137 113-257 120-260 (286)
94 3orh_A Guanidinoacetate N-meth 99.7 9.8E-19 3.4E-23 152.5 2.7 152 96-254 45-207 (236)
95 2b3t_A Protein methyltransfera 99.7 3.2E-17 1.1E-21 146.3 12.5 149 88-256 86-262 (276)
96 1wzn_A SAM-dependent methyltra 99.7 2.3E-17 7.9E-22 144.9 10.9 101 112-215 40-145 (252)
97 3mq2_A 16S rRNA methyltransfer 99.7 1.7E-17 5.8E-22 142.7 9.0 145 112-259 26-186 (218)
98 1yzh_A TRNA (guanine-N(7)-)-me 99.7 1.8E-16 6.1E-21 136.0 15.1 127 113-255 41-180 (214)
99 3q87_B N6 adenine specific DNA 99.7 1.3E-16 4.4E-21 131.9 13.7 119 113-258 23-150 (170)
100 4df3_A Fibrillarin-like rRNA/T 99.7 3.7E-16 1.3E-20 134.7 17.0 139 112-259 76-219 (233)
101 1fbn_A MJ fibrillarin homologu 99.7 4.2E-16 1.4E-20 135.2 17.6 138 105-259 67-215 (230)
102 3p2e_A 16S rRNA methylase; met 99.7 6.2E-17 2.1E-21 140.0 11.9 148 113-261 24-189 (225)
103 1zx0_A Guanidinoacetate N-meth 99.7 2E-17 6.7E-22 144.2 8.5 148 96-251 45-204 (236)
104 1xdz_A Methyltransferase GIDB; 99.7 1.5E-16 5.3E-21 138.9 13.8 129 112-258 69-203 (240)
105 3hm2_A Precorrin-6Y C5,15-meth 99.7 2E-16 6.7E-21 131.3 13.1 136 100-257 13-153 (178)
106 3njr_A Precorrin-6Y methylase; 99.7 6.2E-16 2.1E-20 131.7 15.8 134 100-257 43-180 (204)
107 4dzr_A Protein-(glutamine-N5) 99.7 9E-18 3.1E-22 143.5 4.2 150 91-257 8-192 (215)
108 2fca_A TRNA (guanine-N(7)-)-me 99.7 2.6E-16 8.9E-21 135.0 13.2 127 113-255 38-177 (213)
109 3g89_A Ribosomal RNA small sub 99.7 4E-16 1.4E-20 137.0 12.8 130 112-259 79-214 (249)
110 3evz_A Methyltransferase; NYSG 99.7 1.5E-15 5.1E-20 131.5 16.1 129 112-256 54-205 (230)
111 2pxx_A Uncharacterized protein 99.7 9.1E-16 3.1E-20 131.0 14.5 106 112-218 41-162 (215)
112 3grz_A L11 mtase, ribosomal pr 99.7 4.8E-16 1.6E-20 132.2 12.5 125 112-258 59-186 (205)
113 2ld4_A Anamorsin; methyltransf 99.7 1.9E-16 6.5E-21 131.5 9.1 120 112-257 11-134 (176)
114 1yb2_A Hypothetical protein TA 99.7 4.5E-16 1.5E-20 138.7 11.2 124 112-257 109-237 (275)
115 3mti_A RRNA methylase; SAM-dep 99.7 4.9E-16 1.7E-20 130.0 10.7 137 112-258 21-170 (185)
116 3bgv_A MRNA CAP guanine-N7 met 99.6 4.5E-16 1.5E-20 141.3 11.0 145 113-258 34-233 (313)
117 3fpf_A Mtnas, putative unchara 99.6 9.2E-16 3.1E-20 136.3 12.3 100 112-216 121-223 (298)
118 2pwy_A TRNA (adenine-N(1)-)-me 99.6 1.5E-15 5.2E-20 133.7 13.4 135 102-258 86-225 (258)
119 3htx_A HEN1; HEN1, small RNA m 99.6 1.4E-15 4.7E-20 150.0 14.3 146 113-260 721-900 (950)
120 1jsx_A Glucose-inhibited divis 99.6 1.7E-15 5.9E-20 128.8 13.2 121 113-257 65-188 (207)
121 1nt2_A Fibrillarin-like PRE-rR 99.6 3.4E-15 1.2E-19 127.6 14.8 133 112-259 56-197 (210)
122 1dus_A MJ0882; hypothetical pr 99.6 1.4E-15 4.8E-20 127.5 12.2 136 102-258 42-183 (194)
123 3giw_A Protein of unknown func 99.6 5.9E-16 2E-20 136.0 9.9 140 113-254 78-244 (277)
124 2yxd_A Probable cobalt-precorr 99.6 3.9E-15 1.3E-19 123.7 14.1 132 98-255 21-155 (183)
125 1p91_A Ribosomal RNA large sub 99.6 1.2E-15 4E-20 135.4 10.9 134 112-258 84-217 (269)
126 3bwc_A Spermidine synthase; SA 99.6 9.6E-16 3.3E-20 138.5 10.2 136 112-259 94-242 (304)
127 3lpm_A Putative methyltransfer 99.6 3.6E-15 1.2E-19 131.7 13.5 129 113-259 49-203 (259)
128 3iv6_A Putative Zn-dependent a 99.6 5E-15 1.7E-19 130.2 14.1 111 102-216 35-149 (261)
129 1af7_A Chemotaxis receptor met 99.6 2.9E-15 1E-19 132.8 12.7 102 113-214 105-251 (274)
130 3mb5_A SAM-dependent methyltra 99.6 2.7E-15 9.1E-20 132.0 12.3 136 102-260 83-225 (255)
131 1l3i_A Precorrin-6Y methyltran 99.6 3.4E-15 1.2E-19 124.9 12.3 132 97-251 18-154 (192)
132 3p9n_A Possible methyltransfer 99.6 1.3E-15 4.4E-20 128.0 9.4 105 113-218 44-156 (189)
133 3uwp_A Histone-lysine N-methyl 99.6 8.8E-16 3E-20 141.4 9.0 119 99-219 160-292 (438)
134 2h00_A Methyltransferase 10 do 99.6 5.3E-16 1.8E-20 136.6 7.2 158 99-258 50-239 (254)
135 3eey_A Putative rRNA methylase 99.6 6.8E-16 2.3E-20 130.4 7.5 139 112-258 21-174 (197)
136 3dxy_A TRNA (guanine-N(7)-)-me 99.6 1.4E-15 4.9E-20 130.8 9.3 104 113-216 34-151 (218)
137 2ipx_A RRNA 2'-O-methyltransfe 99.6 2.7E-15 9.2E-20 130.3 11.1 138 112-259 76-219 (233)
138 3hp7_A Hemolysin, putative; st 99.6 1.6E-15 5.6E-20 134.9 9.5 149 103-257 75-232 (291)
139 3ckk_A TRNA (guanine-N(7)-)-me 99.6 3.5E-15 1.2E-19 129.8 10.9 105 112-216 45-169 (235)
140 2nxc_A L11 mtase, ribosomal pr 99.6 2.1E-15 7.3E-20 132.8 9.6 125 112-258 119-245 (254)
141 3opn_A Putative hemolysin; str 99.6 3.8E-16 1.3E-20 135.6 4.0 145 103-258 27-185 (232)
142 3dmg_A Probable ribosomal RNA 99.6 1.2E-14 4.1E-19 135.1 14.1 135 113-258 233-374 (381)
143 2ozv_A Hypothetical protein AT 99.6 1.7E-14 6E-19 127.4 14.5 130 112-259 35-196 (260)
144 3sso_A Methyltransferase; macr 99.6 2E-15 6.8E-20 138.7 8.1 133 76-217 180-326 (419)
145 1o54_A SAM-dependent O-methylt 99.6 3.1E-14 1.1E-18 126.9 15.5 125 112-258 111-240 (277)
146 3id6_C Fibrillarin-like rRNA/T 99.6 5.8E-14 2E-18 121.3 16.6 138 112-259 75-218 (232)
147 1ej0_A FTSJ; methyltransferase 99.6 7.2E-15 2.5E-19 121.2 10.5 120 111-255 20-159 (180)
148 3lbf_A Protein-L-isoaspartate 99.6 1.5E-14 5.1E-19 123.4 12.8 109 100-217 65-176 (210)
149 2frn_A Hypothetical protein PH 99.6 1.6E-14 5.3E-19 128.9 12.8 126 112-253 124-253 (278)
150 3r0q_C Probable protein argini 99.6 8.7E-15 3E-19 136.1 11.3 113 98-214 49-168 (376)
151 1i9g_A Hypothetical protein RV 99.6 3.9E-14 1.3E-18 126.2 14.7 136 101-258 88-231 (280)
152 3fzg_A 16S rRNA methylase; met 99.6 2.1E-15 7.2E-20 124.5 5.7 139 112-260 48-190 (200)
153 3q7e_A Protein arginine N-meth 99.6 8.2E-15 2.8E-19 135.0 10.3 99 113-213 66-171 (349)
154 3bzb_A Uncharacterized protein 99.6 4.3E-14 1.5E-18 126.3 14.4 146 99-257 66-237 (281)
155 2fyt_A Protein arginine N-meth 99.6 8.8E-15 3E-19 134.3 9.6 108 102-212 54-168 (340)
156 2plw_A Ribosomal RNA methyltra 99.5 3.5E-14 1.2E-18 120.1 12.3 98 111-216 20-155 (201)
157 1g8a_A Fibrillarin-like PRE-rR 99.5 1.7E-13 5.8E-18 118.3 16.6 137 112-259 72-214 (227)
158 3kr9_A SAM-dependent methyltra 99.5 6.7E-14 2.3E-18 119.9 13.4 125 112-257 14-143 (225)
159 3lec_A NADB-rossmann superfami 99.5 5.8E-14 2E-18 120.5 12.8 126 112-257 20-149 (230)
160 3tma_A Methyltransferase; thum 99.5 1E-13 3.4E-18 128.0 15.3 145 92-257 183-339 (354)
161 1vbf_A 231AA long hypothetical 99.5 5.9E-14 2E-18 121.4 12.4 111 99-218 57-168 (231)
162 3u81_A Catechol O-methyltransf 99.5 5.6E-14 1.9E-18 120.9 12.0 105 113-218 58-173 (221)
163 2ift_A Putative methylase HI07 99.5 9.5E-15 3.2E-19 124.0 6.8 103 113-217 53-165 (201)
164 2bm8_A Cephalosporin hydroxyla 99.5 2.6E-14 8.8E-19 124.4 9.2 122 113-251 81-213 (236)
165 2b25_A Hypothetical protein; s 99.5 3.3E-14 1.1E-18 130.3 10.2 142 112-258 104-282 (336)
166 1dl5_A Protein-L-isoaspartate 99.5 7.7E-14 2.6E-18 126.8 12.4 111 100-217 63-177 (317)
167 2vdv_E TRNA (guanine-N(7)-)-me 99.5 5.8E-14 2E-18 122.9 11.2 99 112-215 48-173 (246)
168 2esr_A Methyltransferase; stru 99.5 8.4E-15 2.9E-19 121.5 5.5 105 112-218 30-141 (177)
169 4dcm_A Ribosomal RNA large sub 99.5 5.5E-14 1.9E-18 130.5 11.3 112 105-218 215-337 (375)
170 2fhp_A Methylase, putative; al 99.5 1.5E-14 5.1E-19 120.8 6.8 120 97-218 28-157 (187)
171 3gnl_A Uncharacterized protein 99.5 9.6E-14 3.3E-18 120.1 12.0 126 112-257 20-149 (244)
172 2yxe_A Protein-L-isoaspartate 99.5 1.1E-13 3.7E-18 118.5 12.2 111 100-217 65-179 (215)
173 1u2z_A Histone-lysine N-methyl 99.5 9E-14 3.1E-18 130.4 12.6 120 98-219 228-363 (433)
174 1g6q_1 HnRNP arginine N-methyl 99.5 3.6E-14 1.2E-18 129.6 9.4 98 113-212 38-142 (328)
175 1o9g_A RRNA methyltransferase; 99.5 4.5E-14 1.5E-18 123.9 9.6 104 113-216 51-215 (250)
176 1nv8_A HEMK protein; class I a 99.5 4.6E-14 1.6E-18 126.2 9.8 134 78-215 89-249 (284)
177 1ixk_A Methyltransferase; open 99.5 9.4E-14 3.2E-18 126.1 11.8 130 112-254 117-272 (315)
178 2fpo_A Methylase YHHF; structu 99.5 4E-14 1.4E-18 120.2 8.5 102 113-216 54-161 (202)
179 3ntv_A MW1564 protein; rossman 99.5 1.1E-13 3.6E-18 120.2 10.6 103 113-218 71-179 (232)
180 2y1w_A Histone-arginine methyl 99.5 1.1E-13 3.8E-18 127.4 11.2 111 100-214 38-154 (348)
181 3tfw_A Putative O-methyltransf 99.5 1.4E-13 4.8E-18 120.7 11.2 103 113-218 63-173 (248)
182 3gdh_A Trimethylguanosine synt 99.5 2.4E-15 8.2E-20 131.2 -0.9 139 113-258 78-220 (241)
183 3adn_A Spermidine synthase; am 99.5 1.9E-13 6.5E-18 122.6 11.2 103 113-215 83-198 (294)
184 1ne2_A Hypothetical protein TA 99.5 5E-13 1.7E-17 113.0 13.1 117 113-256 51-169 (200)
185 3dr5_A Putative O-methyltransf 99.5 1.2E-13 4.2E-18 118.9 9.4 101 114-217 57-165 (221)
186 2yvl_A TRMI protein, hypotheti 99.5 2.7E-13 9.2E-18 118.4 11.5 130 103-257 82-215 (248)
187 2gpy_A O-methyltransferase; st 99.5 2.2E-13 7.4E-18 118.2 10.6 102 113-217 54-162 (233)
188 3tm4_A TRNA (guanine N2-)-meth 99.5 7.1E-13 2.4E-17 123.1 14.6 140 95-257 201-352 (373)
189 3gjy_A Spermidine synthase; AP 99.5 2.2E-13 7.6E-18 122.5 10.7 103 114-216 90-201 (317)
190 2pjd_A Ribosomal RNA small sub 99.5 1E-13 3.5E-18 127.4 8.7 104 113-218 196-306 (343)
191 1i1n_A Protein-L-isoaspartate 99.5 3.1E-13 1.1E-17 116.5 11.1 100 112-217 76-184 (226)
192 3c3p_A Methyltransferase; NP_9 99.5 2.1E-13 7.3E-18 116.3 9.8 102 113-218 56-163 (210)
193 1jg1_A PIMT;, protein-L-isoasp 99.5 2.8E-13 9.5E-18 117.7 10.6 109 100-217 79-191 (235)
194 1ws6_A Methyltransferase; stru 99.5 4.4E-14 1.5E-18 116.1 5.2 103 113-219 41-151 (171)
195 2pbf_A Protein-L-isoaspartate 99.4 2.4E-13 8.2E-18 117.3 9.9 99 112-216 79-194 (227)
196 3duw_A OMT, O-methyltransferas 99.4 2.1E-13 7.4E-18 117.3 9.2 103 113-218 58-170 (223)
197 2qm3_A Predicted methyltransfe 99.4 1.5E-12 5.1E-17 120.9 15.3 128 113-256 172-308 (373)
198 2nyu_A Putative ribosomal RNA 99.4 5.4E-13 1.8E-17 112.2 11.2 99 111-217 20-147 (196)
199 1r18_A Protein-L-isoaspartate( 99.4 2.3E-13 7.8E-18 117.6 9.1 98 112-216 83-195 (227)
200 4hc4_A Protein arginine N-meth 99.4 2.5E-13 8.5E-18 125.3 9.6 121 88-212 59-186 (376)
201 3a27_A TYW2, uncharacterized p 99.4 3.8E-13 1.3E-17 119.5 10.3 102 112-218 118-222 (272)
202 4azs_A Methyltransferase WBDD; 99.4 8.2E-14 2.8E-18 136.4 6.5 103 113-217 66-175 (569)
203 3dou_A Ribosomal RNA large sub 99.4 8.5E-13 2.9E-17 111.0 11.0 100 108-217 20-141 (191)
204 3b3j_A Histone-arginine methyl 99.4 2.7E-13 9.2E-18 129.6 8.9 112 98-213 144-261 (480)
205 3tr6_A O-methyltransferase; ce 99.4 2.6E-13 9E-18 116.8 7.9 104 113-219 64-178 (225)
206 1xj5_A Spermidine synthase 1; 99.4 4.8E-13 1.7E-17 122.0 9.6 104 112-215 119-235 (334)
207 1iy9_A Spermidine synthase; ro 99.4 5.5E-13 1.9E-17 118.6 9.6 133 113-258 75-219 (275)
208 3r3h_A O-methyltransferase, SA 99.4 8.8E-14 3E-18 121.5 4.4 103 113-218 60-173 (242)
209 1uir_A Polyamine aminopropyltr 99.4 3.1E-13 1.1E-17 122.5 8.1 133 113-257 77-225 (314)
210 3ajd_A Putative methyltransfer 99.4 8.2E-13 2.8E-17 117.5 10.7 129 112-253 82-237 (274)
211 2pt6_A Spermidine synthase; tr 99.4 1.6E-12 5.5E-17 118.1 12.7 104 113-216 116-231 (321)
212 2yxl_A PH0851 protein, 450AA l 99.4 3.2E-12 1.1E-16 121.5 15.0 129 112-253 258-415 (450)
213 1sui_A Caffeoyl-COA O-methyltr 99.4 3.7E-13 1.3E-17 117.9 7.8 102 113-217 79-192 (247)
214 1wy7_A Hypothetical protein PH 99.4 1.1E-11 3.7E-16 105.3 16.5 124 112-257 48-175 (207)
215 2wa2_A Non-structural protein 99.4 4.2E-13 1.4E-17 119.2 7.7 100 111-217 80-195 (276)
216 2b2c_A Spermidine synthase; be 99.4 3.9E-13 1.3E-17 121.6 7.6 103 113-215 108-222 (314)
217 2igt_A SAM dependent methyltra 99.4 7.2E-13 2.5E-17 120.9 9.3 103 113-217 153-274 (332)
218 2i7c_A Spermidine synthase; tr 99.4 4.9E-13 1.7E-17 119.5 8.0 104 113-216 78-193 (283)
219 2oxt_A Nucleoside-2'-O-methylt 99.4 3.9E-13 1.3E-17 118.7 7.0 101 110-217 71-187 (265)
220 2o07_A Spermidine synthase; st 99.4 5.4E-13 1.8E-17 120.3 7.7 103 113-215 95-209 (304)
221 1inl_A Spermidine synthase; be 99.4 7.7E-13 2.6E-17 118.9 8.2 132 113-257 90-234 (296)
222 2xyq_A Putative 2'-O-methyl tr 99.4 1E-12 3.6E-17 117.0 8.7 115 112-255 62-195 (290)
223 1mjf_A Spermidine synthase; sp 99.4 7.4E-13 2.5E-17 118.2 7.7 101 113-215 75-193 (281)
224 2cmg_A Spermidine synthase; tr 99.4 1.1E-12 3.6E-17 115.8 7.9 93 113-215 72-171 (262)
225 3cbg_A O-methyltransferase; cy 99.3 2E-12 6.8E-17 112.1 9.0 103 113-218 72-185 (232)
226 3k6r_A Putative transferase PH 99.3 5.4E-12 1.8E-16 111.7 11.5 126 112-253 124-253 (278)
227 2hnk_A SAM-dependent O-methylt 99.3 1.6E-12 5.5E-17 113.1 7.7 102 113-217 60-183 (239)
228 2avd_A Catechol-O-methyltransf 99.3 2.1E-12 7.3E-17 111.4 8.3 102 113-217 69-181 (229)
229 3c3y_A Pfomt, O-methyltransfer 99.3 1.7E-12 5.7E-17 113.0 7.0 102 113-217 70-183 (237)
230 3lcv_B Sisomicin-gentamicin re 99.3 9.8E-12 3.3E-16 107.3 10.9 134 113-254 132-269 (281)
231 2p41_A Type II methyltransfera 99.3 1.8E-12 6.3E-17 116.8 6.6 104 109-217 78-193 (305)
232 1zq9_A Probable dimethyladenos 99.3 1.5E-12 5.2E-17 116.4 5.7 86 99-189 15-104 (285)
233 1sqg_A SUN protein, FMU protei 99.3 2.5E-11 8.6E-16 114.7 13.2 128 112-252 245-399 (429)
234 2frx_A Hypothetical protein YE 99.3 2.6E-11 8.9E-16 115.7 12.9 105 113-217 117-248 (479)
235 3frh_A 16S rRNA methylase; met 99.3 4.4E-11 1.5E-15 102.3 12.7 139 112-261 104-245 (253)
236 3m6w_A RRNA methylase; rRNA me 99.3 7.4E-12 2.5E-16 118.5 8.7 129 112-254 100-256 (464)
237 2b78_A Hypothetical protein SM 99.3 1.5E-11 5.1E-16 114.6 9.9 132 113-256 212-361 (385)
238 3m4x_A NOL1/NOP2/SUN family pr 99.2 8.5E-12 2.9E-16 117.9 7.6 131 112-255 104-261 (456)
239 4dmg_A Putative uncharacterize 99.2 1.2E-11 4.2E-16 115.1 7.3 132 113-257 214-357 (393)
240 3c0k_A UPF0064 protein YCCW; P 99.2 4.6E-11 1.6E-15 111.8 11.1 131 113-255 220-368 (396)
241 1wxx_A TT1595, hypothetical pr 99.2 2.3E-11 8E-16 113.2 9.0 131 113-256 209-355 (382)
242 2yx1_A Hypothetical protein MJ 99.2 4.4E-11 1.5E-15 109.4 10.7 119 112-257 194-317 (336)
243 1uwv_A 23S rRNA (uracil-5-)-me 99.2 1.9E-10 6.6E-15 108.7 15.3 137 98-258 272-415 (433)
244 1qam_A ERMC' methyltransferase 99.2 1.2E-11 4.1E-16 108.0 5.5 107 98-211 16-124 (244)
245 2as0_A Hypothetical protein PH 99.2 3.6E-11 1.2E-15 112.5 8.6 106 112-218 216-338 (396)
246 2f8l_A Hypothetical protein LM 99.2 5.8E-11 2E-15 109.0 8.8 136 113-262 130-290 (344)
247 3b5i_A S-adenosyl-L-methionine 99.1 1.1E-09 3.9E-14 100.6 16.4 149 113-261 52-302 (374)
248 3v97_A Ribosomal RNA large sub 99.1 6.1E-11 2.1E-15 118.3 8.2 104 113-217 539-659 (703)
249 2efj_A 3,7-dimethylxanthine me 99.1 6.2E-10 2.1E-14 102.5 12.8 148 114-261 53-296 (384)
250 2ih2_A Modification methylase 99.1 1.9E-10 6.6E-15 108.3 8.8 129 101-249 28-186 (421)
251 1yub_A Ermam, rRNA methyltrans 99.1 8.8E-13 3E-17 115.3 -6.9 101 112-215 28-145 (245)
252 3gru_A Dimethyladenosine trans 99.1 3E-10 1E-14 101.5 9.5 88 99-189 37-125 (295)
253 2jjq_A Uncharacterized RNA met 99.1 2E-09 6.8E-14 101.3 15.2 96 112-215 289-387 (425)
254 2h1r_A Dimethyladenosine trans 99.1 3.9E-10 1.3E-14 101.4 9.7 85 100-189 30-117 (299)
255 2qfm_A Spermine synthase; sper 99.1 5.2E-10 1.8E-14 101.8 10.2 105 112-217 187-316 (364)
256 3k0b_A Predicted N6-adenine-sp 99.0 1.1E-09 3.9E-14 101.9 11.8 123 93-217 182-352 (393)
257 3ldg_A Putative uncharacterize 99.0 2.1E-09 7.4E-14 99.6 12.4 122 94-217 176-345 (384)
258 3ldu_A Putative methylase; str 99.0 1.8E-09 6E-14 100.4 11.4 121 95-217 178-346 (385)
259 3fut_A Dimethyladenosine trans 99.0 8.3E-10 2.8E-14 97.4 8.7 88 98-189 33-121 (271)
260 2okc_A Type I restriction enzy 99.0 1.2E-09 4E-14 103.7 9.3 104 112-216 170-308 (445)
261 3bt7_A TRNA (uracil-5-)-methyl 98.9 3.6E-09 1.2E-13 97.9 11.2 134 98-258 200-352 (369)
262 2b9e_A NOL1/NOP2/SUN domain fa 98.9 8.3E-09 2.8E-13 92.9 12.9 105 112-217 101-236 (309)
263 3tqs_A Ribosomal RNA small sub 98.9 2.4E-09 8.3E-14 93.7 9.1 84 99-186 16-104 (255)
264 3o4f_A Spermidine synthase; am 98.9 9.2E-09 3.1E-13 91.1 12.1 104 112-215 82-198 (294)
265 2dul_A N(2),N(2)-dimethylguano 98.9 1.6E-09 5.4E-14 100.3 6.7 99 113-215 47-164 (378)
266 1m6e_X S-adenosyl-L-methionnin 98.9 2.9E-09 1E-13 97.2 8.3 148 112-259 50-282 (359)
267 1m6y_A S-adenosyl-methyltransf 98.9 1.3E-09 4.6E-14 97.6 5.3 84 103-187 17-107 (301)
268 3ftd_A Dimethyladenosine trans 98.9 1.6E-08 5.6E-13 88.2 11.7 75 99-176 18-92 (249)
269 3axs_A Probable N(2),N(2)-dime 98.8 4.7E-09 1.6E-13 97.3 8.0 99 113-215 52-158 (392)
270 3evf_A RNA-directed RNA polyme 98.8 1.1E-08 3.7E-13 88.9 8.3 107 110-217 71-186 (277)
271 3uzu_A Ribosomal RNA small sub 98.8 1.1E-08 3.7E-13 90.8 6.8 74 100-175 30-105 (279)
272 2qy6_A UPF0209 protein YFCK; s 98.7 6.8E-09 2.3E-13 90.9 4.9 126 113-258 60-236 (257)
273 3v97_A Ribosomal RNA large sub 98.7 6.8E-08 2.3E-12 96.4 11.9 125 91-216 169-348 (703)
274 2r6z_A UPF0341 protein in RSP 98.7 4E-09 1.4E-13 92.6 1.6 77 113-191 83-174 (258)
275 2ar0_A M.ecoki, type I restric 98.7 2.4E-08 8.2E-13 96.8 6.7 105 112-216 168-313 (541)
276 1qyr_A KSGA, high level kasuga 98.6 3.9E-08 1.3E-12 85.9 5.8 84 100-188 9-100 (252)
277 3ll7_A Putative methyltransfer 98.6 1.8E-08 6.2E-13 93.6 3.8 71 113-185 93-170 (410)
278 3cvo_A Methyltransferase-like 98.6 7.5E-07 2.6E-11 74.6 13.0 95 113-215 30-154 (202)
279 3gcz_A Polyprotein; flavivirus 98.6 5.2E-08 1.8E-12 84.8 5.6 107 110-217 87-203 (282)
280 2oyr_A UPF0341 protein YHIQ; a 98.6 3.4E-08 1.2E-12 86.4 4.0 92 115-209 90-194 (258)
281 3ua3_A Protein arginine N-meth 98.5 1.8E-07 6.1E-12 91.3 8.2 100 113-212 409-531 (745)
282 3c6k_A Spermine synthase; sper 98.5 7.3E-07 2.5E-11 81.4 10.6 103 112-215 204-331 (381)
283 4auk_A Ribosomal RNA large sub 98.4 1.5E-06 5E-11 79.1 11.7 123 111-251 209-334 (375)
284 3lkd_A Type I restriction-modi 98.4 1.1E-06 3.6E-11 85.0 11.1 140 112-263 220-394 (542)
285 4gqb_A Protein arginine N-meth 98.4 1.7E-06 6E-11 84.4 12.5 98 113-212 357-464 (637)
286 3khk_A Type I restriction-modi 98.4 6.3E-07 2.2E-11 86.7 9.3 138 115-263 246-432 (544)
287 3eld_A Methyltransferase; flav 98.4 6.2E-07 2.1E-11 78.5 7.7 108 109-217 77-193 (300)
288 3s1s_A Restriction endonucleas 98.4 1.3E-06 4.5E-11 86.6 10.7 106 112-217 320-467 (878)
289 1wg8_A Predicted S-adenosylmet 98.4 7.7E-07 2.6E-11 77.9 7.7 82 102-187 12-98 (285)
290 2k4m_A TR8_protein, UPF0146 pr 98.3 1.1E-06 3.9E-11 68.7 5.7 87 113-217 35-123 (153)
291 3p8z_A Mtase, non-structural p 98.2 7.2E-06 2.5E-10 69.2 9.2 104 110-217 75-188 (267)
292 4fzv_A Putative methyltransfer 98.2 6.1E-06 2.1E-10 75.4 9.5 107 112-218 147-287 (359)
293 2px2_A Genome polyprotein [con 98.1 8.8E-06 3E-10 69.7 9.3 103 110-217 70-185 (269)
294 3lkz_A Non-structural protein 98.1 3.1E-05 1E-09 67.6 11.8 105 111-218 92-207 (321)
295 2wk1_A NOVP; transferase, O-me 98.0 1.6E-05 5.4E-10 70.2 8.9 122 113-250 106-265 (282)
296 2vz8_A Fatty acid synthase; tr 98.0 4.6E-07 1.6E-11 101.6 -1.9 142 113-255 1240-1393(2512)
297 3tka_A Ribosomal RNA small sub 97.8 2E-05 6.7E-10 70.6 5.5 86 101-188 46-138 (347)
298 3ufb_A Type I restriction-modi 97.7 0.00012 4.2E-09 70.5 10.5 116 100-216 205-363 (530)
299 1rjd_A PPM1P, carboxy methyl t 97.7 0.00018 6.3E-09 65.1 10.1 142 113-258 97-287 (334)
300 2zig_A TTHA0409, putative modi 97.5 0.00014 4.8E-09 64.9 6.8 58 96-157 220-277 (297)
301 1i4w_A Mitochondrial replicati 97.4 0.00034 1.2E-08 63.6 8.2 74 99-172 39-117 (353)
302 3vyw_A MNMC2; tRNA wobble urid 97.2 0.0016 5.6E-08 57.7 9.9 125 113-258 96-249 (308)
303 3r24_A NSP16, 2'-O-methyl tran 97.2 0.0024 8.3E-08 55.7 10.5 116 111-256 107-240 (344)
304 2oo3_A Protein involved in cat 97.0 0.0013 4.3E-08 57.6 6.9 124 114-253 92-222 (283)
305 2uyo_A Hypothetical protein ML 97.0 0.0046 1.6E-07 55.2 10.6 141 114-257 103-278 (310)
306 1g60_A Adenine-specific methyl 96.9 0.0014 4.8E-08 57.1 6.0 57 98-158 199-255 (260)
307 3g7u_A Cytosine-specific methy 96.8 0.034 1.2E-06 51.0 15.4 129 115-258 3-152 (376)
308 3iei_A Leucine carboxyl methyl 96.7 0.052 1.8E-06 48.8 15.4 147 113-261 90-285 (334)
309 3qv2_A 5-cytosine DNA methyltr 96.7 0.036 1.2E-06 49.8 14.3 132 113-261 9-163 (327)
310 1f8f_A Benzyl alcohol dehydrog 96.6 0.0014 4.8E-08 60.1 4.4 96 112-216 189-290 (371)
311 1g55_A DNA cytosine methyltran 96.5 0.019 6.6E-07 52.0 11.2 131 114-262 2-153 (343)
312 2dph_A Formaldehyde dismutase; 96.4 0.011 3.7E-07 54.8 9.1 100 112-216 184-300 (398)
313 1kol_A Formaldehyde dehydrogen 96.3 0.024 8.3E-07 52.3 11.0 101 112-216 184-301 (398)
314 3m6i_A L-arabinitol 4-dehydrog 96.3 0.023 8E-07 51.7 10.3 97 112-216 178-284 (363)
315 4ej6_A Putative zinc-binding d 96.2 0.0053 1.8E-07 56.3 5.9 99 112-216 181-285 (370)
316 3s2e_A Zinc-containing alcohol 96.2 0.0031 1.1E-07 57.0 3.8 96 112-217 165-265 (340)
317 1pl8_A Human sorbitol dehydrog 96.1 0.0053 1.8E-07 55.9 5.1 95 112-216 170-274 (356)
318 3two_A Mannitol dehydrogenase; 96.0 0.02 6.9E-07 51.8 8.2 92 112-217 175-267 (348)
319 1e3j_A NADP(H)-dependent ketos 95.9 0.013 4.4E-07 53.2 6.8 95 112-216 167-272 (352)
320 1pqw_A Polyketide synthase; ro 95.9 0.0053 1.8E-07 50.7 3.8 92 112-216 37-138 (198)
321 2c7p_A Modification methylase 95.9 0.26 9E-06 44.1 15.1 126 113-253 10-149 (327)
322 3pvc_A TRNA 5-methylaminomethy 95.9 0.026 8.9E-07 56.1 9.3 124 113-257 58-233 (689)
323 3fpc_A NADP-dependent alcohol 95.8 0.0052 1.8E-07 55.9 3.4 96 112-216 165-267 (352)
324 3jv7_A ADH-A; dehydrogenase, n 95.7 0.0058 2E-07 55.3 3.6 97 111-217 169-272 (345)
325 3ps9_A TRNA 5-methylaminomethy 95.7 0.026 8.8E-07 56.0 8.4 124 113-257 66-241 (676)
326 4h0n_A DNMT2; SAH binding, tra 95.7 0.16 5.5E-06 45.6 12.9 130 115-260 4-151 (333)
327 4eez_A Alcohol dehydrogenase 1 95.7 0.04 1.4E-06 49.7 8.9 99 112-216 162-264 (348)
328 1uuf_A YAHK, zinc-type alcohol 95.6 0.014 4.7E-07 53.5 5.6 94 112-216 193-289 (369)
329 3fwz_A Inner membrane protein 95.6 0.28 9.4E-06 37.8 12.4 91 114-214 7-104 (140)
330 2h6e_A ADH-4, D-arabinose 1-de 95.6 0.0053 1.8E-07 55.6 2.6 97 113-216 170-270 (344)
331 1p0f_A NADP-dependent alcohol 95.5 0.013 4.3E-07 53.7 5.0 96 112-216 190-294 (373)
332 3uko_A Alcohol dehydrogenase c 95.4 0.01 3.4E-07 54.5 4.0 96 112-216 192-296 (378)
333 4dvj_A Putative zinc-dependent 95.3 0.068 2.3E-06 48.6 9.3 94 113-215 171-270 (363)
334 1cdo_A Alcohol dehydrogenase; 95.3 0.019 6.6E-07 52.5 5.6 95 112-216 191-295 (374)
335 3uog_A Alcohol dehydrogenase; 95.2 0.049 1.7E-06 49.5 8.0 95 112-217 188-289 (363)
336 3ip1_A Alcohol dehydrogenase, 95.2 0.033 1.1E-06 51.5 6.9 99 111-217 211-320 (404)
337 2jhf_A Alcohol dehydrogenase E 95.2 0.025 8.6E-07 51.7 6.0 95 112-216 190-294 (374)
338 1v3u_A Leukotriene B4 12- hydr 95.2 0.017 6E-07 51.8 4.8 92 112-216 144-245 (333)
339 2py6_A Methyltransferase FKBM; 95.2 0.024 8.3E-07 52.6 5.8 58 112-169 225-291 (409)
340 2fzw_A Alcohol dehydrogenase c 95.2 0.024 8.2E-07 51.8 5.6 95 112-216 189-293 (373)
341 1e3i_A Alcohol dehydrogenase, 95.1 0.023 7.9E-07 52.0 5.5 95 112-216 194-298 (376)
342 2j3h_A NADP-dependent oxidored 95.0 0.099 3.4E-06 47.0 9.4 92 112-215 154-255 (345)
343 3goh_A Alcohol dehydrogenase, 94.9 0.038 1.3E-06 49.2 6.1 88 112-215 141-229 (315)
344 4b7c_A Probable oxidoreductase 94.9 0.088 3E-06 47.2 8.5 95 112-216 148-249 (336)
345 3tos_A CALS11; methyltransfera 94.8 0.078 2.7E-06 45.7 7.6 104 113-218 69-220 (257)
346 1rjw_A ADH-HT, alcohol dehydro 94.8 0.16 5.6E-06 45.5 10.0 94 112-217 163-263 (339)
347 3nx4_A Putative oxidoreductase 94.7 0.049 1.7E-06 48.6 6.3 91 116-216 149-242 (324)
348 2b5w_A Glucose dehydrogenase; 94.7 0.11 3.8E-06 47.0 8.8 89 115-216 174-274 (357)
349 4a2c_A Galactitol-1-phosphate 94.7 0.043 1.5E-06 49.5 5.9 98 112-218 159-263 (346)
350 3gms_A Putative NADPH:quinone 94.5 0.018 6.1E-07 52.0 2.9 94 112-216 143-244 (340)
351 1jvb_A NAD(H)-dependent alcoho 94.4 0.14 4.8E-06 46.1 8.8 96 112-216 169-272 (347)
352 3qwb_A Probable quinone oxidor 94.4 0.14 4.7E-06 45.9 8.6 95 111-216 146-248 (334)
353 4eye_A Probable oxidoreductase 94.3 0.12 4.2E-06 46.5 8.1 92 112-215 158-257 (342)
354 1piw_A Hypothetical zinc-type 94.3 0.02 7E-07 52.1 2.8 96 112-216 178-277 (360)
355 2c0c_A Zinc binding alcohol de 94.3 0.035 1.2E-06 50.6 4.4 94 112-216 162-262 (362)
356 2zwa_A Leucine carboxyl methyl 94.2 0.27 9.3E-06 48.8 11.1 145 113-260 107-312 (695)
357 2d8a_A PH0655, probable L-thre 94.2 0.039 1.3E-06 49.9 4.6 94 113-216 167-268 (348)
358 3jyn_A Quinone oxidoreductase; 94.2 0.029 9.9E-07 50.2 3.6 95 111-216 138-240 (325)
359 2hcy_A Alcohol dehydrogenase 1 94.1 0.025 8.7E-07 51.1 3.0 94 112-217 168-271 (347)
360 1boo_A Protein (N-4 cytosine-s 94.1 0.096 3.3E-06 46.9 6.7 57 98-158 239-295 (323)
361 1yb5_A Quinone oxidoreductase; 94.0 0.29 1E-05 44.1 10.0 92 112-216 169-270 (351)
362 1vj0_A Alcohol dehydrogenase, 94.0 0.039 1.3E-06 50.6 4.0 96 112-217 194-300 (380)
363 3ubt_Y Modification methylase 93.9 2.5 8.4E-05 37.5 15.8 132 115-262 1-147 (331)
364 2eih_A Alcohol dehydrogenase; 93.9 0.072 2.5E-06 48.0 5.6 92 112-216 165-266 (343)
365 2zb4_A Prostaglandin reductase 93.7 0.35 1.2E-05 43.6 9.9 92 112-215 157-260 (357)
366 3llv_A Exopolyphosphatase-rela 93.7 0.61 2.1E-05 35.6 10.0 89 114-214 6-102 (141)
367 2zig_A TTHA0409, putative modi 93.7 0.14 4.8E-06 45.2 7.0 93 160-255 20-134 (297)
368 1iz0_A Quinone oxidoreductase; 93.5 0.025 8.7E-07 50.0 1.9 93 111-215 123-218 (302)
369 4dup_A Quinone oxidoreductase; 93.5 0.055 1.9E-06 49.0 4.1 94 112-216 166-266 (353)
370 1qor_A Quinone oxidoreductase; 93.5 0.25 8.4E-06 44.0 8.4 92 112-216 139-240 (327)
371 1xa0_A Putative NADPH dependen 93.3 0.1 3.5E-06 46.6 5.5 95 112-216 147-247 (328)
372 2j8z_A Quinone oxidoreductase; 93.2 0.47 1.6E-05 42.8 10.0 94 112-216 161-262 (354)
373 2cf5_A Atccad5, CAD, cinnamyl 93.2 0.095 3.2E-06 47.5 5.3 96 113-216 180-276 (357)
374 3fbg_A Putative arginate lyase 93.2 0.26 8.9E-06 44.3 8.2 92 113-215 150-248 (346)
375 1eg2_A Modification methylase 93.2 0.17 5.7E-06 45.3 6.7 59 96-158 227-288 (319)
376 1yqd_A Sinapyl alcohol dehydro 93.1 0.15 5.3E-06 46.3 6.5 95 113-216 187-283 (366)
377 1zkd_A DUF185; NESG, RPR58, st 93.1 0.42 1.4E-05 43.7 9.3 76 113-192 80-163 (387)
378 1wly_A CAAR, 2-haloacrylate re 93.0 0.41 1.4E-05 42.7 9.1 92 112-216 144-245 (333)
379 2dq4_A L-threonine 3-dehydroge 93.0 0.14 4.9E-06 46.0 6.0 91 113-216 164-263 (343)
380 3gqv_A Enoyl reductase; medium 92.9 0.097 3.3E-06 47.8 4.9 93 112-215 163-263 (371)
381 2cdc_A Glucose dehydrogenase g 92.7 0.34 1.2E-05 43.9 8.2 89 114-217 181-280 (366)
382 1lss_A TRK system potassium up 92.6 2.2 7.5E-05 32.0 11.7 92 114-214 4-101 (140)
383 1tt7_A YHFP; alcohol dehydroge 92.5 0.097 3.3E-06 46.8 4.3 97 112-216 148-248 (330)
384 4a0s_A Octenoyl-COA reductase/ 92.5 0.42 1.4E-05 44.6 8.7 98 111-216 218-337 (447)
385 3tqh_A Quinone oxidoreductase; 92.5 0.15 5.3E-06 45.3 5.5 93 112-216 151-246 (321)
386 2vn8_A Reticulon-4-interacting 92.5 0.086 2.9E-06 48.1 3.9 96 111-216 181-281 (375)
387 4eso_A Putative oxidoreductase 92.4 0.39 1.3E-05 41.1 7.8 101 113-216 7-139 (255)
388 3krt_A Crotonyl COA reductase; 92.2 0.83 2.8E-05 42.7 10.5 95 111-216 226-345 (456)
389 3gaz_A Alcohol dehydrogenase s 92.1 0.11 3.9E-06 46.7 4.2 91 112-216 149-247 (343)
390 3c85_A Putative glutathione-re 92.1 1.2 4.1E-05 35.7 10.0 92 113-214 38-138 (183)
391 3me5_A Cytosine-specific methy 92.1 2.3 7.8E-05 40.1 13.1 74 114-189 88-180 (482)
392 2qrv_A DNA (cytosine-5)-methyl 92.1 0.57 2E-05 41.2 8.5 71 112-186 14-91 (295)
393 2vhw_A Alanine dehydrogenase; 92.1 0.1 3.4E-06 47.9 3.8 101 113-215 167-268 (377)
394 3e8x_A Putative NAD-dependent 92.0 3.6 0.00012 34.2 13.4 138 113-256 20-170 (236)
395 3l9w_A Glutathione-regulated p 91.7 0.95 3.3E-05 41.8 10.0 91 114-214 4-101 (413)
396 3ius_A Uncharacterized conserv 91.5 3.2 0.00011 35.5 12.9 72 115-194 6-79 (286)
397 2eez_A Alanine dehydrogenase; 91.5 0.12 4E-06 47.2 3.6 101 113-215 165-266 (369)
398 1boo_A Protein (N-4 cytosine-s 91.5 0.53 1.8E-05 42.0 7.8 88 160-255 13-118 (323)
399 4fgs_A Probable dehydrogenase 91.3 0.67 2.3E-05 40.3 8.1 101 113-216 28-160 (273)
400 1pjc_A Protein (L-alanine dehy 90.4 0.14 4.7E-06 46.6 2.9 101 113-215 166-267 (361)
401 3p2y_A Alanine dehydrogenase/p 89.5 0.19 6.4E-06 45.9 3.0 97 113-214 183-301 (381)
402 3ce6_A Adenosylhomocysteinase; 89.0 1.3 4.3E-05 42.0 8.4 90 112-216 272-362 (494)
403 3oig_A Enoyl-[acyl-carrier-pro 88.8 4.6 0.00016 34.3 11.3 102 113-216 6-148 (266)
404 4dio_A NAD(P) transhydrogenase 88.6 0.28 9.5E-06 45.2 3.5 97 113-214 189-311 (405)
405 2a4k_A 3-oxoacyl-[acyl carrier 88.6 4.3 0.00015 34.6 11.1 102 113-217 5-138 (263)
406 3grk_A Enoyl-(acyl-carrier-pro 88.3 3 0.0001 36.3 10.0 102 113-216 30-170 (293)
407 4e6p_A Probable sorbitol dehyd 88.1 2.9 9.9E-05 35.5 9.6 74 113-189 7-93 (259)
408 1l7d_A Nicotinamide nucleotide 88.0 0.39 1.3E-05 44.0 4.1 42 113-155 171-213 (384)
409 3pxx_A Carveol dehydrogenase; 87.8 3.3 0.00011 35.6 9.9 102 113-216 9-154 (287)
410 4e21_A 6-phosphogluconate dehy 87.7 1.8 6.2E-05 39.1 8.3 121 113-258 21-143 (358)
411 3guy_A Short-chain dehydrogena 87.7 5.5 0.00019 32.9 10.9 71 116-189 3-83 (230)
412 3f9i_A 3-oxoacyl-[acyl-carrier 87.3 3.6 0.00012 34.5 9.7 75 112-189 12-95 (249)
413 2g1u_A Hypothetical protein TM 87.3 2.1 7.1E-05 33.3 7.6 97 112-215 17-118 (155)
414 1x13_A NAD(P) transhydrogenase 87.1 0.33 1.1E-05 44.7 3.1 98 113-215 171-292 (401)
415 3gvc_A Oxidoreductase, probabl 87.0 2 6.9E-05 37.1 8.0 75 113-190 28-115 (277)
416 1id1_A Putative potassium chan 87.0 5.1 0.00018 30.8 9.7 96 114-215 3-105 (153)
417 3g0o_A 3-hydroxyisobutyrate de 87.0 6.3 0.00022 34.3 11.3 87 114-214 7-101 (303)
418 3o38_A Short chain dehydrogena 87.0 4 0.00014 34.7 9.8 75 113-189 21-112 (266)
419 1sby_A Alcohol dehydrogenase; 87.0 9.6 0.00033 31.9 12.2 103 113-216 4-138 (254)
420 2gdz_A NAD+-dependent 15-hydro 86.7 2.8 9.5E-05 35.7 8.7 102 113-216 6-140 (267)
421 3swr_A DNA (cytosine-5)-methyl 85.9 15 0.0005 37.9 14.6 127 113-253 539-698 (1002)
422 4a27_A Synaptic vesicle membra 85.7 0.27 9.2E-06 44.3 1.6 93 111-216 140-239 (349)
423 3l4b_C TRKA K+ channel protien 85.7 7.3 0.00025 32.0 10.5 89 116-214 2-98 (218)
424 3ek2_A Enoyl-(acyl-carrier-pro 85.6 3 0.0001 35.5 8.3 102 112-215 12-153 (271)
425 3ijr_A Oxidoreductase, short c 85.6 6.8 0.00023 33.9 10.7 102 113-216 46-183 (291)
426 3tjr_A Short chain dehydrogena 85.5 3.7 0.00013 35.8 9.0 75 113-189 30-119 (301)
427 4egf_A L-xylulose reductase; s 85.3 4 0.00014 34.8 8.9 75 113-189 19-109 (266)
428 4g81_D Putative hexonate dehyd 85.1 4 0.00014 34.9 8.7 76 113-190 8-98 (255)
429 4fs3_A Enoyl-[acyl-carrier-pro 85.1 4 0.00014 34.7 8.8 102 113-216 5-147 (256)
430 3l6e_A Oxidoreductase, short-c 84.8 3.6 0.00012 34.4 8.3 73 114-189 3-88 (235)
431 3is3_A 17BETA-hydroxysteroid d 84.8 4.9 0.00017 34.3 9.3 103 113-217 17-154 (270)
432 3ggo_A Prephenate dehydrogenas 84.8 7.4 0.00025 34.3 10.6 91 114-214 33-127 (314)
433 3d4o_A Dipicolinate synthase s 84.4 6.4 0.00022 34.2 9.9 89 113-215 154-244 (293)
434 3h7a_A Short chain dehydrogena 84.4 3.8 0.00013 34.7 8.3 75 113-189 6-94 (252)
435 3lf2_A Short chain oxidoreduct 84.1 7.3 0.00025 33.1 10.1 75 113-189 7-98 (265)
436 1wma_A Carbonyl reductase [NAD 84.0 2 7E-05 36.4 6.5 103 113-216 3-139 (276)
437 4dqx_A Probable oxidoreductase 84.0 5.2 0.00018 34.4 9.1 74 113-189 26-112 (277)
438 3k31_A Enoyl-(acyl-carrier-pro 84.0 3.9 0.00013 35.5 8.4 102 113-216 29-169 (296)
439 4f3n_A Uncharacterized ACR, CO 83.7 0.76 2.6E-05 42.6 3.7 43 114-156 138-185 (432)
440 3o26_A Salutaridine reductase; 83.5 13 0.00043 32.0 11.6 75 113-189 11-102 (311)
441 4imr_A 3-oxoacyl-(acyl-carrier 83.2 4.8 0.00016 34.6 8.6 75 113-189 32-120 (275)
442 3pi7_A NADH oxidoreductase; gr 83.1 3.1 0.00011 37.1 7.5 92 114-216 165-264 (349)
443 3pgx_A Carveol dehydrogenase; 83.0 7.7 0.00026 33.2 9.8 76 113-190 14-117 (280)
444 3ioy_A Short-chain dehydrogena 83.0 4.3 0.00015 35.7 8.3 75 113-189 7-98 (319)
445 3rwb_A TPLDH, pyridoxal 4-dehy 82.5 3.4 0.00012 34.8 7.2 74 113-189 5-91 (247)
446 3gvp_A Adenosylhomocysteinase 82.4 7.2 0.00024 36.1 9.6 89 112-215 218-307 (435)
447 2aef_A Calcium-gated potassium 82.4 11 0.00036 31.3 10.2 90 113-215 8-105 (234)
448 3v2g_A 3-oxoacyl-[acyl-carrier 82.4 7 0.00024 33.4 9.3 102 113-216 30-166 (271)
449 3lyl_A 3-oxoacyl-(acyl-carrier 82.3 10 0.00035 31.5 10.2 75 113-189 4-93 (247)
450 3dii_A Short-chain dehydrogena 82.2 5.3 0.00018 33.6 8.3 72 114-189 2-86 (247)
451 3iht_A S-adenosyl-L-methionine 82.2 1.6 5.3E-05 34.3 4.3 101 113-217 40-149 (174)
452 4hp8_A 2-deoxy-D-gluconate 3-d 82.1 15 0.00051 31.1 11.0 73 113-189 8-90 (247)
453 3sx2_A Putative 3-ketoacyl-(ac 82.0 4.6 0.00016 34.5 8.0 102 113-216 12-158 (278)
454 3tsc_A Putative oxidoreductase 81.8 7.1 0.00024 33.4 9.2 76 113-190 10-113 (277)
455 2hmt_A YUAA protein; RCK, KTN, 81.7 8.9 0.0003 28.6 8.8 92 114-214 6-103 (144)
456 2rir_A Dipicolinate synthase, 81.7 5.5 0.00019 34.8 8.4 89 113-215 156-246 (300)
457 3edm_A Short chain dehydrogena 81.6 6.2 0.00021 33.4 8.6 101 113-215 7-143 (259)
458 1e7w_A Pteridine reductase; di 81.6 9.7 0.00033 32.9 10.0 59 113-172 8-72 (291)
459 2h7i_A Enoyl-[acyl-carrier-pro 81.5 3.7 0.00013 35.0 7.2 102 113-215 6-148 (269)
460 3r1i_A Short-chain type dehydr 81.4 4.3 0.00015 34.9 7.5 76 113-190 31-121 (276)
461 3op4_A 3-oxoacyl-[acyl-carrier 81.4 5.2 0.00018 33.7 8.0 74 113-189 8-94 (248)
462 1zsy_A Mitochondrial 2-enoyl t 81.3 2.3 8E-05 38.1 6.0 93 112-215 166-270 (357)
463 1ja9_A 4HNR, 1,3,6,8-tetrahydr 81.1 3.1 0.00011 35.4 6.5 103 113-216 20-156 (274)
464 4dkj_A Cytosine-specific methy 81.1 10 0.00034 34.8 10.2 42 114-157 10-58 (403)
465 3r3s_A Oxidoreductase; structu 81.1 5.8 0.0002 34.4 8.3 102 113-216 48-186 (294)
466 3tfo_A Putative 3-oxoacyl-(acy 81.0 6.4 0.00022 33.6 8.5 75 113-189 3-92 (264)
467 1qsg_A Enoyl-[acyl-carrier-pro 80.9 13 0.00043 31.5 10.4 102 113-216 8-149 (265)
468 1g60_A Adenine-specific methyl 80.7 2.3 7.9E-05 36.4 5.5 78 163-257 6-99 (260)
469 1gu7_A Enoyl-[acyl-carrier-pro 80.7 0.97 3.3E-05 40.8 3.2 94 112-216 165-276 (364)
470 3uve_A Carveol dehydrogenase ( 80.7 10 0.00035 32.5 9.8 75 113-189 10-115 (286)
471 3n58_A Adenosylhomocysteinase; 80.7 6.7 0.00023 36.5 8.8 89 112-215 245-334 (464)
472 1cyd_A Carbonyl reductase; sho 80.6 20 0.00068 29.5 11.4 74 113-189 6-87 (244)
473 2km1_A Protein DRE2; yeast, an 80.2 1.3 4.5E-05 33.9 3.3 41 173-213 54-96 (136)
474 3pk0_A Short-chain dehydrogena 80.2 4.5 0.00016 34.4 7.2 75 113-189 9-99 (262)
475 3t4x_A Oxidoreductase, short c 80.1 11 0.00036 32.1 9.6 75 113-189 9-96 (267)
476 3ksu_A 3-oxoacyl-acyl carrier 79.7 5.9 0.0002 33.7 7.8 103 113-216 10-148 (262)
477 3d3w_A L-xylulose reductase; u 79.5 23 0.00077 29.2 11.4 73 113-189 6-87 (244)
478 3u5t_A 3-oxoacyl-[acyl-carrier 79.4 5.5 0.00019 34.0 7.5 102 113-216 26-162 (267)
479 3uf0_A Short-chain dehydrogena 79.3 11 0.00037 32.2 9.4 76 113-190 30-118 (273)
480 3nrc_A Enoyl-[acyl-carrier-pro 79.2 18 0.00061 30.9 10.8 74 113-190 25-115 (280)
481 1w6u_A 2,4-dienoyl-COA reducta 79.2 11 0.00036 32.5 9.5 75 113-189 25-115 (302)
482 4da9_A Short-chain dehydrogena 79.2 12 0.00041 32.1 9.7 74 113-188 28-117 (280)
483 3t7c_A Carveol dehydrogenase; 78.7 15 0.00052 31.7 10.3 75 113-189 27-128 (299)
484 1ae1_A Tropinone reductase-I; 78.7 9.3 0.00032 32.5 8.8 75 113-189 20-110 (273)
485 1spx_A Short-chain reductase f 78.6 3.8 0.00013 35.0 6.3 75 113-189 5-97 (278)
486 4ft4_B DNA (cytosine-5)-methyl 78.5 50 0.0017 32.9 15.2 45 113-157 211-260 (784)
487 2ae2_A Protein (tropinone redu 77.8 10 0.00035 32.0 8.7 75 113-189 8-98 (260)
488 2qhx_A Pteridine reductase 1; 77.8 23 0.00078 31.1 11.3 59 113-172 45-109 (328)
489 3r6d_A NAD-dependent epimerase 77.7 26 0.0009 28.3 11.1 133 115-255 6-153 (221)
490 2hwk_A Helicase NSP2; rossman 77.4 6.2 0.00021 34.2 6.9 59 160-219 188-258 (320)
491 3oid_A Enoyl-[acyl-carrier-pro 77.4 14 0.00048 31.1 9.5 74 113-188 3-92 (258)
492 1xhl_A Short-chain dehydrogena 77.4 5.8 0.0002 34.5 7.2 74 113-188 25-116 (297)
493 4fc7_A Peroxisomal 2,4-dienoyl 77.4 8.7 0.0003 32.8 8.2 74 113-188 26-115 (277)
494 4ibo_A Gluconate dehydrogenase 76.8 8.2 0.00028 33.0 7.9 75 113-189 25-114 (271)
495 3c24_A Putative oxidoreductase 76.7 15 0.00051 31.5 9.6 84 115-212 12-98 (286)
496 1xg5_A ARPG836; short chain de 76.6 19 0.00065 30.6 10.2 75 113-189 31-122 (279)
497 2pd4_A Enoyl-[acyl-carrier-pro 76.3 13 0.00046 31.5 9.2 102 113-216 5-145 (275)
498 3oec_A Carveol dehydrogenase ( 76.2 9.2 0.00031 33.5 8.2 75 113-189 45-146 (317)
499 3gg2_A Sugar dehydrogenase, UD 75.8 11 0.00038 35.0 9.0 95 115-215 3-122 (450)
500 1geg_A Acetoin reductase; SDR 75.7 11 0.00037 31.7 8.2 73 114-188 2-89 (256)
No 1
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.89 E-value=7.9e-22 Score=175.28 Aligned_cols=176 Identities=23% Similarity=0.254 Sum_probs=137.2
Q ss_pred hhhhhhhhcccCCCCchHHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC--
Q 019479 81 RFLSIVYDHVINPGHWTEDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-- 158 (340)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~-- 158 (340)
+...+.|+...............++..+....++.+|||||||+|.++..+++. ++.+|+|+|+|+.+++.++++..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~ 92 (267)
T 3kkz_A 14 NLICDFFSNMERQGPGSPEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQS 92 (267)
T ss_dssp HHHHHHHHTSSCSSSCCHHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhccccCCCCHHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHc
Confidence 334455554433334445555666666654467899999999999999999998 67899999999999999997732
Q ss_pred --CCCcEEEEcCCCCCCCCCCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCC----chhHhhHhhhHhh
Q 019479 159 --LKECTIIEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYP----TFWLSRFFADVWM 232 (340)
Q Consensus 159 --~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~----~~~~~~~~~~~~~ 232 (340)
.++++++++|+.++++++++||+|++..+++|+ ++..+++++.++|||||++++.++... .......+...+.
T Consensus 93 ~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (267)
T 3kkz_A 93 GLQNRVTGIVGSMDDLPFRNEELDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYP 171 (267)
T ss_dssp TCTTTEEEEECCTTSCCCCTTCEEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCT
T ss_pred CCCcCcEEEEcChhhCCCCCCCEEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCC
Confidence 256999999999988888999999999999999 899999999999999999999875421 1112222222233
Q ss_pred cCCCHHHHHHHHHHCCCcEEEEEEeC
Q 019479 233 LFPKEEEYIEWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 233 ~~~~~~~~~~~l~~aGF~~v~~~~~~ 258 (340)
.+.+.+++.++++++||+++++..+.
T Consensus 172 ~~~~~~~~~~~l~~aGf~~v~~~~~~ 197 (267)
T 3kkz_A 172 EIDTIPNQVAKIHKAGYLPVATFILP 197 (267)
T ss_dssp TCEEHHHHHHHHHHTTEEEEEEEECC
T ss_pred CCCCHHHHHHHHHHCCCEEEEEEECC
Confidence 46689999999999999999998875
No 2
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.89 E-value=5.6e-22 Score=172.60 Aligned_cols=156 Identities=23% Similarity=0.229 Sum_probs=124.4
Q ss_pred HHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC-CCcEEEEcCCCCCCCCCCCcc
Q 019479 102 DEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-KECTIIEGDAEDLPFPTDYAD 180 (340)
Q Consensus 102 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~-~~i~~~~~d~~~~~~~~~~fD 180 (340)
..++..+....++.+|||||||+|.++..+++.+|+.+|+|+|+|+.+++.++++... .+++++++|+.++++. ++||
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~-~~fD 111 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE-EKYD 111 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCC-SCEE
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCC-CCce
Confidence 3444444434578999999999999999999998889999999999999999988543 3799999999998866 8899
Q ss_pred EEEecCcccccCCHH--HHHHHHHHhcccCcEEEEEccCCCchhH-hhHhhh-----------------------HhhcC
Q 019479 181 RYVSAGSIEYWPDPQ--RGIKEAYRVLKIGGKACVIGPVYPTFWL-SRFFAD-----------------------VWMLF 234 (340)
Q Consensus 181 ~v~~~~~l~~~~d~~--~~l~~~~~~LkpgG~l~i~~~~~~~~~~-~~~~~~-----------------------~~~~~ 234 (340)
+|++..+++|++++. .+++++.++|||||++++.+...+.... ...... .....
T Consensus 112 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (234)
T 3dtn_A 112 MVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKD 191 (234)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCC
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccc
Confidence 999999999998776 5999999999999999998765543211 111111 11124
Q ss_pred CCHHHHHHHHHHCCCcEEEEEEeC
Q 019479 235 PKEEEYIEWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 235 ~~~~~~~~~l~~aGF~~v~~~~~~ 258 (340)
++.+++.++|+++||+++++....
T Consensus 192 ~~~~~~~~ll~~aGF~~v~~~~~~ 215 (234)
T 3dtn_A 192 IEMNQQLNWLKEAGFRDVSCIYKY 215 (234)
T ss_dssp CBHHHHHHHHHHTTCEEEEEEEEE
T ss_pred cCHHHHHHHHHHcCCCceeeeeee
Confidence 578999999999999999887654
No 3
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.89 E-value=8.9e-22 Score=174.35 Aligned_cols=162 Identities=18% Similarity=0.235 Sum_probs=134.0
Q ss_pred HHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC-CCcEEEEcCCCCCCCCC
Q 019479 98 EDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-KECTIIEGDAEDLPFPT 176 (340)
Q Consensus 98 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~-~~i~~~~~d~~~~~~~~ 176 (340)
......++..+.. .++.+|||||||+|.++..+++.+ +.+|+|+|+|+.+++.++++... .+++++++|+.++++++
T Consensus 41 ~~~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~ 118 (266)
T 3ujc_A 41 LEATKKILSDIEL-NENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPE 118 (266)
T ss_dssp HHHHHHHTTTCCC-CTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCT
T ss_pred HHHHHHHHHhcCC-CCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCC
Confidence 3455666666654 478899999999999999999986 78999999999999999998654 68999999999988888
Q ss_pred CCccEEEecCccccc--CCHHHHHHHHHHhcccCcEEEEEccCCCc-----hhHhhHhhhHhhcCCCHHHHHHHHHHCCC
Q 019479 177 DYADRYVSAGSIEYW--PDPQRGIKEAYRVLKIGGKACVIGPVYPT-----FWLSRFFADVWMLFPKEEEYIEWFQKAGF 249 (340)
Q Consensus 177 ~~fD~v~~~~~l~~~--~d~~~~l~~~~~~LkpgG~l~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~aGF 249 (340)
++||+|++..+++|+ .++..+++++.++|||||++++.++.... .............+.+.+++.++++++||
T Consensus 119 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 198 (266)
T 3ujc_A 119 NNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNF 198 (266)
T ss_dssp TCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTC
T ss_pred CcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCC
Confidence 999999999999999 78889999999999999999998764433 11222222333346799999999999999
Q ss_pred cEEEEEEeCCcc
Q 019479 250 KDVKLKRIGPKW 261 (340)
Q Consensus 250 ~~v~~~~~~~~~ 261 (340)
+++++..+...+
T Consensus 199 ~~~~~~~~~~~~ 210 (266)
T 3ujc_A 199 KNVVSKDLSDYW 210 (266)
T ss_dssp EEEEEEECHHHH
T ss_pred eEEEEEeCCHHH
Confidence 999998876543
No 4
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.88 E-value=4e-22 Score=176.48 Aligned_cols=142 Identities=20% Similarity=0.303 Sum_probs=112.9
Q ss_pred CCCCEEEEEcCccchHHHHHHHhC--CCceEEEEeCCHHHHHHHHHhCC----CCCcEEEEcCCCCCCCCCCCccEEEec
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHV--DAKNVTILDQSPHQLAKAKQKEP----LKECTIIEGDAEDLPFPTDYADRYVSA 185 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~~v~g~D~s~~~~~~a~~~~~----~~~i~~~~~d~~~~~~~~~~fD~v~~~ 185 (340)
+++.+|||||||+|..+..+++.+ ++.+|+|+|+|+.|++.|+++.. ..+++++++|+.++++ +.||+|+++
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~--~~~d~v~~~ 146 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI--ENASMVVLN 146 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC--CSEEEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc--cccccceee
Confidence 478999999999999999999875 46799999999999999998732 3579999999998875 459999999
Q ss_pred CcccccCCHH--HHHHHHHHhcccCcEEEEEccCCCch-hHhhHhhh------------------------HhhcCCCHH
Q 019479 186 GSIEYWPDPQ--RGIKEAYRVLKIGGKACVIGPVYPTF-WLSRFFAD------------------------VWMLFPKEE 238 (340)
Q Consensus 186 ~~l~~~~d~~--~~l~~~~~~LkpgG~l~i~~~~~~~~-~~~~~~~~------------------------~~~~~~~~~ 238 (340)
.++||+++.+ .+|++++++|||||++++.+...... ........ ......+.+
T Consensus 147 ~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~s~~ 226 (261)
T 4gek_A 147 FTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVE 226 (261)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCBCHH
T ss_pred eeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccCCCHH
Confidence 9999997654 68999999999999999987654321 11111100 011245789
Q ss_pred HHHHHHHHCCCcEEEEE
Q 019479 239 EYIEWFQKAGFKDVKLK 255 (340)
Q Consensus 239 ~~~~~l~~aGF~~v~~~ 255 (340)
++.++|+++||+.+++.
T Consensus 227 ~~~~~L~~AGF~~ve~~ 243 (261)
T 4gek_A 227 THKARLHKAGFEHSELW 243 (261)
T ss_dssp HHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHcCCCeEEEE
Confidence 99999999999988764
No 5
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.88 E-value=1.7e-22 Score=176.58 Aligned_cols=143 Identities=24% Similarity=0.325 Sum_probs=122.7
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCcccccC
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEYWP 192 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 192 (340)
++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++....+++++++|+.++++++++||+|++..+++|++
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 130 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTE 130 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSSS
T ss_pred CCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhcc
Confidence 6789999999999999999998 77999999999999999988766889999999999888889999999999999999
Q ss_pred CHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhH-----hhcCCCHHHHHHHHHHCCCcEEEEEEe
Q 019479 193 DPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADV-----WMLFPKEEEYIEWFQKAGFKDVKLKRI 257 (340)
Q Consensus 193 d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~aGF~~v~~~~~ 257 (340)
++..+++++.++|||||++++................. .....+.+++.++++++||++++...+
T Consensus 131 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 200 (242)
T 3l8d_A 131 EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGIGV 200 (242)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEeecc
Confidence 99999999999999999999987654432222222211 223578999999999999999998765
No 6
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.88 E-value=1.2e-21 Score=172.90 Aligned_cols=162 Identities=21% Similarity=0.269 Sum_probs=129.6
Q ss_pred CchHHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC----CCCcEEEEcCCC
Q 019479 95 HWTEDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECTIIEGDAE 170 (340)
Q Consensus 95 ~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~----~~~i~~~~~d~~ 170 (340)
.........++..+....++.+|||||||+|.++..+++..+ .+|+|+|+|+.+++.++++.. ..+++++++|+.
T Consensus 28 ~~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 106 (257)
T 3f4k_A 28 PGSPEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVK-GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMD 106 (257)
T ss_dssp SCCHHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCC-SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred CCCHHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChh
Confidence 334455566666665456788999999999999999999965 499999999999999987632 245999999999
Q ss_pred CCCCCCCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCC----chhHhhHhhhHhhcCCCHHHHHHHHHH
Q 019479 171 DLPFPTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYP----TFWLSRFFADVWMLFPKEEEYIEWFQK 246 (340)
Q Consensus 171 ~~~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~ 246 (340)
++++++++||+|++..+++|+ ++..+++++.++|||||++++.++... ..............+.+.+++.+++++
T Consensus 107 ~~~~~~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 185 (257)
T 3f4k_A 107 NLPFQNEELDLIWSEGAIYNI-GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMER 185 (257)
T ss_dssp SCSSCTTCEEEEEEESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHH
T ss_pred hCCCCCCCEEEEEecChHhhc-CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHH
Confidence 988888999999999999999 899999999999999999999875321 111222222333346789999999999
Q ss_pred CCCcEEEEEEeC
Q 019479 247 AGFKDVKLKRIG 258 (340)
Q Consensus 247 aGF~~v~~~~~~ 258 (340)
+||++++...+.
T Consensus 186 aGf~~v~~~~~~ 197 (257)
T 3f4k_A 186 AGYTPTAHFILP 197 (257)
T ss_dssp TTEEEEEEEECC
T ss_pred CCCeEEEEEECC
Confidence 999999987765
No 7
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.88 E-value=4.1e-22 Score=174.54 Aligned_cols=141 Identities=19% Similarity=0.130 Sum_probs=118.0
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCcccccC
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEYWP 192 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 192 (340)
++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++... +++++++|++++ .++++||+|++.++++|++
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~-~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~ 117 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEH--FNDITCVEASEEAISHAQGRLKD-GITYIHSRFEDA-QLPRRYDNIVLTHVLEHID 117 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTT--CSCEEEEESCHHHHHHHHHHSCS-CEEEEESCGGGC-CCSSCEEEEEEESCGGGCS
T ss_pred CCCcEEEECCCCCHHHHHHHHh--CCcEEEEeCCHHHHHHHHHhhhC-CeEEEEccHHHc-CcCCcccEEEEhhHHHhhc
Confidence 5678999999999999999987 45899999999999999988664 899999999887 4678899999999999999
Q ss_pred CHHHHHHHHH-HhcccCcEEEEEccCCCchhHhhH----------------hhhHhhcCCCHHHHHHHHHHCCCcEEEEE
Q 019479 193 DPQRGIKEAY-RVLKIGGKACVIGPVYPTFWLSRF----------------FADVWMLFPKEEEYIEWFQKAGFKDVKLK 255 (340)
Q Consensus 193 d~~~~l~~~~-~~LkpgG~l~i~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~l~~aGF~~v~~~ 255 (340)
|+..+++++. ++|||||++++..+.......... ....+..+++.+++.++++++||+++++.
T Consensus 118 ~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 197 (250)
T 2p7i_A 118 DPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYRS 197 (250)
T ss_dssp SHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEEEe
Confidence 9999999999 999999999999876543211110 01112235789999999999999999887
Q ss_pred Ee
Q 019479 256 RI 257 (340)
Q Consensus 256 ~~ 257 (340)
.+
T Consensus 198 ~~ 199 (250)
T 2p7i_A 198 GI 199 (250)
T ss_dssp EE
T ss_pred ee
Confidence 65
No 8
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.88 E-value=2e-21 Score=167.39 Aligned_cols=145 Identities=22% Similarity=0.226 Sum_probs=120.3
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCcccccC
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEYWP 192 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 192 (340)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++.. .+++++++|+.+++++ ++||+|++..+++|++
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~ 120 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLP-KEFSITEGDFLSFEVP-TSIDTIVSTYAFHHLT 120 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSC-TTCCEESCCSSSCCCC-SCCSEEEEESCGGGSC
T ss_pred CCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCC-CceEEEeCChhhcCCC-CCeEEEEECcchhcCC
Confidence 6789999999999999999998 7899999999999999999876 6899999999998877 8899999999999999
Q ss_pred CHHH--HHHHHHHhcccCcEEEEEccCCCchhHhhHh--------------hhHhhcCCCHHHHHHHHHHCCCcEEEEEE
Q 019479 193 DPQR--GIKEAYRVLKIGGKACVIGPVYPTFWLSRFF--------------ADVWMLFPKEEEYIEWFQKAGFKDVKLKR 256 (340)
Q Consensus 193 d~~~--~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~l~~aGF~~v~~~~ 256 (340)
++.. +++++.++|||||++++.++........... ......+.+.+++.++++++||+++....
T Consensus 121 ~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~ 200 (220)
T 3hnr_A 121 DDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFTRL 200 (220)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEEEC
T ss_pred hHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEeec
Confidence 9876 9999999999999999997655432211100 00112356899999999999999887776
Q ss_pred eCCcc
Q 019479 257 IGPKW 261 (340)
Q Consensus 257 ~~~~~ 261 (340)
....|
T Consensus 201 ~~~~w 205 (220)
T 3hnr_A 201 NHFVW 205 (220)
T ss_dssp SSSEE
T ss_pred cceEE
Confidence 65444
No 9
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.87 E-value=3.4e-21 Score=170.45 Aligned_cols=145 Identities=25% Similarity=0.366 Sum_probs=119.1
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCCCCCCCCCccEEEecCcc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAEDLPFPTDYADRYVSAGSI 188 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l 188 (340)
.++.+|||||||+|.++..+++.. .+|+|+|+|+.+++.++++. ..++++++++|++++++++++||+|++..++
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~l 113 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFV--KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIAA 113 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESCG
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhhh
Confidence 367899999999999999999884 59999999999999998763 3357999999999999888999999999999
Q ss_pred cccCCHHHHHHHHHHhcccCcEEEEEccCCCch-hHhhHhhh-------HhhcCCCHHHHHHHHHHCCCcEEEEEEeC
Q 019479 189 EYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTF-WLSRFFAD-------VWMLFPKEEEYIEWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 189 ~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~-~~~~~~~~-------~~~~~~~~~~~~~~l~~aGF~~v~~~~~~ 258 (340)
+|++|+..+++++.++|||||++++.+...+.. ....+... .....++.+++.++|+++||+++++....
T Consensus 114 ~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 191 (260)
T 1vl5_A 114 HHFPNPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFELEELHCFH 191 (260)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCEEEEEEEEE
T ss_pred HhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCeEEEEEEee
Confidence 999999999999999999999999986544322 11111111 11235689999999999999998887764
No 10
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.87 E-value=1.5e-21 Score=173.06 Aligned_cols=169 Identities=18% Similarity=0.298 Sum_probs=126.1
Q ss_pred hhhhhhhhhhcccCCCCchHHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC
Q 019479 79 FYRFLSIVYDHVINPGHWTEDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP 158 (340)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~ 158 (340)
+|+..+..|+..... ...+...++..... .++.+|||||||+|.++..+++ ++.+|+|+|+|+.+++.++++.
T Consensus 4 ~y~~~a~~y~~~~~~---~~~~~~~l~~~~~~-~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~- 76 (261)
T 3ege_A 4 IYNSIGKQYSQTRVP---DIRIVNAIINLLNL-PKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHP- 76 (261)
T ss_dssp ---------CCSBCC---CHHHHHHHHHHHCC-CTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCT-
T ss_pred HHHHHHHHHhhcccc---cHHHHHHHHHHhCC-CCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhcc-
Confidence 466666667654332 22344555555443 4788999999999999999998 4789999999999999887654
Q ss_pred CCCcEEEEcCCCCCCCCCCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCCc---hhHhhH----hhhHh
Q 019479 159 LKECTIIEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPT---FWLSRF----FADVW 231 (340)
Q Consensus 159 ~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~---~~~~~~----~~~~~ 231 (340)
+++++++|++++++++++||+|++..+++|++|+..+++++.++|| ||++++.+..... .+.... .....
T Consensus 77 --~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (261)
T 3ege_A 77 --QVEWFTGYAENLALPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDAL 153 (261)
T ss_dssp --TEEEECCCTTSCCSCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHH
T ss_pred --CCEEEECchhhCCCCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhh
Confidence 8999999999999888999999999999999999999999999999 9988888754321 122121 12223
Q ss_pred hcCCCHHHHHHHHHHCCCcEEEEEEeC
Q 019479 232 MLFPKEEEYIEWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 232 ~~~~~~~~~~~~l~~aGF~~v~~~~~~ 258 (340)
..+.+.+++. +|+++||+++++..+.
T Consensus 154 ~~~~~~~~~~-~l~~aGF~~v~~~~~~ 179 (261)
T 3ege_A 154 RFLPLDEQIN-LLQENTKRRVEAIPFL 179 (261)
T ss_dssp TSCCHHHHHH-HHHHHHCSEEEEEECC
T ss_pred hhCCCHHHHH-HHHHcCCCceeEEEec
Confidence 3466788899 9999999999988875
No 11
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.87 E-value=3.6e-22 Score=170.00 Aligned_cols=141 Identities=16% Similarity=0.052 Sum_probs=118.7
Q ss_pred CCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCcccccC-
Q 019479 114 NMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEYWP- 192 (340)
Q Consensus 114 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~- 192 (340)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++. ++++++++|+.++++++++||+|++..+++|++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~ 117 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQTH--PSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGP 117 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHC--TTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCT
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhC--CCCeEEeCcccccccCCCCeEEEEehhhHhcCCH
Confidence 789999999999999999998 679999999999999999874 579999999998888889999999999999997
Q ss_pred -CHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEeCC
Q 019479 193 -DPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRIGP 259 (340)
Q Consensus 193 -d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~ 259 (340)
+...+++++.++|||||++++..+.......... ......+++.+++.++++++||+++++.....
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 184 (203)
T 3h2b_A 118 GELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYH-PVATAYRWPLPELAQALETAGFQVTSSHWDPR 184 (203)
T ss_dssp TTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECC-SSSCEEECCHHHHHHHHHHTTEEEEEEEECTT
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhc-hhhhhccCCHHHHHHHHHHCCCcEEEEEecCC
Confidence 8889999999999999999998765443100000 00011246899999999999999999988765
No 12
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.86 E-value=2e-21 Score=166.45 Aligned_cols=171 Identities=18% Similarity=0.197 Sum_probs=132.7
Q ss_pred HHhhhhhhhhhhhhcccCCCCchHHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHH
Q 019479 75 EAFWFYRFLSIVYDHVINPGHWTEDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAK 154 (340)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~ 154 (340)
....+|+.....|...... ......++... +++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++
T Consensus 12 ~~~~~~~~~~~~y~~~~~~----~~~~~~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~ 82 (211)
T 3e23_A 12 DTLRFYRGNATAYAERQPR----SATLTKFLGEL---PAGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEAS 82 (211)
T ss_dssp HHHHHHHHSHHHHTTCCCC----CHHHHHHHTTS---CTTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccch----hHHHHHHHHhc---CCCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHH
Confidence 3456677777777765443 22334444433 36789999999999999999987 779999999999999999
Q ss_pred HhCCCCCcEEEEcCCCCCCCCCCCccEEEecCcccccC--CHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhh
Q 019479 155 QKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEYWP--DPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWM 232 (340)
Q Consensus 155 ~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~--d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~ 232 (340)
++. ++.++.+|+.+++ .+++||+|++..+++|++ +...+++++.++|||||++++..+......... .....
T Consensus 83 ~~~---~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~--~~~~~ 156 (211)
T 3e23_A 83 RRL---GRPVRTMLFHQLD-AIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDK--LARYY 156 (211)
T ss_dssp HHH---TSCCEECCGGGCC-CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECT--TSCEE
T ss_pred Hhc---CCceEEeeeccCC-CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccc--cchhc
Confidence 875 5778899998888 788899999999999998 677999999999999999999865433211110 11122
Q ss_pred cCCCHHHHHHHHHHCC-CcEEEEEEeCCc
Q 019479 233 LFPKEEEYIEWFQKAG-FKDVKLKRIGPK 260 (340)
Q Consensus 233 ~~~~~~~~~~~l~~aG-F~~v~~~~~~~~ 260 (340)
.+++.+++.++++++| |+++++......
T Consensus 157 ~~~~~~~~~~~l~~aG~f~~~~~~~~~~~ 185 (211)
T 3e23_A 157 NYPSEEWLRARYAEAGTWASVAVESSEGK 185 (211)
T ss_dssp CCCCHHHHHHHHHHHCCCSEEEEEEEEEE
T ss_pred cCCCHHHHHHHHHhCCCcEEEEEEeccCC
Confidence 3579999999999999 999998876543
No 13
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.86 E-value=8.1e-21 Score=169.12 Aligned_cols=160 Identities=24% Similarity=0.258 Sum_probs=128.4
Q ss_pred HHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC----CCCcEEEEcCCCCCCC
Q 019479 99 DMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECTIIEGDAEDLPF 174 (340)
Q Consensus 99 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~----~~~i~~~~~d~~~~~~ 174 (340)
.....++..+.. .++.+|||||||+|.++..+++.+ +.+|+|+|+|+.+++.++++.. ..+++++.+|+.++++
T Consensus 48 ~~~~~l~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 125 (273)
T 3bus_A 48 RLTDEMIALLDV-RSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPF 125 (273)
T ss_dssp HHHHHHHHHSCC-CTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS
T ss_pred HHHHHHHHhcCC-CCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCC
Confidence 334455555544 478899999999999999999876 7899999999999999987632 2479999999999988
Q ss_pred CCCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCCch---hHhhHhhh----H-hhcCCCHHHHHHHHHH
Q 019479 175 PTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTF---WLSRFFAD----V-WMLFPKEEEYIEWFQK 246 (340)
Q Consensus 175 ~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~---~~~~~~~~----~-~~~~~~~~~~~~~l~~ 246 (340)
++++||+|++..+++|++++..+++++.++|||||++++.++..... ........ . ...+.+.+++.+++++
T Consensus 126 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 205 (273)
T 3bus_A 126 EDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQ 205 (273)
T ss_dssp CTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHH
T ss_pred CCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHH
Confidence 88999999999999999999999999999999999999987543211 11111111 1 2246789999999999
Q ss_pred CCCcEEEEEEeCCc
Q 019479 247 AGFKDVKLKRIGPK 260 (340)
Q Consensus 247 aGF~~v~~~~~~~~ 260 (340)
+||+++++..+...
T Consensus 206 aGf~~~~~~~~~~~ 219 (273)
T 3bus_A 206 AELVVTSTVDISAQ 219 (273)
T ss_dssp TTCEEEEEEECHHH
T ss_pred cCCeEEEEEECcHh
Confidence 99999999887643
No 14
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.86 E-value=3.4e-21 Score=168.49 Aligned_cols=155 Identities=16% Similarity=0.171 Sum_probs=125.1
Q ss_pred HHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCC--CCC
Q 019479 98 EDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDL--PFP 175 (340)
Q Consensus 98 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~--~~~ 175 (340)
..+...+.......+++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++ ++++.+|+.+. +++
T Consensus 26 ~~~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~-----~~~~~~d~~~~~~~~~ 98 (240)
T 3dli_A 26 ELVKARLRRYIPYFKGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK-----FNVVKSDAIEYLKSLP 98 (240)
T ss_dssp HHHHHHHGGGGGGTTTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT-----SEEECSCHHHHHHTSC
T ss_pred HHHHHHHHHHHhhhcCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh-----cceeeccHHHHhhhcC
Confidence 3455555555555567899999999999999999987 67899999999999999954 88999998774 778
Q ss_pred CCCccEEEecCcccccCCH--HHHHHHHHHhcccCcEEEEEccCCCchhHh--hHhhhHhhcCCCHHHHHHHHHHCCCcE
Q 019479 176 TDYADRYVSAGSIEYWPDP--QRGIKEAYRVLKIGGKACVIGPVYPTFWLS--RFFADVWMLFPKEEEYIEWFQKAGFKD 251 (340)
Q Consensus 176 ~~~fD~v~~~~~l~~~~d~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~aGF~~ 251 (340)
+++||+|++..+++|++++ ..+++++.++|||||++++..+........ .+.......+.+.+++.++++++||++
T Consensus 99 ~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~ 178 (240)
T 3dli_A 99 DKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRD 178 (240)
T ss_dssp TTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEE
T ss_pred CCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeE
Confidence 8999999999999999955 899999999999999999988765433221 111112234678999999999999999
Q ss_pred EEEEEeCC
Q 019479 252 VKLKRIGP 259 (340)
Q Consensus 252 v~~~~~~~ 259 (340)
+++....+
T Consensus 179 ~~~~~~~~ 186 (240)
T 3dli_A 179 VKIEFFEE 186 (240)
T ss_dssp EEEEEECC
T ss_pred EEEEEecc
Confidence 99888753
No 15
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.86 E-value=3.7e-21 Score=165.65 Aligned_cols=145 Identities=21% Similarity=0.194 Sum_probs=123.3
Q ss_pred CCCCEEEEEcCccchHHHHHHHhC-CCceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCCCCCCCCCccEEEecCc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAEDLPFPTDYADRYVSAGS 187 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~ 187 (340)
.++.+|||+|||+|.++..+++.. |..+|+|+|+|+.+++.++++. ..++++++++|+.++++++++||+|++..+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 115 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAFT 115 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEESC
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeehh
Confidence 467899999999999999999986 5689999999999999999773 235799999999998888899999999999
Q ss_pred ccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEeCCc
Q 019479 188 IEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRIGPK 260 (340)
Q Consensus 188 l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~~ 260 (340)
++|++++..+++++.++|||||++++.+........ .......++.+++.++++++||++++.......
T Consensus 116 l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~ 184 (219)
T 3dh0_A 116 FHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDK----GPPPEEVYSEWEVGLILEDAGIRVGRVVEVGKY 184 (219)
T ss_dssp GGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSS----SCCGGGSCCHHHHHHHHHHTTCEEEEEEEETTT
T ss_pred hhhcCCHHHHHHHHHHHhCCCeEEEEEEeccccccc----CCchhcccCHHHHHHHHHHCCCEEEEEEeeCCc
Confidence 999999999999999999999999998765443211 111223568999999999999999999887653
No 16
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.86 E-value=2.9e-21 Score=165.89 Aligned_cols=143 Identities=20% Similarity=0.144 Sum_probs=114.9
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCccccc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEYW 191 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 191 (340)
.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++. ...+++++++|+.++ +++++||+|++..+++|+
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~~-~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~ 120 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGRH-GLDNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHV 120 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGGG-CCTTEEEEECCTTSC-CCSSCEEEEEEESCGGGS
T ss_pred CCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHhc-CCCCeEEEecccccC-CCCCceeEEEEechhhcC
Confidence 46789999999999999999998 78999999999999999983 336899999999887 678899999999999999
Q ss_pred CCH--HHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhh----H-------------hhcCCCHHHHHHHHHHCCCcEE
Q 019479 192 PDP--QRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFAD----V-------------WMLFPKEEEYIEWFQKAGFKDV 252 (340)
Q Consensus 192 ~d~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~----~-------------~~~~~~~~~~~~~l~~aGF~~v 252 (340)
+++ ..+++++.++|||||++++.+...+.......... . ...+.+.+++.++++++||+++
T Consensus 121 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~ 200 (218)
T 3ou2_A 121 PDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWSCS 200 (218)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCEEE
Confidence 986 78999999999999999999776543322221110 0 1225689999999999999965
Q ss_pred EEEEeC
Q 019479 253 KLKRIG 258 (340)
Q Consensus 253 ~~~~~~ 258 (340)
......
T Consensus 201 ~~~~~~ 206 (218)
T 3ou2_A 201 VDEVHP 206 (218)
T ss_dssp EEEEET
T ss_pred eeeccc
Confidence 555443
No 17
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.86 E-value=2.4e-21 Score=173.77 Aligned_cols=144 Identities=20% Similarity=0.320 Sum_probs=119.2
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC----CCcEEEEcCCCCCC-CCCCCccEEEecCc
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL----KECTIIEGDAEDLP-FPTDYADRYVSAGS 187 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~----~~i~~~~~d~~~~~-~~~~~fD~v~~~~~ 187 (340)
++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++... ++++++++|+.+++ +.+++||+|++..+
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 145 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAV 145 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESC
T ss_pred CCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECch
Confidence 4789999999999999999998 78999999999999999987422 57899999998876 67889999999999
Q ss_pred ccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHh--------hh---------HhhcCCCHHHHHHHHHHCCCc
Q 019479 188 IEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFF--------AD---------VWMLFPKEEEYIEWFQKAGFK 250 (340)
Q Consensus 188 l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~--------~~---------~~~~~~~~~~~~~~l~~aGF~ 250 (340)
++|++++..+++++.++|||||++++..+........... .. .+..+++.+++.++++++||+
T Consensus 146 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~ 225 (285)
T 4htf_A 146 LEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAGWQ 225 (285)
T ss_dssp GGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHTTCE
T ss_pred hhcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHCCCc
Confidence 9999999999999999999999999987654321111110 00 011356899999999999999
Q ss_pred EEEEEEeC
Q 019479 251 DVKLKRIG 258 (340)
Q Consensus 251 ~v~~~~~~ 258 (340)
++++..+.
T Consensus 226 v~~~~~~~ 233 (285)
T 4htf_A 226 IMGKTGVR 233 (285)
T ss_dssp EEEEEEES
T ss_pred eeeeeeEE
Confidence 99998874
No 18
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.86 E-value=6.8e-21 Score=163.50 Aligned_cols=157 Identities=22% Similarity=0.361 Sum_probs=124.1
Q ss_pred HHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC----CCCcEEEEcCCCCCCC
Q 019479 99 DMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECTIIEGDAEDLPF 174 (340)
Q Consensus 99 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~----~~~i~~~~~d~~~~~~ 174 (340)
.+...++..... +++ +|||+|||+|.++..+++. ++.+|+|+|+|+.+++.++++.. ..+++++++|+.++++
T Consensus 31 ~~~~~~~~~~~~-~~~-~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 107 (219)
T 3dlc_A 31 IIAENIINRFGI-TAG-TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPI 107 (219)
T ss_dssp HHHHHHHHHHCC-CEE-EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSS
T ss_pred HHHHHHHHhcCC-CCC-EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCC
Confidence 344555554443 234 9999999999999999998 67899999999999999998722 3579999999999888
Q ss_pred CCCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHh---h-------h---HhhcCCCHHHHH
Q 019479 175 PTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFF---A-------D---VWMLFPKEEEYI 241 (340)
Q Consensus 175 ~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~---~-------~---~~~~~~~~~~~~ 241 (340)
++++||+|++..+++|++++..+++++.++|||||++++.+............ . . .....++.+++.
T Consensus 108 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (219)
T 3dlc_A 108 EDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQ 187 (219)
T ss_dssp CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHH
T ss_pred CcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHH
Confidence 88999999999999999999999999999999999999987554432111110 0 0 111234679999
Q ss_pred HHHHHCCCcEEEEEEeC
Q 019479 242 EWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 242 ~~l~~aGF~~v~~~~~~ 258 (340)
++|+++||+++++....
T Consensus 188 ~~l~~aGf~~v~~~~~~ 204 (219)
T 3dlc_A 188 NVLDEIGISSYEIILGD 204 (219)
T ss_dssp HHHHHHTCSSEEEEEET
T ss_pred HHHHHcCCCeEEEEecC
Confidence 99999999999887664
No 19
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.86 E-value=5.3e-21 Score=170.62 Aligned_cols=147 Identities=21% Similarity=0.300 Sum_probs=121.2
Q ss_pred CCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCCCCCCCCCccEEEecCc
Q 019479 111 FDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAEDLPFPTDYADRYVSAGS 187 (340)
Q Consensus 111 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~ 187 (340)
..++.+|||||||+|.++..+++..|+.+|+|+|+|+.+++.++++. ..++++++.+|+.++++++++||+|++..+
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFV 114 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESC
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEech
Confidence 35789999999999999999999988899999999999999999873 345799999999998888899999999999
Q ss_pred ccccCCHHHHHHHHHHhcccCcEEEEEccCCCc-------hhHhhHhh---h----HhhcCCCHHHHHHHHHHCCCcEEE
Q 019479 188 IEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPT-------FWLSRFFA---D----VWMLFPKEEEYIEWFQKAGFKDVK 253 (340)
Q Consensus 188 l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~-------~~~~~~~~---~----~~~~~~~~~~~~~~l~~aGF~~v~ 253 (340)
++|++++..+++++.++|||||++++.++.... ........ . ......+.+++.++|+++||++++
T Consensus 115 l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~v~ 194 (276)
T 3mgg_A 115 LEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQESGFEKIR 194 (276)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHTTCEEEE
T ss_pred hhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHCCCCeEE
Confidence 999999999999999999999999998754321 11111111 1 111234668899999999999998
Q ss_pred EEEe
Q 019479 254 LKRI 257 (340)
Q Consensus 254 ~~~~ 257 (340)
+...
T Consensus 195 ~~~~ 198 (276)
T 3mgg_A 195 VEPR 198 (276)
T ss_dssp EEEE
T ss_pred EeeE
Confidence 8876
No 20
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.86 E-value=5.7e-21 Score=168.40 Aligned_cols=160 Identities=17% Similarity=0.123 Sum_probs=126.4
Q ss_pred chHHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---C-CCCcEEEEcCCCC
Q 019479 96 WTEDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---P-LKECTIIEGDAED 171 (340)
Q Consensus 96 ~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~-~~~i~~~~~d~~~ 171 (340)
........++..... .++.+|||||||+|.++..+++.+ +.+|+|+|+|+.+++.++++. . ..+++++++|+.+
T Consensus 20 ~~~~~~~~l~~~~~~-~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~ 97 (256)
T 1nkv_A 20 FTEEKYATLGRVLRM-KPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAG 97 (256)
T ss_dssp CCHHHHHHHHHHTCC-CTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTT
T ss_pred CCHHHHHHHHHhcCC-CCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHh
Confidence 344455555655554 478899999999999999999986 679999999999999998763 2 2479999999998
Q ss_pred CCCCCCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhh-----HhhhHhhcCCCHHHHHHHHHH
Q 019479 172 LPFPTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSR-----FFADVWMLFPKEEEYIEWFQK 246 (340)
Q Consensus 172 ~~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~ 246 (340)
+++ +++||+|++..+++|++++..+++++.++|||||++++.++......... +.......+.+.+++.+++++
T Consensus 98 ~~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 176 (256)
T 1nkv_A 98 YVA-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDD 176 (256)
T ss_dssp CCC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHT
T ss_pred CCc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHH
Confidence 877 78899999999999999999999999999999999999865332111111 111112246789999999999
Q ss_pred CCCcEEEEEEeC
Q 019479 247 AGFKDVKLKRIG 258 (340)
Q Consensus 247 aGF~~v~~~~~~ 258 (340)
+||+++++....
T Consensus 177 aGf~~~~~~~~~ 188 (256)
T 1nkv_A 177 LGYDVVEMVLAD 188 (256)
T ss_dssp TTBCCCEEEECC
T ss_pred CCCeeEEEEeCC
Confidence 999998876654
No 21
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.86 E-value=1.1e-20 Score=165.06 Aligned_cols=145 Identities=21% Similarity=0.315 Sum_probs=120.4
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCCCCCCCCCccEEEecCcc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAEDLPFPTDYADRYVSAGSI 188 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l 188 (340)
.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++. ..++++++++|++++++++++||+|++..++
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l 97 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPY--VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYAA 97 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESCG
T ss_pred CCCCEEEEEccCcCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECCch
Confidence 47889999999999999999988 459999999999999998763 2357999999999998888999999999999
Q ss_pred cccCCHHHHHHHHHHhcccCcEEEEEccCCCchh-HhhHhh-------hHhhcCCCHHHHHHHHHHCCCcEEEEEEeC
Q 019479 189 EYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFW-LSRFFA-------DVWMLFPKEEEYIEWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 189 ~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~-~~~~~~-------~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~ 258 (340)
+|++++..+++++.++|||||++++.+...+... ...+.. ......++.+++.++|+++||+++++....
T Consensus 98 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~~~ 175 (239)
T 1xxl_A 98 HHFSDVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQLAYQDIQKWN 175 (239)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCCCcEEEEEeec
Confidence 9999999999999999999999999876544322 221111 111235689999999999999998887763
No 22
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.86 E-value=1.1e-20 Score=170.41 Aligned_cols=147 Identities=17% Similarity=0.195 Sum_probs=122.3
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC----CCCCcEEEEcCCCCCCCCCCCccEEEecCc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE----PLKECTIIEGDAEDLPFPTDYADRYVSAGS 187 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~----~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~ 187 (340)
.++.+|||||||+|.++..+++.+ +.+|+|+|+|+.+++.++++. ..++++++++|+.++++++++||+|++..+
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 159 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDA 159 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecch
Confidence 578899999999999999999986 579999999999999998763 235799999999999988899999999999
Q ss_pred ccccCCHHHHHHHHHHhcccCcEEEEEccCCCchh----HhhHhhhH-hhcCCCHHHHHHHHHHCCCcEEEEEEeCC
Q 019479 188 IEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFW----LSRFFADV-WMLFPKEEEYIEWFQKAGFKDVKLKRIGP 259 (340)
Q Consensus 188 l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~l~~aGF~~v~~~~~~~ 259 (340)
++|++++..+++++.++|||||++++.++...... ........ ...+.+.+++.++++++||+++++..+..
T Consensus 160 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~ 236 (297)
T 2o57_A 160 FLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLRTFSRPD 236 (297)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEEEEECHH
T ss_pred hhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEEEECch
Confidence 99999999999999999999999999876443211 11111111 12356899999999999999999988753
No 23
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.85 E-value=4.6e-21 Score=167.51 Aligned_cols=145 Identities=23% Similarity=0.280 Sum_probs=118.7
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCc-eEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCccccc
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEYW 191 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 191 (340)
++.+|||||||+|.++..+++. +. +|+|+|+|+.+++.++++....+++++++|+.++++++++||+|++..+++|+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 120 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEH--GASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHYV 120 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESCGGGC
T ss_pred CCCEEEEEcCcCCHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEecccccc
Confidence 6789999999999999999987 44 99999999999999999876678999999998888778899999999999999
Q ss_pred CCHHHHHHHHHHhcccCcEEEEEccCCCc------hh-----------Hh----------hHhh-hHhhcCCCHHHHHHH
Q 019479 192 PDPQRGIKEAYRVLKIGGKACVIGPVYPT------FW-----------LS----------RFFA-DVWMLFPKEEEYIEW 243 (340)
Q Consensus 192 ~d~~~~l~~~~~~LkpgG~l~i~~~~~~~------~~-----------~~----------~~~~-~~~~~~~~~~~~~~~ 243 (340)
++...+++++.++|||||++++..+.... .+ .. .++. ......++.+++.++
T Consensus 121 ~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~ 200 (243)
T 3bkw_A 121 EDVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKHHRTVGTTLNA 200 (243)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEEECCHHHHHHH
T ss_pred chHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCceEEEeccHHHHHHH
Confidence 99999999999999999999987643110 00 00 0000 011123589999999
Q ss_pred HHHCCCcEEEEEEeCC
Q 019479 244 FQKAGFKDVKLKRIGP 259 (340)
Q Consensus 244 l~~aGF~~v~~~~~~~ 259 (340)
|+++||+++++....+
T Consensus 201 l~~aGF~~~~~~~~~~ 216 (243)
T 3bkw_A 201 LIRSGFAIEHVEEFCP 216 (243)
T ss_dssp HHHTTCEEEEEEECCC
T ss_pred HHHcCCEeeeeccCCC
Confidence 9999999999987643
No 24
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.85 E-value=3.1e-20 Score=168.83 Aligned_cols=156 Identities=17% Similarity=0.188 Sum_probs=126.6
Q ss_pred HHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC----CCCcEEEEcCCCCCCCCCC
Q 019479 102 DEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECTIIEGDAEDLPFPTD 177 (340)
Q Consensus 102 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~----~~~i~~~~~d~~~~~~~~~ 177 (340)
..++..+....++.+|||||||+|.++..+++.+ +.+|+|+|+|+.+++.|+++.. ..+++++++|+.+++++++
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 184 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKG 184 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTT
T ss_pred HHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCC
Confidence 3455555534578999999999999999999986 6899999999999999997632 2479999999999888889
Q ss_pred CccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCCch------hHhhHhhhHhhcCCCHHHHHHHHHHCCCcE
Q 019479 178 YADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTF------WLSRFFADVWMLFPKEEEYIEWFQKAGFKD 251 (340)
Q Consensus 178 ~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~ 251 (340)
+||+|++..+++|+ ++..+++++.++|||||++++.++..... ............+.+.+++.++++++||++
T Consensus 185 ~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~ 263 (312)
T 3vc1_A 185 AVTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVP 263 (312)
T ss_dssp CEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEE
T ss_pred CEeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEE
Confidence 99999999999999 69999999999999999999987543321 111111122234678999999999999999
Q ss_pred EEEEEeCC
Q 019479 252 VKLKRIGP 259 (340)
Q Consensus 252 v~~~~~~~ 259 (340)
+++..+..
T Consensus 264 ~~~~~~~~ 271 (312)
T 3vc1_A 264 HTIVDLTP 271 (312)
T ss_dssp EEEEECHH
T ss_pred EEEEeCCH
Confidence 99998864
No 25
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.85 E-value=4.3e-21 Score=167.93 Aligned_cols=154 Identities=14% Similarity=0.053 Sum_probs=119.9
Q ss_pred HHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC---CCcEEEEcCCCCCCCCCC
Q 019479 101 RDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL---KECTIIEGDAEDLPFPTD 177 (340)
Q Consensus 101 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~---~~i~~~~~d~~~~~~~~~ 177 (340)
...++.......++.+|||||||+|.++..+++.. ..+|+++|+|+.+++.++++... .+++++++|+.+++++++
T Consensus 67 ~~~l~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~ 145 (241)
T 2ex4_A 67 LQRFLREGPNKTGTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPD 145 (241)
T ss_dssp HHGGGC----CCCCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSS
T ss_pred HHHHHHhcccCCCCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCC
Confidence 33444433323368899999999999999988875 56999999999999999988653 358899999988887777
Q ss_pred CccEEEecCcccccCCHH--HHHHHHHHhcccCcEEEEEccCCCchhHhhHhhh-HhhcCCCHHHHHHHHHHCCCcEEEE
Q 019479 178 YADRYVSAGSIEYWPDPQ--RGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFAD-VWMLFPKEEEYIEWFQKAGFKDVKL 254 (340)
Q Consensus 178 ~fD~v~~~~~l~~~~d~~--~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~aGF~~v~~ 254 (340)
+||+|++..+++|++++. .+++++.++|||||++++.++..... ..+.. .....++.+++.++++++||+++++
T Consensus 146 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 222 (241)
T 2ex4_A 146 SYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEG---VILDDVDSSVCRDLDVVRRIICSAGLSLLAE 222 (241)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSS---EEEETTTTEEEEBHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCc---ceecccCCcccCCHHHHHHHHHHcCCeEEEe
Confidence 899999999999998865 89999999999999999987644320 00000 0111347999999999999999998
Q ss_pred EEeC
Q 019479 255 KRIG 258 (340)
Q Consensus 255 ~~~~ 258 (340)
....
T Consensus 223 ~~~~ 226 (241)
T 2ex4_A 223 ERQE 226 (241)
T ss_dssp EECC
T ss_pred eecC
Confidence 8764
No 26
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.85 E-value=1.7e-20 Score=168.21 Aligned_cols=156 Identities=17% Similarity=0.210 Sum_probs=121.7
Q ss_pred HHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCC-ceEEEEeCCHHHHHHHHHhCC--CCCcEEEEcCCCCCCCCCC
Q 019479 101 RDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDA-KNVTILDQSPHQLAKAKQKEP--LKECTIIEGDAEDLPFPTD 177 (340)
Q Consensus 101 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~g~D~s~~~~~~a~~~~~--~~~i~~~~~d~~~~~~~~~ 177 (340)
...++.......++.+|||||||+|.++..+++.+|. .+|+|+|+|+.+++.++++.. ..+++++++|+.++++ ++
T Consensus 10 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~-~~ 88 (284)
T 3gu3_A 10 VSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIEL-ND 88 (284)
T ss_dssp HHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCC-SS
T ss_pred HHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCc-CC
Confidence 3333433333357899999999999999999999884 899999999999999998732 2379999999998887 46
Q ss_pred CccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCC-----Cc-------------hhHhhHhh----hHhhcCC
Q 019479 178 YADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVY-----PT-------------FWLSRFFA----DVWMLFP 235 (340)
Q Consensus 178 ~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~-----~~-------------~~~~~~~~----~~~~~~~ 235 (340)
+||+|++..+++|++|+..++++++++|||||++++.++.. .. ......+. .....+.
T Consensus 89 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (284)
T 3gu3_A 89 KYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNGKDGN 168 (284)
T ss_dssp CEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTCCCTT
T ss_pred CeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhccccc
Confidence 89999999999999999999999999999999999987761 10 00111111 1112245
Q ss_pred CHHHHHHHHHHCCCcEEEEEEe
Q 019479 236 KEEEYIEWFQKAGFKDVKLKRI 257 (340)
Q Consensus 236 ~~~~~~~~l~~aGF~~v~~~~~ 257 (340)
+.+++.++|+++||+++++...
T Consensus 169 ~~~~l~~~l~~aGF~~v~~~~~ 190 (284)
T 3gu3_A 169 IGMKIPIYLSELGVKNIECRVS 190 (284)
T ss_dssp GGGTHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCeEEEEEc
Confidence 6778999999999999988654
No 27
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.85 E-value=1.1e-20 Score=166.41 Aligned_cols=154 Identities=23% Similarity=0.240 Sum_probs=122.4
Q ss_pred hccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEE
Q 019479 104 ALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYV 183 (340)
Q Consensus 104 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~ 183 (340)
+...... .++.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.++++....+++++++|+.++++++++||+|+
T Consensus 36 l~~~~~~-~~~~~vLD~GcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~ 113 (253)
T 3g5l_A 36 LKKMLPD-FNQKTVLDLGCGFGWHCIYAAEHG-AKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVL 113 (253)
T ss_dssp HHTTCCC-CTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEE
T ss_pred HHHhhhc-cCCCEEEEECCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEE
Confidence 3444332 368899999999999999999983 23999999999999999998777789999999999888889999999
Q ss_pred ecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCCch------h------------HhhHhh-----------hHhhcC
Q 019479 184 SAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTF------W------------LSRFFA-----------DVWMLF 234 (340)
Q Consensus 184 ~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~------~------------~~~~~~-----------~~~~~~ 234 (340)
+..+++|++++..+++++.++|||||++++..+..... + ...++. ......
T Consensus 114 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (253)
T 3g5l_A 114 SSLALHYIASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKYH 193 (253)
T ss_dssp EESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEEC
T ss_pred EchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCccEe
Confidence 99999999999999999999999999999874321100 0 000000 001113
Q ss_pred CCHHHHHHHHHHCCCcEEEEEEeCC
Q 019479 235 PKEEEYIEWFQKAGFKDVKLKRIGP 259 (340)
Q Consensus 235 ~~~~~~~~~l~~aGF~~v~~~~~~~ 259 (340)
++.+++.++|+++||+++++.+..+
T Consensus 194 ~t~~~~~~~l~~aGF~~~~~~e~~~ 218 (253)
T 3g5l_A 194 RTVTTYIQTLLKNGFQINSVIEPEP 218 (253)
T ss_dssp CCHHHHHHHHHHTTEEEEEEECCCC
T ss_pred cCHHHHHHHHHHcCCeeeeeecCCC
Confidence 4899999999999999999987653
No 28
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.85 E-value=3.3e-20 Score=161.07 Aligned_cols=153 Identities=21% Similarity=0.245 Sum_probs=123.0
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCC--------CcEEEEcCCCCCCCCCCCccEEE
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK--------ECTIIEGDAEDLPFPTDYADRYV 183 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~--------~i~~~~~d~~~~~~~~~~fD~v~ 183 (340)
+++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++.... +++++++|+..+++++++||+|+
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEE
Confidence 36789999999999999999998 779999999999999999875432 46899999999888889999999
Q ss_pred ecCcccccCCHH---HHHHHHHHhcccCcEEEEEccCCCch--hH-hhHhhh---------------------HhhcCCC
Q 019479 184 SAGSIEYWPDPQ---RGIKEAYRVLKIGGKACVIGPVYPTF--WL-SRFFAD---------------------VWMLFPK 236 (340)
Q Consensus 184 ~~~~l~~~~d~~---~~l~~~~~~LkpgG~l~i~~~~~~~~--~~-~~~~~~---------------------~~~~~~~ 236 (340)
+..+++|++++. .+++++.++|||||++++.++..... .. ...... ....+++
T Consensus 107 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (235)
T 3sm3_A 107 MQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFT 186 (235)
T ss_dssp EESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBC
T ss_pred EcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCC
Confidence 999999999988 89999999999999999987654311 11 111110 0123668
Q ss_pred HHHHHHHHHHCCCcEEEEEEeCCccccccc
Q 019479 237 EEEYIEWFQKAGFKDVKLKRIGPKWYRGVR 266 (340)
Q Consensus 237 ~~~~~~~l~~aGF~~v~~~~~~~~~~~~~~ 266 (340)
.+++.++|+++||+++++.........+.+
T Consensus 187 ~~~l~~ll~~aGf~~~~~~~~~~~~~~g~~ 216 (235)
T 3sm3_A 187 EKELVFLLTDCRFEIDYFRVKELETRTGNK 216 (235)
T ss_dssp HHHHHHHHHTTTEEEEEEEEEEEECTTSCE
T ss_pred HHHHHHHHHHcCCEEEEEEecceeeccCCc
Confidence 999999999999999999876544333333
No 29
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.84 E-value=4.3e-20 Score=162.95 Aligned_cols=149 Identities=18% Similarity=0.175 Sum_probs=119.9
Q ss_pred HHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCc
Q 019479 100 MRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYA 179 (340)
Q Consensus 100 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~f 179 (340)
....++..+.. .++.+|||||||+|.++..+++.+|+.+|+|+|+|+.+++.++++ .++++++++|+++++ ++++|
T Consensus 21 ~~~~l~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~--~~~~~~~~~d~~~~~-~~~~f 96 (259)
T 2p35_A 21 PARDLLAQVPL-ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR--LPNTNFGKADLATWK-PAQKA 96 (259)
T ss_dssp HHHHHHTTCCC-SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH--STTSEEEECCTTTCC-CSSCE
T ss_pred HHHHHHHhcCC-CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh--CCCcEEEECChhhcC-ccCCc
Confidence 33455555544 467899999999999999999998889999999999999999987 368999999999887 77889
Q ss_pred cEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHh----hHhh------------hHhhcCCCHHHHHHH
Q 019479 180 DRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLS----RFFA------------DVWMLFPKEEEYIEW 243 (340)
Q Consensus 180 D~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~----~~~~------------~~~~~~~~~~~~~~~ 243 (340)
|+|+++.+++|++++..+++++.++|||||++++..+........ .... .....+.+.+++.++
T Consensus 97 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (259)
T 2p35_A 97 DLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYFNA 176 (259)
T ss_dssp EEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHHHHHHH
T ss_pred CEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHHHHHHH
Confidence 999999999999999999999999999999999987543221111 1100 012235789999999
Q ss_pred HHHCCCcEE
Q 019479 244 FQKAGFKDV 252 (340)
Q Consensus 244 l~~aGF~~v 252 (340)
|+++||++.
T Consensus 177 l~~aGf~v~ 185 (259)
T 2p35_A 177 LSPKSSRVD 185 (259)
T ss_dssp HGGGEEEEE
T ss_pred HHhcCCceE
Confidence 999999743
No 30
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.84 E-value=3.6e-20 Score=163.77 Aligned_cols=144 Identities=21% Similarity=0.222 Sum_probs=115.4
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC--CCCCcEEEEcCCCCCCCCCCCccEEEecCccc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE--PLKECTIIEGDAEDLPFPTDYADRYVSAGSIE 189 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~--~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~ 189 (340)
.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++. ..++++++++|++++++++++||+|++..++|
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 115 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLWH 115 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGG
T ss_pred CCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCchh
Confidence 46889999999999999999987 689999999999999999885 23679999999999888888999999999999
Q ss_pred ccCCHHHHHHHHHHhcccCcEEEEEccCCC-ch---h---HhhHhhhHh------hcCCCHHHHHHHHHHCCCcEEEEEE
Q 019479 190 YWPDPQRGIKEAYRVLKIGGKACVIGPVYP-TF---W---LSRFFADVW------MLFPKEEEYIEWFQKAGFKDVKLKR 256 (340)
Q Consensus 190 ~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~-~~---~---~~~~~~~~~------~~~~~~~~~~~~l~~aGF~~v~~~~ 256 (340)
|++|+..+++++.++|||||++++.-...+ .. + ......... ..+.+.+++.++|+++||+++.+..
T Consensus 116 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 195 (263)
T 2yqz_A 116 LVPDWPKVLAEAIRVLKPGGALLEGWDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGLKPRTREV 195 (263)
T ss_dssp GCTTHHHHHHHHHHHEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred hcCCHHHHHHHHHHHCCCCcEEEEEecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCCCcceEEE
Confidence 999999999999999999999988722111 11 1 111111111 1134678999999999999876644
Q ss_pred e
Q 019479 257 I 257 (340)
Q Consensus 257 ~ 257 (340)
.
T Consensus 196 ~ 196 (263)
T 2yqz_A 196 A 196 (263)
T ss_dssp E
T ss_pred e
Confidence 3
No 31
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.84 E-value=2.7e-20 Score=170.72 Aligned_cols=153 Identities=20% Similarity=0.156 Sum_probs=120.8
Q ss_pred HhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC----CCCCcEEEEcCCCCCCCCCCC
Q 019479 103 EALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE----PLKECTIIEGDAEDLPFPTDY 178 (340)
Q Consensus 103 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~----~~~~i~~~~~d~~~~~~~~~~ 178 (340)
.++..... .+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.++++. ..++++++.+|+. .+++. +
T Consensus 160 ~~~~~~~~-~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~ 235 (332)
T 3i53_A 160 GIAAKYDW-AALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-G 235 (332)
T ss_dssp TGGGSSCC-GGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-S
T ss_pred HHHHhCCC-CCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-C
Confidence 33444433 3568999999999999999999999999999999 99999999762 1367999999997 34444 7
Q ss_pred ccEEEecCcccccCCH--HHHHHHHHHhcccCcEEEEEccCCCch----hHhh-HhhhHhhcCCCHHHHHHHHHHCCCcE
Q 019479 179 ADRYVSAGSIEYWPDP--QRGIKEAYRVLKIGGKACVIGPVYPTF----WLSR-FFADVWMLFPKEEEYIEWFQKAGFKD 251 (340)
Q Consensus 179 fD~v~~~~~l~~~~d~--~~~l~~~~~~LkpgG~l~i~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~l~~aGF~~ 251 (340)
||+|++.+++|+++|. .++|++++++|||||+|++.+...+.. .... .........++.++|.++++++||++
T Consensus 236 ~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 315 (332)
T 3i53_A 236 AGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAV 315 (332)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEE
T ss_pred CcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEE
Confidence 9999999999999986 689999999999999999998765532 1110 11111223679999999999999999
Q ss_pred EEEEEeCC
Q 019479 252 VKLKRIGP 259 (340)
Q Consensus 252 v~~~~~~~ 259 (340)
+++.....
T Consensus 316 ~~~~~~~~ 323 (332)
T 3i53_A 316 RAAHPISY 323 (332)
T ss_dssp EEEEECSS
T ss_pred EEEEECCC
Confidence 99987753
No 32
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.84 E-value=9.3e-20 Score=164.85 Aligned_cols=155 Identities=25% Similarity=0.270 Sum_probs=123.6
Q ss_pred HHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC----CCCcEEEEcCCCCCCCCCC
Q 019479 102 DEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECTIIEGDAEDLPFPTD 177 (340)
Q Consensus 102 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~----~~~i~~~~~d~~~~~~~~~ 177 (340)
..++..+.. .++.+|||||||+|.++..+++.++ .+|+|+|+|+.+++.|+++.. ..+++++++|+.++ ++
T Consensus 62 ~~~~~~~~~-~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~ 136 (302)
T 3hem_A 62 KLALDKLNL-EPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DE 136 (302)
T ss_dssp HHHHHTTCC-CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CC
T ss_pred HHHHHHcCC-CCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CC
Confidence 344454443 4788999999999999999999875 899999999999999998732 23799999999876 68
Q ss_pred CccEEEecCcccccCCH---------HHHHHHHHHhcccCcEEEEEccCCCchhHh---------------hHhhhH---
Q 019479 178 YADRYVSAGSIEYWPDP---------QRGIKEAYRVLKIGGKACVIGPVYPTFWLS---------------RFFADV--- 230 (340)
Q Consensus 178 ~fD~v~~~~~l~~~~d~---------~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~---------------~~~~~~--- 230 (340)
+||+|++..+++|++|+ ..+++++.++|||||++++.+......... .++...
T Consensus 137 ~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 216 (302)
T 3hem_A 137 PVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFP 216 (302)
T ss_dssp CCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCT
T ss_pred CccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCC
Confidence 89999999999999775 699999999999999999987665433211 111111
Q ss_pred hhcCCCHHHHHHHHHHCCCcEEEEEEeCCcc
Q 019479 231 WMLFPKEEEYIEWFQKAGFKDVKLKRIGPKW 261 (340)
Q Consensus 231 ~~~~~~~~~~~~~l~~aGF~~v~~~~~~~~~ 261 (340)
...+.+.+++.++++++||+++++..++..+
T Consensus 217 ~~~~~s~~~~~~~l~~aGf~~~~~~~~~~~y 247 (302)
T 3hem_A 217 GGRLPRISQVDYYSSNAGWKVERYHRIGANY 247 (302)
T ss_dssp TCCCCCHHHHHHHHHHHTCEEEEEEECGGGH
T ss_pred CCCCCCHHHHHHHHHhCCcEEEEEEeCchhH
Confidence 1135689999999999999999999887654
No 33
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.83 E-value=3.7e-20 Score=173.01 Aligned_cols=147 Identities=23% Similarity=0.245 Sum_probs=120.1
Q ss_pred CCCCEEEEEcCccchHHHHHHHhC-CCceEEEEeCCHHHHHHHHHhC-----------CCCCcEEEEcCCCCC------C
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKE-----------PLKECTIIEGDAEDL------P 173 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~-----------~~~~i~~~~~d~~~~------~ 173 (340)
.++.+|||||||+|.++..+++.+ ++.+|+|+|+|+.+++.|+++. ..++++++++|++++ +
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 368899999999999999999986 6789999999999999999863 236899999999886 8
Q ss_pred CCCCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhh------HhhhHhhcCCCHHHHHHHHHHC
Q 019479 174 FPTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSR------FFADVWMLFPKEEEYIEWFQKA 247 (340)
Q Consensus 174 ~~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~a 247 (340)
+++++||+|+++.+++|++|+..+++++.++|||||++++.+.......... ..........+.+++.++|+++
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a 241 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEA 241 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHT
T ss_pred CCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHC
Confidence 8889999999999999999999999999999999999999865433211100 1111122356789999999999
Q ss_pred CCcEEEEEEeC
Q 019479 248 GFKDVKLKRIG 258 (340)
Q Consensus 248 GF~~v~~~~~~ 258 (340)
||+++++....
T Consensus 242 GF~~v~~~~~~ 252 (383)
T 4fsd_A 242 GFRDVRLVSVG 252 (383)
T ss_dssp TCCCEEEEEEE
T ss_pred CCceEEEEecc
Confidence 99988776543
No 34
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.83 E-value=1.4e-20 Score=174.63 Aligned_cols=202 Identities=22% Similarity=0.250 Sum_probs=139.2
Q ss_pred CcccccccccCccCcCCchhhhhhhhHHhhhhhhhhh----hhhcccCCCCchHHHHHHhccccCCCCCCCEEEEEcCcc
Q 019479 49 AKFFTPRCSLSSSRPASQPRFIQHKKEAFWFYRFLSI----VYDHVINPGHWTEDMRDEALEPADLFDRNMRVVDVGGGT 124 (340)
Q Consensus 49 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~ 124 (340)
+.....|.++.++++.+...+...+....+.|-...+ .|...+. .+.......++.......+..+|||||||+
T Consensus 135 ~~~~~~~~~L~~~~r~g~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~--~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~ 212 (364)
T 3p9c_A 135 KVLMESWYYLKDAVLDGGIPFNKAYGMSAFEYHGTDPRFNRVFNEGMK--NHSIIITKKLLELYHGFEGLGTLVDVGGGV 212 (364)
T ss_dssp HHHHGGGGGHHHHHHHCSCHHHHHHSSCHHHHHTTCHHHHHHHHHHHH--HHHHHHHHHHHHHCCTTTTCSEEEEETCTT
T ss_pred HHHHHHHhCHHHHHhhCCChHHHhcCCCHHHHHHhCHHHHHHHHHHHH--HhhHHHHHHHHHhcccccCCCEEEEeCCCC
Confidence 4456778888877765554444333322222211111 1211111 011223334444444235678999999999
Q ss_pred chHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCcccccCCHH--HHHHHHH
Q 019479 125 GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEYWPDPQ--RGIKEAY 202 (340)
Q Consensus 125 G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~d~~--~~l~~~~ 202 (340)
|.++..+++.+|+.+++++|+ +.+++.+++. ++++++.+|+.+ +++.+ |+|++..++|++++.+ .+|++++
T Consensus 213 G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---~~v~~~~~D~~~-~~p~~--D~v~~~~vlh~~~d~~~~~~L~~~~ 285 (364)
T 3p9c_A 213 GATVAAIAAHYPTIKGVNFDL-PHVISEAPQF---PGVTHVGGDMFK-EVPSG--DTILMKWILHDWSDQHCATLLKNCY 285 (364)
T ss_dssp SHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC---TTEEEEECCTTT-CCCCC--SEEEEESCGGGSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc---CCeEEEeCCcCC-CCCCC--CEEEehHHhccCCHHHHHHHHHHHH
Confidence 999999999999999999999 8888877642 689999999987 66654 9999999999997764 8899999
Q ss_pred HhcccCcEEEEEccCCCch------hHhhHhhhH-------hhcCCCHHHHHHHHHHCCCcEEEEEEeCC
Q 019479 203 RVLKIGGKACVIGPVYPTF------WLSRFFADV-------WMLFPKEEEYIEWFQKAGFKDVKLKRIGP 259 (340)
Q Consensus 203 ~~LkpgG~l~i~~~~~~~~------~~~~~~~~~-------~~~~~~~~~~~~~l~~aGF~~v~~~~~~~ 259 (340)
++|||||+|++.+...+.. .......+. ....++.++|.++++++||+++++.....
T Consensus 286 ~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~~~~ 355 (364)
T 3p9c_A 286 DALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVKSTYIYA 355 (364)
T ss_dssp HHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTCCEEEEEEEET
T ss_pred HHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCCceEEEEEcCC
Confidence 9999999999987654421 101011111 11357899999999999999999988753
No 35
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.83 E-value=1.2e-20 Score=175.51 Aligned_cols=201 Identities=21% Similarity=0.219 Sum_probs=139.1
Q ss_pred CcccccccccCccCcCCchhhhhhhhHHhhhhhhh----hhhhhcccCCCCchHHHHHHhccccCCCCCCCEEEEEcCcc
Q 019479 49 AKFFTPRCSLSSSRPASQPRFIQHKKEAFWFYRFL----SIVYDHVINPGHWTEDMRDEALEPADLFDRNMRVVDVGGGT 124 (340)
Q Consensus 49 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~ 124 (340)
+.....|..+.++++.+...+...++..++.|-.. ...|...+. .+.......++.......+..+|||||||+
T Consensus 137 ~~~~~~~~~l~~~~r~g~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~--~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~ 214 (368)
T 3reo_A 137 KVLLEPWFYLKDAILEGGIPFNKAYGMNIFDYHGTDHRINKVFNKGMS--SNSTITMKKILEMYNGFEGLTTIVDVGGGT 214 (368)
T ss_dssp HHHHGGGGGHHHHHHHCSCHHHHHSSSCHHHHHTTCHHHHHHHHHHHH--HHHHHHHHHHHTTCCTTTTCSEEEEETCTT
T ss_pred HHHHhhhhchHHHHhcCCCHHHHHhCCCHHHHHhhCHHHHHHHHHHHH--hhhhhHHHHHHHhcccccCCCEEEEeCCCc
Confidence 44566777777777655444443333222222111 111222111 112223344555554235678999999999
Q ss_pred chHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCcccccCCHH--HHHHHHH
Q 019479 125 GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEYWPDPQ--RGIKEAY 202 (340)
Q Consensus 125 G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~d~~--~~l~~~~ 202 (340)
|.++..+++.+|+.+++++|+ +.+++.+++. ++++++.+|+.+ +++.+ |+|++..++|++++.+ .+|++++
T Consensus 215 G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---~~v~~~~~d~~~-~~p~~--D~v~~~~vlh~~~~~~~~~~l~~~~ 287 (368)
T 3reo_A 215 GAVASMIVAKYPSINAINFDL-PHVIQDAPAF---SGVEHLGGDMFD-GVPKG--DAIFIKWICHDWSDEHCLKLLKNCY 287 (368)
T ss_dssp SHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC---TTEEEEECCTTT-CCCCC--SEEEEESCGGGBCHHHHHHHHHHHH
T ss_pred CHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc---CCCEEEecCCCC-CCCCC--CEEEEechhhcCCHHHHHHHHHHHH
Confidence 999999999999999999999 9888877643 689999999986 65544 9999999999998775 7899999
Q ss_pred HhcccCcEEEEEccCCCchh-------HhhHhh--hH----hhcCCCHHHHHHHHHHCCCcEEEEEEeC
Q 019479 203 RVLKIGGKACVIGPVYPTFW-------LSRFFA--DV----WMLFPKEEEYIEWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 203 ~~LkpgG~l~i~~~~~~~~~-------~~~~~~--~~----~~~~~~~~~~~~~l~~aGF~~v~~~~~~ 258 (340)
++|||||+|++.+...+... ...... .. ....++.++|.++|+++||+++++....
T Consensus 288 ~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~~~ 356 (368)
T 3reo_A 288 AALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVASCA 356 (368)
T ss_dssp HHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCEEEEEEEE
T ss_pred HHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCeeeEEEEeC
Confidence 99999999999886543211 001111 11 1235789999999999999999998875
No 36
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.83 E-value=1.1e-19 Score=162.58 Aligned_cols=142 Identities=20% Similarity=0.257 Sum_probs=117.7
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCccccc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEYW 191 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 191 (340)
.++.+|||||||+|.++..+++ ++.+|+|+|+|+.+++.++++. ++++++++|++++++ +++||+|++..+++|+
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~--~~~~~~~~d~~~~~~-~~~fD~v~~~~~l~~~ 130 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNY--PHLHFDVADARNFRV-DKPLDAVFSNAMLHWV 130 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHC--TTSCEEECCTTTCCC-SSCEEEEEEESCGGGC
T ss_pred CCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhC--CCCEEEECChhhCCc-CCCcCEEEEcchhhhC
Confidence 3678999999999999999998 5889999999999999999876 679999999998886 5789999999999999
Q ss_pred CCHHHHHHHHHHhcccCcEEEEEccCCCch-hHhhH----hhhH---------hhcCCCHHHHHHHHHHCCCcEEEEEEe
Q 019479 192 PDPQRGIKEAYRVLKIGGKACVIGPVYPTF-WLSRF----FADV---------WMLFPKEEEYIEWFQKAGFKDVKLKRI 257 (340)
Q Consensus 192 ~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~-~~~~~----~~~~---------~~~~~~~~~~~~~l~~aGF~~v~~~~~ 257 (340)
+|+..+++++.++|||||++++..+..... ..... .... ...+.+.+++.++|+++||+++++...
T Consensus 131 ~d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 210 (279)
T 3ccf_A 131 KEPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQGFDVTYAALF 210 (279)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHTEEEEEEEEE
T ss_pred cCHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHHcCCEEEEEEEe
Confidence 999999999999999999999987654321 11111 1111 012568999999999999999888766
Q ss_pred C
Q 019479 258 G 258 (340)
Q Consensus 258 ~ 258 (340)
.
T Consensus 211 ~ 211 (279)
T 3ccf_A 211 N 211 (279)
T ss_dssp E
T ss_pred c
Confidence 4
No 37
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.83 E-value=1.3e-20 Score=164.74 Aligned_cols=142 Identities=20% Similarity=0.102 Sum_probs=112.3
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC--CCcEEEEcCCCCCCCCCCCccEEEecC-ccc
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL--KECTIIEGDAEDLPFPTDYADRYVSAG-SIE 189 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~--~~i~~~~~d~~~~~~~~~~fD~v~~~~-~l~ 189 (340)
++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++... .+++++++|+.+++++ ++||+|++.. +++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~l~ 113 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNIN-RKFDLITCCLDSTN 113 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCS-CCEEEEEECTTGGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCcc-CCceEEEEcCcccc
Confidence 6789999999999999999988 67999999999999999977321 2789999999888766 7899999998 999
Q ss_pred cc---CCHHHHHHHHHHhcccCcEEEEEccCCCchh-------------------Hhh----------------------
Q 019479 190 YW---PDPQRGIKEAYRVLKIGGKACVIGPVYPTFW-------------------LSR---------------------- 225 (340)
Q Consensus 190 ~~---~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~-------------------~~~---------------------- 225 (340)
|+ .+...+++++.++|||||++++..+...... ...
T Consensus 114 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (246)
T 1y8c_A 114 YIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDDLVSMYISFFVRDGEFYKR 193 (246)
T ss_dssp GCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHTTTTTCCEEEEETTEEEEEEEEEETTEEEEEEEEEEECSSSEEE
T ss_pred ccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHHhhcCcceEEecCCcEEEEEecccCCceEEEEEEEEEecCCcccc
Confidence 99 4567899999999999999998643321000 000
Q ss_pred HhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEe
Q 019479 226 FFADVWMLFPKEEEYIEWFQKAGFKDVKLKRI 257 (340)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~ 257 (340)
........+++.+++.++|+++||+++++...
T Consensus 194 ~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~ 225 (246)
T 1y8c_A 194 FDEEHEERAYKEEDIEKYLKHGQLNILDKVDC 225 (246)
T ss_dssp EEEEEEEECCCHHHHHHHHHHTTEEEEEEEES
T ss_pred cEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcc
Confidence 00001124669999999999999999988654
No 38
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.83 E-value=1.1e-20 Score=167.54 Aligned_cols=138 Identities=18% Similarity=0.212 Sum_probs=110.8
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecC-ccccc
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAG-SIEYW 191 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~-~l~~~ 191 (340)
++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++.. +++++++|+.++++ +++||+|++.. +++|+
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~--~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~ 124 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADS--FGTVEGLELSADMLAIARRRNP--DAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHL 124 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTT--SSEEEEEESCHHHHHHHHHHCT--TSEEEECCTTTCCC-SCCEEEEEECTTGGGGS
T ss_pred CCCcEEEeCCcCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhCC--CCEEEECChHHCCc-cCCcCEEEEcCchhhhc
Confidence 5789999999999999999987 5799999999999999998864 79999999998876 77899999998 99999
Q ss_pred C---CHHHHHHHHHHhcccCcEEEEEccCCCchhHhh--------------------------------H----------
Q 019479 192 P---DPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSR--------------------------------F---------- 226 (340)
Q Consensus 192 ~---d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~--------------------------------~---------- 226 (340)
. +...+++++.++|||||++++.....+...... +
T Consensus 125 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (263)
T 3pfg_A 125 AGQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDRGIT 204 (263)
T ss_dssp CHHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEecCCCcEE
Confidence 6 445889999999999999999643222110000 0
Q ss_pred --hhhHhhcCCCHHHHHHHHHHCCCcEEEEE
Q 019479 227 --FADVWMLFPKEEEYIEWFQKAGFKDVKLK 255 (340)
Q Consensus 227 --~~~~~~~~~~~~~~~~~l~~aGF~~v~~~ 255 (340)
.......+++.+++.++|+++||+++++.
T Consensus 205 ~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~ 235 (263)
T 3pfg_A 205 HHEESHRITLFTREQYERAFTAAGLSVEFMP 235 (263)
T ss_dssp EEEEEEEEECCCHHHHHHHHHHTTEEEEEES
T ss_pred EEEEEEEEEeecHHHHHHHHHHCCCEEEEee
Confidence 00001235789999999999999988773
No 39
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.83 E-value=2.6e-20 Score=168.77 Aligned_cols=146 Identities=21% Similarity=0.217 Sum_probs=117.6
Q ss_pred CCCCEEEEEcCccchHHHHHH-HhCCCceEEEEeCCHHHHHHHHHhCCC----CCcEEEEcCCCCCCCCCCCccEEEecC
Q 019479 112 DRNMRVVDVGGGTGFTTLGIV-KHVDAKNVTILDQSPHQLAKAKQKEPL----KECTIIEGDAEDLPFPTDYADRYVSAG 186 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~-~~~~~~~v~g~D~s~~~~~~a~~~~~~----~~i~~~~~d~~~~~~~~~~fD~v~~~~ 186 (340)
.++.+|||||||+|.++..++ ...++.+|+|+|+|+.+++.++++... .+++++++|+.+++++ ++||+|+++.
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~ 195 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNG 195 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCS
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEECC
Confidence 478899999999999999986 456789999999999999999987442 3489999999998876 8899999999
Q ss_pred cccccCCHHH---HHHHHHHhcccCcEEEEEccCCCch------hHh-h-----------Hhhh----HhhcCCCHHHHH
Q 019479 187 SIEYWPDPQR---GIKEAYRVLKIGGKACVIGPVYPTF------WLS-R-----------FFAD----VWMLFPKEEEYI 241 (340)
Q Consensus 187 ~l~~~~d~~~---~l~~~~~~LkpgG~l~i~~~~~~~~------~~~-~-----------~~~~----~~~~~~~~~~~~ 241 (340)
+++|++++.. +++++.++|||||++++.+...+.. |.. . .+.. .+..+++.+++.
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTR 275 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHH
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHH
Confidence 9999998875 7999999999999999987543211 000 0 0011 111357899999
Q ss_pred HHHHHCCCcEEEEEEeC
Q 019479 242 EWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 242 ~~l~~aGF~~v~~~~~~ 258 (340)
++|+++||+++++....
T Consensus 276 ~~l~~aGF~~v~~~~~~ 292 (305)
T 3ocj_A 276 AQLEEAGFTDLRFEDDR 292 (305)
T ss_dssp HHHHHTTCEEEEEECCT
T ss_pred HHHHHCCCEEEEEEccc
Confidence 99999999999988743
No 40
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.83 E-value=1.9e-20 Score=168.61 Aligned_cols=144 Identities=15% Similarity=0.192 Sum_probs=107.2
Q ss_pred CCCCEEEEEcCccchHHHH----HHHhCCCceE--EEEeCCHHHHHHHHHhCC----CCCcEE--EEcCCCCCC------
Q 019479 112 DRNMRVVDVGGGTGFTTLG----IVKHVDAKNV--TILDQSPHQLAKAKQKEP----LKECTI--IEGDAEDLP------ 173 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~----l~~~~~~~~v--~g~D~s~~~~~~a~~~~~----~~~i~~--~~~d~~~~~------ 173 (340)
.++.+|||||||+|..+.. ++..+++..| +|+|+|+.|++.|+++.. .+++.+ ..+++++++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 4677999999999976553 3444466654 999999999999998732 235554 455554432
Q ss_pred CCCCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhH--------hhcCCCHHHHHHHHH
Q 019479 174 FPTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADV--------WMLFPKEEEYIEWFQ 245 (340)
Q Consensus 174 ~~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~ 245 (340)
+++++||+|++..++||++|+..+|++++++|||||++++........+.. ..... ...+.+.+++.++|+
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 209 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSSGWDK-LWKKYGSRFPQDDLCQYITSDDLTQMLD 209 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTTSHHHH-HHHHHGGGSCCCTTCCCCCHHHHHHHHH
T ss_pred cCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCCccHHH-HHHHHHHhccCCCcccCCCHHHHHHHHH
Confidence 457889999999999999999999999999999999999986554332221 11111 123678999999999
Q ss_pred HCCCcEEEEEE
Q 019479 246 KAGFKDVKLKR 256 (340)
Q Consensus 246 ~aGF~~v~~~~ 256 (340)
++||+++....
T Consensus 210 ~aGf~~~~~~~ 220 (292)
T 2aot_A 210 NLGLKYECYDL 220 (292)
T ss_dssp HHTCCEEEEEE
T ss_pred HCCCceEEEEe
Confidence 99999876433
No 41
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.83 E-value=9.1e-20 Score=156.02 Aligned_cols=127 Identities=24% Similarity=0.281 Sum_probs=108.0
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCc-eEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCccccc
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEYW 191 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 191 (340)
++.+|||+|||+|.++..+ +. +++|+|+|+.+++.++++. .+++++++|+.++++++++||+|++..+++|+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 108 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA--PEATWVRAWGEALPFPGESFDVVLLFTTLEFV 108 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC--TTSEEECCCTTSCCSCSSCEEEEEEESCTTTC
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC--CCcEEEEcccccCCCCCCcEEEEEEcChhhhc
Confidence 6789999999999998876 44 9999999999999999887 67899999999988888899999999999999
Q ss_pred CCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhh--------hHhhcCCCHHHHHHHHHHCC
Q 019479 192 PDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFA--------DVWMLFPKEEEYIEWFQKAG 248 (340)
Q Consensus 192 ~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~aG 248 (340)
+++..+++++.++|||||++++..+.....+...... .....+++.+++.++|+ |
T Consensus 109 ~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 109 EDVERVLLEARRVLRPGGALVVGVLEALSPWAALYRRLGEKGVLPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEECTTSHHHHHHHHHHHTTCTTGGGCCCCCHHHHHHHHC--S
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEecCCcCcHHHHHHHHhhccCccccccccCCHHHHHHHhc--C
Confidence 9999999999999999999999987765443322111 01234679999999999 7
No 42
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.83 E-value=1.4e-20 Score=160.48 Aligned_cols=139 Identities=10% Similarity=-0.006 Sum_probs=110.0
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC---------------CCCcEEEEcCCCCCCCCC
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---------------LKECTIIEGDAEDLPFPT 176 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~---------------~~~i~~~~~d~~~~~~~~ 176 (340)
.++.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.|+++.. ..+++++++|+.++++.+
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~ 98 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD 98 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred CCCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence 36789999999999999999998 7899999999999999998743 358999999999988665
Q ss_pred -CCccEEEecCcccccCCH--HHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEE
Q 019479 177 -DYADRYVSAGSIEYWPDP--QRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVK 253 (340)
Q Consensus 177 -~~fD~v~~~~~l~~~~d~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~ 253 (340)
++||+|++..+++++++. ..++++++++|||||++++......... .... ....+.+++.+++++ ||+++.
T Consensus 99 ~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~---~~~~--~~~~~~~el~~~~~~-gf~i~~ 172 (203)
T 1pjz_A 99 IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQAL---LEGP--PFSVPQTWLHRVMSG-NWEVTK 172 (203)
T ss_dssp HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSS---SSSC--CCCCCHHHHHHTSCS-SEEEEE
T ss_pred CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccc---cCCC--CCCCCHHHHHHHhcC-CcEEEE
Confidence 789999999999998644 4689999999999999544432221110 0000 112578999999998 999888
Q ss_pred EEEeC
Q 019479 254 LKRIG 258 (340)
Q Consensus 254 ~~~~~ 258 (340)
+....
T Consensus 173 ~~~~~ 177 (203)
T 1pjz_A 173 VGGQD 177 (203)
T ss_dssp EEESS
T ss_pred ecccc
Confidence 77764
No 43
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.83 E-value=2.5e-20 Score=173.34 Aligned_cols=152 Identities=20% Similarity=0.279 Sum_probs=121.2
Q ss_pred HHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC----CCCcEEEEcCCCCCCCCCC
Q 019479 102 DEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECTIIEGDAEDLPFPTD 177 (340)
Q Consensus 102 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~----~~~i~~~~~d~~~~~~~~~ 177 (340)
..++..... .++.+|||||||+|.++..+++.+|+.+++++|+ +.+++.++++.. .++++++.+|+. .+++.
T Consensus 192 ~~l~~~~~~-~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~- 267 (369)
T 3gwz_A 192 GQVAAAYDF-SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD- 267 (369)
T ss_dssp HHHHHHSCC-TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-
T ss_pred HHHHHhCCC-ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-
Confidence 344444443 4678999999999999999999999999999999 999999997632 367999999998 35555
Q ss_pred CccEEEecCcccccCCHH--HHHHHHHHhcccCcEEEEEccCCCchh--HhhHhh-----hHhhcCCCHHHHHHHHHHCC
Q 019479 178 YADRYVSAGSIEYWPDPQ--RGIKEAYRVLKIGGKACVIGPVYPTFW--LSRFFA-----DVWMLFPKEEEYIEWFQKAG 248 (340)
Q Consensus 178 ~fD~v~~~~~l~~~~d~~--~~l~~~~~~LkpgG~l~i~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~~~l~~aG 248 (340)
.||+|++.+++|++++.. .+|++++++|||||++++.+...+... ...... ......++.++|.++++++|
T Consensus 268 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aG 347 (369)
T 3gwz_A 268 GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSG 347 (369)
T ss_dssp SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTT
T ss_pred CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCC
Confidence 799999999999998886 799999999999999999876554311 111111 11123578999999999999
Q ss_pred CcEEEEEEe
Q 019479 249 FKDVKLKRI 257 (340)
Q Consensus 249 F~~v~~~~~ 257 (340)
|+++++...
T Consensus 348 f~~~~~~~~ 356 (369)
T 3gwz_A 348 LRVERSLPC 356 (369)
T ss_dssp EEEEEEEEC
T ss_pred CeEEEEEEC
Confidence 999999874
No 44
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.83 E-value=5.1e-20 Score=162.04 Aligned_cols=152 Identities=18% Similarity=0.158 Sum_probs=120.3
Q ss_pred HhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC-CCcEEEEcCCCCCCCCCCCccE
Q 019479 103 EALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-KECTIIEGDAEDLPFPTDYADR 181 (340)
Q Consensus 103 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~-~~i~~~~~d~~~~~~~~~~fD~ 181 (340)
.++..+.. .++.+|||||||+|.++..+++.. ..+|+++|+|+.+++.++++... .+++++++|+.++++++++||+
T Consensus 84 ~~l~~l~~-~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 161 (254)
T 1xtp_A 84 NFIASLPG-HGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDL 161 (254)
T ss_dssp HHHHTSTT-CCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEE
T ss_pred HHHHhhcc-cCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEE
Confidence 34444432 468899999999999999998874 56899999999999999988543 5799999999988888889999
Q ss_pred EEecCcccccC--CHHHHHHHHHHhcccCcEEEEEccCCCchh-HhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEeC
Q 019479 182 YVSAGSIEYWP--DPQRGIKEAYRVLKIGGKACVIGPVYPTFW-LSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 182 v~~~~~l~~~~--d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~ 258 (340)
|++..+++|++ +...+++++.++|||||++++.++...... ... .......++.+++.++|+++||+++++....
T Consensus 162 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 239 (254)
T 1xtp_A 162 IVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVD--KEDSSLTRSDIHYKRLFNESGVRVVKEAFQE 239 (254)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEE--TTTTEEEBCHHHHHHHHHHHTCCEEEEEECT
T ss_pred EEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceec--ccCCcccCCHHHHHHHHHHCCCEEEEeeecC
Confidence 99999999995 467999999999999999999875332110 000 0011124589999999999999999887764
No 45
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.82 E-value=8.1e-20 Score=157.47 Aligned_cols=135 Identities=27% Similarity=0.370 Sum_probs=113.0
Q ss_pred CCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCcccccCC
Q 019479 114 NMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEYWPD 193 (340)
Q Consensus 114 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~d 193 (340)
+.+|||||||+|.++..+++. +|+|+|+.+++.++++ +++++++|+.++++++++||+|++..+++|+++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~----~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~ 117 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR----GVFVLKGTAENLPLKDESFDFALMVTTICFVDD 117 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT----TCEEEECBTTBCCSCTTCEEEEEEESCGGGSSC
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc----CCEEEEcccccCCCCCCCeeEEEEcchHhhccC
Confidence 789999999999999887653 9999999999999976 789999999988888889999999999999999
Q ss_pred HHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhh-------HhhcCCCHHHHHHHHHHCCCcEEEEEEeC
Q 019479 194 PQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFAD-------VWMLFPKEEEYIEWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 194 ~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~aGF~~v~~~~~~ 258 (340)
+..+++++.++|||||++++..+.....+...+... ....+++.+++.++|+++||+++++....
T Consensus 118 ~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~ 189 (219)
T 1vlm_A 118 PERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQTL 189 (219)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEeccc
Confidence 999999999999999999998776543322211110 01235689999999999999999887763
No 46
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.82 E-value=7.1e-19 Score=157.76 Aligned_cols=155 Identities=23% Similarity=0.203 Sum_probs=122.2
Q ss_pred HHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC----CCCcEEEEcCCCCCCCCC
Q 019479 101 RDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECTIIEGDAEDLPFPT 176 (340)
Q Consensus 101 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~----~~~i~~~~~d~~~~~~~~ 176 (340)
...++..+.. .++.+|||||||+|.++..+++.+ +.+|+|+|+|+.+++.++++.. ..+++++.+|+.+++
T Consensus 53 ~~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--- 127 (287)
T 1kpg_A 53 IDLALGKLGL-QPGMTLLDVGCGWGATMMRAVEKY-DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD--- 127 (287)
T ss_dssp HHHHHTTTTC-CTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---
T ss_pred HHHHHHHcCC-CCcCEEEEECCcccHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---
Confidence 3444555544 478899999999999999999765 5699999999999999998732 257999999998765
Q ss_pred CCccEEEecCccccc--CCHHHHHHHHHHhcccCcEEEEEccCCCchhH---------------hhHhhhH---hhcCCC
Q 019479 177 DYADRYVSAGSIEYW--PDPQRGIKEAYRVLKIGGKACVIGPVYPTFWL---------------SRFFADV---WMLFPK 236 (340)
Q Consensus 177 ~~fD~v~~~~~l~~~--~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~---------------~~~~~~~---~~~~~~ 236 (340)
++||+|++..+++|+ .+...+++++.++|||||++++.++....... ..++... ...+++
T Consensus 128 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 207 (287)
T 1kpg_A 128 EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPS 207 (287)
T ss_dssp CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCC
T ss_pred CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCC
Confidence 789999999999999 67889999999999999999998765443211 0011111 112468
Q ss_pred HHHHHHHHHHCCCcEEEEEEeCCc
Q 019479 237 EEEYIEWFQKAGFKDVKLKRIGPK 260 (340)
Q Consensus 237 ~~~~~~~l~~aGF~~v~~~~~~~~ 260 (340)
.+++.++++++||+++++..+...
T Consensus 208 ~~~~~~~l~~aGf~~~~~~~~~~~ 231 (287)
T 1kpg_A 208 IPMVQECASANGFTVTRVQSLQPH 231 (287)
T ss_dssp HHHHHHHHHTTTCEEEEEEECHHH
T ss_pred HHHHHHHHHhCCcEEEEEEeCcHh
Confidence 999999999999999999887654
No 47
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.81 E-value=8.9e-20 Score=168.55 Aligned_cols=153 Identities=25% Similarity=0.348 Sum_probs=121.8
Q ss_pred HHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC---CCCcEEEEcCCCCCCCCCCC
Q 019479 102 DEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---LKECTIIEGDAEDLPFPTDY 178 (340)
Q Consensus 102 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~---~~~i~~~~~d~~~~~~~~~~ 178 (340)
..++..... ....+|||||||+|.++..+++++|+.+++..|+ |.+++.|+++.. .++++++.+|+.+.+. ..
T Consensus 169 ~~~~~~~~~-~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~--~~ 244 (353)
T 4a6d_A 169 RSVLTAFDL-SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPL--PE 244 (353)
T ss_dssp HHHHHSSCG-GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCC--CC
T ss_pred HHHHHhcCc-ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCC--CC
Confidence 344444443 4678999999999999999999999999999999 999999998743 3689999999976543 34
Q ss_pred ccEEEecCcccccCCHH--HHHHHHHHhcccCcEEEEEccCCCch----hHhhHhhh-Hh----hcCCCHHHHHHHHHHC
Q 019479 179 ADRYVSAGSIEYWPDPQ--RGIKEAYRVLKIGGKACVIGPVYPTF----WLSRFFAD-VW----MLFPKEEEYIEWFQKA 247 (340)
Q Consensus 179 fD~v~~~~~l~~~~d~~--~~l~~~~~~LkpgG~l~i~~~~~~~~----~~~~~~~~-~~----~~~~~~~~~~~~l~~a 247 (340)
+|+|++.+++|+++|.+ .+|++++++|+|||+++|.+...+.. .....+.- +. -..+|.++|.++|+++
T Consensus 245 ~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~A 324 (353)
T 4a6d_A 245 ADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSA 324 (353)
T ss_dssp CSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHH
T ss_pred ceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHC
Confidence 79999999999999885 78999999999999999998654421 22222111 11 1257999999999999
Q ss_pred CCcEEEEEEeC
Q 019479 248 GFKDVKLKRIG 258 (340)
Q Consensus 248 GF~~v~~~~~~ 258 (340)
||+++++...+
T Consensus 325 Gf~~v~v~~~~ 335 (353)
T 4a6d_A 325 GFRDFQFKKTG 335 (353)
T ss_dssp TCEEEEEECCS
T ss_pred CCceEEEEEcC
Confidence 99999988765
No 48
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.81 E-value=6.7e-20 Score=158.15 Aligned_cols=139 Identities=15% Similarity=0.151 Sum_probs=111.9
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCC---CCCC-CCccEEEecCcc
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDL---PFPT-DYADRYVSAGSI 188 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~---~~~~-~~fD~v~~~~~l 188 (340)
++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++ .++.+..+|+.++ ++.. .+||+|++..++
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~---~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l 126 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAA---GAGEVHLASYAQLAEAKVPVGKDYDLICANFAL 126 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHT---CSSCEEECCHHHHHTTCSCCCCCEEEEEEESCC
T ss_pred CCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHh---cccccchhhHHhhcccccccCCCccEEEECchh
Confidence 5689999999999999999988 77999999999999999987 5678888888665 4444 459999999999
Q ss_pred cccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhH--------h-------hhHhhcCCCHHHHHHHHHHCCCcEEE
Q 019479 189 EYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRF--------F-------ADVWMLFPKEEEYIEWFQKAGFKDVK 253 (340)
Q Consensus 189 ~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~--------~-------~~~~~~~~~~~~~~~~l~~aGF~~v~ 253 (340)
+ ..++..+++++.++|||||++++.++.........+ + ......+++.+++.++|+++||++++
T Consensus 127 ~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 205 (227)
T 3e8s_A 127 L-HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVS 205 (227)
T ss_dssp C-SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEE
T ss_pred h-hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEE
Confidence 9 889999999999999999999998765432211100 0 01111245899999999999999998
Q ss_pred EEEe
Q 019479 254 LKRI 257 (340)
Q Consensus 254 ~~~~ 257 (340)
+...
T Consensus 206 ~~~~ 209 (227)
T 3e8s_A 206 LQEP 209 (227)
T ss_dssp EECC
T ss_pred EecC
Confidence 8773
No 49
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.81 E-value=7.4e-20 Score=151.18 Aligned_cols=136 Identities=22% Similarity=0.282 Sum_probs=115.1
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCccccc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEYW 191 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 191 (340)
.++.+|||+|||+|.++..+++.. .+|+|+|+++.+++.++++ .+++++..+| .++++++||+|++..+++|+
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~--~~~v~~~~~d---~~~~~~~~D~v~~~~~l~~~ 88 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFA--TKLYCIDINVIALKEVKEK--FDSVITLSDP---KEIPDNSVDFILFANSFHDM 88 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTE--EEEEEECSCHHHHHHHHHH--CTTSEEESSG---GGSCTTCEEEEEEESCSTTC
T ss_pred CCCCeEEEECCCCCHHHHHHHhhc--CeEEEEeCCHHHHHHHHHh--CCCcEEEeCC---CCCCCCceEEEEEccchhcc
Confidence 367899999999999999999984 4999999999999999988 4689999999 56678899999999999999
Q ss_pred CCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEeCCc
Q 019479 192 PDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRIGPK 260 (340)
Q Consensus 192 ~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~~ 260 (340)
+++..+++++.++|||||++++.+......... ......++.+++.++++ ||++++.....+.
T Consensus 89 ~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~--Gf~~~~~~~~~~~ 151 (170)
T 3i9f_A 89 DDKQHVISEVKRILKDDGRVIIIDWRKENTGIG----PPLSIRMDEKDYMGWFS--NFVVEKRFNPTPY 151 (170)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSS----SCGGGCCCHHHHHHHTT--TEEEEEEECSSTT
T ss_pred cCHHHHHHHHHHhcCCCCEEEEEEcCccccccC----chHhhhcCHHHHHHHHh--CcEEEEccCCCCc
Confidence 999999999999999999999987654422111 11223568999999999 9999999888643
No 50
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.81 E-value=9.3e-20 Score=164.13 Aligned_cols=145 Identities=18% Similarity=0.249 Sum_probs=112.8
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC---------------------------------
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL--------------------------------- 159 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~--------------------------------- 159 (340)
++.+|||||||+|.++..+++.+++.+|+|+|+|+.+++.|+++...
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 67899999999999999999999889999999999999999987431
Q ss_pred ----------------------------CCcEEEEcCCCCCC-----CCCCCccEEEecCcccccC------CHHHHHHH
Q 019479 160 ----------------------------KECTIIEGDAEDLP-----FPTDYADRYVSAGSIEYWP------DPQRGIKE 200 (340)
Q Consensus 160 ----------------------------~~i~~~~~d~~~~~-----~~~~~fD~v~~~~~l~~~~------d~~~~l~~ 200 (340)
.+++|+++|+...+ +.+++||+|++..+++|+. +...++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 47999999997543 4678899999999997774 56689999
Q ss_pred HHHhcccCcEEEEEccCCCchhH-----hhHhhhHhhcCCCHHHHHHHHHH--CCCcEEEEEEe
Q 019479 201 AYRVLKIGGKACVIGPVYPTFWL-----SRFFADVWMLFPKEEEYIEWFQK--AGFKDVKLKRI 257 (340)
Q Consensus 201 ~~~~LkpgG~l~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~--aGF~~v~~~~~ 257 (340)
++++|||||+|++.......+.. .............++++.++|.+ +||+.+++...
T Consensus 206 ~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~~~ 269 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELVAT 269 (292)
T ss_dssp HHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC--
T ss_pred HHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEecc
Confidence 99999999999987543221111 11112222234468899999999 99998887665
No 51
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.81 E-value=2.2e-19 Score=156.31 Aligned_cols=139 Identities=19% Similarity=0.092 Sum_probs=115.0
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC----CCcEEEEcCCCCCCCCCCCccEEEecCcc
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL----KECTIIEGDAEDLPFPTDYADRYVSAGSI 188 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~----~~i~~~~~d~~~~~~~~~~fD~v~~~~~l 188 (340)
++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++... .+++++++|+.+++ ++++||+|++..++
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l 142 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP--ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFF 142 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT--TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESST
T ss_pred CCCCEEEeCCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhh
Confidence 3459999999999999998774 78999999999999999988543 46999999998876 45689999999999
Q ss_pred cccC--CHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEeCCc
Q 019479 189 EYWP--DPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRIGPK 260 (340)
Q Consensus 189 ~~~~--d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~~ 260 (340)
++++ +...+++++.++|||||++++........... .....+.+++.++|+++||+++++......
T Consensus 143 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~ 210 (235)
T 3lcc_A 143 CAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGG------PPYKVDVSTFEEVLVPIGFKAVSVEENPHA 210 (235)
T ss_dssp TTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSC------SSCCCCHHHHHHHHGGGTEEEEEEEECTTC
T ss_pred hcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCC------CCccCCHHHHHHHHHHcCCeEEEEEecCCc
Confidence 9998 77899999999999999999876544321100 111358999999999999999999887643
No 52
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.81 E-value=1.8e-19 Score=154.98 Aligned_cols=140 Identities=12% Similarity=0.012 Sum_probs=108.3
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC--------CCcEEEEcCCCCCCCCCCCccEEEe
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL--------KECTIIEGDAEDLPFPTDYADRYVS 184 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~--------~~i~~~~~d~~~~~~~~~~fD~v~~ 184 (340)
++.+|||||||+|.++..+++..+..+|+|+|+|+.+++.++++... .+++++++|+...+...++||+|++
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 108 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAATV 108 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEee
Confidence 67899999999999999999987668999999999999999987431 2799999999877777789999999
Q ss_pred cCcccccCCH--HHHHHHHHHhcccCcEEEEEccCCCchhH-----hhHhhhHhhcCCCHHHHH----HHHHHCCCcEE
Q 019479 185 AGSIEYWPDP--QRGIKEAYRVLKIGGKACVIGPVYPTFWL-----SRFFADVWMLFPKEEEYI----EWFQKAGFKDV 252 (340)
Q Consensus 185 ~~~l~~~~d~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~----~~l~~aGF~~v 252 (340)
..+++|++++ ..+++++.++|||||.+++.......... .......+....+.+++. ++++++||+++
T Consensus 109 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v~ 187 (217)
T 3jwh_A 109 IEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERFAYNVQ 187 (217)
T ss_dssp ESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCBCHHHHHHHHHHHHHHSSEEEE
T ss_pred HHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccccccccCHHHHHHHHHHHHHHcCceEE
Confidence 9999999866 79999999999999977665431100000 001111122245888888 88999999864
No 53
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.81 E-value=1.2e-19 Score=168.35 Aligned_cols=143 Identities=16% Similarity=0.212 Sum_probs=115.7
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC----CCcEEEEcCCCCC--CCCCCCccEEEecC
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL----KECTIIEGDAEDL--PFPTDYADRYVSAG 186 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~----~~i~~~~~d~~~~--~~~~~~fD~v~~~~ 186 (340)
...+|||||||+|.++..+++.+|+.+++++|+ +.+++.|+++... ++++++.+|+.+. |++ ++||+|++..
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~~ 256 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMSQ 256 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEES
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEec
Confidence 568999999999999999999999999999999 9999999987432 4799999999875 455 6799999999
Q ss_pred cccccCCHH--HHHHHHHHhcccCcEEEEEccCCCchhHhh------Hh-hhH------hhcCCCHHHHHHHHHHCCCcE
Q 019479 187 SIEYWPDPQ--RGIKEAYRVLKIGGKACVIGPVYPTFWLSR------FF-ADV------WMLFPKEEEYIEWFQKAGFKD 251 (340)
Q Consensus 187 ~l~~~~d~~--~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~------~~-~~~------~~~~~~~~~~~~~l~~aGF~~ 251 (340)
++|++++.+ .+|++++++|||||+|++.+...+...... .. ..+ ....++.++|.++|+++||++
T Consensus 257 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~~ 336 (363)
T 3dp7_A 257 FLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGLEV 336 (363)
T ss_dssp CSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEEE
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCeE
Confidence 999998774 789999999999999999886554321110 00 000 112568999999999999999
Q ss_pred EEEEEe
Q 019479 252 VKLKRI 257 (340)
Q Consensus 252 v~~~~~ 257 (340)
+++...
T Consensus 337 v~~~~~ 342 (363)
T 3dp7_A 337 EEIQDN 342 (363)
T ss_dssp SCCCCC
T ss_pred EEEEeC
Confidence 887654
No 54
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.81 E-value=5.1e-19 Score=154.95 Aligned_cols=144 Identities=14% Similarity=-0.003 Sum_probs=114.9
Q ss_pred CCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCC-----CCccEEEec
Q 019479 111 FDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPT-----DYADRYVSA 185 (340)
Q Consensus 111 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~-----~~fD~v~~~ 185 (340)
..++.+|||||||+|.++..+++.. .+|+|+|+|+.+++.++++....+++++++|+.+++... ..||+|++.
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~ 131 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFF--PRVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMR 131 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHS--SCEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhC--CCEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEc
Confidence 3578899999999999999999984 499999999999999999887678999999998754322 248999999
Q ss_pred CcccccC--CHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhh-----------hHh-----hcCCCHHHHHHHHHHC
Q 019479 186 GSIEYWP--DPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFA-----------DVW-----MLFPKEEEYIEWFQKA 247 (340)
Q Consensus 186 ~~l~~~~--d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~-----------~~~-----~~~~~~~~~~~~l~~a 247 (340)
.++||++ +...+++++.++|||||++++.+............. ... ....+.+++.+++ +
T Consensus 132 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--a 209 (245)
T 3ggd_A 132 TGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCIDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIELYF--P 209 (245)
T ss_dssp SSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHHHHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHHHC--T
T ss_pred chhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccccHHHHHHHhCCCCCchhhhhccccCCCCCccCHHHHHHHh--C
Confidence 9999998 778999999999999999999887655322111000 000 1135889999999 9
Q ss_pred CCcEEEEEEeC
Q 019479 248 GFKDVKLKRIG 258 (340)
Q Consensus 248 GF~~v~~~~~~ 258 (340)
||++++...+.
T Consensus 210 Gf~~~~~~~~~ 220 (245)
T 3ggd_A 210 DFEILSQGEGL 220 (245)
T ss_dssp TEEEEEEECCB
T ss_pred CCEEEeccccc
Confidence 99998877664
No 55
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.81 E-value=7.1e-19 Score=160.19 Aligned_cols=156 Identities=24% Similarity=0.275 Sum_probs=123.4
Q ss_pred HHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC----CCCcEEEEcCCCCCCCC
Q 019479 100 MRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECTIIEGDAEDLPFP 175 (340)
Q Consensus 100 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~----~~~i~~~~~d~~~~~~~ 175 (340)
....++..+.. .++.+|||||||+|.++..+++.+ +.+|+|+|+|+.+++.++++.. .++++++.+|+.+++
T Consensus 78 ~~~~~~~~~~~-~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-- 153 (318)
T 2fk8_A 78 KVDLNLDKLDL-KPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA-- 153 (318)
T ss_dssp HHHHHHTTSCC-CTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC--
T ss_pred HHHHHHHhcCC-CCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC--
Confidence 33445555544 478899999999999999999886 6799999999999999998732 246999999998764
Q ss_pred CCCccEEEecCccccc--CCHHHHHHHHHHhcccCcEEEEEccCCCchhHh---------------hHhhhH---hhcCC
Q 019479 176 TDYADRYVSAGSIEYW--PDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLS---------------RFFADV---WMLFP 235 (340)
Q Consensus 176 ~~~fD~v~~~~~l~~~--~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~---------------~~~~~~---~~~~~ 235 (340)
++||+|++..+++|+ ++...+++++.++|||||++++.++........ .++... ...+.
T Consensus 154 -~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (318)
T 2fk8_A 154 -EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLP 232 (318)
T ss_dssp -CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCC
T ss_pred -CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCC
Confidence 779999999999999 677899999999999999999988765542211 111111 12356
Q ss_pred CHHHHHHHHHHCCCcEEEEEEeCCc
Q 019479 236 KEEEYIEWFQKAGFKDVKLKRIGPK 260 (340)
Q Consensus 236 ~~~~~~~~l~~aGF~~v~~~~~~~~ 260 (340)
+.+++.++++++||+++++..++..
T Consensus 233 s~~~~~~~l~~aGf~~~~~~~~~~~ 257 (318)
T 2fk8_A 233 STEMMVEHGEKAGFTVPEPLSLRPH 257 (318)
T ss_dssp CHHHHHHHHHHTTCBCCCCEECHHH
T ss_pred CHHHHHHHHHhCCCEEEEEEecchh
Confidence 8999999999999999998887643
No 56
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.80 E-value=1.3e-19 Score=159.87 Aligned_cols=128 Identities=21% Similarity=0.261 Sum_probs=97.3
Q ss_pred hhhhhhhhhcccCCCCchHHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC
Q 019479 80 YRFLSIVYDHVINPGHWTEDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL 159 (340)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~ 159 (340)
|+..++.|+.. .+. +...+.+.+..... .+.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|++ .
T Consensus 11 F~~~a~~Y~~~-Rp~-yp~~l~~~l~~~~~---~~~~vLDvGcGtG~~~~~l~~~--~~~v~gvD~s~~ml~~a~~---~ 80 (257)
T 4hg2_A 11 FTPVADAYRAF-RPR-YPRALFRWLGEVAP---ARGDALDCGCGSGQASLGLAEF--FERVHAVDPGEAQIRQALR---H 80 (257)
T ss_dssp ---------CC-CCC-CCHHHHHHHHHHSS---CSSEEEEESCTTTTTHHHHHTT--CSEEEEEESCHHHHHTCCC---C
T ss_pred HHHHHHHHHHH-CCC-cHHHHHHHHHHhcC---CCCCEEEEcCCCCHHHHHHHHh--CCEEEEEeCcHHhhhhhhh---c
Confidence 34445555542 222 22334444444332 4679999999999999999987 6799999999999988864 3
Q ss_pred CCcEEEEcCCCCCCCCCCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCC
Q 019479 160 KECTIIEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVY 218 (340)
Q Consensus 160 ~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~ 218 (340)
++++++++|++++++++++||+|++..++|++ ++..+++++.|+|||||+|++.....
T Consensus 81 ~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~ 138 (257)
T 4hg2_A 81 PRVTYAVAPAEDTGLPPASVDVAIAAQAMHWF-DLDRFWAELRRVARPGAVFAAVTYGL 138 (257)
T ss_dssp TTEEEEECCTTCCCCCSSCEEEEEECSCCTTC-CHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred CCceeehhhhhhhcccCCcccEEEEeeehhHh-hHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 78999999999999999999999999999877 68899999999999999998886543
No 57
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.80 E-value=2.7e-19 Score=154.00 Aligned_cols=145 Identities=17% Similarity=0.099 Sum_probs=110.5
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC--------CCcEEEEcCCCCCCCCCCCccEEEe
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL--------KECTIIEGDAEDLPFPTDYADRYVS 184 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~--------~~i~~~~~d~~~~~~~~~~fD~v~~ 184 (340)
++.+|||||||+|.++..+++..+..+|+|+|+|+.+++.++++... .+++++++|+...+..+++||+|++
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~ 108 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAATV 108 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEEE
Confidence 67899999999999999999987668999999999999999987432 2799999999887777789999999
Q ss_pred cCcccccCCH--HHHHHHHHHhcccCcEEEEEccCCCch-----hHhhHhhhHhhcCCCHHHHH----HHHHHCCCcEEE
Q 019479 185 AGSIEYWPDP--QRGIKEAYRVLKIGGKACVIGPVYPTF-----WLSRFFADVWMLFPKEEEYI----EWFQKAGFKDVK 253 (340)
Q Consensus 185 ~~~l~~~~d~--~~~l~~~~~~LkpgG~l~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~----~~l~~aGF~~v~ 253 (340)
..+++|++++ ..+++++.++|||||.++......... .........+....+.+++. ++++++||++.
T Consensus 109 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v~- 187 (219)
T 3jwg_A 109 IEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSVR- 187 (219)
T ss_dssp ESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEEE-
T ss_pred HHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcEEE-
Confidence 9999999866 689999999999999665553221100 00011111122245888888 78999999754
Q ss_pred EEEeC
Q 019479 254 LKRIG 258 (340)
Q Consensus 254 ~~~~~ 258 (340)
...++
T Consensus 188 ~~~~g 192 (219)
T 3jwg_A 188 FLQIG 192 (219)
T ss_dssp EEEES
T ss_pred EEecC
Confidence 44443
No 58
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.80 E-value=6.3e-19 Score=161.67 Aligned_cols=153 Identities=20% Similarity=0.249 Sum_probs=121.1
Q ss_pred HHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC----CCCcEEEEcCCCCCCCCC
Q 019479 101 RDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECTIIEGDAEDLPFPT 176 (340)
Q Consensus 101 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~----~~~i~~~~~d~~~~~~~~ 176 (340)
...++..... .+ .+|||||||+|.++..+++.+|+.+++++|+ +.+++.++++.. .++++++.+|+.+ +++
T Consensus 157 ~~~~~~~~~~-~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~- 231 (334)
T 2ip2_A 157 FHEIPRLLDF-RG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP- 231 (334)
T ss_dssp HHHHHHHSCC-TT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-
T ss_pred HHHHHHhCCC-CC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-
Confidence 3444444444 34 8999999999999999999999999999999 999999998743 2579999999977 544
Q ss_pred CCccEEEecCcccccCCHH--HHHHHHHHhcccCcEEEEEccCCCc---hhHhhHhhh-----HhhcCCCHHHHHHHHHH
Q 019479 177 DYADRYVSAGSIEYWPDPQ--RGIKEAYRVLKIGGKACVIGPVYPT---FWLSRFFAD-----VWMLFPKEEEYIEWFQK 246 (340)
Q Consensus 177 ~~fD~v~~~~~l~~~~d~~--~~l~~~~~~LkpgG~l~i~~~~~~~---~~~~~~~~~-----~~~~~~~~~~~~~~l~~ 246 (340)
++||+|++..++|++++.. .++++++++|||||++++.+...+. ......+.. .....++.++|.+++++
T Consensus 232 ~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~ 311 (334)
T 2ip2_A 232 SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGR 311 (334)
T ss_dssp SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHH
T ss_pred CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHH
Confidence 5799999999999998876 8999999999999999999765432 111111110 11235689999999999
Q ss_pred CCCcEEEEEEeC
Q 019479 247 AGFKDVKLKRIG 258 (340)
Q Consensus 247 aGF~~v~~~~~~ 258 (340)
+||+++++....
T Consensus 312 aGf~~~~~~~~~ 323 (334)
T 2ip2_A 312 GGFAVERIVDLP 323 (334)
T ss_dssp TTEEEEEEEEET
T ss_pred CCCceeEEEECC
Confidence 999999988764
No 59
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.80 E-value=1.3e-19 Score=167.21 Aligned_cols=147 Identities=23% Similarity=0.268 Sum_probs=112.9
Q ss_pred hccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC----CCCcEEEEcCCCCCCCCCCCc
Q 019479 104 ALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECTIIEGDAEDLPFPTDYA 179 (340)
Q Consensus 104 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~----~~~i~~~~~d~~~~~~~~~~f 179 (340)
++..... .++.+|||||||+|.++..+++.+|+.+++++|+ +.++. +++.. .++++++.+|+. .+++ +|
T Consensus 176 ~~~~~~~-~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~-~~~p--~~ 248 (348)
T 3lst_A 176 LARAGDF-PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFL-REVP--HA 248 (348)
T ss_dssp HHHHSCC-CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTT-TCCC--CC
T ss_pred HHHhCCc-cCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCC-CCCC--CC
Confidence 3444443 4678999999999999999999999999999999 55555 32221 257999999996 3444 79
Q ss_pred cEEEecCcccccCCH--HHHHHHHHHhcccCcEEEEEccCCCch---hHhhHhh-----hHhhcCCCHHHHHHHHHHCCC
Q 019479 180 DRYVSAGSIEYWPDP--QRGIKEAYRVLKIGGKACVIGPVYPTF---WLSRFFA-----DVWMLFPKEEEYIEWFQKAGF 249 (340)
Q Consensus 180 D~v~~~~~l~~~~d~--~~~l~~~~~~LkpgG~l~i~~~~~~~~---~~~~~~~-----~~~~~~~~~~~~~~~l~~aGF 249 (340)
|+|++..++|+++|. ..+|++++++|||||+|++.+...+.. ....... ......++.++|.++++++||
T Consensus 249 D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf 328 (348)
T 3lst_A 249 DVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGL 328 (348)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTE
T ss_pred cEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCC
Confidence 999999999999988 599999999999999999987654421 1111111 111225789999999999999
Q ss_pred cEEEEEEe
Q 019479 250 KDVKLKRI 257 (340)
Q Consensus 250 ~~v~~~~~ 257 (340)
+++++...
T Consensus 329 ~~~~~~~~ 336 (348)
T 3lst_A 329 RLDRVVGT 336 (348)
T ss_dssp EEEEEEEC
T ss_pred ceEEEEEC
Confidence 99998873
No 60
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.80 E-value=9.9e-20 Score=158.62 Aligned_cols=102 Identities=22% Similarity=0.242 Sum_probs=88.5
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEe-cCcccc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVS-AGSIEY 190 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~-~~~l~~ 190 (340)
.++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.++++. ++++++++|+.++++ +++||+|++ ..+++|
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~s~~~~~~a~~~~--~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~ 113 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF--GDTAGLELSEDMLTHARKRL--PDATLHQGDMRDFRL-GRKFSAVVSMFSSVGY 113 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH--SEEEEEESCHHHHHHHHHHC--TTCEEEECCTTTCCC-SSCEEEEEECTTGGGG
T ss_pred CCCCeEEEecccCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhC--CCCEEEECCHHHccc-CCCCcEEEEcCchHhh
Confidence 367899999999999999999984 49999999999999999875 568999999988876 678999995 559999
Q ss_pred cCC---HHHHHHHHHHhcccCcEEEEEccCC
Q 019479 191 WPD---PQRGIKEAYRVLKIGGKACVIGPVY 218 (340)
Q Consensus 191 ~~d---~~~~l~~~~~~LkpgG~l~i~~~~~ 218 (340)
+.+ ...+++++.++|||||++++.+...
T Consensus 114 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 114 LKTTEELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp CCSHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred cCCHHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 954 3589999999999999999986543
No 61
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.80 E-value=1.7e-18 Score=149.56 Aligned_cols=141 Identities=22% Similarity=0.290 Sum_probs=116.3
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCC--CCCCCCCccEEEecCccc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAED--LPFPTDYADRYVSAGSIE 189 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~--~~~~~~~fD~v~~~~~l~ 189 (340)
.++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++. .+++.+|+.+ .++++++||+|++..+++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~~~~~~~~~~~~~----~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~ 104 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN--GTRVSGIEAFPEAAEQAKEKL----DHVVLGDIETMDMPYEEEQFDCVIFGDVLE 104 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT--TCEEEEEESSHHHHHHHHTTS----SEEEESCTTTCCCCSCTTCEEEEEEESCGG
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhC----CcEEEcchhhcCCCCCCCccCEEEECChhh
Confidence 46789999999999999999988 589999999999999999654 3788999976 566778999999999999
Q ss_pred ccCCHHHHHHHHHHhcccCcEEEEEccCCCchhH-hhHhhh------------HhhcCCCHHHHHHHHHHCCCcEEEEEE
Q 019479 190 YWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWL-SRFFAD------------VWMLFPKEEEYIEWFQKAGFKDVKLKR 256 (340)
Q Consensus 190 ~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~-~~~~~~------------~~~~~~~~~~~~~~l~~aGF~~v~~~~ 256 (340)
|++++..+++++.++|||||++++..+....... ...... ....+++.+++.++++++||+++++..
T Consensus 105 ~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 184 (230)
T 3cc8_A 105 HLFDPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSISKVDR 184 (230)
T ss_dssp GSSCHHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEEEEEe
Confidence 9999999999999999999999998766543211 111111 112356899999999999999999888
Q ss_pred eC
Q 019479 257 IG 258 (340)
Q Consensus 257 ~~ 258 (340)
+.
T Consensus 185 ~~ 186 (230)
T 3cc8_A 185 VY 186 (230)
T ss_dssp EE
T ss_pred cc
Confidence 75
No 62
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.80 E-value=4.5e-20 Score=171.82 Aligned_cols=149 Identities=20% Similarity=0.249 Sum_probs=117.2
Q ss_pred HHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccE
Q 019479 102 DEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADR 181 (340)
Q Consensus 102 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 181 (340)
..++.......++.+|||||||+|.++..+++++|..+++++|+ +.+++.+++. ++++++.+|+.+ +++. ||+
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~---~~v~~~~~d~~~-~~~~--~D~ 270 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL---SGIEHVGGDMFA-SVPQ--GDA 270 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC---TTEEEEECCTTT-CCCC--EEE
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc---CCCEEEeCCccc-CCCC--CCE
Confidence 34444443234678999999999999999999999999999999 9999887642 679999999977 5554 999
Q ss_pred EEecCcccccCCHH--HHHHHHHHhcccCcEEEEEccCCCchh-------HhhHhhh-----HhhcCCCHHHHHHHHHHC
Q 019479 182 YVSAGSIEYWPDPQ--RGIKEAYRVLKIGGKACVIGPVYPTFW-------LSRFFAD-----VWMLFPKEEEYIEWFQKA 247 (340)
Q Consensus 182 v~~~~~l~~~~d~~--~~l~~~~~~LkpgG~l~i~~~~~~~~~-------~~~~~~~-----~~~~~~~~~~~~~~l~~a 247 (340)
|++..++||++|.. .+|++++++|||||++++.+...+... ....... .....++.++|.++++++
T Consensus 271 v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~a 350 (372)
T 1fp1_D 271 MILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLS 350 (372)
T ss_dssp EEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHT
T ss_pred EEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHC
Confidence 99999999999887 999999999999999999865432110 1111111 112356899999999999
Q ss_pred CCcEEEEEEe
Q 019479 248 GFKDVKLKRI 257 (340)
Q Consensus 248 GF~~v~~~~~ 257 (340)
||+++++...
T Consensus 351 Gf~~~~~~~~ 360 (372)
T 1fp1_D 351 GFSKFQVACR 360 (372)
T ss_dssp TCSEEEEEEE
T ss_pred CCceEEEEEc
Confidence 9999998875
No 63
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.80 E-value=3.5e-19 Score=151.28 Aligned_cols=152 Identities=20% Similarity=0.128 Sum_probs=115.7
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC--CCCcEEEEcCCCCCCCCCCCccEEEecCcccc
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP--LKECTIIEGDAEDLPFPTDYADRYVSAGSIEY 190 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~--~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 190 (340)
++ +|||||||+|.++..+++. +.+|+|+|+|+.+++.++++.. ..+++++++|+.++++++++||+|++.....+
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 106 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIFCHLP 106 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEECCCCC
T ss_pred CC-CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEhhcCC
Confidence 45 9999999999999999887 6799999999999999997742 13789999999888877889999999643222
Q ss_pred cCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEeCCcccccccccc
Q 019479 191 WPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRIGPKWYRGVRRHG 269 (340)
Q Consensus 191 ~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~~~~~~~~~~~ 269 (340)
..+...+++++.++|||||++++..+.................+++.+++.++++ ||+++++.........+....+
T Consensus 107 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~~~~~~~~~~g~~~~~ 183 (202)
T 2kw5_A 107 SSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLIANNLERNLDEGAYHQG 183 (202)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEEEEEEEEECSCSSSSCC
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEEEEEEEeecCCCCCccc
Confidence 2456789999999999999999987665433211000111223679999999999 9999999887655444443333
No 64
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.80 E-value=1.8e-19 Score=167.85 Aligned_cols=145 Identities=21% Similarity=0.270 Sum_probs=115.3
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---C-CCCcEEEEcCCCCCCCCCCCccEEEecCc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---P-LKECTIIEGDAEDLPFPTDYADRYVSAGS 187 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~-~~~i~~~~~d~~~~~~~~~~fD~v~~~~~ 187 (340)
.++.+|||||||+|.++..+++.+|+.+++++|+ +.+++.++++. . ..+++++.+|+.+ +++. .||+|++..+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~v 257 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPV-TADVVLLSFV 257 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSC-CEEEEEEESC
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCC-CCCEEEEecc
Confidence 4678999999999999999999998899999999 99999999763 2 2479999999975 3443 3999999999
Q ss_pred ccccCCHH--HHHHHHHHhcccCcEEEEEcc--CCCch---hHhhHhhhH-----hhcCCCHHHHHHHHHHCCCcEEEEE
Q 019479 188 IEYWPDPQ--RGIKEAYRVLKIGGKACVIGP--VYPTF---WLSRFFADV-----WMLFPKEEEYIEWFQKAGFKDVKLK 255 (340)
Q Consensus 188 l~~~~d~~--~~l~~~~~~LkpgG~l~i~~~--~~~~~---~~~~~~~~~-----~~~~~~~~~~~~~l~~aGF~~v~~~ 255 (340)
+|++++.. .+++++.++|||||++++.+. ..+.. ......... ....++.++|.++++++||+++++.
T Consensus 258 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~ 337 (374)
T 1qzz_A 258 LLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASER 337 (374)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEEEE
Confidence 99998875 899999999999999999887 43321 111111111 1235799999999999999999998
Q ss_pred EeCC
Q 019479 256 RIGP 259 (340)
Q Consensus 256 ~~~~ 259 (340)
....
T Consensus 338 ~~~~ 341 (374)
T 1qzz_A 338 TSGS 341 (374)
T ss_dssp EECC
T ss_pred ECCC
Confidence 8753
No 65
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.80 E-value=6.9e-19 Score=154.85 Aligned_cols=139 Identities=13% Similarity=0.026 Sum_probs=110.0
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC--------------------CCCcEEEEcCCCC
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP--------------------LKECTIIEGDAED 171 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~--------------------~~~i~~~~~d~~~ 171 (340)
.++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.|+++.. ..+++++++|+.+
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 36789999999999999999998 7899999999999999987643 2579999999998
Q ss_pred CCCCC-CCccEEEecCcccccCCH--HHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCC
Q 019479 172 LPFPT-DYADRYVSAGSIEYWPDP--QRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAG 248 (340)
Q Consensus 172 ~~~~~-~~fD~v~~~~~l~~~~d~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 248 (340)
++..+ ++||+|++..+++++++. ..+++++.++|||||+++++......... ... ....+.+++.++++. +
T Consensus 145 l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~---~g~--~~~~~~~el~~~l~~-~ 218 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKH---AGP--PFYVPSAELKRLFGT-K 218 (252)
T ss_dssp GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSC---CCS--SCCCCHHHHHHHHTT-T
T ss_pred CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccC---CCC--CCCCCHHHHHHHhhC-C
Confidence 87654 789999999999998643 57899999999999999755432211100 000 112588999999987 5
Q ss_pred CcEEEEEEeC
Q 019479 249 FKDVKLKRIG 258 (340)
Q Consensus 249 F~~v~~~~~~ 258 (340)
|+++......
T Consensus 219 f~v~~~~~~~ 228 (252)
T 2gb4_A 219 CSMQCLEEVD 228 (252)
T ss_dssp EEEEEEEEEE
T ss_pred eEEEEEeccc
Confidence 9988887654
No 66
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.79 E-value=1.6e-19 Score=163.13 Aligned_cols=154 Identities=16% Similarity=0.182 Sum_probs=116.8
Q ss_pred HHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC------CCcEEEEcCCCCCC
Q 019479 100 MRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL------KECTIIEGDAEDLP 173 (340)
Q Consensus 100 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~------~~i~~~~~d~~~~~ 173 (340)
....++..+.. ++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++... .+++++++|+.+++
T Consensus 71 ~~~~~~~~~~~--~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~ 146 (299)
T 3g2m_A 71 EAREFATRTGP--VSGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFA 146 (299)
T ss_dssp HHHHHHHHHCC--CCSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCC
T ss_pred HHHHHHHhhCC--CCCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCC
Confidence 33444444432 4459999999999999999988 68999999999999999987443 57999999999988
Q ss_pred CCCCCccEEEec-CcccccCC--HHHHHHHHHHhcccCcEEEEEccCCCchhHh------hH---------h--------
Q 019479 174 FPTDYADRYVSA-GSIEYWPD--PQRGIKEAYRVLKIGGKACVIGPVYPTFWLS------RF---------F-------- 227 (340)
Q Consensus 174 ~~~~~fD~v~~~-~~l~~~~d--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~------~~---------~-------- 227 (340)
+ +++||+|++. .+++++++ ...+++++.++|||||+|++..+........ .+ .
T Consensus 147 ~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 225 (299)
T 3g2m_A 147 L-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAE 225 (299)
T ss_dssp C-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCEEEEEEE
T ss_pred c-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEeccc
Confidence 6 6789999865 56666653 4689999999999999999986554321000 00 0
Q ss_pred -------------------hhHhhcCCCHHHHHHHHHHCCCcEEEEEEeC
Q 019479 228 -------------------ADVWMLFPKEEEYIEWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 228 -------------------~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~ 258 (340)
......+++.+++.++|+++||+++++..+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~ 275 (299)
T 3g2m_A 226 EIQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFA 275 (299)
T ss_dssp EEEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEEC
T ss_pred cEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecC
Confidence 0001124589999999999999999999886
No 67
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.79 E-value=2e-18 Score=159.39 Aligned_cols=151 Identities=18% Similarity=0.173 Sum_probs=117.8
Q ss_pred HhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC----CCCcEEEEcCCCCCC-CCCC
Q 019479 103 EALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECTIIEGDAEDLP-FPTD 177 (340)
Q Consensus 103 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~----~~~i~~~~~d~~~~~-~~~~ 177 (340)
.++......+.+.+|||||||+|.++..+++.+|+.+++++|+ +.+++.++++.. .++++++.+|+.+.+ +..+
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 247 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGG 247 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTC
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCC
Confidence 4455554433378999999999999999999999999999999 889999987622 246999999998754 1345
Q ss_pred CccEEEecCcccccCCH--HHHHHHHHHhcccCcEEEEEccCCCch----hHhhHhhh--H----hhcCCCHHHHHHHHH
Q 019479 178 YADRYVSAGSIEYWPDP--QRGIKEAYRVLKIGGKACVIGPVYPTF----WLSRFFAD--V----WMLFPKEEEYIEWFQ 245 (340)
Q Consensus 178 ~fD~v~~~~~l~~~~d~--~~~l~~~~~~LkpgG~l~i~~~~~~~~----~~~~~~~~--~----~~~~~~~~~~~~~l~ 245 (340)
.||+|++..++|++++. ..++++++++|||||++++.+...+.. ........ . ....++.++|.++++
T Consensus 248 ~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~ 327 (352)
T 3mcz_A 248 AADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVR 327 (352)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHH
T ss_pred CccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHH
Confidence 69999999999999876 689999999999999999987654321 11111110 0 123678999999999
Q ss_pred HCCCcEEEE
Q 019479 246 KAGFKDVKL 254 (340)
Q Consensus 246 ~aGF~~v~~ 254 (340)
++||++++.
T Consensus 328 ~aGf~~~~~ 336 (352)
T 3mcz_A 328 DAGLAVGER 336 (352)
T ss_dssp HTTCEEEEE
T ss_pred HCCCceeee
Confidence 999999884
No 68
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.79 E-value=7.5e-19 Score=153.41 Aligned_cols=171 Identities=26% Similarity=0.386 Sum_probs=122.0
Q ss_pred hhhhhhhhhhcccCCCCchHHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC
Q 019479 79 FYRFLSIVYDHVINPGHWTEDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP 158 (340)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~ 158 (340)
.|+..++.|+..+....+ ......+.... +++.+|||+|||+|.++..+++. .+|+|+|+|+.+++.|+++..
T Consensus 3 ~y~~~a~~yd~~~~~~~~-~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~ 75 (243)
T 3d2l_A 3 AYEQFAYVYDELMQDVPY-PEWVAWVLEQV---EPGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAM 75 (243)
T ss_dssp ---CTTHHHHHHTTTCCH-HHHHHHHHHHS---CTTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhhhcccH-HHHHHHHHHHc---CCCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhh
Confidence 456666777765544333 23344444433 35689999999999999998876 799999999999999998732
Q ss_pred --CCCcEEEEcCCCCCCCCCCCccEEEecC-cccccC---CHHHHHHHHHHhcccCcEEEEEccCCCch-----------
Q 019479 159 --LKECTIIEGDAEDLPFPTDYADRYVSAG-SIEYWP---DPQRGIKEAYRVLKIGGKACVIGPVYPTF----------- 221 (340)
Q Consensus 159 --~~~i~~~~~d~~~~~~~~~~fD~v~~~~-~l~~~~---d~~~~l~~~~~~LkpgG~l~i~~~~~~~~----------- 221 (340)
..+++++++|+.+++++ ++||+|++.. +++|+. +...+++++.++|||||++++..+.....
T Consensus 76 ~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~ 154 (243)
T 3d2l_A 76 ETNRHVDFWVQDMRELELP-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHSPYKMETLFNGKTYAT 154 (243)
T ss_dssp HTTCCCEEEECCGGGCCCS-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHHTTTSSEEEEE
T ss_pred hcCCceEEEEcChhhcCCC-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCHHHHHHhcCCcceeE
Confidence 25789999999887765 7899999986 999984 44588999999999999998853321100
Q ss_pred --------hHh-------------hHh----h--------hHhhcCCCHHHHHHHHHHCCCcEEEEEEe
Q 019479 222 --------WLS-------------RFF----A--------DVWMLFPKEEEYIEWFQKAGFKDVKLKRI 257 (340)
Q Consensus 222 --------~~~-------------~~~----~--------~~~~~~~~~~~~~~~l~~aGF~~v~~~~~ 257 (340)
|.. .++ . .....+++.+++.++|+++||+++++...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~ 223 (243)
T 3d2l_A 155 HAEQSSYIWFADPGEEPLSVVHELTFFIEGEDGRYDRVDETHHQRTYPPEQYITWLREAGFRVCAVTGD 223 (243)
T ss_dssp ECSSEEEEEEEEECSSTTEEEEEEEEEEECTTSCEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEET
T ss_pred ECCCcEEEEEeecCccccEEEEEEEEEEEcCCCceEEEEEEEeEecCCHHHHHHHHHHCCCeEEEEecC
Confidence 000 000 0 00123579999999999999999888653
No 69
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.79 E-value=7e-19 Score=156.70 Aligned_cols=154 Identities=12% Similarity=0.067 Sum_probs=117.7
Q ss_pred HhccccCCCCCCCEEEEEcCccchHHHHHHHhC-CCceEEEEeCCHH------HHHHHHHhCCC----CCcEEEEcC---
Q 019479 103 EALEPADLFDRNMRVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPH------QLAKAKQKEPL----KECTIIEGD--- 168 (340)
Q Consensus 103 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~------~~~~a~~~~~~----~~i~~~~~d--- 168 (340)
.++..+.. .++.+|||||||+|.++..+++.+ |..+|+|+|+|+. +++.++++... ++++++.+|
T Consensus 34 ~l~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 112 (275)
T 3bkx_A 34 AIAEAWQV-KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLS 112 (275)
T ss_dssp HHHHHHTC-CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTT
T ss_pred HHHHHcCC-CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhh
Confidence 33443333 478899999999999999999986 5589999999997 89999877422 579999998
Q ss_pred CCCCCCCCCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCCchh---Hhh----Hhhh-----------H
Q 019479 169 AEDLPFPTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFW---LSR----FFAD-----------V 230 (340)
Q Consensus 169 ~~~~~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~---~~~----~~~~-----------~ 230 (340)
...+++++++||+|++..+++|++++..+++.+.++++|||++++.+....... ... .... .
T Consensus 113 ~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (275)
T 3bkx_A 113 DDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSDVAN 192 (275)
T ss_dssp TCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCTTCS
T ss_pred hccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhcccccccc
Confidence 344566778999999999999999999877777778888999999875543211 000 1110 0
Q ss_pred hhcCCCHHHHHHHHHHCCCcEEEEEEe
Q 019479 231 WMLFPKEEEYIEWFQKAGFKDVKLKRI 257 (340)
Q Consensus 231 ~~~~~~~~~~~~~l~~aGF~~v~~~~~ 257 (340)
...+++.+++.++++++||+++++..+
T Consensus 193 ~~~~~s~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 193 IRTLITPDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp CCCCCCHHHHHHHHHHHTCEEEECCCB
T ss_pred ccccCCHHHHHHHHHHCCCeeEEEEEe
Confidence 113578999999999999999887766
No 70
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.78 E-value=4.8e-19 Score=156.71 Aligned_cols=147 Identities=14% Similarity=0.152 Sum_probs=114.5
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCC------------------------------
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKE------------------------------ 161 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~------------------------------ 161 (340)
.++.+|||||||+|.++..+++..+ .+|+|+|+|+.+++.++++....+
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 3678999999999999998887732 499999999999999988754332
Q ss_pred --c-EEEEcCCCCCC-CCC---CCccEEEecCccc----ccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhH
Q 019479 162 --C-TIIEGDAEDLP-FPT---DYADRYVSAGSIE----YWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADV 230 (340)
Q Consensus 162 --i-~~~~~d~~~~~-~~~---~~fD~v~~~~~l~----~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~ 230 (340)
+ .++++|+.+.. +++ ++||+|++..+++ ++++...+++++.++|||||++++.+.......... ....
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~-~~~~ 212 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIG-EQKF 212 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEET-TEEE
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcC-Cccc
Confidence 7 89999997753 345 7899999999999 666778999999999999999999875433211100 0011
Q ss_pred hhcCCCHHHHHHHHHHCCCcEEEEEEeCCc
Q 019479 231 WMLFPKEEEYIEWFQKAGFKDVKLKRIGPK 260 (340)
Q Consensus 231 ~~~~~~~~~~~~~l~~aGF~~v~~~~~~~~ 260 (340)
.....+.+++.++|+++||+++++......
T Consensus 213 ~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~ 242 (265)
T 2i62_A 213 SSLPLGWETVRDAVEEAGYTIEQFEVISQN 242 (265)
T ss_dssp ECCCCCHHHHHHHHHHTTCEEEEEEEECCC
T ss_pred cccccCHHHHHHHHHHCCCEEEEEEEeccc
Confidence 223568899999999999999999887643
No 71
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.78 E-value=2.9e-19 Score=165.13 Aligned_cols=139 Identities=27% Similarity=0.366 Sum_probs=112.9
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCccccc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEYW 191 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 191 (340)
.++.+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++. ++++++.+|+.+ +++ .||+|++..++||+
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---~~v~~~~~d~~~-~~p--~~D~v~~~~~lh~~ 259 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS---NNLTYVGGDMFT-SIP--NADAVLLKYILHNW 259 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB---TTEEEEECCTTT-CCC--CCSEEEEESCGGGS
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC---CCcEEEeccccC-CCC--CccEEEeehhhccC
Confidence 4678999999999999999999999999999999 9999888753 569999999976 544 39999999999999
Q ss_pred CCHH--HHHHHHHHhccc---CcEEEEEccCCCchh------HhhHhhhHh-----hcCCCHHHHHHHHHHCCCcEEEEE
Q 019479 192 PDPQ--RGIKEAYRVLKI---GGKACVIGPVYPTFW------LSRFFADVW-----MLFPKEEEYIEWFQKAGFKDVKLK 255 (340)
Q Consensus 192 ~d~~--~~l~~~~~~Lkp---gG~l~i~~~~~~~~~------~~~~~~~~~-----~~~~~~~~~~~~l~~aGF~~v~~~ 255 (340)
+|.. .+|++++++||| ||++++.+...+... ......+.. ...++.++|.++++++||+++++.
T Consensus 260 ~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~ 339 (352)
T 1fp2_A 260 TDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQHYKIS 339 (352)
T ss_dssp CHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCCEEEEE
T ss_pred CHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCCCeeEEE
Confidence 9887 999999999999 999999876543211 111111111 234689999999999999999887
Q ss_pred Ee
Q 019479 256 RI 257 (340)
Q Consensus 256 ~~ 257 (340)
..
T Consensus 340 ~~ 341 (352)
T 1fp2_A 340 PL 341 (352)
T ss_dssp EE
T ss_pred ec
Confidence 75
No 72
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.78 E-value=7.6e-19 Score=151.78 Aligned_cols=144 Identities=21% Similarity=0.164 Sum_probs=111.5
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC--CCCcEEEEcCCCCCCCCCCCccEEEecCc--c
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP--LKECTIIEGDAEDLPFPTDYADRYVSAGS--I 188 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~--~~~i~~~~~d~~~~~~~~~~fD~v~~~~~--l 188 (340)
++.+|||+|||+|.++..+++.. .+++|+|+|+.+++.++++.. ..+++++++|+.++++++++||+|++..+ +
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~ 115 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYG--FEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVH 115 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGG
T ss_pred CCCeEEEEeccCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHh
Confidence 47899999999999999999884 499999999999999987632 26799999999988877889999999999 5
Q ss_pred cccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHh-----hHhhhHhhc---------------------------CCC
Q 019479 189 EYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLS-----RFFADVWML---------------------------FPK 236 (340)
Q Consensus 189 ~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~-----~~~~~~~~~---------------------------~~~ 236 (340)
++..+...+++++.++|||||++++.++........ ......+.. ...
T Consensus 116 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 195 (227)
T 1ve3_A 116 FEPLELNQVFKEVRRVLKPSGKFIMYFTDLRELLPRLKESLVVGQKYWISKVIPDQEERTVVIEFKSEQDSFRVRFNVWG 195 (227)
T ss_dssp CCHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHGGGCCC---------CCEEEEETTTTEEEEEC-----CCEEEEECCC
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEecChHHHHHHHHhhhhcccceeecccccCccccEEEEEeccchhhheeehhhhc
Confidence 566677899999999999999999986643211100 000000000 111
Q ss_pred HHHHHHHHHHCCCcEEEEEEeCC
Q 019479 237 EEEYIEWFQKAGFKDVKLKRIGP 259 (340)
Q Consensus 237 ~~~~~~~l~~aGF~~v~~~~~~~ 259 (340)
.++.++|+++||+.+++..++.
T Consensus 196 -~~~~~~l~~~GF~~v~~~~~~~ 217 (227)
T 1ve3_A 196 -KTGVELLAKLYFTKEAEEKVGN 217 (227)
T ss_dssp -HHHHHHHHTTTEEEEEEEEETT
T ss_pred -hHHHHHHHHHhhhHHHHHHhCC
Confidence 4789999999999999999864
No 73
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.78 E-value=3.8e-19 Score=157.68 Aligned_cols=145 Identities=13% Similarity=0.106 Sum_probs=107.9
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCC-ceEEEEeCCHHHHHHHHHhCCCC------------------------------
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDA-KNVTILDQSPHQLAKAKQKEPLK------------------------------ 160 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~g~D~s~~~~~~a~~~~~~~------------------------------ 160 (340)
.++.+|||||||+|.++..++.. + .+|+|+|+|+.|++.|+++....
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~--~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACD--SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGG--TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHh--hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 36789999999999887776655 4 47999999999999998753110
Q ss_pred --CcE-EEEcCCCCC-CC---CCCCccEEEecCccccc----CCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhh
Q 019479 161 --ECT-IIEGDAEDL-PF---PTDYADRYVSAGSIEYW----PDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFAD 229 (340)
Q Consensus 161 --~i~-~~~~d~~~~-~~---~~~~fD~v~~~~~l~~~----~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~ 229 (340)
++. ++++|+.+. ++ ..++||+|+++.++||+ ++...++++++++|||||++++.+.......... -..
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g-~~~ 210 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVG-KRE 210 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEET-TEE
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeC-CeE
Confidence 133 889999763 33 25689999999999986 3446899999999999999999865433211100 001
Q ss_pred HhhcCCCHHHHHHHHHHCCCcEEEEEEeCC
Q 019479 230 VWMLFPKEEEYIEWFQKAGFKDVKLKRIGP 259 (340)
Q Consensus 230 ~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~ 259 (340)
.....++.+++.++|+++||+++++.....
T Consensus 211 ~~~~~~~~~~l~~~l~~aGF~i~~~~~~~~ 240 (263)
T 2a14_A 211 FSCVALEKGEVEQAVLDAGFDIEQLLHSPQ 240 (263)
T ss_dssp EECCCCCHHHHHHHHHHTTEEEEEEEEECC
T ss_pred eeccccCHHHHHHHHHHCCCEEEEEeeccc
Confidence 112245899999999999999999988753
No 74
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.78 E-value=1.2e-18 Score=157.21 Aligned_cols=146 Identities=17% Similarity=0.280 Sum_probs=115.2
Q ss_pred CCCEEEEEcCccchHHHHHHHhC-CCceEEEEeCCHHHHHHHHHhC-----CCCCcEEEEcCCCCCCCCC------CCcc
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKE-----PLKECTIIEGDAEDLPFPT------DYAD 180 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~-----~~~~i~~~~~d~~~~~~~~------~~fD 180 (340)
++.+|||||||+|.++..+++.+ ++.+|+|+|+|+.+++.|+++. ...+++++++|++++++.+ ++||
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 115 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKID 115 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCee
Confidence 68899999999999999999876 7899999999999999999872 2468999999999988777 7999
Q ss_pred EEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccC---CCc-hhHhhHhhhHh-------hcC--CCHHHHHHHHHHC
Q 019479 181 RYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPV---YPT-FWLSRFFADVW-------MLF--PKEEEYIEWFQKA 247 (340)
Q Consensus 181 ~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~---~~~-~~~~~~~~~~~-------~~~--~~~~~~~~~l~~a 247 (340)
+|++..++||+ ++..+++++.++|||||++++.+.. ... ......+.... ..+ ...+.+.++++++
T Consensus 116 ~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~~~~~l~~~ 194 (299)
T 3g5t_A 116 MITAVECAHWF-DFEKFQRSAYANLRKDGTIAIWGYADPIFPDYPEFDDLMIEVPYGKQGLGPYWEQPGRSRLRNMLKDS 194 (299)
T ss_dssp EEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEEEECTTCGGGTTHHHHHHHCTTTTGGGSCTTHHHHHHTTTTTC
T ss_pred EEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEEecCCccccCcHHHHHHHHHhccCcccccchhhchhhHHHHHhhhcc
Confidence 99999999999 9999999999999999999884322 111 11112222111 112 4566788999999
Q ss_pred CC-----cEEEEEEeCC
Q 019479 248 GF-----KDVKLKRIGP 259 (340)
Q Consensus 248 GF-----~~v~~~~~~~ 259 (340)
|| +.++...+..
T Consensus 195 gfp~~~f~~v~~~~~~~ 211 (299)
T 3g5t_A 195 HLDPELFHDIQVSYFCA 211 (299)
T ss_dssp CCCTTTEEEEEEEEECG
T ss_pred CCChHHcCcceEEEecc
Confidence 99 6666666543
No 75
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.78 E-value=2.1e-18 Score=158.11 Aligned_cols=145 Identities=17% Similarity=0.196 Sum_probs=117.4
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC----CCCcEEEEcCCCCCCCCCCCccEEEecCc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECTIIEGDAEDLPFPTDYADRYVSAGS 187 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~----~~~i~~~~~d~~~~~~~~~~fD~v~~~~~ 187 (340)
.++.+|||+|||+|.++..+++.+|+.+++++|++ .+++.++++.. ..+++++.+|+.+.+++.+ ||+|++.++
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~~ 241 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGND-YDLVLLPNF 241 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC-EEEEEEESC
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCC-CcEEEEcch
Confidence 36789999999999999999999988999999999 99999987632 2469999999987665544 999999999
Q ss_pred ccccCCH--HHHHHHHHHhcccCcEEEEEccCCCch----hHhhHhhh---H---hhcCCCHHHHHHHHHHCCCcEEEEE
Q 019479 188 IEYWPDP--QRGIKEAYRVLKIGGKACVIGPVYPTF----WLSRFFAD---V---WMLFPKEEEYIEWFQKAGFKDVKLK 255 (340)
Q Consensus 188 l~~~~d~--~~~l~~~~~~LkpgG~l~i~~~~~~~~----~~~~~~~~---~---~~~~~~~~~~~~~l~~aGF~~v~~~ 255 (340)
+|++++. ..+++++.++|||||++++.+...+.. ........ . ....++.++|.++++++||+++++.
T Consensus 242 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~~ 321 (335)
T 2r3s_A 242 LHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQLH 321 (335)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEEE
T ss_pred hccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeEE
Confidence 9999665 589999999999999999987665421 11111110 0 2236789999999999999999987
Q ss_pred EeC
Q 019479 256 RIG 258 (340)
Q Consensus 256 ~~~ 258 (340)
.+.
T Consensus 322 ~~~ 324 (335)
T 2r3s_A 322 SLP 324 (335)
T ss_dssp CCT
T ss_pred ECC
Confidence 764
No 76
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.77 E-value=1.9e-19 Score=170.16 Aligned_cols=157 Identities=16% Similarity=0.127 Sum_probs=117.7
Q ss_pred HHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCC-CcEEEEcCCCCCCCCCC
Q 019479 99 DMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK-ECTIIEGDAEDLPFPTD 177 (340)
Q Consensus 99 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~-~i~~~~~d~~~~~~~~~ 177 (340)
.+...++..... .++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++.... ...+...+.+.++++++
T Consensus 94 ~~~~~l~~~~~~-~~~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~ 170 (416)
T 4e2x_A 94 MLARDFLATELT-GPDPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEG 170 (416)
T ss_dssp HHHHHHHHTTTC-SSSCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCC-CCCCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHcCCCcceeeechhhHhhcccCCC
Confidence 344555555543 46889999999999999999987 679999999999999999762111 11122333344556678
Q ss_pred CccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhH---hhcCCCHHHHHHHHHHCCCcEEEE
Q 019479 178 YADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADV---WMLFPKEEEYIEWFQKAGFKDVKL 254 (340)
Q Consensus 178 ~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~aGF~~v~~ 254 (340)
+||+|++.++++|++|+..++++++++|||||++++..+..........+... ...+++.+++.++++++||+++++
T Consensus 171 ~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~ 250 (416)
T 4e2x_A 171 PANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDV 250 (416)
T ss_dssp CEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEE
T ss_pred CEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEE
Confidence 99999999999999999999999999999999999986653322211111111 123568999999999999999999
Q ss_pred EEeC
Q 019479 255 KRIG 258 (340)
Q Consensus 255 ~~~~ 258 (340)
..+.
T Consensus 251 ~~~~ 254 (416)
T 4e2x_A 251 QRLP 254 (416)
T ss_dssp EEEC
T ss_pred EEcc
Confidence 8874
No 77
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.77 E-value=2.5e-18 Score=145.35 Aligned_cols=137 Identities=18% Similarity=0.219 Sum_probs=110.8
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCCCCCCCCCccEEEecCccc
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAEDLPFPTDYADRYVSAGSIE 189 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~ 189 (340)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++. ..++++++++|+.++++ +++||+|++..+++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~ 108 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVVLM 108 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESCGG
T ss_pred CCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcchhh
Confidence 5679999999999999999987 779999999999999998763 23479999999988877 78899999999999
Q ss_pred ccC--CHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEe
Q 019479 190 YWP--DPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRI 257 (340)
Q Consensus 190 ~~~--d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~ 257 (340)
|++ +...+++++.++|||||++++.+......+.. .......++.+++.+++++ |++++..+.
T Consensus 109 ~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~--f~~~~~~~~ 173 (199)
T 2xvm_A 109 FLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPC---TVGFPFAFKEGELRRYYEG--WERVKYNED 173 (199)
T ss_dssp GSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCC---CSCCSCCBCTTHHHHHTTT--SEEEEEECC
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCC---CCCCCCccCHHHHHHHhcC--CeEEEeccc
Confidence 997 77899999999999999988876443221110 0111224578899999986 999887765
No 78
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.77 E-value=9.3e-19 Score=157.52 Aligned_cols=147 Identities=16% Similarity=0.100 Sum_probs=116.1
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC----CCcEEEEcCCCCCCC-CCCCccEEEecC
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL----KECTIIEGDAEDLPF-PTDYADRYVSAG 186 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~----~~i~~~~~d~~~~~~-~~~~fD~v~~~~ 186 (340)
.++.+|||||||+|.++..+++. +..+|+|+|+|+.+++.|+++... .+++++++|+.+.++ .+++||+|++..
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECc
Confidence 46789999999999999998887 456999999999999999987432 368999999998877 578899999999
Q ss_pred cccc----cCCHHHHHHHHHHhcccCcEEEEEccCCCchhHh---------------------h-------------Hhh
Q 019479 187 SIEY----WPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLS---------------------R-------------FFA 228 (340)
Q Consensus 187 ~l~~----~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~---------------------~-------------~~~ 228 (340)
++|| ..+...+++++.++|||||++++..+........ . ...
T Consensus 142 ~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~ 221 (298)
T 1ri5_A 142 SFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVN 221 (298)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCS
T ss_pred hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEchhhc
Confidence 9987 4566789999999999999999987653211100 0 000
Q ss_pred hHhhcCCCHHHHHHHHHHCCCcEEEEEEeCC
Q 019479 229 DVWMLFPKEEEYIEWFQKAGFKDVKLKRIGP 259 (340)
Q Consensus 229 ~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~ 259 (340)
.....+.+.+++.++++++||++++...+..
T Consensus 222 ~~~~~~~~~~~l~~ll~~aGf~~v~~~~~~~ 252 (298)
T 1ri5_A 222 NCIEYFVDFTRMVDGFKRLGLSLVERKGFID 252 (298)
T ss_dssp SEEEECCCHHHHHHHHHTTTEEEEEEEEHHH
T ss_pred CCcccccCHHHHHHHHHHcCCEEEEecCHHH
Confidence 0112356889999999999999999988754
No 79
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.77 E-value=1e-18 Score=161.91 Aligned_cols=145 Identities=19% Similarity=0.249 Sum_probs=116.4
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---C-CCCcEEEEcCCCCCCCCCCCccEEEecCc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---P-LKECTIIEGDAEDLPFPTDYADRYVSAGS 187 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~-~~~i~~~~~d~~~~~~~~~~fD~v~~~~~ 187 (340)
.++.+|||||||+|.++..+++.+|+.+++++|+ +.+++.++++. . ..+++++.+|+.+ +++. .||+|++..+
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~v 258 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPR-KADAIILSFV 258 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSS-CEEEEEEESC
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCC-CccEEEEccc
Confidence 4678999999999999999999988899999999 99999998763 1 2479999999975 3343 4999999999
Q ss_pred ccccCCHH--HHHHHHHHhcccCcEEEEEccC-CCch---hHhhHhhh-----HhhcCCCHHHHHHHHHHCCCcEEEEEE
Q 019479 188 IEYWPDPQ--RGIKEAYRVLKIGGKACVIGPV-YPTF---WLSRFFAD-----VWMLFPKEEEYIEWFQKAGFKDVKLKR 256 (340)
Q Consensus 188 l~~~~d~~--~~l~~~~~~LkpgG~l~i~~~~-~~~~---~~~~~~~~-----~~~~~~~~~~~~~~l~~aGF~~v~~~~ 256 (340)
+|++++.. .+++++.++|||||++++.+.. .+.. ........ .....++.++|.++++++||+++++..
T Consensus 259 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 338 (360)
T 1tw3_A 259 LLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVRQ 338 (360)
T ss_dssp GGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEEEe
Confidence 99998874 8999999999999999998876 3321 11111111 112357999999999999999999888
Q ss_pred eCC
Q 019479 257 IGP 259 (340)
Q Consensus 257 ~~~ 259 (340)
...
T Consensus 339 ~~~ 341 (360)
T 1tw3_A 339 LPS 341 (360)
T ss_dssp EEC
T ss_pred CCC
Confidence 753
No 80
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.77 E-value=4.8e-19 Score=159.30 Aligned_cols=115 Identities=23% Similarity=0.234 Sum_probs=95.6
Q ss_pred HHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC----C---CCCcEEEEcCCCC
Q 019479 99 DMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE----P---LKECTIIEGDAED 171 (340)
Q Consensus 99 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~----~---~~~i~~~~~d~~~ 171 (340)
.+...+...+.. .++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++. . ..++.+..+|+.+
T Consensus 44 ~~~~~l~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~ 120 (293)
T 3thr_A 44 EYKAWLLGLLRQ-HGCHRVLDVACGTGVDSIMLVEE--GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLT 120 (293)
T ss_dssp HHHHHHHHHHHH-TTCCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGG
T ss_pred HHHHHHHHHhcc-cCCCEEEEecCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhh
Confidence 344444443332 36789999999999999999998 679999999999999998752 1 1467889999987
Q ss_pred CC---CCCCCccEEEec-CcccccCC-------HHHHHHHHHHhcccCcEEEEEcc
Q 019479 172 LP---FPTDYADRYVSA-GSIEYWPD-------PQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 172 ~~---~~~~~fD~v~~~-~~l~~~~d-------~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
++ +++++||+|++. .+++|+.+ ...++++++++|||||++++..+
T Consensus 121 ~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 121 LDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp HHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 76 678899999998 89999999 88999999999999999998754
No 81
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.77 E-value=8e-19 Score=157.69 Aligned_cols=144 Identities=21% Similarity=0.221 Sum_probs=107.1
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCC--------------------------------
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK-------------------------------- 160 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~-------------------------------- 160 (340)
++.+|||||||+|..+..++.. ++.+|+|+|+|+.|++.|+++....
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACS-HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGG-GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhcc-CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 6789999999999965444443 4679999999999999998753210
Q ss_pred -CcEEEEcCCCC-CCC-----CCCCccEEEecCcccc----cCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhh
Q 019479 161 -ECTIIEGDAED-LPF-----PTDYADRYVSAGSIEY----WPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFAD 229 (340)
Q Consensus 161 -~i~~~~~d~~~-~~~-----~~~~fD~v~~~~~l~~----~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~ 229 (340)
.++++.+|+.+ +++ ++++||+|+++.++++ ++++..++++++++|||||+|++............ -..
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~-~~~ 228 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAG-EAR 228 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEET-TEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcC-Cee
Confidence 13566779877 553 3466999999999999 66778999999999999999999753322111100 000
Q ss_pred HhhcCCCHHHHHHHHHHCCCcEEEEEEeC
Q 019479 230 VWMLFPKEEEYIEWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 230 ~~~~~~~~~~~~~~l~~aGF~~v~~~~~~ 258 (340)
....+++.+++.++|+++||+++++....
T Consensus 229 ~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 257 (289)
T 2g72_A 229 LTVVPVSEEEVREALVRSGYKVRDLRTYI 257 (289)
T ss_dssp EECCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred eeeccCCHHHHHHHHHHcCCeEEEeeEee
Confidence 11235689999999999999999988775
No 82
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.77 E-value=1.1e-17 Score=149.09 Aligned_cols=139 Identities=15% Similarity=0.089 Sum_probs=109.4
Q ss_pred CCCEEEEEcCcc---chHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC-CCCcEEEEcCCCCCC-----------CCCC
Q 019479 113 RNMRVVDVGGGT---GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-LKECTIIEGDAEDLP-----------FPTD 177 (340)
Q Consensus 113 ~~~~vLDiGcG~---G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~-~~~i~~~~~d~~~~~-----------~~~~ 177 (340)
...+|||||||+ |.++..+.+..|+.+|+++|+|+.|++.|+++.. ..+++++++|+.+.. ++..
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 457999999999 9988888787888999999999999999998843 367999999997521 2234
Q ss_pred CccEEEecCcccccCC--HHHHHHHHHHhcccCcEEEEEccCCCc-hhHhhH---hhhH--hhcCCCHHHHHHHHHHCCC
Q 019479 178 YADRYVSAGSIEYWPD--PQRGIKEAYRVLKIGGKACVIGPVYPT-FWLSRF---FADV--WMLFPKEEEYIEWFQKAGF 249 (340)
Q Consensus 178 ~fD~v~~~~~l~~~~d--~~~~l~~~~~~LkpgG~l~i~~~~~~~-~~~~~~---~~~~--~~~~~~~~~~~~~l~~aGF 249 (340)
+||+|++..++||+++ ...++++++++|||||+|++.+..... ...... +... ...+++.+++.++| .||
T Consensus 157 ~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ei~~~l--~G~ 234 (274)
T 2qe6_A 157 RPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTGLPAQQKLARITRENLGEGWARTPEEIERQF--GDF 234 (274)
T ss_dssp SCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSSCHHHHHHHHHHHHHHSCCCCBCHHHHHHTT--TTC
T ss_pred CCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcchHHHHHHHHHHHhcCCCCccCCHHHHHHHh--CCC
Confidence 7999999999999987 789999999999999999998766532 111111 1111 12357999999999 599
Q ss_pred cEEE
Q 019479 250 KDVK 253 (340)
Q Consensus 250 ~~v~ 253 (340)
++++
T Consensus 235 ~l~~ 238 (274)
T 2qe6_A 235 ELVE 238 (274)
T ss_dssp EECT
T ss_pred eEcc
Confidence 8765
No 83
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.76 E-value=1.4e-18 Score=153.67 Aligned_cols=138 Identities=30% Similarity=0.440 Sum_probs=107.1
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCccccc-
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEYW- 191 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~- 191 (340)
++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++.. . .++++|+.++++++++||+|++..+++|+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~-~--~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~ 128 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGV-K--NVVEAKAEDLPFPSGAFEAVLALGDVLSYV 128 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTC-S--CEEECCTTSCCSCTTCEEEEEECSSHHHHC
T ss_pred CCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcC-C--CEEECcHHHCCCCCCCEEEEEEcchhhhcc
Confidence 6789999999999999999987 6799999999999999998865 2 28899999988888899999998876665
Q ss_pred CCHHHHHHHHHHhcccCcEEEEEccCCCchhHh-----------hHhhhH-----------hhcCCCHHHHHHHHHHCCC
Q 019479 192 PDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLS-----------RFFADV-----------WMLFPKEEEYIEWFQKAGF 249 (340)
Q Consensus 192 ~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~-----------~~~~~~-----------~~~~~~~~~~~~~l~~aGF 249 (340)
+++..+++++.++|||||++++..++....... ...... ...+++.+++.++ +||
T Consensus 129 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l---aGf 205 (260)
T 2avn_A 129 ENKDKAFSEIRRVLVPDGLLIATVDNFYTFLQQMIEKDAWDQITRFLKTQTTSVGTTLFSFNSYAFKPEDLDSL---EGF 205 (260)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHHHHHHCEEEEECSSEEEEEECBCGGGGSSC---TTE
T ss_pred ccHHHHHHHHHHHcCCCeEEEEEeCChHHHHHHhhcchhHHHHHHHHhccccccCCCceeEEEeccCHHHHHHh---cCc
Confidence 788999999999999999999986653211100 000000 0114577777766 888
Q ss_pred cEEEEEEeC
Q 019479 250 KDVKLKRIG 258 (340)
Q Consensus 250 ~~v~~~~~~ 258 (340)
+++++..+.
T Consensus 206 ~~~~~~~~~ 214 (260)
T 2avn_A 206 ETVDIRGIG 214 (260)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEECCC
Confidence 888777654
No 84
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.76 E-value=1.8e-17 Score=139.29 Aligned_cols=128 Identities=20% Similarity=0.163 Sum_probs=110.5
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEec-Ccccc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSA-GSIEY 190 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~-~~l~~ 190 (340)
+++.+|||+|||+|.++..+++. +.+++++|+++.+++.++++. +++.++++|+.++++++++||+|++. .++++
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~--~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~ 120 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDF--PEARWVVGDLSVDQISETDFDLIVSAGNVMGF 120 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHC--TTSEEEECCTTTSCCCCCCEEEEEECCCCGGG
T ss_pred cCCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhC--CCCcEEEcccccCCCCCCceeEEEECCcHHhh
Confidence 36789999999999999999987 679999999999999999876 46899999998888778899999998 78888
Q ss_pred cCC--HHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEe
Q 019479 191 WPD--PQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRI 257 (340)
Q Consensus 191 ~~d--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~ 257 (340)
+.+ ...+++++.++|||||++++..+... ..+.+++.++++++||++++....
T Consensus 121 ~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~--------------~~~~~~~~~~l~~~Gf~~~~~~~~ 175 (195)
T 3cgg_A 121 LAEDGREPALANIHRALGADGRAVIGFGAGR--------------GWVFGDFLEVAERVGLELENAFES 175 (195)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEETTS--------------SCCHHHHHHHHHHHTEEEEEEESS
T ss_pred cChHHHHHHHHHHHHHhCCCCEEEEEeCCCC--------------CcCHHHHHHHHHHcCCEEeeeecc
Confidence 843 36899999999999999998765432 247889999999999998877654
No 85
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.76 E-value=6.4e-19 Score=150.35 Aligned_cols=145 Identities=26% Similarity=0.262 Sum_probs=113.1
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC--CCCcEEEEcCCCCCCCCCCCccEEEecCccc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP--LKECTIIEGDAEDLPFPTDYADRYVSAGSIE 189 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~--~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~ 189 (340)
.++.+|||+|||+|.++..++.. ++.+|+|+|+|+.+++.++++.. ..+++++++|+.++++++++||+|++..+++
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 100 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIF 100 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGG
T ss_pred CCCCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHH
Confidence 36789999999999985444444 47899999999999999987632 2578999999999888888999999999999
Q ss_pred cc--CCHHHHHHHHHHhcccCcEEEEEccCCCchhHhh--------H-----hhhHhhcCCCHHHHHHHHHHCCCcEEEE
Q 019479 190 YW--PDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSR--------F-----FADVWMLFPKEEEYIEWFQKAGFKDVKL 254 (340)
Q Consensus 190 ~~--~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~--------~-----~~~~~~~~~~~~~~~~~l~~aGF~~v~~ 254 (340)
|+ .+...+++++.++|||||++++.+.......... + ....+..+++.+++.++++++||...+.
T Consensus 101 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~~~~~ 180 (209)
T 2p8j_A 101 HMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVLFKED 180 (209)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEEEEEE
T ss_pred hCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCceeeee
Confidence 99 5677999999999999999999876543321100 0 0011224668999999999999987766
Q ss_pred EEe
Q 019479 255 KRI 257 (340)
Q Consensus 255 ~~~ 257 (340)
...
T Consensus 181 ~~~ 183 (209)
T 2p8j_A 181 RVV 183 (209)
T ss_dssp EEE
T ss_pred eee
Confidence 544
No 86
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.76 E-value=1.7e-17 Score=153.73 Aligned_cols=153 Identities=23% Similarity=0.291 Sum_probs=119.6
Q ss_pred HHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---C-CCCcEEEEcCCCCCCCCCC
Q 019479 102 DEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---P-LKECTIIEGDAEDLPFPTD 177 (340)
Q Consensus 102 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~-~~~i~~~~~d~~~~~~~~~ 177 (340)
..++..... .++.+|||||||+|.++..+++.+|+.+++++|+ +.+++.++++. . ..+++++.+|+.+.++++
T Consensus 180 ~~l~~~~~~-~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~- 256 (359)
T 1x19_A 180 QLLLEEAKL-DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPE- 256 (359)
T ss_dssp HHHHHHCCC-TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCC-
T ss_pred HHHHHhcCC-CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCC-
Confidence 334444443 4678999999999999999999999999999999 99999999763 2 245999999998876554
Q ss_pred CccEEEecCcccccCC--HHHHHHHHHHhcccCcEEEEEccCCCch---hHhhHhhh---Hh-h----cCCCHHHHHHHH
Q 019479 178 YADRYVSAGSIEYWPD--PQRGIKEAYRVLKIGGKACVIGPVYPTF---WLSRFFAD---VW-M----LFPKEEEYIEWF 244 (340)
Q Consensus 178 ~fD~v~~~~~l~~~~d--~~~~l~~~~~~LkpgG~l~i~~~~~~~~---~~~~~~~~---~~-~----~~~~~~~~~~~l 244 (340)
+|+|++..++|++++ ...++++++++|||||++++.+...+.. ........ .. . .+++.++|.+++
T Consensus 257 -~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll 335 (359)
T 1x19_A 257 -ADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEIL 335 (359)
T ss_dssp -CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHH
T ss_pred -CCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHH
Confidence 499999999999988 5789999999999999999987554321 11111100 00 1 137999999999
Q ss_pred HHCCCcEEEEEEeC
Q 019479 245 QKAGFKDVKLKRIG 258 (340)
Q Consensus 245 ~~aGF~~v~~~~~~ 258 (340)
+++||+++++..+.
T Consensus 336 ~~aGf~~v~~~~~~ 349 (359)
T 1x19_A 336 ESLGYKDVTMVRKY 349 (359)
T ss_dssp HHHTCEEEEEEEET
T ss_pred HHCCCceEEEEecC
Confidence 99999999988764
No 87
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.76 E-value=6.1e-17 Score=137.77 Aligned_cols=138 Identities=17% Similarity=0.221 Sum_probs=110.4
Q ss_pred HHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCCCCCC
Q 019479 99 DMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAEDLPFP 175 (340)
Q Consensus 99 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~~~~~ 175 (340)
.+...++..+.. .++.+|||+|||+|.++..+++..|..+|+++|+|+.+++.++++. ..++++++++|+.+....
T Consensus 27 ~i~~~~l~~l~~-~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 105 (204)
T 3e05_A 27 EVRAVTLSKLRL-QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDD 105 (204)
T ss_dssp HHHHHHHHHTTC-CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTT
T ss_pred HHHHHHHHHcCC-CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhc
Confidence 344444555444 4788999999999999999999977799999999999999999763 336799999999664434
Q ss_pred CCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEE
Q 019479 176 TDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLK 255 (340)
Q Consensus 176 ~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~ 255 (340)
.++||+|++..+++ +...+++++.++|||||++++...... +.+++.++++++|| .+++.
T Consensus 106 ~~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~~----------------~~~~~~~~l~~~g~-~~~~~ 165 (204)
T 3e05_A 106 LPDPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAVTLD----------------TLTKAVEFLEDHGY-MVEVA 165 (204)
T ss_dssp SCCCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEECBHH----------------HHHHHHHHHHHTTC-EEEEE
T ss_pred CCCCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEecccc----------------cHHHHHHHHHHCCC-ceeEE
Confidence 46799999988776 788999999999999999999764321 35678889999999 55555
Q ss_pred Ee
Q 019479 256 RI 257 (340)
Q Consensus 256 ~~ 257 (340)
.+
T Consensus 166 ~~ 167 (204)
T 3e05_A 166 CV 167 (204)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 88
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.75 E-value=7e-18 Score=144.76 Aligned_cols=132 Identities=19% Similarity=0.258 Sum_probs=104.9
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC-CCcEEEEcCCCCCCCCCCCccEEEecCcccc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-KECTIIEGDAEDLPFPTDYADRYVSAGSIEY 190 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~-~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 190 (340)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++... .+++++++|+.+++ ++++||+|++..+++|
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~ 126 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPH--CKRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVAEVLYY 126 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGG--EEEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEESCGGG
T ss_pred CCCCcEEEEcCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEccHHHh
Confidence 46789999999999999999988 57999999999999999988543 57999999999887 6788999999999999
Q ss_pred cCCHH---HHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEE
Q 019479 191 WPDPQ---RGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKL 254 (340)
Q Consensus 191 ~~d~~---~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~ 254 (340)
++++. .+++++.++|||||++++..+.... ...|......+.+..++.+ ++..++.
T Consensus 127 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~-~~~~~e~ 185 (216)
T 3ofk_A 127 LEDMTQMRTAIDNMVKMLAPGGHLVFGSARDAT-------CRRWGHVAGAETVITILTE-ALTEVER 185 (216)
T ss_dssp SSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHH-------HHHTTCSCCHHHHHHHHHH-HSEEEEE
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEEEecCCCc-------chhhhhhhhHHHHHHHHHh-hccceEE
Confidence 99874 6799999999999999998654321 1112223455666666654 3554443
No 89
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.75 E-value=1.1e-18 Score=161.64 Aligned_cols=139 Identities=24% Similarity=0.280 Sum_probs=112.6
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCcccccC
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEYWP 192 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 192 (340)
+..+|||||||+|.++..+++++|+.+++++|+ +.+++.+++ .++++++.+|+.+ +++ .||+|++..++|+++
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---~~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~ 265 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG---NENLNFVGGDMFK-SIP--SADAVLLKWVLHDWN 265 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC---CSSEEEEECCTTT-CCC--CCSEEEEESCGGGSC
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc---CCCcEEEeCccCC-CCC--CceEEEEcccccCCC
Confidence 568999999999999999999999999999999 788877764 2569999999977 554 499999999999999
Q ss_pred CHH--HHHHHHHHhccc---CcEEEEEccCCCchh------HhhHhhhH------hhcCCCHHHHHHHHHHCCCcEEEEE
Q 019479 193 DPQ--RGIKEAYRVLKI---GGKACVIGPVYPTFW------LSRFFADV------WMLFPKEEEYIEWFQKAGFKDVKLK 255 (340)
Q Consensus 193 d~~--~~l~~~~~~Lkp---gG~l~i~~~~~~~~~------~~~~~~~~------~~~~~~~~~~~~~l~~aGF~~v~~~ 255 (340)
|.. .+|++++++||| ||++++.+...+... ......+. ....++.++|.++++++||+++++.
T Consensus 266 d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~ 345 (358)
T 1zg3_A 266 DEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKIT 345 (358)
T ss_dssp HHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCCeeEEE
Confidence 987 999999999999 999999876533211 11111111 1235689999999999999999988
Q ss_pred EeC
Q 019479 256 RIG 258 (340)
Q Consensus 256 ~~~ 258 (340)
...
T Consensus 346 ~~~ 348 (358)
T 1zg3_A 346 PIS 348 (358)
T ss_dssp EET
T ss_pred ecC
Confidence 753
No 90
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.74 E-value=2.6e-18 Score=155.19 Aligned_cols=146 Identities=12% Similarity=0.070 Sum_probs=107.6
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCC---------CcEEEEcCC------CCC--CCC
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK---------ECTIIEGDA------EDL--PFP 175 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~---------~i~~~~~d~------~~~--~~~ 175 (340)
++.+|||||||+|..+..++.. ++.+|+|+|+|+.|++.|+++.... +++|.+.|+ +++ +++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~-~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG-EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhc-CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 5789999999999877766665 3579999999999999999874211 256888887 222 245
Q ss_pred CCCccEEEecCccccc---CCHHHHHHHHHHhcccCcEEEEEccCCCchhH----------------h------------
Q 019479 176 TDYADRYVSAGSIEYW---PDPQRGIKEAYRVLKIGGKACVIGPVYPTFWL----------------S------------ 224 (340)
Q Consensus 176 ~~~fD~v~~~~~l~~~---~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~----------------~------------ 224 (340)
+++||+|+|..++|++ .+...++++++++|||||++++..+....... .
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 206 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADDR 206 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEETTE
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeeccccccc
Confidence 6789999999999875 45579999999999999999987653211000 0
Q ss_pred --hHh-----hhHhhcCCCHHHHHHHHHHCCCcEEEEEEeCC
Q 019479 225 --RFF-----ADVWMLFPKEEEYIEWFQKAGFKDVKLKRIGP 259 (340)
Q Consensus 225 --~~~-----~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~ 259 (340)
.+. .+....+.+.+++.++++++||++++...+..
T Consensus 207 ~~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~f~~ 248 (302)
T 2vdw_A 207 IVVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVDFAT 248 (302)
T ss_dssp EEEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEEHHH
T ss_pred cceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecChHH
Confidence 000 00111256789999999999999999988754
No 91
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.73 E-value=1.1e-17 Score=143.46 Aligned_cols=115 Identities=23% Similarity=0.228 Sum_probs=98.8
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCccccc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEYW 191 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 191 (340)
.++.+|||||||+|.++..+ ..+|+|+|+|+. +++++++|+.++++++++||+|++..++|+
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l-----~~~v~~~D~s~~------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~- 127 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSI-----RNPVHCFDLASL------------DPRVTVCDMAQVPLEDESVDVAVFCLSLMG- 127 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHC-----CSCEEEEESSCS------------STTEEESCTTSCSCCTTCEEEEEEESCCCS-
T ss_pred CCCCeEEEECCcCCHHHHHh-----hccEEEEeCCCC------------CceEEEeccccCCCCCCCEeEEEEehhccc-
Confidence 46789999999999998776 368999999886 578899999988888889999999999975
Q ss_pred CCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEeC
Q 019479 192 PDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 192 ~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~ 258 (340)
.+...+++++.++|+|||++++.+.... +.+.+++.++++++||++++.....
T Consensus 128 ~~~~~~l~~~~~~L~~gG~l~i~~~~~~--------------~~~~~~~~~~l~~~Gf~~~~~~~~~ 180 (215)
T 2zfu_A 128 TNIRDFLEEANRVLKPGGLLKVAEVSSR--------------FEDVRTFLRAVTKLGFKIVSKDLTN 180 (215)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEECGGG--------------CSCHHHHHHHHHHTTEEEEEEECCS
T ss_pred cCHHHHHHHHHHhCCCCeEEEEEEcCCC--------------CCCHHHHHHHHHHCCCEEEEEecCC
Confidence 8999999999999999999999875421 3378999999999999998865543
No 92
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.73 E-value=1.9e-17 Score=143.31 Aligned_cols=133 Identities=20% Similarity=0.132 Sum_probs=107.6
Q ss_pred hHHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCC-CCCCCC
Q 019479 97 TEDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDA-EDLPFP 175 (340)
Q Consensus 97 ~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~-~~~~~~ 175 (340)
...+...++.... .++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++ .++++++++|+ +.++++
T Consensus 34 ~~~l~~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~--~~~~~~~~~d~~~~~~~~ 107 (226)
T 3m33_A 34 PELTFDLWLSRLL--TPQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARAN--APHADVYEWNGKGELPAG 107 (226)
T ss_dssp TTHHHHHHHHHHC--CTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHH--CTTSEEEECCSCSSCCTT
T ss_pred HHHHHHHHHHhcC--CCCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHh--CCCceEEEcchhhccCCc
Confidence 3444444443222 46889999999999999999998 78999999999999999988 46899999999 567777
Q ss_pred -CCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEE
Q 019479 176 -TDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKL 254 (340)
Q Consensus 176 -~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~ 254 (340)
+++||+|+++ .++..+++++.++|||||+++... .+.+.+++.+.++++||+++++
T Consensus 108 ~~~~fD~v~~~------~~~~~~l~~~~~~LkpgG~l~~~~-----------------~~~~~~~~~~~l~~~Gf~~~~~ 164 (226)
T 3m33_A 108 LGAPFGLIVSR------RGPTSVILRLPELAAPDAHFLYVG-----------------PRLNVPEVPERLAAVGWDIVAE 164 (226)
T ss_dssp CCCCEEEEEEE------SCCSGGGGGHHHHEEEEEEEEEEE-----------------SSSCCTHHHHHHHHTTCEEEEE
T ss_pred CCCCEEEEEeC------CCHHHHHHHHHHHcCCCcEEEEeC-----------------CcCCHHHHHHHHHHCCCeEEEE
Confidence 8899999987 466788999999999999998211 1335678899999999999887
Q ss_pred EEeC
Q 019479 255 KRIG 258 (340)
Q Consensus 255 ~~~~ 258 (340)
....
T Consensus 165 ~~~~ 168 (226)
T 3m33_A 165 DHVS 168 (226)
T ss_dssp EEEE
T ss_pred Eeee
Confidence 7653
No 93
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.72 E-value=1.8e-17 Score=148.59 Aligned_cols=137 Identities=15% Similarity=0.151 Sum_probs=107.2
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC--CCcEEEEcCCCCCCCCCCCccEEEecCcccc
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL--KECTIIEGDAEDLPFPTDYADRYVSAGSIEY 190 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~--~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 190 (340)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++... .+++++++|+.+.+. +++||+|++..+++|
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~ 196 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVVFMF 196 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGG
T ss_pred CCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccchhh
Confidence 6789999999999999999998 67999999999999999977321 278999999988776 788999999999999
Q ss_pred cCCH--HHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEe
Q 019479 191 WPDP--QRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRI 257 (340)
Q Consensus 191 ~~d~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~ 257 (340)
+++. ..+++++.++|||||++++........... .......++.+++.++++. |+++...+.
T Consensus 197 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~--~~~~~~~~~ 260 (286)
T 3m70_A 197 LNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPC---PLPFSFTFAENELKEYYKD--WEFLEYNEN 260 (286)
T ss_dssp SCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCC---SSCCSCCBCTTHHHHHTTT--SEEEEEECC
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCC---CCCccccCCHHHHHHHhcC--CEEEEEEcc
Confidence 9654 489999999999999987765432211000 0111224567888888854 988877544
No 94
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.72 E-value=9.8e-19 Score=152.55 Aligned_cols=152 Identities=16% Similarity=0.182 Sum_probs=106.6
Q ss_pred chHHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC--CCcEEEEcCCCCC-
Q 019479 96 WTEDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL--KECTIIEGDAEDL- 172 (340)
Q Consensus 96 ~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~--~~i~~~~~d~~~~- 172 (340)
|...+...+..... .++.+|||||||+|..+..+++.. ..+++++|+|+.+++.|+++... .+++++.+|+++.
T Consensus 45 we~~~m~~~a~~~~--~~G~rVLdiG~G~G~~~~~~~~~~-~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~ 121 (236)
T 3orh_A 45 WETPYMHALAAAAS--SKGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVA 121 (236)
T ss_dssp GGHHHHHHHHHHHT--TTCEEEEEECCTTSHHHHHHTTSC-EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHG
T ss_pred HHHHHHHHHHHhhc--cCCCeEEEECCCccHHHHHHHHhC-CcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhc
Confidence 44444444444333 378999999999999999998874 46899999999999999987443 4578888888653
Q ss_pred -CCCCCCccEEEe-----cCcccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhc--CCCHHHHHHHH
Q 019479 173 -PFPTDYADRYVS-----AGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWML--FPKEEEYIEWF 244 (340)
Q Consensus 173 -~~~~~~fD~v~~-----~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l 244 (340)
++++++||.|+. ...++|+.+...++++++|+|||||++.+.+.... .......+.. ....+.+...|
T Consensus 122 ~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~~----~~~~~~~~~~~~~~~~~~~~~~L 197 (236)
T 3orh_A 122 PTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSW----GELMKSKYSDITIMFEETQVPAL 197 (236)
T ss_dssp GGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHH----HHHTTTTCSCHHHHHHHHTHHHH
T ss_pred ccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEecCCc----hhhhhhhhhhhhhhhHHHHHHHH
Confidence 467888999975 45667788889999999999999999987542110 0000000000 00134566778
Q ss_pred HHCCCcEEEE
Q 019479 245 QKAGFKDVKL 254 (340)
Q Consensus 245 ~~aGF~~v~~ 254 (340)
.++||+++.+
T Consensus 198 ~eaGF~~~~i 207 (236)
T 3orh_A 198 LEAGFRRENI 207 (236)
T ss_dssp HHHTCCGGGE
T ss_pred HHcCCeEEEE
Confidence 8999986444
No 95
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.72 E-value=3.2e-17 Score=146.32 Aligned_cols=149 Identities=22% Similarity=0.292 Sum_probs=117.2
Q ss_pred hcccCCCCchHHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCCCcEE
Q 019479 88 DHVINPGHWTEDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECTI 164 (340)
Q Consensus 88 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~ 164 (340)
...+.++..++.+...++.... .++.+|||+|||+|..+..+++.+|+.+|+++|+|+.+++.++++. ..+++++
T Consensus 86 ~~~~ipr~~te~l~~~~l~~~~--~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~ 163 (276)
T 2b3t_A 86 PATLIPRPDTECLVEQALARLP--EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHI 163 (276)
T ss_dssp TTSCCCCTTHHHHHHHHHHHSC--SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEE
T ss_pred CCCcccCchHHHHHHHHHHhcc--cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEE
Confidence 3445566677777777777654 3678999999999999999999888899999999999999999773 3347999
Q ss_pred EEcCCCCCCCCCCCccEEEecCcc-------------cccC------------CHHHHHHHHHHhcccCcEEEEEccCCC
Q 019479 165 IEGDAEDLPFPTDYADRYVSAGSI-------------EYWP------------DPQRGIKEAYRVLKIGGKACVIGPVYP 219 (340)
Q Consensus 165 ~~~d~~~~~~~~~~fD~v~~~~~l-------------~~~~------------d~~~~l~~~~~~LkpgG~l~i~~~~~~ 219 (340)
+++|+.+. +++++||+|+++..+ +|.+ +...+++++.++|||||++++...
T Consensus 164 ~~~d~~~~-~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~--- 239 (276)
T 2b3t_A 164 LQSDWFSA-LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG--- 239 (276)
T ss_dssp ECCSTTGG-GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC---
T ss_pred EEcchhhh-cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC---
Confidence 99999763 346789999998433 3322 335789999999999999998743
Q ss_pred chhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEE
Q 019479 220 TFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKR 256 (340)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~ 256 (340)
..+.+++.++++++||+.+++..
T Consensus 240 --------------~~~~~~~~~~l~~~Gf~~v~~~~ 262 (276)
T 2b3t_A 240 --------------WQQGEAVRQAFILAGYHDVETCR 262 (276)
T ss_dssp --------------SSCHHHHHHHHHHTTCTTCCEEE
T ss_pred --------------chHHHHHHHHHHHCCCcEEEEEe
Confidence 23578899999999998766544
No 96
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.72 E-value=2.3e-17 Score=144.92 Aligned_cols=101 Identities=25% Similarity=0.287 Sum_probs=84.0
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC--CCCcEEEEcCCCCCCCCCCCccEEEecC-cc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP--LKECTIIEGDAEDLPFPTDYADRYVSAG-SI 188 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~--~~~i~~~~~d~~~~~~~~~~fD~v~~~~-~l 188 (340)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++.. ..+++++++|+.+++++ ++||+|++.. .+
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~ 116 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTI 116 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGG
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccC-CCccEEEEcCCch
Confidence 36789999999999999999987 7899999999999999997632 23689999999887754 6799999874 44
Q ss_pred cccC--CHHHHHHHHHHhcccCcEEEEEc
Q 019479 189 EYWP--DPQRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 189 ~~~~--d~~~~l~~~~~~LkpgG~l~i~~ 215 (340)
+++. +...+++++.++|||||++++..
T Consensus 117 ~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 117 MYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 4443 44689999999999999998754
No 97
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.71 E-value=1.7e-17 Score=142.67 Aligned_cols=145 Identities=18% Similarity=0.132 Sum_probs=105.5
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHH----Hh---CCCCCcEEEEcCCCCCCCCCCCccEEEe
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAK----QK---EPLKECTIIEGDAEDLPFPTDYADRYVS 184 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~----~~---~~~~~i~~~~~d~~~~~~~~~~fD~v~~ 184 (340)
.++.+|||||||+|.++..+++.+|+.+|+|+|+|+.|++.+. ++ ...++++++++|+.++++.+++ |.|++
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~ 104 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHV 104 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEE
Confidence 3678999999999999999999988999999999999888532 21 2335899999999998887766 77763
Q ss_pred cC---cc--cccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCC----CHHHHHHHHHHCCCcEEEEE
Q 019479 185 AG---SI--EYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFP----KEEEYIEWFQKAGFKDVKLK 255 (340)
Q Consensus 185 ~~---~l--~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~aGF~~v~~~ 255 (340)
.. .. +|++++..+++++.++|||||++++............... ..... ..+.+.++++++||+++++.
T Consensus 105 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~aGf~i~~~~ 182 (218)
T 3mq2_A 105 LMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVG--EHPEPTPDSADEWLAPRYAEAGWKLADCR 182 (218)
T ss_dssp ESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGT--TCCCCCHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred EccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccc--cCCccchHHHHHHHHHHHHHcCCCceeee
Confidence 32 22 2677888999999999999999998532211000000000 00011 23458889999999999998
Q ss_pred EeCC
Q 019479 256 RIGP 259 (340)
Q Consensus 256 ~~~~ 259 (340)
.+..
T Consensus 183 ~~~~ 186 (218)
T 3mq2_A 183 YLEP 186 (218)
T ss_dssp EECH
T ss_pred ccch
Confidence 8753
No 98
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.71 E-value=1.8e-16 Score=136.00 Aligned_cols=127 Identities=21% Similarity=0.116 Sum_probs=102.9
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCCCC--CCCCCccEEEecCc
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAEDLP--FPTDYADRYVSAGS 187 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~~~--~~~~~fD~v~~~~~ 187 (340)
++.+|||||||+|.++..+++..|+.+++|+|+|+.+++.|+++. ...++.++++|+.+++ +++++||+|+++..
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 578999999999999999999988899999999999999998763 2368999999998866 66788999999865
Q ss_pred ccccC--------CHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEE
Q 019479 188 IEYWP--------DPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLK 255 (340)
Q Consensus 188 l~~~~--------d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~ 255 (340)
..+.. ....+++++.++|||||.+++...... ..+.+.+.++++||+.+.+.
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~----------------~~~~~~~~~~~~g~~~~~~~ 180 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRG----------------LFEYSLVSFSQYGMKLNGVW 180 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHH----------------HHHHHHHHHHHHTCEEEEEE
T ss_pred CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHH----------------HHHHHHHHHHHCCCeeeecc
Confidence 43322 125799999999999999988753211 12456678889999987665
No 99
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.71 E-value=1.3e-16 Score=131.94 Aligned_cols=119 Identities=17% Similarity=0.123 Sum_probs=101.4
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCcccccC
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEYWP 192 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 192 (340)
++.+|||+|||+|.++..+++. + +|+|+|+|+.+++. ..+++++++|+.+ ++++++||+|+++..+++.+
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~--~-~v~gvD~s~~~~~~------~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~~~ 92 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKR--N-TVVSTDLNIRALES------HRGGNLVRADLLC-SINQESVDVVVFNPPYVPDT 92 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTT--S-EEEEEESCHHHHHT------CSSSCEEECSTTT-TBCGGGCSEEEECCCCBTTC
T ss_pred CCCeEEEeccCccHHHHHHHhc--C-cEEEEECCHHHHhc------ccCCeEEECChhh-hcccCCCCEEEECCCCccCC
Confidence 5679999999999999999988 4 99999999999988 3679999999987 55668899999999988765
Q ss_pred CH---------HHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEeC
Q 019479 193 DP---------QRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 193 d~---------~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~ 258 (340)
+. ..+++++.+.| |||++++..... .+.+++.++++++||+.+.+....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~----------------~~~~~l~~~l~~~gf~~~~~~~~~ 150 (170)
T 3q87_B 93 DDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA----------------NRPKEVLARLEERGYGTRILKVRK 150 (170)
T ss_dssp CCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG----------------GCHHHHHHHHHHTTCEEEEEEEEE
T ss_pred ccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC----------------CCHHHHHHHHHHCCCcEEEEEeec
Confidence 54 57889999999 999999876432 257889999999999988887754
No 100
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.71 E-value=3.7e-16 Score=134.71 Aligned_cols=139 Identities=12% Similarity=0.060 Sum_probs=105.9
Q ss_pred CCCCEEEEEcCccchHHHHHHHhC-CCceEEEEeCCHHHHHHHHHhCC-CCCcEEEEcCCCC---CCCCCCCccEEEecC
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEP-LKECTIIEGDAED---LPFPTDYADRYVSAG 186 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~-~~~i~~~~~d~~~---~~~~~~~fD~v~~~~ 186 (340)
++|.+|||+|||+|.++..+++.. |.++|+|+|+++.|++.++++.. ..|+..+.+|... .+...+++|+|++.
T Consensus 76 kpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d- 154 (233)
T 4df3_A 76 KEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYAD- 154 (233)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEEC-
T ss_pred CCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEe-
Confidence 689999999999999999999986 56899999999999999998854 4689999998854 34567789999864
Q ss_pred cccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEeCC
Q 019479 187 SIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRIGP 259 (340)
Q Consensus 187 ~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~ 259 (340)
+.+..+...+++++.+.|||||++++............. ....++..+.|+++||+.++...+.+
T Consensus 155 -~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~-------~~~~~~ev~~L~~~GF~l~e~i~L~p 219 (233)
T 4df3_A 155 -VAQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEP-------SEVYKREIKTLMDGGLEIKDVVHLDP 219 (233)
T ss_dssp -CCCTTHHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCC-------CHHHHHHHHHHHHTTCCEEEEEECTT
T ss_pred -ccCChhHHHHHHHHHHhccCCCEEEEEEecccCCCCCCh-------HHHHHHHHHHHHHCCCEEEEEEccCC
Confidence 344456778999999999999999887432211100000 00113445678999999999888754
No 101
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.71 E-value=4.2e-16 Score=135.22 Aligned_cols=138 Identities=22% Similarity=0.213 Sum_probs=105.6
Q ss_pred ccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC-CCCcEEEEcCCCC----CCCCCCCc
Q 019479 105 LEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-LKECTIIEGDAED----LPFPTDYA 179 (340)
Q Consensus 105 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~-~~~i~~~~~d~~~----~~~~~~~f 179 (340)
+..... .++.+|||+|||+|.++..+++.++..+|+|+|+|+.+++.++++.. ..++.++.+|+.+ .++. ++|
T Consensus 67 l~~~~~-~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~ 144 (230)
T 1fbn_A 67 LKVMPI-KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKV 144 (230)
T ss_dssp CCCCCC-CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCE
T ss_pred ccccCC-CCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccE
Confidence 444433 47889999999999999999999766899999999999999988743 3689999999987 6665 789
Q ss_pred cEEEecCcccccCCH---HHHHHHHHHhcccCcEEEEEccCC--C-chhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEE
Q 019479 180 DRYVSAGSIEYWPDP---QRGIKEAYRVLKIGGKACVIGPVY--P-TFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVK 253 (340)
Q Consensus 180 D~v~~~~~l~~~~d~---~~~l~~~~~~LkpgG~l~i~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~ 253 (340)
|+|+ +++.++ ..+++++.++|||||++++..... + ....... ..+++. +|+++||+.++
T Consensus 145 D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~---------~~~~l~-~l~~~Gf~~~~ 209 (230)
T 1fbn_A 145 DVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEI---------FKEQKE-ILEAGGFKIVD 209 (230)
T ss_dssp EEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHH---------HHHHHH-HHHHHTEEEEE
T ss_pred EEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHh---------hHHHHH-HHHHCCCEEEE
Confidence 9999 455566 678999999999999999861100 0 0000011 136677 89999999998
Q ss_pred EEEeCC
Q 019479 254 LKRIGP 259 (340)
Q Consensus 254 ~~~~~~ 259 (340)
...+.+
T Consensus 210 ~~~~~~ 215 (230)
T 1fbn_A 210 EVDIEP 215 (230)
T ss_dssp EEECTT
T ss_pred EEccCC
Confidence 887754
No 102
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.70 E-value=6.2e-17 Score=139.99 Aligned_cols=148 Identities=14% Similarity=0.131 Sum_probs=99.3
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCC-HHHHHHH---HHh---CCCCCcEEEEcCCCCCCCC-CCCccEEEe
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQS-PHQLAKA---KQK---EPLKECTIIEGDAEDLPFP-TDYADRYVS 184 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s-~~~~~~a---~~~---~~~~~i~~~~~d~~~~~~~-~~~fD~v~~ 184 (340)
++.+|||||||+|.++..+++..++.+|+|+|+| +.|++.| +++ ...++++++++|+++++.. .+.+|.|++
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~ 103 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISI 103 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEE
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEE
Confidence 6789999999999999999987788999999999 7777776 544 2346799999999888531 134555554
Q ss_pred cCcccc-----cCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCC-----HHHHHHHHHHCCCcEEEE
Q 019479 185 AGSIEY-----WPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPK-----EEEYIEWFQKAGFKDVKL 254 (340)
Q Consensus 185 ~~~l~~-----~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~aGF~~v~~ 254 (340)
+....+ ..+...++++++++|||||++++................ .....+ .+++.++++++||+++++
T Consensus 104 ~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~el~~~l~~aGf~v~~~ 182 (225)
T 3p2e_A 104 LFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKR-GLPLLSKAYFLSEQYKAELSNSGFRIDDV 182 (225)
T ss_dssp ESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC---------------CCHHHHHSHHHHHHHHHHTCEEEEE
T ss_pred eCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhc-CCCCCChhhcchHHHHHHHHHcCCCeeee
Confidence 432211 123457899999999999999984332222110000000 000112 235899999999999999
Q ss_pred EEeCCcc
Q 019479 255 KRIGPKW 261 (340)
Q Consensus 255 ~~~~~~~ 261 (340)
..+...+
T Consensus 183 ~~~~~~~ 189 (225)
T 3p2e_A 183 KELDNEY 189 (225)
T ss_dssp EEECHHH
T ss_pred eecCHHH
Confidence 8887543
No 103
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.70 E-value=2e-17 Score=144.16 Aligned_cols=148 Identities=17% Similarity=0.187 Sum_probs=103.0
Q ss_pred chHHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC--CCCcEEEEcCCCCC-
Q 019479 96 WTEDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP--LKECTIIEGDAEDL- 172 (340)
Q Consensus 96 ~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~--~~~i~~~~~d~~~~- 172 (340)
|...+...+.... ..++.+|||||||+|.++..+++. +..+|+|+|+|+.+++.|+++.. ..+++++++|+.++
T Consensus 45 ~~~~~~~~l~~~~--~~~~~~vLDiGcGtG~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~ 121 (236)
T 1zx0_A 45 WETPYMHALAAAA--SSKGGRVLEVGFGMAIAASKVQEA-PIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVA 121 (236)
T ss_dssp GGHHHHHHHHHHH--TTTCEEEEEECCTTSHHHHHHHTS-CEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHG
T ss_pred HHHHHHHHHHhhc--CCCCCeEEEEeccCCHHHHHHHhc-CCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhh
Confidence 4444444433332 236789999999999999999765 34599999999999999998753 25689999999887
Q ss_pred -CCCCCCccEEEe-cCcccccC-----CHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhc--CCCHHHHHHH
Q 019479 173 -PFPTDYADRYVS-AGSIEYWP-----DPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWML--FPKEEEYIEW 243 (340)
Q Consensus 173 -~~~~~~fD~v~~-~~~l~~~~-----d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 243 (340)
++++++||+|++ .+.+ +.. +...++++++++|||||++++.+..... ......+.. ....+.....
T Consensus 122 ~~~~~~~fD~V~~d~~~~-~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 196 (236)
T 1zx0_A 122 PTLPDGHFDGILYDTYPL-SEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWG----ELMKSKYSDITIMFEETQVPA 196 (236)
T ss_dssp GGSCTTCEEEEEECCCCC-BGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHH----HHTTTTCSCHHHHHHHHTHHH
T ss_pred cccCCCceEEEEECCccc-chhhhhhhhHHHHHHHHHHhcCCCeEEEEEecCcHH----HhhchhhhhhhhhccHHHHHH
Confidence 788899999999 5543 222 2347799999999999999987643110 000000000 0012455678
Q ss_pred HHHCCCcE
Q 019479 244 FQKAGFKD 251 (340)
Q Consensus 244 l~~aGF~~ 251 (340)
+.++||+.
T Consensus 197 l~~aGF~~ 204 (236)
T 1zx0_A 197 LLEAGFRR 204 (236)
T ss_dssp HHHTTCCG
T ss_pred HHHCCCCC
Confidence 99999984
No 104
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.70 E-value=1.5e-16 Score=138.89 Aligned_cols=129 Identities=16% Similarity=0.121 Sum_probs=104.4
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCCCCCC---CCCccEEEec
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAEDLPFP---TDYADRYVSA 185 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~~~~~---~~~fD~v~~~ 185 (340)
.++.+|||||||+|..+..++...++.+|+|+|+|+.+++.++++. ...+++++++|++++++. +++||+|++.
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 3678999999999999999998777899999999999999998762 335799999999876643 5789999987
Q ss_pred CcccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEeC
Q 019479 186 GSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 186 ~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~ 258 (340)
. +.+...+++++.++|||||++++........ ..+++.+.++++||++++...+.
T Consensus 149 ~----~~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~--------------~~~~~~~~l~~~g~~~~~~~~~~ 203 (240)
T 1xdz_A 149 A----VARLSVLSELCLPLVKKNGLFVALKAASAEE--------------ELNAGKKAITTLGGELENIHSFK 203 (240)
T ss_dssp C----CSCHHHHHHHHGGGEEEEEEEEEEECC-CHH--------------HHHHHHHHHHHTTEEEEEEEEEE
T ss_pred c----cCCHHHHHHHHHHhcCCCCEEEEEeCCCchH--------------HHHHHHHHHHHcCCeEeEEEEEe
Confidence 6 4678899999999999999998874221110 13467788999999998887653
No 105
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.69 E-value=2e-16 Score=131.27 Aligned_cols=136 Identities=13% Similarity=0.166 Sum_probs=105.3
Q ss_pred HHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCC-CcEEEEcCCCC-CCC
Q 019479 100 MRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLK-ECTIIEGDAED-LPF 174 (340)
Q Consensus 100 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~-~i~~~~~d~~~-~~~ 174 (340)
++..++..+.. .++.+|||+|||+|.++..+++.+|+.+|+++|+|+.+++.++++. ..+ ++ ++.+|..+ ++.
T Consensus 13 ~~~~~~~~~~~-~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~ 90 (178)
T 3hm2_A 13 VRALAISALAP-KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDD 90 (178)
T ss_dssp HHHHHHHHHCC-CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGG
T ss_pred HHHHHHHHhcc-cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhc
Confidence 44444444443 4678999999999999999999988899999999999999999763 223 67 88888844 333
Q ss_pred CCCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEE
Q 019479 175 PTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKL 254 (340)
Q Consensus 175 ~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~ 254 (340)
.+++||+|++..++++ ..+++++.++|||||++++...... +...+.+++++.|++..++
T Consensus 91 ~~~~~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~ 150 (178)
T 3hm2_A 91 VPDNPDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVTVE----------------SEQMLWALRKQFGGTISSF 150 (178)
T ss_dssp CCSCCSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEECSHH----------------HHHHHHHHHHHHCCEEEEE
T ss_pred cCCCCCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEeeccc----------------cHHHHHHHHHHcCCeeEEE
Confidence 3378999999999987 5789999999999999998865432 3456778889999887665
Q ss_pred EEe
Q 019479 255 KRI 257 (340)
Q Consensus 255 ~~~ 257 (340)
...
T Consensus 151 ~~~ 153 (178)
T 3hm2_A 151 AIS 153 (178)
T ss_dssp EEE
T ss_pred Eee
Confidence 443
No 106
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.69 E-value=6.2e-16 Score=131.71 Aligned_cols=134 Identities=13% Similarity=0.157 Sum_probs=105.2
Q ss_pred HHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCC-CcEEEEcCCCCCCCC
Q 019479 100 MRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLK-ECTIIEGDAEDLPFP 175 (340)
Q Consensus 100 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~-~i~~~~~d~~~~~~~ 175 (340)
+...++..+.. .++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.|+++. ..+ +++++++|+.+....
T Consensus 43 ~~~~~l~~l~~-~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~ 119 (204)
T 3njr_A 43 MRALTLAALAP-RRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALAD 119 (204)
T ss_dssp HHHHHHHHHCC-CTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTT
T ss_pred HHHHHHHhcCC-CCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhccc
Confidence 33444444443 46889999999999999999998 789999999999999999773 334 899999999873223
Q ss_pred CCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEE
Q 019479 176 TDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLK 255 (340)
Q Consensus 176 ~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~ 255 (340)
.++||+|++...+ +.. +++++.++|||||++++...... +..++.+++++.||++.++.
T Consensus 120 ~~~~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~~~----------------~~~~~~~~l~~~g~~i~~i~ 178 (204)
T 3njr_A 120 LPLPEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAVTLE----------------SETLLTQLHARHGGQLLRID 178 (204)
T ss_dssp SCCCSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEECSHH----------------HHHHHHHHHHHHCSEEEEEE
T ss_pred CCCCCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEecCcc----------------cHHHHHHHHHhCCCcEEEEE
Confidence 4579999987744 566 99999999999999998865421 35677789999999887765
Q ss_pred Ee
Q 019479 256 RI 257 (340)
Q Consensus 256 ~~ 257 (340)
..
T Consensus 179 ~~ 180 (204)
T 3njr_A 179 IA 180 (204)
T ss_dssp EE
T ss_pred ee
Confidence 54
No 107
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.69 E-value=9e-18 Score=143.49 Aligned_cols=150 Identities=20% Similarity=0.118 Sum_probs=98.9
Q ss_pred cCCCCchHHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCC--CcEEEEcC
Q 019479 91 INPGHWTEDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK--ECTIIEGD 168 (340)
Q Consensus 91 ~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~--~i~~~~~d 168 (340)
+.++..++.+...++.......++.+|||+|||+|.++..+++..++.+++|+|+|+.+++.++++.... +++++++|
T Consensus 8 ~~p~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d 87 (215)
T 4dzr_A 8 LIPRPDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAAD 87 (215)
T ss_dssp GSCCHHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHH
T ss_pred cCCCccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcc
Confidence 3455555566666666554435788999999999999999999988889999999999999999875432 67888888
Q ss_pred CCCCCCCC-----CCccEEEecCcccccCCH--------------------------HHHHHHHHHhcccCcEEEEEccC
Q 019479 169 AEDLPFPT-----DYADRYVSAGSIEYWPDP--------------------------QRGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 169 ~~~~~~~~-----~~fD~v~~~~~l~~~~d~--------------------------~~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
+.+ ++++ ++||+|+++..+++..+. ..+++++.++|||||++++....
T Consensus 88 ~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 88 GIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp HHH-HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT
T ss_pred hHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 866 4444 889999997555443221 57888999999999994444332
Q ss_pred CCchhHhhHhhhHhhcCCCHHHHHHHHH--HCCCcEEEEEEe
Q 019479 218 YPTFWLSRFFADVWMLFPKEEEYIEWFQ--KAGFKDVKLKRI 257 (340)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~aGF~~v~~~~~ 257 (340)
. ...+++.++++ ++||..+++...
T Consensus 167 ~----------------~~~~~~~~~l~~~~~gf~~~~~~~~ 192 (215)
T 4dzr_A 167 H----------------NQADEVARLFAPWRERGFRVRKVKD 192 (215)
T ss_dssp T----------------SCHHHHHHHTGGGGGGTEECCEEEC
T ss_pred C----------------ccHHHHHHHHHHhhcCCceEEEEEe
Confidence 1 24677888999 999988776554
No 108
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.68 E-value=2.6e-16 Score=134.96 Aligned_cols=127 Identities=19% Similarity=0.120 Sum_probs=100.4
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCCCC--CCCCCccEEEecCc
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAEDLP--FPTDYADRYVSAGS 187 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~~~--~~~~~fD~v~~~~~ 187 (340)
++.+|||||||+|.++..+++.+|+.+|+|+|+|+.+++.|+++. ...|++++++|+.+++ +++++||.|++...
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 577999999999999999999988999999999999999998763 3468999999998765 66788999988654
Q ss_pred ccccCC--------HHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEE
Q 019479 188 IEYWPD--------PQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLK 255 (340)
Q Consensus 188 l~~~~d--------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~ 255 (340)
..+... ...+++++.++|||||.+++...... ..+.+.+.++++||..+...
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~----------------~~~~~~~~~~~~g~~~~~~~ 177 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRG----------------LFEYSLKSFSEYGLLLTYVS 177 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHH----------------HHHHHHHHHHHHTCEEEEEE
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHH----------------HHHHHHHHHHHCCCcccccc
Confidence 433221 25789999999999999998753211 12345667888899876543
No 109
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.67 E-value=4e-16 Score=136.95 Aligned_cols=130 Identities=18% Similarity=0.151 Sum_probs=105.1
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCCCCCC---CCCccEEEec
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAEDLPFP---TDYADRYVSA 185 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~~~~~---~~~fD~v~~~ 185 (340)
.++.+|||||||+|..+..++..+|+.+|+++|+|+.+++.++++. ...|++++++|+++++.. .++||+|++.
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 4678999999999999999999988999999999999999999763 345799999999876532 4789999986
Q ss_pred CcccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEeCC
Q 019479 186 GSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRIGP 259 (340)
Q Consensus 186 ~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~ 259 (340)
. +.+...+++.+.++|||||++++........ ...++.+.++..||+++++..+..
T Consensus 159 a----~~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~--------------e~~~~~~~l~~~G~~~~~~~~~~~ 214 (249)
T 3g89_A 159 A----VAPLCVLSELLLPFLEVGGAAVAMKGPRVEE--------------ELAPLPPALERLGGRLGEVLALQL 214 (249)
T ss_dssp S----SCCHHHHHHHHGGGEEEEEEEEEEECSCCHH--------------HHTTHHHHHHHHTEEEEEEEEEEC
T ss_pred C----cCCHHHHHHHHHHHcCCCeEEEEEeCCCcHH--------------HHHHHHHHHHHcCCeEEEEEEeeC
Confidence 4 3577899999999999999998765322111 123566778889999999888743
No 110
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.67 E-value=1.5e-15 Score=131.51 Aligned_cols=129 Identities=18% Similarity=0.132 Sum_probs=101.3
Q ss_pred CCCCEEEEEcCc-cchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC--CCcEEEEcCCCCC-CCCCCCccEEEecCc
Q 019479 112 DRNMRVVDVGGG-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL--KECTIIEGDAEDL-PFPTDYADRYVSAGS 187 (340)
Q Consensus 112 ~~~~~vLDiGcG-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~--~~i~~~~~d~~~~-~~~~~~fD~v~~~~~ 187 (340)
+++.+|||+||| +|.++..+++.. +.+|+|+|+|+.+++.|+++... .+++++++|+..+ ++++++||+|+++..
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp 132 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPP 132 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCC
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCC
Confidence 478999999999 999999999986 78999999999999999977321 2799999997433 455688999999877
Q ss_pred ccccCC-------------------HHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCC
Q 019479 188 IEYWPD-------------------PQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAG 248 (340)
Q Consensus 188 l~~~~d-------------------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 248 (340)
+++..+ ...+++++.++|||||++++..+... ...+++.++++++|
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---------------~~~~~~~~~l~~~g 197 (230)
T 3evz_A 133 YYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE---------------KLLNVIKERGIKLG 197 (230)
T ss_dssp CC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH---------------HHHHHHHHHHHHTT
T ss_pred CcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH---------------hHHHHHHHHHHHcC
Confidence 665433 36789999999999999998754321 13567888999999
Q ss_pred CcEEEEEE
Q 019479 249 FKDVKLKR 256 (340)
Q Consensus 249 F~~v~~~~ 256 (340)
|++..+..
T Consensus 198 ~~~~~~~~ 205 (230)
T 3evz_A 198 YSVKDIKF 205 (230)
T ss_dssp CEEEEEEE
T ss_pred CceEEEEe
Confidence 97766544
No 111
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.67 E-value=9.1e-16 Score=131.03 Aligned_cols=106 Identities=20% Similarity=0.187 Sum_probs=92.5
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC-CCcEEEEcCCCCCCCCCCCccEEEecCcccc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-KECTIIEGDAEDLPFPTDYADRYVSAGSIEY 190 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~-~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 190 (340)
.++.+|||+|||+|.++..+++..+ .+|+|+|+|+.+++.++++... ++++++++|+.++++++++||+|++..++++
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~-~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 119 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGF-PNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDA 119 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTC-CCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHHH
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCC-CcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchhh
Confidence 4678999999999999999998832 3899999999999999988543 6799999999988888889999999988876
Q ss_pred cC---------------CHHHHHHHHHHhcccCcEEEEEccCC
Q 019479 191 WP---------------DPQRGIKEAYRVLKIGGKACVIGPVY 218 (340)
Q Consensus 191 ~~---------------d~~~~l~~~~~~LkpgG~l~i~~~~~ 218 (340)
+. +...+++++.++|||||++++.++..
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 64 45789999999999999999998654
No 112
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.67 E-value=4.8e-16 Score=132.23 Aligned_cols=125 Identities=19% Similarity=0.151 Sum_probs=104.1
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCCCCCCCCCccEEEecCcc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAEDLPFPTDYADRYVSAGSI 188 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l 188 (340)
.++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|+++. ...+++++++|+.+. .+++||+|+++..+
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~--~~~~fD~i~~~~~~ 135 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKL-GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD--VDGKFDLIVANILA 135 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT--CCSCEEEEEEESCH
T ss_pred cCCCEEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc--CCCCceEEEECCcH
Confidence 36789999999999999998875 5679999999999999999873 334599999999764 35789999999887
Q ss_pred cccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEeC
Q 019479 189 EYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 189 ~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~ 258 (340)
+++ ..+++++.++|||||++++.+.... +.+++.++++++||+++++...+
T Consensus 136 ~~~---~~~l~~~~~~L~~gG~l~~~~~~~~----------------~~~~~~~~~~~~Gf~~~~~~~~~ 186 (205)
T 3grz_A 136 EIL---LDLIPQLDSHLNEDGQVIFSGIDYL----------------QLPKIEQALAENSFQIDLKMRAG 186 (205)
T ss_dssp HHH---HHHGGGSGGGEEEEEEEEEEEEEGG----------------GHHHHHHHHHHTTEEEEEEEEET
T ss_pred HHH---HHHHHHHHHhcCCCCEEEEEecCcc----------------cHHHHHHHHHHcCCceEEeeccC
Confidence 753 6889999999999999998754322 46788899999999999887754
No 113
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.66 E-value=1.9e-16 Score=131.47 Aligned_cols=120 Identities=13% Similarity=0.026 Sum_probs=97.3
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCC---CCCCccEEEecCcc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPF---PTDYADRYVSAGSI 188 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~---~~~~fD~v~~~~~l 188 (340)
.++.+|||||||. +++|+|+.|++.|+++.. .+++++++|++++++ ++++||+|++..++
T Consensus 11 ~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~-~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l 73 (176)
T 2ld4_A 11 SAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTG-NEGRVSVENIKQLLQSAHKESSFDIILSGLVP 73 (176)
T ss_dssp CTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTT-TTSEEEEEEGGGGGGGCCCSSCEEEEEECCST
T ss_pred CCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcc-cCcEEEEechhcCccccCCCCCEeEEEECChh
Confidence 5789999999996 239999999999998865 359999999988876 78899999999999
Q ss_pred ccc-CCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEe
Q 019479 189 EYW-PDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRI 257 (340)
Q Consensus 189 ~~~-~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~ 257 (340)
||+ ++...++++++++|||||++++.++...... . ....++.+++.++|+++|| +. +...
T Consensus 74 ~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~-----~--~~~~~~~~~~~~~l~~aGf-i~-~~~~ 134 (176)
T 2ld4_A 74 GSTTLHSAEILAEIARILRPGGCLFLKEPVETAVD-----N--NSKVKTASKLCSALTLSGL-VE-VKEL 134 (176)
T ss_dssp TCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSC-----S--SSSSCCHHHHHHHHHHTTC-EE-EEEE
T ss_pred hhcccCHHHHHHHHHHHCCCCEEEEEEcccccccc-----c--ccccCCHHHHHHHHHHCCC-cE-eecC
Confidence 999 9999999999999999999999654322100 0 1123478999999999999 43 5554
No 114
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.65 E-value=4.5e-16 Score=138.75 Aligned_cols=124 Identities=18% Similarity=0.284 Sum_probs=105.2
Q ss_pred CCCCEEEEEcCccchHHHHHHHh-CCCceEEEEeCCHHHHHHHHHhC----CCCCcEEEEcCCCCCCCCCCCccEEEecC
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKH-VDAKNVTILDQSPHQLAKAKQKE----PLKECTIIEGDAEDLPFPTDYADRYVSAG 186 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~----~~~~i~~~~~d~~~~~~~~~~fD~v~~~~ 186 (340)
.++.+|||+|||+|.++..+++. .|+.+|+++|+++.+++.|+++. ..++++++++|+.+ ++++++||+|++
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~-- 185 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMYDAVIA-- 185 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCEEEEEE--
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCccEEEE--
Confidence 47889999999999999999997 57789999999999999999873 33579999999987 556778999998
Q ss_pred cccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEe
Q 019479 187 SIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRI 257 (340)
Q Consensus 187 ~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~ 257 (340)
+++++..+++++.++|||||++++..+... ..+++.+.++++||..++....
T Consensus 186 ---~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~----------------~~~~~~~~l~~~Gf~~~~~~~~ 237 (275)
T 1yb2_A 186 ---DIPDPWNHVQKIASMMKPGSVATFYLPNFD----------------QSEKTVLSLSASGMHHLETVEL 237 (275)
T ss_dssp ---CCSCGGGSHHHHHHTEEEEEEEEEEESSHH----------------HHHHHHHHSGGGTEEEEEEEEE
T ss_pred ---cCcCHHHHHHHHHHHcCCCCEEEEEeCCHH----------------HHHHHHHHHHHCCCeEEEEEEE
Confidence 567888999999999999999999875421 2356777888999999888775
No 115
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.65 E-value=4.9e-16 Score=129.96 Aligned_cols=137 Identities=17% Similarity=0.131 Sum_probs=95.7
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCCCC-CCCCCccEEEecC-
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAEDLP-FPTDYADRYVSAG- 186 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~~~-~~~~~fD~v~~~~- 186 (340)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++. ..++++++++|...++ +.+++||+|+++.
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~ 98 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLG 98 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCC
Confidence 47889999999999999999988 789999999999999999873 2367999998877643 3467899999873
Q ss_pred cccc--------cCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEeC
Q 019479 187 SIEY--------WPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 187 ~l~~--------~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~ 258 (340)
.+++ ..+...+++++.++|||||++++............. ....++.+.+...+|.+.....+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~~~~~~~~ 170 (185)
T 3mti_A 99 YLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEK--------DAVLEYVIGLDQRVFTAMLYQPLN 170 (185)
T ss_dssp -----------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHH--------HHHHHHHHHSCTTTEEEEEEEESS
T ss_pred CCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHH--------HHHHHHHHhCCCceEEEEEehhhc
Confidence 2222 123347889999999999999987653221100000 012344445556678877766653
No 116
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.65 E-value=4.5e-16 Score=141.30 Aligned_cols=145 Identities=20% Similarity=0.132 Sum_probs=111.0
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC----------CCCCcEEEEcCCCCCC----CC--C
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE----------PLKECTIIEGDAEDLP----FP--T 176 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~----------~~~~i~~~~~d~~~~~----~~--~ 176 (340)
++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.++++. ...+++++++|+++++ ++ +
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 6789999999999999999885 5789999999999999998763 2247899999998865 43 4
Q ss_pred CCccEEEecCccccc-CC---HHHHHHHHHHhcccCcEEEEEccCCCchhHh-------hH--------hh---------
Q 019479 177 DYADRYVSAGSIEYW-PD---PQRGIKEAYRVLKIGGKACVIGPVYPTFWLS-------RF--------FA--------- 228 (340)
Q Consensus 177 ~~fD~v~~~~~l~~~-~d---~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~-------~~--------~~--------- 228 (340)
++||+|++..++|++ .+ ...+++++.++|||||++++..+........ .+ +.
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 192 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFG 192 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHHHHTTSSSSEEECSSEEEEESCSSCCCSSC
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHHHHHHHHhhccCccCCeeEEEEeCCCCCCCCcc
Confidence 589999999999988 44 4589999999999999999886543210000 00 00
Q ss_pred -----------hHhhcCCCHHHHHHHHHHCCCcEEEEEEeC
Q 019479 229 -----------DVWMLFPKEEEYIEWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 229 -----------~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~ 258 (340)
+......+.+++.+++++.||++++...+.
T Consensus 193 ~~~~f~l~~~~~~~~~~~~~~~~~~l~~~~G~~~v~~~~f~ 233 (313)
T 3bgv_A 193 CKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTFL 233 (313)
T ss_dssp CEEEEEEC---CCEEECCCHHHHHHHGGGGTEEEEEEEEHH
T ss_pred ceEEEEECCcccCcceEEcHHHHHHHHHHcCcEEEEecCHH
Confidence 000113567899999999999999987764
No 117
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.65 E-value=9.2e-16 Score=136.30 Aligned_cols=100 Identities=18% Similarity=0.153 Sum_probs=85.3
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCCCCCCCCCccEEEecCcc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAEDLPFPTDYADRYVSAGSI 188 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l 188 (340)
+++.+|||||||+|.++..++.+.++++|+|+|+|+++++.|+++. ...+++++++|+.+++ +++||+|++...
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV~~~a~- 197 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVLMVAAL- 197 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEEEECTT-
T ss_pred CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEEEECCC-
Confidence 5899999999999987655545556899999999999999999873 2378999999998764 688999998654
Q ss_pred cccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 189 EYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 189 ~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
.++..++++++.++|||||+|++.+.
T Consensus 198 --~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 198 --AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp --CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred --ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 57889999999999999999998763
No 118
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.64 E-value=1.5e-15 Score=133.67 Aligned_cols=135 Identities=20% Similarity=0.229 Sum_probs=110.1
Q ss_pred HHhccccCCCCCCCEEEEEcCccchHHHHHHHh-CCCceEEEEeCCHHHHHHHHHhC----CCCCcEEEEcCCCCCCCCC
Q 019479 102 DEALEPADLFDRNMRVVDVGGGTGFTTLGIVKH-VDAKNVTILDQSPHQLAKAKQKE----PLKECTIIEGDAEDLPFPT 176 (340)
Q Consensus 102 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~----~~~~i~~~~~d~~~~~~~~ 176 (340)
..++..... .++.+|||+|||+|.++..+++. .|+.+|+++|+++.+++.++++. ...++++..+|+.+.++++
T Consensus 86 ~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~ 164 (258)
T 2pwy_A 86 SAMVTLLDL-APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEE 164 (258)
T ss_dssp HHHHHHTTC-CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCT
T ss_pred HHHHHHcCC-CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCC
Confidence 344444443 47889999999999999999998 45789999999999999999873 3468999999998877777
Q ss_pred CCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEE
Q 019479 177 DYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKR 256 (340)
Q Consensus 177 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~ 256 (340)
++||+|++ +.+++..+++++.++|||||++++..+... ...++.+.++++||..+++.+
T Consensus 165 ~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~----------------~~~~~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 165 AAYDGVAL-----DLMEPWKVLEKAALALKPDRFLVAYLPNIT----------------QVLELVRAAEAHPFRLERVLE 223 (258)
T ss_dssp TCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESCHH----------------HHHHHHHHHTTTTEEEEEEEE
T ss_pred CCcCEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCCHH----------------HHHHHHHHHHHCCCceEEEEE
Confidence 88999998 466778899999999999999999875421 134666788899999988877
Q ss_pred eC
Q 019479 257 IG 258 (340)
Q Consensus 257 ~~ 258 (340)
..
T Consensus 224 ~~ 225 (258)
T 2pwy_A 224 VG 225 (258)
T ss_dssp EE
T ss_pred ee
Confidence 53
No 119
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.64 E-value=1.4e-15 Score=149.99 Aligned_cols=146 Identities=16% Similarity=0.125 Sum_probs=111.4
Q ss_pred CCCEEEEEcCccchHHHHHHHhC-CCceEEEEeCCHHHHHHHHHhC---------CCCCcEEEEcCCCCCCCCCCCccEE
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKE---------PLKECTIIEGDAEDLPFPTDYADRY 182 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~---------~~~~i~~~~~d~~~~~~~~~~fD~v 182 (340)
++.+|||||||+|.++..+++.. +..+|+|+|+|+.+++.|+++. ...+++++++|+.++++.+++||+|
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlV 800 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIG 800 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEE
Confidence 68899999999999999999985 3479999999999999998731 3357999999999999888999999
Q ss_pred EecCcccccCCHH--HHHHHHHHhcccCcEEEEEccCCCchhHhhHh-----------------hhHhh-cCCCHHHHHH
Q 019479 183 VSAGSIEYWPDPQ--RGIKEAYRVLKIGGKACVIGPVYPTFWLSRFF-----------------ADVWM-LFPKEEEYIE 242 (340)
Q Consensus 183 ~~~~~l~~~~d~~--~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~-----------------~~~~~-~~~~~~~~~~ 242 (340)
++..+++|++++. .+++++.++|||| .+++..++.........+ ....+ ...+.+++..
T Consensus 801 V~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~eyN~lF~~Lnp~tr~~dPd~~~~~~fRh~DHrFEWTReEFr~ 879 (950)
T 3htx_A 801 TCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEFNTILQRSTPETQEENNSEPQLPKFRNHDHKFEWTREQFNQ 879 (950)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGGHHHHTCC------------CCSSCSCSSCSCCBCHHHHHH
T ss_pred EEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchhhhhhhhcccccccccccccccccccccCcceeecHHHHHH
Confidence 9999999998876 5899999999999 877776654321111100 00000 1246677776
Q ss_pred ----HHHHCCCcEEEEEEeCCc
Q 019479 243 ----WFQKAGFKDVKLKRIGPK 260 (340)
Q Consensus 243 ----~l~~aGF~~v~~~~~~~~ 260 (340)
+.++.||.+ ++..++..
T Consensus 880 Wae~LAer~GYsV-efvGVGDg 900 (950)
T 3htx_A 880 WASKLGKRHNYSV-EFSGVGGS 900 (950)
T ss_dssp HHHHHHHHTTEEE-EEEEESSC
T ss_pred HHHHHHHhcCcEE-EEEccCCC
Confidence 667789975 56666543
No 120
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.64 E-value=1.7e-15 Score=128.84 Aligned_cols=121 Identities=15% Similarity=0.197 Sum_probs=98.6
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHh---CCCCCcEEEEcCCCCCCCCCCCccEEEecCccc
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKECTIIEGDAEDLPFPTDYADRYVSAGSIE 189 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~---~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~ 189 (340)
++.+|||+|||+|.++..+++.+|+.+++++|+|+.+++.++++ ....+++++++|+.+.+ +.++||+|+++.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~--- 140 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRA--- 140 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSC---
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEec---
Confidence 47899999999999999999988889999999999999999876 33356999999998765 457899999754
Q ss_pred ccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEe
Q 019479 190 YWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRI 257 (340)
Q Consensus 190 ~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~ 257 (340)
+.+...+++++.++|+|||++++.... ...+++.++++ ||+.++...+
T Consensus 141 -~~~~~~~l~~~~~~L~~gG~l~~~~~~-----------------~~~~~~~~~~~--g~~~~~~~~~ 188 (207)
T 1jsx_A 141 -FASLNDMVSWCHHLPGEQGRFYALKGQ-----------------MPEDEIALLPE--EYQVESVVKL 188 (207)
T ss_dssp -SSSHHHHHHHHTTSEEEEEEEEEEESS-----------------CCHHHHHTSCT--TEEEEEEEEE
T ss_pred -cCCHHHHHHHHHHhcCCCcEEEEEeCC-----------------CchHHHHHHhc--CCceeeeeee
Confidence 357789999999999999999887432 13455555554 9998876654
No 121
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.64 E-value=3.4e-15 Score=127.64 Aligned_cols=133 Identities=17% Similarity=0.085 Sum_probs=94.1
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC-CCCCcEEEEcCCCCC----CCCCCCccEEEecC
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE-PLKECTIIEGDAEDL----PFPTDYADRYVSAG 186 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~-~~~~i~~~~~d~~~~----~~~~~~fD~v~~~~ 186 (340)
+++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.+.+.. ...|+.++.+|+... ++. ++||+|++..
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~~ 134 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIV-EKVDLIYQDI 134 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTC-CCEEEEEECC
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccc-cceeEEEEec
Confidence 4788999999999999999999876679999999998765443321 125788899998763 333 7899999873
Q ss_pred cccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHH----HHHHHCCCcEEEEEEeCC
Q 019479 187 SIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYI----EWFQKAGFKDVKLKRIGP 259 (340)
Q Consensus 187 ~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~aGF~~v~~~~~~~ 259 (340)
.++ .+...+++++.++|||||++++...... .....+.+++. +.++++ |++++.....+
T Consensus 135 -~~~-~~~~~~l~~~~r~LkpgG~l~i~~~~~~-----------~~~~~~~~~~~~~~~~~l~~~-f~~~~~~~~~p 197 (210)
T 1nt2_A 135 -AQK-NQIEILKANAEFFLKEKGEVVIMVKARS-----------IDSTAEPEEVFKSVLKEMEGD-FKIVKHGSLMP 197 (210)
T ss_dssp -CST-THHHHHHHHHHHHEEEEEEEEEEEEHHH-----------HCTTSCHHHHHHHHHHHHHTT-SEEEEEEECTT
T ss_pred -cCh-hHHHHHHHHHHHHhCCCCEEEEEEecCC-----------ccccCCHHHHHHHHHHHHHhh-cEEeeeecCCC
Confidence 221 2233558999999999999998832110 00011333332 338888 99999888754
No 122
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.64 E-value=1.4e-15 Score=127.50 Aligned_cols=136 Identities=18% Similarity=0.259 Sum_probs=104.1
Q ss_pred HHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCCC--cEEEEcCCCCCCCCC
Q 019479 102 DEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKE--CTIIEGDAEDLPFPT 176 (340)
Q Consensus 102 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~~--i~~~~~d~~~~~~~~ 176 (340)
..++..+.. .++.+|||+|||+|.++..+++. +.+++++|+++.+++.++++. ...+ ++++.+|+.+ +..+
T Consensus 42 ~~l~~~~~~-~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~ 117 (194)
T 1dus_A 42 KILVENVVV-DKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE-NVKD 117 (194)
T ss_dssp HHHHHHCCC-CTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT-TCTT
T ss_pred HHHHHHccc-CCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc-cccc
Confidence 333444433 37789999999999999999888 789999999999999999773 3344 9999999977 3456
Q ss_pred CCccEEEecCcccc-cCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEE
Q 019479 177 DYADRYVSAGSIEY-WPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLK 255 (340)
Q Consensus 177 ~~fD~v~~~~~l~~-~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~ 255 (340)
++||+|+++..+++ ..+...+++++.++|||||++++..+.... .+++.+.+++. |..+++.
T Consensus 118 ~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~----------------~~~~~~~l~~~-~~~~~~~ 180 (194)
T 1dus_A 118 RKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTKQG----------------AKSLAKYMKDV-FGNVETV 180 (194)
T ss_dssp SCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEESTHH----------------HHHHHHHHHHH-HSCCEEE
T ss_pred CCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCCCC----------------hHHHHHHHHHH-hcceEEE
Confidence 78999999988886 355678999999999999999998765421 23456667666 5555554
Q ss_pred EeC
Q 019479 256 RIG 258 (340)
Q Consensus 256 ~~~ 258 (340)
...
T Consensus 181 ~~~ 183 (194)
T 1dus_A 181 TIK 183 (194)
T ss_dssp EEE
T ss_pred ecC
Confidence 443
No 123
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.64 E-value=5.9e-16 Score=136.00 Aligned_cols=140 Identities=16% Similarity=0.119 Sum_probs=103.0
Q ss_pred CCCEEEEEcCcc--chHHHHHHH-hCCCceEEEEeCCHHHHHHHHHhCCC---CCcEEEEcCCCCCC------CCCCCcc
Q 019479 113 RNMRVVDVGGGT--GFTTLGIVK-HVDAKNVTILDQSPHQLAKAKQKEPL---KECTIIEGDAEDLP------FPTDYAD 180 (340)
Q Consensus 113 ~~~~vLDiGcG~--G~~~~~l~~-~~~~~~v~g~D~s~~~~~~a~~~~~~---~~i~~~~~d~~~~~------~~~~~fD 180 (340)
...+|||||||+ +.++..+++ ..|+.+|+++|.|+.|++.|++++.. .+++|+++|+.+++ ...+.||
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccC
Confidence 447899999997 444555444 56889999999999999999988543 36899999997742 1124455
Q ss_pred -----EEEecCcccccCC---HHHHHHHHHHhcccCcEEEEEccCCCch-hHhhHhhhHh------hcCCCHHHHHHHHH
Q 019479 181 -----RYVSAGSIEYWPD---PQRGIKEAYRVLKIGGKACVIGPVYPTF-WLSRFFADVW------MLFPKEEEYIEWFQ 245 (340)
Q Consensus 181 -----~v~~~~~l~~~~d---~~~~l~~~~~~LkpgG~l~i~~~~~~~~-~~~~~~~~~~------~~~~~~~~~~~~l~ 245 (340)
.|+++.+|||++| +..+++++.+.|+|||+|++.+...+.. .....+...+ ..+++.+++..+|.
T Consensus 158 ~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~~~~g~p~~~rs~~ei~~~f~ 237 (277)
T 3giw_A 158 LTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREYAARNMPMRLRTHAEAEEFFE 237 (277)
T ss_dssp TTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHHHHHHHHHHTTCCCCCCCHHHHHHTTT
T ss_pred cCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHHHHHHHHHhcCCCCccCCHHHHHHHhC
Confidence 6889999999988 4689999999999999999987654321 1111111111 23679999999995
Q ss_pred HCCCcEEEE
Q 019479 246 KAGFKDVKL 254 (340)
Q Consensus 246 ~aGF~~v~~ 254 (340)
||+.++-
T Consensus 238 --GlelveP 244 (277)
T 3giw_A 238 --GLELVEP 244 (277)
T ss_dssp --TSEECTT
T ss_pred --CCcccCC
Confidence 9996553
No 124
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.63 E-value=3.9e-15 Score=123.70 Aligned_cols=132 Identities=24% Similarity=0.303 Sum_probs=105.6
Q ss_pred HHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCCCCC
Q 019479 98 EDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAEDLPF 174 (340)
Q Consensus 98 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~~~~ 174 (340)
..+...++..... .++.+|||+|||+|.++..+++ ++.+++|+|+++.+++.++++. ..++++++++|+.+ ++
T Consensus 21 ~~~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~ 96 (183)
T 2yxd_A 21 EEIRAVSIGKLNL-NKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VL 96 (183)
T ss_dssp HHHHHHHHHHHCC-CTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HG
T ss_pred HHHHHHHHHHcCC-CCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-cc
Confidence 4444555555443 4678999999999999999988 5889999999999999999873 33579999999976 55
Q ss_pred CCCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEE
Q 019479 175 PTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKL 254 (340)
Q Consensus 175 ~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~ 254 (340)
++++||+|++..+ .+...+++++.++ |||.+++...... +..++.+.++++||.+..+
T Consensus 97 ~~~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~~~~----------------~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 97 DKLEFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTIVLE----------------NAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp GGCCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEESCHH----------------HHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEecccc----------------cHHHHHHHHHHcCCeEEEE
Confidence 6678999999888 6778999999999 9999999875421 2466788999999876555
Q ss_pred E
Q 019479 255 K 255 (340)
Q Consensus 255 ~ 255 (340)
.
T Consensus 155 ~ 155 (183)
T 2yxd_A 155 N 155 (183)
T ss_dssp E
T ss_pred E
Confidence 4
No 125
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.63 E-value=1.2e-15 Score=135.41 Aligned_cols=134 Identities=19% Similarity=0.188 Sum_probs=102.7
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCccccc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEYW 191 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 191 (340)
.++.+|||||||+|.++..+++.+++.+|+|+|+|+.+++.|+++. .++.+..+|+.++++++++||+|++..+..
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~-- 159 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY--PQVTFCVASSHRLPFSDTSMDAIIRIYAPC-- 159 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC--TTSEEEECCTTSCSBCTTCEEEEEEESCCC--
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC--CCcEEEEcchhhCCCCCCceeEEEEeCChh--
Confidence 3678999999999999999999887889999999999999999875 578999999998888888999999876533
Q ss_pred CCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEeC
Q 019479 192 PDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 192 ~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~ 258 (340)
.++++.++|||||++++..+.....+... ...+....... ...+..+||++++...+.
T Consensus 160 -----~l~~~~~~L~pgG~l~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~gf~~~~~~~~~ 217 (269)
T 1p91_A 160 -----KAEELARVVKPGGWVITATPGPRHLMELK--GLIYNEVHLHA--PHAEQLEGFTLQQSAELC 217 (269)
T ss_dssp -----CHHHHHHHEEEEEEEEEEEECTTTTHHHH--TTTCSSCCCCC--CCCCCCTTEEEEEEEEEE
T ss_pred -----hHHHHHHhcCCCcEEEEEEcCHHHHHHHH--HHhhccccccc--chhhHhcCCcEEEEEEEE
Confidence 58999999999999999887654322111 11111110000 024557899998887764
No 126
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.62 E-value=9.6e-16 Score=138.50 Aligned_cols=136 Identities=21% Similarity=0.280 Sum_probs=104.2
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC-------CCCCcEEEEcCCCCCCC--CCCCccEE
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE-------PLKECTIIEGDAEDLPF--PTDYADRY 182 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~-------~~~~i~~~~~d~~~~~~--~~~~fD~v 182 (340)
+++.+|||||||+|..+..+++..+..+|+++|+++.+++.++++. ..++++++.+|+.+... .+++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 3578999999999999999998766789999999999999999875 24689999999976442 46789999
Q ss_pred EecCcccccCCH----HHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEeC
Q 019479 183 VSAGSIEYWPDP----QRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 183 ~~~~~l~~~~d~----~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~ 258 (340)
++....++.++. ..+++++.++|||||++++...... .. ....+++.+.++++||..++.....
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~---~~---------~~~~~~~~~~l~~~GF~~v~~~~~~ 241 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIW---LD---------LELIEKMSRFIRETGFASVQYALMH 241 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTT---TC---------HHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcc---cc---------hHHHHHHHHHHHhCCCCcEEEEEee
Confidence 997666554333 5889999999999999998754321 00 0135678889999999988887664
Q ss_pred C
Q 019479 259 P 259 (340)
Q Consensus 259 ~ 259 (340)
.
T Consensus 242 v 242 (304)
T 3bwc_A 242 V 242 (304)
T ss_dssp C
T ss_pred c
Confidence 3
No 127
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.62 E-value=3.6e-15 Score=131.68 Aligned_cols=129 Identities=19% Similarity=0.244 Sum_probs=103.0
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---C-CCCcEEEEcCCCCCC--CCCCCccEEEecC
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---P-LKECTIIEGDAEDLP--FPTDYADRYVSAG 186 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~-~~~i~~~~~d~~~~~--~~~~~fD~v~~~~ 186 (340)
++.+|||+|||+|.++..+++..+ .+|+|+|+++.+++.|+++. . ..+++++++|+.+.+ ++.++||+|+++-
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~-~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~np 127 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTK-AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNP 127 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCC-CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECC
T ss_pred CCCEEEEcCCchhHHHHHHHHhcC-CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECC
Confidence 678999999999999999999854 49999999999999999873 2 246999999998764 4578899999975
Q ss_pred ccccc--------------------CCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHH
Q 019479 187 SIEYW--------------------PDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQK 246 (340)
Q Consensus 187 ~l~~~--------------------~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 246 (340)
.+... .+...+++.+.++|||||+++++.+. ....++.+.+++
T Consensus 128 Py~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~-----------------~~~~~~~~~l~~ 190 (259)
T 3lpm_A 128 PYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP-----------------ERLLDIIDIMRK 190 (259)
T ss_dssp CC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT-----------------TTHHHHHHHHHH
T ss_pred CCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH-----------------HHHHHHHHHHHH
Confidence 55432 12347899999999999999986432 245678889999
Q ss_pred CCCcEEEEEEeCC
Q 019479 247 AGFKDVKLKRIGP 259 (340)
Q Consensus 247 aGF~~v~~~~~~~ 259 (340)
.||....+..+.+
T Consensus 191 ~~~~~~~~~~v~~ 203 (259)
T 3lpm_A 191 YRLEPKRIQFVHP 203 (259)
T ss_dssp TTEEEEEEEEEES
T ss_pred CCCceEEEEEeec
Confidence 9999988887754
No 128
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.62 E-value=5e-15 Score=130.19 Aligned_cols=111 Identities=14% Similarity=0.054 Sum_probs=84.6
Q ss_pred HHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCC--CCCCCCCc
Q 019479 102 DEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAED--LPFPTDYA 179 (340)
Q Consensus 102 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~--~~~~~~~f 179 (340)
..++..+.. .++.+|||||||+|.++..++++ +.+|+|+|+|+.|++.|+++.....+.....++.. ....+++|
T Consensus 35 ~~il~~l~l-~~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~f 111 (261)
T 3iv6_A 35 ENDIFLENI-VPGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHF 111 (261)
T ss_dssp HHHHHTTTC-CTTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCC
T ss_pred HHHHHhcCC-CCcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCc
Confidence 334444443 47889999999999999999997 78999999999999999998654433333333221 11125689
Q ss_pred cEEEecCcccccCC--HHHHHHHHHHhcccCcEEEEEcc
Q 019479 180 DRYVSAGSIEYWPD--PQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 180 D~v~~~~~l~~~~d--~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
|+|+++.+++|+.. ...+++++.++| |||++++...
T Consensus 112 D~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 112 DFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred cEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 99999999999854 357999999999 9999998753
No 129
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.62 E-value=2.9e-15 Score=132.77 Aligned_cols=102 Identities=14% Similarity=0.101 Sum_probs=84.7
Q ss_pred CCCEEEEEcCccch----HHHHHHHhCC----CceEEEEeCCHHHHHHHHHhC---------------------C---C-
Q 019479 113 RNMRVVDVGGGTGF----TTLGIVKHVD----AKNVTILDQSPHQLAKAKQKE---------------------P---L- 159 (340)
Q Consensus 113 ~~~~vLDiGcG~G~----~~~~l~~~~~----~~~v~g~D~s~~~~~~a~~~~---------------------~---~- 159 (340)
++.+|||+|||+|. .++.+++..+ +.+|+|+|+|+.+++.|++.. . .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 5666666644 469999999999999999752 0 0
Q ss_pred ---------CCcEEEEcCCCCCCCC-CCCccEEEecCcccccCCH--HHHHHHHHHhcccCcEEEEE
Q 019479 160 ---------KECTIIEGDAEDLPFP-TDYADRYVSAGSIEYWPDP--QRGIKEAYRVLKIGGKACVI 214 (340)
Q Consensus 160 ---------~~i~~~~~d~~~~~~~-~~~fD~v~~~~~l~~~~d~--~~~l~~~~~~LkpgG~l~i~ 214 (340)
.++.|.++|+.+.+++ .++||+|+|.++++|+++. .+++++++++|||||+|++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 2589999999875554 5689999999999999766 68999999999999999874
No 130
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.62 E-value=2.7e-15 Score=132.02 Aligned_cols=136 Identities=18% Similarity=0.129 Sum_probs=109.9
Q ss_pred HHhccccCCCCCCCEEEEEcCccchHHHHHHHh-CCCceEEEEeCCHHHHHHHHHhC---CC-CCcEEEEcCCCCCCCCC
Q 019479 102 DEALEPADLFDRNMRVVDVGGGTGFTTLGIVKH-VDAKNVTILDQSPHQLAKAKQKE---PL-KECTIIEGDAEDLPFPT 176 (340)
Q Consensus 102 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~---~~-~~i~~~~~d~~~~~~~~ 176 (340)
..++..... .++.+|||+|||+|.++..+++. .|+.+|+++|+++.+++.|+++. .. ++++++++|+.+. +++
T Consensus 83 ~~i~~~~~~-~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~ 160 (255)
T 3mb5_A 83 ALIVAYAGI-SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IEE 160 (255)
T ss_dssp HHHHHHTTC-CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CCC
T ss_pred HHHHHhhCC-CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cCC
Confidence 344444443 47889999999999999999998 56899999999999999999873 22 3499999999864 567
Q ss_pred CCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCC--CcEEEE
Q 019479 177 DYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAG--FKDVKL 254 (340)
Q Consensus 177 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG--F~~v~~ 254 (340)
++||+|++ +.+++..+++++.++|||||++++..+... ..+++.+.++++| |..+++
T Consensus 161 ~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~----------------~~~~~~~~l~~~g~~f~~~~~ 219 (255)
T 3mb5_A 161 ENVDHVIL-----DLPQPERVVEHAAKALKPGGFFVAYTPCSN----------------QVMRLHEKLREFKDYFMKPRT 219 (255)
T ss_dssp CSEEEEEE-----CSSCGGGGHHHHHHHEEEEEEEEEEESSHH----------------HHHHHHHHHHHTGGGBSCCEE
T ss_pred CCcCEEEE-----CCCCHHHHHHHHHHHcCCCCEEEEEECCHH----------------HHHHHHHHHHHcCCCccccEE
Confidence 78999998 466778899999999999999998865421 2456778999999 999888
Q ss_pred EEeCCc
Q 019479 255 KRIGPK 260 (340)
Q Consensus 255 ~~~~~~ 260 (340)
.+...+
T Consensus 220 ~e~~~r 225 (255)
T 3mb5_A 220 INVLVF 225 (255)
T ss_dssp ECCCCC
T ss_pred EEEeee
Confidence 776543
No 131
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.62 E-value=3.4e-15 Score=124.94 Aligned_cols=132 Identities=27% Similarity=0.338 Sum_probs=103.2
Q ss_pred hHHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CC-CCcEEEEcCCCCC
Q 019479 97 TEDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PL-KECTIIEGDAEDL 172 (340)
Q Consensus 97 ~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~-~~i~~~~~d~~~~ 172 (340)
...+...++..... .++.+|||+|||+|.++..+++.. .+|+++|+++.+++.++++. .. .++++.++|+.+
T Consensus 18 ~~~~~~~~~~~~~~-~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~- 93 (192)
T 1l3i_A 18 AMEVRCLIMCLAEP-GKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE- 93 (192)
T ss_dssp CHHHHHHHHHHHCC-CTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-
T ss_pred hHHHHHHHHHhcCC-CCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-
Confidence 34444555554443 478899999999999999999884 89999999999999999762 22 578999999865
Q ss_pred CCCC-CCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcE
Q 019479 173 PFPT-DYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKD 251 (340)
Q Consensus 173 ~~~~-~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~ 251 (340)
+++. ++||+|++..+++ +...+++++.++|+|||++++...... +..++.+.+++.||.+
T Consensus 94 ~~~~~~~~D~v~~~~~~~---~~~~~l~~~~~~l~~gG~l~~~~~~~~----------------~~~~~~~~l~~~g~~~ 154 (192)
T 1l3i_A 94 ALCKIPDIDIAVVGGSGG---ELQEILRIIKDKLKPGGRIIVTAILLE----------------TKFEAMECLRDLGFDV 154 (192)
T ss_dssp HHTTSCCEEEEEESCCTT---CHHHHHHHHHHTEEEEEEEEEEECBHH----------------HHHHHHHHHHHTTCCC
T ss_pred hcccCCCCCEEEECCchH---HHHHHHHHHHHhcCCCcEEEEEecCcc----------------hHHHHHHHHHHCCCce
Confidence 2232 5799999988765 457899999999999999998865321 2467788999999953
No 132
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.61 E-value=1.3e-15 Score=127.98 Aligned_cols=105 Identities=16% Similarity=0.113 Sum_probs=88.5
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCCCC--CCCCCccEEEecCc
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAEDLP--FPTDYADRYVSAGS 187 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~~~--~~~~~fD~v~~~~~ 187 (340)
++.+|||+|||+|.++..++.. +..+|+|+|+|+.+++.|+++. ..++++++++|+.+++ +++++||+|+++..
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p 122 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPP 122 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCC
T ss_pred CCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCC
Confidence 6789999999999999988776 4568999999999999999873 2357999999997653 34678999999988
Q ss_pred cccc-CCHHHHHHHHHH--hcccCcEEEEEccCC
Q 019479 188 IEYW-PDPQRGIKEAYR--VLKIGGKACVIGPVY 218 (340)
Q Consensus 188 l~~~-~d~~~~l~~~~~--~LkpgG~l~i~~~~~ 218 (340)
+++. .+...+++++.+ +|||||++++.....
T Consensus 123 ~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 123 YNVDSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp TTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred CCcchhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 7775 667789999999 999999999986543
No 133
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.61 E-value=8.8e-16 Score=141.41 Aligned_cols=119 Identities=18% Similarity=0.274 Sum_probs=96.0
Q ss_pred HHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC------------CCCCcEEEE
Q 019479 99 DMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE------------PLKECTIIE 166 (340)
Q Consensus 99 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~------------~~~~i~~~~ 166 (340)
.....++..+.. .++.+|||||||+|..+..++...+..+|+|+|+++.+++.|++.. ...+++|++
T Consensus 160 ~~i~~il~~l~l-~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~ 238 (438)
T 3uwp_A 160 DLVAQMIDEIKM-TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLER 238 (438)
T ss_dssp HHHHHHHHHHCC-CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEE
T ss_pred HHHHHHHHhcCC-CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEE
Confidence 445555555554 4789999999999999999998876567999999999999987631 136799999
Q ss_pred cCCCCCCCCC--CCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCC
Q 019479 167 GDAEDLPFPT--DYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYP 219 (340)
Q Consensus 167 ~d~~~~~~~~--~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~ 219 (340)
+|+.++++.+ ..||+|+++..+ +.++....|++++++|||||+|++.+...+
T Consensus 239 GD~~~lp~~d~~~~aDVVf~Nn~~-F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 239 GDFLSEEWRERIANTSVIFVNNFA-FGPEVDHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp CCTTSHHHHHHHHTCSEEEECCTT-CCHHHHHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred CcccCCccccccCCccEEEEcccc-cCchHHHHHHHHHHcCCCCcEEEEeecccC
Confidence 9998877643 469999998776 456778899999999999999999876554
No 134
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.61 E-value=5.3e-16 Score=136.56 Aligned_cols=158 Identities=10% Similarity=0.040 Sum_probs=103.9
Q ss_pred HHHHHhccccCCC-CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CC-CCcEEEEcCCCCC-
Q 019479 99 DMRDEALEPADLF-DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PL-KECTIIEGDAEDL- 172 (340)
Q Consensus 99 ~~~~~~l~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~-~~i~~~~~d~~~~- 172 (340)
.+...++...... .++.+|||+|||+|.++..+++..++.+|+|+|+|+.+++.|+++. .. .+++++++|+.+.
T Consensus 50 ~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 129 (254)
T 2h00_A 50 HWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLL 129 (254)
T ss_dssp HHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSS
T ss_pred HHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhh
Confidence 3444444433221 2577999999999999999998877789999999999999999873 22 3599999997652
Q ss_pred --CCC---CCCccEEEecCcccccC---------------CHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhH-h
Q 019479 173 --PFP---TDYADRYVSAGSIEYWP---------------DPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADV-W 231 (340)
Q Consensus 173 --~~~---~~~fD~v~~~~~l~~~~---------------d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~-~ 231 (340)
+++ +++||+|+++..+++.. ....++.+++++|||||.+.+....... ........ +
T Consensus 130 ~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~--~~~~l~~~g~ 207 (254)
T 2h00_A 130 MDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHD--SLQLKKRLRW 207 (254)
T ss_dssp TTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHH--HHHHGGGBSC
T ss_pred hhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHH--HHhcccceEE
Confidence 344 25899999986665433 1124567889999999998766431110 00111100 0
Q ss_pred -----hcCCCHHHHHHHHHHCCCcEEEEEEeC
Q 019479 232 -----MLFPKEEEYIEWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 232 -----~~~~~~~~~~~~l~~aGF~~v~~~~~~ 258 (340)
....+.+++.++++++||+.+++..+.
T Consensus 208 ~~~~~~~~~~~~~~~~~l~~~Gf~~v~~~~~~ 239 (254)
T 2h00_A 208 YSCMLGKKCSLAPLKEELRIQGVPKVTYTEFC 239 (254)
T ss_dssp EEEEESSTTSHHHHHHHHHHTTCSEEEEEEEE
T ss_pred EEECCCChhHHHHHHHHHHHcCCCceEEEEEe
Confidence 012345889999999999998887763
No 135
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.61 E-value=6.8e-16 Score=130.38 Aligned_cols=139 Identities=16% Similarity=0.106 Sum_probs=100.7
Q ss_pred CCCCEEEEEcCccchHHHHHHHhC-CCceEEEEeCCHHHHHHHHHhCC----CCCcEEEEcCCCCCC-CCCCCccEEEec
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEP----LKECTIIEGDAEDLP-FPTDYADRYVSA 185 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~----~~~i~~~~~d~~~~~-~~~~~fD~v~~~ 185 (340)
+++.+|||+|||+|.++..+++.+ +..+|+|+|+++.+++.|+++.. .++++++++|+.+++ ..+++||+|+++
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 100 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFN 100 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEc
Confidence 467899999999999999999986 45799999999999999998732 257999999997765 556789999987
Q ss_pred Ccccc---------cCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEE
Q 019479 186 GSIEY---------WPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKR 256 (340)
Q Consensus 186 ~~l~~---------~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~ 256 (340)
..+.. ..+...+++++.++|||||++++............. ....++.+.+...+|++.....
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~v~~~~~ 172 (197)
T 3eey_A 101 LGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEK--------EKVLEFLKGVDQKKFIVQRTDF 172 (197)
T ss_dssp ESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHH--------HHHHHHHTTSCTTTEEEEEEEE
T ss_pred CCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHH--------HHHHHHHHhCCCCcEEEEEEEe
Confidence 65511 113357999999999999999988643321110000 0122333344556788877766
Q ss_pred eC
Q 019479 257 IG 258 (340)
Q Consensus 257 ~~ 258 (340)
+.
T Consensus 173 ~~ 174 (197)
T 3eey_A 173 IN 174 (197)
T ss_dssp TT
T ss_pred cc
Confidence 54
No 136
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.61 E-value=1.4e-15 Score=130.79 Aligned_cols=104 Identities=12% Similarity=0.095 Sum_probs=86.9
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHh---CCCCCcEEEEcCCCCC-C--CCCCCccEEEecC
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKECTIIEGDAEDL-P--FPTDYADRYVSAG 186 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~---~~~~~i~~~~~d~~~~-~--~~~~~fD~v~~~~ 186 (340)
.+.+|||||||+|.++..+++..|+..|+|+|+|+.+++.|+++ ....|++++++|+.++ + +++++||.|++..
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 56799999999999999999999899999999999999999876 3446899999998763 3 6788999999875
Q ss_pred cccccCCH--------HHHHHHHHHhcccCcEEEEEcc
Q 019479 187 SIEYWPDP--------QRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 187 ~l~~~~d~--------~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
...+.... ..+++++.++|||||++++...
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 44433222 2599999999999999988764
No 137
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.61 E-value=2.7e-15 Score=130.31 Aligned_cols=138 Identities=15% Similarity=0.077 Sum_probs=97.1
Q ss_pred CCCCEEEEEcCccchHHHHHHHhC-CCceEEEEeCCHHHHHHHHHhCC-CCCcEEEEcCCCC---CCCCCCCccEEEecC
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEP-LKECTIIEGDAED---LPFPTDYADRYVSAG 186 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~-~~~i~~~~~d~~~---~~~~~~~fD~v~~~~ 186 (340)
.++.+|||+|||+|.++..+++.+ |..+|+|+|+|+.+++.+.++.. ..+++++++|+.+ +++.+++||+|++..
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~ 155 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADV 155 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEECC
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEcC
Confidence 468899999999999999999986 56899999999876655544321 1689999999977 344567899999854
Q ss_pred cccccCCH-HHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEeCC
Q 019479 187 SIEYWPDP-QRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRIGP 259 (340)
Q Consensus 187 ~l~~~~d~-~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~ 259 (340)
. .++. ..++.++.++|||||++++........ ........ + .++ .++|+++||++++...+.+
T Consensus 156 ~---~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~-~~~~~~~~----~-~~~-~~~l~~~Gf~~~~~~~~~~ 219 (233)
T 2ipx_A 156 A---QPDQTRIVALNAHTFLRNGGHFVISIKANCID-STASAEAV----F-ASE-VKKMQQENMKPQEQLTLEP 219 (233)
T ss_dssp C---CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHC-SSSCHHHH----H-HHH-HHTTGGGTEEEEEEEECTT
T ss_pred C---CccHHHHHHHHHHHHcCCCeEEEEEEcccccc-cCCCHHHH----H-HHH-HHHHHHCCCceEEEEecCC
Confidence 4 2233 456889999999999999853210000 00000000 0 122 5889999999998777653
No 138
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.60 E-value=1.6e-15 Score=134.90 Aligned_cols=149 Identities=17% Similarity=0.115 Sum_probs=99.6
Q ss_pred HhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEE-EEcCCCCCC---CCCCC
Q 019479 103 EALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTI-IEGDAEDLP---FPTDY 178 (340)
Q Consensus 103 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~-~~~d~~~~~---~~~~~ 178 (340)
.++.......++.+|||||||||.++..+++. +..+|+|+|+|+.|++.+.+.. +++.. ...|+..+. ++..+
T Consensus 75 ~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~~--~rv~~~~~~ni~~l~~~~l~~~~ 151 (291)
T 3hp7_A 75 KALAVFNLSVEDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQD--DRVRSMEQYNFRYAEPVDFTEGL 151 (291)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHTC--TTEEEECSCCGGGCCGGGCTTCC
T ss_pred HHHHhcCCCccccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhC--cccceecccCceecchhhCCCCC
Confidence 33444444346889999999999999999887 4569999999999999865431 23322 223443332 23456
Q ss_pred ccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEc-cCCC--chhHhh--HhhhHhhcCCCHHHHHHHHHHCCCcEEE
Q 019479 179 ADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIG-PVYP--TFWLSR--FFADVWMLFPKEEEYIEWFQKAGFKDVK 253 (340)
Q Consensus 179 fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~-~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~l~~aGF~~v~ 253 (340)
||+|++..+++++ ..+|.++.++|||||++++.. +... ...... ...+........+++.++++++||.+..
T Consensus 152 fD~v~~d~sf~sl---~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~ 228 (291)
T 3hp7_A 152 PSFASIDVSFISL---NLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKG 228 (291)
T ss_dssp CSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEE
T ss_pred CCEEEEEeeHhhH---HHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 9999998887754 689999999999999998862 1111 111000 0011111123578899999999999887
Q ss_pred EEEe
Q 019479 254 LKRI 257 (340)
Q Consensus 254 ~~~~ 257 (340)
+..-
T Consensus 229 ~~~s 232 (291)
T 3hp7_A 229 LDFS 232 (291)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 7664
No 139
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.60 E-value=3.5e-15 Score=129.80 Aligned_cols=105 Identities=14% Similarity=0.151 Sum_probs=84.3
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHh---------CCCCCcEEEEcCCCC-CC--CCCCCc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---------EPLKECTIIEGDAED-LP--FPTDYA 179 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~---------~~~~~i~~~~~d~~~-~~--~~~~~f 179 (340)
.++.+|||||||+|.++..+++.+|+..|+|+|+|+.+++.|+++ ....|++++++|+.+ ++ +++++|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 356789999999999999999998889999999999999998754 234689999999986 55 678899
Q ss_pred cEEEecCcccccCC--------HHHHHHHHHHhcccCcEEEEEcc
Q 019479 180 DRYVSAGSIEYWPD--------PQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 180 D~v~~~~~l~~~~d--------~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
|.|++...-.+... ...+++++.++|||||.|++...
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 99987543322211 13699999999999999998754
No 140
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.60 E-value=2.1e-15 Score=132.77 Aligned_cols=125 Identities=22% Similarity=0.237 Sum_probs=101.3
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCC--cEEEEcCCCCCCCCCCCccEEEecCccc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKE--CTIIEGDAEDLPFPTDYADRYVSAGSIE 189 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~--i~~~~~d~~~~~~~~~~fD~v~~~~~l~ 189 (340)
.++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.++++....+ +++.++|+.+. +++++||+|+++...+
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~--g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~-~~~~~fD~Vv~n~~~~ 195 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKL--GGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA-LPFGPFDLLVANLYAE 195 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH-GGGCCEEEEEEECCHH
T ss_pred CCCCEEEEecCCCcHHHHHHHHh--CCeEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc-CcCCCCCEEEECCcHH
Confidence 46889999999999999998887 4499999999999999998732211 88999998652 3467899999976554
Q ss_pred ccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEeC
Q 019479 190 YWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 190 ~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~ 258 (340)
+ ...+++++.++|||||++++.+.... +.+++.+.++++||+++++...+
T Consensus 196 ~---~~~~l~~~~~~LkpgG~lils~~~~~----------------~~~~v~~~l~~~Gf~~~~~~~~~ 245 (254)
T 2nxc_A 196 L---HAALAPRYREALVPGGRALLTGILKD----------------RAPLVREAMAGAGFRPLEEAAEG 245 (254)
T ss_dssp H---HHHHHHHHHHHEEEEEEEEEEEEEGG----------------GHHHHHHHHHHTTCEEEEEEEET
T ss_pred H---HHHHHHHHHHHcCCCCEEEEEeeccC----------------CHHHHHHHHHHCCCEEEEEeccC
Confidence 3 45789999999999999999764321 36788999999999998887754
No 141
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.59 E-value=3.8e-16 Score=135.56 Aligned_cols=145 Identities=21% Similarity=0.113 Sum_probs=93.7
Q ss_pred HhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC------CCcEEEE-cCCCCCCCC
Q 019479 103 EALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL------KECTIIE-GDAEDLPFP 175 (340)
Q Consensus 103 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~------~~i~~~~-~d~~~~~~~ 175 (340)
.++.......++.+|||||||+|.++..+++. +..+|+|+|+|+.|++.++++... .++.+.. .|+..
T Consensus 27 ~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~---- 101 (232)
T 3opn_A 27 KALKEFHLEINGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ---- 101 (232)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS----
T ss_pred HHHHHcCCCCCCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc----
Confidence 33444444446789999999999999999988 335999999999999998875321 1222222 22221
Q ss_pred CCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhh-Hh------hhHhhcCCCHHHHHHHHHHCC
Q 019479 176 TDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSR-FF------ADVWMLFPKEEEYIEWFQKAG 248 (340)
Q Consensus 176 ~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~~~l~~aG 248 (340)
..||.+.+..++.++ ..+++++.++|||||++++.. .+...... .. .+......+.+++.++++++|
T Consensus 102 -~~~d~~~~D~v~~~l---~~~l~~i~rvLkpgG~lv~~~--~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aG 175 (232)
T 3opn_A 102 -GRPSFTSIDVSFISL---DLILPPLYEILEKNGEVAALI--KPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLG 175 (232)
T ss_dssp -CCCSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEEE--CHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred -CCCCEEEEEEEhhhH---HHHHHHHHHhccCCCEEEEEE--CcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCC
Confidence 124544444444433 679999999999999998863 11111000 00 011111236789999999999
Q ss_pred CcEEEEEEeC
Q 019479 249 FKDVKLKRIG 258 (340)
Q Consensus 249 F~~v~~~~~~ 258 (340)
|+++.+....
T Consensus 176 f~v~~~~~~p 185 (232)
T 3opn_A 176 FSVKGLTFSP 185 (232)
T ss_dssp EEEEEEEECS
T ss_pred CEEEEEEEcc
Confidence 9988877653
No 142
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.59 E-value=1.2e-14 Score=135.08 Aligned_cols=135 Identities=15% Similarity=0.205 Sum_probs=101.9
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC--CCcEEEEcCCCCCCCCCCCccEEEecCcccc
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL--KECTIIEGDAEDLPFPTDYADRYVSAGSIEY 190 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~--~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 190 (340)
++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.++++... .+++++++|+.+.+..+++||+|+++..+|+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHV 310 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCT
T ss_pred CCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhh
Confidence 6789999999999999999998 67999999999999999987432 2489999999887666688999999999887
Q ss_pred -----cCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEeC
Q 019479 191 -----WPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 191 -----~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~ 258 (340)
..+...+++++.++|||||+++++....... ...+..... ++..+ ++.||++++.....
T Consensus 311 ~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~--~~~l~~~f~------~v~~l-~~~gF~Vl~a~~~~ 374 (381)
T 3dmg_A 311 GGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKY--EPLLEEKFG------AFQTL-KVAEYKVLFAEKRG 374 (381)
T ss_dssp TCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTSCH--HHHHHHHHS------CCEEE-EESSSEEEEEECC-
T ss_pred cccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCCh--HHHHHHhhc------cEEEE-eCCCEEEEEEEEec
Confidence 4455689999999999999999985443221 111111111 11122 66788887776654
No 143
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.59 E-value=1.7e-14 Score=127.37 Aligned_cols=130 Identities=19% Similarity=0.279 Sum_probs=101.9
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC-------CCcEEEEcCCCCC-------CCCCC
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-------KECTIIEGDAEDL-------PFPTD 177 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~-------~~i~~~~~d~~~~-------~~~~~ 177 (340)
.++.+|||+|||+|.++..++++.|+.+|+|+|+++.+++.|+++... ++++++++|+.+. .++++
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 367899999999999999999998889999999999999999988654 2589999999876 24577
Q ss_pred CccEEEecCccccc------------------CCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHH
Q 019479 178 YADRYVSAGSIEYW------------------PDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEE 239 (340)
Q Consensus 178 ~fD~v~~~~~l~~~------------------~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (340)
+||+|+++-.+... .+...+++.+.++|||||++++..+.. ...+
T Consensus 115 ~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-----------------~~~~ 177 (260)
T 2ozv_A 115 HFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQ-----------------SVAE 177 (260)
T ss_dssp CEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGG-----------------GHHH
T ss_pred CcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHH-----------------HHHH
Confidence 89999998443322 235688999999999999998874321 2345
Q ss_pred HHHHHHHCCCcEEEEEEeCC
Q 019479 240 YIEWFQKAGFKDVKLKRIGP 259 (340)
Q Consensus 240 ~~~~l~~aGF~~v~~~~~~~ 259 (340)
+.+.+++. |..+++..+..
T Consensus 178 ~~~~l~~~-~~~~~i~~v~~ 196 (260)
T 2ozv_A 178 IIAACGSR-FGGLEITLIHP 196 (260)
T ss_dssp HHHHHTTT-EEEEEEEEEES
T ss_pred HHHHHHhc-CCceEEEEEcC
Confidence 66777765 88777776543
No 144
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.58 E-value=2e-15 Score=138.74 Aligned_cols=133 Identities=18% Similarity=0.128 Sum_probs=98.9
Q ss_pred HhhhhhhhhhhhhcccCC-CCchHHHHHHhccccCCCCCCCEEEEEcCc------cchHHHHHHHh-CCCceEEEEeCCH
Q 019479 76 AFWFYRFLSIVYDHVINP-GHWTEDMRDEALEPADLFDRNMRVVDVGGG------TGFTTLGIVKH-VDAKNVTILDQSP 147 (340)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG------~G~~~~~l~~~-~~~~~v~g~D~s~ 147 (340)
.+..|+..+..|...-.. .++.....+.++.... .++.+||||||| +|..+..+++. +|+.+|+|+|+|+
T Consensus 180 ~~~~fd~lA~~Y~tDK~~~~h~y~~~Ye~lL~~l~--~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp 257 (419)
T 3sso_A 180 RKPDLSELSSRYFTPKFGFLHWFTPHYDRHFRDYR--NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMD 257 (419)
T ss_dssp CCCCHHHHHHHTTCTTBSSSCBCHHHHHHHHGGGT--TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSC
T ss_pred CCccHHHHHHHhCCCcccccchHHHHHHHHHHhhc--CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCH
Confidence 344566667777532221 2223344455554443 367899999999 77777777765 5889999999999
Q ss_pred HHHHHHHHhCCCCCcEEEEcCCCCCCCC------CCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccC
Q 019479 148 HQLAKAKQKEPLKECTIIEGDAEDLPFP------TDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 148 ~~~~~a~~~~~~~~i~~~~~d~~~~~~~------~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
.|. ...++++++++|+.++++. +++||+|++.. .|++.+....|++++++|||||++++.+..
T Consensus 258 ~m~------~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 258 KSH------VDELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDG-SHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp CGG------GCBTTEEEEECCTTCHHHHHHHHHHHCCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred HHh------hcCCCcEEEEecccccchhhhhhcccCCccEEEECC-cccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 983 1347899999999987766 68899999864 577778889999999999999999998754
No 145
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.58 E-value=3.1e-14 Score=126.86 Aligned_cols=125 Identities=20% Similarity=0.242 Sum_probs=103.2
Q ss_pred CCCCEEEEEcCccchHHHHHHHh-CCCceEEEEeCCHHHHHHHHHhC---CC-CCcEEEEcCCCCCCCCCCCccEEEecC
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKH-VDAKNVTILDQSPHQLAKAKQKE---PL-KECTIIEGDAEDLPFPTDYADRYVSAG 186 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~---~~-~~i~~~~~d~~~~~~~~~~fD~v~~~~ 186 (340)
.++.+|||+|||+|.++..+++. .|+.+|+++|+++.+++.|+++. .. ++++++.+|+.+. +++++||+|++
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~-- 187 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEKDVDALFL-- 187 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCCSEEEEEE--
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCCccCEEEE--
Confidence 46889999999999999999998 46789999999999999999873 22 5789999999775 56678999998
Q ss_pred cccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEeC
Q 019479 187 SIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 187 ~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~ 258 (340)
+.+++..+++++.++|+|||++++..+... ...++.+.++++||..+++...-
T Consensus 188 ---~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~----------------~~~~~~~~l~~~gf~~~~~~~~~ 240 (277)
T 1o54_A 188 ---DVPDPWNYIDKCWEALKGGGRFATVCPTTN----------------QVQETLKKLQELPFIRIEVWESL 240 (277)
T ss_dssp ---CCSCGGGTHHHHHHHEEEEEEEEEEESSHH----------------HHHHHHHHHHHSSEEEEEEECCC
T ss_pred ---CCcCHHHHHHHHHHHcCCCCEEEEEeCCHH----------------HHHHHHHHHHHCCCceeEEEEEe
Confidence 456778899999999999999999875321 23566778889999988877653
No 146
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.58 E-value=5.8e-14 Score=121.26 Aligned_cols=138 Identities=13% Similarity=0.079 Sum_probs=95.2
Q ss_pred CCCCEEEEEcCccchHHHHHHHhC-CCceEEEEeCCHHHHHHHHHhC-CCCCcEEEEcCCCCCC---CCCCCccEEEecC
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKE-PLKECTIIEGDAEDLP---FPTDYADRYVSAG 186 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~-~~~~i~~~~~d~~~~~---~~~~~fD~v~~~~ 186 (340)
+++.+|||+|||+|.++..+++.. +.++|+|+|+|+.+++...+.. ...|+.++++|+.... ...++||+|++..
T Consensus 75 ~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~ 154 (232)
T 3id6_C 75 RKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDI 154 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEECC
T ss_pred CCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEecC
Confidence 578999999999999999999875 4679999999998854332111 1268999999997532 1246899999875
Q ss_pred cccccCCHHHHH-HHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEeCC
Q 019479 187 SIEYWPDPQRGI-KEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRIGP 259 (340)
Q Consensus 187 ~l~~~~d~~~~l-~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~ 259 (340)
.. ++...++ ..+.+.|||||++++....... ..........++..+.|+++||++++...+.+
T Consensus 155 a~---~~~~~il~~~~~~~LkpGG~lvisik~~~~-------d~t~~~~e~~~~~~~~L~~~gf~~~~~~~l~p 218 (232)
T 3id6_C 155 AQ---PDQTDIAIYNAKFFLKVNGDMLLVIKARSI-------DVTKDPKEIYKTEVEKLENSNFETIQIINLDP 218 (232)
T ss_dssp CC---TTHHHHHHHHHHHHEEEEEEEEEEEC--------------CCSSSSTTHHHHHHHHTTEEEEEEEECTT
T ss_pred CC---hhHHHHHHHHHHHhCCCCeEEEEEEccCCc-------ccCCCHHHHHHHHHHHHHHCCCEEEEEeccCC
Confidence 43 4555555 4556699999999987422110 00000111224556788899999999888754
No 147
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.58 E-value=7.2e-15 Score=121.19 Aligned_cols=120 Identities=21% Similarity=0.220 Sum_probs=96.6
Q ss_pred CCCCCEEEEEcCccchHHHHHHHhC-CCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC--------CCCCCccE
Q 019479 111 FDRNMRVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP--------FPTDYADR 181 (340)
Q Consensus 111 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~--------~~~~~fD~ 181 (340)
..++.+|||+|||+|.++..+++.+ ++.+++++|+++ +++. .+++++++|+.+.+ +++++||+
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~ 91 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-------VGVDFLQGDFRDELVMKALLERVGDSKVQV 91 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-------TTEEEEESCTTSHHHHHHHHHHHTTCCEEE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-------CcEEEEEcccccchhhhhhhccCCCCceeE
Confidence 3578899999999999999999985 568999999998 6532 67899999998765 66788999
Q ss_pred EEecCcccccCCH-----------HHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCc
Q 019479 182 YVSAGSIEYWPDP-----------QRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFK 250 (340)
Q Consensus 182 v~~~~~l~~~~d~-----------~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~ 250 (340)
|+++..+++..+. ..+++++.++|+|||.+++..+... ...++.+.+++. |.
T Consensus 92 i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~----------------~~~~~~~~~~~~-~~ 154 (180)
T 1ej0_A 92 VMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGE----------------GFDEYLREIRSL-FT 154 (180)
T ss_dssp EEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESST----------------THHHHHHHHHHH-EE
T ss_pred EEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCC----------------cHHHHHHHHHHh-hh
Confidence 9999998888776 6889999999999999998765433 234555666663 77
Q ss_pred EEEEE
Q 019479 251 DVKLK 255 (340)
Q Consensus 251 ~v~~~ 255 (340)
.+++.
T Consensus 155 ~~~~~ 159 (180)
T 1ej0_A 155 KVKVR 159 (180)
T ss_dssp EEEEE
T ss_pred hEEee
Confidence 66654
No 148
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.58 E-value=1.5e-14 Score=123.36 Aligned_cols=109 Identities=17% Similarity=0.172 Sum_probs=91.4
Q ss_pred HHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCCCCCCC
Q 019479 100 MRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAEDLPFPT 176 (340)
Q Consensus 100 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~~~~~~ 176 (340)
....++..+.. .++.+|||+|||+|.++..+++. +.+|+++|+++.+++.++++. ...+++++.+|+.+.+..+
T Consensus 65 ~~~~~~~~l~~-~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 141 (210)
T 3lbf_A 65 MVARMTELLEL-TPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQAR 141 (210)
T ss_dssp HHHHHHHHTTC-CTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGG
T ss_pred HHHHHHHhcCC-CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccC
Confidence 34444444443 47889999999999999999998 789999999999999999873 3457999999998766567
Q ss_pred CCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccC
Q 019479 177 DYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 177 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
++||+|++..+++++.+ ++.+.|||||++++....
T Consensus 142 ~~~D~i~~~~~~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 142 APFDAIIVTAAPPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CCEEEEEESSBCSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred CCccEEEEccchhhhhH------HHHHhcccCcEEEEEEcC
Confidence 88999999999999875 689999999999998654
No 149
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.57 E-value=1.6e-14 Score=128.94 Aligned_cols=126 Identities=19% Similarity=0.160 Sum_probs=99.9
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CC-CCcEEEEcCCCCCCCCCCCccEEEecCc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PL-KECTIIEGDAEDLPFPTDYADRYVSAGS 187 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~-~~i~~~~~d~~~~~~~~~~fD~v~~~~~ 187 (340)
+++.+|||+|||+|.++..+++..+. +|+|+|+|+.+++.|+++. .. .+++++++|+.+++. +++||+|++...
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p 201 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV 201 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC
T ss_pred CCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc
Confidence 46899999999999999999998433 7999999999999999763 22 348899999988765 678999998643
Q ss_pred ccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEE
Q 019479 188 IEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVK 253 (340)
Q Consensus 188 l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~ 253 (340)
.+...+++++.++|||||++++.+....... .....+++.+.++++||+...
T Consensus 202 ----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~----------~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 202 ----VRTHEFIPKALSIAKDGAIIHYHNTVPEKLM----------PREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp ----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGT----------TTTTHHHHHHHHHHTTCEEEE
T ss_pred ----hhHHHHHHHHHHHCCCCeEEEEEEeeccccc----------cccHHHHHHHHHHHcCCeeEE
Confidence 3446789999999999999998875432110 012467788999999999766
No 150
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.57 E-value=8.7e-15 Score=136.12 Aligned_cols=113 Identities=19% Similarity=0.208 Sum_probs=90.2
Q ss_pred HHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC----CCCcEEEEcCCCCCC
Q 019479 98 EDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECTIIEGDAEDLP 173 (340)
Q Consensus 98 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~----~~~i~~~~~d~~~~~ 173 (340)
..+...+...... .++.+|||||||+|.++..+++. +..+|+|+|+| .+++.|+++.. ..+++++++|+++++
T Consensus 49 ~~~~~~i~~~~~~-~~~~~VLDlGcGtG~ls~~la~~-g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 125 (376)
T 3r0q_C 49 DAYFNAVFQNKHH-FEGKTVLDVGTGSGILAIWSAQA-GARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDIS 125 (376)
T ss_dssp HHHHHHHHTTTTT-TTTCEEEEESCTTTHHHHHHHHT-TCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCC
T ss_pred HHHHHHHHhcccc-CCCCEEEEeccCcCHHHHHHHhc-CCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcC
Confidence 3444555444433 47899999999999999999998 34599999999 99999987632 245999999999887
Q ss_pred CCCCCccEEEecCccccc---CCHHHHHHHHHHhcccCcEEEEE
Q 019479 174 FPTDYADRYVSAGSIEYW---PDPQRGIKEAYRVLKIGGKACVI 214 (340)
Q Consensus 174 ~~~~~fD~v~~~~~l~~~---~d~~~~l~~~~~~LkpgG~l~i~ 214 (340)
++ ++||+|++..+.+++ .+...+++++.++|||||++++.
T Consensus 126 ~~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 126 LP-EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp CS-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred cC-CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 66 789999997655555 45778999999999999999764
No 151
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.56 E-value=3.9e-14 Score=126.24 Aligned_cols=136 Identities=19% Similarity=0.253 Sum_probs=106.3
Q ss_pred HHHhccccCCCCCCCEEEEEcCccchHHHHHHHhC-CCceEEEEeCCHHHHHHHHHhC----C--CCCcEEEEcCCCCCC
Q 019479 101 RDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKE----P--LKECTIIEGDAEDLP 173 (340)
Q Consensus 101 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~----~--~~~i~~~~~d~~~~~ 173 (340)
...++..+.. .++.+|||+|||+|.++..+++.. |+.+|+++|+++.+++.|+++. . ..+++++++|+.+.+
T Consensus 88 ~~~i~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~ 166 (280)
T 1i9g_A 88 AAQIVHEGDI-FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE 166 (280)
T ss_dssp HHHHHHHTTC-CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC
T ss_pred HHHHHHHcCC-CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC
Confidence 3444444443 478899999999999999999864 5789999999999999999873 2 468999999998877
Q ss_pred CCCCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHH-CCCcEE
Q 019479 174 FPTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQK-AGFKDV 252 (340)
Q Consensus 174 ~~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-aGF~~v 252 (340)
+++++||+|++ +.+++..+++++.++|+|||++++..+... ...++.+.+++ .||..+
T Consensus 167 ~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~----------------~~~~~~~~l~~~~~f~~~ 225 (280)
T 1i9g_A 167 LPDGSVDRAVL-----DMLAPWEVLDAVSRLLVAGGVLMVYVATVT----------------QLSRIVEALRAKQCWTEP 225 (280)
T ss_dssp CCTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESSHH----------------HHHHHHHHHHHHSSBCCC
T ss_pred CCCCceeEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCCHH----------------HHHHHHHHHHhcCCcCCc
Confidence 77788999998 456777899999999999999999875421 12344455665 899877
Q ss_pred EEEEeC
Q 019479 253 KLKRIG 258 (340)
Q Consensus 253 ~~~~~~ 258 (340)
+..+..
T Consensus 226 ~~~~~~ 231 (280)
T 1i9g_A 226 RAWETL 231 (280)
T ss_dssp EEECCC
T ss_pred EEEEEe
Confidence 766543
No 152
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.56 E-value=2.1e-15 Score=124.49 Aligned_cols=139 Identities=11% Similarity=-0.065 Sum_probs=100.6
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC---CC-CcEEEEcCCCCCCCCCCCccEEEecCc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---LK-ECTIIEGDAEDLPFPTDYADRYVSAGS 187 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~---~~-~i~~~~~d~~~~~~~~~~fD~v~~~~~ 187 (340)
.++.+|||+|||+|.++..++...|+.+|+++|+|+.|++.+++++. .. ++++ .|.... .+.++||+|++..+
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~-~~~~~~DvVLa~k~ 124 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD-VYKGTYDVVFLLKM 124 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH-HTTSEEEEEEEETC
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc-CCCCCcChhhHhhH
Confidence 35789999999999999999999899999999999999999998742 22 3444 666443 35678999999999
Q ss_pred ccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEeCCc
Q 019479 188 IEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRIGPK 260 (340)
Q Consensus 188 l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~~ 260 (340)
+|++++.+..+.++.+.|||||.++-...-.-... . ..+...-...|++.+ ...+.+++...++..
T Consensus 125 LHlL~~~~~al~~v~~~L~pggvfISfptksl~Gr-~-----~gm~~~Y~~~~~~~~-~~~~~~~~~~~~~nE 190 (200)
T 3fzg_A 125 LPVLKQQDVNILDFLQLFHTQNFVISFPIKSLSGK-E-----KGMEENYQLWFESFT-KGWIKILDSKVIGNE 190 (200)
T ss_dssp HHHHHHTTCCHHHHHHTCEEEEEEEEEECCCCC---C-----TTCCCCHHHHHHHHT-TTTSCEEEEEEETTE
T ss_pred HHhhhhhHHHHHHHHHHhCCCCEEEEeChHHhcCC-C-----cchhhhHHHHHHHhc-cCcceeeeeeeeCce
Confidence 99996667778899999999998866541110000 0 000011234555555 667777777777644
No 153
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.56 E-value=8.2e-15 Score=134.98 Aligned_cols=99 Identities=23% Similarity=0.202 Sum_probs=84.8
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---C-CCCcEEEEcCCCCCCCCCCCccEEEecCcc
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---P-LKECTIIEGDAEDLPFPTDYADRYVSAGSI 188 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~-~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l 188 (340)
++.+|||||||+|.++..+++. +..+|+|+|+| .+++.|+++. . .++++++++|++++++++++||+|++..+.
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKA-GARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMG 143 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCB
T ss_pred CCCEEEEEeccchHHHHHHHHC-CCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccc
Confidence 6889999999999999999998 55699999999 4999998763 2 245999999999988888999999997654
Q ss_pred ---cccCCHHHHHHHHHHhcccCcEEEE
Q 019479 189 ---EYWPDPQRGIKEAYRVLKIGGKACV 213 (340)
Q Consensus 189 ---~~~~d~~~~l~~~~~~LkpgG~l~i 213 (340)
++..+...+++++.++|||||+++.
T Consensus 144 ~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 144 YCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp BTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 4447888999999999999999863
No 154
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.56 E-value=4.3e-14 Score=126.29 Aligned_cols=146 Identities=13% Similarity=0.106 Sum_probs=105.0
Q ss_pred HHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeC-CHHHHHHHHHhC-----CC--------CCcEE
Q 019479 99 DMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQ-SPHQLAKAKQKE-----PL--------KECTI 164 (340)
Q Consensus 99 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~-s~~~~~~a~~~~-----~~--------~~i~~ 164 (340)
.+...+...... .++.+|||+|||+|.++..+++. +..+|+++|+ |+.+++.++++. .. .++++
T Consensus 66 ~l~~~l~~~~~~-~~~~~vLDlG~G~G~~~~~~a~~-~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~ 143 (281)
T 3bzb_A 66 ALADTLCWQPEL-IAGKTVCELGAGAGLVSIVAFLA-GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKV 143 (281)
T ss_dssp HHHHHHHHCGGG-TTTCEEEETTCTTSHHHHHHHHT-TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEE
T ss_pred HHHHHHHhcchh-cCCCeEEEecccccHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEE
Confidence 344444443322 36789999999999999988886 3359999999 899999999875 22 26778
Q ss_pred EEcCCCCCC--C----CCCCccEEEecCcccccCCHHHHHHHHHHhcc---c--CcEEEEEccCCCchhHhhHhhhHhhc
Q 019479 165 IEGDAEDLP--F----PTDYADRYVSAGSIEYWPDPQRGIKEAYRVLK---I--GGKACVIGPVYPTFWLSRFFADVWML 233 (340)
Q Consensus 165 ~~~d~~~~~--~----~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lk---p--gG~l~i~~~~~~~~~~~~~~~~~~~~ 233 (340)
...|..+.. + .+++||+|++..++++.++...+++.+.++|| | ||++++........ .
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~-~---------- 212 (281)
T 3bzb_A 144 VPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHHRPH-L---------- 212 (281)
T ss_dssp EECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC----------------
T ss_pred EEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecc-c----------
Confidence 866654421 1 35789999999999999999999999999999 9 99987753321100 0
Q ss_pred CCCHHHHHHHHHHCC-CcEEEEEEe
Q 019479 234 FPKEEEYIEWFQKAG-FKDVKLKRI 257 (340)
Q Consensus 234 ~~~~~~~~~~l~~aG-F~~v~~~~~ 257 (340)
.....++.+.++++| |+++.+...
T Consensus 213 ~~~~~~~~~~l~~~G~f~v~~~~~~ 237 (281)
T 3bzb_A 213 AERDLAFFRLVNADGALIAEPWLSP 237 (281)
T ss_dssp ---CTHHHHHHHHSTTEEEEEEECC
T ss_pred chhHHHHHHHHHhcCCEEEEEeccc
Confidence 012345667889999 998877554
No 155
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.55 E-value=8.8e-15 Score=134.28 Aligned_cols=108 Identities=25% Similarity=0.272 Sum_probs=88.1
Q ss_pred HHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---C-CCCcEEEEcCCCCCCCCCC
Q 019479 102 DEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---P-LKECTIIEGDAEDLPFPTD 177 (340)
Q Consensus 102 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~-~~~i~~~~~d~~~~~~~~~ 177 (340)
..+...... .++.+|||||||+|.++..+++. +..+|+|+|+|+ +++.|+++. . .++++++++|+.+++++++
T Consensus 54 ~~i~~~~~~-~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 130 (340)
T 2fyt_A 54 DFIYQNPHI-FKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVE 130 (340)
T ss_dssp HHHHHCGGG-TTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCS
T ss_pred HHHHhhhhh-cCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCC
Confidence 344443333 46889999999999999999987 446999999996 999998763 2 2679999999999888878
Q ss_pred CccEEEecC---cccccCCHHHHHHHHHHhcccCcEEE
Q 019479 178 YADRYVSAG---SIEYWPDPQRGIKEAYRVLKIGGKAC 212 (340)
Q Consensus 178 ~fD~v~~~~---~l~~~~d~~~~l~~~~~~LkpgG~l~ 212 (340)
+||+|++.. .+.+..+...+++++.++|||||+++
T Consensus 131 ~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 131 KVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred cEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 999999876 45555667789999999999999987
No 156
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.55 E-value=3.5e-14 Score=120.10 Aligned_cols=98 Identities=16% Similarity=0.184 Sum_probs=79.5
Q ss_pred CCCCCEEEEEcCccchHHHHHHHhCC--CceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC---------------
Q 019479 111 FDRNMRVVDVGGGTGFTTLGIVKHVD--AKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP--------------- 173 (340)
Q Consensus 111 ~~~~~~vLDiGcG~G~~~~~l~~~~~--~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~--------------- 173 (340)
..++.+|||+|||+|.++..+++.++ +.+|+|+|+|+.. ..++++++++|+.+.+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~--------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~ 91 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD--------PIPNVYFIQGEIGKDNMNNIKNINYIDNMNN 91 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC--------CCTTCEEEECCTTTTSSCCC-----------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC--------CCCCceEEEccccchhhhhhccccccccccc
Confidence 35778999999999999999999987 6899999999832 2367899999998765
Q ss_pred ----------CCCCCccEEEecCcccccC----CHH-------HHHHHHHHhcccCcEEEEEcc
Q 019479 174 ----------FPTDYADRYVSAGSIEYWP----DPQ-------RGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 174 ----------~~~~~fD~v~~~~~l~~~~----d~~-------~~l~~~~~~LkpgG~l~i~~~ 216 (340)
+++++||+|++..++++.. +.. .+++++.++|||||++++...
T Consensus 92 ~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 92 NSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 4567899999988777642 222 378999999999999988643
No 157
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.55 E-value=1.7e-13 Score=118.28 Aligned_cols=137 Identities=18% Similarity=0.070 Sum_probs=98.4
Q ss_pred CCCCEEEEEcCccchHHHHHHHhC-CCceEEEEeCCHHHHHHHHHhCC-CCCcEEEEcCCCCCC---CCCCCccEEEecC
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEP-LKECTIIEGDAEDLP---FPTDYADRYVSAG 186 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~-~~~i~~~~~d~~~~~---~~~~~fD~v~~~~ 186 (340)
.++.+|||+|||+|.++..+++.+ +..+|+|+|+|+.+++.++++.. .++++++++|+.+.. ...++||+|++..
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~ 151 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDV 151 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECC
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECC
Confidence 478899999999999999999886 45899999999999998887643 268999999997631 1245799999865
Q ss_pred cccccCCHH-HHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEeCC
Q 019479 187 SIEYWPDPQ-RGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRIGP 259 (340)
Q Consensus 187 ~l~~~~d~~-~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~ 259 (340)
. .++.. .+++++.++|||||++++........ ...... ....+++.++ +++ |++++...+.+
T Consensus 152 ~---~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~~~~~~-----~~~~~~l~~l-~~~-f~~~~~~~~~~ 214 (227)
T 1g8a_A 152 A---QPTQAKILIDNAEVYLKRGGYGMIAVKSRSID-VTKEPE-----QVFREVEREL-SEY-FEVIERLNLEP 214 (227)
T ss_dssp C---STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTC-TTSCHH-----HHHHHHHHHH-HTT-SEEEEEEECTT
T ss_pred C---CHhHHHHHHHHHHHhcCCCCEEEEEEecCCCC-CCCChh-----hhhHHHHHHH-Hhh-ceeeeEeccCc
Confidence 4 23443 45999999999999998872111100 000000 0124566666 777 99998888753
No 158
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.54 E-value=6.7e-14 Score=119.95 Aligned_cols=125 Identities=16% Similarity=0.152 Sum_probs=100.1
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CC-CCcEEEEcCCCC-CCCCCCCccEEEecC
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PL-KECTIIEGDAED-LPFPTDYADRYVSAG 186 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~-~~i~~~~~d~~~-~~~~~~~fD~v~~~~ 186 (340)
+++.+|||||||+|..+..++...|..+|+++|+++.+++.|+++. .. .++++..+|..+ ++. .++||+|+...
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~-~~~~D~IviaG 92 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE-TDQVSVITIAG 92 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-GGCCCEEEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc-CcCCCEEEEcC
Confidence 4678999999999999999999877789999999999999999873 22 469999999854 332 22699998765
Q ss_pred cccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEe
Q 019479 187 SIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRI 257 (340)
Q Consensus 187 ~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~ 257 (340)
+... -...++.++.+.|+++|++++.... ..+.+.++|.+.||.+++..-+
T Consensus 93 ~Gg~--~i~~Il~~~~~~L~~~~~lVlq~~~------------------~~~~vr~~L~~~Gf~i~~e~lv 143 (225)
T 3kr9_A 93 MGGR--LIARILEEGLGKLANVERLILQPNN------------------REDDLRIWLQDHGFQIVAESIL 143 (225)
T ss_dssp ECHH--HHHHHHHHTGGGCTTCCEEEEEESS------------------CHHHHHHHHHHTTEEEEEEEEE
T ss_pred CChH--HHHHHHHHHHHHhCCCCEEEEECCC------------------CHHHHHHHHHHCCCEEEEEEEE
Confidence 5332 1457899999999999999886431 4678889999999999887644
No 159
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.54 E-value=5.8e-14 Score=120.54 Aligned_cols=126 Identities=10% Similarity=0.057 Sum_probs=102.5
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---C-CCCcEEEEcCCCCCCCCCCCccEEEecCc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---P-LKECTIIEGDAEDLPFPTDYADRYVSAGS 187 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~-~~~i~~~~~d~~~~~~~~~~fD~v~~~~~ 187 (340)
+++.+|||||||+|..+..+++..+..+|+++|+++.+++.|+++. . .+++++.++|..+...++++||+|+..++
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGm 99 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGM 99 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCC
Confidence 4788999999999999999999866679999999999999999873 2 24699999999775544447999887655
Q ss_pred ccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEe
Q 019479 188 IEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRI 257 (340)
Q Consensus 188 l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~ 257 (340)
... -...++....+.|+++|++++.... ..+.++++|.+.||.+++..-+
T Consensus 100 Gg~--lI~~IL~~~~~~l~~~~~lIlqp~~------------------~~~~lr~~L~~~Gf~i~~E~lv 149 (230)
T 3lec_A 100 GGR--LIADILNNDIDKLQHVKTLVLQPNN------------------REDDLRKWLAANDFEIVAEDIL 149 (230)
T ss_dssp CHH--HHHHHHHHTGGGGTTCCEEEEEESS------------------CHHHHHHHHHHTTEEEEEEEEE
T ss_pred chH--HHHHHHHHHHHHhCcCCEEEEECCC------------------ChHHHHHHHHHCCCEEEEEEEE
Confidence 442 2357888899999999999887532 4678899999999999887755
No 160
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.54 E-value=1e-13 Score=127.99 Aligned_cols=145 Identities=20% Similarity=0.188 Sum_probs=110.5
Q ss_pred CCCCchHHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhC-CCceEEEEeCCHHHHHHHHHhC---CCCCcEEEEc
Q 019479 92 NPGHWTEDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKE---PLKECTIIEG 167 (340)
Q Consensus 92 ~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~ 167 (340)
.+....+.+...++..... .++.+|||+|||+|.++..++... +..+++|+|+++.+++.|+++. ...+++++++
T Consensus 183 ~~a~l~~~la~~l~~~~~~-~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~ 261 (354)
T 3tma_A 183 LRGSLTPVLAQALLRLADA-RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRA 261 (354)
T ss_dssp SSCSCCHHHHHHHHHHTTC-CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEEC
T ss_pred CCCCcCHHHHHHHHHHhCC-CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeC
Confidence 3344555566666665554 468899999999999999999986 6789999999999999999873 3237999999
Q ss_pred CCCCCCCCCCCccEEEecCcccccCC--------HHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHH
Q 019479 168 DAEDLPFPTDYADRYVSAGSIEYWPD--------PQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEE 239 (340)
Q Consensus 168 d~~~~~~~~~~fD~v~~~~~l~~~~d--------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (340)
|+.+++.+.+.||+|+++-.+..... ...+++++.++|||||++++..+ +.+.
T Consensus 262 D~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~-------------------~~~~ 322 (354)
T 3tma_A 262 DARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL-------------------RPAL 322 (354)
T ss_dssp CGGGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES-------------------CHHH
T ss_pred ChhhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC-------------------CHHH
Confidence 99988766777999999765543211 15789999999999999999864 2334
Q ss_pred HHHHHHHCCCcEEEEEEe
Q 019479 240 YIEWFQKAGFKDVKLKRI 257 (340)
Q Consensus 240 ~~~~l~~aGF~~v~~~~~ 257 (340)
+.+.++ .||+..+...+
T Consensus 323 ~~~~~~-~g~~~~~~~~l 339 (354)
T 3tma_A 323 LKRALP-PGFALRHARVV 339 (354)
T ss_dssp HHHHCC-TTEEEEEEEEC
T ss_pred HHHHhh-cCcEEEEEEEE
Confidence 455555 89988776655
No 161
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.53 E-value=5.9e-14 Score=121.45 Aligned_cols=111 Identities=21% Similarity=0.173 Sum_probs=90.0
Q ss_pred HHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCC-CcEEEEcCCCCCCCCCC
Q 019479 99 DMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK-ECTIIEGDAEDLPFPTD 177 (340)
Q Consensus 99 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~-~i~~~~~d~~~~~~~~~ 177 (340)
.+...++..+.. .++.+|||||||+|.++..+++. +.+|+++|+++.+++.++++.... +++++++|+.+....++
T Consensus 57 ~~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~ 133 (231)
T 1vbf_A 57 NLGIFMLDELDL-HKGQKVLEIGTGIGYYTALIAEI--VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEK 133 (231)
T ss_dssp HHHHHHHHHTTC-CTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGC
T ss_pred HHHHHHHHhcCC-CCCCEEEEEcCCCCHHHHHHHHH--cCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCC
Confidence 344444554443 47889999999999999999998 489999999999999999884432 79999999976333467
Q ss_pred CccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCC
Q 019479 178 YADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVY 218 (340)
Q Consensus 178 ~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~ 218 (340)
+||+|++..+++++. .++.++|||||++++.....
T Consensus 134 ~fD~v~~~~~~~~~~------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 134 PYDRVVVWATAPTLL------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp CEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEECSS
T ss_pred CccEEEECCcHHHHH------HHHHHHcCCCcEEEEEEcCC
Confidence 899999999999886 46899999999999986543
No 162
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.53 E-value=5.6e-14 Score=120.94 Aligned_cols=105 Identities=14% Similarity=0.215 Sum_probs=85.8
Q ss_pred CCCEEEEEcCccchHHHHHHHhCC-CceEEEEeCCHHHHHHHHHhCC----CCCcEEEEcCCCC-CCC-C----CCCccE
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEP----LKECTIIEGDAED-LPF-P----TDYADR 181 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~----~~~i~~~~~d~~~-~~~-~----~~~fD~ 181 (340)
++.+|||||||+|..+..+++.++ +.+|+++|+++.+++.|+++.. .++++++++|+.+ ++. . .++||+
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~ 137 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDM 137 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEE
Confidence 578999999999999999999764 7899999999999999998632 2469999999844 222 2 268999
Q ss_pred EEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCC
Q 019479 182 YVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVY 218 (340)
Q Consensus 182 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~ 218 (340)
|++....++..+....+..+ ++|||||++++.+...
T Consensus 138 V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 138 VFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp EEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred EEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCC
Confidence 99998887776666778888 9999999998876543
No 163
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.53 E-value=9.5e-15 Score=124.01 Aligned_cols=103 Identities=16% Similarity=0.104 Sum_probs=83.9
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CC--CCcEEEEcCCCCCC--CCCCC-ccEEEe
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PL--KECTIIEGDAEDLP--FPTDY-ADRYVS 184 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~--~~i~~~~~d~~~~~--~~~~~-fD~v~~ 184 (340)
++.+|||+|||+|.++..++.. ...+|+|+|+|+.+++.|+++. .. ++++++++|+.++. ..+++ ||+|++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSR-QAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT-TCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 5689999999999999987776 2469999999999999999873 32 57999999986643 23578 999999
Q ss_pred cCcccccCCHHHHHHHH--HHhcccCcEEEEEccC
Q 019479 185 AGSIEYWPDPQRGIKEA--YRVLKIGGKACVIGPV 217 (340)
Q Consensus 185 ~~~l~~~~d~~~~l~~~--~~~LkpgG~l~i~~~~ 217 (340)
...++ ..+...+++.+ .++|||||.+++....
T Consensus 132 ~~~~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 132 DPPFH-FNLAEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp CCCSS-SCHHHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred CCCCC-CccHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 88754 56667888988 6789999999987644
No 164
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.52 E-value=2.6e-14 Score=124.41 Aligned_cols=122 Identities=14% Similarity=0.083 Sum_probs=94.5
Q ss_pred CCCEEEEEcCccchHHHHHHHh----CCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCC---CCCC-CCccEEEe
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKH----VDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDL---PFPT-DYADRYVS 184 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~----~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~---~~~~-~~fD~v~~ 184 (340)
++.+|||||||+|..+..+++. .++.+|+++|+|+.+++.|+.. ..+++++++|+.+. +... .+||+|++
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~--~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~ 158 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASD--MENITLHQGDCSDLTTFEHLREMAHPLIFI 158 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGG--CTTEEEEECCSSCSGGGGGGSSSCSSEEEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhcc--CCceEEEECcchhHHHHHhhccCCCCEEEE
Confidence 4679999999999999999987 5779999999999999888732 36899999999874 4333 37999998
Q ss_pred cCcccccCCHHHHHHHHHH-hcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHC--CCcE
Q 019479 185 AGSIEYWPDPQRGIKEAYR-VLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKA--GFKD 251 (340)
Q Consensus 185 ~~~l~~~~d~~~~l~~~~~-~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a--GF~~ 251 (340)
... | .+...+++++.+ +|||||++++.+.. ..+.. .+.+.+.+++++. +|+.
T Consensus 159 d~~--~-~~~~~~l~~~~r~~LkpGG~lv~~d~~-----------~~~~~-~~~~~~~~~l~~~~~~f~~ 213 (236)
T 2bm8_A 159 DNA--H-ANTFNIMKWAVDHLLEEGDYFIIEDMI-----------PYWYR-YAPQLFSEYLGAFRDVLSM 213 (236)
T ss_dssp ESS--C-SSHHHHHHHHHHHTCCTTCEEEECSCH-----------HHHHH-HCHHHHHHHHHTTTTTEEE
T ss_pred CCc--h-HhHHHHHHHHHHhhCCCCCEEEEEeCc-----------ccccc-cCHHHHHHHHHhCcccEEE
Confidence 665 3 377889999997 99999999987651 00100 1345778888887 5664
No 165
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.52 E-value=3.3e-14 Score=130.32 Aligned_cols=142 Identities=18% Similarity=0.162 Sum_probs=83.7
Q ss_pred CCCCEEEEEcCccchHHHHHHHhC-CCceEEEEeCCHHHHHHHHHhCC--------------CCCcEEEEcCCCCC--CC
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEP--------------LKECTIIEGDAEDL--PF 174 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~--------------~~~i~~~~~d~~~~--~~ 174 (340)
.++.+|||+|||+|.++..+++.. +..+|+++|+++.+++.|+++.. ..+++++.+|+.+. ++
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~ 183 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDI 183 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC---
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccccc
Confidence 478899999999999999999985 55899999999999999998643 25799999999875 45
Q ss_pred CCCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCCchh-HhhHhhh----------------HhhcC---
Q 019479 175 PTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFW-LSRFFAD----------------VWMLF--- 234 (340)
Q Consensus 175 ~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~-~~~~~~~----------------~~~~~--- 234 (340)
++++||+|++. ..++..+++++.++|||||++++..+...... ....+.. .|...
T Consensus 184 ~~~~fD~V~~~-----~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~~~ 258 (336)
T 2b25_A 184 KSLTFDAVALD-----MLNPHVTLPVFYPHLKHGGVCAVYVVNITQVIELLDGIRTCELALSCEKISEVIVRDWLVCLAK 258 (336)
T ss_dssp ----EEEEEEC-----SSSTTTTHHHHGGGEEEEEEEEEEESSHHHHHHHHHHHHHHTCCEEEEEEECCCCCCEEECC--
T ss_pred CCCCeeEEEEC-----CCCHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhcCCCcccceEEEecccceEEEeec
Confidence 66789999984 33455689999999999999998766432211 0111111 01111
Q ss_pred CCHHHHHHHHHHCCCcEEEEEEeC
Q 019479 235 PKEEEYIEWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 235 ~~~~~~~~~l~~aGF~~v~~~~~~ 258 (340)
....++.+.|+++||+++++....
T Consensus 259 ~~~g~y~~~l~~aGF~~v~~~~~~ 282 (336)
T 2b25_A 259 QKNGILAQKVESKINTDVQLDSQE 282 (336)
T ss_dssp ------------------------
T ss_pred ccccchhhhhcccccccccccccc
Confidence 111278889999999999887764
No 166
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.52 E-value=7.7e-14 Score=126.81 Aligned_cols=111 Identities=23% Similarity=0.256 Sum_probs=91.0
Q ss_pred HHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCC-CceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCCCCCC
Q 019479 100 MRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAEDLPFP 175 (340)
Q Consensus 100 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~~~~~ 175 (340)
....++..+.. .++.+|||||||+|.++..+++..+ ..+|+|+|+|+.+++.|+++. ...+++++.+|+.+.+..
T Consensus 63 ~~~~l~~~l~~-~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~ 141 (317)
T 1dl5_A 63 LMALFMEWVGL-DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPE 141 (317)
T ss_dssp HHHHHHHHTTC-CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG
T ss_pred HHHHHHHhcCC-CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcccc
Confidence 34444444443 4788999999999999999999865 367999999999999999873 345699999999875545
Q ss_pred CCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccC
Q 019479 176 TDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 176 ~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
+++||+|++..+++++. +++.+.|||||++++....
T Consensus 142 ~~~fD~Iv~~~~~~~~~------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 142 FSPYDVIFVTVGVDEVP------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp GCCEEEEEECSBBSCCC------HHHHHHEEEEEEEEEEBCB
T ss_pred CCCeEEEEEcCCHHHHH------HHHHHhcCCCcEEEEEECC
Confidence 67899999999999986 5788999999999998543
No 167
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.51 E-value=5.8e-14 Score=122.94 Aligned_cols=99 Identities=19% Similarity=0.302 Sum_probs=83.3
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC-----------CCCCcEEEEcCCCC-CC--CCCC
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE-----------PLKECTIIEGDAED-LP--FPTD 177 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~-----------~~~~i~~~~~d~~~-~~--~~~~ 177 (340)
.++.+|||||||+|.++..+++..|...|+|+|+|+.+++.++++. ...|++++++|+.+ ++ +..+
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 3678999999999999999999988889999999999999998652 33689999999976 55 6678
Q ss_pred CccEEEecCcccccCCH-------------HHHHHHHHHhcccCcEEEEEc
Q 019479 178 YADRYVSAGSIEYWPDP-------------QRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 178 ~fD~v~~~~~l~~~~d~-------------~~~l~~~~~~LkpgG~l~i~~ 215 (340)
++|.|++.. +++ ..+++++.++|||||+|++..
T Consensus 128 ~~d~v~~~~-----p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 128 QLSKMFFCF-----PDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp CEEEEEEES-----CCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCEEEEEC-----CCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 899998643 333 479999999999999999864
No 168
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.51 E-value=8.4e-15 Score=121.47 Aligned_cols=105 Identities=13% Similarity=0.060 Sum_probs=83.9
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC----CCcEEEEcCCCC-CCCCCCCccEEEecC
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL----KECTIIEGDAED-LPFPTDYADRYVSAG 186 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~----~~i~~~~~d~~~-~~~~~~~fD~v~~~~ 186 (340)
.++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|+++... ++++++.+|+.+ ++...++||+|++..
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~ 108 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDP 108 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECC
T ss_pred cCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECC
Confidence 36789999999999999999987 557999999999999999987422 368999999866 333446799999987
Q ss_pred cccccCCHHHHHHHHH--HhcccCcEEEEEccCC
Q 019479 187 SIEYWPDPQRGIKEAY--RVLKIGGKACVIGPVY 218 (340)
Q Consensus 187 ~l~~~~d~~~~l~~~~--~~LkpgG~l~i~~~~~ 218 (340)
.++. .+....++.+. ++|||||++++.....
T Consensus 109 ~~~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 109 PYAK-ETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp SSHH-HHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CCCc-chHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 6532 34456777777 9999999999886543
No 169
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.51 E-value=5.5e-14 Score=130.47 Aligned_cols=112 Identities=17% Similarity=0.231 Sum_probs=88.4
Q ss_pred ccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC------CCcEEEEcCCCCCCCCCCC
Q 019479 105 LEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL------KECTIIEGDAEDLPFPTDY 178 (340)
Q Consensus 105 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~------~~i~~~~~d~~~~~~~~~~ 178 (340)
+..+.. .++.+|||+|||+|.++..+++..|+.+|+++|+|+.+++.++++... .+++++.+|+.+ ++++++
T Consensus 215 l~~l~~-~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~ 292 (375)
T 4dcm_A 215 MQHLPE-NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFR 292 (375)
T ss_dssp HHTCCC-SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTC
T ss_pred HHhCcc-cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCC
Confidence 444433 245899999999999999999998889999999999999999987421 257889999977 456778
Q ss_pred ccEEEecCcccccCCH-----HHHHHHHHHhcccCcEEEEEccCC
Q 019479 179 ADRYVSAGSIEYWPDP-----QRGIKEAYRVLKIGGKACVIGPVY 218 (340)
Q Consensus 179 fD~v~~~~~l~~~~d~-----~~~l~~~~~~LkpgG~l~i~~~~~ 218 (340)
||+|+++..+|+.... ..+++++.++|||||+++++....
T Consensus 293 fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~ 337 (375)
T 4dcm_A 293 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH 337 (375)
T ss_dssp EEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred eeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECC
Confidence 9999999888863222 368999999999999999976443
No 170
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.51 E-value=1.5e-14 Score=120.78 Aligned_cols=120 Identities=9% Similarity=0.025 Sum_probs=90.9
Q ss_pred hHHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC----CCCcEEEEcCCCCC
Q 019479 97 TEDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECTIIEGDAEDL 172 (340)
Q Consensus 97 ~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~----~~~i~~~~~d~~~~ 172 (340)
...+...++..+....++.+|||+|||+|.++..+++. +..+|+|+|+++.+++.|+++.. .++++++++|+.+.
T Consensus 28 ~~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 106 (187)
T 2fhp_A 28 TDKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSR-GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRA 106 (187)
T ss_dssp CHHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHH
Confidence 34444444444432236789999999999999988885 45799999999999999997632 24689999998663
Q ss_pred C----CCCCCccEEEecCcccccCCHHHHHHHH--HHhcccCcEEEEEccCC
Q 019479 173 P----FPTDYADRYVSAGSIEYWPDPQRGIKEA--YRVLKIGGKACVIGPVY 218 (340)
Q Consensus 173 ~----~~~~~fD~v~~~~~l~~~~d~~~~l~~~--~~~LkpgG~l~i~~~~~ 218 (340)
. ..+++||+|+++..++ ..+....++.+ .++|||||++++.....
T Consensus 107 ~~~~~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 107 LEQFYEEKLQFDLVLLDPPYA-KQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp HHHHHHTTCCEEEEEECCCGG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred HHHHHhcCCCCCEEEECCCCC-chhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 2 2267899999987754 45667778887 88999999999876543
No 171
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.51 E-value=9.6e-14 Score=120.14 Aligned_cols=126 Identities=15% Similarity=0.097 Sum_probs=101.2
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---C-CCCcEEEEcCCCCCCCCCCCccEEEecCc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---P-LKECTIIEGDAEDLPFPTDYADRYVSAGS 187 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~-~~~i~~~~~d~~~~~~~~~~fD~v~~~~~ 187 (340)
+++.+|||||||+|.++..+++..+..+|+++|+++.+++.|+++. . .+++++.++|..+...++.+||+|++..+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviagm 99 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGM 99 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCC
Confidence 4778999999999999999999866679999999999999999873 2 24599999999765433446999987554
Q ss_pred ccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEe
Q 019479 188 IEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRI 257 (340)
Q Consensus 188 l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~ 257 (340)
... -...++.+..+.|++++++++.... ..+.++++|.+.||.+++...+
T Consensus 100 Gg~--lI~~IL~~~~~~L~~~~~lIlq~~~------------------~~~~lr~~L~~~Gf~i~~E~lv 149 (244)
T 3gnl_A 100 GGT--LIRTILEEGAAKLAGVTKLILQPNI------------------AAWQLREWSEQNNWLITSEAIL 149 (244)
T ss_dssp CHH--HHHHHHHHTGGGGTTCCEEEEEESS------------------CHHHHHHHHHHHTEEEEEEEEE
T ss_pred chH--HHHHHHHHHHHHhCCCCEEEEEcCC------------------ChHHHHHHHHHCCCEEEEEEEE
Confidence 431 2347889999999999999888532 4678889999999999776654
No 172
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.51 E-value=1.1e-13 Score=118.46 Aligned_cols=111 Identities=24% Similarity=0.255 Sum_probs=88.9
Q ss_pred HHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhC-CCceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCCCCCC
Q 019479 100 MRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAEDLPFP 175 (340)
Q Consensus 100 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~~~~~ 175 (340)
....++..+.. .++.+|||||||+|.++..+++.. +..+|+++|+++.+++.++++. ...+++++.+|+......
T Consensus 65 ~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 143 (215)
T 2yxe_A 65 MVGMMCELLDL-KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEP 143 (215)
T ss_dssp HHHHHHHHTTC-CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGG
T ss_pred HHHHHHHhhCC-CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCC
Confidence 33444444433 478899999999999999999986 4489999999999999999763 335799999998543323
Q ss_pred CCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccC
Q 019479 176 TDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 176 ~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
+++||+|++..+++++. +++.++|||||++++....
T Consensus 144 ~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 144 LAPYDRIYTTAAGPKIP------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp GCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEESS
T ss_pred CCCeeEEEECCchHHHH------HHHHHHcCCCcEEEEEECC
Confidence 57899999999999886 4889999999999988643
No 173
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.51 E-value=9e-14 Score=130.35 Aligned_cols=120 Identities=10% Similarity=0.093 Sum_probs=92.6
Q ss_pred HHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHH-------HHh---CC--CCCcEEE
Q 019479 98 EDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKA-------KQK---EP--LKECTII 165 (340)
Q Consensus 98 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a-------~~~---~~--~~~i~~~ 165 (340)
......++..+.. .++.+|||||||+|..+..+++.++..+|+|+|+++.+++.| +++ .. ..+++++
T Consensus 228 p~~v~~ml~~l~l-~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i 306 (433)
T 1u2z_A 228 PNFLSDVYQQCQL-KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFS 306 (433)
T ss_dssp HHHHHHHHHHTTC-CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEE
T ss_pred HHHHHHHHHhcCC-CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEE
Confidence 3445555555544 478899999999999999999987667899999999999888 655 23 3689999
Q ss_pred EcCCCCC--CC--CCCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCC
Q 019479 166 EGDAEDL--PF--PTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYP 219 (340)
Q Consensus 166 ~~d~~~~--~~--~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~ 219 (340)
++|.... ++ ..++||+|+++.++ +.++....|+++.++|||||++++.++..+
T Consensus 307 ~gD~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~d~f~p 363 (433)
T 1u2z_A 307 LKKSFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISLKSLRS 363 (433)
T ss_dssp ESSCSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEESSCSSC
T ss_pred EcCccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEeeccCC
Confidence 8765422 12 24679999998766 346777889999999999999999865443
No 174
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.50 E-value=3.6e-14 Score=129.56 Aligned_cols=98 Identities=28% Similarity=0.293 Sum_probs=82.8
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---C-CCCcEEEEcCCCCCCCCCCCccEEEecCc-
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---P-LKECTIIEGDAEDLPFPTDYADRYVSAGS- 187 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~-~~~i~~~~~d~~~~~~~~~~fD~v~~~~~- 187 (340)
++.+|||||||+|.++..+++. +..+|+|+|+| .+++.|+++. . .++++++.+|++++++++++||+|++..+
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~ 115 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMG 115 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCB
T ss_pred CCCEEEEecCccHHHHHHHHHC-CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCch
Confidence 6789999999999999999887 45699999999 5889888763 2 24699999999988877788999998754
Q ss_pred --ccccCCHHHHHHHHHHhcccCcEEE
Q 019479 188 --IEYWPDPQRGIKEAYRVLKIGGKAC 212 (340)
Q Consensus 188 --l~~~~d~~~~l~~~~~~LkpgG~l~ 212 (340)
+.+..+...++.++.++|||||+++
T Consensus 116 ~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 116 YFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp TTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred hhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 4455667889999999999999997
No 175
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.50 E-value=4.5e-14 Score=123.90 Aligned_cols=104 Identities=14% Similarity=0.043 Sum_probs=84.0
Q ss_pred CCCEEEEEcCccchHHHHHHHh--CCCceEEEEeCCHHHHHHHHHhCCCC-------C----------------------
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKH--VDAKNVTILDQSPHQLAKAKQKEPLK-------E---------------------- 161 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~--~~~~~v~g~D~s~~~~~~a~~~~~~~-------~---------------------- 161 (340)
++.+|||+|||+|.++..+++. .++.+|+|+|+|+.+++.|+++.... +
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 5679999999999999999987 66789999999999999999763322 1
Q ss_pred ---cE-------------EEEcCCCCCCC-----CCCCccEEEecCcccccCC---------HHHHHHHHHHhcccCcEE
Q 019479 162 ---CT-------------IIEGDAEDLPF-----PTDYADRYVSAGSIEYWPD---------PQRGIKEAYRVLKIGGKA 211 (340)
Q Consensus 162 ---i~-------------~~~~d~~~~~~-----~~~~fD~v~~~~~l~~~~d---------~~~~l~~~~~~LkpgG~l 211 (340)
++ ++++|+.+... ...+||+|+++..+++..+ ...+++++.++|||||++
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 66 99999976321 3447999999877766544 248999999999999999
Q ss_pred EEEcc
Q 019479 212 CVIGP 216 (340)
Q Consensus 212 ~i~~~ 216 (340)
+++..
T Consensus 211 ~~~~~ 215 (250)
T 1o9g_A 211 AVTDR 215 (250)
T ss_dssp EEEES
T ss_pred EEeCc
Confidence 98643
No 176
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.50 E-value=4.6e-14 Score=126.22 Aligned_cols=134 Identities=20% Similarity=0.187 Sum_probs=99.4
Q ss_pred hhhhhhhhhhhcccCCCCchHHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC
Q 019479 78 WFYRFLSIVYDHVINPGHWTEDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE 157 (340)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~ 157 (340)
.||+....+....+.++..++.+.+.++..... .++.+|||+|||+|..+..+++. |+.+|+|+|+|+.+++.|+++.
T Consensus 89 ~f~~~~~~v~~~~lipr~~te~lv~~~l~~~~~-~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~ 166 (284)
T 1nv8_A 89 EFMGLSFLVEEGVFVPRPETEELVELALELIRK-YGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNA 166 (284)
T ss_dssp EETTEEEECCTTSCCCCTTHHHHHHHHHHHHHH-HTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHH
T ss_pred EECCeEEEeCCCceecChhHHHHHHHHHHHhcc-cCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHH
Confidence 444443333445566777777777777765532 25679999999999999999999 8899999999999999999873
Q ss_pred ---CCC-CcEEEEcCCCCCCCCCCCc---cEEEecCccc-----------ccC--------CHHHHHHHHH-HhcccCcE
Q 019479 158 ---PLK-ECTIIEGDAEDLPFPTDYA---DRYVSAGSIE-----------YWP--------DPQRGIKEAY-RVLKIGGK 210 (340)
Q Consensus 158 ---~~~-~i~~~~~d~~~~~~~~~~f---D~v~~~~~l~-----------~~~--------d~~~~l~~~~-~~LkpgG~ 210 (340)
... +++++++|+.+. ++ ++| |+|+++--.. |-+ |...+++++. +.|+|||+
T Consensus 167 ~~~~l~~~v~~~~~D~~~~-~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~ 244 (284)
T 1nv8_A 167 ERHGVSDRFFVRKGEFLEP-FK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKI 244 (284)
T ss_dssp HHTTCTTSEEEEESSTTGG-GG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCE
T ss_pred HHcCCCCceEEEECcchhh-cc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCE
Confidence 223 499999999762 22 478 9999972211 211 1227899999 99999999
Q ss_pred EEEEc
Q 019479 211 ACVIG 215 (340)
Q Consensus 211 l~i~~ 215 (340)
+++..
T Consensus 245 l~~e~ 249 (284)
T 1nv8_A 245 VLMEI 249 (284)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 99864
No 177
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.50 E-value=9.4e-14 Score=126.07 Aligned_cols=130 Identities=14% Similarity=0.085 Sum_probs=98.6
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCC-CceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCCCCCCCCCccEEEec--
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAEDLPFPTDYADRYVSA-- 185 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~~~~~~~~fD~v~~~-- 185 (340)
.++.+|||+|||+|..+..+++..+ ..+|+++|+++.+++.++++. ...+++++++|+.+++..+++||+|++.
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~P 196 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDAP 196 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEECC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeCC
Confidence 4788999999999999999999864 489999999999999999773 3457999999998765446689999984
Q ss_pred ----CcccccCCH----------------HHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHH
Q 019479 186 ----GSIEYWPDP----------------QRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQ 245 (340)
Q Consensus 186 ----~~l~~~~d~----------------~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 245 (340)
.++++.++. ..+++++.++|||||++++.+..... ..+.+.+...++
T Consensus 197 csg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~-------------~Ene~~v~~~l~ 263 (315)
T 1ixk_A 197 CTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEP-------------EENEFVIQWALD 263 (315)
T ss_dssp TTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCG-------------GGTHHHHHHHHH
T ss_pred CCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCCh-------------HHhHHHHHHHHh
Confidence 223322221 47899999999999999987654321 114456677888
Q ss_pred HCCCcEEEE
Q 019479 246 KAGFKDVKL 254 (340)
Q Consensus 246 ~aGF~~v~~ 254 (340)
+.||+.+.+
T Consensus 264 ~~~~~~~~~ 272 (315)
T 1ixk_A 264 NFDVELLPL 272 (315)
T ss_dssp HSSEEEECC
T ss_pred cCCCEEecC
Confidence 889876644
No 178
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.50 E-value=4e-14 Score=120.23 Aligned_cols=102 Identities=11% Similarity=0.028 Sum_probs=83.7
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCC-CCCCCCCccEEEecCcc
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAED-LPFPTDYADRYVSAGSI 188 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~-~~~~~~~fD~v~~~~~l 188 (340)
++.+|||+|||+|.++..++... ..+|+++|+|+.+++.|+++. ...+++++++|+.+ ++..+++||+|++...+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~-~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~ 132 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY-AAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPF 132 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCC
Confidence 56899999999999999887772 359999999999999999773 23579999999866 45556789999998774
Q ss_pred cccCCHHHHHHHHHH--hcccCcEEEEEcc
Q 019479 189 EYWPDPQRGIKEAYR--VLKIGGKACVIGP 216 (340)
Q Consensus 189 ~~~~d~~~~l~~~~~--~LkpgG~l~i~~~ 216 (340)
+ ..+...+++.+.+ +|+|||++++...
T Consensus 133 ~-~~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 133 R-RGLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp S-TTTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred C-CCcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 4 5677788888876 5999999988754
No 179
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.49 E-value=1.1e-13 Score=120.20 Aligned_cols=103 Identities=17% Similarity=0.250 Sum_probs=86.3
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CC-CCcEEEEcCCCCC-C-CCCCCccEEEecC
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PL-KECTIIEGDAEDL-P-FPTDYADRYVSAG 186 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~-~~i~~~~~d~~~~-~-~~~~~fD~v~~~~ 186 (340)
++.+|||||||+|..+..+++..++.+|+++|+++.+++.|+++. .. ++++++++|+.+. + ..+++||+|++..
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~ 150 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDA 150 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEET
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcC
Confidence 678999999999999999999777899999999999999999863 22 4799999999764 3 3367899999764
Q ss_pred cccccCCHHHHHHHHHHhcccCcEEEEEccCC
Q 019479 187 SIEYWPDPQRGIKEAYRVLKIGGKACVIGPVY 218 (340)
Q Consensus 187 ~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~ 218 (340)
. ..+...+++++.++|||||++++.+...
T Consensus 151 ~---~~~~~~~l~~~~~~LkpgG~lv~d~~~~ 179 (232)
T 3ntv_A 151 A---KAQSKKFFEIYTPLLKHQGLVITDNVLY 179 (232)
T ss_dssp T---SSSHHHHHHHHGGGEEEEEEEEEECTTG
T ss_pred c---HHHHHHHHHHHHHhcCCCeEEEEeeCCc
Confidence 3 4566789999999999999998865443
No 180
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.49 E-value=1.1e-13 Score=127.39 Aligned_cols=111 Identities=18% Similarity=0.201 Sum_probs=88.6
Q ss_pred HHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---C-CCCcEEEEcCCCCCCCC
Q 019479 100 MRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---P-LKECTIIEGDAEDLPFP 175 (340)
Q Consensus 100 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~-~~~i~~~~~d~~~~~~~ 175 (340)
+...++..... .++.+|||||||+|.++..+++. +..+|+|+|+|+ +++.|+++. . .++++++.+|+++++++
T Consensus 38 y~~~i~~~l~~-~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~ 114 (348)
T 2y1w_A 38 YQRAILQNHTD-FKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP 114 (348)
T ss_dssp HHHHHHHTGGG-TTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS
T ss_pred HHHHHHhcccc-CCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCC
Confidence 44445554443 36789999999999999999886 457999999996 888888662 2 26799999999987755
Q ss_pred CCCccEEEecCcccccCC--HHHHHHHHHHhcccCcEEEEE
Q 019479 176 TDYADRYVSAGSIEYWPD--PQRGIKEAYRVLKIGGKACVI 214 (340)
Q Consensus 176 ~~~fD~v~~~~~l~~~~d--~~~~l~~~~~~LkpgG~l~i~ 214 (340)
++||+|++..+++|+.+ ....+.++.++|||||++++.
T Consensus 115 -~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 115 -EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp -SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred -CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 57999999988887753 457888999999999999854
No 181
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.48 E-value=1.4e-13 Score=120.65 Aligned_cols=103 Identities=17% Similarity=0.203 Sum_probs=85.2
Q ss_pred CCCEEEEEcCccchHHHHHHHhCC-CceEEEEeCCHHHHHHHHHhC---CC-CCcEEEEcCCCC-CCCC--CCCccEEEe
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKE---PL-KECTIIEGDAED-LPFP--TDYADRYVS 184 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~---~~-~~i~~~~~d~~~-~~~~--~~~fD~v~~ 184 (340)
++.+|||||||+|..+..+++.+| +.+|+++|+++.+++.|+++. .. ++++++++|+.+ ++.. .++||+|++
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~ 142 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFI 142 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEE
Confidence 678999999999999999999987 789999999999999999873 22 479999999865 3322 348999998
Q ss_pred cCcccccCCHHHHHHHHHHhcccCcEEEEEccCC
Q 019479 185 AGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVY 218 (340)
Q Consensus 185 ~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~ 218 (340)
... ..+...+++++.++|||||+|++.+...
T Consensus 143 d~~---~~~~~~~l~~~~~~LkpGG~lv~~~~~~ 173 (248)
T 3tfw_A 143 DAD---KPNNPHYLRWALRYSRPGTLIIGDNVVR 173 (248)
T ss_dssp CSC---GGGHHHHHHHHHHTCCTTCEEEEECCSG
T ss_pred CCc---hHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 653 4456689999999999999998876543
No 182
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.47 E-value=2.4e-15 Score=131.19 Aligned_cols=139 Identities=14% Similarity=0.029 Sum_probs=105.5
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CC-CCcEEEEcCCCCCCCCCCCccEEEecCcc
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PL-KECTIIEGDAEDLPFPTDYADRYVSAGSI 188 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~-~~i~~~~~d~~~~~~~~~~fD~v~~~~~l 188 (340)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++. .. ++++++++|+.+++ ++++||+|+++..+
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~ 154 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT--GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPW 154 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCC
T ss_pred CCCEEEECccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCc
Confidence 6789999999999999999997 689999999999999999773 22 47999999998765 56789999999999
Q ss_pred cccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEeC
Q 019479 189 EYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 189 ~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~ 258 (340)
++..+....+.++.++|+|||.+++..... .............+.+++..++...|...++.....
T Consensus 155 ~~~~~~~~~~~~~~~~L~pgG~~i~~~~~~----~~~~~~~~lp~~~~~~~~~~~l~~~g~~~i~~~~~~ 220 (241)
T 3gdh_A 155 GGPDYATAETFDIRTMMSPDGFEIFRLSKK----ITNNIVYFLPRNADIDQVASLAGPGGQVEIEQNFLN 220 (241)
T ss_dssp SSGGGGGSSSBCTTTSCSSCHHHHHHHHHH----HCSCEEEEEETTBCHHHHHHTTCTTCCEEEEEEEET
T ss_pred CCcchhhhHHHHHHhhcCCcceeHHHHHHh----hCCceEEECCCCCCHHHHHHHhccCCCEEEEehhhc
Confidence 998887778889999999999965432100 000000001113367788888888887776665554
No 183
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.47 E-value=1.9e-13 Score=122.60 Aligned_cols=103 Identities=16% Similarity=0.191 Sum_probs=81.5
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC--------CCCCcEEEEcCCCCC-CCCCCCccEEE
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE--------PLKECTIIEGDAEDL-PFPTDYADRYV 183 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~--------~~~~i~~~~~d~~~~-~~~~~~fD~v~ 183 (340)
++.+|||||||+|..+..+++..+..+|+++|+++.+++.|++++ ..++++++.+|..+. ...+++||+|+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 578999999999999999999866789999999999999999874 246899999998663 34467899999
Q ss_pred ecCcccccCCH----HHHHHHHHHhcccCcEEEEEc
Q 019479 184 SAGSIEYWPDP----QRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 184 ~~~~l~~~~d~----~~~l~~~~~~LkpgG~l~i~~ 215 (340)
+.......+.. ..+++++.++|||||++++..
T Consensus 163 ~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 163 SDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp ECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 95543322221 579999999999999999875
No 184
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.47 E-value=5e-13 Score=113.04 Aligned_cols=117 Identities=18% Similarity=0.230 Sum_probs=87.7
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCcccccC
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEYWP 192 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 192 (340)
++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.++++.. +++++++|+.+++ ++||+|+++..++++.
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~--~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~ 124 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG--GVNFMVADVSEIS---GKYDTWIMNPPFGSVV 124 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT--TSEEEECCGGGCC---CCEEEEEECCCC----
T ss_pred CCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC--CCEEEECcHHHCC---CCeeEEEECCCchhcc
Confidence 6789999999999999999887 44589999999999999998875 8999999998864 6799999999999886
Q ss_pred CH--HHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEE
Q 019479 193 DP--QRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKR 256 (340)
Q Consensus 193 d~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~ 256 (340)
+. ..+++++.+++ |+ +++.... . +.+.+.+.++++| +...+..
T Consensus 125 ~~~~~~~l~~~~~~~--g~-~~~~~~~--~---------------~~~~~~~~~~~~g-~~~~~~~ 169 (200)
T 1ne2_A 125 KHSDRAFIDKAFETS--MW-IYSIGNA--K---------------ARDFLRREFSARG-DVFREEK 169 (200)
T ss_dssp ---CHHHHHHHHHHE--EE-EEEEEEG--G---------------GHHHHHHHHHHHE-EEEEEEE
T ss_pred CchhHHHHHHHHHhc--Cc-EEEEEcC--c---------------hHHHHHHHHHHCC-CEEEEEE
Confidence 53 47889999988 44 4444311 1 2345667888888 5544443
No 185
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.47 E-value=1.2e-13 Score=118.86 Aligned_cols=101 Identities=15% Similarity=0.185 Sum_probs=83.2
Q ss_pred CCEEEEEcCccchHHHHHHHhCC-CceEEEEeCCHHHHHHHHHhC---CC--CCcEEEEcCCCCC-C-CCCCCccEEEec
Q 019479 114 NMRVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKE---PL--KECTIIEGDAEDL-P-FPTDYADRYVSA 185 (340)
Q Consensus 114 ~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~---~~--~~i~~~~~d~~~~-~-~~~~~fD~v~~~ 185 (340)
+.+|||||||+|..+..+++.++ +.+|+++|+++.+++.|+++. .. ++++++++|+.+. + +.+++||+|++.
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d 136 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQ 136 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEEC
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEc
Confidence 44999999999999999999875 789999999999999999773 22 4799999998653 2 336789999986
Q ss_pred CcccccCCHHHHHHHHHHhcccCcEEEEEccC
Q 019479 186 GSIEYWPDPQRGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 186 ~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
.. ..+...+++++.++|||||++++.+..
T Consensus 137 ~~---~~~~~~~l~~~~~~LkpGG~lv~dn~~ 165 (221)
T 3dr5_A 137 VS---PMDLKALVDAAWPLLRRGGALVLADAL 165 (221)
T ss_dssp CC---TTTHHHHHHHHHHHEEEEEEEEETTTT
T ss_pred Cc---HHHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 53 345667999999999999999886543
No 186
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.47 E-value=2.7e-13 Score=118.44 Aligned_cols=130 Identities=16% Similarity=0.193 Sum_probs=100.9
Q ss_pred HhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CC-CCcEEEEcCCCCCCCCCCC
Q 019479 103 EALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PL-KECTIIEGDAEDLPFPTDY 178 (340)
Q Consensus 103 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~-~~i~~~~~d~~~~~~~~~~ 178 (340)
.++..... .++.+|||+|||+|.++..+++. +.+|+++|+++.+++.|+++. .. +++++..+|+.+....+++
T Consensus 82 ~~~~~~~~-~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 158 (248)
T 2yvl_A 82 YIALKLNL-NKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGI 158 (248)
T ss_dssp HHHHHTTC-CTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTC
T ss_pred HHHHhcCC-CCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCc
Confidence 33333333 47889999999999999999998 789999999999999999763 22 5789999999774435678
Q ss_pred ccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEe
Q 019479 179 ADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRI 257 (340)
Q Consensus 179 fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~ 257 (340)
||+|++ +.+++..+++++.++|||||++++..+... ...++.+.+++. |..++..+.
T Consensus 159 ~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~----------------~~~~~~~~l~~~-f~~~~~~~~ 215 (248)
T 2yvl_A 159 FHAAFV-----DVREPWHYLEKVHKSLMEGAPVGFLLPTAN----------------QVIKLLESIENY-FGNLEVVEI 215 (248)
T ss_dssp BSEEEE-----CSSCGGGGHHHHHHHBCTTCEEEEEESSHH----------------HHHHHHHHSTTT-EEEEEEEEE
T ss_pred ccEEEE-----CCcCHHHHHHHHHHHcCCCCEEEEEeCCHH----------------HHHHHHHHHHhh-CCcceEEEe
Confidence 999997 455777899999999999999999875421 123455566666 887776655
No 187
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.46 E-value=2.2e-13 Score=118.16 Aligned_cols=102 Identities=13% Similarity=0.205 Sum_probs=86.7
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CC-CCcEEEEcCCCCC-CCC--CCCccEEEec
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PL-KECTIIEGDAEDL-PFP--TDYADRYVSA 185 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~-~~i~~~~~d~~~~-~~~--~~~fD~v~~~ 185 (340)
++.+|||+|||+|..+..+++.+|+.+|+++|+++.+++.|+++. .. .+++++.+|+.+. +.. +++||+|++.
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 133 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFID 133 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEEC
Confidence 678999999999999999999988899999999999999999873 22 4699999999763 322 5689999997
Q ss_pred CcccccCCHHHHHHHHHHhcccCcEEEEEccC
Q 019479 186 GSIEYWPDPQRGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 186 ~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
...+ +...+++++.++|||||++++.+..
T Consensus 134 ~~~~---~~~~~l~~~~~~L~pgG~lv~~~~~ 162 (233)
T 2gpy_A 134 AAKG---QYRRFFDMYSPMVRPGGLILSDNVL 162 (233)
T ss_dssp GGGS---CHHHHHHHHGGGEEEEEEEEEETTT
T ss_pred CCHH---HHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 6653 7789999999999999999997644
No 188
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.46 E-value=7.1e-13 Score=123.09 Aligned_cols=140 Identities=18% Similarity=0.168 Sum_probs=106.1
Q ss_pred CchHHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CC-CCcEEEEcCCC
Q 019479 95 HWTEDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PL-KECTIIEGDAE 170 (340)
Q Consensus 95 ~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~-~~i~~~~~d~~ 170 (340)
...+.+...++... ..++.+|||+|||+|.++..++...+..+|+|+|+|+.+++.|+++. .. ++++++++|+.
T Consensus 201 ~l~~~la~~l~~~~--~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~ 278 (373)
T 3tm4_A 201 HLKASIANAMIELA--ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDAT 278 (373)
T ss_dssp CCCHHHHHHHHHHH--TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGG
T ss_pred CccHHHHHHHHHhh--cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh
Confidence 34455555555555 35788999999999999999999855459999999999999999873 22 47899999999
Q ss_pred CCCCCCCCccEEEecCcccccC----CH----HHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHH
Q 019479 171 DLPFPTDYADRYVSAGSIEYWP----DP----QRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIE 242 (340)
Q Consensus 171 ~~~~~~~~fD~v~~~~~l~~~~----d~----~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (340)
+++.++++||+|+++-.++... +. ..+++++.++| ||.++++.. +.+.+.+
T Consensus 279 ~~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~-------------------~~~~~~~ 337 (373)
T 3tm4_A 279 QLSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT-------------------EKKAIEE 337 (373)
T ss_dssp GGGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES-------------------CHHHHHH
T ss_pred hCCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC-------------------CHHHHHH
Confidence 9887778999999976544321 11 46788888888 555555532 4567788
Q ss_pred HHHHCCCcEEEEEEe
Q 019479 243 WFQKAGFKDVKLKRI 257 (340)
Q Consensus 243 ~l~~aGF~~v~~~~~ 257 (340)
.+++.||+..+...+
T Consensus 338 ~~~~~G~~~~~~~~~ 352 (373)
T 3tm4_A 338 AIAENGFEIIHHRVI 352 (373)
T ss_dssp HHHHTTEEEEEEEEE
T ss_pred HHHHcCCEEEEEEEE
Confidence 999999998877665
No 189
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.46 E-value=2.2e-13 Score=122.48 Aligned_cols=103 Identities=14% Similarity=0.075 Sum_probs=84.7
Q ss_pred CCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC---CCCcEEEEcCCCCC--CCCCCCccEEEecCcc
Q 019479 114 NMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---LKECTIIEGDAEDL--PFPTDYADRYVSAGSI 188 (340)
Q Consensus 114 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~---~~~i~~~~~d~~~~--~~~~~~fD~v~~~~~l 188 (340)
+.+|||||||+|..+..+++.+|+.+++++|+++.+++.|++++. .++++++++|..++ .+++++||+|++....
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 349999999999999999998889999999999999999999864 36799999998653 2346789999986433
Q ss_pred cccCC----HHHHHHHHHHhcccCcEEEEEcc
Q 019479 189 EYWPD----PQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 189 ~~~~d----~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
+.... ...++++++++|||||++++...
T Consensus 170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 32111 25899999999999999988754
No 190
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.46 E-value=1e-13 Score=127.38 Aligned_cols=104 Identities=19% Similarity=0.266 Sum_probs=87.1
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC--CCcEEEEcCCCCCCCCCCCccEEEecCcccc
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL--KECTIIEGDAEDLPFPTDYADRYVSAGSIEY 190 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~--~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 190 (340)
.+.+|||+|||+|.++..+++..|..+|+++|+|+.+++.++++... .+++++.+|+.+.+ +++||+|+++..+|+
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~--~~~fD~Iv~~~~~~~ 273 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEV--KGRFDMIISNPPFHD 273 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC--CSCEEEEEECCCCCS
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccc--cCCeeEEEECCCccc
Confidence 46799999999999999999997778999999999999999987422 23678889986643 678999999999885
Q ss_pred -----cCCHHHHHHHHHHhcccCcEEEEEccCC
Q 019479 191 -----WPDPQRGIKEAYRVLKIGGKACVIGPVY 218 (340)
Q Consensus 191 -----~~d~~~~l~~~~~~LkpgG~l~i~~~~~ 218 (340)
..+...+++++.++|||||++++.....
T Consensus 274 g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 306 (343)
T 2pjd_A 274 GMQTSLDAAQTLIRGAVRHLNSGGELRIVANAF 306 (343)
T ss_dssp SSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETT
T ss_pred CccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCC
Confidence 3345689999999999999999986543
No 191
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.46 E-value=3.1e-13 Score=116.54 Aligned_cols=100 Identities=17% Similarity=0.163 Sum_probs=84.4
Q ss_pred CCCCEEEEEcCccchHHHHHHHhC-CCceEEEEeCCHHHHHHHHHhCC--------CCCcEEEEcCCCCCCCCCCCccEE
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEP--------LKECTIIEGDAEDLPFPTDYADRY 182 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~--------~~~i~~~~~d~~~~~~~~~~fD~v 182 (340)
.++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.++++.. ..+++++++|+...+...++||+|
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i 155 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAI 155 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEE
Confidence 478899999999999999999885 34799999999999999987632 357999999997655556789999
Q ss_pred EecCcccccCCHHHHHHHHHHhcccCcEEEEEccC
Q 019479 183 VSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 183 ~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
++...++++. +++.++|||||++++....
T Consensus 156 ~~~~~~~~~~------~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 156 HVGAAAPVVP------QALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EECSBBSSCC------HHHHHTEEEEEEEEEEESC
T ss_pred EECCchHHHH------HHHHHhcCCCcEEEEEEec
Confidence 9998887663 6889999999999987543
No 192
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.45 E-value=2.1e-13 Score=116.28 Aligned_cols=102 Identities=14% Similarity=0.171 Sum_probs=84.5
Q ss_pred CCCEEEEEcCccchHHHHHHHhCC-CceEEEEeCCHHHHHHHHHhCC----CCCcEEEEcCCCCC-CCCCCCccEEEecC
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEP----LKECTIIEGDAEDL-PFPTDYADRYVSAG 186 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~----~~~i~~~~~d~~~~-~~~~~~fD~v~~~~ 186 (340)
++.+|||||||+|..+..+++.++ +.+|+++|+++.+++.|+++.. .++++++++|+.+. +..++ ||+|++..
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 568999999999999999999887 7899999999999999997632 24689999998653 43446 99999874
Q ss_pred cccccCCHHHHHHHHHHhcccCcEEEEEccCC
Q 019479 187 SIEYWPDPQRGIKEAYRVLKIGGKACVIGPVY 218 (340)
Q Consensus 187 ~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~ 218 (340)
. ..+...+++++.++|||||++++.+...
T Consensus 135 ~---~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 163 (210)
T 3c3p_A 135 D---VFNGADVLERMNRCLAKNALLIAVNALR 163 (210)
T ss_dssp T---TSCHHHHHHHHGGGEEEEEEEEEESSSS
T ss_pred C---hhhhHHHHHHHHHhcCCCeEEEEECccc
Confidence 2 4577899999999999999998876443
No 193
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.45 E-value=2.8e-13 Score=117.71 Aligned_cols=109 Identities=28% Similarity=0.385 Sum_probs=87.2
Q ss_pred HHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHh---CCCCCcEEEEcCCCCCCCCC
Q 019479 100 MRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKECTIIEGDAEDLPFPT 176 (340)
Q Consensus 100 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~---~~~~~i~~~~~d~~~~~~~~ 176 (340)
+...++..+.. .++.+|||||||+|.++..+++..+ .+|+++|+++.+++.|+++ ....+++++.+|+. .++++
T Consensus 79 ~~~~~~~~l~~-~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~-~~~~~ 155 (235)
T 1jg1_A 79 MVAIMLEIANL-KPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGS-KGFPP 155 (235)
T ss_dssp HHHHHHHHHTC-CTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGG-GCCGG
T ss_pred HHHHHHHhcCC-CCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcc-cCCCC
Confidence 44444444443 4678999999999999999999865 8999999999999999986 33457999999973 33343
Q ss_pred -CCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccC
Q 019479 177 -DYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 177 -~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
.+||+|++..+++++. +++.+.|||||++++....
T Consensus 156 ~~~fD~Ii~~~~~~~~~------~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 156 KAPYDVIIVTAGAPKIP------EPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp GCCEEEEEECSBBSSCC------HHHHHTEEEEEEEEEEECS
T ss_pred CCCccEEEECCcHHHHH------HHHHHhcCCCcEEEEEEec
Confidence 3599999999998876 4789999999999988654
No 194
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.45 E-value=4.4e-14 Score=116.08 Aligned_cols=103 Identities=16% Similarity=0.136 Sum_probs=82.3
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC--CCcEEEEcCCCCC-C-C--CCCCccEEEecC
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL--KECTIIEGDAEDL-P-F--PTDYADRYVSAG 186 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~--~~i~~~~~d~~~~-~-~--~~~~fD~v~~~~ 186 (340)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++... .+++++++|+.+. + . ..++||+|++..
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASE--GWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHT--TCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeCCCcCHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 6789999999999999999998 45599999999999999976321 1789999998662 2 1 134799999988
Q ss_pred cccccCCHHHHHHHHH--HhcccCcEEEEEccCCC
Q 019479 187 SIEYWPDPQRGIKEAY--RVLKIGGKACVIGPVYP 219 (340)
Q Consensus 187 ~l~~~~d~~~~l~~~~--~~LkpgG~l~i~~~~~~ 219 (340)
.++ .+....++.+. ++|||||++++......
T Consensus 119 ~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 119 PYA--MDLAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp CTT--SCTTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred CCc--hhHHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 776 56667777777 99999999998865543
No 195
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.45 E-value=2.4e-13 Score=117.30 Aligned_cols=99 Identities=16% Similarity=0.161 Sum_probs=84.3
Q ss_pred CCCCEEEEEcCccchHHHHHHHhC-----CCceEEEEeCCHHHHHHHHHhCC--------CCCcEEEEcCCCCCC----C
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHV-----DAKNVTILDQSPHQLAKAKQKEP--------LKECTIIEGDAEDLP----F 174 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~-----~~~~v~g~D~s~~~~~~a~~~~~--------~~~i~~~~~d~~~~~----~ 174 (340)
.++.+|||||||+|.++..+++.. |..+|+++|+++.+++.|+++.. ..+++++.+|+.+.. .
T Consensus 79 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 158 (227)
T 2pbf_A 79 KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKK 158 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCc
Confidence 478899999999999999999985 34699999999999999997732 467999999997754 4
Q ss_pred CCCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 175 PTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 175 ~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
..++||+|++...++++ ++++.+.|||||++++...
T Consensus 159 ~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 159 ELGLFDAIHVGASASEL------PEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHCCEEEEEECSBBSSC------CHHHHHHEEEEEEEEEEEE
T ss_pred cCCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEEc
Confidence 56789999999998875 4788999999999988754
No 196
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.44 E-value=2.1e-13 Score=117.28 Aligned_cols=103 Identities=15% Similarity=0.125 Sum_probs=84.2
Q ss_pred CCCEEEEEcCccchHHHHHHHhCC-CceEEEEeCCHHHHHHHHHhC---CC-CCcEEEEcCCCCC-C-CC---CCCccEE
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKE---PL-KECTIIEGDAEDL-P-FP---TDYADRY 182 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~---~~-~~i~~~~~d~~~~-~-~~---~~~fD~v 182 (340)
++.+|||||||+|..+..+++.+| +.+|+++|+++.+++.|+++. .. ++++++++|+.+. + +. .++||+|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v 137 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFI 137 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEE
Confidence 678999999999999999999987 789999999999999998763 33 4599999998542 1 11 2579999
Q ss_pred EecCcccccCCHHHHHHHHHHhcccCcEEEEEccCC
Q 019479 183 VSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVY 218 (340)
Q Consensus 183 ~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~ 218 (340)
++.... .+...+++++.++|||||++++.+...
T Consensus 138 ~~d~~~---~~~~~~l~~~~~~L~pgG~lv~~~~~~ 170 (223)
T 3duw_A 138 FIDADK---QNNPAYFEWALKLSRPGTVIIGDNVVR 170 (223)
T ss_dssp EECSCG---GGHHHHHHHHHHTCCTTCEEEEESCSG
T ss_pred EEcCCc---HHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 987653 355689999999999999998876543
No 197
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.44 E-value=1.5e-12 Score=120.92 Aligned_cols=128 Identities=13% Similarity=0.082 Sum_probs=97.5
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCC-CCC-CCCCccEEEecCc
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAED-LPF-PTDYADRYVSAGS 187 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~-~~~-~~~~fD~v~~~~~ 187 (340)
++.+|||+| |+|.++..++...+..+|+++|+++.+++.|+++. ...+++++++|+.+ ++. .+++||+|+++..
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p 250 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPP 250 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCC
Confidence 578999999 99999999998866689999999999999999873 22379999999987 653 3568999999876
Q ss_pred ccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCH---HHHHHHHH-HCCCcEEEEEE
Q 019479 188 IEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKE---EEYIEWFQ-KAGFKDVKLKR 256 (340)
Q Consensus 188 l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~-~aGF~~v~~~~ 256 (340)
++.. ....+++++.++|||||++++...... ..+. ..+.+.+. +.||....+..
T Consensus 251 ~~~~-~~~~~l~~~~~~LkpgG~~~~~~~~~~--------------~~~~~~~~~~~~~l~~~~g~~~~~~~~ 308 (373)
T 2qm3_A 251 ETLE-AIRAFVGRGIATLKGPRCAGYFGITRR--------------ESSLDKWREIQKLLLNEFNVVITDIIR 308 (373)
T ss_dssp SSHH-HHHHHHHHHHHTBCSTTCEEEEEECTT--------------TCCHHHHHHHHHHHHHTSCCEEEEEEE
T ss_pred CchH-HHHHHHHHHHHHcccCCeEEEEEEecC--------------cCCHHHHHHHHHHHHHhcCcchhhhhh
Confidence 6544 257899999999999995533332220 0123 45667777 89998765543
No 198
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.44 E-value=5.4e-13 Score=112.25 Aligned_cols=99 Identities=23% Similarity=0.188 Sum_probs=77.2
Q ss_pred CCCCCEEEEEcCccchHHHHHHHhCCC---------ceEEEEeCCHHHHHHHHHhCCCCCcEEE-EcCCCCCC-------
Q 019479 111 FDRNMRVVDVGGGTGFTTLGIVKHVDA---------KNVTILDQSPHQLAKAKQKEPLKECTII-EGDAEDLP------- 173 (340)
Q Consensus 111 ~~~~~~vLDiGcG~G~~~~~l~~~~~~---------~~v~g~D~s~~~~~~a~~~~~~~~i~~~-~~d~~~~~------- 173 (340)
..++.+|||+|||+|.++..+++.++. .+|+|+|+|+.. ...+++++ .+|+...+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~--------~~~~~~~~~~~d~~~~~~~~~~~~ 91 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF--------PLEGATFLCPADVTDPRTSQRILE 91 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC--------CCTTCEEECSCCTTSHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc--------cCCCCeEEEeccCCCHHHHHHHHH
Confidence 357889999999999999999999754 799999999832 12578899 89986542
Q ss_pred -CCCCCccEEEecCcccc----cCCH-------HHHHHHHHHhcccCcEEEEEccC
Q 019479 174 -FPTDYADRYVSAGSIEY----WPDP-------QRGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 174 -~~~~~fD~v~~~~~l~~----~~d~-------~~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
+++++||+|++...++. ..+. ..+++++.++|||||++++....
T Consensus 92 ~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 92 VLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp HSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred hcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 23468999999665443 2233 37899999999999999988653
No 199
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.44 E-value=2.3e-13 Score=117.59 Aligned_cols=98 Identities=20% Similarity=0.324 Sum_probs=82.8
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCC------ceEEEEeCCHHHHHHHHHhCC--------CCCcEEEEcCCCCCCCCC-
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDA------KNVTILDQSPHQLAKAKQKEP--------LKECTIIEGDAEDLPFPT- 176 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~------~~v~g~D~s~~~~~~a~~~~~--------~~~i~~~~~d~~~~~~~~- 176 (340)
.++.+|||||||+|.++..+++..+. .+|+++|+++.+++.++++.. ..+++++.+|..+ ++++
T Consensus 83 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~ 161 (227)
T 1r18_A 83 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPPN 161 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGGG
T ss_pred CCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCcC
Confidence 47889999999999999999987542 599999999999999987632 3579999999976 3344
Q ss_pred CCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 177 DYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 177 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
++||+|++...++++. +++.+.|||||++++...
T Consensus 162 ~~fD~I~~~~~~~~~~------~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 162 APYNAIHVGAAAPDTP------TELINQLASGGRLIVPVG 195 (227)
T ss_dssp CSEEEEEECSCBSSCC------HHHHHTEEEEEEEEEEES
T ss_pred CCccEEEECCchHHHH------HHHHHHhcCCCEEEEEEe
Confidence 7899999999998875 789999999999988754
No 200
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.44 E-value=2.5e-13 Score=125.31 Aligned_cols=121 Identities=21% Similarity=0.243 Sum_probs=89.4
Q ss_pred hcccCCCCchHHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC----CCCCcE
Q 019479 88 DHVINPGHWTEDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE----PLKECT 163 (340)
Q Consensus 88 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~----~~~~i~ 163 (340)
..+++....+..+...+......+ ++++|||||||+|.++..+++. +..+|+|+|.|+ +++.|++.. ...+|+
T Consensus 59 ~~ML~D~~Rt~aY~~Ai~~~~~~~-~~k~VLDvG~GtGiLs~~Aa~a-GA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~ 135 (376)
T 4hc4_A 59 EEMIADRVRTDAYRLGILRNWAAL-RGKTVLDVGAGTGILSIFCAQA-GARRVYAVEASA-IWQQAREVVRFNGLEDRVH 135 (376)
T ss_dssp HHHHHCHHHHHHHHHHHHTTHHHH-TTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-THHHHHHHHHHTTCTTTEE
T ss_pred HHHhCCHHHHHHHHHHHHhCHHhc-CCCEEEEeCCCccHHHHHHHHh-CCCEEEEEeChH-HHHHHHHHHHHcCCCceEE
Confidence 334444444455555555443332 6899999999999999887776 446899999986 778887652 235699
Q ss_pred EEEcCCCCCCCCCCCccEEEec---CcccccCCHHHHHHHHHHhcccCcEEE
Q 019479 164 IIEGDAEDLPFPTDYADRYVSA---GSIEYWPDPQRGIKEAYRVLKIGGKAC 212 (340)
Q Consensus 164 ~~~~d~~~~~~~~~~fD~v~~~---~~l~~~~d~~~~l~~~~~~LkpgG~l~ 212 (340)
++.+|++++.++ ++||+|++. ..+.+-.....++....+.|||||.++
T Consensus 136 ~i~~~~~~~~lp-e~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 136 VLPGPVETVELP-EQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp EEESCTTTCCCS-SCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred EEeeeeeeecCC-ccccEEEeecccccccccchhhhHHHHHHhhCCCCceEC
Confidence 999999998765 579999984 344444566788999999999999985
No 201
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.43 E-value=3.8e-13 Score=119.54 Aligned_cols=102 Identities=23% Similarity=0.265 Sum_probs=86.8
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCCCCCCCCCccEEEecCcc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAEDLPFPTDYADRYVSAGSI 188 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l 188 (340)
.++.+|||+|||+|.++..+++..+..+|+++|+++.+++.|+++. ...++.++++|+.+.+. .++||+|++....
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYVH 196 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCCS
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECCcc
Confidence 5788999999999999999999876779999999999999999763 33578999999987743 5689999987654
Q ss_pred cccCCHHHHHHHHHHhcccCcEEEEEccCC
Q 019479 189 EYWPDPQRGIKEAYRVLKIGGKACVIGPVY 218 (340)
Q Consensus 189 ~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~ 218 (340)
+...++.++.+.|||||++++.....
T Consensus 197 ----~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 197 ----KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp ----SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred ----cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 56678999999999999999876543
No 202
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.43 E-value=8.2e-14 Score=136.38 Aligned_cols=103 Identities=14% Similarity=0.172 Sum_probs=87.0
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC---CCCcEEEEcCCCCC--CCCCCCccEEEecCc
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---LKECTIIEGDAEDL--PFPTDYADRYVSAGS 187 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~---~~~i~~~~~d~~~~--~~~~~~fD~v~~~~~ 187 (340)
++.+|||||||.|.++..|++. |++|+|+|+|+.+++.|+..+. .-+++|.+++++++ ...+++||+|+|..+
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~ 143 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSV 143 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESC
T ss_pred CCCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcc
Confidence 5689999999999999999998 8999999999999999997643 23689999999886 356778999999999
Q ss_pred ccccCCHH--HHHHHHHHhcccCcEEEEEccC
Q 019479 188 IEYWPDPQ--RGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 188 l~~~~d~~--~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
++|++|+. ..+..+.+.|+++|+.++....
T Consensus 144 ~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~ 175 (569)
T 4azs_A 144 FHHIVHLHGIDEVKRLLSRLADVTQAVILELA 175 (569)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHSSEEEEECC
T ss_pred hhcCCCHHHHHHHHHHHHHhccccceeeEEec
Confidence 99999886 3355677888888887776543
No 203
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.42 E-value=8.5e-13 Score=110.97 Aligned_cols=100 Identities=19% Similarity=0.168 Sum_probs=76.1
Q ss_pred cCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCC-----------C
Q 019479 108 ADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFP-----------T 176 (340)
Q Consensus 108 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~-----------~ 176 (340)
....+++.+|||+|||+|.++..+++. +.+|+|+|+++.. ..++++++++|+.+.+.. .
T Consensus 20 ~~~~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~--------~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (191)
T 3dou_A 20 YRVVRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME--------EIAGVRFIRCDIFKETIFDDIDRALREEGI 89 (191)
T ss_dssp HCCSCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC--------CCTTCEEEECCTTSSSHHHHHHHHHHHHTC
T ss_pred cCCCCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc--------cCCCeEEEEccccCHHHHHHHHHHhhcccC
Confidence 334457899999999999999999988 7899999998742 236899999999875411 1
Q ss_pred CCccEEEecCcccccC----C-------HHHHHHHHHHhcccCcEEEEEccC
Q 019479 177 DYADRYVSAGSIEYWP----D-------PQRGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 177 ~~fD~v~~~~~l~~~~----d-------~~~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
++||+|++........ | ...+++.+.++|||||.+++....
T Consensus 90 ~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~ 141 (191)
T 3dou_A 90 EKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQ 141 (191)
T ss_dssp SSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcC
Confidence 4899999965332211 1 136788999999999999887543
No 204
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.42 E-value=2.7e-13 Score=129.62 Aligned_cols=112 Identities=18% Similarity=0.204 Sum_probs=88.7
Q ss_pred HHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---C-CCCcEEEEcCCCCCC
Q 019479 98 EDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---P-LKECTIIEGDAEDLP 173 (340)
Q Consensus 98 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~-~~~i~~~~~d~~~~~ 173 (340)
+.+...++..... .++.+|||||||+|.++..+++. +..+|+|+|+|+ +++.|+++. . .++++++.+|+++++
T Consensus 144 ~~~~~~il~~l~~-~~~~~VLDiGcGtG~la~~la~~-~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~ 220 (480)
T 3b3j_A 144 GTYQRAILQNHTD-FKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS 220 (480)
T ss_dssp HHHHHHHHHTGGG-TTTCEEEEESCSTTHHHHHHHHT-TCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCC
T ss_pred HHHHHHHHHhhhh-cCCCEEEEecCcccHHHHHHHHc-CCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCc
Confidence 3344445554433 36789999999999999998885 567999999998 888888762 2 267999999998876
Q ss_pred CCCCCccEEEecCcccccCCH--HHHHHHHHHhcccCcEEEE
Q 019479 174 FPTDYADRYVSAGSIEYWPDP--QRGIKEAYRVLKIGGKACV 213 (340)
Q Consensus 174 ~~~~~fD~v~~~~~l~~~~d~--~~~l~~~~~~LkpgG~l~i 213 (340)
++ ++||+|++..+++++.+. ...+.++.++|||||++++
T Consensus 221 ~~-~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 221 LP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp CS-SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred cC-CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 54 579999998887877554 4678889999999999985
No 205
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.42 E-value=2.6e-13 Score=116.84 Aligned_cols=104 Identities=17% Similarity=0.156 Sum_probs=84.8
Q ss_pred CCCEEEEEcCccchHHHHHHHhCC-CceEEEEeCCHHHHHHHHHhC---CC-CCcEEEEcCCCCC-C-CCC----CCccE
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKE---PL-KECTIIEGDAEDL-P-FPT----DYADR 181 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~---~~-~~i~~~~~d~~~~-~-~~~----~~fD~ 181 (340)
++.+|||||||+|..+..+++.+| +.+|+++|+++.+++.|+++. .. ++++++++|+.+. + +.. ++||+
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDL 143 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccE
Confidence 578999999999999999999887 789999999999999999773 22 4599999998542 2 111 68999
Q ss_pred EEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCC
Q 019479 182 YVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYP 219 (340)
Q Consensus 182 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~ 219 (340)
|++... ..+...+++++.++|||||++++.+....
T Consensus 144 v~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 178 (225)
T 3tr6_A 144 IYIDAD---KANTDLYYEESLKLLREGGLIAVDNVLRR 178 (225)
T ss_dssp EEECSC---GGGHHHHHHHHHHHEEEEEEEEEECSSGG
T ss_pred EEECCC---HHHHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 997653 34567899999999999999998876543
No 206
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.41 E-value=4.8e-13 Score=121.99 Aligned_cols=104 Identities=17% Similarity=0.237 Sum_probs=84.1
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC-------CCCcEEEEcCCCCC--CCCCCCccEE
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-------LKECTIIEGDAEDL--PFPTDYADRY 182 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~-------~~~i~~~~~d~~~~--~~~~~~fD~v 182 (340)
..+.+|||||||+|..+..+++..+..+|+++|+|+.+++.|+++.. .++++++++|+.+. ...+++||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 35789999999999999999988667899999999999999998752 46899999998653 2345789999
Q ss_pred EecCcc--cccCC--HHHHHHHHHHhcccCcEEEEEc
Q 019479 183 VSAGSI--EYWPD--PQRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 183 ~~~~~l--~~~~d--~~~~l~~~~~~LkpgG~l~i~~ 215 (340)
++.... +...+ ...+++++.++|||||++++..
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 986442 11111 3589999999999999999873
No 207
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.41 E-value=5.5e-13 Score=118.62 Aligned_cols=133 Identities=17% Similarity=0.059 Sum_probs=98.2
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC-------CCCCcEEEEcCCCC-CCCCCCCccEEEe
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE-------PLKECTIIEGDAED-LPFPTDYADRYVS 184 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~-------~~~~i~~~~~d~~~-~~~~~~~fD~v~~ 184 (340)
.+.+|||||||+|..+..+++..+..+|+++|+++.+++.|+++. ..++++++.+|+.+ ++..+++||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 578999999999999999998766689999999999999999875 24689999999865 3334578999999
Q ss_pred cCcccccCC----HHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEeC
Q 019479 185 AGSIEYWPD----PQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 185 ~~~l~~~~d----~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~ 258 (340)
....+..+. ...+++++.++|||||++++....... ... ....+.+.+++. |..+......
T Consensus 155 d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~--~~~----------~~~~~~~~l~~~-F~~v~~~~~~ 219 (275)
T 1iy9_A 155 DSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWF--TPE----------LITNVQRDVKEI-FPITKLYTAN 219 (275)
T ss_dssp SCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTT--CHH----------HHHHHHHHHHTT-CSEEEEEEEC
T ss_pred CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccc--cHH----------HHHHHHHHHHHh-CCCeEEEEEe
Confidence 654332221 257999999999999999887532110 000 123455667776 7777766543
No 208
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.41 E-value=8.8e-14 Score=121.49 Aligned_cols=103 Identities=15% Similarity=0.077 Sum_probs=84.6
Q ss_pred CCCEEEEEcCccchHHHHHHHhCC-CceEEEEeCCHHHHHHHHHhC---C-CCCcEEEEcCCCCC-CCC-----CCCccE
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKE---P-LKECTIIEGDAEDL-PFP-----TDYADR 181 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~---~-~~~i~~~~~d~~~~-~~~-----~~~fD~ 181 (340)
++.+|||||||+|..+..+++.++ +.+|+++|+++.+++.|+++. . .++++++++|+.+. +.. +++||+
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~ 139 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDF 139 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeE
Confidence 578999999999999999999875 789999999999998888763 2 25799999999653 211 478999
Q ss_pred EEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCC
Q 019479 182 YVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVY 218 (340)
Q Consensus 182 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~ 218 (340)
|++... ..+...+++++.++|||||++++.+...
T Consensus 140 V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~~ 173 (242)
T 3r3h_A 140 IFIDAD---KTNYLNYYELALKLVTPKGLIAIDNIFW 173 (242)
T ss_dssp EEEESC---GGGHHHHHHHHHHHEEEEEEEEEECSSS
T ss_pred EEEcCC---hHHhHHHHHHHHHhcCCCeEEEEECCcc
Confidence 998754 3456688999999999999999976543
No 209
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.41 E-value=3.1e-13 Score=122.54 Aligned_cols=133 Identities=18% Similarity=0.133 Sum_probs=97.6
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC--------CCCcEEEEcCCCC-CCCCCCCccEEE
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP--------LKECTIIEGDAED-LPFPTDYADRYV 183 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~--------~~~i~~~~~d~~~-~~~~~~~fD~v~ 183 (340)
.+.+|||||||+|..+..+++..+..+|+++|+++.+++.|+++.. .++++++.+|+.+ ++..+++||+|+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 5689999999999999999998667899999999999999998752 4689999999865 333467899999
Q ss_pred ecCcccc-cCC------HHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEE
Q 019479 184 SAGSIEY-WPD------PQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKR 256 (340)
Q Consensus 184 ~~~~l~~-~~d------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~ 256 (340)
+....+. ... ...+++++.++|||||++++........ . ......+.+.+++. |..+....
T Consensus 157 ~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~-~----------~~~~~~~~~~l~~~-F~~v~~~~ 224 (314)
T 1uir_A 157 IDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLT-H----------HRVHPVVHRTVREA-FRYVRSYK 224 (314)
T ss_dssp EECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC--------------CHHHHHHHHHHTT-CSEEEEEE
T ss_pred ECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCcccc-C----------HHHHHHHHHHHHHH-CCceEEEE
Confidence 9765543 111 2588999999999999999874221100 0 01234455666666 66665544
Q ss_pred e
Q 019479 257 I 257 (340)
Q Consensus 257 ~ 257 (340)
.
T Consensus 225 ~ 225 (314)
T 1uir_A 225 N 225 (314)
T ss_dssp E
T ss_pred E
Confidence 3
No 210
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.41 E-value=8.2e-13 Score=117.51 Aligned_cols=129 Identities=13% Similarity=0.075 Sum_probs=96.3
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCC-ceEEEEeCCHHHHHHHHHh---CCCCCcEEEEcCCCCCCC----CCCCccEEE
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDA-KNVTILDQSPHQLAKAKQK---EPLKECTIIEGDAEDLPF----PTDYADRYV 183 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~g~D~s~~~~~~a~~~---~~~~~i~~~~~d~~~~~~----~~~~fD~v~ 183 (340)
.++.+|||+|||+|..+..+++..++ .+|+++|+++.+++.++++ ....+++++++|+.+++. ..++||+|+
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl 161 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKIL 161 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEE
Confidence 46889999999999999999998766 8999999999999999876 334589999999976543 256899999
Q ss_pred ecCc------cc------------ccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHH
Q 019479 184 SAGS------IE------------YWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQ 245 (340)
Q Consensus 184 ~~~~------l~------------~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 245 (340)
+.-. +. .......+++++.++|||||++++.+..... ..+.+.+...++
T Consensus 162 ~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~-------------~ene~~v~~~l~ 228 (274)
T 3ajd_A 162 LDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEV-------------EENEEVIKYILQ 228 (274)
T ss_dssp EEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCT-------------TSSHHHHHHHHH
T ss_pred EcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCCh-------------HHhHHHHHHHHH
Confidence 8622 21 1134568999999999999999987654321 124455566665
Q ss_pred H-CCCcEEE
Q 019479 246 K-AGFKDVK 253 (340)
Q Consensus 246 ~-aGF~~v~ 253 (340)
+ .+|+.+.
T Consensus 229 ~~~~~~~~~ 237 (274)
T 3ajd_A 229 KRNDVELII 237 (274)
T ss_dssp HCSSEEEEC
T ss_pred hCCCcEEec
Confidence 5 3566543
No 211
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.41 E-value=1.6e-12 Score=118.10 Aligned_cols=104 Identities=20% Similarity=0.142 Sum_probs=83.5
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC-------CCCcEEEEcCCCCC-CCCCCCccEEEe
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-------LKECTIIEGDAEDL-PFPTDYADRYVS 184 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~-------~~~i~~~~~d~~~~-~~~~~~fD~v~~ 184 (340)
.+.+|||||||+|..+..+++..+..+|+++|+++.+++.|+++.. .++++++++|+.+. +..+++||+|++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 5689999999999999999987667899999999999999998854 36799999998552 223578999998
Q ss_pred cCcccc--cCCH--HHHHHHHHHhcccCcEEEEEcc
Q 019479 185 AGSIEY--WPDP--QRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 185 ~~~l~~--~~d~--~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
...-.. ..+. ..+++++.++|||||++++...
T Consensus 196 d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 231 (321)
T 2pt6_A 196 DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 231 (321)
T ss_dssp ECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 643211 1111 6899999999999999998743
No 212
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.40 E-value=3.2e-12 Score=121.53 Aligned_cols=129 Identities=19% Similarity=0.216 Sum_probs=99.7
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCC-ceEEEEeCCHHHHHHHHHh---CCCCCcEEEEcCCCCCC--CCCCCccEEEe-
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDA-KNVTILDQSPHQLAKAKQK---EPLKECTIIEGDAEDLP--FPTDYADRYVS- 184 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~g~D~s~~~~~~a~~~---~~~~~i~~~~~d~~~~~--~~~~~fD~v~~- 184 (340)
.++.+|||+|||+|..+..+++..++ .+|+++|+++.+++.++++ ....+++++++|+.+++ +++++||+|++
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D 337 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLLD 337 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEEc
Confidence 46889999999999999999998766 8999999999999999876 34468999999998765 44578999996
Q ss_pred -----cCcccccCCH----------------HHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHH
Q 019479 185 -----AGSIEYWPDP----------------QRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEW 243 (340)
Q Consensus 185 -----~~~l~~~~d~----------------~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (340)
..++++.++. ..+++++.++|||||++++.+...... .+.+.+...
T Consensus 338 ~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~-------------ene~~v~~~ 404 (450)
T 2yxl_A 338 APCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKE-------------ENEKNIRWF 404 (450)
T ss_dssp CCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGG-------------GTHHHHHHH
T ss_pred CCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChh-------------hHHHHHHHH
Confidence 2344444443 468999999999999999886544311 144566677
Q ss_pred HHHC-CCcEEE
Q 019479 244 FQKA-GFKDVK 253 (340)
Q Consensus 244 l~~a-GF~~v~ 253 (340)
+++. ||+.+.
T Consensus 405 l~~~~~~~~~~ 415 (450)
T 2yxl_A 405 LNVHPEFKLVP 415 (450)
T ss_dssp HHHCSSCEECC
T ss_pred HHhCCCCEEee
Confidence 7776 787643
No 213
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.40 E-value=3.7e-13 Score=117.89 Aligned_cols=102 Identities=13% Similarity=0.111 Sum_probs=84.6
Q ss_pred CCCEEEEEcCccchHHHHHHHhCC-CceEEEEeCCHHHHHHHHHhC---CC-CCcEEEEcCCCCC-C-C-----CCCCcc
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKE---PL-KECTIIEGDAEDL-P-F-----PTDYAD 180 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~---~~-~~i~~~~~d~~~~-~-~-----~~~~fD 180 (340)
++.+|||||||+|..+..+++.+| +.+|+++|+++.+++.|+++. .. ++++++.+|+.+. + + .+++||
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 158 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYD 158 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBS
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEE
Confidence 568999999999999999999987 789999999999999999763 22 4689999998653 2 1 157899
Q ss_pred EEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccC
Q 019479 181 RYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 181 ~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
+|++... ..+...+++++.++|||||++++.+..
T Consensus 159 ~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~ 192 (247)
T 1sui_A 159 FIFVDAD---KDNYLNYHKRLIDLVKVGGVIGYDNTL 192 (247)
T ss_dssp EEEECSC---STTHHHHHHHHHHHBCTTCCEEEECTT
T ss_pred EEEEcCc---hHHHHHHHHHHHHhCCCCeEEEEecCC
Confidence 9998754 346678999999999999999887643
No 214
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.40 E-value=1.1e-11 Score=105.26 Aligned_cols=124 Identities=15% Similarity=0.123 Sum_probs=94.2
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCC--CcEEEEcCCCCCCCCCCCccEEEecCccc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK--ECTIIEGDAEDLPFPTDYADRYVSAGSIE 189 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~--~i~~~~~d~~~~~~~~~~fD~v~~~~~l~ 189 (340)
.++.+|||+|||+|.++..+++. +..+|+|+|+++.+++.++++.... +++++++|+.+++ ++||+|+++..++
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~ 123 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLL-GAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFG 123 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCCCS
T ss_pred CCcCEEEEeeCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCCCc
Confidence 36789999999999999999887 3458999999999999999875422 6899999998864 4799999998887
Q ss_pred ccC--CHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEe
Q 019479 190 YWP--DPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRI 257 (340)
Q Consensus 190 ~~~--d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~ 257 (340)
... ....+++++.+++ |+ +++....... +.+.+.+.+++.||+...+...
T Consensus 124 ~~~~~~~~~~l~~~~~~l--~~-~~~~~~~~~~---------------~~~~~~~~l~~~g~~~~~~~~~ 175 (207)
T 1wy7_A 124 SQRKHADRPFLLKAFEIS--DV-VYSIHLAKPE---------------VRRFIEKFSWEHGFVVTHRLTT 175 (207)
T ss_dssp SSSTTTTHHHHHHHHHHC--SE-EEEEEECCHH---------------HHHHHHHHHHHTTEEEEEEEEE
T ss_pred cccCCchHHHHHHHHHhc--Cc-EEEEEeCCcC---------------CHHHHHHHHHHCCCeEEEEEEE
Confidence 764 3357889999988 44 4443311110 2445667889999987766554
No 215
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.39 E-value=4.2e-13 Score=119.22 Aligned_cols=100 Identities=19% Similarity=0.119 Sum_probs=76.5
Q ss_pred CCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC-----CCcEEE--EcCCCCCCCCCCCccEEE
Q 019479 111 FDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-----KECTII--EGDAEDLPFPTDYADRYV 183 (340)
Q Consensus 111 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~-----~~i~~~--~~d~~~~~~~~~~fD~v~ 183 (340)
..++.+|||+|||+|.++..+++. .+|+|+|+++ ++..++++... .++.++ ++|+.+++ +++||+|+
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vv 153 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVL 153 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEE
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEE
Confidence 357889999999999999999887 5899999998 54333322110 178999 99998765 67899999
Q ss_pred ecCcccccCCHH-------HHHHHHHHhcccCc--EEEEEccC
Q 019479 184 SAGSIEYWPDPQ-------RGIKEAYRVLKIGG--KACVIGPV 217 (340)
Q Consensus 184 ~~~~l~~~~d~~-------~~l~~~~~~LkpgG--~l~i~~~~ 217 (340)
+..+ ++..++. .+|+++.++||||| .+++....
T Consensus 154 sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 154 CDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp ECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred ECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 9877 5443331 37899999999999 88886544
No 216
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.39 E-value=3.9e-13 Score=121.60 Aligned_cols=103 Identities=23% Similarity=0.222 Sum_probs=81.1
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC-------CCCcEEEEcCCCC-CCCCCCCccEEEe
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-------LKECTIIEGDAED-LPFPTDYADRYVS 184 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~-------~~~i~~~~~d~~~-~~~~~~~fD~v~~ 184 (340)
.+.+|||||||+|..+..+++..+..+|+++|+++.+++.|+++.. .++++++.+|+.+ ++..+++||+|++
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 5689999999999999999988677899999999999999998853 3679999999865 2334678999998
Q ss_pred cCcccccCCH----HHHHHHHHHhcccCcEEEEEc
Q 019479 185 AGSIEYWPDP----QRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 185 ~~~l~~~~d~----~~~l~~~~~~LkpgG~l~i~~ 215 (340)
....+..++. ..+++++.++|+|||++++..
T Consensus 188 d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 188 DSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred cCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 6532211111 578999999999999999875
No 217
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.39 E-value=7.2e-13 Score=120.92 Aligned_cols=103 Identities=18% Similarity=0.160 Sum_probs=81.2
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCC--CcEEEEcCCCCCCC----CCCCccEEE
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLK--ECTIIEGDAEDLPF----PTDYADRYV 183 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~--~i~~~~~d~~~~~~----~~~~fD~v~ 183 (340)
++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|+++. ... +++++++|+.++.. ..++||+|+
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~--ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAA--GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCCcEEEcccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 5789999999999999999986 569999999999999999873 222 48999999976421 156899999
Q ss_pred ecCc----------ccccCCHHHHHHHHHHhcccCcEEEEEccC
Q 019479 184 SAGS----------IEYWPDPQRGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 184 ~~~~----------l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
+.-. .++..+...+++++.++|||||.+++....
T Consensus 231 ~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp ECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred ECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 9533 122344568999999999999998776543
No 218
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.39 E-value=4.9e-13 Score=119.48 Aligned_cols=104 Identities=21% Similarity=0.171 Sum_probs=84.6
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC-------CCCcEEEEcCCCCC-CCCCCCccEEEe
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-------LKECTIIEGDAEDL-PFPTDYADRYVS 184 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~-------~~~i~~~~~d~~~~-~~~~~~fD~v~~ 184 (340)
++.+|||||||+|..+..+++..+..+|+++|+++.+++.|+++.. .++++++.+|+.+. +...++||+|++
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 157 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEE
Confidence 5689999999999999999987667899999999999999998854 46899999998652 223578999998
Q ss_pred cCcccccCCH----HHHHHHHHHhcccCcEEEEEcc
Q 019479 185 AGSIEYWPDP----QRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 185 ~~~l~~~~d~----~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
....+..+.. ..+++++.++|||||++++...
T Consensus 158 d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 158 DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp ECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred cCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 5443322211 5899999999999999998854
No 219
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.39 E-value=3.9e-13 Score=118.71 Aligned_cols=101 Identities=15% Similarity=0.038 Sum_probs=76.5
Q ss_pred CCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC-----CCcEEE--EcCCCCCCCCCCCccEE
Q 019479 110 LFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-----KECTII--EGDAEDLPFPTDYADRY 182 (340)
Q Consensus 110 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~-----~~i~~~--~~d~~~~~~~~~~fD~v 182 (340)
...++.+|||+|||+|.++..+++. .+|+|+|+++ ++..+++.... .++.++ ++|+.+++ +++||+|
T Consensus 71 ~~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V 144 (265)
T 2oxt_A 71 YVELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVI 144 (265)
T ss_dssp SCCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEE
T ss_pred CCCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEE
Confidence 3457889999999999999998887 6899999998 53333222110 168999 99998865 6789999
Q ss_pred EecCcccccCCHH-------HHHHHHHHhcccCc--EEEEEccC
Q 019479 183 VSAGSIEYWPDPQ-------RGIKEAYRVLKIGG--KACVIGPV 217 (340)
Q Consensus 183 ~~~~~l~~~~d~~-------~~l~~~~~~LkpgG--~l~i~~~~ 217 (340)
++..+ ++..++. .+|+++.++||||| .+++....
T Consensus 145 ~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 145 MCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp EECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred EEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 99877 5444431 37899999999999 88886544
No 220
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.38 E-value=5.4e-13 Score=120.30 Aligned_cols=103 Identities=22% Similarity=0.257 Sum_probs=82.2
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC-------CCCcEEEEcCCCC-CCCCCCCccEEEe
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-------LKECTIIEGDAED-LPFPTDYADRYVS 184 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~-------~~~i~~~~~d~~~-~~~~~~~fD~v~~ 184 (340)
.+.+|||||||+|..+..+++..+..+|+++|+++.+++.|+++.. .++++++.+|+.+ ++..+++||+|++
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~ 174 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIIT 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEE
Confidence 5689999999999999999988667899999999999999998752 4689999999865 3334678999998
Q ss_pred cCcccccCC----HHHHHHHHHHhcccCcEEEEEc
Q 019479 185 AGSIEYWPD----PQRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 185 ~~~l~~~~d----~~~~l~~~~~~LkpgG~l~i~~ 215 (340)
....+..+. ...+++++.++|||||++++..
T Consensus 175 d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 175 DSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp ECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 654332211 2368999999999999999875
No 221
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.37 E-value=7.7e-13 Score=118.94 Aligned_cols=132 Identities=13% Similarity=0.018 Sum_probs=94.5
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC-------CCCcEEEEcCCCC-CCCCCCCccEEEe
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-------LKECTIIEGDAED-LPFPTDYADRYVS 184 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~-------~~~i~~~~~d~~~-~~~~~~~fD~v~~ 184 (340)
.+.+|||||||+|..+..+++..+..+|+++|+++.+++.|+++.. .++++++++|+.+ ++..+++||+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 5689999999999999999988667899999999999999998752 4689999999855 3334578999998
Q ss_pred cCcccccC-----CHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEe
Q 019479 185 AGSIEYWP-----DPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRI 257 (340)
Q Consensus 185 ~~~l~~~~-----d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~ 257 (340)
....++.. ....+++++.++|||||++++....... ... ....+.+.+++. |..+.....
T Consensus 170 d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~--~~~----------~~~~~~~~l~~~-F~~v~~~~~ 234 (296)
T 1inl_A 170 DSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFY--DIG----------WFKLAYRRISKV-FPITRVYLG 234 (296)
T ss_dssp EC----------CCSHHHHHHHHHHEEEEEEEEEECCCTTT--THH----------HHHHHHHHHHHH-CSEEEEEEE
T ss_pred cCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCccc--CHH----------HHHHHHHHHHHH-CCceEEEEe
Confidence 53322121 1258899999999999999987533110 000 123444556665 777666554
No 222
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.37 E-value=1e-12 Score=117.01 Aligned_cols=115 Identities=13% Similarity=0.034 Sum_probs=86.3
Q ss_pred CCCCEEEEEcC------ccchHHHHHHHhCC-CceEEEEeCCHHHHHHHHHhCCCCCcEE-EEcCCCCCCCCCCCccEEE
Q 019479 112 DRNMRVVDVGG------GTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEPLKECTI-IEGDAEDLPFPTDYADRYV 183 (340)
Q Consensus 112 ~~~~~vLDiGc------G~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~i~~-~~~d~~~~~~~~~~fD~v~ 183 (340)
+++.+|||+|| |+|. ..+++..+ +.+|+|+|+|+. + +++++ +++|+.++++. ++||+|+
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v---------~~v~~~i~gD~~~~~~~-~~fD~Vv 128 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V---------SDADSTLIGDCATVHTA-NKWDLII 128 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B---------CSSSEEEESCGGGCCCS-SCEEEEE
T ss_pred CCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C---------CCCEEEEECccccCCcc-CcccEEE
Confidence 57889999999 4476 44566665 589999999987 1 47889 99999887654 6799999
Q ss_pred ecCcccc-----------cCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEE
Q 019479 184 SAGSIEY-----------WPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDV 252 (340)
Q Consensus 184 ~~~~l~~-----------~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v 252 (340)
++...+. ......+++++.++|||||++++...... ..+++.+.+++.||..+
T Consensus 129 sn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~----------------~~~~l~~~l~~~GF~~v 192 (290)
T 2xyq_A 129 SDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS----------------WNADLYKLMGHFSWWTA 192 (290)
T ss_dssp ECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS----------------CCHHHHHHHTTEEEEEE
T ss_pred EcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccC----------------CHHHHHHHHHHcCCcEE
Confidence 9643221 11124789999999999999998654322 23577889999999877
Q ss_pred EEE
Q 019479 253 KLK 255 (340)
Q Consensus 253 ~~~ 255 (340)
++.
T Consensus 193 ~~~ 195 (290)
T 2xyq_A 193 FVT 195 (290)
T ss_dssp EEE
T ss_pred EEE
Confidence 766
No 223
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.37 E-value=7.4e-13 Score=118.19 Aligned_cols=101 Identities=18% Similarity=0.229 Sum_probs=81.9
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC-------------CCCCcEEEEcCCCCC-CCCCCC
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE-------------PLKECTIIEGDAEDL-PFPTDY 178 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~-------------~~~~i~~~~~d~~~~-~~~~~~ 178 (340)
.+.+|||||||+|..+..+++. +..+|+++|+++.+++.|+++. ..++++++.+|+.+. +. +++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~ 152 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRG 152 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCC
T ss_pred CCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCC
Confidence 5689999999999999999998 7789999999999999999886 346799999998542 22 577
Q ss_pred ccEEEecCcccccC--C--HHHHHHHHHHhcccCcEEEEEc
Q 019479 179 ADRYVSAGSIEYWP--D--PQRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 179 fD~v~~~~~l~~~~--d--~~~~l~~~~~~LkpgG~l~i~~ 215 (340)
||+|++....+..+ . ...+++++.++|+|||++++..
T Consensus 153 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 153 FDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp EEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 99999865432211 1 2578999999999999998874
No 224
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.36 E-value=1.1e-12 Score=115.81 Aligned_cols=93 Identities=16% Similarity=-0.003 Sum_probs=80.8
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC-------CCCcEEEEcCCCCCCCCCCCccEEEec
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-------LKECTIIEGDAEDLPFPTDYADRYVSA 185 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~-------~~~i~~~~~d~~~~~~~~~~fD~v~~~ 185 (340)
.+.+|||||||+|..+..+++. + .+|+++|+++.+++.|+++.. .++++++.+|..+.. ++||+|++.
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d 146 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCL 146 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEES
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEEC
Confidence 5689999999999999999988 7 899999999999999987753 367999999997754 779999985
Q ss_pred CcccccCCHHHHHHHHHHhcccCcEEEEEc
Q 019479 186 GSIEYWPDPQRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 186 ~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~ 215 (340)
..++..+++++.++|||||++++..
T Consensus 147 -----~~dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 147 -----QEPDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp -----SCCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred -----CCChHHHHHHHHHhcCCCcEEEEEc
Confidence 3466779999999999999998864
No 225
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.35 E-value=2e-12 Score=112.12 Aligned_cols=103 Identities=17% Similarity=0.185 Sum_probs=84.0
Q ss_pred CCCEEEEEcCccchHHHHHHHhCC-CceEEEEeCCHHHHHHHHHhC---C-CCCcEEEEcCCCC----CCCCC--CCccE
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKE---P-LKECTIIEGDAED----LPFPT--DYADR 181 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~---~-~~~i~~~~~d~~~----~~~~~--~~fD~ 181 (340)
++.+|||||||+|..+..+++.++ +.+|+++|+++.+++.|+++. . .++++++.+|+.+ ++..+ ++||+
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 567999999999999999999876 689999999999999998763 2 2468999999743 22223 68999
Q ss_pred EEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCC
Q 019479 182 YVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVY 218 (340)
Q Consensus 182 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~ 218 (340)
|++... ..+...+++++.++|+|||++++.+...
T Consensus 152 V~~d~~---~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 185 (232)
T 3cbg_A 152 IFIDAD---KRNYPRYYEIGLNLLRRGGLMVIDNVLW 185 (232)
T ss_dssp EEECSC---GGGHHHHHHHHHHTEEEEEEEEEECTTG
T ss_pred EEECCC---HHHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 998754 3456789999999999999999876543
No 226
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.34 E-value=5.4e-12 Score=111.71 Aligned_cols=126 Identities=18% Similarity=0.156 Sum_probs=96.3
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---C-CCCcEEEEcCCCCCCCCCCCccEEEecCc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---P-LKECTIIEGDAEDLPFPTDYADRYVSAGS 187 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~-~~~i~~~~~d~~~~~~~~~~fD~v~~~~~ 187 (340)
+++.+|||+|||+|.++..++.. +..+|+++|+++.+++.++++. + .++++++++|..+++ ..+.||.|+++..
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~-g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~-~~~~~D~Vi~~~p 201 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-GENIADRILMGYV 201 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-CCSCEEEEEECCC
T ss_pred CCCCEEEEecCcCcHHHHHHHHh-cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc-cccCCCEEEECCC
Confidence 57999999999999999999987 4579999999999999999773 2 356899999998865 4567999998643
Q ss_pred ccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEE
Q 019479 188 IEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVK 253 (340)
Q Consensus 188 l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~ 253 (340)
.....++..+.++||+||+|.+.+....... .....+.+.+..++.|+++..
T Consensus 202 ----~~~~~~l~~a~~~lk~gG~ih~~~~~~e~~~----------~~~~~e~i~~~~~~~g~~v~~ 253 (278)
T 3k6r_A 202 ----VRTHEFIPKALSIAKDGAIIHYHNTVPEKLM----------PREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp ----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGT----------TTTTHHHHHHHHHHTTCEEEE
T ss_pred ----CcHHHHHHHHHHHcCCCCEEEEEeeeccccc----------chhHHHHHHHHHHHcCCcEEE
Confidence 2334678889999999999876544322110 012356778888999998643
No 227
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.34 E-value=1.6e-12 Score=113.14 Aligned_cols=102 Identities=17% Similarity=0.170 Sum_probs=83.4
Q ss_pred CCCEEEEEcCccchHHHHHHHhCC-CceEEEEeCCHHHHHHHHHhC---CC-CCcEEEEcCCCCC-C-------------
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKE---PL-KECTIIEGDAEDL-P------------- 173 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~---~~-~~i~~~~~d~~~~-~------------- 173 (340)
++.+|||||||+|..+..+++.++ +.+|+++|+++.+++.|+++. .. .+++++.+|+.+. +
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 139 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWAS 139 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGT
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccc
Confidence 678999999999999999999986 689999999999999999873 22 3489999998542 1
Q ss_pred -CCC--CCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccC
Q 019479 174 -FPT--DYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 174 -~~~--~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
+++ ++||+|++.... .+...+++++.++|||||++++.+..
T Consensus 140 ~f~~~~~~fD~I~~~~~~---~~~~~~l~~~~~~L~pgG~lv~~~~~ 183 (239)
T 2hnk_A 140 DFAFGPSSIDLFFLDADK---ENYPNYYPLILKLLKPGGLLIADNVL 183 (239)
T ss_dssp TTCCSTTCEEEEEECSCG---GGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred cccCCCCCcCEEEEeCCH---HHHHHHHHHHHHHcCCCeEEEEEccc
Confidence 222 789999987543 35568899999999999999987644
No 228
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.33 E-value=2.1e-12 Score=111.39 Aligned_cols=102 Identities=13% Similarity=0.123 Sum_probs=83.7
Q ss_pred CCCEEEEEcCccchHHHHHHHhCC-CceEEEEeCCHHHHHHHHHhC---C-CCCcEEEEcCCCCC-C-CCC----CCccE
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKE---P-LKECTIIEGDAEDL-P-FPT----DYADR 181 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~---~-~~~i~~~~~d~~~~-~-~~~----~~fD~ 181 (340)
++.+|||||||+|..+..+++.++ +.+|+++|+++.+++.|+++. . ..+++++++|+.+. + +.. ++||+
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~ 148 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDV 148 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccE
Confidence 678999999999999999999876 689999999999999999763 2 25799999998542 1 111 67999
Q ss_pred EEecCcccccCCHHHHHHHHHHhcccCcEEEEEccC
Q 019479 182 YVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 182 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
|++... ..+...+++++.++|+|||++++.+..
T Consensus 149 v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 149 AVVDAD---KENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp EEECSC---STTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred EEECCC---HHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 998654 345678999999999999999987654
No 229
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.32 E-value=1.7e-12 Score=113.01 Aligned_cols=102 Identities=16% Similarity=0.153 Sum_probs=83.5
Q ss_pred CCCEEEEEcCccchHHHHHHHhCC-CceEEEEeCCHHHHHHHHHhC---CC-CCcEEEEcCCCCC-C-C-----CCCCcc
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKE---PL-KECTIIEGDAEDL-P-F-----PTDYAD 180 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~---~~-~~i~~~~~d~~~~-~-~-----~~~~fD 180 (340)
++.+|||||||+|..+..+++..| +.+|+++|+++.+++.|+++. .. ++++++.+|+.+. + + ..++||
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 149 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYD 149 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcC
Confidence 578999999999999999999987 689999999999999999763 22 4689999998652 2 1 157899
Q ss_pred EEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccC
Q 019479 181 RYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 181 ~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
+|++... ..+...+++++.++|||||++++.+..
T Consensus 150 ~I~~d~~---~~~~~~~l~~~~~~L~pGG~lv~d~~~ 183 (237)
T 3c3y_A 150 FGFVDAD---KPNYIKYHERLMKLVKVGGIVAYDNTL 183 (237)
T ss_dssp EEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECTT
T ss_pred EEEECCc---hHHHHHHHHHHHHhcCCCeEEEEecCC
Confidence 9998643 235578999999999999999887643
No 230
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.31 E-value=9.8e-12 Score=107.34 Aligned_cols=134 Identities=9% Similarity=-0.051 Sum_probs=99.7
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC--CCCcEEEEcCCCCCCCCCCCccEEEecCcccc
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP--LKECTIIEGDAEDLPFPTDYADRYVSAGSIEY 190 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~--~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 190 (340)
.+.+|||||||.|-++..++...|..+|+++|+++.+++.+++++. ..+.++...|...-+ +.++||+|++.-++++
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~-p~~~~DvaL~lkti~~ 210 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR-LDEPADVTLLLKTLPC 210 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC-CCSCCSEEEETTCHHH
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC-CCCCcchHHHHHHHHH
Confidence 5789999999999999999998889999999999999999998742 244788899986644 5677999999999999
Q ss_pred cCCHH--HHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEE
Q 019479 191 WPDPQ--RGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKL 254 (340)
Q Consensus 191 ~~d~~--~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~ 254 (340)
+++.. ..+ ++.+.|+|+|.++-... ..-......+... -.+.|++.+.+.|....+.
T Consensus 211 Le~q~kg~g~-~ll~aL~~~~vvVSfp~-ksl~Grs~gm~~~-----Y~~~~e~~~~~~g~~~~~~ 269 (281)
T 3lcv_B 211 LETQQRGSGW-EVIDIVNSPNIVVTFPT-KSLGQRSKGMFQN-----YSQSFESQARERSCRIQRL 269 (281)
T ss_dssp HHHHSTTHHH-HHHHHSSCSEEEEEEEC-C-------CHHHH-----HHHHHHHHHHHHTCCEEEE
T ss_pred hhhhhhHHHH-HHHHHhCCCCEEEeccc-hhhcCCCcchhhH-----HHHHHHHHHHhcCCceeee
Confidence 97764 455 89999999988865543 1100000111111 1467888888899954443
No 231
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.31 E-value=1.8e-12 Score=116.78 Aligned_cols=104 Identities=18% Similarity=0.111 Sum_probs=75.5
Q ss_pred CCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeC----CHHHHHHHH-HhCCCCCcEEEEc-CCCCCCCCCCCccEE
Q 019479 109 DLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQ----SPHQLAKAK-QKEPLKECTIIEG-DAEDLPFPTDYADRY 182 (340)
Q Consensus 109 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~----s~~~~~~a~-~~~~~~~i~~~~~-d~~~~~~~~~~fD~v 182 (340)
...+++.+|||+|||+|.++..+++. .+|+|+|+ ++.+++.+. +....+++.++++ |+..++ .++||+|
T Consensus 78 ~~~~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~--~~~fD~V 152 (305)
T 2p41_A 78 NLVTPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIP--PERCDTL 152 (305)
T ss_dssp TSSCCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSC--CCCCSEE
T ss_pred CCCCCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCC--cCCCCEE
Confidence 33457889999999999999999887 48999999 554432221 1112256899999 887664 5689999
Q ss_pred EecCccc---ccCCHH---HHHHHHHHhcccCcEEEEEccC
Q 019479 183 VSAGSIE---YWPDPQ---RGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 183 ~~~~~l~---~~~d~~---~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
++..+.+ +..|.. .+|+++.++|||||.+++....
T Consensus 153 ~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~ 193 (305)
T 2p41_A 153 LCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLN 193 (305)
T ss_dssp EECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESC
T ss_pred EECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 9976653 222222 4788999999999998886443
No 232
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.30 E-value=1.5e-12 Score=116.40 Aligned_cols=86 Identities=22% Similarity=0.341 Sum_probs=69.2
Q ss_pred HHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC----CCcEEEEcCCCCCCC
Q 019479 99 DMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL----KECTIIEGDAEDLPF 174 (340)
Q Consensus 99 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~----~~i~~~~~d~~~~~~ 174 (340)
.+...++..+.. .++.+|||||||+|.++..+++. +.+|+|+|+++.+++.++++... ++++++++|+.+.++
T Consensus 15 ~i~~~i~~~~~~-~~~~~VLDiG~G~G~lt~~L~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~ 91 (285)
T 1zq9_A 15 LIINSIIDKAAL-RPTDVVLEVGPGTGNMTVKLLEK--AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDL 91 (285)
T ss_dssp HHHHHHHHHTCC-CTTCEEEEECCTTSTTHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCC
T ss_pred HHHHHHHHhcCC-CCCCEEEEEcCcccHHHHHHHhh--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccc
Confidence 345555555544 46789999999999999999998 67999999999999999987432 579999999987765
Q ss_pred CCCCccEEEecCccc
Q 019479 175 PTDYADRYVSAGSIE 189 (340)
Q Consensus 175 ~~~~fD~v~~~~~l~ 189 (340)
+ +||+|+++..++
T Consensus 92 ~--~fD~vv~nlpy~ 104 (285)
T 1zq9_A 92 P--FFDTCVANLPYQ 104 (285)
T ss_dssp C--CCSEEEEECCGG
T ss_pred h--hhcEEEEecCcc
Confidence 4 699999975444
No 233
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.28 E-value=2.5e-11 Score=114.72 Aligned_cols=128 Identities=16% Similarity=0.175 Sum_probs=96.3
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC--CCCcEEEEcCCCCCC--CCCCCccEEEec--
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP--LKECTIIEGDAEDLP--FPTDYADRYVSA-- 185 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~--~~~i~~~~~d~~~~~--~~~~~fD~v~~~-- 185 (340)
.++.+|||+|||+|..+..+++..++.+|+++|+++.+++.++++.. .-++.++++|+.+.+ +++++||+|++.
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~P 324 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAP 324 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEECC
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeCC
Confidence 47889999999999999999999777899999999999999987632 125789999998765 455789999972
Q ss_pred ----CcccccCCH----------------HHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHH
Q 019479 186 ----GSIEYWPDP----------------QRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQ 245 (340)
Q Consensus 186 ----~~l~~~~d~----------------~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 245 (340)
.++++.++. ..+++++.+.|||||++++.+...... .+.+.+...++
T Consensus 325 csg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~-------------ene~~v~~~l~ 391 (429)
T 1sqg_A 325 CSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPE-------------ENSLQIKAFLQ 391 (429)
T ss_dssp CCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGG-------------GTHHHHHHHHH
T ss_pred CCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChh-------------hHHHHHHHHHH
Confidence 333444442 378999999999999999887543211 13445556666
Q ss_pred HC-CCcEE
Q 019479 246 KA-GFKDV 252 (340)
Q Consensus 246 ~a-GF~~v 252 (340)
+. +|+.+
T Consensus 392 ~~~~~~~~ 399 (429)
T 1sqg_A 392 RTADAELC 399 (429)
T ss_dssp HCTTCEEC
T ss_pred hCCCCEEe
Confidence 64 57654
No 234
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.27 E-value=2.6e-11 Score=115.72 Aligned_cols=105 Identities=17% Similarity=0.196 Sum_probs=83.8
Q ss_pred CCCEEEEEcCccchHHHHHHHhCC-CceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCCCCC-CCCCccEEEec--
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAEDLPF-PTDYADRYVSA-- 185 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~~~~-~~~~fD~v~~~-- 185 (340)
++.+|||+|||+|..+..+++..+ ..+|+++|+++.+++.++++. ...++.++++|+.+++. .+++||.|++.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 688999999999999999999864 479999999999999998763 34679999999987653 45689999983
Q ss_pred ----CcccccCC----------------HHHHHHHHHHhcccCcEEEEEccC
Q 019479 186 ----GSIEYWPD----------------PQRGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 186 ----~~l~~~~d----------------~~~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
.++...++ ...+|+++.++|||||+|++.+..
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCT 248 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 12222222 136899999999999999987654
No 235
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.27 E-value=4.4e-11 Score=102.35 Aligned_cols=139 Identities=14% Similarity=-0.047 Sum_probs=96.3
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC--CCCCcEEEEcCCCCCCCCCCCccEEEecCccc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE--PLKECTIIEGDAEDLPFPTDYADRYVSAGSIE 189 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~--~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~ 189 (340)
.++.+|||||||+|.++..++ +..+|+|+|+++.+++.++++. ...+.++...|....+.+ ++||+|++.-++|
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~-~~~DvvLllk~lh 179 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPA-EAGDLALIFKLLP 179 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCC-CBCSEEEEESCHH
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCC-CCcchHHHHHHHH
Confidence 367899999999999999877 6899999999999999999873 236678899999876644 4799999999999
Q ss_pred ccCCHH-HHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEeCCcc
Q 019479 190 YWPDPQ-RGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRIGPKW 261 (340)
Q Consensus 190 ~~~d~~-~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~~~ 261 (340)
++++.+ ...-++.+.|+++|.++-.. ...-......+.. .-...|++.+ ...+.+++...++...
T Consensus 180 ~LE~q~~~~~~~ll~aL~~~~vvVsfP-tksl~Gr~~gm~~-----~Y~~~~e~~~-~~~~~~~~~~~~~nEl 245 (253)
T 3frh_A 180 LLEREQAGSAMALLQSLNTPRMAVSFP-TRSLGGRGKGMEA-----NYAAWFEGGL-PAEFEIEDKKTIGTEL 245 (253)
T ss_dssp HHHHHSTTHHHHHHHHCBCSEEEEEEE-CC----------------CHHHHHHHHS-CTTEEEEEEEEETTEE
T ss_pred HhhhhchhhHHHHHHHhcCCCEEEEcC-hHHhcCCCcchhh-----HHHHHHHHHh-hccchhhhheecCceE
Confidence 996654 33448888999987765543 2110000000000 1123444444 5667777777776443
No 236
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.27 E-value=7.4e-12 Score=118.51 Aligned_cols=129 Identities=12% Similarity=0.113 Sum_probs=96.3
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCC-ceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCCCC-CCCCCccEEEec-
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDA-KNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAEDLP-FPTDYADRYVSA- 185 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~~~-~~~~~fD~v~~~- 185 (340)
.++.+|||+|||+|..+..+++..++ .+|+++|+|+.+++.++++. ... +.++++|+.+++ ...++||+|++.
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~~~~~FD~Il~D~ 178 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEAFGTYFHRVLLDA 178 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHHHCSCEEEEEEEC
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhhccccCCEEEECC
Confidence 47889999999999999999998754 79999999999999998763 334 889999987654 245789999962
Q ss_pred -----CcccccCCH----------------HHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHH
Q 019479 186 -----GSIEYWPDP----------------QRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWF 244 (340)
Q Consensus 186 -----~~l~~~~d~----------------~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 244 (340)
.++..-++. ..+|+++.++|||||+|+..+..... ..+.+.+..++
T Consensus 179 PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~-------------eEne~vv~~~l 245 (464)
T 3m6w_A 179 PCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAP-------------EENEGVVAHFL 245 (464)
T ss_dssp CCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG-------------GGTHHHHHHHH
T ss_pred CcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCch-------------hcCHHHHHHHH
Confidence 222222222 57899999999999999887654321 11456666777
Q ss_pred HHC-CCcEEEE
Q 019479 245 QKA-GFKDVKL 254 (340)
Q Consensus 245 ~~a-GF~~v~~ 254 (340)
++. +|+.+.+
T Consensus 246 ~~~~~~~l~~~ 256 (464)
T 3m6w_A 246 KAHPEFRLEDA 256 (464)
T ss_dssp HHCTTEEEECC
T ss_pred HHCCCcEEEec
Confidence 776 5776654
No 237
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.26 E-value=1.5e-11 Score=114.60 Aligned_cols=132 Identities=13% Similarity=0.020 Sum_probs=93.1
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCC--CcEEEEcCCCCC-C-C--CCCCccEEE
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLK--ECTIIEGDAEDL-P-F--PTDYADRYV 183 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~--~i~~~~~d~~~~-~-~--~~~~fD~v~ 183 (340)
++.+|||+|||+|.++..+++. ...+|+++|+|+.+++.|+++. ... +++++++|+.+. + . ...+||+|+
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~-ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMG-GAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHT-TBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEEeeccCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 6789999999999999999986 2358999999999999999873 223 799999998652 2 1 245799999
Q ss_pred ecCcc-----cccCCH----HHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEE
Q 019479 184 SAGSI-----EYWPDP----QRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKL 254 (340)
Q Consensus 184 ~~~~l-----~~~~d~----~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~ 254 (340)
+.-.. .+..+. ..+++++.++|+|||.|++........ ... -.+.+.+.+.++|.++++.
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~-~~~----------~~~~i~~~~~~~g~~~~~~ 359 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMT-VSQ----------FKKQIEKGFGKQKHTYLDL 359 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC-HHH----------HHHHHHHHHTTCCCEEEEE
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCC-HHH----------HHHHHHHHHHHcCCcEEEe
Confidence 85433 233333 357788899999999998886443210 000 0234556677888884443
Q ss_pred EE
Q 019479 255 KR 256 (340)
Q Consensus 255 ~~ 256 (340)
..
T Consensus 360 ~~ 361 (385)
T 2b78_A 360 QQ 361 (385)
T ss_dssp EC
T ss_pred CC
Confidence 33
No 238
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.24 E-value=8.5e-12 Score=117.92 Aligned_cols=131 Identities=13% Similarity=0.131 Sum_probs=98.4
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCC-ceEEEEeCCHHHHHHHHHh---CCCCCcEEEEcCCCCCC-CCCCCccEEEecC
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDA-KNVTILDQSPHQLAKAKQK---EPLKECTIIEGDAEDLP-FPTDYADRYVSAG 186 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~g~D~s~~~~~~a~~~---~~~~~i~~~~~d~~~~~-~~~~~fD~v~~~~ 186 (340)
.++.+|||+|||+|..+..+++..++ .+|+++|+++.+++.++++ ....++.++++|..+++ ..+++||+|++.-
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~Da 183 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVDA 183 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEEC
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEECC
Confidence 47889999999999999999987654 7999999999999999876 33467899999987654 2357899999843
Q ss_pred c---cccc-CCH------------------HHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHH
Q 019479 187 S---IEYW-PDP------------------QRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWF 244 (340)
Q Consensus 187 ~---l~~~-~d~------------------~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 244 (340)
- ...+ .++ ..+|+++.++|||||+|+..+..... ..+.+.+..++
T Consensus 184 PCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~-------------eEne~vv~~~l 250 (456)
T 3m4x_A 184 PCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAP-------------EENEEIISWLV 250 (456)
T ss_dssp CCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCG-------------GGTHHHHHHHH
T ss_pred CCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeeccc-------------ccCHHHHHHHH
Confidence 2 1111 111 16799999999999999887654321 12567778888
Q ss_pred HHCCCcEEEEE
Q 019479 245 QKAGFKDVKLK 255 (340)
Q Consensus 245 ~~aGF~~v~~~ 255 (340)
++.||+.+.+.
T Consensus 251 ~~~~~~l~~~~ 261 (456)
T 3m4x_A 251 ENYPVTIEEIP 261 (456)
T ss_dssp HHSSEEEECCC
T ss_pred HhCCCEEEecc
Confidence 99887766543
No 239
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.22 E-value=1.2e-11 Score=115.09 Aligned_cols=132 Identities=16% Similarity=-0.003 Sum_probs=90.7
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCC--CcEEEEcCCCCCC-CCCCCccEEEecCccc
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLK--ECTIIEGDAEDLP-FPTDYADRYVSAGSIE 189 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~--~i~~~~~d~~~~~-~~~~~fD~v~~~~~l~ 189 (340)
++.+|||+|||+|.++..+++. +..|+++|+|+.+++.|+++.... ..++.++|+.+.. ...+.||+|++.-...
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~--ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f 291 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARK--GAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTL 291 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCC
T ss_pred CCCeEEEcccchhHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcC
Confidence 5899999999999999999987 666999999999999999874221 1357788886531 1133499999864432
Q ss_pred c---------cCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEe
Q 019479 190 Y---------WPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRI 257 (340)
Q Consensus 190 ~---------~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~ 257 (340)
. ..+...+++.+.++|||||+|++........ ...+ .+.+.+.+.++|.....+...
T Consensus 292 ~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~-~~~f----------~~~v~~a~~~~g~~~~i~~~~ 357 (393)
T 4dmg_A 292 VKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLR-LEDL----------LEVARRAAADLGRRLRVHRVT 357 (393)
T ss_dssp CSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC-HHHH----------HHHHHHHHHHHTCCEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCC-HHHH----------HHHHHHHHHHhCCeEEEEEEc
Confidence 1 1233478899999999999998765443211 0000 134455666777765444443
No 240
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.22 E-value=4.6e-11 Score=111.79 Aligned_cols=131 Identities=17% Similarity=0.023 Sum_probs=94.9
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CC-C-CcEEEEcCCCCCCC----CCCCccEEE
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PL-K-ECTIIEGDAEDLPF----PTDYADRYV 183 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~-~-~i~~~~~d~~~~~~----~~~~fD~v~ 183 (340)
++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.|+++. .. . +++++++|+.+... ...+||+|+
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~-g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMG-GCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 6789999999999999999987 2469999999999999999873 22 3 78999999966421 146799999
Q ss_pred ecCcc---------cccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEE
Q 019479 184 SAGSI---------EYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKL 254 (340)
Q Consensus 184 ~~~~l---------~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~ 254 (340)
+.-.. ....+...++.++.+.|+|||.+++........ ... ..+.+.+.+.++|+....+
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~~~----------~~~~i~~~~~~~g~~~~~i 367 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMT-SDL----------FQKIIADAAIDAGRDVQFI 367 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCC-HHH----------HHHHHHHHHHHHTCCEEEE
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCC-HHH----------HHHHHHHHHHHcCCeEEEE
Confidence 96322 223455688999999999999998876433211 000 1234556777888665444
Q ss_pred E
Q 019479 255 K 255 (340)
Q Consensus 255 ~ 255 (340)
.
T Consensus 368 ~ 368 (396)
T 3c0k_A 368 E 368 (396)
T ss_dssp E
T ss_pred E
Confidence 3
No 241
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.22 E-value=2.3e-11 Score=113.24 Aligned_cols=131 Identities=20% Similarity=0.075 Sum_probs=94.6
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCCCCC----CCCCccEEEec
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAEDLPF----PTDYADRYVSA 185 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~~~~----~~~~fD~v~~~ 185 (340)
++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.|+++. ...+++++++|+.+... ...+||+|++.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 5789999999999999999998 679999999999999999873 33458999999976421 15689999985
Q ss_pred Ccccc---------cCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEE
Q 019479 186 GSIEY---------WPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKR 256 (340)
Q Consensus 186 ~~l~~---------~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~ 256 (340)
-.... ..+...++.++.++|+|||.+++........ ... -.+.+.+.+.++|.....+..
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~~~----------~~~~i~~~~~~~g~~~~~i~~ 355 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMT-EPL----------FYAMVAEAAQDAHRLLRVVEK 355 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC-HHH----------HHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCC-HHH----------HHHHHHHHHHHcCCeEEEEEc
Confidence 43211 1234578999999999999999886543211 000 023455677788865444433
No 242
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.22 E-value=4.4e-11 Score=109.37 Aligned_cols=119 Identities=20% Similarity=0.225 Sum_probs=90.8
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CC-CCcEEEEcCCCCCCCCCCCccEEEecCc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PL-KECTIIEGDAEDLPFPTDYADRYVSAGS 187 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~-~~i~~~~~d~~~~~~~~~~fD~v~~~~~ 187 (340)
.++.+|||+|||+|.++.. ++ ++.+|+++|+|+.+++.++++. .. .+++++++|+.+.. ++||+|++...
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP 267 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLP 267 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCT
T ss_pred CCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCc
Confidence 3688999999999999999 77 4789999999999999999873 22 57999999998765 78999998632
Q ss_pred ccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHC-CCcEEEEEEe
Q 019479 188 IEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKA-GFKDVKLKRI 257 (340)
Q Consensus 188 l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a-GF~~v~~~~~ 257 (340)
.. ...+++.+.++|+|||.+++.+.... .+...+.++++ ||+++.+...
T Consensus 268 ~~----~~~~l~~~~~~L~~gG~l~~~~~~~~-----------------~~~~~~~l~~~~~~~i~~~~~v 317 (336)
T 2yx1_A 268 KF----AHKFIDKALDIVEEGGVIHYYTIGKD-----------------FDKAIKLFEKKCDCEVLEKRIV 317 (336)
T ss_dssp TT----GGGGHHHHHHHEEEEEEEEEEEEESS-----------------SHHHHHHHHHHSEEEEEEEEEE
T ss_pred Hh----HHHHHHHHHHHcCCCCEEEEEEeecC-----------------chHHHHHHHHhcCCcEEEEEEE
Confidence 21 23789999999999999988765443 12334455555 7776555444
No 243
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.21 E-value=1.9e-10 Score=108.72 Aligned_cols=137 Identities=21% Similarity=0.204 Sum_probs=97.4
Q ss_pred HHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCC---
Q 019479 98 EDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAED--- 171 (340)
Q Consensus 98 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~--- 171 (340)
+.+...+++.+.. .++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++. ...|++|+++|+.+
T Consensus 272 e~l~~~~~~~l~~-~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~ 348 (433)
T 1uwv_A 272 QKMVARALEWLDV-QPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVT 348 (433)
T ss_dssp HHHHHHHHHHHTC-CTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCS
T ss_pred HHHHHHHHHhhcC-CCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhh
Confidence 3445555554443 36789999999999999999987 689999999999999999773 33589999999977
Q ss_pred -CCCCCCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCc
Q 019479 172 -LPFPTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFK 250 (340)
Q Consensus 172 -~~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~ 250 (340)
+++.+++||+|+++--.... ..+++.+.+ ++|++.+++.... . +...-...|.+.||+
T Consensus 349 ~~~~~~~~fD~Vv~dPPr~g~---~~~~~~l~~-~~p~~ivyvsc~p--~---------------tlard~~~l~~~Gy~ 407 (433)
T 1uwv_A 349 KQPWAKNGFDKVLLDPARAGA---AGVMQQIIK-LEPIRIVYVSCNP--A---------------TLARDSEALLKAGYT 407 (433)
T ss_dssp SSGGGTTCCSEEEECCCTTCC---HHHHHHHHH-HCCSEEEEEESCH--H---------------HHHHHHHHHHHTTCE
T ss_pred hhhhhcCCCCEEEECCCCccH---HHHHHHHHh-cCCCeEEEEECCh--H---------------HHHhhHHHHHHCCcE
Confidence 23456789999985443322 245555543 6888888776421 0 111223466778999
Q ss_pred EEEEEEeC
Q 019479 251 DVKLKRIG 258 (340)
Q Consensus 251 ~v~~~~~~ 258 (340)
..++..+.
T Consensus 408 ~~~~~~~d 415 (433)
T 1uwv_A 408 IARLAMLD 415 (433)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 98877764
No 244
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.19 E-value=1.2e-11 Score=108.04 Aligned_cols=107 Identities=14% Similarity=0.166 Sum_probs=76.0
Q ss_pred HHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC-CCCcEEEEcCCCCCCCCC
Q 019479 98 EDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-LKECTIIEGDAEDLPFPT 176 (340)
Q Consensus 98 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~-~~~i~~~~~d~~~~~~~~ 176 (340)
..+...++..+.. .++.+|||||||+|.++..+++. +.+|+|+|+++.+++.++++.. .++++++++|+.++++++
T Consensus 16 ~~~~~~i~~~~~~-~~~~~VLDiG~G~G~lt~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~ 92 (244)
T 1qam_A 16 KHNIDKIMTNIRL-NEHDNIFEIGSGKGHFTLELVQR--CNFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPK 92 (244)
T ss_dssp HHHHHHHHTTCCC-CTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCS
T ss_pred HHHHHHHHHhCCC-CCCCEEEEEeCCchHHHHHHHHc--CCeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCccc
Confidence 3455666666654 46889999999999999999998 5899999999999999998854 368999999998887664
Q ss_pred -CCccEEEecCcccccCCHHHHHHHHHHhcccCcEE
Q 019479 177 -DYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKA 211 (340)
Q Consensus 177 -~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l 211 (340)
..| .|+++-.+ ++. ..++.++.+....++.+
T Consensus 93 ~~~~-~vv~nlPy-~~~--~~~l~~~l~~~~~~~~~ 124 (244)
T 1qam_A 93 NQSY-KIFGNIPY-NIS--TDIIRKIVFDSIADEIY 124 (244)
T ss_dssp SCCC-EEEEECCG-GGH--HHHHHHHHHSCCCSEEE
T ss_pred CCCe-EEEEeCCc-ccC--HHHHHHHHhcCCCCeEE
Confidence 345 45554433 332 23444444443333333
No 245
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.18 E-value=3.6e-11 Score=112.55 Aligned_cols=106 Identities=20% Similarity=0.075 Sum_probs=83.2
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCC-CcEEEEcCCCCCCC----CCCCccEEE
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLK-ECTIIEGDAEDLPF----PTDYADRYV 183 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~-~i~~~~~d~~~~~~----~~~~fD~v~ 183 (340)
+++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.|+++. ... +++++++|+.+... ..++||+|+
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi 294 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVV 294 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEE
Confidence 36889999999999999999987 4469999999999999999873 223 78999999866421 256899999
Q ss_pred ecCcccc---------cCCHHHHHHHHHHhcccCcEEEEEccCC
Q 019479 184 SAGSIEY---------WPDPQRGIKEAYRVLKIGGKACVIGPVY 218 (340)
Q Consensus 184 ~~~~l~~---------~~d~~~~l~~~~~~LkpgG~l~i~~~~~ 218 (340)
+.-.... ..+...++.++.++|+|||.+++.....
T Consensus 295 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 295 LDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp ECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 9543221 1344578999999999999998876543
No 246
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.16 E-value=5.8e-11 Score=109.01 Aligned_cols=136 Identities=16% Similarity=0.229 Sum_probs=100.2
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCC-----ceEEEEeCCHHHHHHHHHhCC--CCCcEEEEcCCCCCCCCCCCccEEEec
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDA-----KNVTILDQSPHQLAKAKQKEP--LKECTIIEGDAEDLPFPTDYADRYVSA 185 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~-----~~v~g~D~s~~~~~~a~~~~~--~~~i~~~~~d~~~~~~~~~~fD~v~~~ 185 (340)
++.+|||+|||+|.++..+++..+. .+++|+|+++.+++.|+.+.. ..++.++++|.... ...++||+|+++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~-~~~~~fD~Ii~N 208 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLAN-LLVDPVDVVISD 208 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSC-CCCCCEEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCc-cccCCccEEEEC
Confidence 5689999999999999999887643 789999999999999997621 12678999998663 245789999999
Q ss_pred CcccccCCHH------------------HHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHC
Q 019479 186 GSIEYWPDPQ------------------RGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKA 247 (340)
Q Consensus 186 ~~l~~~~d~~------------------~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 247 (340)
-.++++++.+ .++.++.+.|||||+++++.+.. ... -.....+.+++.+.
T Consensus 209 PPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~---~~~---------~~~~~~ir~~l~~~ 276 (344)
T 2f8l_A 209 LPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA---MFG---------TSDFAKVDKFIKKN 276 (344)
T ss_dssp CCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG---GGG---------STTHHHHHHHHHHH
T ss_pred CCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch---hcC---------CchHHHHHHHHHhC
Confidence 8876664332 57999999999999998886532 110 11357788888888
Q ss_pred CCcEEEEEEeCCccc
Q 019479 248 GFKDVKLKRIGPKWY 262 (340)
Q Consensus 248 GF~~v~~~~~~~~~~ 262 (340)
|+.. .+..+....+
T Consensus 277 ~~~~-~ii~lp~~~F 290 (344)
T 2f8l_A 277 GHIE-GIIKLPETLF 290 (344)
T ss_dssp EEEE-EEEECCGGGS
T ss_pred CeEE-EeeeCChhhc
Confidence 7643 3334443333
No 247
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=99.14 E-value=1.1e-09 Score=100.64 Aligned_cols=149 Identities=18% Similarity=0.191 Sum_probs=100.2
Q ss_pred CCCEEEEEcCccchHHHHHH--------HhC-------CCceEEEEeCCHHHHHHHHHhCCC---------------CC-
Q 019479 113 RNMRVVDVGGGTGFTTLGIV--------KHV-------DAKNVTILDQSPHQLAKAKQKEPL---------------KE- 161 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~--------~~~-------~~~~v~g~D~s~~~~~~a~~~~~~---------------~~- 161 (340)
.+.+|+|+|||+|.++..+. +++ |..+|..-|+-...-...=+.+.. .+
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBC
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCc
Confidence 46899999999999988872 222 568999999865443222111110 01
Q ss_pred --cEEEEcCCCCCCCCCCCccEEEecCcccccC--------------------------------------CHHHHHHHH
Q 019479 162 --CTIIEGDAEDLPFPTDYADRYVSAGSIEYWP--------------------------------------DPQRGIKEA 201 (340)
Q Consensus 162 --i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~--------------------------------------d~~~~l~~~ 201 (340)
+.-+.+.+..-.++++++|+|+++.++||+. |...+|+..
T Consensus 132 ~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 132 YFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp SEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2234556655568899999999999999986 334578899
Q ss_pred HHhcccCcEEEEEccCCCch-----------h---HhhHhhhH----------------hhcCCCHHHHHHHHH-HCCCc
Q 019479 202 YRVLKIGGKACVIGPVYPTF-----------W---LSRFFADV----------------WMLFPKEEEYIEWFQ-KAGFK 250 (340)
Q Consensus 202 ~~~LkpgG~l~i~~~~~~~~-----------~---~~~~~~~~----------------~~~~~~~~~~~~~l~-~aGF~ 250 (340)
++.|+|||++++......+. + +...+.++ ...+++.+++.+.++ +.||+
T Consensus 212 a~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~ 291 (374)
T 3b5i_A 212 AAEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFA 291 (374)
T ss_dssp HHHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEE
T ss_pred HHHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcE
Confidence 99999999999885543321 0 11111110 112578999999998 59999
Q ss_pred EEEEEEeCCcc
Q 019479 251 DVKLKRIGPKW 261 (340)
Q Consensus 251 ~v~~~~~~~~~ 261 (340)
+..++.....|
T Consensus 292 I~~le~~~~~~ 302 (374)
T 3b5i_A 292 IDKLVVYKGGS 302 (374)
T ss_dssp EEEEEEEECCC
T ss_pred EEEEEEEeecC
Confidence 98887765443
No 248
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.14 E-value=6.1e-11 Score=118.32 Aligned_cols=104 Identities=19% Similarity=0.163 Sum_probs=82.7
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CC--CCcEEEEcCCCC-CCCCCCCccEEEecC
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PL--KECTIIEGDAED-LPFPTDYADRYVSAG 186 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~--~~i~~~~~d~~~-~~~~~~~fD~v~~~~ 186 (340)
++.+|||+|||+|.++..++.. +..+|+++|+|+.+++.++++. .. .+++++++|+.+ ++...++||+|++.-
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~-ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLG-GARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred CCCcEEEeeechhHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 6889999999999999998885 3457999999999999999872 22 479999999976 333457899999854
Q ss_pred c-----------ccccCCHHHHHHHHHHhcccCcEEEEEccC
Q 019479 187 S-----------IEYWPDPQRGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 187 ~-----------l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
. .....+...+++++.++|+|||+|++....
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 2 223344567899999999999999977643
No 249
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=99.11 E-value=6.2e-10 Score=102.47 Aligned_cols=148 Identities=14% Similarity=0.123 Sum_probs=102.0
Q ss_pred CCEEEEEcCccchHHHHHHHh-----------------CCCceEEEEeCC-----------HHHHHHHHHhCC-CCCcEE
Q 019479 114 NMRVVDVGGGTGFTTLGIVKH-----------------VDAKNVTILDQS-----------PHQLAKAKQKEP-LKECTI 164 (340)
Q Consensus 114 ~~~vLDiGcG~G~~~~~l~~~-----------------~~~~~v~g~D~s-----------~~~~~~a~~~~~-~~~i~~ 164 (340)
..+|+|+||++|.++..+... .|..+|+..|+- +.+.+.+++... ..+..|
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 678999999999999887765 356889999996 455554444322 123355
Q ss_pred EEcC---CCCCCCCCCCccEEEecCcccccCCHH---------------------------------------HHHHHHH
Q 019479 165 IEGD---AEDLPFPTDYADRYVSAGSIEYWPDPQ---------------------------------------RGIKEAY 202 (340)
Q Consensus 165 ~~~d---~~~~~~~~~~fD~v~~~~~l~~~~d~~---------------------------------------~~l~~~~ 202 (340)
+.+. +..-.++++++|+|+++.++||+.+.. .+|+..+
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra 212 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHS 212 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5544 444568899999999999999986542 1266668
Q ss_pred HhcccCcEEEEEccCCCch--------hHhhHhhhH----------------hhcCCCHHHHHHHHHHC-CCcEEEEEEe
Q 019479 203 RVLKIGGKACVIGPVYPTF--------WLSRFFADV----------------WMLFPKEEEYIEWFQKA-GFKDVKLKRI 257 (340)
Q Consensus 203 ~~LkpgG~l~i~~~~~~~~--------~~~~~~~~~----------------~~~~~~~~~~~~~l~~a-GF~~v~~~~~ 257 (340)
+.|+|||++++........ .+...+.++ ...+++.++++..++++ +|++.+++.+
T Consensus 213 ~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~le~~ 292 (384)
T 2efj_A 213 EELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLETF 292 (384)
T ss_dssp HHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEEEEE
T ss_pred HHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEEEEE
Confidence 9999999999986554433 222222111 12267899999999997 5888887766
Q ss_pred CCcc
Q 019479 258 GPKW 261 (340)
Q Consensus 258 ~~~~ 261 (340)
...|
T Consensus 293 ~~~~ 296 (384)
T 2efj_A 293 NAPY 296 (384)
T ss_dssp EEET
T ss_pred eecc
Confidence 4333
No 250
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.09 E-value=1.9e-10 Score=108.26 Aligned_cols=129 Identities=19% Similarity=0.149 Sum_probs=92.8
Q ss_pred HHHhccccCCCCCCCEEEEEcCccchHHHHHHHhC-CCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCc
Q 019479 101 RDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYA 179 (340)
Q Consensus 101 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~f 179 (340)
...++..+.. .++.+|||+|||+|.++..+++++ +..+++|+|+++.+++.| .+++++++|+.+.. ..++|
T Consensus 28 ~~~~~~~~~~-~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a------~~~~~~~~D~~~~~-~~~~f 99 (421)
T 2ih2_A 28 VDFMVSLAEA-PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP------PWAEGILADFLLWE-PGEAF 99 (421)
T ss_dssp HHHHHHHCCC-CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC------TTEEEEESCGGGCC-CSSCE
T ss_pred HHHHHHhhcc-CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC------CCCcEEeCChhhcC-ccCCC
Confidence 3334443332 356799999999999999999876 568999999999998776 57899999997754 34679
Q ss_pred cEEEecCcccccC----------CH-------------------HHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhH
Q 019479 180 DRYVSAGSIEYWP----------DP-------------------QRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADV 230 (340)
Q Consensus 180 D~v~~~~~l~~~~----------d~-------------------~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~ 230 (340)
|+|+++--..... +. ..+++++.++|+|||+++++.+.. +..
T Consensus 100 D~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~---~l~------ 170 (421)
T 2ih2_A 100 DLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPAT---WLV------ 170 (421)
T ss_dssp EEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGG---GGT------
T ss_pred CEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChH---Hhc------
Confidence 9999963332211 11 156889999999999998886532 100
Q ss_pred hhcCCCHHHHHHHHHHCCC
Q 019479 231 WMLFPKEEEYIEWFQKAGF 249 (340)
Q Consensus 231 ~~~~~~~~~~~~~l~~aGF 249 (340)
....+.+++.+.+.|+
T Consensus 171 ---~~~~~~lr~~l~~~~~ 186 (421)
T 2ih2_A 171 ---LEDFALLREFLAREGK 186 (421)
T ss_dssp ---CGGGHHHHHHHHHHSE
T ss_pred ---CccHHHHHHHHHhcCC
Confidence 0124567788888887
No 251
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.08 E-value=8.8e-13 Score=115.34 Aligned_cols=101 Identities=20% Similarity=0.202 Sum_probs=76.1
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC-CCCcEEEEcCCCCCCCCC-CCccEEEecCccc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-LKECTIIEGDAEDLPFPT-DYADRYVSAGSIE 189 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~-~~~i~~~~~d~~~~~~~~-~~fD~v~~~~~l~ 189 (340)
.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++.. ..+++++++|+.+++++. ++| .|+++-..+
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~~--~~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~f-~vv~n~Py~ 104 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAKI--SKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRY-KIVGNIPYH 104 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHHH--SSEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSSEE-EEEEECCSS
T ss_pred CCCCEEEEEeCCCCHHHHHHHHh--CCeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccCCCc-EEEEeCCcc
Confidence 36789999999999999999998 5899999999999999987653 357999999999887663 578 666653222
Q ss_pred -----------ccCCHHHHH----HHHHHhcccCcEEEEEc
Q 019479 190 -----------YWPDPQRGI----KEAYRVLKIGGKACVIG 215 (340)
Q Consensus 190 -----------~~~d~~~~l----~~~~~~LkpgG~l~i~~ 215 (340)
|..+....+ +.+.++|+|||.+.+..
T Consensus 105 ~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 105 LSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp SCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred ccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 222333344 66788888888775543
No 252
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.08 E-value=3e-10 Score=101.46 Aligned_cols=88 Identities=23% Similarity=0.296 Sum_probs=73.4
Q ss_pred HHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC-CCCCcEEEEcCCCCCCCCCC
Q 019479 99 DMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE-PLKECTIIEGDAEDLPFPTD 177 (340)
Q Consensus 99 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~-~~~~i~~~~~d~~~~~~~~~ 177 (340)
.+...++..+.. .++.+|||||||+|.++..+++. +.+|+++|+++.+++.++++. ..++++++++|+.++++++.
T Consensus 37 ~i~~~Iv~~l~~-~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~ 113 (295)
T 3gru_A 37 NFVNKAVESANL-TKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKL 113 (295)
T ss_dssp HHHHHHHHHTTC-CTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGS
T ss_pred HHHHHHHHhcCC-CCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcccC
Confidence 455556665554 46889999999999999999998 689999999999999999874 34689999999998887777
Q ss_pred CccEEEecCccc
Q 019479 178 YADRYVSAGSIE 189 (340)
Q Consensus 178 ~fD~v~~~~~l~ 189 (340)
+||.|+++..++
T Consensus 114 ~fD~Iv~NlPy~ 125 (295)
T 3gru_A 114 DFNKVVANLPYQ 125 (295)
T ss_dssp CCSEEEEECCGG
T ss_pred CccEEEEeCccc
Confidence 899999875554
No 253
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.08 E-value=2e-09 Score=101.28 Aligned_cols=96 Identities=15% Similarity=0.099 Sum_probs=75.2
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC---CCCcEEEEcCCCCCCCCCCCccEEEecCcc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---LKECTIIEGDAEDLPFPTDYADRYVSAGSI 188 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~---~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l 188 (340)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++.. .. ++|+++|+.++.. . +||+|++.-..
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~-~-~fD~Vv~dPPr 363 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSV-K-GFDTVIVDPPR 363 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCC-T-TCSEEEECCCT
T ss_pred CCCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCc-c-CCCEEEEcCCc
Confidence 46789999999999999999987 6799999999999999997742 23 8999999987642 2 79999985442
Q ss_pred cccCCHHHHHHHHHHhcccCcEEEEEc
Q 019479 189 EYWPDPQRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 189 ~~~~d~~~~l~~~~~~LkpgG~l~i~~ 215 (340)
... ...+++.+. .|+|||.+++..
T Consensus 364 ~g~--~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 364 AGL--HPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp TCS--CHHHHHHHH-HHCCSEEEEEES
T ss_pred cch--HHHHHHHHH-hcCCCcEEEEEC
Confidence 211 124555554 589999998874
No 254
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.07 E-value=3.9e-10 Score=101.40 Aligned_cols=85 Identities=22% Similarity=0.307 Sum_probs=64.2
Q ss_pred HHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCCCCCCC
Q 019479 100 MRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAEDLPFPT 176 (340)
Q Consensus 100 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~~~~~~ 176 (340)
+...++..+.. .++.+|||||||+|.++..+++. +.+|+|+|+++.+++.++++. ..++++++++|+.++++
T Consensus 30 i~~~i~~~~~~-~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~-- 104 (299)
T 2h1r_A 30 ILDKIIYAAKI-KSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVF-- 104 (299)
T ss_dssp HHHHHHHHHCC-CTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCC--
T ss_pred HHHHHHHhcCC-CCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCc--
Confidence 34444444443 46789999999999999999987 679999999999999999763 34689999999987764
Q ss_pred CCccEEEecCccc
Q 019479 177 DYADRYVSAGSIE 189 (340)
Q Consensus 177 ~~fD~v~~~~~l~ 189 (340)
++||+|+++...+
T Consensus 105 ~~~D~Vv~n~py~ 117 (299)
T 2h1r_A 105 PKFDVCTANIPYK 117 (299)
T ss_dssp CCCSEEEEECCGG
T ss_pred ccCCEEEEcCCcc
Confidence 4799999976554
No 255
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.06 E-value=5.2e-10 Score=101.76 Aligned_cols=105 Identities=20% Similarity=0.143 Sum_probs=80.4
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC-----------CCcEEEEcCCCCCCC----CC
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-----------KECTIIEGDAEDLPF----PT 176 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~-----------~~i~~~~~d~~~~~~----~~ 176 (340)
+.+++||+||||+|..+..+++.. ..+|+++|+++.+++.|++++.. ++++++.+|..+.-- ..
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~-~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLK-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTC-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCCEEEEEECChhHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 467899999999999999998874 48999999999999999988531 268999999966321 35
Q ss_pred CCccEEEecCcc-ccc--C---CHHHHHHHH----HHhcccCcEEEEEccC
Q 019479 177 DYADRYVSAGSI-EYW--P---DPQRGIKEA----YRVLKIGGKACVIGPV 217 (340)
Q Consensus 177 ~~fD~v~~~~~l-~~~--~---d~~~~l~~~----~~~LkpgG~l~i~~~~ 217 (340)
++||+|++...- ..- + -...+++.+ .++|+|||.+++....
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 789999986432 111 1 124566666 8999999999887543
No 256
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.04 E-value=1.1e-09 Score=101.86 Aligned_cols=123 Identities=15% Similarity=0.017 Sum_probs=90.9
Q ss_pred CCCchHHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCC-----------------------------------
Q 019479 93 PGHWTEDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDA----------------------------------- 137 (340)
Q Consensus 93 ~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~----------------------------------- 137 (340)
..+..+.+...++..... .++..|||++||+|.+++.++....+
T Consensus 182 ~Apl~e~lAa~ll~l~~~-~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~ 260 (393)
T 3k0b_A 182 SAPIKETMAAALVLLTSW-HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANY 260 (393)
T ss_dssp SCSCCHHHHHHHHHHSCC-CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCT
T ss_pred CCCCcHHHHHHHHHHhCC-CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcc
Confidence 345566677777766665 46789999999999999888775322
Q ss_pred ---ceEEEEeCCHHHHHHHHHhC---CC-CCcEEEEcCCCCCCCCCCCccEEEecCcccc-c---CCHHHHHHHHHHhcc
Q 019479 138 ---KNVTILDQSPHQLAKAKQKE---PL-KECTIIEGDAEDLPFPTDYADRYVSAGSIEY-W---PDPQRGIKEAYRVLK 206 (340)
Q Consensus 138 ---~~v~g~D~s~~~~~~a~~~~---~~-~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~---~d~~~~l~~~~~~Lk 206 (340)
.+|+|+|+++.+++.|+++. .. .+++++++|+.+++.+ .+||+|+++--+.. + .+...+++++.+.||
T Consensus 261 ~~~~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk 339 (393)
T 3k0b_A 261 DQPLNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYK 339 (393)
T ss_dssp TCCCCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHh
Confidence 46999999999999999873 22 3599999999887754 47999999855432 2 223456677777777
Q ss_pred c--CcEEEEEccC
Q 019479 207 I--GGKACVIGPV 217 (340)
Q Consensus 207 p--gG~l~i~~~~ 217 (340)
+ ||.+++....
T Consensus 340 ~~~g~~~~iit~~ 352 (393)
T 3k0b_A 340 RMPTWSVYVLTSY 352 (393)
T ss_dssp TCTTCEEEEEECC
T ss_pred cCCCCEEEEEECC
Confidence 6 8998887653
No 257
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.01 E-value=2.1e-09 Score=99.60 Aligned_cols=122 Identities=10% Similarity=-0.003 Sum_probs=91.5
Q ss_pred CCchHHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCC------------------------------------
Q 019479 94 GHWTEDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDA------------------------------------ 137 (340)
Q Consensus 94 ~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~------------------------------------ 137 (340)
.+..+.+...++..... .++..|||.+||+|.+++.++....+
T Consensus 176 Apl~e~LAaall~l~~~-~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~ 254 (384)
T 3ldg_A 176 APIKENMAAAIILLSNW-FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYD 254 (384)
T ss_dssp CCCCHHHHHHHHHHTTC-CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTT
T ss_pred CCCcHHHHHHHHHHhCC-CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhcc
Confidence 34556677777766665 46789999999999999988765322
Q ss_pred --ceEEEEeCCHHHHHHHHHhC---CC-CCcEEEEcCCCCCCCCCCCccEEEecCcccc-cC---CHHHHHHHHHHhccc
Q 019479 138 --KNVTILDQSPHQLAKAKQKE---PL-KECTIIEGDAEDLPFPTDYADRYVSAGSIEY-WP---DPQRGIKEAYRVLKI 207 (340)
Q Consensus 138 --~~v~g~D~s~~~~~~a~~~~---~~-~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~~---d~~~~l~~~~~~Lkp 207 (340)
.+++|+|+++.+++.|+++. .. .+++++++|+.+++.+ .+||+|+++--+.. +. +...+++++.+.||+
T Consensus 255 ~~~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~ 333 (384)
T 3ldg_A 255 IQLDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAP 333 (384)
T ss_dssp CCCCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTT
T ss_pred CCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhh
Confidence 46999999999999999873 22 3589999999887754 47999999855432 22 234677777778776
Q ss_pred --CcEEEEEccC
Q 019479 208 --GGKACVIGPV 217 (340)
Q Consensus 208 --gG~l~i~~~~ 217 (340)
||.+++....
T Consensus 334 ~~g~~~~iit~~ 345 (384)
T 3ldg_A 334 LKTWSQFILTND 345 (384)
T ss_dssp CTTSEEEEEESC
T ss_pred CCCcEEEEEECC
Confidence 9999888653
No 258
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.00 E-value=1.8e-09 Score=100.41 Aligned_cols=121 Identities=12% Similarity=-0.011 Sum_probs=90.5
Q ss_pred CchHHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCC-------------------------------------
Q 019479 95 HWTEDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDA------------------------------------- 137 (340)
Q Consensus 95 ~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~------------------------------------- 137 (340)
+..+.+...++..... .++.+|||++||+|.+++.++....+
T Consensus 178 pl~e~lAa~ll~~~~~-~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~ 256 (385)
T 3ldu_A 178 PIRETLAAGLIYLTPW-KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNES 256 (385)
T ss_dssp CCCHHHHHHHHHTSCC-CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSC
T ss_pred CCcHHHHHHHHHhhCC-CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccC
Confidence 4455666666666655 46789999999999999998776321
Q ss_pred -ceEEEEeCCHHHHHHHHHhCC----CCCcEEEEcCCCCCCCCCCCccEEEecCcccc-c---CCHHHHHHHHHHhccc-
Q 019479 138 -KNVTILDQSPHQLAKAKQKEP----LKECTIIEGDAEDLPFPTDYADRYVSAGSIEY-W---PDPQRGIKEAYRVLKI- 207 (340)
Q Consensus 138 -~~v~g~D~s~~~~~~a~~~~~----~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~---~d~~~~l~~~~~~Lkp- 207 (340)
.+|+|+|+++.+++.|+++.. ..++++.++|+.+++.+ .+||+|+++--+.. + .+...+++++.+.||+
T Consensus 257 ~~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~ 335 (385)
T 3ldu_A 257 KFKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKL 335 (385)
T ss_dssp CCCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTS
T ss_pred CceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhC
Confidence 579999999999999998732 23689999999887654 57999999766542 2 2234667777777876
Q ss_pred -CcEEEEEccC
Q 019479 208 -GGKACVIGPV 217 (340)
Q Consensus 208 -gG~l~i~~~~ 217 (340)
|+.+++....
T Consensus 336 ~g~~~~iit~~ 346 (385)
T 3ldu_A 336 KNWSYYLITSY 346 (385)
T ss_dssp BSCEEEEEESC
T ss_pred CCCEEEEEECC
Confidence 8888887653
No 259
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.00 E-value=8.3e-10 Score=97.45 Aligned_cols=88 Identities=17% Similarity=0.127 Sum_probs=71.6
Q ss_pred HHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCC
Q 019479 98 EDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTD 177 (340)
Q Consensus 98 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~ 177 (340)
..+...+++.+.. .++ +|||||||+|.++..+++. +.+|+++|+++.+++.++++....+++++++|+.++++++.
T Consensus 33 ~~i~~~Iv~~~~~-~~~-~VLEIG~G~G~lt~~L~~~--~~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~ 108 (271)
T 3fut_A 33 EAHLRRIVEAARP-FTG-PVFEVGPGLGALTRALLEA--GAEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEV 108 (271)
T ss_dssp HHHHHHHHHHHCC-CCS-CEEEECCTTSHHHHHHHHT--TCCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGS
T ss_pred HHHHHHHHHhcCC-CCC-eEEEEeCchHHHHHHHHHc--CCEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhhc
Confidence 3455666666655 356 9999999999999999998 58999999999999999998776789999999988776542
Q ss_pred -CccEEEecCccc
Q 019479 178 -YADRYVSAGSIE 189 (340)
Q Consensus 178 -~fD~v~~~~~l~ 189 (340)
.+|.|+++.-.+
T Consensus 109 ~~~~~iv~NlPy~ 121 (271)
T 3fut_A 109 PQGSLLVANLPYH 121 (271)
T ss_dssp CTTEEEEEEECSS
T ss_pred cCccEEEecCccc
Confidence 588888775543
No 260
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.98 E-value=1.2e-09 Score=103.74 Aligned_cols=104 Identities=20% Similarity=0.210 Sum_probs=81.6
Q ss_pred CCCCEEEEEcCccchHHHHHHHhC-------------CCceEEEEeCCHHHHHHHHHhC---CCC--CcEEEEcCCCCCC
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHV-------------DAKNVTILDQSPHQLAKAKQKE---PLK--ECTIIEGDAEDLP 173 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~-------------~~~~v~g~D~s~~~~~~a~~~~---~~~--~i~~~~~d~~~~~ 173 (340)
.++.+|||+|||+|.++..+++.. +..+++|+|+++.+++.|+.+. ... ++.+.++|....+
T Consensus 170 ~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~ 249 (445)
T 2okc_A 170 QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKE 249 (445)
T ss_dssp CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSC
T ss_pred CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCc
Confidence 367899999999999999888753 3468999999999999998762 222 6788999987655
Q ss_pred CCCCCccEEEecCcccccCC-----------------HHHHHHHHHHhcccCcEEEEEcc
Q 019479 174 FPTDYADRYVSAGSIEYWPD-----------------PQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 174 ~~~~~fD~v~~~~~l~~~~d-----------------~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
.. ++||+|+++-.+..... ...+++++.+.|||||++.++.+
T Consensus 250 ~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 250 PS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp CS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 33 47999999866654321 13789999999999999988864
No 261
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.95 E-value=3.6e-09 Score=97.94 Aligned_cols=134 Identities=13% Similarity=0.059 Sum_probs=91.3
Q ss_pred HHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCCCC-
Q 019479 98 EDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAEDLP- 173 (340)
Q Consensus 98 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~~~- 173 (340)
+.+...+++.... .+.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|+++. ...|++|+++|+++..
T Consensus 200 ~~l~~~~~~~~~~--~~~~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~ 275 (369)
T 3bt7_A 200 IQMLEWALDVTKG--SKGDLLELYCGNGNFSLALARN--FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQ 275 (369)
T ss_dssp HHHHHHHHHHTTT--CCSEEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHH
T ss_pred HHHHHHHHHHhhc--CCCEEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHH
Confidence 3444455554443 3578999999999999998885 579999999999999999763 3358999999996531
Q ss_pred -CCC--------------CCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHH
Q 019479 174 -FPT--------------DYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEE 238 (340)
Q Consensus 174 -~~~--------------~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (340)
+.. .+||+|++.---. .+..++.+.|+++|+++.+...... -..
T Consensus 276 ~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~------g~~~~~~~~l~~~g~ivyvsc~p~t---------------~ar 334 (369)
T 3bt7_A 276 AMNGVREFNRLQGIDLKSYQCETIFVDPPRS------GLDSETEKMVQAYPRILYISCNPET---------------LCK 334 (369)
T ss_dssp HHSSCCCCTTGGGSCGGGCCEEEEEECCCTT------CCCHHHHHHHTTSSEEEEEESCHHH---------------HHH
T ss_pred HHhhccccccccccccccCCCCEEEECcCcc------ccHHHHHHHHhCCCEEEEEECCHHH---------------HHH
Confidence 111 3799999743221 2345677778899998877643211 012
Q ss_pred HHHHHHHHCCCcEEEEEEeC
Q 019479 239 EYIEWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 239 ~~~~~l~~aGF~~v~~~~~~ 258 (340)
++..+. + ||+..++..+.
T Consensus 335 d~~~l~-~-~y~~~~~~~~D 352 (369)
T 3bt7_A 335 NLETLS-Q-THKVERLALFD 352 (369)
T ss_dssp HHHHHH-H-HEEEEEEEEEC
T ss_pred HHHHHh-h-CcEEEEEEeec
Confidence 333333 2 68887777664
No 262
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.94 E-value=8.3e-09 Score=92.92 Aligned_cols=105 Identities=13% Similarity=0.075 Sum_probs=77.3
Q ss_pred CCCCEEEEEcCccchHHHHHHHhC-CCceEEEEeCCHHHHHHHHHh---CCCCCcEEEEcCCCCCCCCC---CCccEEEe
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQK---EPLKECTIIEGDAEDLPFPT---DYADRYVS 184 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~---~~~~~i~~~~~d~~~~~~~~---~~fD~v~~ 184 (340)
.++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.++++ ....+++++++|+.+++... .+||.|++
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl~ 180 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILL 180 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEEE
Confidence 478899999999999999999875 358999999999999999876 34468999999997765322 47999997
Q ss_pred c------CcccccC-----------CH-------HHHHHHHHHhcccCcEEEEEccC
Q 019479 185 A------GSIEYWP-----------DP-------QRGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 185 ~------~~l~~~~-----------d~-------~~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
. .++..-+ +. .++|+.+.+.++ ||+|+..+..
T Consensus 181 D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs 236 (309)
T 2b9e_A 181 DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCS 236 (309)
T ss_dssp CCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESC
T ss_pred cCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCC
Confidence 3 1221111 11 146777878787 8988776543
No 263
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.94 E-value=2.4e-09 Score=93.72 Aligned_cols=84 Identities=18% Similarity=0.215 Sum_probs=66.7
Q ss_pred HHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC-CCCcEEEEcCCCCCCCCC-
Q 019479 99 DMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-LKECTIIEGDAEDLPFPT- 176 (340)
Q Consensus 99 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~-~~~i~~~~~d~~~~~~~~- 176 (340)
.+...++..+.. .++.+|||||||+|.++..+++. +.+|+++|+++.+++.++++.. .++++++++|+.++++++
T Consensus 16 ~i~~~iv~~~~~-~~~~~VLEIG~G~G~lt~~La~~--~~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~ 92 (255)
T 3tqs_A 16 FVLQKIVSAIHP-QKTDTLVEIGPGRGALTDYLLTE--CDNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFSSV 92 (255)
T ss_dssp HHHHHHHHHHCC-CTTCEEEEECCTTTTTHHHHTTT--SSEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGGGS
T ss_pred HHHHHHHHhcCC-CCcCEEEEEcccccHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHHHh
Confidence 344555555554 36889999999999999999987 5899999999999999998854 468999999998877543
Q ss_pred ---CCccEEEecC
Q 019479 177 ---DYADRYVSAG 186 (340)
Q Consensus 177 ---~~fD~v~~~~ 186 (340)
++|| |+++-
T Consensus 93 ~~~~~~~-vv~Nl 104 (255)
T 3tqs_A 93 KTDKPLR-VVGNL 104 (255)
T ss_dssp CCSSCEE-EEEEC
T ss_pred ccCCCeE-EEecC
Confidence 4688 66543
No 264
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.92 E-value=9.2e-09 Score=91.13 Aligned_cols=104 Identities=15% Similarity=0.177 Sum_probs=83.2
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC--------CCCCcEEEEcCCCCC-CCCCCCccEE
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE--------PLKECTIIEGDAEDL-PFPTDYADRY 182 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~--------~~~~i~~~~~d~~~~-~~~~~~fD~v 182 (340)
+.+++||-||.|.|..+..+++..+..+|+.+|+++.+++.+++.+ ..++++++.+|.... ....++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 3678999999999999999999866689999999999999999764 357899999999663 3456789999
Q ss_pred EecCcccccC----CHHHHHHHHHHhcccCcEEEEEc
Q 019479 183 VSAGSIEYWP----DPQRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 183 ~~~~~l~~~~----d~~~~l~~~~~~LkpgG~l~i~~ 215 (340)
++...=..-+ -...+++.+++.|+|||.++...
T Consensus 162 i~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred EEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 9743211111 11378999999999999998874
No 265
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.89 E-value=1.6e-09 Score=100.33 Aligned_cols=99 Identities=21% Similarity=0.115 Sum_probs=79.4
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC------------------CCCCcEEEEcCCCCCC-
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE------------------PLKECTIIEGDAEDLP- 173 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~------------------~~~~i~~~~~d~~~~~- 173 (340)
++.+|||+|||+|..+..++.+.++.+|+++|+++.+++.++++. ...+++++++|+.++.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 578999999999999999999877788999999999999999763 3234889999986532
Q ss_pred CCCCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEc
Q 019479 174 FPTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 174 ~~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~ 215 (340)
...++||+|++.- . .....++..+.+.|||||.++++.
T Consensus 127 ~~~~~fD~I~lDP-~---~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDP-F---GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECC-S---SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCC-C---CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 1135799999643 2 134678999999999999888774
No 266
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.89 E-value=2.9e-09 Score=97.22 Aligned_cols=148 Identities=14% Similarity=0.129 Sum_probs=102.5
Q ss_pred CCCCEEEEEcCccchHHHHHHHh----------------CCCceEEEEeCCHHHHHHHHHhCCC----CCcEE---EEcC
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKH----------------VDAKNVTILDQSPHQLAKAKQKEPL----KECTI---IEGD 168 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~----------------~~~~~v~g~D~s~~~~~~a~~~~~~----~~i~~---~~~d 168 (340)
+...+|+|+||++|..+..+... .|..+|+..|+.......+-+.+.. .+..| +.+.
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGS 129 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESC
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchh
Confidence 35678999999999887765443 3568999999988777777665432 12234 4456
Q ss_pred CCCCCCCCCCccEEEecCcccccCCH---------------------------------HHHHHHHHHhcccCcEEEEEc
Q 019479 169 AEDLPFPTDYADRYVSAGSIEYWPDP---------------------------------QRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 169 ~~~~~~~~~~fD~v~~~~~l~~~~d~---------------------------------~~~l~~~~~~LkpgG~l~i~~ 215 (340)
+..-.++++++|+|+++.++||+.+. ..+|+..++.|+|||++++..
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 65567899999999999999998542 245888999999999999875
Q ss_pred cCCCch----------h--HhhHhhhH----------------hhcCCCHHHHHHHHHHCC-CcEEEEEEeCC
Q 019479 216 PVYPTF----------W--LSRFFADV----------------WMLFPKEEEYIEWFQKAG-FKDVKLKRIGP 259 (340)
Q Consensus 216 ~~~~~~----------~--~~~~~~~~----------------~~~~~~~~~~~~~l~~aG-F~~v~~~~~~~ 259 (340)
...... + +...+.++ ...+++.+++++.+++.| |++.+++.+..
T Consensus 210 ~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e~~~~ 282 (359)
T 1m6e_X 210 LGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEI 282 (359)
T ss_dssp EECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEEEE
T ss_pred ecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEEEEee
Confidence 433221 1 11111111 112678999999999995 47777666543
No 267
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.88 E-value=1.3e-09 Score=97.61 Aligned_cols=84 Identities=14% Similarity=0.150 Sum_probs=67.2
Q ss_pred HhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC--CCcEEEEcCCCCCC--CC---
Q 019479 103 EALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL--KECTIIEGDAEDLP--FP--- 175 (340)
Q Consensus 103 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~--~~i~~~~~d~~~~~--~~--- 175 (340)
.+++.+.. .++.+|||+|||+|.++..+++.+|+.+|+|+|.|+.+++.|+++... .+++++++|+.+++ +.
T Consensus 17 e~l~~L~~-~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~~g 95 (301)
T 1m6y_A 17 EVIEFLKP-EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLG 95 (301)
T ss_dssp HHHHHHCC-CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTT
T ss_pred HHHHhcCC-CCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHhcC
Confidence 33333333 467899999999999999999998778999999999999999988543 58999999998764 11
Q ss_pred CCCccEEEecCc
Q 019479 176 TDYADRYVSAGS 187 (340)
Q Consensus 176 ~~~fD~v~~~~~ 187 (340)
..+||.|++...
T Consensus 96 ~~~~D~Vl~D~g 107 (301)
T 1m6y_A 96 IEKVDGILMDLG 107 (301)
T ss_dssp CSCEEEEEEECS
T ss_pred CCCCCEEEEcCc
Confidence 157999998543
No 268
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.86 E-value=1.6e-08 Score=88.23 Aligned_cols=75 Identities=24% Similarity=0.396 Sum_probs=62.5
Q ss_pred HHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCC
Q 019479 99 DMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPT 176 (340)
Q Consensus 99 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~ 176 (340)
.+...+++.+.. .++.+|||||||+|.++..+++. +..+|+|+|+++.+++.++++ ...+++++++|+.++++++
T Consensus 18 ~i~~~iv~~~~~-~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~-~~~~v~~i~~D~~~~~~~~ 92 (249)
T 3ftd_A 18 GVLKKIAEELNI-EEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSI-GDERLEVINEDASKFPFCS 92 (249)
T ss_dssp HHHHHHHHHTTC-CTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTS-CCTTEEEECSCTTTCCGGG
T ss_pred HHHHHHHHhcCC-CCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhc-cCCCeEEEEcchhhCChhH
Confidence 455556665554 36789999999999999999987 458999999999999999988 6678999999999887654
No 269
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.85 E-value=4.7e-09 Score=97.30 Aligned_cols=99 Identities=16% Similarity=0.071 Sum_probs=79.1
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCC-ceEEEEeCCHHHHHHHHHhC---CCCC--cEEEEcCCCCCC--CCCCCccEEEe
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDA-KNVTILDQSPHQLAKAKQKE---PLKE--CTIIEGDAEDLP--FPTDYADRYVS 184 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~g~D~s~~~~~~a~~~~---~~~~--i~~~~~d~~~~~--~~~~~fD~v~~ 184 (340)
++.+|||++||+|.+++.++.+.++ .+|+++|+++.+++.+++++ ...+ ++++++|+.++- ...++||+|++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 5789999999999999999997545 68999999999999999873 3333 899999985531 12457999998
Q ss_pred cCcccccCCHHHHHHHHHHhcccCcEEEEEc
Q 019479 185 AGSIEYWPDPQRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 185 ~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~ 215 (340)
.- . .....++..+.+.|+|||.|+++.
T Consensus 132 DP-~---g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 132 DP-F---GTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp CC-S---SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC-C---cCHHHHHHHHHHHhCCCCEEEEEe
Confidence 65 1 233568999999999999888875
No 270
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.80 E-value=1.1e-08 Score=88.93 Aligned_cols=107 Identities=13% Similarity=0.066 Sum_probs=73.6
Q ss_pred CCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC-CCCCcEEEEcCCCCCCCCCCCccEEEecCcc
Q 019479 110 LFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE-PLKECTIIEGDAEDLPFPTDYADRYVSAGSI 188 (340)
Q Consensus 110 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~-~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l 188 (340)
..+++.+|||+|||+|.|+..+++..+...++|+|++..+........ ...++.....+++...+..++||+|++..+.
T Consensus 71 ~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~ap 150 (277)
T 3evf_A 71 YVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLCDIGE 150 (277)
T ss_dssp SSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCC
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCccEEEecCcc
Confidence 445788999999999999999888755567889998744311110000 0125666777765566777889999997655
Q ss_pred cccC----CHH---HHHHHHHHhcccC-cEEEEEccC
Q 019479 189 EYWP----DPQ---RGIKEAYRVLKIG-GKACVIGPV 217 (340)
Q Consensus 189 ~~~~----d~~---~~l~~~~~~Lkpg-G~l~i~~~~ 217 (340)
+ .. |.. .+|+.+.++|||| |.+++-.+.
T Consensus 151 n-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 151 S-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp C-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred C-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 5 22 221 3468889999999 999886443
No 271
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.75 E-value=1.1e-08 Score=90.78 Aligned_cols=74 Identities=18% Similarity=0.275 Sum_probs=59.2
Q ss_pred HHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCC--ceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCC
Q 019479 100 MRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDA--KNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFP 175 (340)
Q Consensus 100 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~--~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~ 175 (340)
+...++..+.. .++.+|||||||+|.++..+++..+. .+|+|+|+++.+++.++++. ..+++++++|+.+++++
T Consensus 30 i~~~iv~~~~~-~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-~~~v~~i~~D~~~~~~~ 105 (279)
T 3uzu_A 30 VIDAIVAAIRP-ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-GELLELHAGDALTFDFG 105 (279)
T ss_dssp HHHHHHHHHCC-CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-GGGEEEEESCGGGCCGG
T ss_pred HHHHHHHhcCC-CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-CCCcEEEECChhcCChh
Confidence 44455555544 46889999999999999999998422 34999999999999999874 56899999999887754
No 272
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.73 E-value=6.8e-09 Score=90.92 Aligned_cols=126 Identities=22% Similarity=0.233 Sum_probs=84.6
Q ss_pred CCCEEEEEcCccchHHHHHHHh-------CCC-----ceEEEEeCCH---HHHH-----------HHHHhC---------
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKH-------VDA-----KNVTILDQSP---HQLA-----------KAKQKE--------- 157 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~-------~~~-----~~v~g~D~s~---~~~~-----------~a~~~~--------- 157 (340)
++.+|||||+|+|..+..+++. .|. .+++++|..| +.+. .+++..
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 5679999999999998887664 453 5899999876 4433 344321
Q ss_pred ------CC--CCcEEEEcCCCC-CCCCC----CCccEEEecC-cccccCC--HHHHHHHHHHhcccCcEEEEEccCCCch
Q 019479 158 ------PL--KECTIIEGDAED-LPFPT----DYADRYVSAG-SIEYWPD--PQRGIKEAYRVLKIGGKACVIGPVYPTF 221 (340)
Q Consensus 158 ------~~--~~i~~~~~d~~~-~~~~~----~~fD~v~~~~-~l~~~~d--~~~~l~~~~~~LkpgG~l~i~~~~~~~~ 221 (340)
.. .+++++.+|+.+ ++..+ ..||+|+... .-...++ ...+++.++++|+|||+|+....
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tysa----- 214 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTS----- 214 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESCC-----
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEeC-----
Confidence 11 346789999865 44222 2799999843 1111122 24799999999999999874221
Q ss_pred hHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEeC
Q 019479 222 WLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~ 258 (340)
...++..|.++||++.+....+
T Consensus 215 ---------------a~~vrr~L~~aGF~v~~~~g~~ 236 (257)
T 2qy6_A 215 ---------------AGFVRRGLQEAGFTMQKRKGFG 236 (257)
T ss_dssp ---------------BHHHHHHHHHHTEEEEEECCST
T ss_pred ---------------CHHHHHHHHHCCCEEEeCCCCC
Confidence 1346678899999977665443
No 273
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.71 E-value=6.8e-08 Score=96.42 Aligned_cols=125 Identities=10% Similarity=0.006 Sum_probs=87.5
Q ss_pred cCCCCchHHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhC-----------------------------------
Q 019479 91 INPGHWTEDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHV----------------------------------- 135 (340)
Q Consensus 91 ~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~----------------------------------- 135 (340)
....+..+.+...++..... .++..|||.+||+|.+++.++...
T Consensus 169 ~~~apl~e~LAa~ll~~~~~-~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~ 247 (703)
T 3v97_A 169 AGIAPIKETLAAAIVMRSGW-QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTR 247 (703)
T ss_dssp SCCCSSCHHHHHHHHHHTTC-CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHHHHhhCC-CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHH
Confidence 33445566777777776665 467899999999999998877642
Q ss_pred -------CCceEEEEeCCHHHHHHHHHhC---CC-CCcEEEEcCCCCCC--CCCCCccEEEecCcccc-cC---CHHHHH
Q 019479 136 -------DAKNVTILDQSPHQLAKAKQKE---PL-KECTIIEGDAEDLP--FPTDYADRYVSAGSIEY-WP---DPQRGI 198 (340)
Q Consensus 136 -------~~~~v~g~D~s~~~~~~a~~~~---~~-~~i~~~~~d~~~~~--~~~~~fD~v~~~~~l~~-~~---d~~~~l 198 (340)
+..+++|+|+++.+++.|++++ .. ..+++.++|+.++. ...++||+|+++--+.. +. +...++
T Consensus 248 ~~~~~~~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly 327 (703)
T 3v97_A 248 ARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALH 327 (703)
T ss_dssp HHHHHHHCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHH
T ss_pred hhhccccCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHH
Confidence 1257999999999999999873 22 34899999998763 33347999999854432 21 223444
Q ss_pred HHH---HHhcccCcEEEEEcc
Q 019479 199 KEA---YRVLKIGGKACVIGP 216 (340)
Q Consensus 199 ~~~---~~~LkpgG~l~i~~~ 216 (340)
+.+ .+.+.|||.+++...
T Consensus 328 ~~l~~~lk~~~~g~~~~ilt~ 348 (703)
T 3v97_A 328 SLLGRIMKNQFGGWNLSLFSA 348 (703)
T ss_dssp HHHHHHHHHHCTTCEEEEEES
T ss_pred HHHHHHHHhhCCCCeEEEEeC
Confidence 444 444558999988754
No 274
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.68 E-value=4e-09 Score=92.60 Aligned_cols=77 Identities=17% Similarity=0.163 Sum_probs=61.1
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCH-------HHHHHHHHhCC----CCCcEEEEcCCCCC-C-CCC--C
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSP-------HQLAKAKQKEP----LKECTIIEGDAEDL-P-FPT--D 177 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~-------~~~~~a~~~~~----~~~i~~~~~d~~~~-~-~~~--~ 177 (340)
++.+|||+|||+|..+..+++. +.+|+++|+++ .+++.|+++.. ..+++++++|+.++ + +++ +
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~ 160 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQG 160 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHC
T ss_pred CcCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCC
Confidence 5689999999999999999997 67999999999 99999986532 13599999999763 2 333 6
Q ss_pred CccEEEecCccccc
Q 019479 178 YADRYVSAGSIEYW 191 (340)
Q Consensus 178 ~fD~v~~~~~l~~~ 191 (340)
+||+|++.-.+.+.
T Consensus 161 ~fD~V~~dP~~~~~ 174 (258)
T 2r6z_A 161 KPDIVYLDPMYPER 174 (258)
T ss_dssp CCSEEEECCCC---
T ss_pred CccEEEECCCCCCc
Confidence 89999998777653
No 275
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.66 E-value=2.4e-08 Score=96.77 Aligned_cols=105 Identities=16% Similarity=0.066 Sum_probs=79.8
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCC------------------CceEEEEeCCHHHHHHHHHhC---CCCC-----cEEE
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVD------------------AKNVTILDQSPHQLAKAKQKE---PLKE-----CTII 165 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~------------------~~~v~g~D~s~~~~~~a~~~~---~~~~-----i~~~ 165 (340)
.++.+|+|.+||+|.++..+++... ...++|+|+++.+++.|+.+. ...+ +.+.
T Consensus 168 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~ 247 (541)
T 2ar0_A 168 QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIR 247 (541)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEE
T ss_pred CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeE
Confidence 3678999999999999988876531 247999999999999998762 2233 6789
Q ss_pred EcCCCCCC-CCCCCccEEEecCcccccCC--------------HHHHHHHHHHhcccCcEEEEEcc
Q 019479 166 EGDAEDLP-FPTDYADRYVSAGSIEYWPD--------------PQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 166 ~~d~~~~~-~~~~~fD~v~~~~~l~~~~d--------------~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
++|....+ ...++||+|+++-.+..... ...++.++.+.|||||++.++.+
T Consensus 248 ~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 248 LGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp ESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 99986532 34567999999765543321 13789999999999999988854
No 276
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.60 E-value=3.9e-08 Score=85.94 Aligned_cols=84 Identities=18% Similarity=0.196 Sum_probs=61.7
Q ss_pred HHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCce--EEEEeCCHHHHHHHHHhCCC-CCcEEEEcCCCCCCCCC
Q 019479 100 MRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKN--VTILDQSPHQLAKAKQKEPL-KECTIIEGDAEDLPFPT 176 (340)
Q Consensus 100 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~--v~g~D~s~~~~~~a~~~~~~-~~i~~~~~d~~~~~~~~ 176 (340)
+...+++.+.. .++.+|||||||+|.++. +. . +.+ |+++|+++.+++.++++... ++++++++|+.++++++
T Consensus 9 i~~~iv~~~~~-~~~~~VLEIG~G~G~lt~-l~-~--~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~ 83 (252)
T 1qyr_A 9 VIDSIVSAINP-QKGQAMVEIGPGLAALTE-PV-G--ERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGE 83 (252)
T ss_dssp HHHHHHHHHCC-CTTCCEEEECCTTTTTHH-HH-H--TTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHH
T ss_pred HHHHHHHhcCC-CCcCEEEEECCCCcHHHH-hh-h--CCCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHH
Confidence 34444444443 467899999999999999 64 4 345 99999999999999987542 58999999998876532
Q ss_pred -----CCccEEEecCcc
Q 019479 177 -----DYADRYVSAGSI 188 (340)
Q Consensus 177 -----~~fD~v~~~~~l 188 (340)
+..|.|+++-..
T Consensus 84 ~~~~~~~~~~vvsNlPY 100 (252)
T 1qyr_A 84 LAEKMGQPLRVFGNLPY 100 (252)
T ss_dssp HHHHHTSCEEEEEECCT
T ss_pred hhcccCCceEEEECCCC
Confidence 124567765444
No 277
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.60 E-value=1.8e-08 Score=93.59 Aligned_cols=71 Identities=21% Similarity=0.358 Sum_probs=59.8
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC-----CCCCcEEEEcCCCCC-CC-CCCCccEEEec
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE-----PLKECTIIEGDAEDL-PF-PTDYADRYVSA 185 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~-----~~~~i~~~~~d~~~~-~~-~~~~fD~v~~~ 185 (340)
++.+|||+|||+|..+..+++. +.+|+++|+|+.+++.|+++. ...+++++++|+.+. +. .+++||+|++.
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 4799999999999999999887 689999999999999999873 335799999999763 21 23579999985
No 278
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.59 E-value=7.5e-07 Score=74.65 Aligned_cols=95 Identities=15% Similarity=0.013 Sum_probs=71.8
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---C---CCCcEEEEcCCCCC--------------
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---P---LKECTIIEGDAEDL-------------- 172 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~---~~~i~~~~~d~~~~-------------- 172 (340)
+.++|||+||| ..+..+++. ++.+|+.+|.+++..+.|++++ . ..+++++.+|+.+.
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~-~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~ 106 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAEL-PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRS 106 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTS-TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGG
T ss_pred CCCEEEEECch--HHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhh
Confidence 56899999984 677777774 4789999999999999998762 2 45799999997432
Q ss_pred -C--------C-CCCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEc
Q 019479 173 -P--------F-PTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 173 -~--------~-~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~ 215 (340)
+ . ..++||+|+...- .....+..+.+.|+|||+|++-+
T Consensus 107 l~~~~~~i~~~~~~~~fDlIfIDg~-----k~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 107 YPDYPLAVWRTEGFRHPDVVLVDGR-----FRVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp TTHHHHGGGGCTTCCCCSEEEECSS-----SHHHHHHHHHHHCSSCEEEEETT
T ss_pred HHHHhhhhhccccCCCCCEEEEeCC-----CchhHHHHHHHhcCCCeEEEEeC
Confidence 1 1 2367999998652 22366777889999999995544
No 279
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.57 E-value=5.2e-08 Score=84.82 Aligned_cols=107 Identities=15% Similarity=0.071 Sum_probs=71.4
Q ss_pred CCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHh-CCCCCcEEEEcCCCCCCCCCCCccEEEecCcc
Q 019479 110 LFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECTIIEGDAEDLPFPTDYADRYVSAGSI 188 (340)
Q Consensus 110 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~-~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l 188 (340)
.+.++.+|||+|||+|.|+..+++..+...|+|+|++..+...+... ....++.....+.+...++..++|+|+|..+.
T Consensus 87 ~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DvVLSDmAp 166 (282)
T 3gcz_A 87 YVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFNMEVIPGDTLLCDIGE 166 (282)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGGSCCCCCSEEEECCCC
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCcchhhcCCCCcCEEEecCcc
Confidence 44578899999999999999988776667899999976532222110 00123444444433334466789999997666
Q ss_pred cccCCH-----H--HHHHHHHHhcccC--cEEEEEccC
Q 019479 189 EYWPDP-----Q--RGIKEAYRVLKIG--GKACVIGPV 217 (340)
Q Consensus 189 ~~~~d~-----~--~~l~~~~~~Lkpg--G~l~i~~~~ 217 (340)
. .... . .+|+-+.++|+|| |.+++-.+.
T Consensus 167 n-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 167 S-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp C-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred C-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 5 3222 1 3577778999999 999887544
No 280
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.55 E-value=3.4e-08 Score=86.40 Aligned_cols=92 Identities=16% Similarity=0.109 Sum_probs=65.0
Q ss_pred CEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHh-------CCC-----CCcEEEEcCCCC-CCCCCCCccE
Q 019479 115 MRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK-------EPL-----KECTIIEGDAED-LPFPTDYADR 181 (340)
Q Consensus 115 ~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~-------~~~-----~~i~~~~~d~~~-~~~~~~~fD~ 181 (340)
.+|||+|||+|..+..++.. +.+|+++|.++.+.+.+++. ... .+++++++|..+ ++...++||+
T Consensus 90 ~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDv 167 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV--GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQV 167 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH--TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSE
T ss_pred CEEEEcCCcCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCE
Confidence 89999999999999999998 67899999999765444432 211 468999999865 3322236999
Q ss_pred EEecCcccccCCHHHHHHHHHHhcccCc
Q 019479 182 YVSAGSIEYWPDPQRGIKEAYRVLKIGG 209 (340)
Q Consensus 182 v~~~~~l~~~~d~~~~l~~~~~~LkpgG 209 (340)
|++.-.+.+- .....+++..+.|++.+
T Consensus 168 V~lDP~y~~~-~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 168 VYLDPMFPHK-QKSALVKKEMRVFQSLV 194 (258)
T ss_dssp EEECCCCCCC-CC-----HHHHHHHHHS
T ss_pred EEEcCCCCCc-ccchHHHHHHHHHHHhh
Confidence 9998877653 33356667777777654
No 281
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.51 E-value=1.8e-07 Score=91.30 Aligned_cols=100 Identities=21% Similarity=0.201 Sum_probs=71.2
Q ss_pred CCCEEEEEcCccchHHHHHHHh---C----------CCceEEEEeCCHHHHHHHHHh---CCCCCcEEEEcCCCCCCCC-
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKH---V----------DAKNVTILDQSPHQLAKAKQK---EPLKECTIIEGDAEDLPFP- 175 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~---~----------~~~~v~g~D~s~~~~~~a~~~---~~~~~i~~~~~d~~~~~~~- 175 (340)
++..|||||||+|.++...++. . ...+|+++|.++.++...+.+ .-.++|+++.+|++++.++
T Consensus 409 ~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 409 KTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp SEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHH
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhccccc
Confidence 3568999999999996433222 1 124999999999776555433 1225699999999987653
Q ss_pred ----CCCccEEEecCcccccCCH--HHHHHHHHHhcccCcEEE
Q 019479 176 ----TDYADRYVSAGSIEYWPDP--QRGIKEAYRVLKIGGKAC 212 (340)
Q Consensus 176 ----~~~fD~v~~~~~l~~~~d~--~~~l~~~~~~LkpgG~l~ 212 (340)
.+++|+|++-..-....+. .+.|..+.+.|||||.++
T Consensus 489 ~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 5789999986654333222 368888889999999864
No 282
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.47 E-value=7.3e-07 Score=81.45 Aligned_cols=103 Identities=20% Similarity=0.151 Sum_probs=78.0
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC-----------CCCcEEEEcCCCCC----CCCC
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP-----------LKECTIIEGDAEDL----PFPT 176 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~-----------~~~i~~~~~d~~~~----~~~~ 176 (340)
.++++||-||.|.|..+..+++. +..+|+.+|+++.+++.+++.+. .++++++.+|.... .-..
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh-~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~ 282 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKL-KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 282 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT-CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCCeEEEECCCcHHHHHHHHhc-CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhcc
Confidence 45789999999999999999886 56899999999999999998642 13578888988542 1134
Q ss_pred CCccEEEecCcccc-cCCH---------HHHHHHHHHhcccCcEEEEEc
Q 019479 177 DYADRYVSAGSIEY-WPDP---------QRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 177 ~~fD~v~~~~~l~~-~~d~---------~~~l~~~~~~LkpgG~l~i~~ 215 (340)
++||+|+....-.. -.++ ..+++.++++|+|||+++...
T Consensus 283 ~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 283 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 67999997532111 1111 367899999999999998764
No 283
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.44 E-value=1.5e-06 Score=79.12 Aligned_cols=123 Identities=15% Similarity=0.068 Sum_probs=83.3
Q ss_pred CCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCcccc
Q 019479 111 FDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEY 190 (340)
Q Consensus 111 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 190 (340)
+.+|.+|||+||.+|.|+..++++ +.+|++||..+-.. ... ..++++++++|........++||+|+|..+.
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~~l~~-~l~---~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~-- 280 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNGPMAQ-SLM---DTGQVTWLREDGFKFRPTRSNISWMVCDMVE-- 280 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT--TCEEEEECSSCCCH-HHH---TTTCEEEECSCTTTCCCCSSCEEEEEECCSS--
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhhhcCh-hhc---cCCCeEEEeCccccccCCCCCcCEEEEcCCC--
Confidence 358999999999999999999998 78999999865322 222 3478999999998876667789999985433
Q ss_pred cCCHHHHHHHHHHhcccC---cEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcE
Q 019479 191 WPDPQRGIKEAYRVLKIG---GKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKD 251 (340)
Q Consensus 191 ~~d~~~~l~~~~~~Lkpg---G~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~ 251 (340)
++...+..+.+.|..| +.++......... ... .. .....+.+.|+..||..
T Consensus 281 --~p~~~~~l~~~wl~~~~~~~aI~~lKL~mk~~-~~~-l~------~~~~~i~~~l~~~g~~~ 334 (375)
T 4auk_A 281 --KPAKVAALMAQWLVNGWCRETIFNLKLPMKKR-YEE-VS------HNLAYIQAQLDEHGINA 334 (375)
T ss_dssp --CHHHHHHHHHHHHHTTSCSEEEEEEECCSSSH-HHH-HH------HHHHHHHHHHHHTTCCE
T ss_pred --ChHHhHHHHHHHHhccccceEEEEEEecccch-HHH-HH------HHHHHHHHHHHhcCcch
Confidence 5556666666666554 4443332221110 000 00 02456778899999974
No 284
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.42 E-value=1.1e-06 Score=85.02 Aligned_cols=140 Identities=13% Similarity=0.033 Sum_probs=96.0
Q ss_pred CCCCEEEEEcCccchHHHHHHHhC---CCceEEEEeCCHHHHHHHHHhC---CC--CCcEEEEcCCCCC--C-CCCCCcc
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHV---DAKNVTILDQSPHQLAKAKQKE---PL--KECTIIEGDAEDL--P-FPTDYAD 180 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~---~~~~v~g~D~s~~~~~~a~~~~---~~--~~i~~~~~d~~~~--~-~~~~~fD 180 (340)
.++.+|+|.+||+|.++..+++.. +...++|+|+++.+...|+.+. .. .++.+.++|.... | ....+||
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD 299 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFD 299 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBS
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceeccccccccccccc
Confidence 467899999999999999888874 2578999999999999998762 22 3578899998654 3 3467899
Q ss_pred EEEecCcccc-------------------cC---C-HHHHHHHHHHhcc-cCcEEEEEccCCCchhHhhHhhhHhhcCCC
Q 019479 181 RYVSAGSIEY-------------------WP---D-PQRGIKEAYRVLK-IGGKACVIGPVYPTFWLSRFFADVWMLFPK 236 (340)
Q Consensus 181 ~v~~~~~l~~-------------------~~---d-~~~~l~~~~~~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~ 236 (340)
+|+++--+.. ++ + .-.++..+.+.|| |||++.++.+.. ++.. -..
T Consensus 300 ~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g---~Lf~--------~~~ 368 (542)
T 3lkd_A 300 GVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHG---VLFR--------GNA 368 (542)
T ss_dssp EEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETH---HHHC--------CTH
T ss_pred EEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecch---HhhC--------Cch
Confidence 9998733211 00 0 1248999999999 999998886532 1100 001
Q ss_pred HHHHHHHHHHCCCcEEEEEEeCCcccc
Q 019479 237 EEEYIEWFQKAGFKDVKLKRIGPKWYR 263 (340)
Q Consensus 237 ~~~~~~~l~~aGF~~v~~~~~~~~~~~ 263 (340)
...+++.|-+.+. +..+..+....+.
T Consensus 369 ~~~iRk~Lle~~~-l~~II~LP~~lF~ 394 (542)
T 3lkd_A 369 EGTIRKALLEEGA-IDTVIGLPANIFF 394 (542)
T ss_dssp HHHHHHHHHHTTC-EEEEEECCSSCSS
T ss_pred hHHHHHHHHhCCc-eeEEEEccccccC
Confidence 3567777776654 4445555544443
No 285
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.42 E-value=1.7e-06 Score=84.38 Aligned_cols=98 Identities=18% Similarity=0.179 Sum_probs=68.4
Q ss_pred CCCEEEEEcCccchHHHHH---HHhCC-CceEEEEeCCHHHHHHHHHh----CCCCCcEEEEcCCCCCCCCCCCccEEEe
Q 019479 113 RNMRVVDVGGGTGFTTLGI---VKHVD-AKNVTILDQSPHQLAKAKQK----EPLKECTIIEGDAEDLPFPTDYADRYVS 184 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l---~~~~~-~~~v~g~D~s~~~~~~a~~~----~~~~~i~~~~~d~~~~~~~~~~fD~v~~ 184 (340)
....|||||||+|.++... +++.. ..+|+++|-|+.+ ..+++. .-.++|+++++|++++.++ +++|+||+
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A-~~a~~~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIVS 434 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNA-VVTLENWQFEEWGSQVTVVSSDMREWVAP-EKADIIVS 434 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHH-HHHHHHHHHHTTGGGEEEEESCTTTCCCS-SCEEEEEC
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHH-HHHHHHHHhccCCCeEEEEeCcceeccCC-cccCEEEE
Confidence 4568999999999984444 33321 1378999999854 444433 2235699999999998765 57999998
Q ss_pred cCccccc--CCHHHHHHHHHHhcccCcEEE
Q 019479 185 AGSIEYW--PDPQRGIKEAYRVLKIGGKAC 212 (340)
Q Consensus 185 ~~~l~~~--~d~~~~l~~~~~~LkpgG~l~ 212 (340)
-.+-..+ +....++....|.|||||.++
T Consensus 435 EwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 435 ELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 5443322 222367788889999999874
No 286
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.42 E-value=6.3e-07 Score=86.71 Aligned_cols=138 Identities=14% Similarity=0.058 Sum_probs=92.2
Q ss_pred CEEEEEcCccchHHHHHHHhCC---------------CceEEEEeCCHHHHHHHHHhCC----CCCcEEEEcCCCCCC-C
Q 019479 115 MRVVDVGGGTGFTTLGIVKHVD---------------AKNVTILDQSPHQLAKAKQKEP----LKECTIIEGDAEDLP-F 174 (340)
Q Consensus 115 ~~vLDiGcG~G~~~~~l~~~~~---------------~~~v~g~D~s~~~~~~a~~~~~----~~~i~~~~~d~~~~~-~ 174 (340)
.+|||.+||+|.++..+++... ...++|+|+++.++..|+.+.. ..++.+.++|....+ +
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~ 325 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQH 325 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSC
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCccc
Confidence 4999999999999888765431 4689999999999999997621 123444778875433 4
Q ss_pred CCCCccEEEecCcccc--c-----------------------C---CH-HHHHHHHHHhcccCcEEEEEccCCCchhHhh
Q 019479 175 PTDYADRYVSAGSIEY--W-----------------------P---DP-QRGIKEAYRVLKIGGKACVIGPVYPTFWLSR 225 (340)
Q Consensus 175 ~~~~fD~v~~~~~l~~--~-----------------------~---d~-~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~ 225 (340)
...+||+|+++--+.. + + +. -.++..+.+.|||||++.++.+.. .+..
T Consensus 326 ~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g---~L~~ 402 (544)
T 3khk_A 326 PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANG---SMSS 402 (544)
T ss_dssp TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETH---HHHC
T ss_pred ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecch---hhhc
Confidence 5678999999744432 1 1 01 168999999999999998886431 1100
Q ss_pred HhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEeCCcccc
Q 019479 226 FFADVWMLFPKEEEYIEWFQKAGFKDVKLKRIGPKWYR 263 (340)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~~~~~ 263 (340)
. -.....+++.|-+.+. +..+..+....+.
T Consensus 403 ---~----~~~~~~iRk~Lle~~~-l~aII~LP~~lF~ 432 (544)
T 3khk_A 403 ---N----TNNEGEIRKTLVEQDL-VECMVALPGQLFT 432 (544)
T ss_dssp ---C----GGGHHHHHHHHHHTTC-EEEEEECCTTBCC
T ss_pred ---C----cchHHHHHHHHHhCCc-HhEEEECCCCCCC
Confidence 0 0124577777777665 4556666554443
No 287
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.39 E-value=6.2e-07 Score=78.53 Aligned_cols=108 Identities=14% Similarity=0.099 Sum_probs=70.3
Q ss_pred CCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHh-CCCCCcEEEEcCCCCCCCCCCCccEEEecCc
Q 019479 109 DLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECTIIEGDAEDLPFPTDYADRYVSAGS 187 (340)
Q Consensus 109 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~-~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~ 187 (340)
.+..++.+|||+||++|.|+..+++..+...|+|+|+...+....... ....++.....+.....+..+++|+|++..+
T Consensus 77 ~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~DlVlsD~A 156 (300)
T 3eld_A 77 GYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDIG 156 (300)
T ss_dssp TSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCC
T ss_pred CCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEeecCceeeecCCCCcCEEeecCc
Confidence 455689999999999999999999875556899999975421110000 0012333333333323345678999999655
Q ss_pred ccccCCH-------HHHHHHHHHhcccC-cEEEEEccC
Q 019479 188 IEYWPDP-------QRGIKEAYRVLKIG-GKACVIGPV 217 (340)
Q Consensus 188 l~~~~d~-------~~~l~~~~~~Lkpg-G~l~i~~~~ 217 (340)
-. .... ..+|.-+.++|+|| |.+++-.+.
T Consensus 157 Pn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 157 ES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred CC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 54 3222 14577778999999 999887544
No 288
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.38 E-value=1.3e-06 Score=86.57 Aligned_cols=106 Identities=13% Similarity=0.036 Sum_probs=76.4
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCC---CceEEEEeCCHHHHHHH--HHhCCC-------CCcEEEEcCCCCC-CCCCCC
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVD---AKNVTILDQSPHQLAKA--KQKEPL-------KECTIIEGDAEDL-PFPTDY 178 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~---~~~v~g~D~s~~~~~~a--~~~~~~-------~~i~~~~~d~~~~-~~~~~~ 178 (340)
.++.+|||.|||+|.++..+++..+ ..+++|+|+++.+++.| +..... ....+...|+... .....+
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFAN 399 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCC
Confidence 3578999999999999999998864 35899999999999999 433221 1235555666542 234567
Q ss_pred ccEEEecCcccc-cC---------------------------C-HHHHHHHHHHhcccCcEEEEEccC
Q 019479 179 ADRYVSAGSIEY-WP---------------------------D-PQRGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 179 fD~v~~~~~l~~-~~---------------------------d-~~~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
||+|+++--+.. .. + ...++..+.+.|+|||++.++.+.
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEET
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEECh
Confidence 999999755521 11 1 124678899999999999988654
No 289
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.37 E-value=7.7e-07 Score=77.86 Aligned_cols=82 Identities=26% Similarity=0.288 Sum_probs=65.7
Q ss_pred HHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC-----CCC
Q 019479 102 DEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP-----FPT 176 (340)
Q Consensus 102 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~-----~~~ 176 (340)
...++.+.. +++..+||.+||.|..+..++++ +.+|+|+|.++.+++.|++ ...++++++++++.++. ...
T Consensus 12 ~e~le~L~~-~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~~~rv~lv~~~f~~l~~~L~~~g~ 87 (285)
T 1wg8_A 12 QEALDLLAV-RPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LHLPGLTVVQGNFRHLKRHLAALGV 87 (285)
T ss_dssp HHHHHHHTC-CTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TCCTTEEEEESCGGGHHHHHHHTTC
T ss_pred HHHHHhhCC-CCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hccCCEEEEECCcchHHHHHHHcCC
Confidence 344444433 46789999999999999999998 7899999999999999998 65578999999998753 223
Q ss_pred CCccEEEecCc
Q 019479 177 DYADRYVSAGS 187 (340)
Q Consensus 177 ~~fD~v~~~~~ 187 (340)
+++|.|++...
T Consensus 88 ~~vDgIL~DLG 98 (285)
T 1wg8_A 88 ERVDGILADLG 98 (285)
T ss_dssp SCEEEEEEECS
T ss_pred CCcCEEEeCCc
Confidence 57999997433
No 290
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.26 E-value=1.1e-06 Score=68.70 Aligned_cols=87 Identities=18% Similarity=0.203 Sum_probs=61.5
Q ss_pred CCCEEEEEcCccc-hHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCC-CCccEEEecCcccc
Q 019479 113 RNMRVVDVGGGTG-FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPT-DYADRYVSAGSIEY 190 (340)
Q Consensus 113 ~~~~vLDiGcG~G-~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~-~~fD~v~~~~~l~~ 190 (340)
++.+|||||||.| ..+..+++. .+.+|+++|+++.+++ +++.|+.+..... +.||+|++...
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~~-~g~~V~atDInp~Av~------------~v~dDiF~P~~~~Y~~~DLIYsirP--- 98 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRKH-SKVDLVLTDIKPSHGG------------IVRDDITSPRMEIYRGAALIYSIRP--- 98 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHHH-SCCEEEEECSSCSSTT------------EECCCSSSCCHHHHTTEEEEEEESC---
T ss_pred CCCcEEEEccCCChHHHHHHHHh-CCCeEEEEECCccccc------------eEEccCCCCcccccCCcCEEEEcCC---
Confidence 4679999999999 699999984 2889999999886654 8899998733211 47999987442
Q ss_pred cCCHHHHHHHHHHhcccCcEEEEEccC
Q 019479 191 WPDPQRGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 191 ~~d~~~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
-++.+..+.++++.. |.-++|....
T Consensus 99 P~El~~~i~~lA~~v--~adliI~pL~ 123 (153)
T 2k4m_A 99 PAEIHSSLMRVADAV--GARLIIKPLT 123 (153)
T ss_dssp CTTTHHHHHHHHHHH--TCEEEEECBT
T ss_pred CHHHHHHHHHHHHHc--CCCEEEEcCC
Confidence 234455555555543 5677776443
No 291
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.18 E-value=7.2e-06 Score=69.18 Aligned_cols=104 Identities=18% Similarity=0.146 Sum_probs=72.1
Q ss_pred CCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHH--HHhCCCCCcEEEEc-CCCCCCCCCCCccEEEecC
Q 019479 110 LFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKA--KQKEPLKECTIIEG-DAEDLPFPTDYADRYVSAG 186 (340)
Q Consensus 110 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a--~~~~~~~~i~~~~~-d~~~~~~~~~~fD~v~~~~ 186 (340)
...++.+|||+||++|.|+..++...+..+|+|+|+...-.+.- .+...++.++|+.+ |+..++ ..++|.|+|.-
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~--~~~~DtllcDI 152 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLP--PEKCDTLLCDI 152 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCC--CCCCSEEEECC
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecC--CccccEEEEec
Confidence 34578899999999999999988887667899999965432110 01234577999999 986554 36699999854
Q ss_pred cccccCCHH-------HHHHHHHHhcccCcEEEEEccC
Q 019479 187 SIEYWPDPQ-------RGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 187 ~l~~~~d~~-------~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
.= .-+++. .+|+-+.+.|++ |-+++-...
T Consensus 153 ge-Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~ 188 (267)
T 3p8z_A 153 GE-SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLN 188 (267)
T ss_dssp CC-CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESC
T ss_pred CC-CCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEcc
Confidence 43 334432 356666788998 676665433
No 292
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.17 E-value=6.1e-06 Score=75.42 Aligned_cols=107 Identities=17% Similarity=0.131 Sum_probs=78.9
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---------CCCCcEEEEcCCCCCC-CCCCCccE
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---------PLKECTIIEGDAEDLP-FPTDYADR 181 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---------~~~~i~~~~~d~~~~~-~~~~~fD~ 181 (340)
+++.+|||+++|.|.-+..+++..++..++++|+++.-++..+++. ...++.+...|...++ ...+.||.
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~ 226 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDR 226 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEEE
T ss_pred CCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCCE
Confidence 4789999999999999999998866678999999998888777542 1246788888886643 34568999
Q ss_pred EEecCc--------ccccCC------H----------HHHHHHHHHhcccCcEEEEEccCC
Q 019479 182 YVSAGS--------IEYWPD------P----------QRGIKEAYRVLKIGGKACVIGPVY 218 (340)
Q Consensus 182 v~~~~~--------l~~~~d------~----------~~~l~~~~~~LkpgG~l~i~~~~~ 218 (340)
|++.-- +..-++ . .++|.++.+.|||||+|+-.+...
T Consensus 227 VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl 287 (359)
T 4fzv_A 227 VLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSL 287 (359)
T ss_dssp EEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred EEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCC
Confidence 996311 111111 0 167889999999999988765443
No 293
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.15 E-value=8.8e-06 Score=69.73 Aligned_cols=103 Identities=17% Similarity=0.126 Sum_probs=63.8
Q ss_pred CCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC-CCc---EEEEc-CCCCCCCCCCCccEEEe
Q 019479 110 LFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-KEC---TIIEG-DAEDLPFPTDYADRYVS 184 (340)
Q Consensus 110 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~-~~i---~~~~~-d~~~~~~~~~~fD~v~~ 184 (340)
+++++.+|||+||+.|.|+..+++..+-..|.|.++.... . ....... .++ .|+++ |+.++ ...++|+|+|
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-~~P~~~~~~Gv~~i~~~~G~Df~~~--~~~~~DvVLS 145 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-EEPMLMQSYGWNIVTMKSGVDVFYK--PSEISDTLLC 145 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-CCCCCCCSTTGGGEEEECSCCGGGS--CCCCCSEEEE
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-cCCCcccCCCceEEEeeccCCccCC--CCCCCCEEEe
Confidence 6678999999999999999999887322234444443221 0 0000111 344 44446 99764 3557999998
Q ss_pred cCcccccCCH----H---HHHHHHHHhcccCc-EEEEEccC
Q 019479 185 AGSIEYWPDP----Q---RGIKEAYRVLKIGG-KACVIGPV 217 (340)
Q Consensus 185 ~~~l~~~~d~----~---~~l~~~~~~LkpgG-~l~i~~~~ 217 (340)
.-.-. ..+. . .+|.-+.++|+||| .+++-.+.
T Consensus 146 DMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 146 DIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp CCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 54432 2222 1 24666778999999 88776544
No 294
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.10 E-value=3.1e-05 Score=67.55 Aligned_cols=105 Identities=17% Similarity=0.124 Sum_probs=72.5
Q ss_pred CCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHH--HHhCCCCCcEEEEc-CCCCCCCCCCCccEEEecCc
Q 019479 111 FDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKA--KQKEPLKECTIIEG-DAEDLPFPTDYADRYVSAGS 187 (340)
Q Consensus 111 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a--~~~~~~~~i~~~~~-d~~~~~~~~~~fD~v~~~~~ 187 (340)
+.++.+|||+||++|.|+..++...+...|+|+|+...-.+.- -+...+..+.++.+ |+..++. .++|.|+|.-.
T Consensus 92 l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~--~~~D~ivcDig 169 (321)
T 3lkz_A 92 LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPS--ECCDTLLCDIG 169 (321)
T ss_dssp CCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCC--CCCSEEEECCC
T ss_pred CCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCC--CCCCEEEEECc
Confidence 3577899999999999999888886557899999965411100 01122344778877 8866653 66999998665
Q ss_pred ccccCCHH-------HHHHHHHHhcccC-cEEEEEccCC
Q 019479 188 IEYWPDPQ-------RGIKEAYRVLKIG-GKACVIGPVY 218 (340)
Q Consensus 188 l~~~~d~~-------~~l~~~~~~Lkpg-G~l~i~~~~~ 218 (340)
..-+++. .+|+-+.+.|++| |-+++-....
T Consensus 170 -eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 170 -ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp -CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred -cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 6555553 3566667889998 8777754433
No 295
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.03 E-value=1.6e-05 Score=70.17 Aligned_cols=122 Identities=15% Similarity=0.129 Sum_probs=85.0
Q ss_pred CCCEEEEEcCccchHHHHHHHhC-----CCceEEEEeCCHH--------------------------HHHHHHHh---CC
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHV-----DAKNVTILDQSPH--------------------------QLAKAKQK---EP 158 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~-----~~~~v~g~D~s~~--------------------------~~~~a~~~---~~ 158 (340)
.+..|||+|+..|..+..++... ++.+++++|..+. ..+.++++ ..
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 46799999999999998887754 3688999996421 24445544 22
Q ss_pred --CCCcEEEEcCCCC-CC-CCCCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcC
Q 019479 159 --LKECTIIEGDAED-LP-FPTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLF 234 (340)
Q Consensus 159 --~~~i~~~~~d~~~-~~-~~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~ 234 (340)
.++++++.+|+.+ ++ ++.++||+|++-.-.+ ......|+.+.+.|+|||.+++-+... +..
T Consensus 186 l~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y--~~~~~~Le~~~p~L~pGGiIv~DD~~~---~~G---------- 250 (282)
T 2wk1_A 186 LLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLY--ESTWDTLTNLYPKVSVGGYVIVDDYMM---CPP---------- 250 (282)
T ss_dssp CCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSH--HHHHHHHHHHGGGEEEEEEEEESSCTT---CHH----------
T ss_pred CCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCcc--ccHHHHHHHHHhhcCCCEEEEEcCCCC---CHH----------
Confidence 3789999999954 44 3457899999865321 123468999999999999887766421 110
Q ss_pred CCHHHHHHHHHHCCCc
Q 019479 235 PKEEEYIEWFQKAGFK 250 (340)
Q Consensus 235 ~~~~~~~~~l~~aGF~ 250 (340)
..+.+.+.+++.|..
T Consensus 251 -~~~Av~Ef~~~~~i~ 265 (282)
T 2wk1_A 251 -CKDAVDEYRAKFDIA 265 (282)
T ss_dssp -HHHHHHHHHHHTTCC
T ss_pred -HHHHHHHHHHhcCCc
Confidence 134566777887865
No 296
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=98.00 E-value=4.6e-07 Score=101.63 Aligned_cols=142 Identities=23% Similarity=0.201 Sum_probs=70.0
Q ss_pred CCCEEEEEcCccchHHHHHHHhCC-----CceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCC-CCCCCCccEEEecC
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVD-----AKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDL-PFPTDYADRYVSAG 186 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~-----~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~-~~~~~~fD~v~~~~ 186 (340)
+..+|||||.|+|..+..+.+... ..+++..|+|+...+.+++++..-+++....|..+. ++...+||+|++.+
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~ 1319 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNC 1319 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEEC
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEcc
Confidence 567999999999987766665542 247899999988877777553211222222233331 33456799999999
Q ss_pred cccccCCHHHHHHHHHHhcccCcEEEEEccCCCchhHh---hHhh---hHhhcCCCHHHHHHHHHHCCCcEEEEE
Q 019479 187 SIEYWPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLS---RFFA---DVWMLFPKEEEYIEWFQKAGFKDVKLK 255 (340)
Q Consensus 187 ~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~l~~aGF~~v~~~ 255 (340)
++|..++....|+++++.|||||++++.+.... .+.. .++. ..+....+.++|.++|.++||..+...
T Consensus 1320 vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~~~~-~~~g~~~~~~~~~~r~~~~~~~~~~w~~~l~~~gf~~~~~~ 1393 (2512)
T 2vz8_A 1320 ALATLGDPAVAVGNMAATLKEGGFLLLHTLLAG-HPLGEMVGFLTSPEQGGRHLLSQDQWESLFAGASLHLVALK 1393 (2512)
T ss_dssp C--------------------CCEEEEEEC---------------------------CTTTTSSTTTTEEEEEEE
T ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEecccc-ccccccccccccccccCCcccCHHHHHHHHHhCCCceeeec
Confidence 999888899999999999999999988764321 0000 0000 011123466778888999999987764
No 297
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.81 E-value=2e-05 Score=70.60 Aligned_cols=86 Identities=20% Similarity=0.186 Sum_probs=66.3
Q ss_pred HHHhccccCCCCCCCEEEEEcCccchHHHHHHHhC-CCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC-----C
Q 019479 101 RDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP-----F 174 (340)
Q Consensus 101 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~-----~ 174 (340)
..+.++.+.. +++..++|..||.|..+..+++.+ |.++|+|+|.++.+++.++ ++...+++++++++.++. .
T Consensus 46 l~Evl~~L~i-~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~~~Rv~lv~~nF~~l~~~L~~~ 123 (347)
T 3tka_A 46 LDEAVNGLNI-RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TIDDPRFSIIHGPFSALGEYVAER 123 (347)
T ss_dssp THHHHHHTCC-CTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCCCTTEEEEESCGGGHHHHHHHT
T ss_pred HHHHHHhhCC-CCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhcCCcEEEEeCCHHHHHHHHHhc
Confidence 3444444443 478899999999999999999986 5689999999999999995 555578999999997753 1
Q ss_pred C-CCCccEEEecCcc
Q 019479 175 P-TDYADRYVSAGSI 188 (340)
Q Consensus 175 ~-~~~fD~v~~~~~l 188 (340)
. .+++|.|+....+
T Consensus 124 g~~~~vDgILfDLGV 138 (347)
T 3tka_A 124 DLIGKIDGILLDLGV 138 (347)
T ss_dssp TCTTCEEEEEEECSC
T ss_pred CCCCcccEEEECCcc
Confidence 1 1369999976444
No 298
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.75 E-value=0.00012 Score=70.50 Aligned_cols=116 Identities=18% Similarity=0.144 Sum_probs=78.3
Q ss_pred HHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCC-------------CceEEEEeCCHHHHHHHHHhC---CCCCcE
Q 019479 100 MRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVD-------------AKNVTILDQSPHQLAKAKQKE---PLKECT 163 (340)
Q Consensus 100 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-------------~~~v~g~D~s~~~~~~a~~~~---~~~~i~ 163 (340)
+...+...+.. ..+.+|+|-+||+|.+...+.+... ...++|+|+++.+...|+-+. ......
T Consensus 205 Vv~lmv~l~~p-~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~ 283 (530)
T 3ufb_A 205 VVRFMVEVMDP-QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPR 283 (530)
T ss_dssp HHHHHHHHHCC-CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCE
T ss_pred HHHHHHHhhcc-CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCcccc
Confidence 33333443333 4678999999999999887765321 246999999999999998651 223345
Q ss_pred EEEcCCCCCCC----CCCCccEEEecCcccccC---------------CH-HHHHHHHHHhcc-------cCcEEEEEcc
Q 019479 164 IIEGDAEDLPF----PTDYADRYVSAGSIEYWP---------------DP-QRGIKEAYRVLK-------IGGKACVIGP 216 (340)
Q Consensus 164 ~~~~d~~~~~~----~~~~fD~v~~~~~l~~~~---------------d~-~~~l~~~~~~Lk-------pgG~l~i~~~ 216 (340)
+..+|....+. ...+||+|+++--+..-. +. ..++..+.+.|| |||++.++.+
T Consensus 284 I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP 363 (530)
T 3ufb_A 284 IDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVP 363 (530)
T ss_dssp EECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEE
T ss_pred ccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEec
Confidence 67787754432 234799999976553211 11 156788888887 7999988865
No 299
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.69 E-value=0.00018 Score=65.09 Aligned_cols=142 Identities=12% Similarity=0.136 Sum_probs=98.9
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC------------------------CCCcEEEEcC
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP------------------------LKECTIIEGD 168 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~------------------------~~~i~~~~~d 168 (340)
+...|+.+|||.......+....++.+++-+|. |++++.-++.+. ..+..++.+|
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 467899999999999999888766789999999 888777665421 2568889999
Q ss_pred CCCCC--------C-CCCCccEEEecCcccccCCHH--HHHHHHHHhcccCcEEEEEccCCC---chhHhh-H---hhh-
Q 019479 169 AEDLP--------F-PTDYADRYVSAGSIEYWPDPQ--RGIKEAYRVLKIGGKACVIGPVYP---TFWLSR-F---FAD- 229 (340)
Q Consensus 169 ~~~~~--------~-~~~~fD~v~~~~~l~~~~d~~--~~l~~~~~~LkpgG~l~i~~~~~~---~~~~~~-~---~~~- 229 (340)
+.+.. . ......++++-.++.+++... ++++.+.+.. |+|.+++.+...+ .....+ + +..
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~~~~~~fg~~m~~~l~~~ 254 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGSQPNDRFGAIMQSNLKES 254 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCCSTTCCHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCCCCcchHHHHHHHHhhcc
Confidence 97631 1 224468899999999996553 6788888776 7888776665443 111111 1 111
Q ss_pred H---h---hcCCCHHHHHHHHHHCCCcEEEEEEeC
Q 019479 230 V---W---MLFPKEEEYIEWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 230 ~---~---~~~~~~~~~~~~l~~aGF~~v~~~~~~ 258 (340)
. + ..+.+.++..+.|.++||+ ...++.
T Consensus 255 rg~~l~~~~~y~s~~~~~~rl~~~Gf~--~a~d~~ 287 (334)
T 1rjd_A 255 RNLEMPTLMTYNSKEKYASRWSAAPNV--IVNDMW 287 (334)
T ss_dssp HCCCCTTTTTTCSHHHHHGGGTTSSEE--EEEEHH
T ss_pred cCCcccccccCCCHHHHHHHHHHCCCC--cccCHH
Confidence 0 1 1246899999999999997 455554
No 300
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.52 E-value=0.00014 Score=64.87 Aligned_cols=58 Identities=16% Similarity=0.151 Sum_probs=47.8
Q ss_pred chHHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC
Q 019479 96 WTEDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE 157 (340)
Q Consensus 96 ~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~ 157 (340)
....+...++.... .++..|||++||+|..+..+++. +.+++|+|+++.+++.|++++
T Consensus 220 ~p~~l~~~~i~~~~--~~~~~vlD~f~GsGt~~~~a~~~--g~~~~g~e~~~~~~~~a~~r~ 277 (297)
T 2zig_A 220 FPLELAERLVRMFS--FVGDVVLDPFAGTGTTLIAAARW--GRRALGVELVPRYAQLAKERF 277 (297)
T ss_dssp SCHHHHHHHHHHHC--CTTCEEEETTCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhC--CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHH
Confidence 34456666666544 47889999999999999998887 789999999999999999773
No 301
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.43 E-value=0.00034 Score=63.63 Aligned_cols=74 Identities=15% Similarity=0.214 Sum_probs=57.8
Q ss_pred HHHHHhccccCCCC-----CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCC
Q 019479 99 DMRDEALEPADLFD-----RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDL 172 (340)
Q Consensus 99 ~~~~~~l~~~~~~~-----~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~ 172 (340)
.+.+.+++.+...+ ++..|||||.|.|.++..+++.....+|+++|+++..+...++....++++++.+|+.++
T Consensus 39 ~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 39 TVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPYDW 117 (353)
T ss_dssp HHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTTCH
T ss_pred HHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhccCCCEEEEECCccch
Confidence 34455555444322 368999999999999999998744568999999999999998876557899999999654
No 302
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.22 E-value=0.0016 Score=57.68 Aligned_cols=125 Identities=14% Similarity=0.145 Sum_probs=78.6
Q ss_pred CCCEEEEEcCccchHHHHHH----HhCCCc--eEEEEeCCH------------HHHHHHHHhC---CCCC--cEEEEcCC
Q 019479 113 RNMRVVDVGGGTGFTTLGIV----KHVDAK--NVTILDQSP------------HQLAKAKQKE---PLKE--CTIIEGDA 169 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~----~~~~~~--~v~g~D~s~------------~~~~~a~~~~---~~~~--i~~~~~d~ 169 (340)
+.-+|||+|-|+|.+..... +..|.. +++.+|..+ +..+...+.. ...+ +++..+|+
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 34689999999998765433 233454 456666421 1122222221 1233 45678888
Q ss_pred CC-CC-CCCCCccEEEecCcccccCCH----HHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHH
Q 019479 170 ED-LP-FPTDYADRYVSAGSIEYWPDP----QRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEW 243 (340)
Q Consensus 170 ~~-~~-~~~~~fD~v~~~~~l~~~~d~----~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (340)
.+ ++ +.+..||+++... +..-.+| ..+++.++++++|||.+.-- .....++..
T Consensus 176 ~~~l~~l~~~~~Da~flDg-FsP~kNPeLWs~e~f~~l~~~~~pgg~laTY--------------------taag~VRR~ 234 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDA-FSPYKNPELWTLDFLSLIKERIDEKGYWVSY--------------------SSSLSVRKS 234 (308)
T ss_dssp HHHGGGCCSCCEEEEEECC-SCTTTSGGGGSHHHHHHHHTTEEEEEEEEES--------------------CCCHHHHHH
T ss_pred HHHHhhhcccceeEEEeCC-CCcccCcccCCHHHHHHHHHHhCCCcEEEEE--------------------eCcHHHHHH
Confidence 54 33 3445799999743 3333444 38999999999999998521 133567789
Q ss_pred HHHCCCcEEEEEEeC
Q 019479 244 FQKAGFKDVKLKRIG 258 (340)
Q Consensus 244 l~~aGF~~v~~~~~~ 258 (340)
|+++||++.++...+
T Consensus 235 L~~aGF~V~k~~G~g 249 (308)
T 3vyw_A 235 LLTLGFKVGSSREIG 249 (308)
T ss_dssp HHHTTCEEEEEECC-
T ss_pred HHHCCCEEEecCCCC
Confidence 999999988776654
No 303
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.21 E-value=0.0024 Score=55.68 Aligned_cols=116 Identities=14% Similarity=0.036 Sum_probs=73.4
Q ss_pred CCCCCEEEEEcC------ccchHHHHHHHhCCC-ceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEE
Q 019479 111 FDRNMRVVDVGG------GTGFTTLGIVKHVDA-KNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYV 183 (340)
Q Consensus 111 ~~~~~~vLDiGc------G~G~~~~~l~~~~~~-~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~ 183 (340)
.+.+.+|||+|+ -.|.+ .+.+..|. +.|+++|+.+-.. ..+ .++++|..... ...+||+|+
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~s--------da~-~~IqGD~~~~~-~~~k~DLVI 174 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVS--------DAD-STLIGDCATVH-TANKWDLII 174 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBC--------SSS-EEEESCGGGEE-ESSCEEEEE
T ss_pred ecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCccccc--------CCC-eEEEccccccc-cCCCCCEEE
Confidence 357999999996 56774 33344564 6999999966331 122 45899976543 347799999
Q ss_pred ecCcc---cc--cCC-----H-HHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEE
Q 019479 184 SAGSI---EY--WPD-----P-QRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDV 252 (340)
Q Consensus 184 ~~~~l---~~--~~d-----~-~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v 252 (340)
+-..- .+ .+. . +.++.=+.++|+|||.+++-.+.... .+.+.++. + -|+.+
T Consensus 175 SDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg----------------~~~L~~lr-k-~F~~V 236 (344)
T 3r24_A 175 SDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW----------------NADLYKLM-G-HFSWW 236 (344)
T ss_dssp ECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC----------------CHHHHHHH-T-TEEEE
T ss_pred ecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC----------------HHHHHHHH-h-hCCeE
Confidence 84221 11 111 1 35677788899999999887543321 12333433 3 88888
Q ss_pred EEEE
Q 019479 253 KLKR 256 (340)
Q Consensus 253 ~~~~ 256 (340)
++..
T Consensus 237 K~fK 240 (344)
T 3r24_A 237 TAFV 240 (344)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 7774
No 304
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.01 E-value=0.0013 Score=57.60 Aligned_cols=124 Identities=14% Similarity=0.136 Sum_probs=91.3
Q ss_pred CCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCC-CCcEEEEcCCCC-CC---CCCCCccEEEecCcc
Q 019479 114 NMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL-KECTIIEGDAED-LP---FPTDYADRYVSAGSI 188 (340)
Q Consensus 114 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~-~~i~~~~~d~~~-~~---~~~~~fD~v~~~~~l 188 (340)
+..+||+=+|+|.+++.+++. +.+++.+|.++..++..+++... .+++++..|... +. -+..+||+|++--..
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~--~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPY 169 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRS--QDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSY 169 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCT--TSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECCCC
T ss_pred CCCceeEeCCcHHHHHHHcCC--CCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECCCC
Confidence 456899999999999998884 68999999999999999988653 568999999643 21 234569999997776
Q ss_pred cccCCHHHHHHHHHH--hcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEE
Q 019479 189 EYWPDPQRGIKEAYR--VLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVK 253 (340)
Q Consensus 189 ~~~~d~~~~l~~~~~--~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~ 253 (340)
+.-.+...+++.+.+ .+.|+|.+++.-|...... .+.+.+-|++.|.....
T Consensus 170 e~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~~~~--------------~~~~~~~l~~~~~~~l~ 222 (283)
T 2oo3_A 170 ERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAW--------------TEQFLRKMREISSKSVR 222 (283)
T ss_dssp CSTTHHHHHHHHHHHHHHHCTTSEEEEEEEESSHHH--------------HHHHHHHHHHHCSSEEE
T ss_pred CCCcHHHHHHHHHHHhCccCCCeEEEEEEeccchHH--------------HHHHHHHHHhcCCCeEE
Confidence 644456677766665 4568999999877655321 34555667777774333
No 305
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.99 E-value=0.0046 Score=55.24 Aligned_cols=141 Identities=14% Similarity=0.202 Sum_probs=93.4
Q ss_pred CCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC------CCCcEEEEcCCCCCC--------CCCCCc
Q 019479 114 NMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP------LKECTIIEGDAEDLP--------FPTDYA 179 (340)
Q Consensus 114 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~------~~~i~~~~~d~~~~~--------~~~~~f 179 (340)
...|+++|||-=..+..+.. .++.+++=+|. |.+++..++.+. ..+..++.+|+.+-. +....-
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~-~~~~~v~evD~-P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~P 180 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDW-PTGTTVYEIDQ-PKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPSAR 180 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCC-CTTCEEEEEEC-HHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTTSC
T ss_pred CCeEEEeCCCCCchhhhccC-CCCcEEEEcCC-HHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCCCC
Confidence 45799999997666544432 12478999996 999988887642 456788999997611 111223
Q ss_pred cEEEecCcccccCCH--HHHHHHHHHhcccCcEEEEEccCCCch-h---Hh----hHhhhH----------hhcCCC-HH
Q 019479 180 DRYVSAGSIEYWPDP--QRGIKEAYRVLKIGGKACVIGPVYPTF-W---LS----RFFADV----------WMLFPK-EE 238 (340)
Q Consensus 180 D~v~~~~~l~~~~d~--~~~l~~~~~~LkpgG~l~i~~~~~~~~-~---~~----~~~~~~----------~~~~~~-~~ 238 (340)
=++++-.+++++++. ..+++.+...+.||+.|++........ . .. ..+... +....+ .+
T Consensus 181 t~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~ 260 (310)
T 2uyo_A 181 TAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPLHGDEWREQMQLRFRRVSDALGFEQAVDVQELIYHDENRA 260 (310)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCTTCSHHHHHHHHHHHHHHC-----------CCTTCCTTCC
T ss_pred EEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCCCCcchhHHHHHHHHHHHHHcCCcCCCCccccccCCCChH
Confidence 478888999999765 378889988889999988876443211 1 01 111111 111225 78
Q ss_pred HHHHHHHHCCCcEEEEEEe
Q 019479 239 EYIEWFQKAGFKDVKLKRI 257 (340)
Q Consensus 239 ~~~~~l~~aGF~~v~~~~~ 257 (340)
+..++|.+.||+.+ ....
T Consensus 261 ~~~~~f~~~G~~~~-~~~~ 278 (310)
T 2uyo_A 261 VVADWLNRHGWRAT-AQSA 278 (310)
T ss_dssp CHHHHHTTTTEEEE-EEEH
T ss_pred HHHHHHHHCcCccc-cCCH
Confidence 89999999999988 4444
No 306
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.85 E-value=0.0014 Score=57.08 Aligned_cols=57 Identities=19% Similarity=0.179 Sum_probs=47.0
Q ss_pred HHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC
Q 019479 98 EDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP 158 (340)
Q Consensus 98 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~ 158 (340)
..+...++.... .++..|||..||+|..+....+. +.+++|+|+++..++.+++++.
T Consensus 199 ~~l~~~~i~~~~--~~~~~vlD~f~GsGtt~~~a~~~--gr~~ig~e~~~~~~~~~~~r~~ 255 (260)
T 1g60_A 199 RDLIERIIRASS--NPNDLVLDCFMGSGTTAIVAKKL--GRNFIGCDMNAEYVNQANFVLN 255 (260)
T ss_dssp HHHHHHHHHHHC--CTTCEEEESSCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC--CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHH
Confidence 455555555443 47889999999999999998887 7899999999999999998754
No 307
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.85 E-value=0.034 Score=51.01 Aligned_cols=129 Identities=10% Similarity=0.040 Sum_probs=82.2
Q ss_pred CEEEEEcCccchHHHHHHHhCCCc-eEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCC--------CCCCccEEEec
Q 019479 115 MRVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPF--------PTDYADRYVSA 185 (340)
Q Consensus 115 ~~vLDiGcG~G~~~~~l~~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~--------~~~~fD~v~~~ 185 (340)
.+|+|+-||.|.++..+.+. +. .+.++|+++.+++..+.+. ++..++++|+.++.. ....+|+|+..
T Consensus 3 ~~vidLFsG~GGlslG~~~a--G~~~v~avE~d~~a~~t~~~N~--~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~gg 78 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA--GFDVKMAVEIDQHAINTHAINF--PRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGG 78 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH--TCEEEEEECSCHHHHHHHHHHC--TTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEEC
T ss_pred CeEEEEccCcCHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHhC--CCCceEecChhhcCHHHHHhhcccCCCeeEEEec
Confidence 58999999999999999887 55 4669999999999988775 356788899977531 24579999986
Q ss_pred CcccccC--------CHH-HHHH---HHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEE
Q 019479 186 GSIEYWP--------DPQ-RGIK---EAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVK 253 (340)
Q Consensus 186 ~~l~~~~--------d~~-~~l~---~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~ 253 (340)
.-...+. |.. .++. ++.+.++|. +++.+.+..-..... . ...+.+. .|++.||.++.
T Consensus 79 pPCQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P~--~~v~ENV~gl~s~~~--~------~~~~~i~-~l~~~GY~v~~ 147 (376)
T 3g7u_A 79 PPCQGFSSIGKGNPDDSRNQLYMHFYRLVSELQPL--FFLAENVPGIMQEKY--S------GIRNKAF-NLVSGDYDILD 147 (376)
T ss_dssp CCCCTTC-------CHHHHHHHHHHHHHHHHHCCS--EEEEEECTTTTCGGG--H------HHHHHHH-HHHHTTEEECC
T ss_pred CCCCCcccccCCCCCCchHHHHHHHHHHHHHhCCC--EEEEecchHhhccCc--H------HHHHHHH-HHHcCCCccCc
Confidence 5544332 322 2333 344455773 444443322110000 0 0235666 88999998733
Q ss_pred EEEeC
Q 019479 254 LKRIG 258 (340)
Q Consensus 254 ~~~~~ 258 (340)
...+.
T Consensus 148 ~~vl~ 152 (376)
T 3g7u_A 148 PIKVK 152 (376)
T ss_dssp CEEEE
T ss_pred EEEEE
Confidence 34443
No 308
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=96.73 E-value=0.052 Score=48.82 Aligned_cols=147 Identities=13% Similarity=0.108 Sum_probs=96.8
Q ss_pred CCCEEEEEcCccchHHHHHHHh-CCCceEEEEeCCHHHHHHHHHhC--------------------------CCCCcEEE
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKH-VDAKNVTILDQSPHQLAKAKQKE--------------------------PLKECTII 165 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~g~D~s~~~~~~a~~~~--------------------------~~~~i~~~ 165 (340)
+...|+-+|||.-.....+... .++.+++=+|. |+.++.-++.+ ...+..++
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v 168 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVI 168 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEE
Confidence 4578999999988777777664 24678999999 77766543321 13567788
Q ss_pred EcCCCCCC----------CCCCCccEEEecCcccccCCH--HHHHHHHHHhcccCcEEEEEccCCCchhHhhHh-hhH--
Q 019479 166 EGDAEDLP----------FPTDYADRYVSAGSIEYWPDP--QRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFF-ADV-- 230 (340)
Q Consensus 166 ~~d~~~~~----------~~~~~fD~v~~~~~l~~~~d~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~-~~~-- 230 (340)
..|+.+.. +....-=++++-.++.+++.. ..+++.+.+.. |+|.+++.++..+.....+.. ...
T Consensus 169 ~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f-~~~~~i~yE~i~p~d~fg~~M~~~l~~ 247 (334)
T 3iei_A 169 GADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSF-ERAMFINYEQVNMGDRFGQIMIENLRR 247 (334)
T ss_dssp ECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCTTSHHHHHHHHHHHT
T ss_pred ccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhC-CCceEEEEeccCCCCHHHHHHHHHHHH
Confidence 99986521 222334578888899998654 36788887766 456666666554433222211 111
Q ss_pred -------hhcCCCHHHHHHHHHHCCCcEEEEEEeCCcc
Q 019479 231 -------WMLFPKEEEYIEWFQKAGFKDVKLKRIGPKW 261 (340)
Q Consensus 231 -------~~~~~~~~~~~~~l~~aGF~~v~~~~~~~~~ 261 (340)
...+.+.++..+.|.++||+.++..++...|
T Consensus 248 ~g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~~d~~~~~ 285 (334)
T 3iei_A 248 RQCDLAGVETCKSLESQKERLLSNGWETASAVDMMELY 285 (334)
T ss_dssp TTCCCTTGGGGGCHHHHHHHHHTTTCSEEEEEEHHHHH
T ss_pred hCCCCcccccCCCHHHHHHHHHHcCCCcceeecHHHHH
Confidence 1124578999999999999998888775443
No 309
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.72 E-value=0.036 Score=49.83 Aligned_cols=132 Identities=12% Similarity=0.074 Sum_probs=86.4
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCC---ceE-EEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC---CCCCCccEEEec
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDA---KNV-TILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP---FPTDYADRYVSA 185 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~---~~v-~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~---~~~~~fD~v~~~ 185 (340)
...+++|+-||.|.++.-+.+. + ..+ .++|+++.+++..+.+.... ++.+|+.++. ++...+|+++..
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~a--G~~~~~v~~a~e~d~~a~~ty~~N~~~~---~~~~DI~~~~~~~i~~~~~Dil~gg 83 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERS--SININATFIPFDINEIANKIYSKNFKEE---VQVKNLDSISIKQIESLNCNTWFMS 83 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHS--SCCCCEEEEEECCCHHHHHHHHHHHCCC---CBCCCTTTCCHHHHHHTCCCEEEEC
T ss_pred CCCEEEEECCChhHHHHHHHHc--CCCceEEEEEEECCHHHHHHHHHHCCCC---cccCChhhcCHHHhccCCCCEEEec
Confidence 4568999999999999998876 4 345 69999999999988775432 5678887764 222358999986
Q ss_pred Cccccc-----------CCHH-HHHHHHHH-hccc---CcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCC
Q 019479 186 GSIEYW-----------PDPQ-RGIKEAYR-VLKI---GGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGF 249 (340)
Q Consensus 186 ~~l~~~-----------~d~~-~~l~~~~~-~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF 249 (340)
.-...+ .|.. ..+.++.+ +++. .-.+++.+.+..-.. . .+.+.+.+.|++.||
T Consensus 84 pPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~~-~----------~~~~~i~~~l~~~GY 152 (327)
T 3qv2_A 84 PPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLFKE-S----------LVFKEIYNILIKNQY 152 (327)
T ss_dssp CCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGGGG-S----------HHHHHHHHHHHHTTC
T ss_pred CCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhhcC-h----------HHHHHHHHHHHhCCC
Confidence 554444 3443 45666666 5542 235555554432110 0 134678889999999
Q ss_pred cEEEEEEeCCcc
Q 019479 250 KDVKLKRIGPKW 261 (340)
Q Consensus 250 ~~v~~~~~~~~~ 261 (340)
.+.. ..+....
T Consensus 153 ~v~~-~vl~a~~ 163 (327)
T 3qv2_A 153 YIKD-IICSPID 163 (327)
T ss_dssp EEEE-EEECGGG
T ss_pred EEEE-EEEeHHH
Confidence 8643 3444433
No 310
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.63 E-value=0.0014 Score=60.13 Aligned_cols=96 Identities=22% Similarity=0.256 Sum_probs=66.9
Q ss_pred CCCCEEEEEcCcc-chHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCC-----CCCCCCccEEEec
Q 019479 112 DRNMRVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDL-----PFPTDYADRYVSA 185 (340)
Q Consensus 112 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~-----~~~~~~fD~v~~~ 185 (340)
+++.+||.+|+|. |..+..+++.....+|+++|.+++..+.+++.... .++..+-.++ ....+.+|+|+-.
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~---~vi~~~~~~~~~~~~~~~~gg~D~vid~ 265 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGAT---HVINSKTQDPVAAIKEITDGGVNFALES 265 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCS---EEEETTTSCHHHHHHHHTTSCEEEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCC---EEecCCccCHHHHHHHhcCCCCcEEEEC
Confidence 5789999999986 88888888876333799999999999999865321 1222111110 0122369999854
Q ss_pred CcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 186 GSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 186 ~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
.. ....++.+.+.|++||++++...
T Consensus 266 ~g------~~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 266 TG------SPEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp SC------CHHHHHHHHHTEEEEEEEEECCC
T ss_pred CC------CHHHHHHHHHHHhcCCEEEEeCC
Confidence 32 23568889999999999988754
No 311
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.51 E-value=0.019 Score=51.99 Aligned_cols=131 Identities=14% Similarity=0.162 Sum_probs=81.0
Q ss_pred CCEEEEEcCccchHHHHHHHhCCC---ceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCC---CCCCccEEEecCc
Q 019479 114 NMRVVDVGGGTGFTTLGIVKHVDA---KNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPF---PTDYADRYVSAGS 187 (340)
Q Consensus 114 ~~~vLDiGcG~G~~~~~l~~~~~~---~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~---~~~~fD~v~~~~~ 187 (340)
..+|+|+-||.|.++..+.+. + ..|.++|+++.+++..+.+.. +..++++|+.++.. +...+|+++...-
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~--G~~~~~v~~~E~d~~a~~~~~~N~~--~~~~~~~Di~~~~~~~~~~~~~D~l~~gpP 77 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRES--CIPAQVVAAIDVNTVANEVYKYNFP--HTQLLAKTIEGITLEEFDRLSFDMILMSPP 77 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHH--TCSEEEEEEECCCHHHHHHHHHHCT--TSCEECSCGGGCCHHHHHHHCCSEEEECCC
T ss_pred CCeEEEeCcCccHHHHHHHHC--CCCceEEEEEeCCHHHHHHHHHhcc--ccccccCCHHHccHhHcCcCCcCEEEEcCC
Confidence 358999999999999999887 4 368999999999999998864 34578899877541 1125899998655
Q ss_pred cccc---------CCHH-HHHHHHHHh---cc--cCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEE
Q 019479 188 IEYW---------PDPQ-RGIKEAYRV---LK--IGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDV 252 (340)
Q Consensus 188 l~~~---------~d~~-~~l~~~~~~---Lk--pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v 252 (340)
...+ .|.. ..+.++.++ ++ |. +++.+.+..-. .. .+.+.+.+.|++.||.+.
T Consensus 78 Cq~fS~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P~--~~~~ENV~~l~-~~----------~~~~~i~~~l~~~GY~v~ 144 (343)
T 1g55_A 78 CQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPK--YILLENVKGFE-VS----------STRDLLIQTIENCGFQYQ 144 (343)
T ss_dssp ------------------CHHHHHHHHGGGCSSCCS--EEEEEEETTGG-GS----------HHHHHHHHHHHHTTEEEE
T ss_pred CcchhhcCCcCCccCccchHHHHHHHHHHHhcCCCC--EEEEeCCcccc-CH----------HHHHHHHHHHHHCCCeeE
Confidence 3332 2222 234444444 44 43 33343332210 00 134677888999999864
Q ss_pred EEEEeCCccc
Q 019479 253 KLKRIGPKWY 262 (340)
Q Consensus 253 ~~~~~~~~~~ 262 (340)
. ..+....|
T Consensus 145 ~-~vl~a~~~ 153 (343)
T 1g55_A 145 E-FLLSPTSL 153 (343)
T ss_dssp E-EEECGGGG
T ss_pred E-EEEEHHHC
Confidence 3 34444433
No 312
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.42 E-value=0.011 Score=54.76 Aligned_cols=100 Identities=19% Similarity=0.213 Sum_probs=68.5
Q ss_pred CCCCEEEEEcCcc-chHHHHHHHhCCCc-eEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCC-C-----C-CCCCccEE
Q 019479 112 DRNMRVVDVGGGT-GFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDL-P-----F-PTDYADRY 182 (340)
Q Consensus 112 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~-~-----~-~~~~fD~v 182 (340)
.++.+||.+|+|. |..+..+++.. +. +|+++|.+++.++.+++.- ..++..+-.+. . . ....+|+|
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~lG----a~~i~~~~~~~~~~~~~~~~~g~g~Dvv 258 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLL-GAACVIVGDQNPERLKLLSDAG----FETIDLRNSAPLRDQIDQILGKPEVDCG 258 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHHTTT----CEEEETTSSSCHHHHHHHHHSSSCEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcC----CcEEcCCCcchHHHHHHHHhCCCCCCEE
Confidence 5789999999986 88899999876 55 9999999999999987542 22222211111 0 1 12269999
Q ss_pred EecCccccc--------CCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 183 VSAGSIEYW--------PDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 183 ~~~~~l~~~--------~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
+-...-... .++...++.+.+.|++||++++...
T Consensus 259 id~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 259 VDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp EECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred EECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecc
Confidence 865443210 0123578899999999999987654
No 313
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.35 E-value=0.024 Score=52.31 Aligned_cols=101 Identities=23% Similarity=0.271 Sum_probs=69.9
Q ss_pred CCCCEEEEEcCcc-chHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCC-C-----CC-CCCCccEEE
Q 019479 112 DRNMRVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAED-L-----PF-PTDYADRYV 183 (340)
Q Consensus 112 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~-~-----~~-~~~~fD~v~ 183 (340)
+++.+||-+|+|. |..+..+++..+..+|+++|.+++.++.+++.-. +.+..+-.+ + .. ....+|+|+
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa----~~i~~~~~~~~~~~v~~~t~g~g~Dvvi 259 (398)
T 1kol_A 184 GPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGF----EIADLSLDTPLHEQIAALLGEPEVDCAV 259 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC----EEEETTSSSCHHHHHHHHHSSSCEEEEE
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCC----cEEccCCcchHHHHHHHHhCCCCCCEEE
Confidence 5789999999975 8889999998633489999999999999976422 222211111 0 01 123699999
Q ss_pred ecCccc---------ccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 184 SAGSIE---------YWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 184 ~~~~l~---------~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
-..... +.+++...++.+.+.|++||++++...
T Consensus 260 d~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 260 DAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp ECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred ECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 654422 233455678999999999999987653
No 314
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.26 E-value=0.023 Score=51.67 Aligned_cols=97 Identities=23% Similarity=0.181 Sum_probs=68.3
Q ss_pred CCCCEEEEEcCcc-chHHHHHHHhCCCce-EEEEeCCHHHHHHHHHhCCCCCcEEEEcCCC--CC-----C-CCCCCccE
Q 019479 112 DRNMRVVDVGGGT-GFTTLGIVKHVDAKN-VTILDQSPHQLAKAKQKEPLKECTIIEGDAE--DL-----P-FPTDYADR 181 (340)
Q Consensus 112 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~-v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~--~~-----~-~~~~~fD~ 181 (340)
+++.+||-+|+|. |..+..+++.. +.+ |+++|.+++..+.+++. ...-+.+...+.. ++ . .....+|+
T Consensus 178 ~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dv 255 (363)
T 3m6i_A 178 RLGDPVLICGAGPIGLITMLCAKAA-GACPLVITDIDEGRLKFAKEI-CPEVVTHKVERLSAEESAKKIVESFGGIEPAV 255 (363)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESCHHHHHHHHHH-CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-chhcccccccccchHHHHHHHHHHhCCCCCCE
Confidence 5788999999975 88889999886 554 99999999999999987 4333333321111 10 0 12346999
Q ss_pred EEecCcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 182 YVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 182 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
|+-... ....+..+.+.|++||++++...
T Consensus 256 vid~~g------~~~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 256 ALECTG------VESSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp EEECSC------CHHHHHHHHHHSCTTCEEEECCC
T ss_pred EEECCC------ChHHHHHHHHHhcCCCEEEEEcc
Confidence 986432 23467889999999999988754
No 315
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.25 E-value=0.0053 Score=56.30 Aligned_cols=99 Identities=18% Similarity=0.288 Sum_probs=67.4
Q ss_pred CCCCEEEEEcCcc-chHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCC----C-CCCCCCCccEEEec
Q 019479 112 DRNMRVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAE----D-LPFPTDYADRYVSA 185 (340)
Q Consensus 112 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~----~-~~~~~~~fD~v~~~ 185 (340)
+++.+||-+|+|. |..+..+++..+..+|+++|.+++..+.+++.-...-+.+...|+. + .....+.+|+|+-.
T Consensus 181 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~ 260 (370)
T 4ej6_A 181 KAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIEC 260 (370)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEEC
Confidence 5789999999975 8888899988633499999999999999887532110110011110 0 00233479999864
Q ss_pred CcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 186 GSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 186 ~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
.. ....++.+.+.|++||++++...
T Consensus 261 ~G------~~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 261 AG------VAETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp SC------CHHHHHHHHHHEEEEEEEEECSC
T ss_pred CC------CHHHHHHHHHHhccCCEEEEEec
Confidence 32 23578899999999999988754
No 316
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.17 E-value=0.0031 Score=57.02 Aligned_cols=96 Identities=16% Similarity=0.193 Sum_probs=67.3
Q ss_pred CCCCEEEEEcCcc-chHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC----CCCCCccEEEecC
Q 019479 112 DRNMRVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP----FPTDYADRYVSAG 186 (340)
Q Consensus 112 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~----~~~~~fD~v~~~~ 186 (340)
.++.+||-+|+|. |..+..+++.. +.+|+++|.+++..+.+++... . .++..+-.++. ...+.+|+|+-..
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa-~--~~i~~~~~~~~~~~~~~~g~~d~vid~~ 240 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARRLGA-E--VAVNARDTDPAAWLQKEIGGAHGVLVTA 240 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTC-S--EEEETTTSCHHHHHHHHHSSEEEEEESS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHcCC-C--EEEeCCCcCHHHHHHHhCCCCCEEEEeC
Confidence 5789999999975 89999999986 6799999999999999987532 1 11211111110 0113689888643
Q ss_pred cccccCCHHHHHHHHHHhcccCcEEEEEccC
Q 019479 187 SIEYWPDPQRGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 187 ~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
. ....++.+.+.|++||++++....
T Consensus 241 g------~~~~~~~~~~~l~~~G~iv~~G~~ 265 (340)
T 3s2e_A 241 V------SPKAFSQAIGMVRRGGTIALNGLP 265 (340)
T ss_dssp C------CHHHHHHHHHHEEEEEEEEECSCC
T ss_pred C------CHHHHHHHHHHhccCCEEEEeCCC
Confidence 2 235788999999999999887543
No 317
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.11 E-value=0.0053 Score=55.93 Aligned_cols=95 Identities=19% Similarity=0.296 Sum_probs=66.1
Q ss_pred CCCCEEEEEcCcc-chHHHHHHHhCCCc-eEEEEeCCHHHHHHHHHhCCCCCcEEEEcC---CCC----C-CCCCCCccE
Q 019479 112 DRNMRVVDVGGGT-GFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEPLKECTIIEGD---AED----L-PFPTDYADR 181 (340)
Q Consensus 112 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d---~~~----~-~~~~~~fD~ 181 (340)
.++.+||-+|+|. |..+..+++.. +. +|+++|.+++..+.+++... . .++..+ ..+ + ......+|+
T Consensus 170 ~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa-~--~vi~~~~~~~~~~~~~i~~~~~~g~D~ 245 (356)
T 1pl8_A 170 TLGHKVLVCGAGPIGMVTLLVAKAM-GAAQVVVTDLSATRLSKAKEIGA-D--LVLQISKESPQEIARKVEGQLGCKPEV 245 (356)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTTC-S--EEEECSSCCHHHHHHHHHHHHTSCCSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCC-C--EEEcCcccccchHHHHHHHHhCCCCCE
Confidence 5789999999985 88888998886 55 99999999999999886432 2 122211 000 0 011146999
Q ss_pred EEecCcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 182 YVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 182 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
|+-... ....+..+.+.|++||++++...
T Consensus 246 vid~~g------~~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 246 TIECTG------AEASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp EEECSC------CHHHHHHHHHHSCTTCEEEECSC
T ss_pred EEECCC------ChHHHHHHHHHhcCCCEEEEEec
Confidence 986432 23467888999999999988754
No 318
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.95 E-value=0.02 Score=51.81 Aligned_cols=92 Identities=16% Similarity=0.230 Sum_probs=67.0
Q ss_pred CCCCEEEEEcCcc-chHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCcccc
Q 019479 112 DRNMRVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEY 190 (340)
Q Consensus 112 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 190 (340)
+++.+||-+|+|. |..+..+++.. +.+|+++|.+++..+.+++.-. .. ++ .+.+.+ . ..+|+|+-...-.
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa-~~--v~-~~~~~~--~-~~~D~vid~~g~~- 245 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALSMGV-KH--FY-TDPKQC--K-EELDFIISTIPTH- 245 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHHTTC-SE--EE-SSGGGC--C-SCEEEEEECCCSC-
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhcCC-Ce--ec-CCHHHH--h-cCCCEEEECCCcH-
Confidence 5789999999975 88888888886 6799999999999999987422 21 22 333322 2 2699998643322
Q ss_pred cCCHHHHHHHHHHhcccCcEEEEEccC
Q 019479 191 WPDPQRGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 191 ~~d~~~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
..+..+.+.|+++|++++....
T Consensus 246 -----~~~~~~~~~l~~~G~iv~~G~~ 267 (348)
T 3two_A 246 -----YDLKDYLKLLTYNGDLALVGLP 267 (348)
T ss_dssp -----CCHHHHHTTEEEEEEEEECCCC
T ss_pred -----HHHHHHHHHHhcCCEEEEECCC
Confidence 2467888999999999987543
No 319
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.94 E-value=0.013 Score=53.20 Aligned_cols=95 Identities=19% Similarity=0.288 Sum_probs=65.8
Q ss_pred CCCCEEEEEcCcc-chHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcC-CCCCC------CC---CCCcc
Q 019479 112 DRNMRVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGD-AEDLP------FP---TDYAD 180 (340)
Q Consensus 112 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d-~~~~~------~~---~~~fD 180 (340)
.++.+||-+|+|. |..+..+++.. +.+|+++|.+++..+.+++... + .++..+ ..+.. .. ...+|
T Consensus 167 ~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa-~--~~~~~~~~~~~~~~i~~~~~~~~g~g~D 242 (352)
T 1e3j_A 167 QLGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNCGA-D--VTLVVDPAKEEESSIIERIRSAIGDLPN 242 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTC-S--EEEECCTTTSCHHHHHHHHHHHSSSCCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHhCC-C--EEEcCcccccHHHHHHHHhccccCCCCC
Confidence 5789999999874 78888888875 6779999999999999886432 2 122111 01110 11 24699
Q ss_pred EEEecCcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 181 RYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 181 ~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
+|+-... ....++.+.+.|+++|++++...
T Consensus 243 ~vid~~g------~~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 243 VTIDCSG------NEKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp EEEECSC------CHHHHHHHHHHSCTTCEEEECSC
T ss_pred EEEECCC------CHHHHHHHHHHHhcCCEEEEEec
Confidence 9986432 13467888999999999988754
No 320
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.91 E-value=0.0053 Score=50.73 Aligned_cols=92 Identities=16% Similarity=0.224 Sum_probs=62.6
Q ss_pred CCCCEEEEEcC--ccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC--------CCCCCccE
Q 019479 112 DRNMRVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP--------FPTDYADR 181 (340)
Q Consensus 112 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~--------~~~~~fD~ 181 (340)
.++++||.+|+ |.|..+..++... +.+|+++|.+++..+.+++... ... .|..+.. .....+|+
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~~g~----~~~-~d~~~~~~~~~~~~~~~~~~~D~ 110 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGSDAKREMLSRLGV----EYV-GDSRSVDFADEILELTDGYGVDV 110 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHTTCC----SEE-EETTCSTHHHHHHHHTTTCCEEE
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCC----CEE-eeCCcHHHHHHHHHHhCCCCCeE
Confidence 47899999994 5677777776664 6799999999988887764311 111 1222111 11235999
Q ss_pred EEecCcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 182 YVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 182 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
++.+.. ...++.+.+.|+|||++++...
T Consensus 111 vi~~~g-------~~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 111 VLNSLA-------GEAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp EEECCC-------THHHHHHHHTEEEEEEEEECSC
T ss_pred EEECCc-------hHHHHHHHHHhccCCEEEEEcC
Confidence 986542 1467889999999999988753
No 321
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=95.89 E-value=0.26 Score=44.12 Aligned_cols=126 Identities=14% Similarity=0.001 Sum_probs=77.5
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCC-CCCCccEEEecCccccc
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPF-PTDYADRYVSAGSIEYW 191 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~-~~~~fD~v~~~~~l~~~ 191 (340)
.+.+|+|+.||.|.++..+... +...+.++|+++.+++..+.+..... ++|+.++.. .-..+|+|+...-...+
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~a-G~~~v~~~e~d~~a~~t~~~N~~~~~----~~Di~~~~~~~~~~~D~l~~gpPCQ~f 84 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESC-GAECVYSNEWDKYAQEVYEMNFGEKP----EGDITQVNEKTIPDHDILCAGFPCQAF 84 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHT-TCEEEEEECCCHHHHHHHHHHHSCCC----BSCGGGSCGGGSCCCSEEEEECCCTTT
T ss_pred CCCcEEEECCCcCHHHHHHHHC-CCeEEEEEeCCHHHHHHHHHHcCCCC----cCCHHHcCHhhCCCCCEEEECCCCCCc
Confidence 3579999999999999998876 23457789999999999988754221 677766431 12358999986433332
Q ss_pred ---------CCHH-HH---HHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEE
Q 019479 192 ---------PDPQ-RG---IKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVK 253 (340)
Q Consensus 192 ---------~d~~-~~---l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~ 253 (340)
.|.. .+ +-++.+.++|. +++.+.+..-..... -...+.+.+.|++.||.+..
T Consensus 85 S~ag~~~g~~d~r~~L~~~~~r~i~~~~P~--~~~~ENV~gl~~~~~--------~~~~~~i~~~l~~~GY~v~~ 149 (327)
T 2c7p_A 85 SISGKQKGFEDSRGTLFFDIARIVREKKPK--VVFMENVKNFASHDN--------GNTLEVVKNTMNELDYSFHA 149 (327)
T ss_dssp CTTSCCCGGGSTTSCHHHHHHHHHHHHCCS--EEEEEEEGGGGTGGG--------GHHHHHHHHHHHHTTBCCEE
T ss_pred chhcccCCCcchhhHHHHHHHHHHHhccCc--EEEEeCcHHHHhccc--------cHHHHHHHHHHHhCCCEEEE
Confidence 2332 12 23344456774 444443322110000 01246788889999998643
No 322
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.88 E-value=0.026 Score=56.11 Aligned_cols=124 Identities=19% Similarity=0.252 Sum_probs=80.8
Q ss_pred CCCEEEEEcCccchHHHHHHHhC-------CC-----ceEEEEeC---CHHHHHHHHHh--------------C------
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHV-------DA-----KNVTILDQ---SPHQLAKAKQK--------------E------ 157 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~-------~~-----~~v~g~D~---s~~~~~~a~~~--------------~------ 157 (340)
+.-+|+|+|.|+|.....+.+.+ |. .+++.+|. +.+.+..+-+. .
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 45699999999999887776643 11 57899998 55555443211 0
Q ss_pred ------CCC--CcEEEEcCCCC-CC-CC---CCCccEEEecCcccccCCH----HHHHHHHHHhcccCcEEEEEccCCCc
Q 019479 158 ------PLK--ECTIIEGDAED-LP-FP---TDYADRYVSAGSIEYWPDP----QRGIKEAYRVLKIGGKACVIGPVYPT 220 (340)
Q Consensus 158 ------~~~--~i~~~~~d~~~-~~-~~---~~~fD~v~~~~~l~~~~d~----~~~l~~~~~~LkpgG~l~i~~~~~~~ 220 (340)
... .+++..+|+.+ ++ +. ...+|++++...-- -.++ ..++..+.++++|||.+....
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p-~~np~~w~~~~~~~l~~~~~~g~~~~t~~----- 211 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAP-AKNPDMWNEQLFNAMARMTRPGGTFSTFT----- 211 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC---CCTTCSHHHHHHHHHHEEEEEEEEESC-----
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCC-CCChhhhhHHHHHHHHHHhCCCCEEEecc-----
Confidence 011 35567788843 32 11 46799999854221 1122 478999999999999875321
Q ss_pred hhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEe
Q 019479 221 FWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRI 257 (340)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~ 257 (340)
....+++.|.++||.+......
T Consensus 212 ---------------~~~~vr~~l~~aGf~~~~~~~~ 233 (689)
T 3pvc_A 212 ---------------AAGFVRRGLQQAGFNVTKVKGF 233 (689)
T ss_dssp ---------------CCHHHHHHHHHTTCEEEEEECS
T ss_pred ---------------CcHHHHHHHHhCCeEEEeccCC
Confidence 2346778899999998776644
No 323
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.77 E-value=0.0052 Score=55.88 Aligned_cols=96 Identities=19% Similarity=0.190 Sum_probs=66.2
Q ss_pred CCCCEEEEEcCcc-chHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCC-----C-CCCCCccEEEe
Q 019479 112 DRNMRVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDL-----P-FPTDYADRYVS 184 (340)
Q Consensus 112 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~-----~-~~~~~fD~v~~ 184 (340)
+++.+||-+|+|. |..+..+++..+..+|+++|.+++..+.+++.-.. .++..+-.++ . .....+|+|+-
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~---~vi~~~~~~~~~~v~~~t~g~g~D~v~d 241 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGAT---DIINYKNGDIVEQILKATDGKGVDKVVI 241 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCC---EEECGGGSCHHHHHHHHTTTCCEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCc---eEEcCCCcCHHHHHHHHcCCCCCCEEEE
Confidence 5789999999975 88888888886333899999999999999876331 1111111110 0 12336999986
Q ss_pred cCcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 185 AGSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 185 ~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
...- ...++.+.+.|+|||++++...
T Consensus 242 ~~g~------~~~~~~~~~~l~~~G~~v~~G~ 267 (352)
T 3fpc_A 242 AGGD------VHTFAQAVKMIKPGSDIGNVNY 267 (352)
T ss_dssp CSSC------TTHHHHHHHHEEEEEEEEECCC
T ss_pred CCCC------hHHHHHHHHHHhcCCEEEEecc
Confidence 4322 2467889999999999988754
No 324
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=95.73 E-value=0.0058 Score=55.34 Aligned_cols=97 Identities=22% Similarity=0.266 Sum_probs=68.9
Q ss_pred CCCCCEEEEEcCcc-chHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC-----C-CCCCccEEE
Q 019479 111 FDRNMRVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP-----F-PTDYADRYV 183 (340)
Q Consensus 111 ~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~-----~-~~~~fD~v~ 183 (340)
..++.+||-+|+|. |..+..+++...+.+|+++|.+++..+.+++.-.. .++..+- ++. . ....+|+|+
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~---~~i~~~~-~~~~~v~~~t~g~g~d~v~ 244 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGAD---AAVKSGA-GAADAIRELTGGQGATAVF 244 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCS---EEEECST-THHHHHHHHHGGGCEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCC---EEEcCCC-cHHHHHHHHhCCCCCeEEE
Confidence 35789999999975 88889999887678999999999999999875321 1221111 110 1 123699988
Q ss_pred ecCcccccCCHHHHHHHHHHhcccCcEEEEEccC
Q 019479 184 SAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 184 ~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
-.-. ....++.+.+.|++||++++....
T Consensus 245 d~~G------~~~~~~~~~~~l~~~G~iv~~G~~ 272 (345)
T 3jv7_A 245 DFVG------AQSTIDTAQQVVAVDGHISVVGIH 272 (345)
T ss_dssp ESSC------CHHHHHHHHHHEEEEEEEEECSCC
T ss_pred ECCC------CHHHHHHHHHHHhcCCEEEEECCC
Confidence 6332 234788999999999999887643
No 325
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=95.70 E-value=0.026 Score=56.02 Aligned_cols=124 Identities=21% Similarity=0.231 Sum_probs=80.8
Q ss_pred CCCEEEEEcCccchHHHHHHHhC-------C---C--ceEEEEeC---CHHHHHHHHHh--------------CC-----
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHV-------D---A--KNVTILDQ---SPHQLAKAKQK--------------EP----- 158 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~-------~---~--~~v~g~D~---s~~~~~~a~~~--------------~~----- 158 (340)
+.-+|||+|-|+|.+.....+.+ | . .+++++|. +++.+..+-+. ..
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 44699999999999877765542 1 1 46899998 77777644321 10
Q ss_pred -------C--CCcEEEEcCCCC-CC-CC---CCCccEEEecCcccccCCH----HHHHHHHHHhcccCcEEEEEccCCCc
Q 019479 159 -------L--KECTIIEGDAED-LP-FP---TDYADRYVSAGSIEYWPDP----QRGIKEAYRVLKIGGKACVIGPVYPT 220 (340)
Q Consensus 159 -------~--~~i~~~~~d~~~-~~-~~---~~~fD~v~~~~~l~~~~d~----~~~l~~~~~~LkpgG~l~i~~~~~~~ 220 (340)
. -.+++..+|+.+ ++ +. ...||+++... +..-.++ ..+++.++++++|||.+....
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~-f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~----- 219 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDG-FAPAKNPDMWTQNLFNAMARLARPGGTLATFT----- 219 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECC-SCGGGCGGGSCHHHHHHHHHHEEEEEEEEESC-----
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECC-CCCcCChhhhhHHHHHHHHHHhCCCCEEEecc-----
Confidence 0 113456677743 22 11 46799999744 2222233 378999999999999875322
Q ss_pred hhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEe
Q 019479 221 FWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRI 257 (340)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~ 257 (340)
....+++.|.++||.+......
T Consensus 220 ---------------~~~~vr~~L~~aGf~v~~~~~~ 241 (676)
T 3ps9_A 220 ---------------SAGFVRRGLQDAGFTMQKRKGF 241 (676)
T ss_dssp ---------------CCHHHHHHHHHHTCEEEEEECS
T ss_pred ---------------CcHHHHHHHHhCCeEEEecccc
Confidence 2246678899999998776544
No 326
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.68 E-value=0.16 Score=45.64 Aligned_cols=130 Identities=13% Similarity=0.138 Sum_probs=83.0
Q ss_pred CEEEEEcCccchHHHHHHHhCCC---ceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC---CCCCCccEEEecCcc
Q 019479 115 MRVVDVGGGTGFTTLGIVKHVDA---KNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP---FPTDYADRYVSAGSI 188 (340)
Q Consensus 115 ~~vLDiGcG~G~~~~~l~~~~~~---~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~---~~~~~fD~v~~~~~l 188 (340)
.+++|+-||.|.+...+.+. + ..|.++|+++.+++.-+.+.. +..++.+|+.++. ++...+|+++...-.
T Consensus 4 ~~~idLFaG~GG~~~G~~~a--G~~~~~v~a~e~d~~a~~ty~~N~~--~~~~~~~DI~~~~~~~~~~~~~D~l~ggpPC 79 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKES--GLDGEIVAAVDINTVANSVYKHNFP--ETNLLNRNIQQLTPQVIKKWNVDTILMSPPC 79 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHH--TCSEEEEEEECCCHHHHHHHHHHCT--TSCEECCCGGGCCHHHHHHTTCCEEEECCCC
T ss_pred CEEEEECcCccHHHHHHHHc--CCCceEEEEEeCCHHHHHHHHHhCC--CCceeccccccCCHHHhccCCCCEEEecCCC
Confidence 58999999999999998876 4 357799999999999888764 3456778887654 222358999975444
Q ss_pred ccc---------CCHH-HHHHHHHHhcccC--cEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEE
Q 019479 189 EYW---------PDPQ-RGIKEAYRVLKIG--GKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKR 256 (340)
Q Consensus 189 ~~~---------~d~~-~~l~~~~~~Lkpg--G~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~ 256 (340)
..+ .|.. ..+.++.++++.- -.+++.+.+..-.. . .+.+.+.+.|++.||.+... .
T Consensus 80 Q~fS~ag~~~~~~d~r~~L~~~~~r~i~~~~~P~~~vlENV~gl~~-~----------~~~~~i~~~l~~~GY~v~~~-v 147 (333)
T 4h0n_A 80 QPFTRNGKYLDDNDPRTNSFLYLIGILDQLDNVDYILMENVKGFEN-S----------TVRNLFIDKLKECNFIYQEF-L 147 (333)
T ss_dssp CCSEETTEECCTTCTTSCCHHHHHHHGGGCTTCCEEEEEECTTGGG-S----------HHHHHHHHHHHHTTEEEEEE-E
T ss_pred cchhhhhhccCCcCcccccHHHHHHHHHHhcCCCEEEEecchhhhh-h----------hHHHHHHHHHHhCCCeEEEE-E
Confidence 332 2332 2344444444321 24555555443211 0 02467888999999987544 4
Q ss_pred eCCc
Q 019479 257 IGPK 260 (340)
Q Consensus 257 ~~~~ 260 (340)
+...
T Consensus 148 l~a~ 151 (333)
T 4h0n_A 148 LCPS 151 (333)
T ss_dssp ECTT
T ss_pred ecHH
Confidence 4433
No 327
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=95.66 E-value=0.04 Score=49.71 Aligned_cols=99 Identities=17% Similarity=0.094 Sum_probs=65.4
Q ss_pred CCCCEEEEEcCcc-chHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCC-C-C-CCCCCccEEEecCc
Q 019479 112 DRNMRVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAED-L-P-FPTDYADRYVSAGS 187 (340)
Q Consensus 112 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~-~-~-~~~~~fD~v~~~~~ 187 (340)
+++.+||-+|+|. |..+..+++...+.+|+++|.+++-.+.+++.....-+.....|..+ . . .....+|.++....
T Consensus 162 ~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~~~~ 241 (348)
T 4eez_A 162 KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAIVCAV 241 (348)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEECCS
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEEEecc
Confidence 5789999999986 45666677766688999999999998888875432212222222211 0 0 12234676665322
Q ss_pred ccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 188 IEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 188 l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
....+....+.|+++|++++...
T Consensus 242 ------~~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 242 ------ARIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp ------CHHHHHHHHHTEEEEEEEEECCC
T ss_pred ------CcchhheeheeecCCceEEEEec
Confidence 23578889999999999988754
No 328
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.59 E-value=0.014 Score=53.48 Aligned_cols=94 Identities=16% Similarity=0.231 Sum_probs=64.8
Q ss_pred CCCCEEEEEcCcc-chHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCC-C-CCCCCCccEEEecCcc
Q 019479 112 DRNMRVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAED-L-PFPTDYADRYVSAGSI 188 (340)
Q Consensus 112 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~-~-~~~~~~fD~v~~~~~l 188 (340)
+++.+||-+|+|. |..+..+++.. +.+|+++|.+++..+.+++.-. . .++..+-.+ . ... +.+|+|+-....
T Consensus 193 ~~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~lGa-~--~vi~~~~~~~~~~~~-~g~Dvvid~~g~ 267 (369)
T 1uuf_A 193 GPGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKALGA-D--EVVNSRNADEMAAHL-KSFDFILNTVAA 267 (369)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHTC-S--EEEETTCHHHHHTTT-TCEEEEEECCSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCC-c--EEeccccHHHHHHhh-cCCCEEEECCCC
Confidence 5789999999985 88888888875 6789999999999999886432 1 112111000 0 111 469999864432
Q ss_pred cccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 189 EYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 189 ~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
. ..++.+.+.|+++|++++...
T Consensus 268 ~------~~~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 268 P------HNLDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp C------CCHHHHHTTEEEEEEEEECCC
T ss_pred H------HHHHHHHHHhccCCEEEEecc
Confidence 1 236778899999999987654
No 329
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.57 E-value=0.28 Score=37.81 Aligned_cols=91 Identities=12% Similarity=0.094 Sum_probs=58.9
Q ss_pred CCEEEEEcCcc-chHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC----CCCCCccEEEecCcc
Q 019479 114 NMRVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP----FPTDYADRYVSAGSI 188 (340)
Q Consensus 114 ~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~----~~~~~fD~v~~~~~l 188 (340)
..+|+=+|||. |......+.. .+.+|+++|.+++.++.+++ .++.++.+|..+.. ..-..+|+|++.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~-~g~~v~vid~~~~~~~~~~~----~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~--- 78 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLA-SDIPLVVIETSRTRVDELRE----RGVRAVLGNAANEEIMQLAHLECAKWLILT--- 78 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH-TTCCEEEEESCHHHHHHHHH----TTCEEEESCTTSHHHHHHTTGGGCSEEEEC---
T ss_pred CCCEEEECcCHHHHHHHHHHHH-CCCCEEEEECCHHHHHHHHH----cCCCEEECCCCCHHHHHhcCcccCCEEEEE---
Confidence 45788999974 4433333333 27899999999999988875 45678889986522 122468988863
Q ss_pred cccCCHH--HHHHHHHHhcccCcEEEEE
Q 019479 189 EYWPDPQ--RGIKEAYRVLKIGGKACVI 214 (340)
Q Consensus 189 ~~~~d~~--~~l~~~~~~LkpgG~l~i~ 214 (340)
.++.. ..+-...+.+.|+.+++..
T Consensus 79 --~~~~~~n~~~~~~a~~~~~~~~iiar 104 (140)
T 3fwz_A 79 --IPNGYEAGEIVASARAKNPDIEIIAR 104 (140)
T ss_dssp --CSCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred --CCChHHHHHHHHHHHHHCCCCeEEEE
Confidence 33332 2234456667788876654
No 330
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.56 E-value=0.0053 Score=55.59 Aligned_cols=97 Identities=13% Similarity=0.058 Sum_probs=65.1
Q ss_pred CCCEEEEEcCcc-chHHHHHHHhC-CCceEEEEeCCHHHHHHHHHhCCCCCcEEEE-cCC-CCCCCCCCCccEEEecCcc
Q 019479 113 RNMRVVDVGGGT-GFTTLGIVKHV-DAKNVTILDQSPHQLAKAKQKEPLKECTIIE-GDA-EDLPFPTDYADRYVSAGSI 188 (340)
Q Consensus 113 ~~~~vLDiGcG~-G~~~~~l~~~~-~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~-~d~-~~~~~~~~~fD~v~~~~~l 188 (340)
++.+||-+|+|. |..+..+++.. |+.+|+++|.+++..+.+++.-...-+.... .|. .++. ....+|+|+-....
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~-~g~g~D~vid~~g~ 248 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLT-DGLGASIAIDLVGT 248 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHH-TTCCEEEEEESSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhh-cCCCccEEEECCCC
Confidence 688999999974 77888888874 3678999999999999988653211010000 111 1111 12369999864332
Q ss_pred cccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 189 EYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 189 ~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
...++.+.+.|++||++++...
T Consensus 249 ------~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 249 ------EETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp ------HHHHHHHHHHEEEEEEEEECCC
T ss_pred ------hHHHHHHHHHhhcCCEEEEeCC
Confidence 3467889999999999988753
No 331
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.50 E-value=0.013 Score=53.72 Aligned_cols=96 Identities=17% Similarity=0.170 Sum_probs=65.6
Q ss_pred CCCCEEEEEcCcc-chHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEc-CC-CCC-----CCCCCCccEEE
Q 019479 112 DRNMRVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEG-DA-EDL-----PFPTDYADRYV 183 (340)
Q Consensus 112 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~-d~-~~~-----~~~~~~fD~v~ 183 (340)
.++.+||-+|+|. |..+..+++..+..+|+++|.+++..+.+++.-. . .++.. +. .++ ....+.+|+|+
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-~--~vi~~~~~~~~~~~~i~~~t~gg~Dvvi 266 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGA-T--ECLNPKDYDKPIYEVICEKTNGGVDYAV 266 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTC-S--EEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC-c--EEEecccccchHHHHHHHHhCCCCCEEE
Confidence 5789999999874 7888888887633389999999999999986422 1 11111 10 111 01223699998
Q ss_pred ecCcccccCCHHHHHHHHHHhcccC-cEEEEEcc
Q 019479 184 SAGSIEYWPDPQRGIKEAYRVLKIG-GKACVIGP 216 (340)
Q Consensus 184 ~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~i~~~ 216 (340)
-...- ...++.+.+.|+++ |++++...
T Consensus 267 d~~g~------~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 267 ECAGR------IETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp ECSCC------HHHHHHHHHTBCTTTCEEEECCC
T ss_pred ECCCC------HHHHHHHHHHHhcCCCEEEEEcc
Confidence 54321 35678899999999 99987753
No 332
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.43 E-value=0.01 Score=54.53 Aligned_cols=96 Identities=15% Similarity=0.188 Sum_probs=66.2
Q ss_pred CCCCEEEEEcCc-cchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcC--CCCC-----CCCCCCccEEE
Q 019479 112 DRNMRVVDVGGG-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGD--AEDL-----PFPTDYADRYV 183 (340)
Q Consensus 112 ~~~~~vLDiGcG-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d--~~~~-----~~~~~~fD~v~ 183 (340)
+++.+||-+|+| .|..+..+++..+..+|+++|.+++.++.+++.-. . .++... -.++ ....+.+|+|+
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa-~--~vi~~~~~~~~~~~~i~~~~~gg~D~vi 268 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGV-N--EFVNPKDHDKPIQEVIVDLTDGGVDYSF 268 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTC-C--EEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC-c--EEEccccCchhHHHHHHHhcCCCCCEEE
Confidence 578999999997 48888888888633489999999999999886422 1 111111 0110 01234799998
Q ss_pred ecCcccccCCHHHHHHHHHHhcccC-cEEEEEcc
Q 019479 184 SAGSIEYWPDPQRGIKEAYRVLKIG-GKACVIGP 216 (340)
Q Consensus 184 ~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~i~~~ 216 (340)
-... ....++.+.+.|++| |++++...
T Consensus 269 d~~g------~~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 269 ECIG------NVSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp ECSC------CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred ECCC------CHHHHHHHHHHhhccCCEEEEEcc
Confidence 6432 235688999999997 99988764
No 333
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.34 E-value=0.068 Score=48.64 Aligned_cols=94 Identities=15% Similarity=0.194 Sum_probs=65.7
Q ss_pred CCCEEEEEc-C-ccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEc--CCCC--CCCCCCCccEEEecC
Q 019479 113 RNMRVVDVG-G-GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEG--DAED--LPFPTDYADRYVSAG 186 (340)
Q Consensus 113 ~~~~vLDiG-c-G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~--d~~~--~~~~~~~fD~v~~~~ 186 (340)
++.+||-+| + +.|..+..+++...+.+|+++|.+++..+.+++.-. . .++.. |+.+ .....+.+|+|+-..
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGa-d--~vi~~~~~~~~~v~~~~~~g~Dvvid~~ 247 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGA-H--HVIDHSKPLAAEVAALGLGAPAFVFSTT 247 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTC-S--EEECTTSCHHHHHHTTCSCCEEEEEECS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCC-C--EEEeCCCCHHHHHHHhcCCCceEEEECC
Confidence 678999998 4 468899999987557899999999999999986422 1 11111 1100 012335699988532
Q ss_pred cccccCCHHHHHHHHHHhcccCcEEEEEc
Q 019479 187 SIEYWPDPQRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 187 ~l~~~~d~~~~l~~~~~~LkpgG~l~i~~ 215 (340)
.....+..+.+.|+++|++++..
T Consensus 248 ------g~~~~~~~~~~~l~~~G~iv~~g 270 (363)
T 4dvj_A 248 ------HTDKHAAEIADLIAPQGRFCLID 270 (363)
T ss_dssp ------CHHHHHHHHHHHSCTTCEEEECS
T ss_pred ------CchhhHHHHHHHhcCCCEEEEEC
Confidence 23357889999999999998874
No 334
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.31 E-value=0.019 Score=52.49 Aligned_cols=95 Identities=16% Similarity=0.209 Sum_probs=65.5
Q ss_pred CCCCEEEEEcCcc-chHHHHHHHhCCCc-eEEEEeCCHHHHHHHHHhCCCCCcEEEE-cCC-CCC-----CCCCCCccEE
Q 019479 112 DRNMRVVDVGGGT-GFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEPLKECTIIE-GDA-EDL-----PFPTDYADRY 182 (340)
Q Consensus 112 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~i~~~~-~d~-~~~-----~~~~~~fD~v 182 (340)
.++.+||-+|+|. |..+..+++.. +. +|+++|.+++..+.+++... . .++. .+. .++ ....+.+|+|
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~lGa-~--~vi~~~~~~~~~~~~~~~~~~~g~D~v 266 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSA-GAKRIIAVDLNPDKFEKAKVFGA-T--DFVNPNDHSEPISQVLSKMTNGGVDFS 266 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHTTC-C--EEECGGGCSSCHHHHHHHHHTSCBSEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHhCC-c--eEEeccccchhHHHHHHHHhCCCCCEE
Confidence 5789999999874 78888888886 55 89999999999999886422 1 1111 110 111 0112369999
Q ss_pred EecCcccccCCHHHHHHHHHHhcccC-cEEEEEcc
Q 019479 183 VSAGSIEYWPDPQRGIKEAYRVLKIG-GKACVIGP 216 (340)
Q Consensus 183 ~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~i~~~ 216 (340)
+-.... ...++.+.+.|++| |++++...
T Consensus 267 id~~g~------~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 267 LECVGN------VGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp EECSCC------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred EECCCC------HHHHHHHHHHhhcCCcEEEEEcC
Confidence 854321 34678899999999 99988754
No 335
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.23 E-value=0.049 Score=49.55 Aligned_cols=95 Identities=23% Similarity=0.241 Sum_probs=67.0
Q ss_pred CCCCEEEEEcCcc-chHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC------CCCCCccEEEe
Q 019479 112 DRNMRVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP------FPTDYADRYVS 184 (340)
Q Consensus 112 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~------~~~~~fD~v~~ 184 (340)
+++.+||-+|+|. |..+..+++.. +.+|+++|.+++..+.+++... . .++..+..++. .....+|+|+-
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa-~--~vi~~~~~~~~~~v~~~~~g~g~D~vid 263 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFALGA-D--HGINRLEEDWVERVYALTGDRGADHILE 263 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTC-S--EEEETTTSCHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHHcCC-C--EEEcCCcccHHHHHHHHhCCCCceEEEE
Confidence 5789999999875 88888888875 6799999999999999887532 1 12222211110 12336999986
Q ss_pred cCcccccCCHHHHHHHHHHhcccCcEEEEEccC
Q 019479 185 AGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 185 ~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
...- ..+..+.+.|++||++++....
T Consensus 264 ~~g~-------~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 264 IAGG-------AGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp ETTS-------SCHHHHHHHEEEEEEEEEECCC
T ss_pred CCCh-------HHHHHHHHHhhcCCEEEEEecC
Confidence 5431 2467788999999999988643
No 336
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.23 E-value=0.033 Score=51.55 Aligned_cols=99 Identities=22% Similarity=0.273 Sum_probs=64.9
Q ss_pred CCCCCEEEEEcCcc-chHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCC-----C-CCCCCccEEE
Q 019479 111 FDRNMRVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDL-----P-FPTDYADRYV 183 (340)
Q Consensus 111 ~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~-----~-~~~~~fD~v~ 183 (340)
..++.+||-+|+|. |..+..+++..+..+|+++|.+++..+.+++.-.. .++..+-.++ . .....+|+|+
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~---~vi~~~~~~~~~~i~~~t~g~g~D~vi 287 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGAD---HVIDPTKENFVEAVLDYTNGLGAKLFL 287 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCS---EEECTTTSCHHHHHHHHTTTCCCSEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCC---EEEcCCCCCHHHHHHHHhCCCCCCEEE
Confidence 35789999999974 78888888886334999999999999999875321 1221111111 0 1233699998
Q ss_pred ecCcccccCCHHHHHHHHHHhc----ccCcEEEEEccC
Q 019479 184 SAGSIEYWPDPQRGIKEAYRVL----KIGGKACVIGPV 217 (340)
Q Consensus 184 ~~~~l~~~~d~~~~l~~~~~~L----kpgG~l~i~~~~ 217 (340)
-.. ......+..+.+.| ++||++++....
T Consensus 288 d~~-----g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~ 320 (404)
T 3ip1_A 288 EAT-----GVPQLVWPQIEEVIWRARGINATVAIVARA 320 (404)
T ss_dssp ECS-----SCHHHHHHHHHHHHHHCSCCCCEEEECSCC
T ss_pred ECC-----CCcHHHHHHHHHHHHhccCCCcEEEEeCCC
Confidence 532 23333455555555 999999987643
No 337
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.22 E-value=0.025 Score=51.70 Aligned_cols=95 Identities=15% Similarity=0.157 Sum_probs=65.3
Q ss_pred CCCCEEEEEcCcc-chHHHHHHHhCCCc-eEEEEeCCHHHHHHHHHhCCCCCcEEEEc-CC-CCC-----CCCCCCccEE
Q 019479 112 DRNMRVVDVGGGT-GFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEPLKECTIIEG-DA-EDL-----PFPTDYADRY 182 (340)
Q Consensus 112 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~i~~~~~-d~-~~~-----~~~~~~fD~v 182 (340)
+++.+||-+|+|. |..+..+++.. +. +|+++|.+++..+.+++.-. . .++.. +. .++ ....+.+|+|
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~lGa-~--~vi~~~~~~~~~~~~~~~~~~~g~D~v 265 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAA-GAARIIGVDINKDKFAKAKEVGA-T--ECVNPQDYKKPIQEVLTEMSNGGVDFS 265 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHTTC-S--EEECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCC-c--eEecccccchhHHHHHHHHhCCCCcEE
Confidence 5789999999875 78888888886 55 89999999999999876422 1 11111 10 110 0122369999
Q ss_pred EecCcccccCCHHHHHHHHHHhcccC-cEEEEEcc
Q 019479 183 VSAGSIEYWPDPQRGIKEAYRVLKIG-GKACVIGP 216 (340)
Q Consensus 183 ~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~i~~~ 216 (340)
+-...- ...++.+.+.|+++ |++++...
T Consensus 266 id~~g~------~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 266 FEVIGR------LDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp EECSCC------HHHHHHHHHHBCTTTCEEEECSC
T ss_pred EECCCC------HHHHHHHHHHhhcCCcEEEEecc
Confidence 854321 34678899999999 99988753
No 338
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.18 E-value=0.017 Score=51.83 Aligned_cols=92 Identities=17% Similarity=0.050 Sum_probs=63.8
Q ss_pred CCCCEEEEEcC--ccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCC-CC-------CCCCCccE
Q 019479 112 DRNMRVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAED-LP-------FPTDYADR 181 (340)
Q Consensus 112 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~-~~-------~~~~~fD~ 181 (340)
.++++||..|+ |.|..+..+++.. +.+|+++|.+++..+.+++. ... .. .|..+ .. ...+.+|+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~~-g~~--~~--~d~~~~~~~~~~~~~~~~~~~d~ 217 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLKQI-GFD--AA--FNYKTVNSLEEALKKASPDGYDC 217 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT-TCS--EE--EETTSCSCHHHHHHHHCTTCEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhc-CCc--EE--EecCCHHHHHHHHHHHhCCCCeE
Confidence 57899999998 5677777777764 67999999999988888543 211 11 13221 11 11246999
Q ss_pred EEecCcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 182 YVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 182 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
++.+... ..++.+.+.|++||++++...
T Consensus 218 vi~~~g~-------~~~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 218 YFDNVGG-------EFLNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp EEESSCH-------HHHHHHHTTEEEEEEEEECCC
T ss_pred EEECCCh-------HHHHHHHHHHhcCCEEEEEec
Confidence 9875442 357888999999999987653
No 339
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.16 E-value=0.024 Score=52.63 Aligned_cols=58 Identities=16% Similarity=0.231 Sum_probs=45.7
Q ss_pred CCCCEEEEEcCccchHHHHHH-HhCCC-ceEEEEeCCHHHHHHHHHhCC------C-CCcEEEEcCC
Q 019479 112 DRNMRVVDVGGGTGFTTLGIV-KHVDA-KNVTILDQSPHQLAKAKQKEP------L-KECTIIEGDA 169 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~-~~~~~-~~v~g~D~s~~~~~~a~~~~~------~-~~i~~~~~d~ 169 (340)
+++..|+|||++.|.++..++ +..+. .+|+++|++|...+..+++.. . ++++++..-+
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al 291 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGA 291 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEE
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEE
Confidence 578999999999999999988 55544 799999999999988887632 2 5666655444
No 340
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.15 E-value=0.024 Score=51.82 Aligned_cols=95 Identities=17% Similarity=0.186 Sum_probs=65.6
Q ss_pred CCCCEEEEEcCcc-chHHHHHHHhCCCc-eEEEEeCCHHHHHHHHHhCCCCCcEEEE-cCC-CCC-----CCCCCCccEE
Q 019479 112 DRNMRVVDVGGGT-GFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEPLKECTIIE-GDA-EDL-----PFPTDYADRY 182 (340)
Q Consensus 112 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~i~~~~-~d~-~~~-----~~~~~~fD~v 182 (340)
+++.+||-+|+|. |..+..+++.. +. +|+++|.+++..+.+++.-. . .++. .+. .++ ....+.+|+|
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~-Ga~~Vi~~~~~~~~~~~~~~lGa-~--~vi~~~~~~~~~~~~v~~~~~~g~D~v 264 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVA-GASRIIGVDINKDKFARAKEFGA-T--ECINPQDFSKPIQEVLIEMTDGGVDYS 264 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHHHHTC-S--EEECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCC-c--eEeccccccccHHHHHHHHhCCCCCEE
Confidence 5789999999874 78888888876 55 89999999999999986532 1 1111 110 110 0112369999
Q ss_pred EecCcccccCCHHHHHHHHHHhcccC-cEEEEEcc
Q 019479 183 VSAGSIEYWPDPQRGIKEAYRVLKIG-GKACVIGP 216 (340)
Q Consensus 183 ~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~i~~~ 216 (340)
+-.... ...++.+.+.|+++ |++++...
T Consensus 265 id~~g~------~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 265 FECIGN------VKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp EECSCC------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred EECCCc------HHHHHHHHHhhccCCcEEEEEec
Confidence 854321 34678899999999 99988753
No 341
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.14 E-value=0.023 Score=52.02 Aligned_cols=95 Identities=16% Similarity=0.240 Sum_probs=65.4
Q ss_pred CCCCEEEEEcCcc-chHHHHHHHhCCCc-eEEEEeCCHHHHHHHHHhCCCCCcEEEE-cCC-CCC-----CCCCCCccEE
Q 019479 112 DRNMRVVDVGGGT-GFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEPLKECTIIE-GDA-EDL-----PFPTDYADRY 182 (340)
Q Consensus 112 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~i~~~~-~d~-~~~-----~~~~~~fD~v 182 (340)
.++.+||-+|+|. |..+..+++.. +. +|+++|.+++..+.+++.-. . .++. .+. .++ ....+.+|+|
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa-~--~vi~~~~~~~~~~~~v~~~~~~g~Dvv 269 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIA-GASRIIAIDINGEKFPKAKALGA-T--DCLNPRELDKPVQDVITELTAGGVDYS 269 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHTTC-S--EEECGGGCSSCHHHHHHHHHTSCBSEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCC-c--EEEccccccchHHHHHHHHhCCCccEE
Confidence 5789999999874 78888888886 55 89999999999999876422 1 1111 110 010 0112369999
Q ss_pred EecCcccccCCHHHHHHHHHHhcccC-cEEEEEcc
Q 019479 183 VSAGSIEYWPDPQRGIKEAYRVLKIG-GKACVIGP 216 (340)
Q Consensus 183 ~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~i~~~ 216 (340)
+-...- ...++.+.+.|++| |++++...
T Consensus 270 id~~G~------~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 270 LDCAGT------AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp EESSCC------HHHHHHHHHTBCTTTCEEEECCC
T ss_pred EECCCC------HHHHHHHHHHhhcCCCEEEEECC
Confidence 854321 35678899999999 99988754
No 342
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=95.05 E-value=0.099 Score=47.03 Aligned_cols=92 Identities=14% Similarity=0.091 Sum_probs=64.9
Q ss_pred CCCCEEEEEcC--ccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCC---CC-----CCCCCccE
Q 019479 112 DRNMRVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAED---LP-----FPTDYADR 181 (340)
Q Consensus 112 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~---~~-----~~~~~fD~ 181 (340)
.++++||-+|+ |.|..+..+++.. +.+|+++|.+++..+.+++..... ..+ |..+ +. ...+.+|+
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~~g~~--~~~--d~~~~~~~~~~~~~~~~~~~d~ 228 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKTKFGFD--DAF--NYKEESDLTAALKRCFPNGIDI 228 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTSCCS--EEE--ETTSCSCSHHHHHHHCTTCEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCc--eEE--ecCCHHHHHHHHHHHhCCCCcE
Confidence 57899999997 5788888888875 679999999999988887443321 111 2211 10 11246999
Q ss_pred EEecCcccccCCHHHHHHHHHHhcccCcEEEEEc
Q 019479 182 YVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 182 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~ 215 (340)
|+.+... ..++.+.+.|++||++++..
T Consensus 229 vi~~~g~-------~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 229 YFENVGG-------KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp EEESSCH-------HHHHHHHTTEEEEEEEEECC
T ss_pred EEECCCH-------HHHHHHHHHHhcCCEEEEEc
Confidence 9865431 36888999999999998764
No 343
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=94.92 E-value=0.038 Score=49.21 Aligned_cols=88 Identities=15% Similarity=0.104 Sum_probs=61.3
Q ss_pred CCCCEEEEEcCc-cchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCcccc
Q 019479 112 DRNMRVVDVGGG-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEY 190 (340)
Q Consensus 112 ~~~~~vLDiGcG-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 190 (340)
+++.+||-+|+| .|..+..+++.. +.+|+++| +++..+.+++.-. ..+..|.+++ .+.+|+|+-.-.-
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~-~~~~~~~~~~lGa----~~v~~d~~~v---~~g~Dvv~d~~g~-- 209 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNA-GYVVDLVS-ASLSQALAAKRGV----RHLYREPSQV---TQKYFAIFDAVNS-- 209 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEEC-SSCCHHHHHHHTE----EEEESSGGGC---CSCEEEEECC-----
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEE-ChhhHHHHHHcCC----CEEEcCHHHh---CCCccEEEECCCc--
Confidence 579999999996 488888898886 67999999 9999999886422 2222242222 5679999853221
Q ss_pred cCCHHHHHHHHHHhcccCcEEEEEc
Q 019479 191 WPDPQRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 191 ~~d~~~~l~~~~~~LkpgG~l~i~~ 215 (340)
..+..+.+.|+++|++++..
T Consensus 210 -----~~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 210 -----QNAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp ---------TTGGGEEEEEEEEEEC
T ss_pred -----hhHHHHHHHhcCCCEEEEEe
Confidence 12356789999999998874
No 344
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=94.85 E-value=0.088 Score=47.19 Aligned_cols=95 Identities=13% Similarity=0.057 Sum_probs=65.2
Q ss_pred CCCCEEEEEcC--ccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCC-----CCCCCCccEEEe
Q 019479 112 DRNMRVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDL-----PFPTDYADRYVS 184 (340)
Q Consensus 112 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~-----~~~~~~fD~v~~ 184 (340)
+++++||-+|+ |.|..+..+++.. +.+|+++|.+++..+.+.+..... ..+..+-.++ ....+.+|+|+-
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~d~vi~ 224 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFLVEELGFD--GAIDYKNEDLAAGLKRECPKGIDVFFD 224 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCCS--EEEETTTSCHHHHHHHHCTTCEEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCC--EEEECCCHHHHHHHHHhcCCCceEEEE
Confidence 57899999998 5688888888875 679999999999998884333221 1111111110 011346999986
Q ss_pred cCcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 185 AGSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 185 ~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
+..- ..+..+.+.|++||++++...
T Consensus 225 ~~g~-------~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 225 NVGG-------EILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp SSCH-------HHHHHHHTTEEEEEEEEECCC
T ss_pred CCCc-------chHHHHHHHHhhCCEEEEEee
Confidence 4431 368889999999999988653
No 345
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=94.81 E-value=0.078 Score=45.75 Aligned_cols=104 Identities=11% Similarity=0.045 Sum_probs=69.9
Q ss_pred CCCEEEEEcCccchHHHHHHHh-------CCCceEEEEe-----CCH----------------------HHHHHHH---H
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKH-------VDAKNVTILD-----QSP----------------------HQLAKAK---Q 155 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~-------~~~~~v~g~D-----~s~----------------------~~~~~a~---~ 155 (340)
-+..|+|+|+-.|..+..++.. .+..+++++| ..+ +.++... +
T Consensus 69 vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~ 148 (257)
T 3tos_A 69 VPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHE 148 (257)
T ss_dssp SCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHH
T ss_pred CCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHh
Confidence 3568999999999988886542 2457999999 221 1112111 1
Q ss_pred ---hCC--CCCcEEEEcCCCC-CC-----CCCCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccCC
Q 019479 156 ---KEP--LKECTIIEGDAED-LP-----FPTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVY 218 (340)
Q Consensus 156 ---~~~--~~~i~~~~~d~~~-~~-----~~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~ 218 (340)
+.. .++++++.+++.+ ++ .+..++|+|+.-.-. -......++.+...|+|||.+++-+...
T Consensus 149 ~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--Y~~t~~~le~~~p~l~~GGvIv~DD~~~ 220 (257)
T 3tos_A 149 CSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--YEPTKAVLEAIRPYLTKGSIVAFDELDN 220 (257)
T ss_dssp TTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--HHHHHHHHHHHGGGEEEEEEEEESSTTC
T ss_pred hhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--cchHHHHHHHHHHHhCCCcEEEEcCCCC
Confidence 122 3689999999965 33 245579999986532 1223467899999999999998877643
No 346
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=94.76 E-value=0.16 Score=45.53 Aligned_cols=94 Identities=18% Similarity=0.203 Sum_probs=65.6
Q ss_pred CCCCEEEEEcCc-cchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCC------CCCccEEEe
Q 019479 112 DRNMRVVDVGGG-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFP------TDYADRYVS 184 (340)
Q Consensus 112 ~~~~~vLDiGcG-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~------~~~fD~v~~ 184 (340)
.++.+||-+|+| .|..+..+++.. +.+|+++|.+++..+.+++... . .+ .|..+..+. .+.+|+|+-
T Consensus 163 ~~g~~VlV~GaG~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lGa-~--~~--~d~~~~~~~~~~~~~~~~~d~vid 236 (339)
T 1rjw_A 163 KPGEWVAIYGIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKELGA-D--LV--VNPLKEDAAKFMKEKVGGVHAAVV 236 (339)
T ss_dssp CTTCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTC-S--EE--ECTTTSCHHHHHHHHHSSEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHCCC-C--EE--ecCCCccHHHHHHHHhCCCCEEEE
Confidence 578999999986 578888888875 6799999999999998876321 1 11 233211100 046899986
Q ss_pred cCcccccCCHHHHHHHHHHhcccCcEEEEEccC
Q 019479 185 AGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 185 ~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
.... ...++.+.+.|+++|++++....
T Consensus 237 ~~g~------~~~~~~~~~~l~~~G~~v~~g~~ 263 (339)
T 1rjw_A 237 TAVS------KPAFQSAYNSIRRGGACVLVGLP 263 (339)
T ss_dssp SSCC------HHHHHHHHHHEEEEEEEEECCCC
T ss_pred CCCC------HHHHHHHHHHhhcCCEEEEeccc
Confidence 4331 24678889999999999887543
No 347
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=94.71 E-value=0.049 Score=48.62 Aligned_cols=91 Identities=13% Similarity=0.208 Sum_probs=63.4
Q ss_pred EEEEEcC--ccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCC-CCCCCCCccEEEecCcccccC
Q 019479 116 RVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAED-LPFPTDYADRYVSAGSIEYWP 192 (340)
Q Consensus 116 ~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~~ 192 (340)
+||-+|+ |.|..+..+++.. +.+|+++|.+++..+.+++.-.. . .+-..+... .....+.+|+|+-...
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~-~-vi~~~~~~~~~~~~~~~~d~v~d~~g----- 220 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL-GYQVAAVSGRESTHGYLKSLGAN-R-ILSRDEFAESRPLEKQLWAGAIDTVG----- 220 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTCS-E-EEEGGGSSCCCSSCCCCEEEEEESSC-----
T ss_pred eEEEECCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCC-E-EEecCCHHHHHhhcCCCccEEEECCC-----
Confidence 4999996 5788999999986 67999999999999999875321 1 111112111 1123456998875322
Q ss_pred CHHHHHHHHHHhcccCcEEEEEcc
Q 019479 193 DPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 193 d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
...+..+.+.|+++|++++...
T Consensus 221 --~~~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 221 --DKVLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp --HHHHHHHHHTEEEEEEEEECCC
T ss_pred --cHHHHHHHHHHhcCCEEEEEec
Confidence 1378999999999999988754
No 348
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=94.70 E-value=0.11 Score=47.01 Aligned_cols=89 Identities=15% Similarity=0.206 Sum_probs=61.3
Q ss_pred CEEEEEcCc-cchHH-HHHH-HhCCCce-EEEEeCCHH---HHHHHHHhCCCCCcEEEEcCCCCCCCC-----CCCccEE
Q 019479 115 MRVVDVGGG-TGFTT-LGIV-KHVDAKN-VTILDQSPH---QLAKAKQKEPLKECTIIEGDAEDLPFP-----TDYADRY 182 (340)
Q Consensus 115 ~~vLDiGcG-~G~~~-~~l~-~~~~~~~-v~g~D~s~~---~~~~a~~~~~~~~i~~~~~d~~~~~~~-----~~~fD~v 182 (340)
.+||-+|+| .|..+ ..++ +.. +.+ |+++|.+++ ..+.+++.- .+.+ |..+..+. .+.+|+|
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~~lG----a~~v--~~~~~~~~~i~~~~gg~Dvv 246 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIEELD----ATYV--DSRQTPVEDVPDVYEQMDFI 246 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHHHTT----CEEE--ETTTSCGGGHHHHSCCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHHHcC----Cccc--CCCccCHHHHHHhCCCCCEE
Confidence 899999985 47788 8888 765 555 999999988 888887532 2222 33221110 2368998
Q ss_pred EecCcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 183 VSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 183 ~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
+-... ....++.+.+.|+++|++++...
T Consensus 247 id~~g------~~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 247 YEATG------FPKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp EECSC------CHHHHHHHHHHEEEEEEEEECCC
T ss_pred EECCC------ChHHHHHHHHHHhcCCEEEEEeC
Confidence 85432 13467889999999999988754
No 349
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=94.69 E-value=0.043 Score=49.47 Aligned_cols=98 Identities=19% Similarity=0.273 Sum_probs=66.2
Q ss_pred CCCCEEEEEcCcc-chHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC------CCCCCccEEEe
Q 019479 112 DRNMRVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP------FPTDYADRYVS 184 (340)
Q Consensus 112 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~------~~~~~fD~v~~ 184 (340)
.++.+||-.|+|. |..+..+++......++++|.+++-.+.+++.-.. .++..+-.+.. .....+|+|+-
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~---~~i~~~~~~~~~~~~~~~~~~g~d~v~d 235 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAM---QTFNSSEMSAPQMQSVLRELRFNQLILE 235 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCS---EEEETTTSCHHHHHHHHGGGCSSEEEEE
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCe---EEEeCCCCCHHHHHHhhcccCCcccccc
Confidence 5789999999974 66778888886556789999999999999875321 12211111100 12245788775
Q ss_pred cCcccccCCHHHHHHHHHHhcccCcEEEEEccCC
Q 019479 185 AGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPVY 218 (340)
Q Consensus 185 ~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~~ 218 (340)
... ....++.+.+.|++||++++.....
T Consensus 236 ~~G------~~~~~~~~~~~l~~~G~~v~~g~~~ 263 (346)
T 4a2c_A 236 TAG------VPQTVELAVEIAGPHAQLALVGTLH 263 (346)
T ss_dssp CSC------SHHHHHHHHHHCCTTCEEEECCCCS
T ss_pred ccc------ccchhhhhhheecCCeEEEEEeccC
Confidence 322 2356788999999999998876443
No 350
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.50 E-value=0.018 Score=51.97 Aligned_cols=94 Identities=14% Similarity=0.046 Sum_probs=63.4
Q ss_pred CCCCEEEEEcCc--cchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC------CCCCCccEEE
Q 019479 112 DRNMRVVDVGGG--TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP------FPTDYADRYV 183 (340)
Q Consensus 112 ~~~~~vLDiGcG--~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~------~~~~~fD~v~ 183 (340)
+++.+||-+|+| .|..+..+++.. +.+|+++|.+++..+.+++.... ..+..+-.++. .....+|+|+
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lga~---~~~~~~~~~~~~~~~~~~~~~g~Dvvi 218 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQIL-NFRLIAVTRNNKHTEELLRLGAA---YVIDTSTAPLYETVMELTNGIGADAAI 218 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHHTCS---EEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhCCCc---EEEeCCcccHHHHHHHHhCCCCCcEEE
Confidence 578999999986 678888888875 67999999999999988875321 11211111110 1234699998
Q ss_pred ecCcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 184 SAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 184 ~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
-+..-. ...+..+.|++||++++...
T Consensus 219 d~~g~~-------~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 219 DSIGGP-------DGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp ESSCHH-------HHHHHHHTEEEEEEEEECCC
T ss_pred ECCCCh-------hHHHHHHHhcCCCEEEEEee
Confidence 643321 23445589999999988754
No 351
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=94.44 E-value=0.14 Score=46.13 Aligned_cols=96 Identities=19% Similarity=0.269 Sum_probs=64.8
Q ss_pred CCCCEEEEEcCc--cchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCC-----CCCC-CCccEEE
Q 019479 112 DRNMRVVDVGGG--TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDL-----PFPT-DYADRYV 183 (340)
Q Consensus 112 ~~~~~vLDiGcG--~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~-----~~~~-~~fD~v~ 183 (340)
.++.+||-+|+| .|..+..+++...+.+|+++|.+++..+.+++... . .++...-.+. .... +.+|+|+
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~-~--~~~~~~~~~~~~~~~~~~~~~~~d~vi 245 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGA-D--YVINASMQDPLAEIRRITESKGVDAVI 245 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTC-S--EEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC-C--EEecCCCccHHHHHHHHhcCCCceEEE
Confidence 578999999998 56677777777436799999999999888876421 1 1111111110 0112 4699998
Q ss_pred ecCcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 184 SAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 184 ~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
.+..- ...++.+.+.|+++|++++...
T Consensus 246 ~~~g~------~~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 246 DLNNS------EKTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp ESCCC------HHHHTTGGGGEEEEEEEEECCS
T ss_pred ECCCC------HHHHHHHHHHHhcCCEEEEECC
Confidence 65332 3467888999999999988653
No 352
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=94.39 E-value=0.14 Score=45.88 Aligned_cols=95 Identities=16% Similarity=0.157 Sum_probs=65.8
Q ss_pred CCCCCEEEEEcC--ccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC------CCCCCccEE
Q 019479 111 FDRNMRVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP------FPTDYADRY 182 (340)
Q Consensus 111 ~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~------~~~~~fD~v 182 (340)
.+++.+||-+|+ |.|..+..+++.. +.+|+++|.+++..+.+++... . .++..+-.++. .....+|+|
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga-~--~~~~~~~~~~~~~~~~~~~~~g~D~v 221 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKEYGA-E--YLINASKEDILRQVLKFTNGKGVDAS 221 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTC-S--EEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCC-c--EEEeCCCchHHHHHHHHhCCCCceEE
Confidence 357899999994 5688888888875 6799999999999998876421 1 12221111110 123469999
Q ss_pred EecCcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 183 VSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 183 ~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
+-+..- ..++.+.+.|++||++++...
T Consensus 222 id~~g~-------~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 222 FDSVGK-------DTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp EECCGG-------GGHHHHHHHEEEEEEEEECCC
T ss_pred EECCCh-------HHHHHHHHHhccCCEEEEEcC
Confidence 865432 357888899999999988753
No 353
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=94.35 E-value=0.12 Score=46.49 Aligned_cols=92 Identities=18% Similarity=0.195 Sum_probs=64.8
Q ss_pred CCCCEEEEEcC--ccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC------CCCCCccEEE
Q 019479 112 DRNMRVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP------FPTDYADRYV 183 (340)
Q Consensus 112 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~------~~~~~fD~v~ 183 (340)
+++.+||-+|+ |.|..+..+++.. +.+|+++|.+++..+.+++... . .++..+ .++. .....+|+|+
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga-~--~v~~~~-~~~~~~v~~~~~~~g~Dvvi 232 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKSVGA-D--IVLPLE-EGWAKAVREATGGAGVDMVV 232 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHTC-S--EEEESS-TTHHHHHHHHTTTSCEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCC-c--EEecCc-hhHHHHHHHHhCCCCceEEE
Confidence 57899999997 5688888888885 6799999999999998887532 1 122222 2110 1233699998
Q ss_pred ecCcccccCCHHHHHHHHHHhcccCcEEEEEc
Q 019479 184 SAGSIEYWPDPQRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 184 ~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~ 215 (340)
-+..- ..+..+.+.|++||++++..
T Consensus 233 d~~g~-------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 233 DPIGG-------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp ESCC---------CHHHHHHTEEEEEEEEEC-
T ss_pred ECCch-------hHHHHHHHhhcCCCEEEEEE
Confidence 65442 25778889999999998864
No 354
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=94.30 E-value=0.02 Score=52.06 Aligned_cols=96 Identities=21% Similarity=0.185 Sum_probs=63.8
Q ss_pred CCCCEEEEEcCc-cchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCC-CC--CCCCCCccEEEecCc
Q 019479 112 DRNMRVVDVGGG-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAE-DL--PFPTDYADRYVSAGS 187 (340)
Q Consensus 112 ~~~~~vLDiGcG-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~-~~--~~~~~~fD~v~~~~~ 187 (340)
+++.+||-+|+| .|..+..+++.. +.+|+++|.+++..+.+++... . .++..+-. ++ ... +.+|+|+-...
T Consensus 178 ~~g~~VlV~GaG~vG~~~~qlak~~-Ga~Vi~~~~~~~~~~~~~~lGa-~--~v~~~~~~~~~~~~~~-~~~D~vid~~g 252 (360)
T 1piw_A 178 GPGKKVGIVGLGGIGSMGTLISKAM-GAETYVISRSSRKREDAMKMGA-D--HYIATLEEGDWGEKYF-DTFDLIVVCAS 252 (360)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHHTC-S--EEEEGGGTSCHHHHSC-SCEEEEEECCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHcCC-C--EEEcCcCchHHHHHhh-cCCCEEEECCC
Confidence 578999999986 478888888875 6789999999998898886432 1 12211101 10 011 46999986543
Q ss_pred ccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 188 IEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 188 l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
... ...++.+.+.|++||++++...
T Consensus 253 ~~~----~~~~~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 253 SLT----DIDFNIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp CST----TCCTTTGGGGEEEEEEEEECCC
T ss_pred CCc----HHHHHHHHHHhcCCCEEEEecC
Confidence 300 1234567889999999987653
No 355
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=94.28 E-value=0.035 Score=50.58 Aligned_cols=94 Identities=20% Similarity=0.086 Sum_probs=65.6
Q ss_pred CCCCEEEEEc--CccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC-----CCCCCccEEEe
Q 019479 112 DRNMRVVDVG--GGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP-----FPTDYADRYVS 184 (340)
Q Consensus 112 ~~~~~vLDiG--cG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~-----~~~~~fD~v~~ 184 (340)
+++.+||-+| +|.|..+..+++.. +.+|+++|.+++..+.+++... . .++..+-.++. .....+|+|+-
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~Ga-~--~~~~~~~~~~~~~~~~~~~~g~D~vid 237 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKSLGC-D--RPINYKTEPVGTVLKQEYPEGVDVVYE 237 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTC-S--EEEETTTSCHHHHHHHHCTTCEEEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHcCC-c--EEEecCChhHHHHHHHhcCCCCCEEEE
Confidence 5789999999 45788888888875 6799999999998888876321 1 12211111100 11246999986
Q ss_pred cCcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 185 AGSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 185 ~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
+..- ..++.+.+.|+++|++++...
T Consensus 238 ~~g~-------~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 238 SVGG-------AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp CSCT-------HHHHHHHHHEEEEEEEEECCC
T ss_pred CCCH-------HHHHHHHHHHhcCCEEEEEeC
Confidence 5431 477889999999999988753
No 356
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.24 E-value=0.27 Score=48.80 Aligned_cols=145 Identities=14% Similarity=0.178 Sum_probs=93.3
Q ss_pred CCCEEEEEcCccchHHHHHHHhCC--------CceEEEEeCCHHHHHHHHHhCC--------------------------
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVD--------AKNVTILDQSPHQLAKAKQKEP-------------------------- 158 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~--------~~~v~g~D~s~~~~~~a~~~~~-------------------------- 158 (340)
+...|+-+|||-=.....+....+ +.+++=+|. |+.++.-++.+.
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~-p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDY-SDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFL 185 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEEC-HHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECcc-HHHHHHHHHHHHcChHHHHhhccccccccccccccccc
Confidence 457899999999888887766533 567888898 666554433221
Q ss_pred -CCCcEEEEcCCCCCC----------C-CCCCccEEEecCcccccCCH--HHHHHHHHHhcccCcEEEEEccCCC---ch
Q 019479 159 -LKECTIIEGDAEDLP----------F-PTDYADRYVSAGSIEYWPDP--QRGIKEAYRVLKIGGKACVIGPVYP---TF 221 (340)
Q Consensus 159 -~~~i~~~~~d~~~~~----------~-~~~~fD~v~~~~~l~~~~d~--~~~l~~~~~~LkpgG~l~i~~~~~~---~~ 221 (340)
..+..++..|+.+.. + ....-=++++-.++.+++.. .++|+.+.+ + ++|.+++.+...+ ..
T Consensus 186 ~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~-~-~~~~~~~~e~~~~~~~~d 263 (695)
T 2zwa_A 186 TTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSK-M-ENSHFIILEQLIPKGPFE 263 (695)
T ss_dssp ECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHT-S-SSEEEEEEEECCTTCTTS
T ss_pred cCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhh-C-CCceEEEEEeecCCCCCC
Confidence 036778889997631 1 22223467778888888654 367887775 4 6777776664433 11
Q ss_pred hHhh-HhhhH---------hhcCCCHHHHHHHHHHCCCcEEEEEEeCCc
Q 019479 222 WLSR-FFADV---------WMLFPKEEEYIEWFQKAGFKDVKLKRIGPK 260 (340)
Q Consensus 222 ~~~~-~~~~~---------~~~~~~~~~~~~~l~~aGF~~v~~~~~~~~ 260 (340)
...+ ..... ...+.+.++..+.|.+.||+.+...++...
T Consensus 264 ~f~~~m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v~~~~~~~~ 312 (695)
T 2zwa_A 264 PFSKQMLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGFAYVNVGDMFQL 312 (695)
T ss_dssp HHHHHHHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCCEEEEEEHHHH
T ss_pred hHHHHHHHHHHHcCCCCCccccCCCHHHHHHHHHHCCCCCcceeeHHHH
Confidence 1111 11111 112567999999999999998888876543
No 357
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.22 E-value=0.039 Score=49.89 Aligned_cols=94 Identities=16% Similarity=0.268 Sum_probs=64.6
Q ss_pred CCCEEEEEcCc-cchHHHHHHHhCCCc-eEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC------CCCCCccEEEe
Q 019479 113 RNMRVVDVGGG-TGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP------FPTDYADRYVS 184 (340)
Q Consensus 113 ~~~~vLDiGcG-~G~~~~~l~~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~------~~~~~fD~v~~ 184 (340)
++.+||-+|+| .|..+..+++.. +. +|+++|.+++..+.+++... . .++..+-.++. .....+|+|+-
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~~Ga-~--~~~~~~~~~~~~~v~~~~~g~g~D~vid 242 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKAS-GAYPVIVSEPSDFRRELAKKVGA-D--YVINPFEEDVVKEVMDITDGNGVDVFLE 242 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHHHHHHHTC-S--EEECTTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCC-C--EEECCCCcCHHHHHHHHcCCCCCCEEEE
Confidence 78899999996 378888888875 56 89999999999888886432 1 11111111110 11235999986
Q ss_pred cCcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 185 AGSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 185 ~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
.... ...++.+.+.|+++|+++....
T Consensus 243 ~~g~------~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 243 FSGA------PKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp CSCC------HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCCC------HHHHHHHHHHHhcCCEEEEEcc
Confidence 5331 3567889999999999988754
No 358
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.19 E-value=0.029 Score=50.22 Aligned_cols=95 Identities=15% Similarity=0.076 Sum_probs=65.8
Q ss_pred CCCCCEEEEEc--CccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC------CCCCCccEE
Q 019479 111 FDRNMRVVDVG--GGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP------FPTDYADRY 182 (340)
Q Consensus 111 ~~~~~~vLDiG--cG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~------~~~~~fD~v 182 (340)
.+++.+||-+| +|.|..+..+++.. +.+|+++|.+++..+.+++.... ..+..+-.++. .....+|+|
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~Ga~---~~~~~~~~~~~~~~~~~~~~~g~Dvv 213 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKAL-GAKLIGTVSSPEKAAHAKALGAW---ETIDYSHEDVAKRVLELTDGKKCPVV 213 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHTCS---EEEETTTSCHHHHHHHHTTTCCEEEE
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCC---EEEeCCCccHHHHHHHHhCCCCceEE
Confidence 35789999999 35688888888875 67999999999999998865321 12211111110 123469999
Q ss_pred EecCcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 183 VSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 183 ~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
+-+..- ..+..+.+.|++||++++...
T Consensus 214 id~~g~-------~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 214 YDGVGQ-------DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp EESSCG-------GGHHHHHTTEEEEEEEEECCC
T ss_pred EECCCh-------HHHHHHHHHhcCCCEEEEEec
Confidence 865432 356788999999999988753
No 359
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=94.09 E-value=0.025 Score=51.12 Aligned_cols=94 Identities=16% Similarity=0.162 Sum_probs=65.1
Q ss_pred CCCCEEEEEcC--ccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCC---CCC-----CCCCCccE
Q 019479 112 DRNMRVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAE---DLP-----FPTDYADR 181 (340)
Q Consensus 112 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~---~~~-----~~~~~fD~ 181 (340)
.++++||.+|+ |.|..+..+++.. +.+|+++|.+++..+.+++... . .++ |.. ++. ...+.+|+
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~~g~-~--~~~--d~~~~~~~~~~~~~~~~~~~D~ 241 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRSIGG-E--VFI--DFTKEKDIVGAVLKATDGGAHG 241 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHHTTC-C--EEE--ETTTCSCHHHHHHHHHTSCEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHHcCC-c--eEE--ecCccHhHHHHHHHHhCCCCCE
Confidence 57899999998 5778888887764 6799999999888888875321 1 111 322 110 11126899
Q ss_pred EEecCcccccCCHHHHHHHHHHhcccCcEEEEEccC
Q 019479 182 YVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 182 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
|+.+... ...++.+.+.|+++|++++....
T Consensus 242 vi~~~g~------~~~~~~~~~~l~~~G~iv~~g~~ 271 (347)
T 2hcy_A 242 VINVSVS------EAAIEASTRYVRANGTTVLVGMP 271 (347)
T ss_dssp EEECSSC------HHHHHHHTTSEEEEEEEEECCCC
T ss_pred EEECCCc------HHHHHHHHHHHhcCCEEEEEeCC
Confidence 9865432 35788899999999999887543
No 360
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.05 E-value=0.096 Score=46.89 Aligned_cols=57 Identities=16% Similarity=0.179 Sum_probs=46.8
Q ss_pred HHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC
Q 019479 98 EDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP 158 (340)
Q Consensus 98 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~ 158 (340)
..+...++.... .++..|||.-||+|..+....+. +.+.+|+|+++..++.+++++.
T Consensus 239 ~~l~~~~i~~~~--~~~~~VlDpF~GsGtt~~aa~~~--gr~~ig~e~~~~~~~~~~~r~~ 295 (323)
T 1boo_A 239 AKLPEFFIRMLT--EPDDLVVDIFGGSNTTGLVAERE--SRKWISFEMKPEYVAASAFRFL 295 (323)
T ss_dssp THHHHHHHHHHC--CTTCEEEETTCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHGGGS
T ss_pred HHHHHHHHHHhC--CCCCEEEECCCCCCHHHHHHHHc--CCCEEEEeCCHHHHHHHHHHHH
Confidence 345555554432 47899999999999999988777 8899999999999999998854
No 361
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=94.01 E-value=0.29 Score=44.15 Aligned_cols=92 Identities=13% Similarity=0.190 Sum_probs=64.1
Q ss_pred CCCCEEEEEcC--ccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC--------CCCCCccE
Q 019479 112 DRNMRVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP--------FPTDYADR 181 (340)
Q Consensus 112 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~--------~~~~~fD~ 181 (340)
+++.+||-.|+ |.|..+..+++.. +.+|+++|.+++..+.+++... . ..+ |..+.. .....+|+
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga-~--~~~--d~~~~~~~~~~~~~~~~~~~D~ 242 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQNGA-H--EVF--NHREVNYIDKIKKYVGEKGIDI 242 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTC-S--EEE--ETTSTTHHHHHHHHHCTTCEEE
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHcCC-C--EEE--eCCCchHHHHHHHHcCCCCcEE
Confidence 57899999997 5677888888775 6799999999998888775421 1 111 221111 11236999
Q ss_pred EEecCcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 182 YVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 182 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
|+.+..- ..+..+.+.|+++|++++...
T Consensus 243 vi~~~G~-------~~~~~~~~~l~~~G~iv~~g~ 270 (351)
T 1yb5_A 243 IIEMLAN-------VNLSKDLSLLSHGGRVIVVGS 270 (351)
T ss_dssp EEESCHH-------HHHHHHHHHEEEEEEEEECCC
T ss_pred EEECCCh-------HHHHHHHHhccCCCEEEEEec
Confidence 9865431 357788999999999988753
No 362
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=93.95 E-value=0.039 Score=50.64 Aligned_cols=96 Identities=23% Similarity=0.278 Sum_probs=65.9
Q ss_pred CCCCEEEEEcCc-cchHHHHHHHhCCC-ceEEEEeCCHHHHHHHHHhCCCCCcEEEEcC------CC-CC-CC-CCCCcc
Q 019479 112 DRNMRVVDVGGG-TGFTTLGIVKHVDA-KNVTILDQSPHQLAKAKQKEPLKECTIIEGD------AE-DL-PF-PTDYAD 180 (340)
Q Consensus 112 ~~~~~vLDiGcG-~G~~~~~l~~~~~~-~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d------~~-~~-~~-~~~~fD 180 (340)
.++.+||-+|+| .|..+..+++.. + .+|+++|.+++..+.+++... . .++..+ +. .+ .. ....+|
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~~~~lGa-~--~vi~~~~~~~~~~~~~v~~~~~g~g~D 269 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSL-GAENVIVIAGSPNRLKLAEEIGA-D--LTLNRRETSVEERRKAIMDITHGRGAD 269 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHT-TBSEEEEEESCHHHHHHHHHTTC-S--EEEETTTSCHHHHHHHHHHHTTTSCEE
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHc-CCceEEEEcCCHHHHHHHHHcCC-c--EEEeccccCcchHHHHHHHHhCCCCCc
Confidence 578999999976 478888888886 5 699999999999999986422 1 122211 10 00 01 123699
Q ss_pred EEEecCcccccCCHHHHHHHHHHhcccCcEEEEEccC
Q 019479 181 RYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 181 ~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
+|+-.... ...++.+.+.|+++|++++....
T Consensus 270 vvid~~g~------~~~~~~~~~~l~~~G~iv~~G~~ 300 (380)
T 1vj0_A 270 FILEATGD------SRALLEGSELLRRGGFYSVAGVA 300 (380)
T ss_dssp EEEECSSC------TTHHHHHHHHEEEEEEEEECCCC
T ss_pred EEEECCCC------HHHHHHHHHHHhcCCEEEEEecC
Confidence 99864331 13578889999999999887543
No 363
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=93.89 E-value=2.5 Score=37.47 Aligned_cols=132 Identities=17% Similarity=0.174 Sum_probs=82.3
Q ss_pred CEEEEEcCccchHHHHHHHhCCCc-eEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCC-CCCCccEEEecCcccc--
Q 019479 115 MRVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPF-PTDYADRYVSAGSIEY-- 190 (340)
Q Consensus 115 ~~vLDiGcG~G~~~~~l~~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~-~~~~fD~v~~~~~l~~-- 190 (340)
.+|||+=||.|.++.-+.+. |. .+.++|+++.+++.-+.+.. -.++.+|+.++.. .-..+|+++...-...
T Consensus 1 mkvidLFsG~GG~~~G~~~a--G~~~v~a~e~d~~a~~ty~~N~~---~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~fS 75 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA--GFRIICANEYDKSIWKTYESNHS---AKLIKGDISKISSDEFPKCDGIIGGPPSQSWS 75 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT--TCEEEEEEECCTTTHHHHHHHCC---SEEEESCGGGCCGGGSCCCSEEECCCCGGGTE
T ss_pred CeEEEeCcCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHHCC---CCcccCChhhCCHhhCCcccEEEecCCCCCcC
Confidence 47999999999999988776 54 46689999999999887754 3578899977642 2245899987543332
Q ss_pred -------cCCHH-HHHHH---HHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEeCC
Q 019479 191 -------WPDPQ-RGIKE---AYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRIGP 259 (340)
Q Consensus 191 -------~~d~~-~~l~~---~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~ 259 (340)
..|+. .++.+ +.+.++|. +++.+.+..-... . .-...+.+.+.|++.||.+. ...+..
T Consensus 76 ~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk--~~~~ENV~gl~~~-~-------~~~~~~~i~~~l~~~GY~v~-~~vlna 144 (331)
T 3ubt_Y 76 EGGSLRGIDDPRGKLFYEYIRILKQKKPI--FFLAENVKGMMAQ-R-------HNKAVQEFIQEFDNAGYDVH-IILLNA 144 (331)
T ss_dssp ETTEECCTTCGGGHHHHHHHHHHHHHCCS--EEEEEECCGGGGC-T-------TSHHHHHHHHHHHHHTEEEE-EEEEEG
T ss_pred CCCCccCCCCchhHHHHHHHHHHhccCCe--EEEeeeecccccc-c-------ccchhhhhhhhhccCCcEEE-EEeccc
Confidence 23443 34333 44456774 4445444321100 0 01134667788999999853 444443
Q ss_pred ccc
Q 019479 260 KWY 262 (340)
Q Consensus 260 ~~~ 262 (340)
..|
T Consensus 145 ~~y 147 (331)
T 3ubt_Y 145 NDY 147 (331)
T ss_dssp GGT
T ss_pred ccC
Confidence 333
No 364
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=93.85 E-value=0.072 Score=47.99 Aligned_cols=92 Identities=16% Similarity=0.181 Sum_probs=65.3
Q ss_pred CCCCEEEEEcC--ccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC--------CCCCCccE
Q 019479 112 DRNMRVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP--------FPTDYADR 181 (340)
Q Consensus 112 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~--------~~~~~fD~ 181 (340)
+++.+||-+|+ |.|..+..+++.. +.+|+++|.+++..+.+++... . .++ |..+.. .....+|+
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~ga-~--~~~--d~~~~~~~~~~~~~~~~~~~d~ 238 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLF-GARVIATAGSEDKLRRAKALGA-D--ETV--NYTHPDWPKEVRRLTGGKGADK 238 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTC-S--EEE--ETTSTTHHHHHHHHTTTTCEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhcCC-C--EEE--cCCcccHHHHHHHHhCCCCceE
Confidence 57899999998 6788888888875 6799999999999988876421 1 111 222111 11246999
Q ss_pred EEecCcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 182 YVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 182 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
|+-... . ..++.+.+.|+++|++++...
T Consensus 239 vi~~~g-~------~~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 239 VVDHTG-A------LYFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp EEESSC-S------SSHHHHHHHEEEEEEEEESSC
T ss_pred EEECCC-H------HHHHHHHHhhccCCEEEEEec
Confidence 987654 2 246788899999999987653
No 365
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=93.68 E-value=0.35 Score=43.62 Aligned_cols=92 Identities=9% Similarity=-0.037 Sum_probs=64.0
Q ss_pred CCC--CEEEEEcC--ccchHHHHHHHhCCCc-eEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC-------CCCCCc
Q 019479 112 DRN--MRVVDVGG--GTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP-------FPTDYA 179 (340)
Q Consensus 112 ~~~--~~vLDiGc--G~G~~~~~l~~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~-------~~~~~f 179 (340)
+++ .+||-.|+ |.|..+..+++.. +. +|+++|.+++..+.+++..... .. .|..+.. ...+.+
T Consensus 157 ~~g~~~~vlI~GasggiG~~~~~~a~~~-Ga~~Vi~~~~~~~~~~~~~~~~g~~--~~--~d~~~~~~~~~~~~~~~~~~ 231 (357)
T 2zb4_A 157 TAGSNKTMVVSGAAGACGSVAGQIGHFL-GCSRVVGICGTHEKCILLTSELGFD--AA--INYKKDNVAEQLRESCPAGV 231 (357)
T ss_dssp CTTSCCEEEESSTTBHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCCS--EE--EETTTSCHHHHHHHHCTTCE
T ss_pred CCCCccEEEEECCCcHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHcCCc--eE--EecCchHHHHHHHHhcCCCC
Confidence 467 89999997 5677777777775 66 9999999998888887643321 11 1221111 112268
Q ss_pred cEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEc
Q 019479 180 DRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 180 D~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~ 215 (340)
|+++.+.. ...++.+.+.|++||++++..
T Consensus 232 d~vi~~~G-------~~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 232 DVYFDNVG-------GNISDTVISQMNENSHIILCG 260 (357)
T ss_dssp EEEEESCC-------HHHHHHHHHTEEEEEEEEECC
T ss_pred CEEEECCC-------HHHHHHHHHHhccCcEEEEEC
Confidence 99986544 256888999999999998764
No 366
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.67 E-value=0.61 Score=35.63 Aligned_cols=89 Identities=19% Similarity=0.269 Sum_probs=54.8
Q ss_pred CCEEEEEcCccchHHHHHHHhC--CCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC----CCCCCccEEEecCc
Q 019479 114 NMRVVDVGGGTGFTTLGIVKHV--DAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP----FPTDYADRYVSAGS 187 (340)
Q Consensus 114 ~~~vLDiGcG~G~~~~~l~~~~--~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~----~~~~~fD~v~~~~~ 187 (340)
..+|+-+|||. ++..+++.+ .+.+|+++|.+++.++.+++ .++.++.+|..+.. .....+|+|+....
T Consensus 6 ~~~v~I~G~G~--iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 6 RYEYIVIGSEA--AGVGLVRELTAAGKKVLAVDKSKEKIELLED----EGFDAVIADPTDESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TTCEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred CCEEEEECCCH--HHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----CCCcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence 45799999964 444333322 27899999999998888775 34678888886521 12346898887432
Q ss_pred ccccCCHH--HHHHHHHHhcccCcEEEEE
Q 019479 188 IEYWPDPQ--RGIKEAYRVLKIGGKACVI 214 (340)
Q Consensus 188 l~~~~d~~--~~l~~~~~~LkpgG~l~i~ 214 (340)
+.. ..+....+.+. ..+++..
T Consensus 80 -----~~~~n~~~~~~a~~~~-~~~iia~ 102 (141)
T 3llv_A 80 -----DDEFNLKILKALRSVS-DVYAIVR 102 (141)
T ss_dssp -----CHHHHHHHHHHHHHHC-CCCEEEE
T ss_pred -----CHHHHHHHHHHHHHhC-CceEEEE
Confidence 322 23334444455 4555444
No 367
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=93.67 E-value=0.14 Score=45.15 Aligned_cols=93 Identities=22% Similarity=0.319 Sum_probs=55.6
Q ss_pred CCcEEEEcCCCC-CC-CCCCCccEEEecCcccccC--------------------CHHHHHHHHHHhcccCcEEEEEccC
Q 019479 160 KECTIIEGDAED-LP-FPTDYADRYVSAGSIEYWP--------------------DPQRGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 160 ~~i~~~~~d~~~-~~-~~~~~fD~v~~~~~l~~~~--------------------d~~~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
.+++++++|..+ +. +++++||+|+++--..... ....+++++.++|||||.+++....
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d 99 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGD 99 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECC
Confidence 456889999865 22 4678899999975543221 1135678999999999999887432
Q ss_pred CCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEE
Q 019479 218 YPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLK 255 (340)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~ 255 (340)
..... ... .....+.....+..+++++||......
T Consensus 100 ~~~~~-~~~--g~~~~~~~~~~l~~~~~~~Gf~~~~~i 134 (297)
T 2zig_A 100 VAVAR-RRF--GRHLVFPLHADIQVRCRKLGFDNLNPI 134 (297)
T ss_dssp EEEEC-C------EEEECHHHHHHHHHHHTTCEEEEEE
T ss_pred Ccccc-ccC--CcccccccHHHHHHHHHHcCCeeeccE
Confidence 11000 000 000001113567788999999876543
No 368
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=93.53 E-value=0.025 Score=50.00 Aligned_cols=93 Identities=14% Similarity=0.131 Sum_probs=62.7
Q ss_pred CCCCCEEEEEcC--ccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCC-CCCCCCCCCccEEEecCc
Q 019479 111 FDRNMRVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDA-EDLPFPTDYADRYVSAGS 187 (340)
Q Consensus 111 ~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~-~~~~~~~~~fD~v~~~~~ 187 (340)
.+++.+||-+|+ |.|..+..+++.. +.+|+++|.+++..+.+++... . .++..+- .++...-+.+|+|+- ..
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga-~--~~~~~~~~~~~~~~~~~~d~vid-~g 197 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLALGA-E--EAATYAEVPERAKAWGGLDLVLE-VR 197 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHHTTC-S--EEEEGGGHHHHHHHTTSEEEEEE-CS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhcCC-C--EEEECCcchhHHHHhcCceEEEE-CC
Confidence 457899999997 5688888888875 6799999999998888875321 1 1111110 010000046999986 32
Q ss_pred ccccCCHHHHHHHHHHhcccCcEEEEEc
Q 019479 188 IEYWPDPQRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 188 l~~~~d~~~~l~~~~~~LkpgG~l~i~~ 215 (340)
- ..++.+.+.|+++|+++...
T Consensus 198 ~-------~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 198 G-------KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp C-------TTHHHHHTTEEEEEEEEEC-
T ss_pred H-------HHHHHHHHhhccCCEEEEEe
Confidence 2 25788899999999998764
No 369
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=93.51 E-value=0.055 Score=49.05 Aligned_cols=94 Identities=15% Similarity=0.090 Sum_probs=64.9
Q ss_pred CCCCEEEEEc--CccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC-----CCCCCccEEEe
Q 019479 112 DRNMRVVDVG--GGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP-----FPTDYADRYVS 184 (340)
Q Consensus 112 ~~~~~vLDiG--cG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~-----~~~~~fD~v~~ 184 (340)
+++.+||-+| +|.|..+..+++.. +.+|+++|.+++..+.+++.... ..+..+-.++. .....+|+|+-
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lGa~---~~~~~~~~~~~~~~~~~~~~g~Dvvid 241 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAF-GAEVYATAGSTGKCEACERLGAK---RGINYRSEDFAAVIKAETGQGVDIILD 241 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTCS---EEEETTTSCHHHHHHHHHSSCEEEEEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCC---EEEeCCchHHHHHHHHHhCCCceEEEE
Confidence 5789999995 34688888888875 67999999999999988875321 11211111110 11346999987
Q ss_pred cCcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 185 AGSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 185 ~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
+..- ..+..+.+.|+++|++++...
T Consensus 242 ~~g~-------~~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 242 MIGA-------AYFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp SCCG-------GGHHHHHHTEEEEEEEEECCC
T ss_pred CCCH-------HHHHHHHHHhccCCEEEEEEe
Confidence 5442 256788899999999988754
No 370
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.49 E-value=0.25 Score=44.03 Aligned_cols=92 Identities=10% Similarity=0.070 Sum_probs=63.7
Q ss_pred CCCCEEEEEc--CccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC--------CCCCCccE
Q 019479 112 DRNMRVVDVG--GGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP--------FPTDYADR 181 (340)
Q Consensus 112 ~~~~~vLDiG--cG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~--------~~~~~fD~ 181 (340)
+++++||-.| +|.|..+..+++.. +.+|+++|.+++..+.+++... . ..+ |..+.. .....+|+
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~g~-~--~~~--~~~~~~~~~~~~~~~~~~~~D~ 212 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKAL-GAKLIGTVGTAQKAQSALKAGA-W--QVI--NYREEDLVERLKEITGGKKVRV 212 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHTC-S--EEE--ETTTSCHHHHHHHHTTTCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCC-C--EEE--ECCCccHHHHHHHHhCCCCceE
Confidence 5789999999 35677777777765 6799999999988888876421 1 111 221111 11236999
Q ss_pred EEecCcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 182 YVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 182 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
++.+.. ...++.+.+.|++||++++...
T Consensus 213 vi~~~g-------~~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 213 VYDSVG-------RDTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp EEECSC-------GGGHHHHHHTEEEEEEEEECCC
T ss_pred EEECCc-------hHHHHHHHHHhcCCCEEEEEec
Confidence 987644 2357888999999999988753
No 371
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=93.30 E-value=0.1 Score=46.62 Aligned_cols=95 Identities=16% Similarity=0.190 Sum_probs=62.3
Q ss_pred CCCC-EEEEEcC--ccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCC-CC--CCCCCCCccEEEec
Q 019479 112 DRNM-RVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDA-ED--LPFPTDYADRYVSA 185 (340)
Q Consensus 112 ~~~~-~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~-~~--~~~~~~~fD~v~~~ 185 (340)
.++. +||-+|+ |.|..+..+++.. +.+|++++.+++..+.+++... ..+ +-..+. .+ .....+.+|+|+-.
T Consensus 147 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~lGa-~~~-i~~~~~~~~~~~~~~~~~~d~vid~ 223 (328)
T 1xa0_A 147 TPERGPVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRVLGA-KEV-LAREDVMAERIRPLDKQRWAAAVDP 223 (328)
T ss_dssp CGGGCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHHTTC-SEE-EECC---------CCSCCEEEEEEC
T ss_pred CCCCceEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHcCC-cEE-EecCCcHHHHHHHhcCCcccEEEEC
Confidence 3454 7999997 5788888888885 6789999999888888876422 111 111111 01 01223469998864
Q ss_pred CcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 186 GSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 186 ~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
..- ..+..+.+.|++||++++...
T Consensus 224 ~g~-------~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 224 VGG-------RTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp STT-------TTHHHHHHTEEEEEEEEECSC
T ss_pred CcH-------HHHHHHHHhhccCCEEEEEee
Confidence 331 246788899999999988753
No 372
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=93.24 E-value=0.47 Score=42.77 Aligned_cols=94 Identities=13% Similarity=0.095 Sum_probs=63.5
Q ss_pred CCCCEEEEEcC--ccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCC-----C-CCCCCccEEE
Q 019479 112 DRNMRVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDL-----P-FPTDYADRYV 183 (340)
Q Consensus 112 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~-----~-~~~~~fD~v~ 183 (340)
.++.+||-.|+ |.|..+..+++.. +.+|+++|.+++.++.+++... . ..+..+-.+. . .....+|+++
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~g~-~--~~~~~~~~~~~~~~~~~~~~~~~d~vi 236 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMA-GAIPLVTAGSQKKLQMAEKLGA-A--AGFNYKKEDFSEATLKFTKGAGVNLIL 236 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTC-S--EEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCC-c--EEEecCChHHHHHHHHHhcCCCceEEE
Confidence 57899999984 5778888888774 6799999999998888865422 1 1111111110 0 1224699998
Q ss_pred ecCcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 184 SAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 184 ~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
-+..- ..+..+.+.|++||++++...
T Consensus 237 ~~~G~-------~~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 237 DCIGG-------SYWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp ESSCG-------GGHHHHHHHEEEEEEEEECCC
T ss_pred ECCCc-------hHHHHHHHhccCCCEEEEEec
Confidence 65442 146778899999999988754
No 373
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=93.24 E-value=0.095 Score=47.53 Aligned_cols=96 Identities=21% Similarity=0.303 Sum_probs=62.7
Q ss_pred CCCEEEEEcCc-cchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCccccc
Q 019479 113 RNMRVVDVGGG-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEYW 191 (340)
Q Consensus 113 ~~~~vLDiGcG-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 191 (340)
++.+||-+|+| .|..+..+++.. +.+|+++|.+++..+.+++......+ +-..+.+.+....+.+|+|+-...-.
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~g~D~vid~~g~~-- 255 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAM-GHHVTVISSSNKKREEALQDLGADDY-VIGSDQAKMSELADSLDYVIDTVPVH-- 255 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSTTHHHHHHTTSCCSCE-EETTCHHHHHHSTTTEEEEEECCCSC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHcCCcee-eccccHHHHHHhcCCCCEEEECCCCh--
Confidence 78999999986 477788888875 67999999999888888744432221 11111100000113699998644321
Q ss_pred CCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 192 PDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 192 ~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
..++.+.+.|++||++++...
T Consensus 256 ----~~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 256 ----HALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp ----CCSHHHHTTEEEEEEEEECSC
T ss_pred ----HHHHHHHHHhccCCEEEEeCC
Confidence 135667889999999988753
No 374
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=93.23 E-value=0.26 Score=44.32 Aligned_cols=92 Identities=13% Similarity=0.141 Sum_probs=63.6
Q ss_pred CCCEEEEEc-Cc-cchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCC-----CCCCCCccEEEec
Q 019479 113 RNMRVVDVG-GG-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDL-----PFPTDYADRYVSA 185 (340)
Q Consensus 113 ~~~~vLDiG-cG-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~-----~~~~~~fD~v~~~ 185 (340)
++.+||-+| +| .|..+..+++.. +.+|+++|.+++..+.+++... . .++..+ +++ ......+|+|+-.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa-~--~vi~~~-~~~~~~~~~~~~~g~Dvv~d~ 224 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY-GLRVITTASRNETIEWTKKMGA-D--IVLNHK-ESLLNQFKTQGIELVDYVFCT 224 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCSHHHHHHHHHHTC-S--EEECTT-SCHHHHHHHHTCCCEEEEEES
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCC-c--EEEECC-ccHHHHHHHhCCCCccEEEEC
Confidence 688999994 44 688888888875 6799999999999999987532 1 111111 110 0123469998863
Q ss_pred CcccccCCHHHHHHHHHHhcccCcEEEEEc
Q 019479 186 GSIEYWPDPQRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 186 ~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~ 215 (340)
. .....+..+.+.|+++|+++...
T Consensus 225 ~------g~~~~~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 225 F------NTDMYYDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp S------CHHHHHHHHHHHEEEEEEEEESS
T ss_pred C------CchHHHHHHHHHhccCCEEEEEC
Confidence 2 23456788999999999997653
No 375
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=93.22 E-value=0.17 Score=45.26 Aligned_cols=59 Identities=15% Similarity=0.164 Sum_probs=48.2
Q ss_pred chHHHHHHhccccCCCCCCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCH---HHHHHHHHhCC
Q 019479 96 WTEDMRDEALEPADLFDRNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSP---HQLAKAKQKEP 158 (340)
Q Consensus 96 ~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~---~~~~~a~~~~~ 158 (340)
....+...++.... .++..|||.-||+|..+....+. +.+.+|+|+++ ..++.+++++.
T Consensus 227 kp~~l~~~~i~~~~--~~~~~vlDpF~GsGtt~~aa~~~--~r~~ig~e~~~~~~~~~~~~~~Rl~ 288 (319)
T 1eg2_A 227 KPAAVIERLVRALS--HPGSTVLDFFAGSGVTARVAIQE--GRNSICTDAAPVFKEYYQKQLTFLQ 288 (319)
T ss_dssp CCHHHHHHHHHHHS--CTTCEEEETTCTTCHHHHHHHHH--TCEEEEEESSTHHHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHhC--CCCCEEEecCCCCCHHHHHHHHc--CCcEEEEECCccHHHHHHHHHHHHH
Confidence 34556666665543 47899999999999999998887 78999999999 99999998864
No 376
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=93.13 E-value=0.15 Score=46.30 Aligned_cols=95 Identities=20% Similarity=0.264 Sum_probs=62.4
Q ss_pred CCCEEEEEcCc-cchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEc-CCCCCCCCCCCccEEEecCcccc
Q 019479 113 RNMRVVDVGGG-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEG-DAEDLPFPTDYADRYVSAGSIEY 190 (340)
Q Consensus 113 ~~~~vLDiGcG-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~-d~~~~~~~~~~fD~v~~~~~l~~ 190 (340)
++.+||-+|+| .|..+..+++.. +.+|+++|.+++..+.+++...... ++.. +.+.+....+.+|+|+-......
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~lGa~~--v~~~~~~~~~~~~~~~~D~vid~~g~~~ 263 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAF-GSKVTVISTSPSKKEEALKNFGADS--FLVSRDQEQMQAAAGTLDGIIDTVSAVH 263 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGHHHHHHTSCCSE--EEETTCHHHHHHTTTCEEEEEECCSSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhcCCce--EEeccCHHHHHHhhCCCCEEEECCCcHH
Confidence 78899999986 377788888875 6799999999998888875443221 1111 10001001136999986543221
Q ss_pred cCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 191 WPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 191 ~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
.++.+.+.|+++|+++....
T Consensus 264 ------~~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 264 ------PLLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp ------CSHHHHHHEEEEEEEEECCC
T ss_pred ------HHHHHHHHHhcCCEEEEEcc
Confidence 24567789999999987754
No 377
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=93.12 E-value=0.42 Score=43.71 Aligned_cols=76 Identities=14% Similarity=0.273 Sum_probs=53.0
Q ss_pred CCCEEEEEcCccchHHHHHHHhC-------CCceEEEEeCCHHHHHHHHHhCCCC-CcEEEEcCCCCCCCCCCCccEEEe
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHV-------DAKNVTILDQSPHQLAKAKQKEPLK-ECTIIEGDAEDLPFPTDYADRYVS 184 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~-------~~~~v~g~D~s~~~~~~a~~~~~~~-~i~~~~~d~~~~~~~~~~fD~v~~ 184 (340)
.+..|+|+|.|+|.++..+++.. ...+++.||+|+...+.-++++... ++.+. .+++++| +. .-+|++
T Consensus 80 ~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~~~v~W~-~~l~~lp--~~-~~~viA 155 (387)
T 1zkd_A 80 QTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGIRNIHWH-DSFEDVP--EG-PAVILA 155 (387)
T ss_dssp SSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTCSSEEEE-SSGGGSC--CS-SEEEEE
T ss_pred CCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCCCCeEEe-CChhhcC--CC-CeEEEe
Confidence 35679999999999999887642 2358999999998888766665432 34433 3445554 22 457888
Q ss_pred cCcccccC
Q 019479 185 AGSIEYWP 192 (340)
Q Consensus 185 ~~~l~~~~ 192 (340)
+.++..++
T Consensus 156 NE~fDAlP 163 (387)
T 1zkd_A 156 NEYFDVLP 163 (387)
T ss_dssp ESSGGGSC
T ss_pred ccccccCc
Confidence 88877665
No 378
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=93.00 E-value=0.41 Score=42.74 Aligned_cols=92 Identities=12% Similarity=0.080 Sum_probs=64.1
Q ss_pred CCCCEEEEEcC--ccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC--------CCCCCccE
Q 019479 112 DRNMRVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP--------FPTDYADR 181 (340)
Q Consensus 112 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~--------~~~~~fD~ 181 (340)
.++.+||-.|+ |.|..+..+++.. +.+|+++|.+++..+.+++... . ..+ |..+.. .....+|+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~g~-~--~~~--d~~~~~~~~~i~~~~~~~~~d~ 217 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHL-GATVIGTVSTEEKAETARKLGC-H--HTI--NYSTQDFAEVVREITGGKGVDV 217 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTC-S--EEE--ETTTSCHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCC-C--EEE--ECCCHHHHHHHHHHhCCCCCeE
Confidence 57899999995 6788888888775 6799999999988888876421 1 111 222111 11235999
Q ss_pred EEecCcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 182 YVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 182 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
|+.+..- ..++.+.+.|++||++++...
T Consensus 218 vi~~~g~-------~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 218 VYDSIGK-------DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp EEECSCT-------TTHHHHHHTEEEEEEEEECCC
T ss_pred EEECCcH-------HHHHHHHHhhccCCEEEEEec
Confidence 9865432 357888999999999988753
No 379
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=92.97 E-value=0.14 Score=46.01 Aligned_cols=91 Identities=18% Similarity=0.275 Sum_probs=62.9
Q ss_pred CCCEEEEEcCc-cchHHHHHHHhCCCc-eEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC-------CCCCCccEEE
Q 019479 113 RNMRVVDVGGG-TGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP-------FPTDYADRYV 183 (340)
Q Consensus 113 ~~~~vLDiGcG-~G~~~~~l~~~~~~~-~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~-------~~~~~fD~v~ 183 (340)
++.+||-+|+| .|..+..+++.. +. +|+++|.+++.++.+++. . . .++ |..+.. .....+|+|+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~l-a-~--~v~--~~~~~~~~~~~~~~~~~g~D~vi 236 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRAS-GAGPILVSDPNPYRLAFARPY-A-D--RLV--NPLEEDLLEVVRRVTGSGVEVLL 236 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHGGGTTT-C-S--EEE--CTTTSCHHHHHHHHHSSCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-H-H--hcc--CcCccCHHHHHHHhcCCCCCEEE
Confidence 78899999986 377888888875 66 899999999888777653 2 1 111 221111 0134599998
Q ss_pred ecCcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 184 SAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 184 ~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
-...- ...++.+.+.|+++|++++...
T Consensus 237 d~~g~------~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 237 EFSGN------EAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp ECSCC------HHHHHHHHHHEEEEEEEEECCC
T ss_pred ECCCC------HHHHHHHHHHHhcCCEEEEEec
Confidence 64321 3467889999999999988754
No 380
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=92.94 E-value=0.097 Score=47.75 Aligned_cols=93 Identities=15% Similarity=0.245 Sum_probs=62.8
Q ss_pred CCCCEEEEEcC--ccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCC-----CCCCCCccEEEe
Q 019479 112 DRNMRVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDL-----PFPTDYADRYVS 184 (340)
Q Consensus 112 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~-----~~~~~~fD~v~~ 184 (340)
.++.+||-+|+ +.|..+..+++.. +.+|+++. +++-.+.+++.-. . .++...-.++ ....+.+|+|+-
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~-~~~~~~~~~~lGa-~--~vi~~~~~~~~~~v~~~t~g~~d~v~d 237 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS-GYIPIATC-SPHNFDLAKSRGA-E--EVFDYRAPNLAQTIRTYTKNNLRYALD 237 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHHTTC-S--EEEETTSTTHHHHHHHHTTTCCCEEEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEe-CHHHHHHHHHcCC-c--EEEECCCchHHHHHHHHccCCccEEEE
Confidence 47899999998 3789999999885 67898885 8888888876432 1 1222111111 012345999985
Q ss_pred cCcccccCCHHHHHHHHHHhc-ccCcEEEEEc
Q 019479 185 AGSIEYWPDPQRGIKEAYRVL-KIGGKACVIG 215 (340)
Q Consensus 185 ~~~l~~~~d~~~~l~~~~~~L-kpgG~l~i~~ 215 (340)
.-. ....+..+.+.| ++||++++..
T Consensus 238 ~~g------~~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 238 CIT------NVESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp SSC------SHHHHHHHHHHSCTTCEEEEESS
T ss_pred CCC------chHHHHHHHHHhhcCCCEEEEEe
Confidence 332 234678888888 6999998775
No 381
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=92.66 E-value=0.34 Score=43.90 Aligned_cols=89 Identities=13% Similarity=0.110 Sum_probs=61.5
Q ss_pred CCEEEEEcCc-cchHHHHHHHhCCCceEEEEeCCH---HHHHHHHHhCCCCCcEEEEcCCCCCCCC------CCCccEEE
Q 019479 114 NMRVVDVGGG-TGFTTLGIVKHVDAKNVTILDQSP---HQLAKAKQKEPLKECTIIEGDAEDLPFP------TDYADRYV 183 (340)
Q Consensus 114 ~~~vLDiGcG-~G~~~~~l~~~~~~~~v~g~D~s~---~~~~~a~~~~~~~~i~~~~~d~~~~~~~------~~~fD~v~ 183 (340)
+.+||-+|+| .|..+..+++.. +.+|+++|.++ +..+.+++.. ...+ | .+ .+. .+.+|+|+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~~~~g----a~~v--~-~~-~~~~~~~~~~~~~d~vi 251 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY-GLEVWMANRREPTEVEQTVIEETK----TNYY--N-SS-NGYDKLKDSVGKFDVII 251 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH-TCEEEEEESSCCCHHHHHHHHHHT----CEEE--E-CT-TCSHHHHHHHCCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCccchHHHHHHHHhC----Ccee--c-hH-HHHHHHHHhCCCCCEEE
Confidence 8899999985 366777777765 56999999988 7778877542 2222 2 22 111 14699998
Q ss_pred ecCcccccCCHHHHH-HHHHHhcccCcEEEEEccC
Q 019479 184 SAGSIEYWPDPQRGI-KEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 184 ~~~~l~~~~d~~~~l-~~~~~~LkpgG~l~i~~~~ 217 (340)
...... ..+ +.+.+.|+++|++++....
T Consensus 252 d~~g~~------~~~~~~~~~~l~~~G~iv~~g~~ 280 (366)
T 2cdc_A 252 DATGAD------VNILGNVIPLLGRNGVLGLFGFS 280 (366)
T ss_dssp ECCCCC------THHHHHHGGGEEEEEEEEECSCC
T ss_pred ECCCCh------HHHHHHHHHHHhcCCEEEEEecC
Confidence 654321 245 8889999999999887543
No 382
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=92.59 E-value=2.2 Score=32.02 Aligned_cols=92 Identities=17% Similarity=0.243 Sum_probs=53.5
Q ss_pred CCEEEEEcCccchHHHHHHHhC--CCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC----CCCCCccEEEecCc
Q 019479 114 NMRVVDVGGGTGFTTLGIVKHV--DAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP----FPTDYADRYVSAGS 187 (340)
Q Consensus 114 ~~~vLDiGcG~G~~~~~l~~~~--~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~----~~~~~fD~v~~~~~ 187 (340)
+.+|+-+|+|. .+..+++.+ .+.+|+++|.+++.++...+.. ++.++.+|..+.. .....+|+|+....
T Consensus 4 ~m~i~IiG~G~--iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~---~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~ 78 (140)
T 1lss_A 4 GMYIIIAGIGR--VGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI---DALVINGDCTKIKTLEDAGIEDADMYIAVTG 78 (140)
T ss_dssp -CEEEEECCSH--HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---SSEEEESCTTSHHHHHHTTTTTCSEEEECCS
T ss_pred CCEEEEECCCH--HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc---CcEEEEcCCCCHHHHHHcCcccCCEEEEeeC
Confidence 46899998853 333333321 2679999999998877665432 4566777764321 11345899887532
Q ss_pred ccccCCHHHHHHHHHHhcccCcEEEEE
Q 019479 188 IEYWPDPQRGIKEAYRVLKIGGKACVI 214 (340)
Q Consensus 188 l~~~~d~~~~l~~~~~~LkpgG~l~i~ 214 (340)
-. .....+..+.+.++++ .+++.
T Consensus 79 ~~---~~~~~~~~~~~~~~~~-~ii~~ 101 (140)
T 1lss_A 79 KE---EVNLMSSLLAKSYGIN-KTIAR 101 (140)
T ss_dssp CH---HHHHHHHHHHHHTTCC-CEEEE
T ss_pred Cc---hHHHHHHHHHHHcCCC-EEEEE
Confidence 11 1123455566667775 55443
No 383
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=92.54 E-value=0.097 Score=46.80 Aligned_cols=97 Identities=13% Similarity=0.123 Sum_probs=63.6
Q ss_pred CCCC-EEEEEcC--ccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCC-CCCCCCccEEEecCc
Q 019479 112 DRNM-RVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDL-PFPTDYADRYVSAGS 187 (340)
Q Consensus 112 ~~~~-~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~-~~~~~~fD~v~~~~~ 187 (340)
.++. +||-+|+ |.|..+..+++.. +.+|++++.+++..+.+++.....-+.....+.+.. ......+|+|+-...
T Consensus 148 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g 226 (330)
T 1tt7_A 148 SPEKGSVLVTGATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVG 226 (330)
T ss_dssp CGGGCCEEEESTTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCC
T ss_pred CCCCceEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECCc
Confidence 3554 8999997 5788888888875 678999999988888887643211011111111111 122346999886432
Q ss_pred ccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 188 IEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 188 l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
. ..+..+.+.|++||++++...
T Consensus 227 -----~--~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 227 -----G--KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp -----T--HHHHHHHTTEEEEEEEEECCC
T ss_pred -----H--HHHHHHHHhhcCCCEEEEEec
Confidence 2 367889999999999988754
No 384
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=92.49 E-value=0.42 Score=44.65 Aligned_cols=98 Identities=15% Similarity=0.019 Sum_probs=65.8
Q ss_pred CCCCCEEEEEcC--ccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCC----------------
Q 019479 111 FDRNMRVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDL---------------- 172 (340)
Q Consensus 111 ~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~---------------- 172 (340)
.+++.+||-+|+ |.|..+..+++.. +.++++++.+++..+.+++.....-+.....|+.+.
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~-Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNG-GGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLA 296 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHH
Confidence 357899999997 4688888888875 789999999999999987642211111111122100
Q ss_pred ----CCCCCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 173 ----PFPTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 173 ----~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
......+|+|+-.... ..++.+.+.|++||++++...
T Consensus 297 ~~v~~~~g~g~Dvvid~~G~-------~~~~~~~~~l~~~G~iv~~G~ 337 (447)
T 4a0s_A 297 KLVVEKAGREPDIVFEHTGR-------VTFGLSVIVARRGGTVVTCGS 337 (447)
T ss_dssp HHHHHHHSSCCSEEEECSCH-------HHHHHHHHHSCTTCEEEESCC
T ss_pred HHHHHHhCCCceEEEECCCc-------hHHHHHHHHHhcCCEEEEEec
Confidence 0013469999864332 367888899999999988754
No 385
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=92.49 E-value=0.15 Score=45.31 Aligned_cols=93 Identities=17% Similarity=0.075 Sum_probs=60.8
Q ss_pred CCCCEEEEEc-C-ccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCC-CCCCCCCccEEEecCcc
Q 019479 112 DRNMRVVDVG-G-GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAED-LPFPTDYADRYVSAGSI 188 (340)
Q Consensus 112 ~~~~~vLDiG-c-G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~-~~~~~~~fD~v~~~~~l 188 (340)
+++.+||-+| + |.|..+..+++.. +.+|++++ ++...+.+++.... .++..+-.+ +...-..+|+|+-...
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~-Ga~vi~~~-~~~~~~~~~~lGa~---~~i~~~~~~~~~~~~~g~D~v~d~~g- 224 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQK-GTTVITTA-SKRNHAFLKALGAE---QCINYHEEDFLLAISTPVDAVIDLVG- 224 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEE-CHHHHHHHHHHTCS---EEEETTTSCHHHHCCSCEEEEEESSC-
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHc-CCEEEEEe-ccchHHHHHHcCCC---EEEeCCCcchhhhhccCCCEEEECCC-
Confidence 5789999997 4 4688999999886 67999998 45557777765321 122111111 1111146899885432
Q ss_pred cccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 189 EYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 189 ~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
.. .+..+.+.|++||+++....
T Consensus 225 -----~~-~~~~~~~~l~~~G~iv~~g~ 246 (321)
T 3tqh_A 225 -----GD-VGIQSIDCLKETGCIVSVPT 246 (321)
T ss_dssp -----HH-HHHHHGGGEEEEEEEEECCS
T ss_pred -----cH-HHHHHHHhccCCCEEEEeCC
Confidence 22 33888999999999987753
No 386
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=92.48 E-value=0.086 Score=48.14 Aligned_cols=96 Identities=14% Similarity=0.100 Sum_probs=61.8
Q ss_pred CCCCCEEEEEc--CccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC---CCCCCccEEEec
Q 019479 111 FDRNMRVVDVG--GGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP---FPTDYADRYVSA 185 (340)
Q Consensus 111 ~~~~~~vLDiG--cG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~---~~~~~fD~v~~~ 185 (340)
..++.+||-+| .|.|..+..+++.. +.+|++++ +++..+.+++... . .++..+-.++. .....+|+|+-.
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~-Ga~Vi~~~-~~~~~~~~~~lGa-~--~v~~~~~~~~~~~~~~~~g~D~vid~ 255 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW-DAHVTAVC-SQDASELVRKLGA-D--DVIDYKSGSVEEQLKSLKPFDFILDN 255 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHHTTC-S--EEEETTSSCHHHHHHTSCCBSEEEES
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEe-ChHHHHHHHHcCC-C--EEEECCchHHHHHHhhcCCCCEEEEC
Confidence 35789999999 34788888888885 67999999 6777788765321 1 11211111100 011469999864
Q ss_pred CcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 186 GSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 186 ~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
.. .....+....+.|++||+++....
T Consensus 256 ~g-----~~~~~~~~~~~~l~~~G~iv~~g~ 281 (375)
T 2vn8_A 256 VG-----GSTETWAPDFLKKWSGATYVTLVT 281 (375)
T ss_dssp SC-----TTHHHHGGGGBCSSSCCEEEESCC
T ss_pred CC-----ChhhhhHHHHHhhcCCcEEEEeCC
Confidence 33 222356777889999999987653
No 387
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=92.40 E-value=0.39 Score=41.12 Aligned_cols=101 Identities=13% Similarity=0.219 Sum_probs=66.3
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCC----------CCCCc
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPF----------PTDYA 179 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~----------~~~~f 179 (340)
.++++|-.|++.|. .+..++++ +.+|+.+|.+++.++...+... .++.++..|+.+... .-+..
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEG--GAEVLLTGRNESNIARIREEFG-PRVHALRSDIADLNEIAVLGAAAGQTLGAI 83 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHG-GGEEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhC-CcceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 57889988877653 34445554 7899999999988776665432 467888999876320 01368
Q ss_pred cEEEecCcccccC-----CH---H-----------HHHHHHHHhcccCcEEEEEcc
Q 019479 180 DRYVSAGSIEYWP-----DP---Q-----------RGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 180 D~v~~~~~l~~~~-----d~---~-----------~~l~~~~~~LkpgG~l~i~~~ 216 (340)
|+++.+....... +. + .+.+.+.+.++.+|+++.+..
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 139 (255)
T 4eso_A 84 DLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSS 139 (255)
T ss_dssp EEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECC
Confidence 9998876554321 11 1 245566677777888877743
No 388
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=92.25 E-value=0.83 Score=42.73 Aligned_cols=95 Identities=16% Similarity=0.127 Sum_probs=65.8
Q ss_pred CCCCCEEEEEcC--ccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC---------------
Q 019479 111 FDRNMRVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP--------------- 173 (340)
Q Consensus 111 ~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~--------------- 173 (340)
.+++.+||-+|+ |.|..+..+++.. +.++++++.+++-++.+++.-.. .++...-.+..
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~~~~~~lGa~---~vi~~~~~d~~~~~~~~~~~~~~~~~ 301 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALAG-GANPICVVSSPQKAEICRAMGAE---AIIDRNAEGYRFWKDENTQDPKEWKR 301 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTCC---EEEETTTTTCCSEEETTEECHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHHHHHHhhCCc---EEEecCcCcccccccccccchHHHHH
Confidence 357899999997 4688888888885 78999999999999999765321 11111111100
Q ss_pred --------CCCCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 174 --------FPTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 174 --------~~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
.....+|+|+-... . ..+..+.+.|++||++++...
T Consensus 302 ~~~~i~~~t~g~g~Dvvid~~G------~-~~~~~~~~~l~~~G~iv~~G~ 345 (456)
T 3krt_A 302 FGKRIRELTGGEDIDIVFEHPG------R-ETFGASVFVTRKGGTITTCAS 345 (456)
T ss_dssp HHHHHHHHHTSCCEEEEEECSC------H-HHHHHHHHHEEEEEEEEESCC
T ss_pred HHHHHHHHhCCCCCcEEEEcCC------c-hhHHHHHHHhhCCcEEEEEec
Confidence 11246999886432 1 468889999999999988753
No 389
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=92.12 E-value=0.11 Score=46.73 Aligned_cols=91 Identities=14% Similarity=0.103 Sum_probs=63.9
Q ss_pred CCCCEEEEEcC--ccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC------CCCCCccEEE
Q 019479 112 DRNMRVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP------FPTDYADRYV 183 (340)
Q Consensus 112 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~------~~~~~fD~v~ 183 (340)
+++.+||-+|+ |.|..+..+++.. +.+|+++ .+++.++.+++... ..+. +-.++. .....+|+|+
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~-Ga~Vi~~-~~~~~~~~~~~lGa----~~i~-~~~~~~~~~~~~~~~~g~D~vi 221 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALAR-GARVFAT-ARGSDLEYVRDLGA----TPID-ASREPEDYAAEHTAGQGFDLVY 221 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEE-ECHHHHHHHHHHTS----EEEE-TTSCHHHHHHHHHTTSCEEEEE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEE-eCHHHHHHHHHcCC----CEec-cCCCHHHHHHHHhcCCCceEEE
Confidence 57899999994 4688888888875 6799999 88988888876532 2222 221111 1224699988
Q ss_pred ecCcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 184 SAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 184 ~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
-+.. . ..+..+.+.|+++|++++...
T Consensus 222 d~~g-----~--~~~~~~~~~l~~~G~iv~~g~ 247 (343)
T 3gaz_A 222 DTLG-----G--PVLDASFSAVKRFGHVVSCLG 247 (343)
T ss_dssp ESSC-----T--HHHHHHHHHEEEEEEEEESCC
T ss_pred ECCC-----c--HHHHHHHHHHhcCCeEEEEcc
Confidence 6433 1 467888999999999987643
No 390
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.09 E-value=1.2 Score=35.71 Aligned_cols=92 Identities=18% Similarity=0.199 Sum_probs=55.7
Q ss_pred CCCEEEEEcCcc-chHHHHHHHhCC-CceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC----C-CCCCccEEEec
Q 019479 113 RNMRVVDVGGGT-GFTTLGIVKHVD-AKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP----F-PTDYADRYVSA 185 (340)
Q Consensus 113 ~~~~vLDiGcG~-G~~~~~l~~~~~-~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~----~-~~~~fD~v~~~ 185 (340)
.+.+|+-+|+|. |......+.. . +.+|+++|.+++.++.+++ .++.++.+|..+.. . .-..+|+|+..
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~-~~g~~V~vid~~~~~~~~~~~----~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~ 112 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRA-RYGKISLGIEIREEAAQQHRS----EGRNVISGDATDPDFWERILDTGHVKLVLLA 112 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHH-HHCSCEEEEESCHHHHHHHHH----TTCCEEECCTTCHHHHHTBCSCCCCCEEEEC
T ss_pred CCCcEEEECCCHHHHHHHHHHHh-ccCCeEEEEECCHHHHHHHHH----CCCCEEEcCCCCHHHHHhccCCCCCCEEEEe
Confidence 456899999863 3333222222 2 5789999999988887764 24566777775421 1 23458988874
Q ss_pred CcccccCCHH--HHHHHHHHhcccCcEEEEE
Q 019479 186 GSIEYWPDPQ--RGIKEAYRVLKIGGKACVI 214 (340)
Q Consensus 186 ~~l~~~~d~~--~~l~~~~~~LkpgG~l~i~ 214 (340)
. ++.. ..+-...+.+.|++.++..
T Consensus 113 ~-----~~~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 113 M-----PHHQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp C-----SSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred C-----CChHHHHHHHHHHHHHCCCCEEEEE
Confidence 2 2332 2233455566777777664
No 391
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=92.07 E-value=2.3 Score=40.10 Aligned_cols=74 Identities=15% Similarity=0.114 Sum_probs=54.5
Q ss_pred CCEEEEEcCccchHHHHHHHhCCCc-eEEEEeCCHHHHHHHHHhCC-CCCcEEEEcCCCCCCC-----------------
Q 019479 114 NMRVVDVGGGTGFTTLGIVKHVDAK-NVTILDQSPHQLAKAKQKEP-LKECTIIEGDAEDLPF----------------- 174 (340)
Q Consensus 114 ~~~vLDiGcG~G~~~~~l~~~~~~~-~v~g~D~s~~~~~~a~~~~~-~~~i~~~~~d~~~~~~----------------- 174 (340)
..+++|+-||.|.++.-+.+. |. .|.++|+++.+++.-+.+.. .++..++.+|+.++..
T Consensus 88 ~~~viDLFaG~GGlslG~~~a--G~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~~ 165 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI--GGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAAEHIRQ 165 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT--TEEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTTSCHHHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhhhhccccccchhhHHhhhhh
Confidence 468999999999999998776 54 47899999999998887753 2455677888865321
Q ss_pred CCCCccEEEecCccc
Q 019479 175 PTDYADRYVSAGSIE 189 (340)
Q Consensus 175 ~~~~fD~v~~~~~l~ 189 (340)
..+.+|+++...-..
T Consensus 166 ~~~~~Dvl~gGpPCQ 180 (482)
T 3me5_A 166 HIPEHDVLLAGFPCQ 180 (482)
T ss_dssp HSCCCSEEEEECCCC
T ss_pred cCCCCCEEEecCCCc
Confidence 113589998754443
No 392
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=92.06 E-value=0.57 Score=41.21 Aligned_cols=71 Identities=10% Similarity=0.083 Sum_probs=54.1
Q ss_pred CCCCEEEEEcCccchHHHHHHHhCCCce---EEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCC---C-CCCccEEEe
Q 019479 112 DRNMRVVDVGGGTGFTTLGIVKHVDAKN---VTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPF---P-TDYADRYVS 184 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~---v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~---~-~~~fD~v~~ 184 (340)
....+++|+-||.|.++..+.+. |.+ |.++|+++.+++..+.+. ++..+..+|+.++.. + .+.+|+++.
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a--G~~~~~v~a~E~d~~a~~ty~~N~--~~~~~~~~DI~~i~~~~i~~~~~~Dll~g 89 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL--GIQVDRYIASEVCEDSITVGMVRH--QGKIMYVGDVRSVTQKHIQEWGPFDLVIG 89 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT--TBCEEEEEEECCCHHHHHHHHHHT--TTCEEEECCGGGCCHHHHHHTCCCSEEEE
T ss_pred CCCCEEEEeCcCccHHHHHHHHC--CCccceEEEEECCHHHHHHHHHhC--CCCceeCCChHHccHHHhcccCCcCEEEe
Confidence 35679999999999999988876 554 589999999998877765 344678899977541 1 135899997
Q ss_pred cC
Q 019479 185 AG 186 (340)
Q Consensus 185 ~~ 186 (340)
..
T Consensus 90 gp 91 (295)
T 2qrv_A 90 GS 91 (295)
T ss_dssp CC
T ss_pred cC
Confidence 53
No 393
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=92.05 E-value=0.1 Score=47.86 Aligned_cols=101 Identities=21% Similarity=0.165 Sum_probs=58.8
Q ss_pred CCCEEEEEcCcc-chHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCccccc
Q 019479 113 RNMRVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEYW 191 (340)
Q Consensus 113 ~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 191 (340)
++.+|+-+|+|. |..+...+..+ +.+|+++|.++..++.+++..... +.....+..++.-.-..+|+|+..-.....
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~-Ga~V~~~d~~~~~l~~~~~~~g~~-~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~ 244 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGM-GATVTVLDINIDKLRQLDAEFCGR-IHTRYSSAYELEGAVKRADLVIGAVLVPGA 244 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTTS-SEEEECCHHHHHHHHHHCSEEEECCCCTTS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhcCCe-eEeccCCHHHHHHHHcCCCEEEECCCcCCC
Confidence 578999999963 55555555554 569999999999888877643321 211111111110001247999874322211
Q ss_pred CCHHHHHHHHHHhcccCcEEEEEc
Q 019479 192 PDPQRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 192 ~d~~~~l~~~~~~LkpgG~l~i~~ 215 (340)
..+.-+.++..+.+||||+++.+.
T Consensus 245 ~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 245 KAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCcceecHHHHhcCCCCcEEEEEe
Confidence 111122456778899999886553
No 394
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=92.02 E-value=3.6 Score=34.17 Aligned_cols=138 Identities=10% Similarity=0.065 Sum_probs=73.1
Q ss_pred CCCEEEEEcCccchHHHHHHHhC--CCceEEEEeCCHHHHHHHHHhCCCCCc-EEEEcCCC-CCCCCCCCccEEEecCcc
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHV--DAKNVTILDQSPHQLAKAKQKEPLKEC-TIIEGDAE-DLPFPTDYADRYVSAGSI 188 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~--~~~~v~g~D~s~~~~~~a~~~~~~~~i-~~~~~d~~-~~~~~~~~fD~v~~~~~l 188 (340)
.+++||-.|+ +|..+..+++.+ .+.+|++++.++...+.... .++ .++.+|+. .+...-+..|+|+.+...
T Consensus 20 ~~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~ 94 (236)
T 3e8x_A 20 QGMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE----RGASDIVVANLEEDFSHAFASIDAVVFAAGS 94 (236)
T ss_dssp -CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----TTCSEEEECCTTSCCGGGGTTCSEEEECCCC
T ss_pred CCCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh----CCCceEEEcccHHHHHHHHcCCCEEEECCCC
Confidence 5788998876 344444333332 37899999998877665543 367 88999986 222122368999987766
Q ss_pred cccCCHHHH-------HHHHHHhcc--cCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEE
Q 019479 189 EYWPDPQRG-------IKEAYRVLK--IGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKR 256 (340)
Q Consensus 189 ~~~~d~~~~-------l~~~~~~Lk--pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~ 256 (340)
....++... ...+.+.++ ..++++.+............ ........+....++++++.|+...-+..
T Consensus 95 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~-~~~~~Y~~sK~~~e~~~~~~gi~~~~lrp 170 (236)
T 3e8x_A 95 GPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQGP-MNMRHYLVAKRLADDELKRSSLDYTIVRP 170 (236)
T ss_dssp CTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGGGSC-GGGHHHHHHHHHHHHHHHHSSSEEEEEEE
T ss_pred CCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCh-hhhhhHHHHHHHHHHHHHHCCCCEEEEeC
Confidence 554444322 122222222 23667665432211110000 00000011344566677888887655444
No 395
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=91.73 E-value=0.95 Score=41.85 Aligned_cols=91 Identities=21% Similarity=0.238 Sum_probs=60.9
Q ss_pred CCEEEEEcCcc-chHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC----CCCCCccEEEecCcc
Q 019479 114 NMRVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP----FPTDYADRYVSAGSI 188 (340)
Q Consensus 114 ~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~----~~~~~fD~v~~~~~l 188 (340)
..+|+-+|+|. |......+.. .+..|+++|.+++.++.+++ .++.++.+|..+.. ..-..+|+|++..
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~-~g~~vvvId~d~~~v~~~~~----~g~~vi~GDat~~~~L~~agi~~A~~viv~~-- 76 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLS-SGVKMVVLDHDPDHIETLRK----FGMKVFYGDATRMDLLESAGAAKAEVLINAI-- 76 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-TTCCEEEEECCHHHHHHHHH----TTCCCEESCTTCHHHHHHTTTTTCSEEEECC--
T ss_pred CCeEEEECCCHHHHHHHHHHHH-CCCCEEEEECCHHHHHHHHh----CCCeEEEcCCCCHHHHHhcCCCccCEEEECC--
Confidence 45788899864 3333333333 37899999999999998875 34668899997632 2335689888742
Q ss_pred cccCCHH--HHHHHHHHhcccCcEEEEE
Q 019479 189 EYWPDPQ--RGIKEAYRVLKIGGKACVI 214 (340)
Q Consensus 189 ~~~~d~~--~~l~~~~~~LkpgG~l~i~ 214 (340)
++.. ..+....+.+.|...++..
T Consensus 77 ---~~~~~n~~i~~~ar~~~p~~~Iiar 101 (413)
T 3l9w_A 77 ---DDPQTNLQLTEMVKEHFPHLQIIAR 101 (413)
T ss_dssp ---SSHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred ---CChHHHHHHHHHHHHhCCCCeEEEE
Confidence 3443 3455666777888777765
No 396
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=91.55 E-value=3.2 Score=35.52 Aligned_cols=72 Identities=13% Similarity=0.171 Sum_probs=52.3
Q ss_pred CEEEEEcCccchHHHHHHHhC--CCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCcccccC
Q 019479 115 MRVVDVGGGTGFTTLGIVKHV--DAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEYWP 192 (340)
Q Consensus 115 ~~vLDiGcG~G~~~~~l~~~~--~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 192 (340)
++||-.|+ |..+..+++.+ .+.+|++++.++...+.... .+++++.+|+.++. -..+|+|+.........
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~D~~d~~--~~~~d~vi~~a~~~~~~ 77 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA----SGAEPLLWPGEEPS--LDGVTHLLISTAPDSGG 77 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH----TTEEEEESSSSCCC--CTTCCEEEECCCCBTTB
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh----CCCeEEEecccccc--cCCCCEEEECCCccccc
Confidence 68999995 77777666654 26799999998876655443 56899999998865 45689999876655443
Q ss_pred CH
Q 019479 193 DP 194 (340)
Q Consensus 193 d~ 194 (340)
++
T Consensus 78 ~~ 79 (286)
T 3ius_A 78 DP 79 (286)
T ss_dssp CH
T ss_pred cH
Confidence 33
No 397
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.51 E-value=0.12 Score=47.23 Aligned_cols=101 Identities=19% Similarity=0.192 Sum_probs=57.1
Q ss_pred CCCEEEEEcCc-cchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCccccc
Q 019479 113 RNMRVVDVGGG-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEYW 191 (340)
Q Consensus 113 ~~~~vLDiGcG-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 191 (340)
++++|+-+|+| .|..+...+... +.+|+++|.++...+.+.+.... .+.....+..++.-.-..+|+|+..-.....
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~-Ga~V~~~d~~~~~~~~~~~~~g~-~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~ 242 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGM-GAQVTILDVNHKRLQYLDDVFGG-RVITLTATEANIKKSVQHADLLIGAVLVPGA 242 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTT-SEEEEECCHHHHHHHHHHCSEEEECCC----
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHhcCc-eEEEecCCHHHHHHHHhCCCEEEECCCCCcc
Confidence 46899999996 344455555554 67999999999888777654332 1211111111111001257999875443211
Q ss_pred CCHHHHHHHHHHhcccCcEEEEEc
Q 019479 192 PDPQRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 192 ~d~~~~l~~~~~~LkpgG~l~i~~ 215 (340)
..+.-+.++..+.+|+||.++.+.
T Consensus 243 ~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 243 KAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp ---CCSCHHHHTTSCTTCEEEECC
T ss_pred ccchhHHHHHHHhhcCCCEEEEEe
Confidence 111123467778899999876654
No 398
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=91.47 E-value=0.53 Score=41.96 Aligned_cols=88 Identities=15% Similarity=-0.004 Sum_probs=54.8
Q ss_pred CCcEEEEcCCCC-CC-CCCCCccEEEecCccccc--------------CCHHHHHHHHHHhcccCcEEEEEccCC--Cch
Q 019479 160 KECTIIEGDAED-LP-FPTDYADRYVSAGSIEYW--------------PDPQRGIKEAYRVLKIGGKACVIGPVY--PTF 221 (340)
Q Consensus 160 ~~i~~~~~d~~~-~~-~~~~~fD~v~~~~~l~~~--------------~d~~~~l~~~~~~LkpgG~l~i~~~~~--~~~ 221 (340)
.+..++++|..+ +. +++++||+|++.--.... ......++++.++|||||.+++..... ...
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~ 92 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGV 92 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTE
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCC
Confidence 456788898754 33 457889999986444221 123578899999999999998874332 100
Q ss_pred hHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEE
Q 019479 222 WLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLK 255 (340)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~ 255 (340)
... .......+.++++++||......
T Consensus 93 ~~~--------~~~~~~~i~~~~~~~Gf~~~~~i 118 (323)
T 1boo_A 93 PAR--------SIYNFRVLIRMIDEVGFFLAEDF 118 (323)
T ss_dssp EEE--------CCHHHHHHHHHHHTTCCEEEEEE
T ss_pred ccc--------ccchHHHHHHHHHhCCCEEEEEE
Confidence 000 00112345567889999876543
No 399
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=91.32 E-value=0.67 Score=40.29 Aligned_cols=101 Identities=16% Similarity=0.127 Sum_probs=68.9
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC----------CCCCCc
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP----------FPTDYA 179 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~----------~~~~~f 179 (340)
+++.+|--|++.|. .+..|++. |.+|+.+|.+++.++.+.+... .++.++.+|+.+.. -.-+..
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~--Ga~V~i~~r~~~~l~~~~~~~g-~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 104 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAE--GARVFITGRRKDVLDAAIAEIG-GGAVGIQADSANLAELDRLYEKVKAEAGRI 104 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHC-TTCEEEECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHcC-CCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 67888888887773 45556665 8999999999998887765543 45677888986532 012568
Q ss_pred cEEEecCcccccC--------CHH-----------HHHHHHHHhcccCcEEEEEcc
Q 019479 180 DRYVSAGSIEYWP--------DPQ-----------RGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 180 D~v~~~~~l~~~~--------d~~-----------~~l~~~~~~LkpgG~l~i~~~ 216 (340)
|+++.+-...... +++ ...+.+.+.|+.+|.++.+..
T Consensus 105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS 160 (273)
T 4fgs_A 105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGS 160 (273)
T ss_dssp EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECC
T ss_pred CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEee
Confidence 9988776543321 111 345667778888888877643
No 400
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=90.42 E-value=0.14 Score=46.65 Aligned_cols=101 Identities=15% Similarity=0.171 Sum_probs=59.2
Q ss_pred CCCEEEEEcCc-cchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCccccc
Q 019479 113 RNMRVVDVGGG-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEYW 191 (340)
Q Consensus 113 ~~~~vLDiGcG-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 191 (340)
++.+|+-+|+| .|..+..++... +.+|+++|.+++..+.+++... ..+.....+..++.-.-..+|+|+........
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~-Ga~V~v~dr~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~ 243 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGL-GAQVQIFDINVERLSYLETLFG-SRVELLYSNSAEIETAVAEADLLIGAVLVPGR 243 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHG-GGSEEEECCHHHHHHHHHTCSEEEECCCCTTS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhhC-ceeEeeeCCHHHHHHHHcCCCEEEECCCcCCC
Confidence 45899999986 455566666665 5699999999988887765422 12222211111110011258999875543321
Q ss_pred CCHHHHHHHHHHhcccCcEEEEEc
Q 019479 192 PDPQRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 192 ~d~~~~l~~~~~~LkpgG~l~i~~ 215 (340)
..+.-+.++..+.++|||+++...
T Consensus 244 ~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 244 RAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp SCCCCBCHHHHTTSCTTCEEEETT
T ss_pred CCCeecCHHHHhhCCCCCEEEEEe
Confidence 111112355677899999887654
No 401
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=89.47 E-value=0.19 Score=45.92 Aligned_cols=97 Identities=14% Similarity=0.167 Sum_probs=59.1
Q ss_pred CCCEEEEEcCcc-chHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCC--C-------------------
Q 019479 113 RNMRVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDA--E------------------- 170 (340)
Q Consensus 113 ~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~--~------------------- 170 (340)
++.+|+-+|+|. |..+..++..+ +.+|+++|.++...+.+++. +.+++..+. .
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~l----Ga~~~~l~~~~~~~~gya~~~~~~~~~~~~~ 257 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL-GAKTTGYDVRPEVAEQVRSV----GAQWLDLGIDAAGEGGYARELSEAERAQQQQ 257 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSGGGHHHHHHT----TCEECCCC-------------CHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----CCeEEeccccccccccchhhhhHHHHhhhHH
Confidence 578999999984 66666666665 67999999999988888763 123322110 0
Q ss_pred CCCCCCCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEE
Q 019479 171 DLPFPTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVI 214 (340)
Q Consensus 171 ~~~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~ 214 (340)
.+.-.-...|+|+..-.+-.-..+.-+-+++.+.+|||+.++-+
T Consensus 258 ~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDv 301 (381)
T 3p2y_A 258 ALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDL 301 (381)
T ss_dssp HHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEET
T ss_pred HHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEE
Confidence 00001146899996532211111112347888899998877544
No 402
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=89.04 E-value=1.3 Score=41.98 Aligned_cols=90 Identities=19% Similarity=0.105 Sum_probs=59.2
Q ss_pred CCCCEEEEEcCc-cchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCcccc
Q 019479 112 DRNMRVVDVGGG-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEY 190 (340)
Q Consensus 112 ~~~~~vLDiGcG-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 190 (340)
..+++|+-+|+| .|......++.+ +.+|+++|.++...+.+++. +.++ .++.+. -...|+|+....-.+
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~-Ga~Viv~d~~~~~~~~A~~~----Ga~~--~~l~e~---l~~aDvVi~atgt~~ 341 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQ-GARVSVTEIDPINALQAMME----GFDV--VTVEEA---IGDADIVVTATGNKD 341 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHT----TCEE--CCHHHH---GGGCSEEEECSSSSC
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----CCEE--ecHHHH---HhCCCEEEECCCCHH
Confidence 478999999997 355555556655 67999999999887777643 2222 233221 135799998643333
Q ss_pred cCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 191 WPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 191 ~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
+-+ .+..+.||+||+++....
T Consensus 342 ~i~-----~~~l~~mk~ggilvnvG~ 362 (494)
T 3ce6_A 342 IIM-----LEHIKAMKDHAILGNIGH 362 (494)
T ss_dssp SBC-----HHHHHHSCTTCEEEECSS
T ss_pred HHH-----HHHHHhcCCCcEEEEeCC
Confidence 211 356778999999876654
No 403
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=88.77 E-value=4.6 Score=34.28 Aligned_cols=102 Identities=8% Similarity=0.064 Sum_probs=64.5
Q ss_pred CCCEEEEEcCc--cch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHh---CCCCCcEEEEcCCCCCCC----------
Q 019479 113 RNMRVVDVGGG--TGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKECTIIEGDAEDLPF---------- 174 (340)
Q Consensus 113 ~~~~vLDiGcG--~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~---~~~~~i~~~~~d~~~~~~---------- 174 (340)
.++++|-.|++ .|. .+..++++ +.+|+.++.++...+.+.+. ....++.++.+|+.+...
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEA--GARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE 83 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 57889999976 332 45556665 78999999887554444332 333468899999976320
Q ss_pred CCCCccEEEecCcccc-------c--CCHH--------------HHHHHHHHhcccCcEEEEEcc
Q 019479 175 PTDYADRYVSAGSIEY-------W--PDPQ--------------RGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 175 ~~~~fD~v~~~~~l~~-------~--~d~~--------------~~l~~~~~~LkpgG~l~i~~~ 216 (340)
..+..|+++.+..+.. + .+.+ .+++.+...++++|+++.+..
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 148 (266)
T 3oig_A 84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTY 148 (266)
T ss_dssp HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 0136899888765432 0 1111 245666777888898887643
No 404
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=88.65 E-value=0.28 Score=45.18 Aligned_cols=97 Identities=15% Similarity=0.243 Sum_probs=59.4
Q ss_pred CCCEEEEEcCcc-chHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCC-------------CCCC----
Q 019479 113 RNMRVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAE-------------DLPF---- 174 (340)
Q Consensus 113 ~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~-------------~~~~---- 174 (340)
++.+|+-+|+|. |..+..++..+ +.+|+++|.++...+.+++. . .++...+.. +++.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~~-G---~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~ 263 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL-GAVVSATDVRPAAKEQVASL-G---AKFIAVEDEEFKAAETAGGYAKEMSGEYQV 263 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSTTHHHHHHHT-T---CEECCCCC-----------------CHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHc-C---Cceeecccccccccccccchhhhcchhhhh
Confidence 578999999984 66666667765 67999999999888888763 1 222221110 0000
Q ss_pred --------CCCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEE
Q 019479 175 --------PTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVI 214 (340)
Q Consensus 175 --------~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~ 214 (340)
.-...|+||..-.+..-..+.-+-+++.+.+|||..++-.
T Consensus 264 ~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDv 311 (405)
T 4dio_A 264 KQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDL 311 (405)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEET
T ss_pred hhHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEE
Confidence 0135799986432221112222346888999999887654
No 405
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=88.64 E-value=4.3 Score=34.58 Aligned_cols=102 Identities=17% Similarity=0.191 Sum_probs=63.6
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC-----CC-----CCCc
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP-----FP-----TDYA 179 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~-----~~-----~~~f 179 (340)
.++++|-.|++.|. .+..+++. +.+|++++.+++..+...+... .++.++.+|+.+.. +. -+..
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 81 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFARE--GASLVAVDREERLLAEAVAALE-AEAIAVVADVSDPKAVEAVFAEALEEFGRL 81 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCC-SSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhc-CceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 46788888876542 34444444 7899999999887776665543 56788899986532 00 1357
Q ss_pred cEEEecCcccccC-----CH---H-----------HHHHHHHHhcccCcEEEEEccC
Q 019479 180 DRYVSAGSIEYWP-----DP---Q-----------RGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 180 D~v~~~~~l~~~~-----d~---~-----------~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
|+++.+....... +. + .+.+.+.+.++.+|+++.+...
T Consensus 82 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~ 138 (263)
T 2a4k_A 82 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSV 138 (263)
T ss_dssp CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCC
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecc
Confidence 9999876553321 11 1 2344555556447888777544
No 406
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=88.33 E-value=3 Score=36.28 Aligned_cols=102 Identities=13% Similarity=0.051 Sum_probs=63.6
Q ss_pred CCCEEEEEcCccc-----hHHHHHHHhCCCceEEEEeCCHHHHHHHHHhC-CCCCcEEEEcCCCCCC-----C-----CC
Q 019479 113 RNMRVVDVGGGTG-----FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKE-PLKECTIIEGDAEDLP-----F-----PT 176 (340)
Q Consensus 113 ~~~~vLDiGcG~G-----~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~-~~~~i~~~~~d~~~~~-----~-----~~ 176 (340)
.++++|-.|++.| ..+..+++. +.+|+.++.++...+.+.+.. ...++.++.+|+.+.. + .-
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREA--GAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHT--TCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 5788999997632 245555665 789999999875444443321 1135788899996632 0 11
Q ss_pred CCccEEEecCcccc-------c--CCHH--------------HHHHHHHHhcccCcEEEEEcc
Q 019479 177 DYADRYVSAGSIEY-------W--PDPQ--------------RGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 177 ~~fD~v~~~~~l~~-------~--~d~~--------------~~l~~~~~~LkpgG~l~i~~~ 216 (340)
+..|+++.+..+.. + .+.+ .+.+.+.+.++.+|+++.+..
T Consensus 108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS 170 (293)
T 3grk_A 108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY 170 (293)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 46899998766542 0 1111 345666777788898887643
No 407
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=88.15 E-value=2.9 Score=35.48 Aligned_cols=74 Identities=14% Similarity=0.116 Sum_probs=50.4
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC-----C-----CCCCc
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP-----F-----PTDYA 179 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~-----~-----~~~~f 179 (340)
.++++|-.|++.|. .+..++++ +.+|+.+|.+++..+...+... .++.++.+|+.+.. + .-+..
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 83 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVRE--GATVAIADIDIERARQAAAEIG-PAAYAVQMDVTRQDSIDAAIAATVEHAGGL 83 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHC-TTEEEEECCTTCHHHHHHHHHHHHHHSSSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhC-CCceEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 56788888876552 34455555 7899999999887776655443 46788899996532 0 11368
Q ss_pred cEEEecCccc
Q 019479 180 DRYVSAGSIE 189 (340)
Q Consensus 180 D~v~~~~~l~ 189 (340)
|+++.+....
T Consensus 84 d~lv~~Ag~~ 93 (259)
T 4e6p_A 84 DILVNNAALF 93 (259)
T ss_dssp CEEEECCCCC
T ss_pred CEEEECCCcC
Confidence 9999876653
No 408
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=88.02 E-value=0.39 Score=44.01 Aligned_cols=42 Identities=19% Similarity=0.277 Sum_probs=33.3
Q ss_pred CCCEEEEEcCc-cchHHHHHHHhCCCceEEEEeCCHHHHHHHHH
Q 019479 113 RNMRVVDVGGG-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQ 155 (340)
Q Consensus 113 ~~~~vLDiGcG-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~ 155 (340)
++.+|+-+|+| .|..+..+++.+ +.+|+++|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL-GAVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH
Confidence 68899999998 466666777776 5689999999887777765
No 409
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=87.78 E-value=3.3 Score=35.60 Aligned_cols=102 Identities=17% Similarity=0.210 Sum_probs=63.8
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCC------------HHHHHHHHHh--CCCCCcEEEEcCCCCCC--
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQS------------PHQLAKAKQK--EPLKECTIIEGDAEDLP-- 173 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s------------~~~~~~a~~~--~~~~~i~~~~~d~~~~~-- 173 (340)
.+++||-.|++.|. .+..++++ +.+|+.+|.+ ...++.+... ....++.++.+|+.+..
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEE--GADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence 57889888887653 34455555 7899999987 5444444322 12356888999997632
Q ss_pred ---C-----CCCCccEEEecCcccccC------CHH-----------HHHHHHHHhcccCcEEEEEcc
Q 019479 174 ---F-----PTDYADRYVSAGSIEYWP------DPQ-----------RGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 174 ---~-----~~~~fD~v~~~~~l~~~~------d~~-----------~~l~~~~~~LkpgG~l~i~~~ 216 (340)
+ .-+..|+++.+....... +++ .+++.+.+.++.+|+++.+..
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 154 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGS 154 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEecc
Confidence 0 013689999876653321 111 345666777778898877643
No 410
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=87.67 E-value=1.8 Score=39.12 Aligned_cols=121 Identities=10% Similarity=0.028 Sum_probs=70.6
Q ss_pred CCCEEEEEcCcc-c-hHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCcccc
Q 019479 113 RNMRVVDVGGGT-G-FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEY 190 (340)
Q Consensus 113 ~~~~vLDiGcG~-G-~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 190 (340)
...+|.=||+|. | .++..+++. +.+|++.|.+++.++.+.+. ++.. ..+..+.--.....|+|++.-.-.
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~--G~~V~v~dr~~~~~~~l~~~----g~~~-~~s~~e~~~~a~~~DvVi~~vp~~- 92 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKG--GHECVVYDLNVNAVQALERE----GIAG-ARSIEEFCAKLVKPRVVWLMVPAA- 92 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTT----TCBC-CSSHHHHHHHSCSSCEEEECSCGG-
T ss_pred cCCEEEEECchHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHC----CCEE-eCCHHHHHhcCCCCCEEEEeCCHH-
Confidence 457899999874 2 234445554 68999999999888777643 2211 112221100112359998754332
Q ss_pred cCCHHHHHHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHHHHHHHHHCCCcEEEEEEeC
Q 019479 191 WPDPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEEYIEWFQKAGFKDVKLKRIG 258 (340)
Q Consensus 191 ~~d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~ 258 (340)
....+++++...|++|..++-.....+. +..++.+.+.+.|...+..-..+
T Consensus 93 --~v~~vl~~l~~~l~~g~iiId~st~~~~---------------~~~~~~~~l~~~g~~~vdapVsG 143 (358)
T 4e21_A 93 --VVDSMLQRMTPLLAANDIVIDGGNSHYQ---------------DDIRRADQMRAQGITYVDVGTSG 143 (358)
T ss_dssp --GHHHHHHHHGGGCCTTCEEEECSSCCHH---------------HHHHHHHHHHTTTCEEEEEEEEC
T ss_pred --HHHHHHHHHHhhCCCCCEEEeCCCCChH---------------HHHHHHHHHHHCCCEEEeCCCCC
Confidence 4457788888889887665443332211 23445566777788766654433
No 411
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=87.66 E-value=5.5 Score=32.93 Aligned_cols=71 Identities=11% Similarity=0.043 Sum_probs=47.3
Q ss_pred EEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC-------CCCCCccEEEec
Q 019479 116 RVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP-------FPTDYADRYVSA 185 (340)
Q Consensus 116 ~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~-------~~~~~fD~v~~~ 185 (340)
+||-.|++.|. .+..++++ +.+|+.+|.+++.++.+.+.. ..++.++..|+.+.. .....+|+++.+
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~ 79 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAE--GKATYLTGRSESKLSTVTNCL-SNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHS 79 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHTC-SSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEEC
T ss_pred EEEEecCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHH-hhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEe
Confidence 57777776542 33444444 789999999998888777655 356788889986521 112345999877
Q ss_pred Cccc
Q 019479 186 GSIE 189 (340)
Q Consensus 186 ~~l~ 189 (340)
....
T Consensus 80 Ag~~ 83 (230)
T 3guy_A 80 AGSG 83 (230)
T ss_dssp CCCC
T ss_pred CCcC
Confidence 6544
No 412
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=87.33 E-value=3.6 Score=34.49 Aligned_cols=75 Identities=16% Similarity=0.089 Sum_probs=50.0
Q ss_pred CCCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC------CCCCCccEE
Q 019479 112 DRNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP------FPTDYADRY 182 (340)
Q Consensus 112 ~~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~------~~~~~fD~v 182 (340)
.++++||-.|++.|. .+..++++ +.+|+++|.++..++...+... .++.+...|+.+.. ...+..|++
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~id~l 88 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKL--GSKVIISGSNEEKLKSLGNALK-DNYTIEVCNLANKEECSNLISKTSNLDIL 88 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHC-SSEEEEECCTTSHHHHHHHHHTCSCCSEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHhc-cCccEEEcCCCCHHHHHHHHHhcCCCCEE
Confidence 367889888876552 34444444 7899999999988777665443 46788888886521 112468999
Q ss_pred EecCccc
Q 019479 183 VSAGSIE 189 (340)
Q Consensus 183 ~~~~~l~ 189 (340)
+.+....
T Consensus 89 i~~Ag~~ 95 (249)
T 3f9i_A 89 VCNAGIT 95 (249)
T ss_dssp EECCC--
T ss_pred EECCCCC
Confidence 9876543
No 413
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=87.30 E-value=2.1 Score=33.25 Aligned_cols=97 Identities=13% Similarity=0.089 Sum_probs=53.7
Q ss_pred CCCCEEEEEcCcc-chHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC----CCCCCccEEEecC
Q 019479 112 DRNMRVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP----FPTDYADRYVSAG 186 (340)
Q Consensus 112 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~----~~~~~fD~v~~~~ 186 (340)
..+.+|+-+|+|. |......+.. .+.+|+++|.+++.++.+++ ..+..++.+|..+.. ..-..+|+|+...
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~-~g~~V~vid~~~~~~~~~~~---~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~ 92 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASS-SGHSVVVVDKNEYAFHRLNS---EFSGFTVVGDAAEFETLKECGMEKADMVFAFT 92 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESCGGGGGGSCT---TCCSEEEESCTTSHHHHHTTTGGGCSEEEECS
T ss_pred cCCCcEEEECCCHHHHHHHHHHHh-CCCeEEEEECCHHHHHHHHh---cCCCcEEEecCCCHHHHHHcCcccCCEEEEEe
Confidence 4678999999864 4433333333 26799999998876554431 234566667764311 1123589888753
Q ss_pred cccccCCHHHHHHHHHHhcccCcEEEEEc
Q 019479 187 SIEYWPDPQRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 187 ~l~~~~d~~~~l~~~~~~LkpgG~l~i~~ 215 (340)
.- +.....+..+.+.+.+...++...
T Consensus 93 ~~---~~~~~~~~~~~~~~~~~~~iv~~~ 118 (155)
T 2g1u_A 93 ND---DSTNFFISMNARYMFNVENVIARV 118 (155)
T ss_dssp SC---HHHHHHHHHHHHHTSCCSEEEEEC
T ss_pred CC---cHHHHHHHHHHHHHCCCCeEEEEE
Confidence 21 111233344445455555655543
No 414
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=87.13 E-value=0.33 Score=44.75 Aligned_cols=98 Identities=18% Similarity=0.263 Sum_probs=57.8
Q ss_pred CCCEEEEEcCc-cchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCC---------------------
Q 019479 113 RNMRVVDVGGG-TGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAE--------------------- 170 (340)
Q Consensus 113 ~~~~vLDiGcG-~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~--------------------- 170 (340)
++.+|+-+|+| .|..+..+++.+ +.+|+++|.++...+.+++. . .++...|..
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~v~D~~~~~~~~~~~l-G---a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 245 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSL-GAIVRAFDTRPEVKEQVQSM-G---AEFLELDFKEEAGSGDGYAKVMSDAFIKAE 245 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCGGGHHHHHHT-T---CEECCC--------CCHHHHHHSHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHc-C---CEEEEecccccccccccchhhccHHHHHHH
Confidence 57899999998 466666777776 57999999999888777543 2 222211110
Q ss_pred --CCCCCCCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEc
Q 019479 171 --DLPFPTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 171 --~~~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~ 215 (340)
.+.-.-...|+|+..-.+-.-..+.-+-++..+.+||||+++-+.
T Consensus 246 ~~~l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva 292 (401)
T 1x13_A 246 MELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLA 292 (401)
T ss_dssp HHHHHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEc
Confidence 010001247999875222111111112256778899999887653
No 415
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=87.04 E-value=2 Score=37.06 Aligned_cols=75 Identities=15% Similarity=0.100 Sum_probs=51.1
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC-----C-----CCCCc
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP-----F-----PTDYA 179 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~-----~-----~~~~f 179 (340)
.++++|-.|++.|. .+..+++. +.+|+.+|.+++..+.+.+.. ..++.++.+|+.+.. + .-+..
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 104 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADE--GCHVLCADIDGDAADAAATKI-GCGAAACRVDVSDEQQIIAMVDACVAAFGGV 104 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHH-CSSCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHc-CCcceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 56788888876653 34555555 789999999988777665544 256788899997632 0 01368
Q ss_pred cEEEecCcccc
Q 019479 180 DRYVSAGSIEY 190 (340)
Q Consensus 180 D~v~~~~~l~~ 190 (340)
|+++.+.....
T Consensus 105 D~lvnnAg~~~ 115 (277)
T 3gvc_A 105 DKLVANAGVVH 115 (277)
T ss_dssp CEEEECCCCCC
T ss_pred CEEEECCCCCC
Confidence 99998766543
No 416
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=87.03 E-value=5.1 Score=30.81 Aligned_cols=96 Identities=11% Similarity=0.170 Sum_probs=56.0
Q ss_pred CCEEEEEcCccchHHHHHHHhC--CCceEEEEeCC-HHHHHHHHHhCCCCCcEEEEcCCCCCC----CCCCCccEEEecC
Q 019479 114 NMRVVDVGGGTGFTTLGIVKHV--DAKNVTILDQS-PHQLAKAKQKEPLKECTIIEGDAEDLP----FPTDYADRYVSAG 186 (340)
Q Consensus 114 ~~~vLDiGcG~G~~~~~l~~~~--~~~~v~g~D~s-~~~~~~a~~~~~~~~i~~~~~d~~~~~----~~~~~fD~v~~~~ 186 (340)
..+|+-+|+| ..+..+++.+ .+.+|+++|.+ ++.++...+... .++.++.+|..+.. ..-..+|+|++..
T Consensus 3 ~~~vlI~G~G--~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (153)
T 1id1_A 3 KDHFIVCGHS--ILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-DNADVIPGDSNDSSVLKKAGIDRCRAILALS 79 (153)
T ss_dssp CSCEEEECCS--HHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-TTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred CCcEEEECCC--HHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc-CCCeEEEcCCCCHHHHHHcChhhCCEEEEec
Confidence 4578888875 4444444332 26899999997 454444433211 45788999986521 1234689888743
Q ss_pred cccccCCHHHHHHHHHHhcccCcEEEEEc
Q 019479 187 SIEYWPDPQRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 187 ~l~~~~d~~~~l~~~~~~LkpgG~l~i~~ 215 (340)
.-. .....+....+.+.|..+++...
T Consensus 80 ~~d---~~n~~~~~~a~~~~~~~~ii~~~ 105 (153)
T 1id1_A 80 DND---ADNAFVVLSAKDMSSDVKTVLAV 105 (153)
T ss_dssp SCH---HHHHHHHHHHHHHTSSSCEEEEC
T ss_pred CCh---HHHHHHHHHHHHHCCCCEEEEEE
Confidence 211 11244555666676777776653
No 417
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=87.01 E-value=6.3 Score=34.35 Aligned_cols=87 Identities=16% Similarity=0.141 Sum_probs=53.2
Q ss_pred CCEEEEEcCcc-c-hHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCccccc
Q 019479 114 NMRVVDVGGGT-G-FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEYW 191 (340)
Q Consensus 114 ~~~vLDiGcG~-G-~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 191 (340)
..+|.-||+|. | .++..+++. +.+|++.|.+++.++.+.+. +......+..+. -...|+|+.. +
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~----g~~~~~~~~~e~---~~~aDvvi~~-----v 72 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRA--GLSTWGADLNPQACANLLAE----GACGAAASAREF---AGVVDALVIL-----V 72 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT----TCSEEESSSTTT---TTTCSEEEEC-----C
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHc----CCccccCCHHHH---HhcCCEEEEE-----C
Confidence 46788999874 2 234444544 78999999999888877654 222224444432 2346999874 4
Q ss_pred CCHH---HHH---HHHHHhcccCcEEEEE
Q 019479 192 PDPQ---RGI---KEAYRVLKIGGKACVI 214 (340)
Q Consensus 192 ~d~~---~~l---~~~~~~LkpgG~l~i~ 214 (340)
++.. .++ +++...+++|..++-.
T Consensus 73 p~~~~~~~v~~~~~~l~~~l~~g~ivv~~ 101 (303)
T 3g0o_A 73 VNAAQVRQVLFGEDGVAHLMKPGSAVMVS 101 (303)
T ss_dssp SSHHHHHHHHC--CCCGGGSCTTCEEEEC
T ss_pred CCHHHHHHHHhChhhHHhhCCCCCEEEec
Confidence 4432 333 4556777877665433
No 418
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=86.99 E-value=4 Score=34.67 Aligned_cols=75 Identities=17% Similarity=0.227 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCCCC-----C-----C
Q 019479 113 RNMRVVDVGG-GTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAEDLP-----F-----P 175 (340)
Q Consensus 113 ~~~~vLDiGc-G~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~~~-----~-----~ 175 (340)
.+++||-.|+ |.|. .+..++++ +.+|+.+|.++...+.+.+.. ...++.++.+|+.+.. + .
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLE--GADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 5788998887 5543 45555665 789999999987776655442 2257889999997632 0 0
Q ss_pred CCCccEEEecCccc
Q 019479 176 TDYADRYVSAGSIE 189 (340)
Q Consensus 176 ~~~fD~v~~~~~l~ 189 (340)
.+..|+++.+..+.
T Consensus 99 ~g~id~li~~Ag~~ 112 (266)
T 3o38_A 99 AGRLDVLVNNAGLG 112 (266)
T ss_dssp HSCCCEEEECCCCC
T ss_pred hCCCcEEEECCCcC
Confidence 13689999876654
No 419
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=86.99 E-value=9.6 Score=31.94 Aligned_cols=103 Identities=18% Similarity=0.118 Sum_probs=60.3
Q ss_pred CCCEEEEEcCccchHHHHHHHhC--CCce-EEEEeCCH--HHHHHHHHhCCCCCcEEEEcCCCCC-C-----CC-----C
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHV--DAKN-VTILDQSP--HQLAKAKQKEPLKECTIIEGDAEDL-P-----FP-----T 176 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~--~~~~-v~g~D~s~--~~~~~a~~~~~~~~i~~~~~d~~~~-~-----~~-----~ 176 (340)
.+++||-.|++ |..+..+++.+ .+.+ |+.++.++ +.++...+.....++.++.+|+.+. . +. -
T Consensus 4 ~~k~vlVtGas-~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (254)
T 1sby_A 4 TNKNVIFVAAL-GGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL 82 (254)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCC-ChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc
Confidence 46788888865 44444444432 2565 88888875 3444444333334678889998763 1 00 1
Q ss_pred CCccEEEecCcccccCCHH-----------HHHHHHHHhccc-----CcEEEEEcc
Q 019479 177 DYADRYVSAGSIEYWPDPQ-----------RGIKEAYRVLKI-----GGKACVIGP 216 (340)
Q Consensus 177 ~~fD~v~~~~~l~~~~d~~-----------~~l~~~~~~Lkp-----gG~l~i~~~ 216 (340)
+..|+++.+.......+++ .+++.+.+.++. +|+++.+..
T Consensus 83 g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS 138 (254)
T 1sby_A 83 KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICS 138 (254)
T ss_dssp SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred CCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECc
Confidence 3689999877665555554 234445555532 577776643
No 420
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=86.74 E-value=2.8 Score=35.74 Aligned_cols=102 Identities=14% Similarity=0.156 Sum_probs=62.1
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC----CCCcEEEEcCCCCCC-----CC-----
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----LKECTIIEGDAEDLP-----FP----- 175 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~----~~~i~~~~~d~~~~~-----~~----- 175 (340)
.+++||-.|++.|. .+..+++. +.+|+++|.+++..+.+.+... ..++.++.+|+.+.. +.
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLK--GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH 83 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence 46788888876542 34444444 7899999998876655433321 235788889986532 00
Q ss_pred CCCccEEEecCcccccCCHHH-----------HHHHHHHhccc-----CcEEEEEcc
Q 019479 176 TDYADRYVSAGSIEYWPDPQR-----------GIKEAYRVLKI-----GGKACVIGP 216 (340)
Q Consensus 176 ~~~fD~v~~~~~l~~~~d~~~-----------~l~~~~~~Lkp-----gG~l~i~~~ 216 (340)
-+..|+++.+.......+++. ..+.+.+.++. +|+++.+..
T Consensus 84 ~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS 140 (267)
T 2gdz_A 84 FGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSS 140 (267)
T ss_dssp HSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred cCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCC
Confidence 135799998876655555542 23445555543 577776643
No 421
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=85.95 E-value=15 Score=37.89 Aligned_cols=127 Identities=9% Similarity=0.045 Sum_probs=75.3
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCc--eEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCC------------CC---CC-
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAK--NVTILDQSPHQLAKAKQKEPLKECTIIEGDAE------------DL---PF- 174 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~--~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~------------~~---~~- 174 (340)
...+++|+-||.|.++.-+.+. |. .+.++|+++.+++.-+.+. ++..++.+|+. +. .+
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~A--G~~~vv~avEid~~A~~ty~~N~--p~~~~~~~DI~~l~~~~~~~di~~~~~~~lp 614 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQA--GISDTLWAIEMWDPAAQAFRLNN--PGSTVFTEDCNILLKLVMAGETTNSRGQRLP 614 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHH--TSEEEEEEECSSHHHHHHHHHHC--TTSEEECSCHHHHHHHHHHTCSBCTTCCBCC
T ss_pred CCCeEEEeccCccHHHHHHHHC--CCCceEEEEECCHHHHHHHHHhC--CCCccccccHHHHhhhccchhhhhhhhhhcc
Confidence 4568999999999999998877 64 5779999999998888765 34455555532 11 11
Q ss_pred CCCCccEEEecCcccccC-----------CHH-HH---HHHHHHhcccCcEEEEEccCCCchhHhhHhhhHhhcCCCHHH
Q 019479 175 PTDYADRYVSAGSIEYWP-----------DPQ-RG---IKEAYRVLKIGGKACVIGPVYPTFWLSRFFADVWMLFPKEEE 239 (340)
Q Consensus 175 ~~~~fD~v~~~~~l~~~~-----------d~~-~~---l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (340)
..+.+|+|+...-...+. |.. .+ +-++.+.++|. +++.+.+..-..... -...+.
T Consensus 615 ~~~~vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~~~~~riv~~~rPk--~~llENV~glls~~~--------~~~~~~ 684 (1002)
T 3swr_A 615 QKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPR--FFLLENVRNFVSFKR--------SMVLKL 684 (1002)
T ss_dssp CTTTCSEEEECCCCTTCCSSSCCCHHHHHHHTTSHHHHHHHHHHHHCCS--EEEEEEEGGGGTTGG--------GHHHHH
T ss_pred cCCCeeEEEEcCCCcchhhhCCCCCCcccchhhHHHHHHHHHHHHhCCC--EEEEeccHHHhccCc--------chHHHH
Confidence 134689999754433331 110 12 23344556663 444443322110000 012456
Q ss_pred HHHHHHHCCCcEEE
Q 019479 240 YIEWFQKAGFKDVK 253 (340)
Q Consensus 240 ~~~~l~~aGF~~v~ 253 (340)
+.+.|++.||.+..
T Consensus 685 i~~~L~~lGY~v~~ 698 (1002)
T 3swr_A 685 TLRCLVRMGYQCTF 698 (1002)
T ss_dssp HHHHHHHHTCEEEE
T ss_pred HHHHHHhcCCeEEE
Confidence 77788999998643
No 422
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=85.74 E-value=0.27 Score=44.29 Aligned_cols=93 Identities=15% Similarity=0.149 Sum_probs=56.7
Q ss_pred CCCCCEEEEEcC--ccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCC-----CCCCCCccEEE
Q 019479 111 FDRNMRVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDL-----PFPTDYADRYV 183 (340)
Q Consensus 111 ~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~-----~~~~~~fD~v~ 183 (340)
.+++.+||-.|+ +.|..+..+++...+.+|++++ ++...+.++ . ... .++. +-.++ ....+.+|+|+
T Consensus 140 ~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~-ga~--~~~~-~~~~~~~~~~~~~~~g~Dvv~ 213 (349)
T 4a27_A 140 LREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-D-SVT--HLFD-RNADYVQEVKRISAEGVDIVL 213 (349)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-G-GSS--EEEE-TTSCHHHHHHHHCTTCEEEEE
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-c-CCc--EEEc-CCccHHHHHHHhcCCCceEEE
Confidence 357899999998 3578888888876567999998 566666665 2 211 1222 11111 01235699998
Q ss_pred ecCcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 184 SAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 184 ~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
-...- ..+..+.+.|++||++++...
T Consensus 214 d~~g~-------~~~~~~~~~l~~~G~~v~~G~ 239 (349)
T 4a27_A 214 DCLCG-------DNTGKGLSLLKPLGTYILYGS 239 (349)
T ss_dssp EECC--------------CTTEEEEEEEEEEC-
T ss_pred ECCCc-------hhHHHHHHHhhcCCEEEEECC
Confidence 64321 123678899999999998753
No 423
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=85.67 E-value=7.3 Score=31.96 Aligned_cols=89 Identities=18% Similarity=0.159 Sum_probs=55.6
Q ss_pred EEEEEcCccchHHHHHHHhC--CCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC----CCCCCccEEEecCccc
Q 019479 116 RVVDVGGGTGFTTLGIVKHV--DAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP----FPTDYADRYVSAGSIE 189 (340)
Q Consensus 116 ~vLDiGcG~G~~~~~l~~~~--~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~----~~~~~fD~v~~~~~l~ 189 (340)
+|+=+|+| .++..+++.+ .+.+|+++|.+++.++...+. .++.++.+|..+.. ..-..+|+|++..
T Consensus 2 ~iiIiG~G--~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~---~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~--- 73 (218)
T 3l4b_C 2 KVIIIGGE--TTAYYLARSMLSRKYGVVIINKDRELCEEFAKK---LKATIIHGDGSHKEILRDAEVSKNDVVVILT--- 73 (218)
T ss_dssp CEEEECCH--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH---SSSEEEESCTTSHHHHHHHTCCTTCEEEECC---
T ss_pred EEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---cCCeEEEcCCCCHHHHHhcCcccCCEEEEec---
Confidence 57778874 4554444432 368999999999988776543 24678899986522 1234689988742
Q ss_pred ccCCHH--HHHHHHHHhcccCcEEEEE
Q 019479 190 YWPDPQ--RGIKEAYRVLKIGGKACVI 214 (340)
Q Consensus 190 ~~~d~~--~~l~~~~~~LkpgG~l~i~ 214 (340)
++.. ..+....+.+.+..+++..
T Consensus 74 --~~d~~n~~~~~~a~~~~~~~~iia~ 98 (218)
T 3l4b_C 74 --PRDEVNLFIAQLVMKDFGVKRVVSL 98 (218)
T ss_dssp --SCHHHHHHHHHHHHHTSCCCEEEEC
T ss_pred --CCcHHHHHHHHHHHHHcCCCeEEEE
Confidence 2332 3445555656666666554
No 424
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=85.60 E-value=3 Score=35.47 Aligned_cols=102 Identities=11% Similarity=-0.009 Sum_probs=61.5
Q ss_pred CCCCEEEEEcCc-cchH----HHHHHHhCCCceEEEEeCCHHHHHHHHHh-CCCCCcEEEEcCCCCCC-----C-----C
Q 019479 112 DRNMRVVDVGGG-TGFT----TLGIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECTIIEGDAEDLP-----F-----P 175 (340)
Q Consensus 112 ~~~~~vLDiGcG-~G~~----~~~l~~~~~~~~v~g~D~s~~~~~~a~~~-~~~~~i~~~~~d~~~~~-----~-----~ 175 (340)
.++++||-.|++ +|.. +..++++ +.+|+.++.+....+.+++. ....++.++.+|+.+.. + .
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 89 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKRE--GAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTH 89 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHc--CCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence 368899999975 2333 3444444 78999999876544444332 11234788899997632 0 1
Q ss_pred CCCccEEEecCccccc----------CCHH--------------HHHHHHHHhcccCcEEEEEc
Q 019479 176 TDYADRYVSAGSIEYW----------PDPQ--------------RGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 176 ~~~fD~v~~~~~l~~~----------~d~~--------------~~l~~~~~~LkpgG~l~i~~ 215 (340)
-+..|+++.+..+... .+.+ .+++.+.+.++++|+++.+.
T Consensus 90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 90 WDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp CSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 1468999987655331 1111 34556666777788887764
No 425
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=85.57 E-value=6.8 Score=33.90 Aligned_cols=102 Identities=20% Similarity=0.255 Sum_probs=62.5
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHH-HHHHHHh--CCCCCcEEEEcCCCCCC-----C-----CC
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQ-LAKAKQK--EPLKECTIIEGDAEDLP-----F-----PT 176 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~-~~~a~~~--~~~~~i~~~~~d~~~~~-----~-----~~ 176 (340)
.+++||-.|++.|. .+..++++ +.+|+.+|.++.. .+...+. ....++.++.+|+.+.. + .-
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKE--GANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 57889988876653 34445554 7899999987642 3333222 22356888999997632 0 01
Q ss_pred CCccEEEecCccccc-C-----CH---H-----------HHHHHHHHhcccCcEEEEEcc
Q 019479 177 DYADRYVSAGSIEYW-P-----DP---Q-----------RGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 177 ~~fD~v~~~~~l~~~-~-----d~---~-----------~~l~~~~~~LkpgG~l~i~~~ 216 (340)
+..|+++.+-..... . +. + .+++.+.+.++.+|+++.+..
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS 183 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTAS 183 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECC
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEec
Confidence 368999977543321 1 11 1 345667777888898877643
No 426
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=85.49 E-value=3.7 Score=35.77 Aligned_cols=75 Identities=17% Similarity=0.136 Sum_probs=51.2
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhC--CCCCcEEEEcCCCCCC-----C-----CCC
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKE--PLKECTIIEGDAEDLP-----F-----PTD 177 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~--~~~~i~~~~~d~~~~~-----~-----~~~ 177 (340)
.+++||-.|++.|. .+..++++ +.+|+++|.++..++.+.+.. ...++.++..|+.+.. + ..+
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARR--GARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 57889988887652 34455554 789999999988777665442 2346888999997632 0 013
Q ss_pred CccEEEecCccc
Q 019479 178 YADRYVSAGSIE 189 (340)
Q Consensus 178 ~fD~v~~~~~l~ 189 (340)
..|+++.+..+.
T Consensus 108 ~id~lvnnAg~~ 119 (301)
T 3tjr_A 108 GVDVVFSNAGIV 119 (301)
T ss_dssp SCSEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 689999876654
No 427
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=85.25 E-value=4 Score=34.82 Aligned_cols=75 Identities=13% Similarity=0.136 Sum_probs=49.8
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCCCCCC----------C
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAEDLPFP----------T 176 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~~~~~----------~ 176 (340)
.+++||-.|++.|. .+..++++ +.+|+.+|.+++.++.+.+.. ...++.++.+|+.+.... -
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAA--GARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF 96 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 56788877776552 34444544 789999999987776655432 135688899999764310 1
Q ss_pred CCccEEEecCccc
Q 019479 177 DYADRYVSAGSIE 189 (340)
Q Consensus 177 ~~fD~v~~~~~l~ 189 (340)
+..|+++.+-...
T Consensus 97 g~id~lv~nAg~~ 109 (266)
T 4egf_A 97 GGLDVLVNNAGIS 109 (266)
T ss_dssp TSCSEEEEECCCC
T ss_pred CCCCEEEECCCcC
Confidence 3689999876544
No 428
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=85.11 E-value=4 Score=34.92 Aligned_cols=76 Identities=16% Similarity=0.138 Sum_probs=51.6
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhC--CCCCcEEEEcCCCCCC----------CCCC
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKE--PLKECTIIEGDAEDLP----------FPTD 177 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~--~~~~i~~~~~d~~~~~----------~~~~ 177 (340)
.++++|--|++.|. .+..+++. |.+|+.+|.+++.++.+.+.. ...++.++.+|+.+.. -.-+
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~--Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAA--GARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI 85 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 67888888877663 34555555 899999999998776665432 2246778888886521 1235
Q ss_pred CccEEEecCcccc
Q 019479 178 YADRYVSAGSIEY 190 (340)
Q Consensus 178 ~fD~v~~~~~l~~ 190 (340)
..|+++.+-.+..
T Consensus 86 ~iDiLVNNAG~~~ 98 (255)
T 4g81_D 86 HVDILINNAGIQY 98 (255)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCcEEEECCCCCC
Confidence 7899998765543
No 429
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=85.05 E-value=4 Score=34.69 Aligned_cols=102 Identities=11% Similarity=0.029 Sum_probs=64.6
Q ss_pred CCCEEEEEcCc----cch-HHHHHHHhCCCceEEEEeCCHHHHHHHHHh---CCCCCcEEEEcCCCCCC----------C
Q 019479 113 RNMRVVDVGGG----TGF-TTLGIVKHVDAKNVTILDQSPHQLAKAKQK---EPLKECTIIEGDAEDLP----------F 174 (340)
Q Consensus 113 ~~~~vLDiGcG----~G~-~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~---~~~~~i~~~~~d~~~~~----------~ 174 (340)
+++++|--|++ -|. .+..+++. |.+|+.+|.+++..+.+.+. ....++.++..|+.+.. -
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~--Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQL--GAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK 82 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 68899999853 343 45666666 89999999998777666544 23356888899986521 0
Q ss_pred CCCCccEEEecCcccccC---------CHH--------------HHHHHHHHhcccCcEEEEEcc
Q 019479 175 PTDYADRYVSAGSIEYWP---------DPQ--------------RGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 175 ~~~~fD~v~~~~~l~~~~---------d~~--------------~~l~~~~~~LkpgG~l~i~~~ 216 (340)
.-+..|+++.+-.+.... +.+ ...+.+...++.+|.++.+..
T Consensus 83 ~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS 147 (256)
T 4fs3_A 83 DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTY 147 (256)
T ss_dssp HHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEEC
T ss_pred HhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEec
Confidence 125689888765442211 111 122344566788899877643
No 430
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=84.81 E-value=3.6 Score=34.39 Aligned_cols=73 Identities=15% Similarity=0.244 Sum_probs=49.2
Q ss_pred CCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC-----C-----CCCCcc
Q 019479 114 NMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP-----F-----PTDYAD 180 (340)
Q Consensus 114 ~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~-----~-----~~~~fD 180 (340)
++++|-.|++.|. .+..++++ +.+|+.+|.+++.++...+... .++.++.+|+.+.. + ..+..|
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 79 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVER--GHQVSMMGRRYQRLQQQELLLG-NAVIGIVADLAHHEDVDVAFAAAVEWGGLPE 79 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHG-GGEEEEECCTTSHHHHHHHHHHHHHHHCSCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhc-CCceEEECCCCCHHHHHHHHHHHHHhcCCCc
Confidence 4678888876653 34445554 7899999999987776665443 35888999986532 0 013689
Q ss_pred EEEecCccc
Q 019479 181 RYVSAGSIE 189 (340)
Q Consensus 181 ~v~~~~~l~ 189 (340)
+++.+....
T Consensus 80 ~lvnnAg~~ 88 (235)
T 3l6e_A 80 LVLHCAGTG 88 (235)
T ss_dssp EEEEECCCC
T ss_pred EEEECCCCC
Confidence 998876553
No 431
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=84.80 E-value=4.9 Score=34.28 Aligned_cols=103 Identities=18% Similarity=0.238 Sum_probs=63.0
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCC-HHHHHHHHHhC--CCCCcEEEEcCCCCCC-----C-----CC
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQS-PHQLAKAKQKE--PLKECTIIEGDAEDLP-----F-----PT 176 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s-~~~~~~a~~~~--~~~~i~~~~~d~~~~~-----~-----~~ 176 (340)
.++++|-.|++.|. .+..+++. +.+|+.++.. ....+...+.. ...++.++.+|+.+.. + .-
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRL--GAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF 94 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 57788888876653 34445554 7899987763 44444333221 2356888999997632 0 01
Q ss_pred CCccEEEecCcccccC-----CH---H-----------HHHHHHHHhcccCcEEEEEccC
Q 019479 177 DYADRYVSAGSIEYWP-----DP---Q-----------RGIKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 177 ~~fD~v~~~~~l~~~~-----d~---~-----------~~l~~~~~~LkpgG~l~i~~~~ 217 (340)
+..|+++.+....... +. + .+.+.+.+.++++|+++.+...
T Consensus 95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~ 154 (270)
T 3is3_A 95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSN 154 (270)
T ss_dssp SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCT
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCc
Confidence 3689999776554321 11 1 3456777888889998887543
No 432
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=84.75 E-value=7.4 Score=34.27 Aligned_cols=91 Identities=13% Similarity=0.027 Sum_probs=58.2
Q ss_pred CCEEEEEcCcc--chHHHHHHHhCCCc--eEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCccc
Q 019479 114 NMRVVDVGGGT--GFTTLGIVKHVDAK--NVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIE 189 (340)
Q Consensus 114 ~~~vLDiGcG~--G~~~~~l~~~~~~~--~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~ 189 (340)
..+|.=||+|. +.++..+++. +. +|+++|.+++.++.+.+... +.-...|..+. .-...|+|+..--..
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~--G~~~~V~~~dr~~~~~~~a~~~G~---~~~~~~~~~~~--~~~~aDvVilavp~~ 105 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS--GFKGKIYGYDINPESISKAVDLGI---IDEGTTSIAKV--EDFSPDFVMLSSPVR 105 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHTTS---CSEEESCTTGG--GGGCCSEEEECSCGG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC--CCCCEEEEEECCHHHHHHHHHCCC---cchhcCCHHHH--hhccCCEEEEeCCHH
Confidence 36899999884 3345555554 55 89999999998888875421 11123343320 123479999864433
Q ss_pred ccCCHHHHHHHHHHhcccCcEEEEE
Q 019479 190 YWPDPQRGIKEAYRVLKIGGKACVI 214 (340)
Q Consensus 190 ~~~d~~~~l~~~~~~LkpgG~l~i~ 214 (340)
....+++++...+++|..++-.
T Consensus 106 ---~~~~vl~~l~~~l~~~~iv~d~ 127 (314)
T 3ggo_A 106 ---TFREIAKKLSYILSEDATVTDQ 127 (314)
T ss_dssp ---GHHHHHHHHHHHSCTTCEEEEC
T ss_pred ---HHHHHHHHHhhccCCCcEEEEC
Confidence 3357888999999988766543
No 433
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=84.36 E-value=6.4 Score=34.22 Aligned_cols=89 Identities=10% Similarity=0.047 Sum_probs=54.1
Q ss_pred CCCEEEEEcCcc-chHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEE-cCCCCCCCCCCCccEEEecCcccc
Q 019479 113 RNMRVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIE-GDAEDLPFPTDYADRYVSAGSIEY 190 (340)
Q Consensus 113 ~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~-~d~~~~~~~~~~fD~v~~~~~l~~ 190 (340)
.+++|+=||+|. |......+..+ +.+|+++|.++...+.+.+. +++... .++.+. -...|+|+.....+.
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~~~----g~~~~~~~~l~~~---l~~aDvVi~~~p~~~ 225 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAAL-GAKVKVGARESDLLARIAEM----GMEPFHISKAAQE---LRDVDVCINTIPALV 225 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT----TSEEEEGGGHHHH---TTTCSEEEECCSSCC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHC----CCeecChhhHHHH---hcCCCEEEECCChHH
Confidence 688999999874 44444444444 57999999998766555431 233321 122211 235899998765543
Q ss_pred cCCHHHHHHHHHHhcccCcEEEEEc
Q 019479 191 WPDPQRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 191 ~~d~~~~l~~~~~~LkpgG~l~i~~ 215 (340)
+ +. +..+.+|||+.++-..
T Consensus 226 i-~~-----~~l~~mk~~~~lin~a 244 (293)
T 3d4o_A 226 V-TA-----NVLAEMPSHTFVIDLA 244 (293)
T ss_dssp B-CH-----HHHHHSCTTCEEEECS
T ss_pred h-CH-----HHHHhcCCCCEEEEec
Confidence 3 22 3455789998776543
No 434
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=84.35 E-value=3.8 Score=34.68 Aligned_cols=75 Identities=13% Similarity=0.013 Sum_probs=50.5
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhC--CCCCcEEEEcCCCCCC-----CC----CCC
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKE--PLKECTIIEGDAEDLP-----FP----TDY 178 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~--~~~~i~~~~~d~~~~~-----~~----~~~ 178 (340)
.++++|-.|++.|. .+..+++. +.+|+++|.+++.++.+.+.. ...++.++.+|+.+.. +. .+.
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~ 83 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAE--GFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAP 83 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence 56788888887663 44555555 789999999887766555432 1346888999996632 00 046
Q ss_pred ccEEEecCccc
Q 019479 179 ADRYVSAGSIE 189 (340)
Q Consensus 179 fD~v~~~~~l~ 189 (340)
.|+++.+....
T Consensus 84 id~lv~nAg~~ 94 (252)
T 3h7a_A 84 LEVTIFNVGAN 94 (252)
T ss_dssp EEEEEECCCCC
T ss_pred ceEEEECCCcC
Confidence 89999876653
No 435
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=84.08 E-value=7.3 Score=33.06 Aligned_cols=75 Identities=17% Similarity=0.111 Sum_probs=50.5
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHh----CCCCCcEEEEcCCCCCC-----C-----C
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQK----EPLKECTIIEGDAEDLP-----F-----P 175 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~----~~~~~i~~~~~d~~~~~-----~-----~ 175 (340)
.++++|-.|++.|. .+..+++. +.+|+.+|.+++..+.+.+. ....++.++.+|+.+.. + .
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEA--GAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT 84 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 57888888887653 34555555 78999999998776665543 22345888899997632 0 0
Q ss_pred CCCccEEEecCccc
Q 019479 176 TDYADRYVSAGSIE 189 (340)
Q Consensus 176 ~~~fD~v~~~~~l~ 189 (340)
-+..|+++.+....
T Consensus 85 ~g~id~lvnnAg~~ 98 (265)
T 3lf2_A 85 LGCASILVNNAGQG 98 (265)
T ss_dssp HCSCSEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 14689999876654
No 436
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=84.02 E-value=2 Score=36.40 Aligned_cols=103 Identities=17% Similarity=0.103 Sum_probs=61.0
Q ss_pred CCCEEEEEcCccchHHHHHHHhC---CCceEEEEeCCHHHHHHHHHhC--CCCCcEEEEcCCCCCC-----CC-----CC
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHV---DAKNVTILDQSPHQLAKAKQKE--PLKECTIIEGDAEDLP-----FP-----TD 177 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~---~~~~v~g~D~s~~~~~~a~~~~--~~~~i~~~~~d~~~~~-----~~-----~~ 177 (340)
++++||-.|+ +|..+..+++.+ .+.+|++++.++...+...+.. ...++.++.+|+.+.. +. .+
T Consensus 3 ~~k~vlITGa-sggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (276)
T 1wma_A 3 GIHVALVTGG-NKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG 81 (276)
T ss_dssp CCCEEEESSC-SSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4677876665 455554444432 2689999999876655544332 1246888999987632 00 12
Q ss_pred CccEEEecCccccc--------CCHH-----------HHHHHHHHhcccCcEEEEEcc
Q 019479 178 YADRYVSAGSIEYW--------PDPQ-----------RGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 178 ~fD~v~~~~~l~~~--------~d~~-----------~~l~~~~~~LkpgG~l~i~~~ 216 (340)
.+|+|+.+...... .+.+ .+++.+.+.++++|+++.+..
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS 139 (276)
T 1wma_A 82 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS 139 (276)
T ss_dssp SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred CCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECC
Confidence 68999876544321 1111 345566667777788877643
No 437
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=84.01 E-value=5.2 Score=34.38 Aligned_cols=74 Identities=15% Similarity=0.163 Sum_probs=50.1
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC-----CC-----CCCc
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP-----FP-----TDYA 179 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~-----~~-----~~~f 179 (340)
.++++|-.|++.|. .+..+++. +.+|+.+|.+++..+...+... .++.++.+|+.+.. +. -+..
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 102 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFAKN--GAYVVVADVNEDAAVRVANEIG-SKAFGVRVDVSSAKDAESMVEKTTAKWGRV 102 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHC-TTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhC-CceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 57788888876653 34445554 7899999999887766655432 46788889986532 00 1368
Q ss_pred cEEEecCccc
Q 019479 180 DRYVSAGSIE 189 (340)
Q Consensus 180 D~v~~~~~l~ 189 (340)
|+++.+....
T Consensus 103 D~lv~nAg~~ 112 (277)
T 4dqx_A 103 DVLVNNAGFG 112 (277)
T ss_dssp CEEEECCCCC
T ss_pred CEEEECCCcC
Confidence 9999876653
No 438
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=83.96 E-value=3.9 Score=35.55 Aligned_cols=102 Identities=14% Similarity=0.062 Sum_probs=62.7
Q ss_pred CCCEEEEEcCcc----ch-HHHHHHHhCCCceEEEEeCCHHHHHHHHHhC-CCCCcEEEEcCCCCCC-----C-----CC
Q 019479 113 RNMRVVDVGGGT----GF-TTLGIVKHVDAKNVTILDQSPHQLAKAKQKE-PLKECTIIEGDAEDLP-----F-----PT 176 (340)
Q Consensus 113 ~~~~vLDiGcG~----G~-~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~-~~~~i~~~~~d~~~~~-----~-----~~ 176 (340)
.++++|-.|++. |. .+..+++. +.+|+.+|.++...+.+.+.. ...++.++.+|+.+.. + .-
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQ--GAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEW 106 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 578899999753 32 45555555 789999999875544433221 1134678889986632 0 01
Q ss_pred CCccEEEecCccccc---------CCH---H-----------HHHHHHHHhcccCcEEEEEcc
Q 019479 177 DYADRYVSAGSIEYW---------PDP---Q-----------RGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 177 ~~fD~v~~~~~l~~~---------~d~---~-----------~~l~~~~~~LkpgG~l~i~~~ 216 (340)
+..|+++.+..+... .+. . .+.+.+.+.++.+|+++.+..
T Consensus 107 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS 169 (296)
T 3k31_A 107 GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSY 169 (296)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred CCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEe
Confidence 468999987655421 111 1 345566677778898887643
No 439
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=83.67 E-value=0.76 Score=42.59 Aligned_cols=43 Identities=26% Similarity=0.436 Sum_probs=34.0
Q ss_pred CCEEEEEcCccchHHHHHHHhCC-----CceEEEEeCCHHHHHHHHHh
Q 019479 114 NMRVVDVGGGTGFTTLGIVKHVD-----AKNVTILDQSPHQLAKAKQK 156 (340)
Q Consensus 114 ~~~vLDiGcG~G~~~~~l~~~~~-----~~~v~g~D~s~~~~~~a~~~ 156 (340)
..+|+|+|.|+|.++..+++... ..+++.||+|+...+.-+++
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~ 185 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRET 185 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHH
Confidence 47999999999999988876531 24899999999877666554
No 440
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=83.50 E-value=13 Score=32.03 Aligned_cols=75 Identities=15% Similarity=0.120 Sum_probs=49.4
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCCC-C----C------C
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAEDL-P----F------P 175 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~~-~----~------~ 175 (340)
.+++||-.|++.|. .+..++++ +.+|++++.++...+.+.+.. ...++.++..|+.+. . + .
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSN--GIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 56788877876552 34444444 789999999987766554432 224688999999764 2 0 0
Q ss_pred CCCccEEEecCccc
Q 019479 176 TDYADRYVSAGSIE 189 (340)
Q Consensus 176 ~~~fD~v~~~~~l~ 189 (340)
.+..|+++.+-.+.
T Consensus 89 ~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 89 FGKLDILVNNAGVA 102 (311)
T ss_dssp HSSCCEEEECCCCC
T ss_pred CCCCCEEEECCccc
Confidence 14689999877654
No 441
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=83.24 E-value=4.8 Score=34.56 Aligned_cols=75 Identities=17% Similarity=0.197 Sum_probs=48.9
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhC--CCCCcEEEEcCCCCCCC---------CCCC
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKE--PLKECTIIEGDAEDLPF---------PTDY 178 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~--~~~~i~~~~~d~~~~~~---------~~~~ 178 (340)
.++++|-.|++.|. .+..+++. +.+|+.+|.+++..+.+.+.. ...++.++.+|+.+... ..+.
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~ 109 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGA--GAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAP 109 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 56788877776552 34444554 789999999876655544332 23568889999976430 0146
Q ss_pred ccEEEecCccc
Q 019479 179 ADRYVSAGSIE 189 (340)
Q Consensus 179 fD~v~~~~~l~ 189 (340)
.|+++.+....
T Consensus 110 iD~lvnnAg~~ 120 (275)
T 4imr_A 110 VDILVINASAQ 120 (275)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89999876653
No 442
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=83.06 E-value=3.1 Score=37.12 Aligned_cols=92 Identities=12% Similarity=0.117 Sum_probs=58.7
Q ss_pred CCEEEEE-cC-ccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC-----C-CCCCccEEEec
Q 019479 114 NMRVVDV-GG-GTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP-----F-PTDYADRYVSA 185 (340)
Q Consensus 114 ~~~vLDi-Gc-G~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~-----~-~~~~fD~v~~~ 185 (340)
+.+||-. |+ |.|..+..+++.. +.+|+++|.+++..+.+++.... .++..+-.++. . ....+|+|+-.
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~~Ga~---~~~~~~~~~~~~~v~~~~~~~g~D~vid~ 240 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEE-GFRPIVTVRRDEQIALLKDIGAA---HVLNEKAPDFEATLREVMKAEQPRIFLDA 240 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESCGGGHHHHHHHTCS---EEEETTSTTHHHHHHHHHHHHCCCEEEES
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCC---EEEECCcHHHHHHHHHHhcCCCCcEEEEC
Confidence 3566654 44 3577778888875 67999999999999998865321 12221111110 0 11359999864
Q ss_pred CcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 186 GSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 186 ~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
..- ..+..+.+.|+++|++++...
T Consensus 241 ~g~-------~~~~~~~~~l~~~G~iv~~G~ 264 (349)
T 3pi7_A 241 VTG-------PLASAIFNAMPKRARWIIYGR 264 (349)
T ss_dssp SCH-------HHHHHHHHHSCTTCEEEECCC
T ss_pred CCC-------hhHHHHHhhhcCCCEEEEEec
Confidence 332 234778899999999988753
No 443
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=82.96 E-value=7.7 Score=33.20 Aligned_cols=76 Identities=13% Similarity=0.129 Sum_probs=49.3
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeC-------------CHHHHHHHHHh--CCCCCcEEEEcCCCCCC-
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQ-------------SPHQLAKAKQK--EPLKECTIIEGDAEDLP- 173 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~-------------s~~~~~~a~~~--~~~~~i~~~~~d~~~~~- 173 (340)
.++++|-.|++.|. .+..++++ +.+|+++|. +++.++.+.+. ....++.++..|+.+..
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 91 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAE--GADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAA 91 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 57888888887653 34555555 789999997 56655554433 22356788889986532
Q ss_pred ----C-----CCCCccEEEecCcccc
Q 019479 174 ----F-----PTDYADRYVSAGSIEY 190 (340)
Q Consensus 174 ----~-----~~~~fD~v~~~~~l~~ 190 (340)
+ .-+..|+++.+.....
T Consensus 92 v~~~~~~~~~~~g~id~lvnnAg~~~ 117 (280)
T 3pgx_A 92 LRELVADGMEQFGRLDVVVANAGVLS 117 (280)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 0 0136899998766543
No 444
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=82.95 E-value=4.3 Score=35.74 Aligned_cols=75 Identities=13% Similarity=0.099 Sum_probs=50.2
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhC----CCCCcEEEEcCCCCCC-----C-----C
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKE----PLKECTIIEGDAEDLP-----F-----P 175 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~----~~~~i~~~~~d~~~~~-----~-----~ 175 (340)
.+++||-.|++.|. .+..++++ +.+|++++.++...+.+.+.. ...++.++..|+.+.. + .
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~--G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQ--GCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR 84 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 46789988887653 34444554 789999999988776655432 1236888999996632 0 1
Q ss_pred CCCccEEEecCccc
Q 019479 176 TDYADRYVSAGSIE 189 (340)
Q Consensus 176 ~~~fD~v~~~~~l~ 189 (340)
.+..|+++.+..+.
T Consensus 85 ~g~id~lv~nAg~~ 98 (319)
T 3ioy_A 85 FGPVSILCNNAGVN 98 (319)
T ss_dssp TCCEEEEEECCCCC
T ss_pred CCCCCEEEECCCcC
Confidence 14689999876654
No 445
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=82.49 E-value=3.4 Score=34.81 Aligned_cols=74 Identities=20% Similarity=0.185 Sum_probs=50.6
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC-----C-----CCCCc
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP-----F-----PTDYA 179 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~-----~-----~~~~f 179 (340)
.++++|-.|++.|. .+..++++ +.+|+.+|.+++..+...+.. ..++.++.+|+.+.. + ..+..
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 81 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAAD--GATVIVSDINAEGAKAAAASI-GKKARAIAADISDPGSVKALFAEIQALTGGI 81 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHH-CTTEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence 57889888876653 34455555 789999999998777665544 256788888986532 0 01368
Q ss_pred cEEEecCccc
Q 019479 180 DRYVSAGSIE 189 (340)
Q Consensus 180 D~v~~~~~l~ 189 (340)
|+++.+....
T Consensus 82 d~lv~nAg~~ 91 (247)
T 3rwb_A 82 DILVNNASIV 91 (247)
T ss_dssp SEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999876654
No 446
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=82.42 E-value=7.2 Score=36.05 Aligned_cols=89 Identities=16% Similarity=0.118 Sum_probs=55.6
Q ss_pred CCCCEEEEEcCcc-chHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCcccc
Q 019479 112 DRNMRVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEY 190 (340)
Q Consensus 112 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 190 (340)
-.+++|+-+|+|. |......++.+ +.+|+++|.++.....+.. .+.+ ..++++. -...|+|+....-.+
T Consensus 218 L~GktV~ViG~G~IGk~vA~~Lra~-Ga~Viv~D~dp~ra~~A~~----~G~~--v~~Leea---l~~ADIVi~atgt~~ 287 (435)
T 3gvp_A 218 FGGKQVVVCGYGEVGKGCCAALKAM-GSIVYVTEIDPICALQACM----DGFR--LVKLNEV---IRQVDIVITCTGNKN 287 (435)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHH----TTCE--ECCHHHH---TTTCSEEEECSSCSC
T ss_pred ecCCEEEEEeeCHHHHHHHHHHHHC-CCEEEEEeCChhhhHHHHH----cCCE--eccHHHH---HhcCCEEEECCCCcc
Confidence 3789999999995 55555555554 7899999999865554542 1222 2333321 234799998533233
Q ss_pred cCCHHHHHHHHHHhcccCcEEEEEc
Q 019479 191 WPDPQRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 191 ~~d~~~~l~~~~~~LkpgG~l~i~~ 215 (340)
+-+ .+..+.+|+|+.++-+.
T Consensus 288 lI~-----~e~l~~MK~gailINvg 307 (435)
T 3gvp_A 288 VVT-----REHLDRMKNSCIVCNMG 307 (435)
T ss_dssp SBC-----HHHHHHSCTTEEEEECS
T ss_pred cCC-----HHHHHhcCCCcEEEEec
Confidence 222 36678899998776553
No 447
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=82.37 E-value=11 Score=31.33 Aligned_cols=90 Identities=10% Similarity=0.055 Sum_probs=59.3
Q ss_pred CCCEEEEEcCccchHHHHHHHhCC--CceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC----CCCCCccEEEecC
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVD--AKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP----FPTDYADRYVSAG 186 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~--~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~----~~~~~fD~v~~~~ 186 (340)
...+|+=+|+ |..+..+++.+- +. |+++|.+++.++.++ .++.++.+|..+.. ..-..+|+|++..
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----SGANFVHGDPTRVSDLEKANVRGARAVIVDL 79 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----TTCEEEESCTTCHHHHHHTTCTTCSEEEECC
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----cCCeEEEcCCCCHHHHHhcCcchhcEEEEcC
Confidence 3468988988 566666666652 45 999999998877765 35788999986521 2234689888742
Q ss_pred cccccCCHH--HHHHHHHHhcccCcEEEEEc
Q 019479 187 SIEYWPDPQ--RGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 187 ~l~~~~d~~--~~l~~~~~~LkpgG~l~i~~ 215 (340)
++.. .......+.+.|+..++...
T Consensus 80 -----~~d~~n~~~~~~a~~~~~~~~iia~~ 105 (234)
T 2aef_A 80 -----ESDSETIHCILGIRKIDESVRIIAEA 105 (234)
T ss_dssp -----SCHHHHHHHHHHHHHHCSSSEEEEEC
T ss_pred -----CCcHHHHHHHHHHHHHCCCCeEEEEE
Confidence 2332 34445666778877776654
No 448
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=82.35 E-value=7 Score=33.43 Aligned_cols=102 Identities=18% Similarity=0.163 Sum_probs=62.5
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCC-HHHHHHHHHhC--CCCCcEEEEcCCCCCC-----C-----CC
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQS-PHQLAKAKQKE--PLKECTIIEGDAEDLP-----F-----PT 176 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s-~~~~~~a~~~~--~~~~i~~~~~d~~~~~-----~-----~~ 176 (340)
.++++|-.|++.|. .+..++++ +.+|+.+|.. ....+...+.. ...++.++.+|+.+.. + .-
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALE--GAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL 107 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 57889988887653 34555555 7899988654 34333333221 1356788899986532 0 01
Q ss_pred CCccEEEecCcccccC-----C---HH-----------HHHHHHHHhcccCcEEEEEcc
Q 019479 177 DYADRYVSAGSIEYWP-----D---PQ-----------RGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 177 ~~fD~v~~~~~l~~~~-----d---~~-----------~~l~~~~~~LkpgG~l~i~~~ 216 (340)
+..|+++.+-.+.... + ++ .+++.+.+.++++|+++.+..
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 3689999876553321 1 11 345667778888898887743
No 449
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=82.33 E-value=10 Score=31.54 Aligned_cols=75 Identities=12% Similarity=0.043 Sum_probs=49.6
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhC--CCCCcEEEEcCCCCCC----------CCCC
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKE--PLKECTIIEGDAEDLP----------FPTD 177 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~--~~~~i~~~~~d~~~~~----------~~~~ 177 (340)
.++++|-.|++.|. .+..++++ +.+|++++.++...+...+.. ...++.++..|+.+.. ...+
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASK--GATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL 81 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 46788888876552 34455554 789999999987776655432 1246888999986532 1124
Q ss_pred CccEEEecCccc
Q 019479 178 YADRYVSAGSIE 189 (340)
Q Consensus 178 ~fD~v~~~~~l~ 189 (340)
..|+++.+....
T Consensus 82 ~id~li~~Ag~~ 93 (247)
T 3lyl_A 82 AIDILVNNAGIT 93 (247)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999876554
No 450
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=82.24 E-value=5.3 Score=33.57 Aligned_cols=72 Identities=21% Similarity=0.289 Sum_probs=47.1
Q ss_pred CCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC-----CC-----CCCcc
Q 019479 114 NMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP-----FP-----TDYAD 180 (340)
Q Consensus 114 ~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~-----~~-----~~~fD 180 (340)
+++||-.|++.|. .+..++++ +.+|+.+|.+++..+...+.. .++.++.+|+.+.. +. -+..|
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 77 (247)
T 3dii_A 2 NRGVIVTGGGHGIGKQICLDFLEA--GDKVCFIDIDEKRSADFAKER--PNLFYFHGDVADPLTLKKFVEYAMEKLQRID 77 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHTTC--TTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhc--ccCCeEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence 4678878876552 34445554 789999999988776665432 45678899986632 00 13689
Q ss_pred EEEecCccc
Q 019479 181 RYVSAGSIE 189 (340)
Q Consensus 181 ~v~~~~~l~ 189 (340)
+++.+....
T Consensus 78 ~lv~nAg~~ 86 (247)
T 3dii_A 78 VLVNNACRG 86 (247)
T ss_dssp EEEECCC-C
T ss_pred EEEECCCCC
Confidence 999876543
No 451
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=82.19 E-value=1.6 Score=34.31 Aligned_cols=101 Identities=18% Similarity=0.142 Sum_probs=60.9
Q ss_pred CCCEEEEEcCccchHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCC-CCC----CCCCccEEEecCc
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAED-LPF----PTDYADRYVSAGS 187 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~-~~~----~~~~fD~v~~~~~ 187 (340)
-..-|||+|-|+|..-..+.+.+|+.+++++|-.-..-- -...+.-.++.+|+.+ ++. -..+.-++.....
T Consensus 40 ~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~hp----~~~P~~e~~ilGdi~~tL~~~~~r~g~~a~LaHaD~G 115 (174)
T 3iht_A 40 LSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASHP----DSTPPEAQLILGDIRETLPATLERFGATASLVHADLG 115 (174)
T ss_dssp CCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCCG----GGCCCGGGEEESCHHHHHHHHHHHHCSCEEEEEECCC
T ss_pred CCCceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccCC----CCCCchHheecccHHHHHHHHHHhcCCceEEEEeecC
Confidence 345799999999999999999999999999997210000 0011234578888855 231 1334445555444
Q ss_pred ccccCCHHHH----HHHHHHhcccCcEEEEEccC
Q 019479 188 IEYWPDPQRG----IKEAYRVLKIGGKACVIGPV 217 (340)
Q Consensus 188 l~~~~d~~~~----l~~~~~~LkpgG~l~i~~~~ 217 (340)
.++-+..... =.-+..+|.|||.++-..+.
T Consensus 116 ~g~~~~d~a~a~~lsplI~~~la~GGi~vS~~pl 149 (174)
T 3iht_A 116 GHNREKNDRFARLISPLIEPHLAQGGLMVSSDRM 149 (174)
T ss_dssp CSCHHHHHHHHHHHHHHHGGGEEEEEEEEESSCC
T ss_pred CCCcchhHHHHHhhhHHHHHHhcCCcEEEeCCcc
Confidence 4432222222 23456788999988655443
No 452
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=82.13 E-value=15 Score=31.14 Aligned_cols=73 Identities=16% Similarity=0.181 Sum_probs=48.2
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCH--HHHHHHHHhCCCCCcEEEEcCCCCCC-----CCCCCccEE
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSP--HQLAKAKQKEPLKECTIIEGDAEDLP-----FPTDYADRY 182 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~--~~~~~a~~~~~~~~i~~~~~d~~~~~-----~~~~~fD~v 182 (340)
.++++|--|++.|. .+..|++. +.+|+..|.+. +..+..++. ..++.++..|+.+.. +..+..|++
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~--Ga~Vvi~~r~~~~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~~g~iDiL 83 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAA--GAEVVCAARRAPDETLDIIAKD--GGNASALLIDFADPLAAKDSFTDAGFDIL 83 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHHHT--TCCEEEEECCTTSTTTTTTSSTTTCCCEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHc--CCEEEEEeCCcHHHHHHHHHHh--CCcEEEEEccCCCHHHHHHHHHhCCCCEE
Confidence 67888888877764 45556665 89999999864 333333332 246778888886522 345679999
Q ss_pred EecCccc
Q 019479 183 VSAGSIE 189 (340)
Q Consensus 183 ~~~~~l~ 189 (340)
+.+-.+.
T Consensus 84 VNNAGi~ 90 (247)
T 4hp8_A 84 VNNAGII 90 (247)
T ss_dssp EECCCCC
T ss_pred EECCCCC
Confidence 9876554
No 453
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=81.97 E-value=4.6 Score=34.54 Aligned_cols=102 Identities=18% Similarity=0.181 Sum_probs=61.3
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCC------------HHHHHHHHHhC--CCCCcEEEEcCCCCCC--
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQS------------PHQLAKAKQKE--PLKECTIIEGDAEDLP-- 173 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s------------~~~~~~a~~~~--~~~~i~~~~~d~~~~~-- 173 (340)
.++++|-.|++.|. .+..++++ +.+|+++|.+ ++.++...+.. ...++.++.+|+.+..
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 89 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAAD--GADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESL 89 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence 57889988876652 44555555 7899999986 44444433221 1256888999997632
Q ss_pred ---CC-----CCCccEEEecCcccccCC----HH-----------HHHHHHHHhcc---cCcEEEEEcc
Q 019479 174 ---FP-----TDYADRYVSAGSIEYWPD----PQ-----------RGIKEAYRVLK---IGGKACVIGP 216 (340)
Q Consensus 174 ---~~-----~~~fD~v~~~~~l~~~~d----~~-----------~~l~~~~~~Lk---pgG~l~i~~~ 216 (340)
+. -+..|+++.+..+..... ++ .+++.+.+.++ .+|+++.+..
T Consensus 90 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS 158 (278)
T 3sx2_A 90 SAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISS 158 (278)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcc
Confidence 00 136899998776654321 11 23444555453 3688877653
No 454
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=81.84 E-value=7.1 Score=33.36 Aligned_cols=76 Identities=13% Similarity=0.177 Sum_probs=48.9
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeC-------------CHHHHHHHHHh--CCCCCcEEEEcCCCCCC-
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQ-------------SPHQLAKAKQK--EPLKECTIIEGDAEDLP- 173 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~-------------s~~~~~~a~~~--~~~~~i~~~~~d~~~~~- 173 (340)
.++++|-.|++.|. .+..++++ +.+|+.+|. +++.++...+. ....++.++..|+.+..
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 87 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAE--GADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR 87 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 57889888887653 44555555 789999998 55555444332 12356788899987632
Q ss_pred ----CC-----CCCccEEEecCcccc
Q 019479 174 ----FP-----TDYADRYVSAGSIEY 190 (340)
Q Consensus 174 ----~~-----~~~fD~v~~~~~l~~ 190 (340)
+. -+..|+++.+..+..
T Consensus 88 v~~~~~~~~~~~g~id~lvnnAg~~~ 113 (277)
T 3tsc_A 88 LRKVVDDGVAALGRLDIIVANAGVAA 113 (277)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 00 146899998766543
No 455
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=81.66 E-value=8.9 Score=28.57 Aligned_cols=92 Identities=14% Similarity=0.062 Sum_probs=50.9
Q ss_pred CCEEEEEcCccchHHHHHHHhC--CCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC----CCCCCccEEEecCc
Q 019479 114 NMRVVDVGGGTGFTTLGIVKHV--DAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP----FPTDYADRYVSAGS 187 (340)
Q Consensus 114 ~~~vLDiGcG~G~~~~~l~~~~--~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~----~~~~~fD~v~~~~~ 187 (340)
..+|+-+|+| ..+..+++.+ .+.+|+++|.+++.++.+++ ....++.+|..+.. .....+|+|+....
T Consensus 6 ~~~v~I~G~G--~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~----~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~ 79 (144)
T 2hmt_A 6 NKQFAVIGLG--RFGGSIVKELHRMGHEVLAVDINEEKVNAYAS----YATHAVIANATEENELLSLGIRNFEYVIVAIG 79 (144)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT----TCSEEEECCTTCHHHHHTTTGGGCSEEEECCC
T ss_pred CCcEEEECCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----hCCEEEEeCCCCHHHHHhcCCCCCCEEEECCC
Confidence 4579999985 4444433322 26789999998876554432 23456777765421 11245899887533
Q ss_pred ccccCCHHHHHHHHHHhcccCcEEEEE
Q 019479 188 IEYWPDPQRGIKEAYRVLKIGGKACVI 214 (340)
Q Consensus 188 l~~~~d~~~~l~~~~~~LkpgG~l~i~ 214 (340)
-. . +....+....+.+.+. +++..
T Consensus 80 ~~-~-~~~~~~~~~~~~~~~~-~ii~~ 103 (144)
T 2hmt_A 80 AN-I-QASTLTTLLLKELDIP-NIWVK 103 (144)
T ss_dssp SC-H-HHHHHHHHHHHHTTCS-EEEEE
T ss_pred Cc-h-HHHHHHHHHHHHcCCC-eEEEE
Confidence 21 0 1122344455556665 65544
No 456
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=81.65 E-value=5.5 Score=34.76 Aligned_cols=89 Identities=12% Similarity=0.114 Sum_probs=54.5
Q ss_pred CCCEEEEEcCcc-chHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEE-cCCCCCCCCCCCccEEEecCcccc
Q 019479 113 RNMRVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIE-GDAEDLPFPTDYADRYVSAGSIEY 190 (340)
Q Consensus 113 ~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~-~d~~~~~~~~~~fD~v~~~~~l~~ 190 (340)
.+++|+-||+|. |......+..+ +.+|+++|.++...+.+.+. +++... .++.++ -...|+|+.....+.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~d~~~~~~~~~~~~----g~~~~~~~~l~~~---l~~aDvVi~~~p~~~ 227 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAAL-GANVKVGARSSAHLARITEM----GLVPFHTDELKEH---VKDIDICINTIPSMI 227 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT----TCEEEEGGGHHHH---STTCSEEEECCSSCC
T ss_pred CCCEEEEEcccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHC----CCeEEchhhHHHH---hhCCCEEEECCChhh
Confidence 688999999974 44444444444 67999999998766554431 233221 222221 245899998766644
Q ss_pred cCCHHHHHHHHHHhcccCcEEEEEc
Q 019479 191 WPDPQRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 191 ~~d~~~~l~~~~~~LkpgG~l~i~~ 215 (340)
+ + ++..+.+|||+.++-+.
T Consensus 228 i-~-----~~~~~~mk~g~~lin~a 246 (300)
T 2rir_A 228 L-N-----QTVLSSMTPKTLILDLA 246 (300)
T ss_dssp B-C-----HHHHTTSCTTCEEEECS
T ss_pred h-C-----HHHHHhCCCCCEEEEEe
Confidence 3 2 23457789988775543
No 457
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=81.63 E-value=6.2 Score=33.41 Aligned_cols=101 Identities=16% Similarity=0.168 Sum_probs=61.2
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEE-eCCHHHHHHHHHh--CCCCCcEEEEcCCCCCC-----C-----CC
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTIL-DQSPHQLAKAKQK--EPLKECTIIEGDAEDLP-----F-----PT 176 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~-D~s~~~~~~a~~~--~~~~~i~~~~~d~~~~~-----~-----~~ 176 (340)
.++++|-.|++.|. .+..++++ +.+|+.+ +.++...+.+.+. ....++.++.+|+.+.. + .-
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQE--GANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 57889988887653 34555555 7889888 6555554444332 22356888999997632 0 01
Q ss_pred CCccEEEecCccc-c---cC--CH---H-----------HHHHHHHHhcccCcEEEEEc
Q 019479 177 DYADRYVSAGSIE-Y---WP--DP---Q-----------RGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 177 ~~fD~v~~~~~l~-~---~~--d~---~-----------~~l~~~~~~LkpgG~l~i~~ 215 (340)
+..|+++.+.... . +. +. + .+.+.+.+.++++|+++.+.
T Consensus 85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 143 (259)
T 3edm_A 85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFS 143 (259)
T ss_dssp CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 3689998765433 1 11 11 1 34556666777788887764
No 458
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=81.58 E-value=9.7 Score=32.85 Aligned_cols=59 Identities=8% Similarity=0.066 Sum_probs=37.5
Q ss_pred CCCEEEEEcCccchHHHHHHHhC--CCceEEEEe-CCHHHHHHHHHhC---CCCCcEEEEcCCCCC
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHV--DAKNVTILD-QSPHQLAKAKQKE---PLKECTIIEGDAEDL 172 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~--~~~~v~g~D-~s~~~~~~a~~~~---~~~~i~~~~~d~~~~ 172 (340)
.++++|-.|++.| .+..+++.+ .+.+|+.+| .+++.++.+.+.. ...++.++..|+.+.
T Consensus 8 ~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~ 72 (291)
T 1e7w_A 8 TVPVALVTGAAKR-LGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNV 72 (291)
T ss_dssp CCCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSS
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCc
Confidence 4567877776554 333333332 278999999 8887666554332 124688889998764
No 459
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=81.47 E-value=3.7 Score=35.00 Aligned_cols=102 Identities=11% Similarity=0.127 Sum_probs=61.0
Q ss_pred CCCEEEEEcC-ccchHHHHHHHhC--CCceEEEEeCCHHH-HHHHHHhCCCCCcEEEEcCCCCCC-----CC-----CC-
Q 019479 113 RNMRVVDVGG-GTGFTTLGIVKHV--DAKNVTILDQSPHQ-LAKAKQKEPLKECTIIEGDAEDLP-----FP-----TD- 177 (340)
Q Consensus 113 ~~~~vLDiGc-G~G~~~~~l~~~~--~~~~v~g~D~s~~~-~~~a~~~~~~~~i~~~~~d~~~~~-----~~-----~~- 177 (340)
.++++|-.|+ |+|..+..+++.+ .+.+|+.+|.++.. ++...+... .++.++.+|+.+.. +. -+
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLP-AKAPLLELDVQNEEHLASLAGRVTEAIGA 84 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSS-SCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcC-CCceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4678998997 3554444444432 27899999987654 344443332 35778889986532 00 12
Q ss_pred --CccEEEecCcccc--------c--CCHH--------------HHHHHHHHhcccCcEEEEEc
Q 019479 178 --YADRYVSAGSIEY--------W--PDPQ--------------RGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 178 --~fD~v~~~~~l~~--------~--~d~~--------------~~l~~~~~~LkpgG~l~i~~ 215 (340)
..|+++.+..... + .+.+ .+.+.+.+.++++|+++.+.
T Consensus 85 ~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 148 (269)
T 2h7i_A 85 GNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMD 148 (269)
T ss_dssp TCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEc
Confidence 6899998765432 1 1111 23455666677778887764
No 460
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=81.38 E-value=4.3 Score=34.92 Aligned_cols=76 Identities=16% Similarity=0.129 Sum_probs=50.5
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhC--CCCCcEEEEcCCCCCC-----C-----CCC
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKE--PLKECTIIEGDAEDLP-----F-----PTD 177 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~--~~~~i~~~~~d~~~~~-----~-----~~~ 177 (340)
.++++|-.|++.|. .+..+++. +.+|+.+|.+++..+...+.. ...++.++.+|+.+.. + .-+
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 108 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEA--GAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELG 108 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 57889888877653 34455555 789999999887666554432 2246788999997632 0 013
Q ss_pred CccEEEecCcccc
Q 019479 178 YADRYVSAGSIEY 190 (340)
Q Consensus 178 ~fD~v~~~~~l~~ 190 (340)
..|+++.+.....
T Consensus 109 ~iD~lvnnAg~~~ 121 (276)
T 3r1i_A 109 GIDIAVCNAGIVS 121 (276)
T ss_dssp CCSEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 6899998766543
No 461
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=81.38 E-value=5.2 Score=33.66 Aligned_cols=74 Identities=9% Similarity=0.003 Sum_probs=49.3
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC-----C-----CCCCc
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP-----F-----PTDYA 179 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~-----~-----~~~~f 179 (340)
.++++|-.|++.|. .+..++++ +.+|+++|.+++..+...+... .+..++..|+.+.. + .-+..
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAER--GAKVIGTATSESGAQAISDYLG-DNGKGMALNVTNPESIEAVLKAITDEFGGV 84 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHG-GGEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhc-ccceEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 56788888876652 34445554 7899999999887776654432 34677888886632 0 01368
Q ss_pred cEEEecCccc
Q 019479 180 DRYVSAGSIE 189 (340)
Q Consensus 180 D~v~~~~~l~ 189 (340)
|+++.+-.+.
T Consensus 85 D~lv~nAg~~ 94 (248)
T 3op4_A 85 DILVNNAGIT 94 (248)
T ss_dssp SEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999876554
No 462
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=81.25 E-value=2.3 Score=38.12 Aligned_cols=93 Identities=14% Similarity=0.167 Sum_probs=55.1
Q ss_pred CCCCEEEEEcC--ccchHHHHHHHhCCCceEEE-EeCCH---HHHHHHHHhCCCCCcEEEE------cCCCCCCCCCCCc
Q 019479 112 DRNMRVVDVGG--GTGFTTLGIVKHVDAKNVTI-LDQSP---HQLAKAKQKEPLKECTIIE------GDAEDLPFPTDYA 179 (340)
Q Consensus 112 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~g-~D~s~---~~~~~a~~~~~~~~i~~~~------~d~~~~~~~~~~f 179 (340)
+++.+||-+|+ |.|..+..+++.. ++++++ ++.++ +..+.+++. .... ++. .++.+..-..+.+
T Consensus 166 ~~g~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~~~l-Ga~~--vi~~~~~~~~~~~~~~~~~~~~ 241 (357)
T 1zsy_A 166 QPGDSVIQNASNSGVGQAVIQIAAAL-GLRTINVVRDRPDIQKLSDRLKSL-GAEH--VITEEELRRPEMKNFFKDMPQP 241 (357)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEECCCSCHHHHHHHHHHT-TCSE--EEEHHHHHSGGGGGTTSSSCCC
T ss_pred CCCCEEEEeCCcCHHHHHHHHHHHHc-CCEEEEEecCccchHHHHHHHHhc-CCcE--EEecCcchHHHHHHHHhCCCCc
Confidence 57899999996 5788999999886 565554 44433 235566543 2121 111 1121111111248
Q ss_pred cEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEc
Q 019479 180 DRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 180 D~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~ 215 (340)
|+|+-.-. .. ...++.+.|++||++++..
T Consensus 242 Dvvid~~g------~~-~~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 242 RLALNCVG------GK-SSTELLRQLARGGTMVTYG 270 (357)
T ss_dssp SEEEESSC------HH-HHHHHHTTSCTTCEEEECC
T ss_pred eEEEECCC------cH-HHHHHHHhhCCCCEEEEEe
Confidence 99885322 12 2345789999999998874
No 463
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=81.12 E-value=3.1 Score=35.37 Aligned_cols=103 Identities=15% Similarity=0.150 Sum_probs=58.6
Q ss_pred CCCEEEEEcCccchHHHHHHHhC--CCceEEEEeC-CHHHHHHHHHhC--CCCCcEEEEcCCCCCC-----CC-----CC
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHV--DAKNVTILDQ-SPHQLAKAKQKE--PLKECTIIEGDAEDLP-----FP-----TD 177 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~--~~~~v~g~D~-s~~~~~~a~~~~--~~~~i~~~~~d~~~~~-----~~-----~~ 177 (340)
.+++||-.|++ |..+..+++.+ .+.+|++++. ++...+...+.. ...++.++.+|+.+.. +. -+
T Consensus 20 ~~k~vlItGas-ggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 98 (274)
T 1ja9_A 20 AGKVALTTGAG-RGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG 98 (274)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 46788877654 44444444432 2789999998 766555443321 1246788899987532 00 12
Q ss_pred CccEEEecCcccccC-----CH---H-----------HHHHHHHHhcccCcEEEEEcc
Q 019479 178 YADRYVSAGSIEYWP-----DP---Q-----------RGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 178 ~fD~v~~~~~l~~~~-----d~---~-----------~~l~~~~~~LkpgG~l~i~~~ 216 (340)
..|+++.+....... +. + .+++.+.+.++.+|+++.+..
T Consensus 99 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS 156 (274)
T 1ja9_A 99 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSS 156 (274)
T ss_dssp CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred CCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcC
Confidence 689998765543221 11 1 233444555655688877643
No 464
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=81.12 E-value=10 Score=34.80 Aligned_cols=42 Identities=10% Similarity=0.041 Sum_probs=34.1
Q ss_pred CCEEEEEcCccchHHHHHHHhCCC---ce----EEEEeCCHHHHHHHHHhC
Q 019479 114 NMRVVDVGGGTGFTTLGIVKHVDA---KN----VTILDQSPHQLAKAKQKE 157 (340)
Q Consensus 114 ~~~vLDiGcG~G~~~~~l~~~~~~---~~----v~g~D~s~~~~~~a~~~~ 157 (340)
..+|+|+-||.|.....+.+. + .. |.++|+++.+++.-+.+.
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~a--G~~~~~~~~~v~avEid~~A~~ty~~n~ 58 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNI--ARSKNWEIQHSGMVEWFVDAIVSYVAIH 58 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHH--HHHHTEEEEEEEEECCBHHHHHHHHHHH
T ss_pred cceEEEEecCcCHHHHHHHHh--CCccccceeeEEEEecCHHHHHHHHHHc
Confidence 458999999999999988776 3 22 778999999988877663
No 465
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=81.07 E-value=5.8 Score=34.41 Aligned_cols=102 Identities=17% Similarity=0.225 Sum_probs=61.9
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCH--HHHHHHHHh--CCCCCcEEEEcCCCCCC-----C-----C
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSP--HQLAKAKQK--EPLKECTIIEGDAEDLP-----F-----P 175 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~--~~~~~a~~~--~~~~~i~~~~~d~~~~~-----~-----~ 175 (340)
.++++|-.|++.|. .+..++++ +.+|+.+|.+. ...+...+. ....++.++.+|+.+.. + .
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYARE--GADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 57889988876653 34445554 78999998862 233333222 12256788888986532 0 0
Q ss_pred CCCccEEEecCcccc-cC-----CH---H-----------HHHHHHHHhcccCcEEEEEcc
Q 019479 176 TDYADRYVSAGSIEY-WP-----DP---Q-----------RGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 176 ~~~fD~v~~~~~l~~-~~-----d~---~-----------~~l~~~~~~LkpgG~l~i~~~ 216 (340)
-+..|+++.+..... .. +. + .+++.+.+.++.+|+++.+..
T Consensus 126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS 186 (294)
T 3r3s_A 126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSS 186 (294)
T ss_dssp HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 146899998766532 11 11 1 345666777888899887753
No 466
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=80.99 E-value=6.4 Score=33.60 Aligned_cols=75 Identities=8% Similarity=0.003 Sum_probs=48.9
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhC--CCCCcEEEEcCCCCCC-----C-----CCC
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKE--PLKECTIIEGDAEDLP-----F-----PTD 177 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~--~~~~i~~~~~d~~~~~-----~-----~~~ 177 (340)
.++++|-.|++.|. .+..+++. +.+|+.+|.+++.++.+.+.. ...++.++.+|+.+.. + .-+
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVA--GAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35778878876553 34444554 789999999988776665432 1245778888986532 0 013
Q ss_pred CccEEEecCccc
Q 019479 178 YADRYVSAGSIE 189 (340)
Q Consensus 178 ~fD~v~~~~~l~ 189 (340)
..|+++.+..+.
T Consensus 81 ~iD~lVnnAG~~ 92 (264)
T 3tfo_A 81 RIDVLVNNAGVM 92 (264)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999876554
No 467
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=80.91 E-value=13 Score=31.45 Aligned_cols=102 Identities=11% Similarity=0.064 Sum_probs=57.5
Q ss_pred CCCEEEEEcCcc-chHHHHHHHhC--CCceEEEEeCCH---HHHHHHHHhCCCCCcEEEEcCCCCCC----------CCC
Q 019479 113 RNMRVVDVGGGT-GFTTLGIVKHV--DAKNVTILDQSP---HQLAKAKQKEPLKECTIIEGDAEDLP----------FPT 176 (340)
Q Consensus 113 ~~~~vLDiGcG~-G~~~~~l~~~~--~~~~v~g~D~s~---~~~~~a~~~~~~~~i~~~~~d~~~~~----------~~~ 176 (340)
.+++||-.|++. |..+..+++.+ .+.+|+.+|.++ +.++...+.. .+..++.+|+.+.. -.-
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQL--GSDIVLQCDVAEDASIDTMFAELGKVW 85 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHT--TCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhc--CCcEEEEccCCCHHHHHHHHHHHHHHc
Confidence 467888888751 33443333322 278999999876 3333333222 23467888886521 112
Q ss_pred CCccEEEecCccccc----------CCHH--------------HHHHHHHHhcccCcEEEEEcc
Q 019479 177 DYADRYVSAGSIEYW----------PDPQ--------------RGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 177 ~~fD~v~~~~~l~~~----------~d~~--------------~~l~~~~~~LkpgG~l~i~~~ 216 (340)
+..|+++.+...... .+.+ .+++.+.+.++++|+++.+..
T Consensus 86 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 149 (265)
T 1qsg_A 86 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSY 149 (265)
T ss_dssp SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred CCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcc
Confidence 368999987655331 1111 234455566666788877643
No 468
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=80.74 E-value=2.3 Score=36.38 Aligned_cols=78 Identities=13% Similarity=0.048 Sum_probs=46.3
Q ss_pred EEEEcCCCC-C-CCCCCCccEEEecCccccc----C----------CHHHHHHHHHHhcccCcEEEEEccCCCchhHhhH
Q 019479 163 TIIEGDAED-L-PFPTDYADRYVSAGSIEYW----P----------DPQRGIKEAYRVLKIGGKACVIGPVYPTFWLSRF 226 (340)
Q Consensus 163 ~~~~~d~~~-~-~~~~~~fD~v~~~~~l~~~----~----------d~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~ 226 (340)
+++++|..+ + .+++++||+|++.--...- + -....++++.++|+|||.+++... +.
T Consensus 6 ~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~---d~----- 77 (260)
T 1g60_A 6 KIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNT---PF----- 77 (260)
T ss_dssp SEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC---HH-----
T ss_pred eEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcC---cH-----
Confidence 456666532 1 1345678888774332211 0 123678889999999999988731 11
Q ss_pred hhhHhhcCCCHHHHHHHHHHCCCcEEEEEEe
Q 019479 227 FADVWMLFPKEEEYIEWFQKAGFKDVKLKRI 257 (340)
Q Consensus 227 ~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~ 257 (340)
....+...+.+.||........
T Consensus 78 ---------~~~~~~~~~~~~gf~~~~~iiW 99 (260)
T 1g60_A 78 ---------NCAFICQYLVSKGMIFQNWITW 99 (260)
T ss_dssp ---------HHHHHHHHHHHTTCEEEEEEEE
T ss_pred ---------HHHHHHHHHHhhccceeEEEEE
Confidence 0123556788899986654443
No 469
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=80.73 E-value=0.97 Score=40.75 Aligned_cols=94 Identities=15% Similarity=0.108 Sum_probs=57.2
Q ss_pred CCC-CEEEEEcC--ccchHHHHHHHhCCCceEEEEeCCHHH----HHHHHHhCCCCCcEEEE------cCCCC-CC-C--
Q 019479 112 DRN-MRVVDVGG--GTGFTTLGIVKHVDAKNVTILDQSPHQ----LAKAKQKEPLKECTIIE------GDAED-LP-F-- 174 (340)
Q Consensus 112 ~~~-~~vLDiGc--G~G~~~~~l~~~~~~~~v~g~D~s~~~----~~~a~~~~~~~~i~~~~------~d~~~-~~-~-- 174 (340)
+++ .+||-+|+ |.|..+..+++.. +.+++++.-++.. .+.+++.-. .. ++. .|+.+ +. .
T Consensus 165 ~~g~~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~~~lGa-~~--vi~~~~~~~~~~~~~i~~~t~ 240 (364)
T 1gu7_A 165 TPGKDWFIQNGGTSAVGKYASQIGKLL-NFNSISVIRDRPNLDEVVASLKELGA-TQ--VITEDQNNSREFGPTIKEWIK 240 (364)
T ss_dssp CTTTCEEEESCTTSHHHHHHHHHHHHH-TCEEEEEECCCTTHHHHHHHHHHHTC-SE--EEEHHHHHCGGGHHHHHHHHH
T ss_pred CCCCcEEEECCCCcHHHHHHHHHHHHC-CCEEEEEecCccccHHHHHHHHhcCC-eE--EEecCccchHHHHHHHHHHhh
Confidence 477 99999986 4688888888875 6788887654432 455544321 11 111 12111 10 1
Q ss_pred -CCCCccEEEecCcccccCCHHHHHHHHHHhcccCcEEEEEcc
Q 019479 175 -PTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 175 -~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~i~~~ 216 (340)
....+|+|+-.-. ..... .+.+.|+++|++++...
T Consensus 241 ~~~~g~Dvvid~~G------~~~~~-~~~~~l~~~G~~v~~g~ 276 (364)
T 1gu7_A 241 QSGGEAKLALNCVG------GKSST-GIARKLNNNGLMLTYGG 276 (364)
T ss_dssp HHTCCEEEEEESSC------HHHHH-HHHHTSCTTCEEEECCC
T ss_pred ccCCCceEEEECCC------chhHH-HHHHHhccCCEEEEecC
Confidence 1346999985432 22233 67899999999988753
No 470
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=80.70 E-value=10 Score=32.48 Aligned_cols=75 Identities=16% Similarity=0.200 Sum_probs=48.8
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCC----------------HHHHHHHHHh--CCCCCcEEEEcCCCC
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQS----------------PHQLAKAKQK--EPLKECTIIEGDAED 171 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s----------------~~~~~~a~~~--~~~~~i~~~~~d~~~ 171 (340)
.++++|-.|++.|. .+..+++. +.+|+++|.+ ++.++...+. ....++.++..|+.+
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 87 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQE--GADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRD 87 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCC
Confidence 57889988887663 44555555 7899999987 5555444332 223568888999965
Q ss_pred CC----C------CCCCccEEEecCccc
Q 019479 172 LP----F------PTDYADRYVSAGSIE 189 (340)
Q Consensus 172 ~~----~------~~~~fD~v~~~~~l~ 189 (340)
.. + .-+..|+++.+..+.
T Consensus 88 ~~~v~~~~~~~~~~~g~id~lv~nAg~~ 115 (286)
T 3uve_A 88 YDALKAAVDSGVEQLGRLDIIVANAGIG 115 (286)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCccc
Confidence 32 0 013689999876653
No 471
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=80.68 E-value=6.7 Score=36.45 Aligned_cols=89 Identities=17% Similarity=0.071 Sum_probs=55.9
Q ss_pred CCCCEEEEEcCcc-chHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCcccc
Q 019479 112 DRNMRVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEY 190 (340)
Q Consensus 112 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 190 (340)
-.+++|+-+|+|. |......++.+ +.+|+++|.++.....+.. .++++ .++++. -...|+|+....-.+
T Consensus 245 L~GKTVgVIG~G~IGr~vA~~lraf-Ga~Viv~d~dp~~a~~A~~----~G~~v--v~LeEl---L~~ADIVv~atgt~~ 314 (464)
T 3n58_A 245 MAGKVAVVCGYGDVGKGSAQSLAGA-GARVKVTEVDPICALQAAM----DGFEV--VTLDDA---ASTADIVVTTTGNKD 314 (464)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSHHHHHHHHH----TTCEE--CCHHHH---GGGCSEEEECCSSSS
T ss_pred ccCCEEEEECcCHHHHHHHHHHHHC-CCEEEEEeCCcchhhHHHh----cCcee--ccHHHH---HhhCCEEEECCCCcc
Confidence 4789999999985 55555555555 7899999998865444432 22332 233321 134799887533233
Q ss_pred cCCHHHHHHHHHHhcccCcEEEEEc
Q 019479 191 WPDPQRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 191 ~~d~~~~l~~~~~~LkpgG~l~i~~ 215 (340)
+- -++..+.+|+|+.|+-+.
T Consensus 315 lI-----~~e~l~~MK~GAILINvG 334 (464)
T 3n58_A 315 VI-----TIDHMRKMKDMCIVGNIG 334 (464)
T ss_dssp SB-----CHHHHHHSCTTEEEEECS
T ss_pred cc-----CHHHHhcCCCCeEEEEcC
Confidence 32 256778889998876543
No 472
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=80.64 E-value=20 Score=29.54 Aligned_cols=74 Identities=15% Similarity=0.150 Sum_probs=46.7
Q ss_pred CCCEEEEEcCccchHHHHHHHhC--CCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC-----C-CCCCccEEEe
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHV--DAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP-----F-PTDYADRYVS 184 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~--~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~-----~-~~~~fD~v~~ 184 (340)
.+++||-.|++. ..+..+++.+ .+.+|+++|.++...+...+.. .+++++.+|+.+.. + ..+..|+|+.
T Consensus 6 ~~~~vlVTGasg-giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~ 82 (244)
T 1cyd_A 6 SGLRALVTGAGK-GIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC--PGIEPVCVDLGDWDATEKALGGIGPVDLLVN 82 (244)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS--TTCEEEECCTTCHHHHHHHHTTCCCCSEEEE
T ss_pred CCCEEEEeCCCc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc--cCCCcEEecCCCHHHHHHHHHHcCCCCEEEE
Confidence 467888777644 4443333332 3789999999887666554432 35677888886521 1 1245899998
Q ss_pred cCccc
Q 019479 185 AGSIE 189 (340)
Q Consensus 185 ~~~l~ 189 (340)
+....
T Consensus 83 ~Ag~~ 87 (244)
T 1cyd_A 83 NAALV 87 (244)
T ss_dssp CCCCC
T ss_pred CCccc
Confidence 76543
No 473
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=80.23 E-value=1.3 Score=33.88 Aligned_cols=41 Identities=12% Similarity=-0.057 Sum_probs=30.5
Q ss_pred CCCCCCccEEEecCccc-c-cCCHHHHHHHHHHhcccCcEEEE
Q 019479 173 PFPTDYADRYVSAGSIE-Y-WPDPQRGIKEAYRVLKIGGKACV 213 (340)
Q Consensus 173 ~~~~~~fD~v~~~~~l~-~-~~d~~~~l~~~~~~LkpgG~l~i 213 (340)
.++..+||.|+.-.--. . ..=+..++..+.+.|||||+|..
T Consensus 54 sLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 54 TLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred cCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 45788999998743322 1 22337899999999999999975
No 474
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=80.16 E-value=4.5 Score=34.36 Aligned_cols=75 Identities=15% Similarity=0.134 Sum_probs=49.0
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCCCCC----------CC
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAEDLPF----------PT 176 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~~~~----------~~ 176 (340)
.++++|-.|++.|. .+..++++ +.+|+.+|.+++..+.+.+.. ...++.++.+|+.+... .-
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARA--GANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEF 86 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 56788877766542 34444444 789999999988776655432 22468889999976320 01
Q ss_pred CCccEEEecCccc
Q 019479 177 DYADRYVSAGSIE 189 (340)
Q Consensus 177 ~~fD~v~~~~~l~ 189 (340)
+..|+++.+....
T Consensus 87 g~id~lvnnAg~~ 99 (262)
T 3pk0_A 87 GGIDVVCANAGVF 99 (262)
T ss_dssp SCCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689999876543
No 475
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=80.05 E-value=11 Score=32.07 Aligned_cols=75 Identities=13% Similarity=0.095 Sum_probs=47.9
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHh----CCCCCcEEEEcCCCCCC------CCCCCc
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQK----EPLKECTIIEGDAEDLP------FPTDYA 179 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~----~~~~~i~~~~~d~~~~~------~~~~~f 179 (340)
.++++|-.|++.|. .+..+++. +.+|+.+|.+++..+...+. .....+.++..|+.+.. -.-+..
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~i 86 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAE--GANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKV 86 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCC
Confidence 56788888876542 34444554 78999999998766554433 22345677888886521 012468
Q ss_pred cEEEecCccc
Q 019479 180 DRYVSAGSIE 189 (340)
Q Consensus 180 D~v~~~~~l~ 189 (340)
|+++.+....
T Consensus 87 d~lv~nAg~~ 96 (267)
T 3t4x_A 87 DILINNLGIF 96 (267)
T ss_dssp SEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999876554
No 476
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=79.70 E-value=5.9 Score=33.65 Aligned_cols=103 Identities=16% Similarity=0.126 Sum_probs=60.3
Q ss_pred CCCEEEEEcCccchHHHHHHHhC--CCceEEEEeCCH---HHHHHHHHh--CCCCCcEEEEcCCCCCC-----C-----C
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHV--DAKNVTILDQSP---HQLAKAKQK--EPLKECTIIEGDAEDLP-----F-----P 175 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~--~~~~v~g~D~s~---~~~~~a~~~--~~~~~i~~~~~d~~~~~-----~-----~ 175 (340)
.++++|-.|++.| .+..+++.+ .+.+|+.++.+. +.++...+. ....++.++.+|+.+.. + .
T Consensus 10 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 88 (262)
T 3ksu_A 10 KNKVIVIAGGIKN-LGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE 88 (262)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 5778888887665 344444432 268999987643 333333322 12346788899997632 0 0
Q ss_pred CCCccEEEecCcccccC-----CHH--------------HHHHHHHHhcccCcEEEEEcc
Q 019479 176 TDYADRYVSAGSIEYWP-----DPQ--------------RGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 176 ~~~fD~v~~~~~l~~~~-----d~~--------------~~l~~~~~~LkpgG~l~i~~~ 216 (340)
-+..|+++.+..+.... +.+ .+.+.+.+.|+++|+++.+..
T Consensus 89 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS 148 (262)
T 3ksu_A 89 FGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIAT 148 (262)
T ss_dssp HCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECC
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEec
Confidence 14689999876543221 111 344556666777888887754
No 477
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=79.55 E-value=23 Score=29.21 Aligned_cols=73 Identities=16% Similarity=0.209 Sum_probs=46.5
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCC-----C-CCCCccEEE
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLP-----F-PTDYADRYV 183 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~-----~-~~~~fD~v~ 183 (340)
++++||-.|++.|. .+..++++ +.+|++++.++..++...+.. .+++++.+|+.+.. + .-+..|+++
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~id~vi 81 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHAT--GARVVAVSRTQADLDSLVREC--PGIEPVCVDLGDWEATERALGSVGPVDLLV 81 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHS--TTCEEEECCTTCHHHHHHHHTTCCCCCEEE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHc--CCCCEEEEeCCCHHHHHHHHHHcCCCCEEE
Confidence 56788888775442 23334443 789999999887766554433 35677788886521 1 124589999
Q ss_pred ecCccc
Q 019479 184 SAGSIE 189 (340)
Q Consensus 184 ~~~~l~ 189 (340)
.+....
T Consensus 82 ~~Ag~~ 87 (244)
T 3d3w_A 82 NNAAVA 87 (244)
T ss_dssp ECCCCC
T ss_pred ECCccC
Confidence 876543
No 478
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=79.37 E-value=5.5 Score=34.00 Aligned_cols=102 Identities=17% Similarity=0.188 Sum_probs=61.7
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEe-CCHHHHHHHHHh--CCCCCcEEEEcCCCCCC-----C-----CC
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILD-QSPHQLAKAKQK--EPLKECTIIEGDAEDLP-----F-----PT 176 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D-~s~~~~~~a~~~--~~~~~i~~~~~d~~~~~-----~-----~~ 176 (340)
.++++|-.|++.|. .+..+++. +.+|+.++ .++...+...+. ....++.++.+|+.+.. + .-
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~--G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 103 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASD--GFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF 103 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHH--TCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 57889888887663 45556666 78888874 344444433322 12246788899997632 0 01
Q ss_pred CCccEEEecCcccccCC--------HH-----------HHHHHHHHhcccCcEEEEEcc
Q 019479 177 DYADRYVSAGSIEYWPD--------PQ-----------RGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 177 ~~fD~v~~~~~l~~~~d--------~~-----------~~l~~~~~~LkpgG~l~i~~~ 216 (340)
+..|+++.+..+..... ++ .+++.+.+.++++|+++.+..
T Consensus 104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS 162 (267)
T 3u5t_A 104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMST 162 (267)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence 46899998765543211 11 345667777888898887753
No 479
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=79.26 E-value=11 Score=32.24 Aligned_cols=76 Identities=18% Similarity=0.194 Sum_probs=48.4
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHh-CCCCCcEEEEcCCCCCC----C-----CCCCc
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQK-EPLKECTIIEGDAEDLP----F-----PTDYA 179 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~-~~~~~i~~~~~d~~~~~----~-----~~~~f 179 (340)
.++++|-.|++.|. .+..+++. +.+|+.+|.++...+.+.+. ....++.++.+|+.+.. + ..+..
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~i 107 (273)
T 3uf0_A 30 AGRTAVVTGAGSGIGRAIAHGYARA--GAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRV 107 (273)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCC
Confidence 57889988887653 44555555 78999999665444444332 22346788899987632 1 01468
Q ss_pred cEEEecCcccc
Q 019479 180 DRYVSAGSIEY 190 (340)
Q Consensus 180 D~v~~~~~l~~ 190 (340)
|+++.+.....
T Consensus 108 D~lv~nAg~~~ 118 (273)
T 3uf0_A 108 DVLVNNAGIIA 118 (273)
T ss_dssp CEEEECCCCCC
T ss_pred cEEEECCCCCC
Confidence 99998765543
No 480
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=79.21 E-value=18 Score=30.85 Aligned_cols=74 Identities=8% Similarity=0.013 Sum_probs=47.9
Q ss_pred CCCEEEEEcCc----cch-HHHHHHHhCCCceEEEEeCCH--HHHHHHHHhCCCCCcEEEEcCCCCCC----------CC
Q 019479 113 RNMRVVDVGGG----TGF-TTLGIVKHVDAKNVTILDQSP--HQLAKAKQKEPLKECTIIEGDAEDLP----------FP 175 (340)
Q Consensus 113 ~~~~vLDiGcG----~G~-~~~~l~~~~~~~~v~g~D~s~--~~~~~a~~~~~~~~i~~~~~d~~~~~----------~~ 175 (340)
.+++||-.|++ -|. .+..+++. +.+|+.+|.++ +.++...+.. .++.++.+|+.+.. -.
T Consensus 25 ~~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~ 100 (280)
T 3nrc_A 25 AGKKILITGLLSNKSIAYGIAKAMHRE--GAELAFTYVGQFKDRVEKLCAEF--NPAAVLPCDVISDQEIKDLFVELGKV 100 (280)
T ss_dssp TTCEEEECCCCSTTCHHHHHHHHHHHT--TCEEEEEECTTCHHHHHHHHGGG--CCSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHc--CCEEEEeeCchHHHHHHHHHHhc--CCceEEEeecCCHHHHHHHHHHHHHH
Confidence 57889988843 333 45555555 78999999877 4444443332 35788999996632 01
Q ss_pred CCCccEEEecCcccc
Q 019479 176 TDYADRYVSAGSIEY 190 (340)
Q Consensus 176 ~~~fD~v~~~~~l~~ 190 (340)
-+..|+++.+..+..
T Consensus 101 ~g~id~li~nAg~~~ 115 (280)
T 3nrc_A 101 WDGLDAIVHSIAFAP 115 (280)
T ss_dssp CSSCCEEEECCCCCC
T ss_pred cCCCCEEEECCccCC
Confidence 146899998766543
No 481
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=79.16 E-value=11 Score=32.53 Aligned_cols=75 Identities=15% Similarity=0.134 Sum_probs=47.5
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC---CCCcEEEEcCCCCCC----------CCC
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP---LKECTIIEGDAEDLP----------FPT 176 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~---~~~i~~~~~d~~~~~----------~~~ 176 (340)
.+++||-.|++.|. .+..+++. +.+|+++|.++...+...+... ..++.++.+|+.+.. -..
T Consensus 25 ~~k~vlITGasggiG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (302)
T 1w6u_A 25 QGKVAFITGGGTGLGKGMTTLLSSL--GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA 102 (302)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 46788888865442 33344444 7899999998876655443211 246888999986532 011
Q ss_pred CCccEEEecCccc
Q 019479 177 DYADRYVSAGSIE 189 (340)
Q Consensus 177 ~~fD~v~~~~~l~ 189 (340)
+..|+++.+....
T Consensus 103 g~id~li~~Ag~~ 115 (302)
T 1w6u_A 103 GHPNIVINNAAGN 115 (302)
T ss_dssp CSCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3579999876643
No 482
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=79.16 E-value=12 Score=32.06 Aligned_cols=74 Identities=15% Similarity=0.152 Sum_probs=47.1
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeC-CHHHHHHHHHhC--CCCCcEEEEcCCCCCCC----------CC
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQ-SPHQLAKAKQKE--PLKECTIIEGDAEDLPF----------PT 176 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~-s~~~~~~a~~~~--~~~~i~~~~~d~~~~~~----------~~ 176 (340)
.++++|-.|++.|. .+..+++. +.+|+.+|. +++..+...+.. ...++.++.+|+.+... .-
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 105 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALAAS--GFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF 105 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC--CCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 56788888876653 34455554 789999995 665554443321 23568889999976321 01
Q ss_pred CCccEEEecCcc
Q 019479 177 DYADRYVSAGSI 188 (340)
Q Consensus 177 ~~fD~v~~~~~l 188 (340)
+..|+++.+..+
T Consensus 106 g~iD~lvnnAg~ 117 (280)
T 4da9_A 106 GRIDCLVNNAGI 117 (280)
T ss_dssp SCCCEEEEECC-
T ss_pred CCCCEEEECCCc
Confidence 368999987655
No 483
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=78.69 E-value=15 Score=31.70 Aligned_cols=75 Identities=12% Similarity=0.212 Sum_probs=48.3
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCC------------HHHHHHHHHh--CCCCCcEEEEcCCCCCC--
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQS------------PHQLAKAKQK--EPLKECTIIEGDAEDLP-- 173 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s------------~~~~~~a~~~--~~~~~i~~~~~d~~~~~-- 173 (340)
.++++|-.|++.|. .+..+++. +.+|+++|.+ ++.++.+.+. ....++.++..|+.+..
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 104 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLARE--GADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAM 104 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence 57889988887663 44555555 8899999987 4444443322 12356888999997632
Q ss_pred ---C-----CCCCccEEEecCccc
Q 019479 174 ---F-----PTDYADRYVSAGSIE 189 (340)
Q Consensus 174 ---~-----~~~~fD~v~~~~~l~ 189 (340)
+ .-+..|+++.+..+.
T Consensus 105 ~~~~~~~~~~~g~iD~lv~nAg~~ 128 (299)
T 3t7c_A 105 QAAVDDGVTQLGRLDIVLANAALA 128 (299)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHhCCCCEEEECCCCC
Confidence 0 014689999876543
No 484
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=78.68 E-value=9.3 Score=32.54 Aligned_cols=75 Identities=9% Similarity=0.039 Sum_probs=48.5
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhC--CCCCcEEEEcCCCCCC-----CC------C
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKE--PLKECTIIEGDAEDLP-----FP------T 176 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~--~~~~i~~~~~d~~~~~-----~~------~ 176 (340)
.++++|-.|++.|. .+..+++. +.+|+++|.+++.++...+.. ...++.++.+|+.+.. +. +
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 97 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGL--GARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD 97 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCcchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 56788888876542 33444444 789999999987665544321 1246788889986532 00 1
Q ss_pred CCccEEEecCccc
Q 019479 177 DYADRYVSAGSIE 189 (340)
Q Consensus 177 ~~fD~v~~~~~l~ 189 (340)
+..|+++.+....
T Consensus 98 g~id~lv~nAg~~ 110 (273)
T 1ae1_A 98 GKLNILVNNAGVV 110 (273)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCcEEEECCCCC
Confidence 5689999876553
No 485
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=78.65 E-value=3.8 Score=35.03 Aligned_cols=75 Identities=15% Similarity=0.190 Sum_probs=45.7
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---C--CCCcEEEEcCCCCCC-----CC----
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---P--LKECTIIEGDAEDLP-----FP---- 175 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~--~~~i~~~~~d~~~~~-----~~---- 175 (340)
.+++||-.|++.|. .+..++++ +.+|++++.+++.++...+.. . ..++.++.+|+.+.. +.
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (278)
T 1spx_A 5 AEKVAIITGSSNGIGRATAVLFARE--GAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG 82 (278)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence 45678777765442 33344444 789999999987766554332 1 235788889986532 00
Q ss_pred -CCCccEEEecCccc
Q 019479 176 -TDYADRYVSAGSIE 189 (340)
Q Consensus 176 -~~~fD~v~~~~~l~ 189 (340)
-+..|+++.+....
T Consensus 83 ~~g~id~lv~~Ag~~ 97 (278)
T 1spx_A 83 KFGKLDILVNNAGAA 97 (278)
T ss_dssp HHSCCCEEEECCC--
T ss_pred HcCCCCEEEECCCCC
Confidence 13689998876543
No 486
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=78.51 E-value=50 Score=32.92 Aligned_cols=45 Identities=16% Similarity=0.175 Sum_probs=35.1
Q ss_pred CCCEEEEEcCccchHHHHHHHhC--C---CceEEEEeCCHHHHHHHHHhC
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHV--D---AKNVTILDQSPHQLAKAKQKE 157 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~--~---~~~v~g~D~s~~~~~~a~~~~ 157 (340)
+..+|+|+=||.|.++.-+.+.- . -..+.++|+++.+++.-+.+.
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 45689999999999988876651 0 025679999999998888764
No 487
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=77.85 E-value=10 Score=31.96 Aligned_cols=75 Identities=11% Similarity=0.067 Sum_probs=47.9
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhC--CCCCcEEEEcCCCCCC-----CC------C
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKE--PLKECTIIEGDAEDLP-----FP------T 176 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~--~~~~i~~~~~d~~~~~-----~~------~ 176 (340)
.+++||-.|++.|. .+..++++ +.+|+++|.+++..+...+.. ...++.++.+|+.+.. +. .
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASL--GASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH 85 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46788888875542 33444444 789999999887665544321 1245778889986531 00 1
Q ss_pred CCccEEEecCccc
Q 019479 177 DYADRYVSAGSIE 189 (340)
Q Consensus 177 ~~fD~v~~~~~l~ 189 (340)
+..|+++.+....
T Consensus 86 g~id~lv~~Ag~~ 98 (260)
T 2ae2_A 86 GKLNILVNNAGIV 98 (260)
T ss_dssp TCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 5689999876543
No 488
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=77.79 E-value=23 Score=31.14 Aligned_cols=59 Identities=8% Similarity=0.066 Sum_probs=37.2
Q ss_pred CCCEEEEEcCccchHHHHHHHhC--CCceEEEEe-CCHHHHHHHHHhC---CCCCcEEEEcCCCCC
Q 019479 113 RNMRVVDVGGGTGFTTLGIVKHV--DAKNVTILD-QSPHQLAKAKQKE---PLKECTIIEGDAEDL 172 (340)
Q Consensus 113 ~~~~vLDiGcG~G~~~~~l~~~~--~~~~v~g~D-~s~~~~~~a~~~~---~~~~i~~~~~d~~~~ 172 (340)
.++++|-.|++.| .+..+++.+ .+.+|++++ .+++.++.+.+.+ ...++.++.+|+.+.
T Consensus 45 ~~k~~lVTGas~G-IG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~ 109 (328)
T 2qhx_A 45 TVPVALVTGAAKR-LGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNV 109 (328)
T ss_dssp CCCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSS
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCc
Confidence 4567877766544 333333332 278999999 8887666554332 124688889998764
No 489
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=77.68 E-value=26 Score=28.31 Aligned_cols=133 Identities=10% Similarity=0.062 Sum_probs=68.1
Q ss_pred CEEEEEcCcc--ch-HHHHHHHhCCCceEEEEeCCHH-HHHHHHHhCCCCCcEEEEcCCCCCC---CCCCCccEEEecCc
Q 019479 115 MRVVDVGGGT--GF-TTLGIVKHVDAKNVTILDQSPH-QLAKAKQKEPLKECTIIEGDAEDLP---FPTDYADRYVSAGS 187 (340)
Q Consensus 115 ~~vLDiGcG~--G~-~~~~l~~~~~~~~v~g~D~s~~-~~~~a~~~~~~~~i~~~~~d~~~~~---~~~~~fD~v~~~~~ 187 (340)
++||-.|+.. |. .+..+++. .+.+|++++.++. .++...+ ...++.++.+|+.+.. -.-...|+|+.+..
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~-~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag 82 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTY-TDMHITLYGRQLKTRIPPEII--DHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAM 82 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHH-CCCEEEEEESSHHHHSCHHHH--TSTTEEEEECCTTCHHHHHHHHTTCSEEEESCC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhc-CCceEEEEecCccccchhhcc--CCCceEEEECCCCCHHHHHHHHcCCCEEEEcCC
Confidence 4588787432 32 23333412 3789999999876 4443321 2357889999997522 01135799998765
Q ss_pred ccccCCHHHHHHHHHHhccc-C-cEEEEEccCCC----chhHhhHhhhHh--hcCCCHHHHHHHHHHCCCcEEEEE
Q 019479 188 IEYWPDPQRGIKEAYRVLKI-G-GKACVIGPVYP----TFWLSRFFADVW--MLFPKEEEYIEWFQKAGFKDVKLK 255 (340)
Q Consensus 188 l~~~~d~~~~l~~~~~~Lkp-g-G~l~i~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~l~~aGF~~v~~~ 255 (340)
...+. .+.+.+.++. | |+++.+..... ............ ....+....+.++++.|+...-+.
T Consensus 83 ~~n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~vr 153 (221)
T 3r6d_A 83 ESGSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTILR 153 (221)
T ss_dssp CCHHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHHSCSEEEEEE
T ss_pred CCChh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHHhCCCCEEEEe
Confidence 44332 4444444433 2 56665532211 011111100000 011134566778888888755433
No 490
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=77.44 E-value=6.2 Score=34.19 Aligned_cols=59 Identities=22% Similarity=0.041 Sum_probs=37.7
Q ss_pred CCcEEE-EcCCCCCCCCCCCccEEEec----Ccccc-c--CCHH----HHHHHHHHhcccCcEEEEEccCCC
Q 019479 160 KECTII-EGDAEDLPFPTDYADRYVSA----GSIEY-W--PDPQ----RGIKEAYRVLKIGGKACVIGPVYP 219 (340)
Q Consensus 160 ~~i~~~-~~d~~~~~~~~~~fD~v~~~----~~l~~-~--~d~~----~~l~~~~~~LkpgG~l~i~~~~~~ 219 (340)
++.++. ..|+...+ ..+++|+|++. ...|| - .|.. -+++-+.++|+|||.+++......
T Consensus 188 ~GAt~~~~lDfg~p~-~~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvygga 258 (320)
T 2hwk_A 188 PEATFRARLDLGIPG-DVPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYA 258 (320)
T ss_dssp TTCSEECCGGGCSCT-TSCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCC
T ss_pred CCceeecccccCCcc-ccCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 344555 66765532 33679999985 33344 2 2332 346677889999999998876544
No 491
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=77.42 E-value=14 Score=31.11 Aligned_cols=74 Identities=12% Similarity=0.205 Sum_probs=46.4
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEE-eCCHHHHHHHHHhC--CCCCcEEEEcCCCCCC-----C-----CC
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTIL-DQSPHQLAKAKQKE--PLKECTIIEGDAEDLP-----F-----PT 176 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~-D~s~~~~~~a~~~~--~~~~i~~~~~d~~~~~-----~-----~~ 176 (340)
.++++|-.|++.|. .+..++++ +.+|+.+ +.++...+...+.. ...++.++.+|+.+.. + .-
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~--G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAEN--GYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF 80 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46778877766542 33444444 7888886 78877666554432 2346888999997632 0 01
Q ss_pred CCccEEEecCcc
Q 019479 177 DYADRYVSAGSI 188 (340)
Q Consensus 177 ~~fD~v~~~~~l 188 (340)
+..|+++.+...
T Consensus 81 g~id~lv~nAg~ 92 (258)
T 3oid_A 81 GRLDVFVNNAAS 92 (258)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 367999987654
No 492
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=77.39 E-value=5.8 Score=34.47 Aligned_cols=74 Identities=18% Similarity=0.216 Sum_probs=46.3
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhC--CCC---CcEEEEcCCCCCC-----CC----
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKE--PLK---ECTIIEGDAEDLP-----FP---- 175 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~--~~~---~i~~~~~d~~~~~-----~~---- 175 (340)
.++++|-.|++.|. .+..+++. +.+|+++|.+++.++...+.. ... ++.++.+|+.+.. +.
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 102 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKE--GAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA 102 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 46778877765442 33344444 789999999987665544321 112 6788899986532 00
Q ss_pred -CCCccEEEecCcc
Q 019479 176 -TDYADRYVSAGSI 188 (340)
Q Consensus 176 -~~~fD~v~~~~~l 188 (340)
-+..|+++.+...
T Consensus 103 ~~g~iD~lvnnAG~ 116 (297)
T 1xhl_A 103 KFGKIDILVNNAGA 116 (297)
T ss_dssp HHSCCCEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 1368999987654
No 493
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=77.38 E-value=8.7 Score=32.84 Aligned_cols=74 Identities=19% Similarity=0.255 Sum_probs=48.1
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhC---CCCCcEEEEcCCCCCC-----C-----CC
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKE---PLKECTIIEGDAEDLP-----F-----PT 176 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~---~~~~i~~~~~d~~~~~-----~-----~~ 176 (340)
.++++|-.|++.|. .+..++++ +.+|+.+|.+.+..+.+.+.. ...++.++.+|+.+.. + .-
T Consensus 26 ~~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 103 (277)
T 4fc7_A 26 RDKVAFITGGGSGIGFRIAEIFMRH--GCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF 103 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 57888888876653 33444444 789999999987665544332 1256888999996632 0 01
Q ss_pred CCccEEEecCcc
Q 019479 177 DYADRYVSAGSI 188 (340)
Q Consensus 177 ~~fD~v~~~~~l 188 (340)
+..|+++.+...
T Consensus 104 g~id~lv~nAg~ 115 (277)
T 4fc7_A 104 GRIDILINCAAG 115 (277)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCcC
Confidence 368999987654
No 494
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=76.83 E-value=8.2 Score=32.98 Aligned_cols=75 Identities=15% Similarity=0.146 Sum_probs=49.4
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhC--CCCCcEEEEcCCCCCC----------CCCC
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKE--PLKECTIIEGDAEDLP----------FPTD 177 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~--~~~~i~~~~~d~~~~~----------~~~~ 177 (340)
.++++|-.|++.|. .+..+++. +.+|+.+|.+++..+...+.. ...++.++.+|+.+.. ...+
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVA--GARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGI 102 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 57788887776552 34444554 789999999987776655432 2246788888986532 0123
Q ss_pred CccEEEecCccc
Q 019479 178 YADRYVSAGSIE 189 (340)
Q Consensus 178 ~fD~v~~~~~l~ 189 (340)
..|+++.+..+.
T Consensus 103 ~iD~lv~nAg~~ 114 (271)
T 4ibo_A 103 DVDILVNNAGIQ 114 (271)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999876654
No 495
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=76.74 E-value=15 Score=31.53 Aligned_cols=84 Identities=18% Similarity=0.159 Sum_probs=51.2
Q ss_pred CEEEEEcC-cc-ch-HHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCCcEEEEcCCCCCCCCCCCccEEEecCccccc
Q 019479 115 MRVVDVGG-GT-GF-TTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECTIIEGDAEDLPFPTDYADRYVSAGSIEYW 191 (340)
Q Consensus 115 ~~vLDiGc-G~-G~-~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 191 (340)
.+|.=||+ |. |. ++..+++. +.+|+++|.+++..+.+.+. ++.. .+..+ .-...|+|+..---..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~----g~~~--~~~~~---~~~~aDvVi~av~~~~- 79 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDS--AHHLAAIEIAPEGRDRLQGM----GIPL--TDGDG---WIDEADVVVLALPDNI- 79 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHS--SSEEEEECCSHHHHHHHHHT----TCCC--CCSSG---GGGTCSEEEECSCHHH-
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHhc----CCCc--CCHHH---HhcCCCEEEEcCCchH-
Confidence 48999999 74 33 34444444 67999999999888777652 1221 12211 1235799997543222
Q ss_pred CCHHHHHHHHHHhcccCcEEE
Q 019479 192 PDPQRGIKEAYRVLKIGGKAC 212 (340)
Q Consensus 192 ~d~~~~l~~~~~~LkpgG~l~ 212 (340)
...+++++...+++|..++
T Consensus 80 --~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 80 --IEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp --HHHHHHHHGGGSCTTCEEE
T ss_pred --HHHHHHHHHHhCCCCCEEE
Confidence 3466777777777766443
No 496
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=76.60 E-value=19 Score=30.56 Aligned_cols=75 Identities=11% Similarity=0.104 Sum_probs=46.2
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhC----CCCCcEEEEcCCCCCC-----CC-----
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKE----PLKECTIIEGDAEDLP-----FP----- 175 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~----~~~~i~~~~~d~~~~~-----~~----- 175 (340)
.+++||-.|++.|. .+..+++. +.+|++++.++..++...+.. ...++.++.+|+.+.. +.
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQQ--GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 108 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 46788888765442 23334444 789999999887665544321 1235778889986532 00
Q ss_pred CCCccEEEecCccc
Q 019479 176 TDYADRYVSAGSIE 189 (340)
Q Consensus 176 ~~~fD~v~~~~~l~ 189 (340)
.+.+|+|+.+....
T Consensus 109 ~g~iD~vi~~Ag~~ 122 (279)
T 1xg5_A 109 HSGVDICINNAGLA 122 (279)
T ss_dssp HCCCSEEEECCCCC
T ss_pred CCCCCEEEECCCCC
Confidence 13689999876543
No 497
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=76.31 E-value=13 Score=31.51 Aligned_cols=102 Identities=11% Similarity=0.052 Sum_probs=58.8
Q ss_pred CCCEEEEEcCc-cchHHHHHHHhC--CCceEEEEeCCHH---HHHHHHHhCCCCCcEEEEcCCCCCC-----C-----CC
Q 019479 113 RNMRVVDVGGG-TGFTTLGIVKHV--DAKNVTILDQSPH---QLAKAKQKEPLKECTIIEGDAEDLP-----F-----PT 176 (340)
Q Consensus 113 ~~~~vLDiGcG-~G~~~~~l~~~~--~~~~v~g~D~s~~---~~~~a~~~~~~~~i~~~~~d~~~~~-----~-----~~ 176 (340)
.+++||-.|++ +|..+..+++.+ .+.+|+.++.++. .++...+.. .++.++.+|+.+.. + .-
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQEL--NSPYVYELDVSKEEHFKSLYNSVKKDL 82 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHT--TCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46789989875 244444444332 2789999998775 333333222 23678889986532 0 11
Q ss_pred CCccEEEecCccccc---------CCHH--------------HHHHHHHHhcccCcEEEEEcc
Q 019479 177 DYADRYVSAGSIEYW---------PDPQ--------------RGIKEAYRVLKIGGKACVIGP 216 (340)
Q Consensus 177 ~~fD~v~~~~~l~~~---------~d~~--------------~~l~~~~~~LkpgG~l~i~~~ 216 (340)
+..|+++.+...... .+.+ .+.+.+.+.++++|+++.+..
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 145 (275)
T 2pd4_A 83 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSY 145 (275)
T ss_dssp SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred CCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEec
Confidence 368999987654321 0111 234555666666788877643
No 498
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=76.23 E-value=9.2 Score=33.52 Aligned_cols=75 Identities=17% Similarity=0.236 Sum_probs=46.9
Q ss_pred CCCEEEEEcCccch---HHHHHHHhCCCceEEEEeCC------------HHHHHHHHHh--CCCCCcEEEEcCCCCCC--
Q 019479 113 RNMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQS------------PHQLAKAKQK--EPLKECTIIEGDAEDLP-- 173 (340)
Q Consensus 113 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s------------~~~~~~a~~~--~~~~~i~~~~~d~~~~~-- 173 (340)
.++++|-.|++.|. .+..+++. +.+|+++|.+ ++.++...+. ....++.++.+|+.+..
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la~~--G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v 122 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLAQD--GADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASL 122 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 56788888876653 34455554 7899999986 4444433322 12356888899996532
Q ss_pred ---C-----CCCCccEEEecCccc
Q 019479 174 ---F-----PTDYADRYVSAGSIE 189 (340)
Q Consensus 174 ---~-----~~~~fD~v~~~~~l~ 189 (340)
+ .-+..|+++.+-.+.
T Consensus 123 ~~~~~~~~~~~g~iD~lVnnAg~~ 146 (317)
T 3oec_A 123 QAVVDEALAEFGHIDILVSNVGIS 146 (317)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC
Confidence 0 013689999876554
No 499
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=75.82 E-value=11 Score=34.99 Aligned_cols=95 Identities=13% Similarity=0.047 Sum_probs=54.2
Q ss_pred CEEEEEcCcc-c-hHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC----------------CCCcEEEEcCCCCCCCCC
Q 019479 115 MRVVDVGGGT-G-FTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEP----------------LKECTIIEGDAEDLPFPT 176 (340)
Q Consensus 115 ~~vLDiGcG~-G-~~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~~----------------~~~i~~~~~d~~~~~~~~ 176 (340)
.+|.-||+|. | .++..+++. +.+|+++|.+++.++..++... ..++.+ ..|..+ .-
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~--G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~-t~d~~e---a~ 76 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL--GANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF-GTEIEQ---AV 76 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE-ESCHHH---HG
T ss_pred CEEEEECcCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE-ECCHHH---HH
Confidence 4788898874 2 234444554 7899999999998888775311 012222 223221 01
Q ss_pred CCccEEEecCcccc----cC---CHHHHHHHHHHhcccCcEEEEEc
Q 019479 177 DYADRYVSAGSIEY----WP---DPQRGIKEAYRVLKIGGKACVIG 215 (340)
Q Consensus 177 ~~fD~v~~~~~l~~----~~---d~~~~l~~~~~~LkpgG~l~i~~ 215 (340)
...|+|+..-.-.. -+ ....+++.+.+.|++|-.++...
T Consensus 77 ~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S 122 (450)
T 3gg2_A 77 PEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS 122 (450)
T ss_dssp GGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred hcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee
Confidence 24688886432110 01 23467788888888765554443
No 500
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=75.66 E-value=11 Score=31.73 Aligned_cols=73 Identities=18% Similarity=0.177 Sum_probs=45.5
Q ss_pred CCEEEEEcCccch---HHHHHHHhCCCceEEEEeCCHHHHHHHHHhC--CCCCcEEEEcCCCCCC-----C-----CCCC
Q 019479 114 NMRVVDVGGGTGF---TTLGIVKHVDAKNVTILDQSPHQLAKAKQKE--PLKECTIIEGDAEDLP-----F-----PTDY 178 (340)
Q Consensus 114 ~~~vLDiGcG~G~---~~~~l~~~~~~~~v~g~D~s~~~~~~a~~~~--~~~~i~~~~~d~~~~~-----~-----~~~~ 178 (340)
++++|-.|++.|. .+..++++ +.+|+++|.+++..+...+.. ...++.++.+|+.+.. + .-+.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 79 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKD--GFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGG 79 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 3567777765542 33444444 789999999887665544321 1246788889986532 0 0136
Q ss_pred ccEEEecCcc
Q 019479 179 ADRYVSAGSI 188 (340)
Q Consensus 179 fD~v~~~~~l 188 (340)
.|+++.+...
T Consensus 80 id~lv~nAg~ 89 (256)
T 1geg_A 80 FDVIVNNAGV 89 (256)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999987654
Done!